Amblyraja radiata isolate CabotCenter1 chromosome 11, sAmbRad1.1.pri, whole genome shotgun sequence.
type: Entry
definition: Amblyraja radiata isolate CabotCenter1 chromosome 11, sAmbRad1.1.pri, whole genome shotgun sequence.
sequence version: NC_045966.1
sequence date: 2021-04-05
sequence: sequence
division: CON
label: NC_045966.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA610638
dblink: SAMN09948523
keyword: WGS
keyword: RefSeq
source: Amblyraja radiata (thorny skate)
organism: Amblyraja radiata
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Batoidea; Rajiformes; Rajidae; Amblyraja.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM021376.1.\nAssembly name: sAmbRad1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/02/21. The original whole-genome shotgun project has the\naccession JAAGWR000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 13-JAN-2020\nAssembly Method :: Canu v. 1.7; purge_haplotigs v. bitbucket\n 7.10.2018; scaff10x v. 4.1.0; Bionano\n Solve DLS v. 3.3; Salsa HiC v. 2.2; Arrow\n smrtanalysis Pacbio polishing & gap\n filling v. 5.1.0.26412; longranger align\n v. 2.2.2; freebayes Illumina polishing v.\n 1.3.1; purge_dups v.\n ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b;\n gEVAL manual curation v. 2020-01-13; VGP\n assembly pipeline v. 1.5\nAssembly Name :: sAmbRad1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 128.24x\nSequencing Technology :: PacBio Sequel; Illumina NovaSeq; Arima\n Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Updated annotation\nAnnotation Name :: Amblyraja radiata Updated Annotation\n Release 100.20210331\nAnnotation Version :: 100.20210331\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.6\nAnnotation Method :: Best-placed RefSeq; propagated\n RefSeq model\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 66065264
topology: linear
so has quality: SO_0000987
location: 1..66065264
location: region:1-66065264:1
RO_0002162: 386614

NC_045966
type: RefSeq
SIO_000068: refseq

PRJNA610638
type: BioProject
SIO_000068: bioproject

SAMN09948523
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66065264:1
position: 66065264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-66065264:1:source
so part of: sequence
organism: Amblyraja radiata
mol type: genomic DNA
isolate: CabotCenter1
chromosome: 11
sex: male
tissue type: testis, liver
country: USA: Gulf of Main
lat lon: 43.1336 N 68.3266 W
collection date: 2017-09-18
collected by: Jeff Kneebone

386614
type: Taxonomy
SIO_000068: taxonomy

LOC116978748
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116978748
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 52364..53608
location: region:52364-53608:1
so has part: feature:52364-53608:1:exon
subclass of: SO_0000010

116978748
type: Gene
SIO_000068: ncbigene

position:52364:1
position: 52364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53608:1
position: 53608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52364-53608:1:exon

LOC116978748
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116978748
product: protein FAM187B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_033030053.1
SIO_010081: LOC116978748
subclass of: SO_0000673
so part of: LOC116978748
location: 52364..53608
location: region:52364-53608:1
so has part: feature:52364-53608:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:52364-53608:1:exon

LOC116978748
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116978748
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM187B-like
translation: MWNENVLLFILGMLFLIGGLPNFLNQDDWANCSGKAPCSLAFLSNNPLSLRCPSATEVPAGSVYWQYQDLSQPQAQPSTFITSGHLTVYQGPMGDLGSRADLHRGSLIMDTAKTSDTGLYLCKSANSTLAAYQVDVQDSSLVYVSHQGLGQSILTNQTLRVNVGSSQHMVKLYTRWGPWQECNRCNVIGEQKVMGFCYAKLSYTDKDEDEDEALEVNGITLPCGLMELFIGQSLPRRGAELHYQWCRQPCKKEQQPLEIAANLLLLEIGEWWRWWCGREPVFDWMEPRTTLVQSTYHGIRDNARMTCPGASVYTPVLWQRDSTFITQGGSSDGRHRLVDAMGGMYEIKSVMPSDRGIYRCWVHGRRVASFHIETPEKSVVHRPVNRRLLRRVTTIVGTIAMVFIISAVVEILHT
SIO_010081: LOC116978748
subclass of: SO_0000673
so part of: LOC116978748
location: 52364..53608
location: region:52364-53608:1
so has part: feature:52364-53608:1:exon

XP_032885944.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52364-53608:1:exon

LOC116978749
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116978749
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 83758..85002
location: region:83758-85002:1
so has part: feature:83758-85002:1:exon
subclass of: SO_0000010

116978749
type: Gene
SIO_000068: ncbigene

position:83758:1
position: 83758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85002:1
position: 85002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83758-85002:1:exon

LOC116978749
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116978749
product: protein FAM187B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_033030054.1
SIO_010081: LOC116978749
subclass of: SO_0000673
so part of: LOC116978749
location: 83758..85002
location: region:83758-85002:1
so has part: feature:83758-85002:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:83758-85002:1:exon

LOC116978749
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116978749
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM187B-like
translation: MWNENVLLFILGMLFLIGGLPNFLNQDDWANCSGKAPCSLAFLSSNPLSLRCPSATEVPAGSVYWQYQDLSQPQTQPSTFITSGHLTVYQGPMGDLGSRADLHRGSLIMDTAKTSDTGLYLCKSANSTLAAYQVDVQDSSLVYVSHQGLGQSILTNQTLRVNVGSSQHMVKLYTRWGPWQECNRCNVIGEQKVMGFCYAKLSYTAKDEDEDEALEVNGITLPCGLMELFIGQSLPRRGAELHYQWCRQPCKKEQQPLEIAANLLLLEIGEWWRWWCGREPVFDWMEPRTTLVQSTYHGIRDNARMTCPGASVYTPVLWQRDSTFITQGGSSDGRHRLVDAMGGMYEIKSVMPSDRGIYRCWVHGRRVASFHIETPEKPVVHRPINRRLLRRVTTIVGTIAMVFIISAVVEILHT
SIO_010081: LOC116978749
subclass of: SO_0000673
so part of: LOC116978749
location: 83758..85002
location: region:83758-85002:1
so has part: feature:83758-85002:1:exon

XP_032885945.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83758-85002:1:exon

LOC116978750
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116978750
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 196792..198036
location: region:196792-198036:1
so has part: feature:196792-198036:1:exon
subclass of: SO_0000010

116978750
type: Gene
SIO_000068: ncbigene

position:196792:1
position: 196792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198036:1
position: 198036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196792-198036:1:exon

LOC116978750
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116978750
product: protein FAM187B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_033030055.1
SIO_010081: LOC116978750
subclass of: SO_0000673
so part of: LOC116978750
location: 196792..198036
location: region:196792-198036:1
so has part: feature:196792-198036:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:196792-198036:1:exon

LOC116978750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116978750
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM187B-like
translation: MWNENVLLFILGMLFLIGGLPNFLNQDDWANCSGKAPCSLAFLSNNPLSLRCPSATEVPAGSVYWQYQDLSQPQAQPSTFITSGHLTVYQGPMGDLGSRADLHRGSLIMDTAKTSDTGLYLCKSANSTLAAYQVDVQDSSLVYVSHQGLGESILTNQTLRVNVGSSQHMVKLYTRWGPWQECNRCNVIGEQKVMGFCYAKLSYTDKDEDEDEALEVNGITLPCGLMELFIGQSLPRRGAELHYQWCRQPCKKEQQPLEIAANLLLLEIGEWWRWWCGREPVFDWMEPRTTLVQSTYHGIRDNARMTCPGASVYTPVLWQRDSTFITQGGSSDGRHRLVDAMGGMYEIKSVMPSDRGIYRCWVHGRRVASFHIETPEKPVVHRPVNRRLLRRVTTIVGTIAMVFIISAVVEILHT
SIO_010081: LOC116978750
subclass of: SO_0000673
so part of: LOC116978750
location: 196792..198036
location: region:196792-198036:1
so has part: feature:196792-198036:1:exon

XP_032885946.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:196792-198036:1:exon

LOC116978752
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116978752
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(246103..247347)
location: region:246103-247347:-1
so has part: feature:246103-247347:-1:exon
subclass of: SO_0000010

116978752
type: Gene
SIO_000068: ncbigene

position:246103:-1
position: 246103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247347:-1
position: 247347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246103-247347:-1:exon

LOC116978752
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116978752
product: protein FAM187B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_033030056.1
SIO_010081: LOC116978752
subclass of: SO_0000673
so part of: LOC116978752
location: complement(246103..247347)
location: region:246103-247347:-1
so has part: feature:246103-247347:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:246103-247347:-1:exon

LOC116978752
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116978752
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM187B-like
translation: MWNENVLLFILGMLFLIGGLPNFLNQDDWANCSGKAPCSLAFLSNNPLSLRCPSATEVPAGSVYWQYQDLSQPQAQPSTFITSGHLTVYQGPMGDLGSRADLHRGSLIMDTAKTSDTGLYLCKSANSTLAAYQVDVQDSSLVYVSHQGLGQSILTNQTLRVNVGSSQHMVKLYTRWGPWQECNRCNVIGEQKVMGFCYAKLSDIDKDEDEDEALEVNGITLPCGLMELFIGQSLPRRGAELHYQWCRQPCKKEQQPLEIAANLLLLEIGEWWRWWCGREPVFNWMEPRTTLVQSTYHGIRDNARMTCPGASVYTPVLWQRDSTFITQGGSSDGRHRLVDAMGGMYEIKSVMPSDRGIYRCWVHGRRVASFHIETPEKPVVHRPVNRRLLRRVTTIVGTIAMVFIISAVVEILHT
SIO_010081: LOC116978752
subclass of: SO_0000673
so part of: LOC116978752
location: complement(246103..247347)
location: region:246103-247347:-1
so has part: feature:246103-247347:-1:exon

XP_032885947.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:246103-247347:-1:exon

LOC116978753
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116978753
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(277329..278573)
location: region:277329-278573:-1
so has part: feature:277329-278573:-1:exon
subclass of: SO_0000010

116978753
type: Gene
SIO_000068: ncbigene

position:277329:-1
position: 277329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278573:-1
position: 278573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277329-278573:-1:exon

LOC116978753
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116978753
product: protein FAM187B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_033030057.1
SIO_010081: LOC116978753
subclass of: SO_0000673
so part of: LOC116978753
location: complement(277329..278573)
location: region:277329-278573:-1
so has part: feature:277329-278573:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:277329-278573:-1:exon

LOC116978753
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116978753
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM187B-like
translation: MWNENVLLFILGMLFLIGGLPNFLNQDDWANCSGKAPCSLAFLSNNPLSLRCPSATEVPAGSVYWQYQDLSQPQAQPSTFITSGHLTVYQGPMGDLGSRADLHRGSLIMDTAKTSDTGLYLCKSANSTLAAYQVDVQDSSLVYVSHQGLGESILTNQTLRVNVGSSQHMVKLYTRWGPWQECNRCNVIGEQKVMGFCYAKLNYIGKDEDEDEALEVNGITLPCGLMELFIGQSLPRRGAELHYQWCRQPCKKEQQPLEIAANLLLLEIGEWWRWWCGREPVFDWMEPRTTLVQSTYHGIRDNARMTCPGASVYTPVLWQRDSTFITQGGSSDGRHRLVDAMGGMYEIKSVMPSDRGIYRCWVHGRRVASFHIETPEKPVVHRPVNRRLLRRVTTIVGTIAMVFIISAVVEILHT
SIO_010081: LOC116978753
subclass of: SO_0000673
so part of: LOC116978753
location: complement(277329..278573)
location: region:277329-278573:-1
so has part: feature:277329-278573:-1:exon

XP_032885948.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:277329-278573:-1:exon

LOC116978754
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116978754
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(349215..350423)
location: region:349215-350423:-1
so has part: feature:349215-350423:-1:exon
subclass of: SO_0000010

116978754
type: Gene
SIO_000068: ncbigene

position:349215:-1
position: 349215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350423:-1
position: 350423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349215-350423:-1:exon

LOC116978754
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116978754
product: protein FAM187B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_033030058.1
SIO_010081: LOC116978754
subclass of: SO_0000673
so part of: LOC116978754
location: complement(349215..350423)
location: region:349215-350423:-1
so has part: feature:349215-350423:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:349215-350423:-1:exon

LOC116978754
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116978754
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM187B-like
translation: MLFLIGGLPNFLNQDDWANCSGKAPCSLAFLSNNPLSLRCPSATEVPAGSVYWQYQDLSQPQAQPSTFITSGHLTVYQGPMGDLGSRADLHRGSLIMDTAKTSDTGLYLCKSANSTLAAYQVDVQDSSLVYVSHQGLGESILTNQTLRVNVGSSQHMVKLYTRWGPWQECNRCNVIGEQKVMGFCYAKLSYTDKDEDEDEALEVNGITLPCGLMELFIGQSLPRRGAELHYQWCRQPCKKEQQPLEIAAKLLLLEIGEWWRWWCGREPVFDWMEPRTTLVQSTYHGIRDNARMTCPGASVYTPVLWQRDSTFITQGGSSDGRHRLVDAMGGMYEIKSVMPSDRGIYRCWVHGRRVASFHIETPEKPVVHRPVNRRLLRRVTTIVGTIAMVFIISAVVEILHT
SIO_010081: LOC116978754
subclass of: SO_0000673
so part of: LOC116978754
location: complement(349215..350423)
location: region:349215-350423:-1
so has part: feature:349215-350423:-1:exon

XP_032885949.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:349215-350423:-1:exon

LOC116978755
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116978755
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(404145..405389)
location: region:404145-405389:-1
so has part: feature:404145-405389:-1:exon
subclass of: SO_0000010

116978755
type: Gene
SIO_000068: ncbigene

position:404145:-1
position: 404145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:405389:-1
position: 405389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404145-405389:-1:exon

LOC116978755
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116978755
product: protein FAM187B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_033030060.1
SIO_010081: LOC116978755
subclass of: SO_0000673
so part of: LOC116978755
location: complement(404145..405389)
location: region:404145-405389:-1
so has part: feature:404145-405389:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:404145-405389:-1:exon

LOC116978755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116978755
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM187B-like
translation: MWNENVLLFILGMLFLIGGLPNFLNQDDWANCSGKAPCSLAFLSSNPLSLRCPSATEVPAGSVYWQYQDLSQPQAQPSTFITSGHLTVYQGPMGDLGSRADLHRGSLIMDTAKTSDTGLYLCKLANSTLAAYQVDVQDSSLVYVSHQGLGESILTNQTLRVNVGSSQHMVKLYTRWGPWQECNRCNVIGEQKVMGFCYAKLSYTDKDEDEDEALEVNGITLPCGLMELFIGQSLPRRGAELHYQWCRQPCKKEQQPLEVAANLLLLEIGEWWRWWCGREPVFDWMEPRTTLVQSTYHGIRDNARMTCPGASVYTPVLWQRDSTFITQGGSSDGRHRLVDAMGGMYEIKSVMPSDRGIYRCWVHGRRVASFHIETPEKPVVHRPVNRRLLRRVTTIVGTIAMVFIISAVVEILHT
SIO_010081: LOC116978755
subclass of: SO_0000673
so part of: LOC116978755
location: complement(404145..405389)
location: region:404145-405389:-1
so has part: feature:404145-405389:-1:exon

XP_032885951.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:404145-405389:-1:exon

LOC116978198
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116978198
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 488653..505118
location: region:488653-505118:1
so has part: feature:488653-505118:1:exon
subclass of: SO_0000011

116978198
type: Gene
SIO_000068: ncbigene

position:488653:1
position: 488653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505118:1
position: 505118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:488653-505118:1:exon

LOC116978198
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116978198
product: uncharacterized LOC116978198
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004413416.1
SIO_010081: LOC116978198
subclass of: SO_0000673
so part of: LOC116978198
location: join(488653..488664,497255..497258,505082..505118)
location: region:488653-505118:1
so has part: feature:488653-488664:1:exon
so has part: feature:497255-497258:1:exon
so has part: feature:505082-505118:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:488653-488664:1:exon

position:488664:1
position: 488664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:497255-497258:1:exon

position:497255:1
position: 497255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497258:1
position: 497258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:505082-505118:1:exon

position:505082:1
position: 505082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116978199
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116978199
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 535692..575576
location: region:535692-575576:1
so has part: feature:535692-575576:1:exon
subclass of: SO_0000010

116978199
type: Gene
SIO_000068: ncbigene

position:535692:1
position: 535692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:575576:1
position: 575576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:535692-575576:1:exon

LOC116978199
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116978199
product: E3 ubiquitin-protein ligase RMND5A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_033029167.1
SIO_010081: LOC116978199
subclass of: SO_0000673
so part of: LOC116978199
location: join(535692..536256,551051..551196,553699..553836,556471..556571,556760..556926,562277..562442,571741..571843,572015..572169,573068..575576)
location: region:535692-575576:1
so has part: feature:535692-536256:1:exon
so has part: feature:551051-551196:1:exon
so has part: feature:553699-553836:1:exon
so has part: feature:556471-556571:1:exon
so has part: feature:556760-556926:1:exon
so has part: feature:562277-562442:1:exon
so has part: feature:571741-571843:1:exon
so has part: feature:572015-572169:1:exon
so has part: feature:573068-575576:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:535692-536256:1:exon

position:536256:1
position: 536256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:551051-551196:1:exon

position:551051:1
position: 551051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:551196:1
position: 551196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:553699-553836:1:exon

position:553699:1
position: 553699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553836:1
position: 553836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:556471-556571:1:exon

position:556471:1
position: 556471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556571:1
position: 556571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:556760-556926:1:exon

position:556760:1
position: 556760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556926:1
position: 556926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:562277-562442:1:exon

position:562277:1
position: 562277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562442:1
position: 562442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:571741-571843:1:exon

position:571741:1
position: 571741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571843:1
position: 571843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:572015-572169:1:exon

position:572015:1
position: 572015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:572169:1
position: 572169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:573068-575576:1:exon

position:573068:1
position: 573068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116978199
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116978199
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RMND5A-like
translation: MDQCVCVERELEKVLHKFLMYGQHCDRSLEELLHYVSGLRQELSNTGHLDLQLSATLSLVMSQCCKKIKDTVLKLALDHKDIHASVSKVGKAIDRNFDTDVSGVGVEGVWDLHEKQQFLSEVVVGHLYRQGLLSVAEELCQESGICIDLCQKKPFLELNRILEALRLRDLRPALEWTMSNRQRLLALDSTLEFKLHRLYFISLLTGGIVNQTEALGYAKNFQPFAQQHQRDIQVLMGSLVYLRHGISNSPYLHLLDSTQWADICDIFTRDACALLGLSVESPLSVSFSAGCLALPVLLNIKAVIEQRQCTGIWSQKDELPVEIELGKKCWYHSVFACPILRQQATESNPPMKLICGHVISRDALNKLINSGKLKCPYCPMEQAPSDAKQIYF
SIO_010081: LOC116978199
subclass of: SO_0000673
so part of: LOC116978199
location: join(536118..536256,551051..551196,553699..553836,556471..556571,556760..556926,562277..562442,571741..571843,572015..572169,573068..573131)
location: region:536118-573131:1
so has part: feature:536118-536256:1:exon
so has part: feature:551051-551196:1:exon
so has part: feature:553699-553836:1:exon
so has part: feature:556471-556571:1:exon
so has part: feature:556760-556926:1:exon
so has part: feature:562277-562442:1:exon
so has part: feature:571741-571843:1:exon
so has part: feature:572015-572169:1:exon
so has part: feature:573068-573131:1:exon

XP_032885058.1
type: Protein
SIO_000068: ncbiprotein

position:536118:1
position: 536118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573131:1
position: 573131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:536118-536256:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:551051-551196:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:553699-553836:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:556471-556571:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:556760-556926:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:562277-562442:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:571741-571843:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:572015-572169:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:573068-573131:1:exon

LOC116978200
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116978200
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(548714..568402)
location: region:548714-568402:-1
so has part: feature:548714-568402:-1:exon
subclass of: SO_0000011

116978200
type: Gene
SIO_000068: ncbigene

position:548714:-1
position: 548714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:568402:-1
position: 568402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548714-568402:-1:exon

LOC116978200
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116978200
product: uncharacterized LOC116978200
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004413417.1
SIO_010081: LOC116978200
subclass of: SO_0000673
so part of: LOC116978200
location: complement(join(548714..548757,567866..567868,568391..568402))
location: region:548714-568402:-1
so has part: feature:568391-568402:-1:exon
so has part: feature:567866-567868:-1:exon
so has part: feature:548714-548757:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:568391-568402:-1:exon

position:568391:-1
position: 568391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:567866-567868:-1:exon

position:567866:-1
position: 567866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:567868:-1
position: 567868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:548714-548757:-1:exon

position:548757:-1
position: 548757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116978756
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116978756
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(581222..592364)
location: region:581222-592364:-1
so has part: feature:581222-592364:-1:exon
subclass of: SO_0000010

116978756
type: Gene
SIO_000068: ncbigene

position:581222:-1
position: 581222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592364:-1
position: 592364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:581222-592364:-1:exon

LOC116978756
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116978756
product: E3 ubiquitin-protein ligase NEURL1-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 55% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033030061.1
SIO_010081: LOC116978756
subclass of: SO_0000673
so part of: LOC116978756
location: complement(join(581222..581776,592208..592364))
location: region:581222-592364:-1
so has part: feature:592208-592364:-1:exon
so has part: feature:581222-581776:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:592208-592364:-1:exon

position:592208:-1
position: 592208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:581222-581776:-1:exon

position:581776:-1
position: 581776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116978756
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116978756
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase NEURL1-like
translation: MGSPSAAVAHGKGPLHDPTLMGDWALTLSHKRISTDDGGFLRPISRDKLPGDEQEQRNNRLSICDRSTRLYLKPTTSDDRLFFHPSTKGLQIKLDSSHQNAWRXSGFCNGITFSNCPVLIQEKVRLTITKVDVTWNGALRLGCTIFNPSIMDPSALPKFICPDLEDVYGFWAKALPQXYVQEGVVISFWVNNQGFFMYSVNEGREYLLMKELLVAHPLWVIVNVYGTTCGVQLQGKE
SIO_010081: LOC116978756
subclass of: SO_0000673
so part of: LOC116978756
location: complement(join(581222..581776,592208..592364))
location: region:581222-592364:-1
so has part: feature:592208-592364:-1:exon
so has part: feature:581222-581776:-1:exon

XP_032885952.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:592208-592364:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:581222-581776:-1:exon

kdm3b
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: kdm3b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(605430..723596)
location: region:605430-723596:-1
so has part: feature:605430-723596:-1:exon
subclass of: SO_0000010

116978201
type: Gene
SIO_000068: ncbigene

position:605430:-1
position: 605430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:723596:-1
position: 723596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:605430-723596:-1:exon

kdm3b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: kdm3b
product: lysine demethylase 3B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_033029169.1
SIO_010081: kdm3b
subclass of: SO_0000673
so part of: kdm3b
location: complement(join(605430..608906,615557..615691,616289..616465,618079..618218,626533..626652,627904..628034,628111..628201,635917..636088,637931..638200,639859..640118,642999..643329,651692..651819,652910..653017,653899..654051,656175..656389,661042..661243,665522..666891,676218..676336,678755..679479,680329..680425,681604..681735,682185..682309,691593..691695,695663..695776,696052..696219,723276..723596))
location: region:605430-723596:-1
so has part: feature:723276-723596:-1:exon
so has part: feature:696052-696219:-1:exon
so has part: feature:695663-695776:-1:exon
so has part: feature:691593-691695:-1:exon
so has part: feature:682185-682309:-1:exon
so has part: feature:681604-681735:-1:exon
so has part: feature:680329-680425:-1:exon
so has part: feature:678755-679479:-1:exon
so has part: feature:676218-676336:-1:exon
so has part: feature:665522-666891:-1:exon
so has part: feature:661042-661243:-1:exon
so has part: feature:656175-656389:-1:exon
so has part: feature:653899-654051:-1:exon
so has part: feature:652910-653017:-1:exon
so has part: feature:651692-651819:-1:exon
so has part: feature:642999-643329:-1:exon
so has part: feature:639859-640118:-1:exon
so has part: feature:637931-638200:-1:exon
so has part: feature:635917-636088:-1:exon
so has part: feature:628111-628201:-1:exon
so has part: feature:627904-628034:-1:exon
so has part: feature:626533-626652:-1:exon
so has part: feature:618079-618218:-1:exon
so has part: feature:616289-616465:-1:exon
so has part: feature:615557-615691:-1:exon
so has part: feature:605430-608906:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:723276-723596:-1:exon

position:723276:-1
position: 723276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:696052-696219:-1:exon

position:696052:-1
position: 696052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:696219:-1
position: 696219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:695663-695776:-1:exon

position:695663:-1
position: 695663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:695776:-1
position: 695776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:691593-691695:-1:exon

position:691593:-1
position: 691593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:691695:-1
position: 691695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:682185-682309:-1:exon

position:682185:-1
position: 682185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682309:-1
position: 682309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:681604-681735:-1:exon

position:681604:-1
position: 681604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:681735:-1
position: 681735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:680329-680425:-1:exon

position:680329:-1
position: 680329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:680425:-1
position: 680425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:678755-679479:-1:exon

position:678755:-1
position: 678755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:679479:-1
position: 679479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:676218-676336:-1:exon

position:676218:-1
position: 676218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:676336:-1
position: 676336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:665522-666891:-1:exon

position:665522:-1
position: 665522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:666891:-1
position: 666891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:661042-661243:-1:exon

position:661042:-1
position: 661042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:661243:-1
position: 661243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:656175-656389:-1:exon

position:656175:-1
position: 656175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:656389:-1
position: 656389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:653899-654051:-1:exon

position:653899:-1
position: 653899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:654051:-1
position: 654051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:652910-653017:-1:exon

position:652910:-1
position: 652910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:653017:-1
position: 653017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:651692-651819:-1:exon

position:651692:-1
position: 651692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:651819:-1
position: 651819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:642999-643329:-1:exon

position:642999:-1
position: 642999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:643329:-1
position: 643329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:639859-640118:-1:exon

position:639859:-1
position: 639859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:640118:-1
position: 640118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:637931-638200:-1:exon

position:637931:-1
position: 637931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638200:-1
position: 638200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:635917-636088:-1:exon

position:635917:-1
position: 635917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:636088:-1
position: 636088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:628111-628201:-1:exon

position:628111:-1
position: 628111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:628201:-1
position: 628201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:627904-628034:-1:exon

position:627904:-1
position: 627904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:628034:-1
position: 628034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:626533-626652:-1:exon

position:626533:-1
position: 626533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:626652:-1
position: 626652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:618079-618218:-1:exon

position:618079:-1
position: 618079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:618218:-1
position: 618218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:616289-616465:-1:exon

position:616289:-1
position: 616289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616465:-1
position: 616465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:615557-615691:-1:exon

position:615557:-1
position: 615557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615691:-1
position: 615691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:605430-608906:-1:exon

position:608906:-1
position: 608906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

kdm3b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: kdm3b
product: lysine demethylase 3B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_033029168.1
SIO_010081: kdm3b
subclass of: SO_0000673
so part of: kdm3b
location: complement(join(605430..608906,615557..615691,616289..616465,618079..618218,622584..622607,626533..626652,627904..628034,628111..628201,635917..636088,637931..638200,639859..640118,642999..643329,651692..651819,652910..653017,653899..654051,656175..656389,661042..661243,665522..666891,676218..676336,678755..679479,680329..680425,681604..681735,682185..682309,691593..691695,695663..695776,696052..696219,723276..723596))
location: region:605430-723596:-1
so has part: feature:723276-723596:-1:exon
so has part: feature:696052-696219:-1:exon
so has part: feature:695663-695776:-1:exon
so has part: feature:691593-691695:-1:exon
so has part: feature:682185-682309:-1:exon
so has part: feature:681604-681735:-1:exon
so has part: feature:680329-680425:-1:exon
so has part: feature:678755-679479:-1:exon
so has part: feature:676218-676336:-1:exon
so has part: feature:665522-666891:-1:exon
so has part: feature:661042-661243:-1:exon
so has part: feature:656175-656389:-1:exon
so has part: feature:653899-654051:-1:exon
so has part: feature:652910-653017:-1:exon
so has part: feature:651692-651819:-1:exon
so has part: feature:642999-643329:-1:exon
so has part: feature:639859-640118:-1:exon
so has part: feature:637931-638200:-1:exon
so has part: feature:635917-636088:-1:exon
so has part: feature:628111-628201:-1:exon
so has part: feature:627904-628034:-1:exon
so has part: feature:626533-626652:-1:exon
so has part: feature:622584-622607:-1:exon
so has part: feature:618079-618218:-1:exon
so has part: feature:616289-616465:-1:exon
so has part: feature:615557-615691:-1:exon
so has part: feature:605430-608906:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:723276-723596:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:696052-696219:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:695663-695776:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:691593-691695:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:682185-682309:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:681604-681735:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:680329-680425:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:678755-679479:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:676218-676336:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:665522-666891:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:661042-661243:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:656175-656389:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:653899-654051:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:652910-653017:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:651692-651819:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:642999-643329:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:639859-640118:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:637931-638200:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:635917-636088:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:628111-628201:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:627904-628034:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:626533-626652:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:622584-622607:-1:exon

position:622584:-1
position: 622584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:622607:-1
position: 622607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:618079-618218:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:616289-616465:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:615557-615691:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:605430-608906:-1:exon

kdm3b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: kdm3b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine-specific demethylase 3B isoform X2
translation: MATAGTELTGKRLLCLFGDSASGGPGPGPGQQQPPSLLDGDWHAGLIRVVIPGPSLAVYVEFDDSRWKKQAWVKVYAEDVLVFLVEHTLVWAPRKEPIHLQGGRIHANQWPALTYKALVDKIGLGSIVPVEFFGDRVKNFATDGANLRLFKEDSDIHNPIVQENLKLQEAMKSWMKEKKIQEIIRGPYSLQGHRVKIYQPDSSEEWILAVVAHHDPSASIMVVTTEQEQQRKTIDLMRIYITLVDETLQLMKGETGIPCKSSGTNESSTSMVAQKQASQNSRNRRKKAEGSPPYSPTKEPDEKDKNKDSRRRKNAADGENEPVQKKVKDKEEIESDSSSVCSLGAGGNGHNQPKNDNPDVEQGNFDSKRVDDLSWGVADSASDRSRFVPQPQAGLRYATYTKENGRTLVVQDEPIHGKPFVPTAAAAAAAGSAVPRISGVPFANAESLNPQSKKGLPISDSGRASEVPTVEPSNFVQDSTGADTEAFVGAGLSEHGIKENLDVNSETQQKSQNIMSESTNESPTCASVNPGNFPAPQDRLQSTFQGVKSLQTSSLAPVSENSLGNSSPLEYSIGQQAEVCSTAKGEPSKKWLEDPSQTRKEGVSTEDGAVQISDKNETLMEESKRNGNEGTNGAFVQESKAFGFGFGRNAADLPGSKAGNKNSVDLGSLSNNLFFQCMPQNVPQSNYFTAISESLSNHPLSFNSFKVASNATGQKHVTTQAIGTPAVGLNPGGKPGQDSEKKKPLGTSEVMPTLTPAFPRSSSSLQFLQSVQPPDLLKEEMPTIPSANSFLRFADLKGNGNVLPTNRSHSSLFRSDVTRSMACNPASVIVKPPLLTNWKKTDKITSDVGGNKTDLPKIFSSPFSSPTQKTTSLNTARPDSPETQFGATNIEMPTLSTSPTGDRVSGFSIPISGSATQDNPQLRVFSDTTHSGKPQQAAFTFSSSDNGVDGPSCQQSQFDQRRFALDERSLGIKQESDSASDSDLSDLSDSEVHMRLQSKTGLKGYLSYVHERREPNGEGNKEQIGKGRGRGRGRPRGRPPKISVDQSVLKDLCKVRKLKQSGESFLQDGSCINVAPHLHKCRECRLVRYRKFKDHDESTVSCRFFHFRKLAFTRTGVLRVGGFLNPRQCDGEALSLWIPSRIPAEGLDLETSKYILANVGDQFCQLVMSEKEALLLVEPHQQLAWKRAVRGIREMCDACETTLFNIHWVCRKCGFGVCLDCYRMRKSRPPQEDDDSLEDEVFSWLKCAKGQTHDPVNLMPTQIIPSTALYDIGDMVHATRGKWGIKANCPCITKQLKPLPKPAPPNGVSQLSTNLPNPAPAIILNEVSVSGGSSVMLPQSDGSLAEVKAESADIRNCEAGEASNVNLADDHCNNMSFASDNEAFSTTSTLKDTTLSSADTTSALHWLADLATQKAKEEKKENSNSLRSVLSQNQDSKPPLALDSFNALSKPPSILEPFSSLLSGGPSSTKSEGSSLRDLLNSAPGNLQRCAAETNLPFPSVFTSVATTEKGKGGLPNFLDHIIASVVENKMSTDPSKRSGNSTEAMKETKKQGVMEMSVLDPNTQHCWLCDGRLLCLQDPSNQNNWKIFRECWKQGQPVLVSGVHKKLNAALWKPEAFSKEFGDQEVDLVNCRNCAIISDVKVRDFWDGFEIIAKRLKSEEGHPMVLKLKDWPPGEDFRDMMPTRFDDLMNNLPLPEYTKRDGRLNLASRLPNYFVRPDLGPKMYNAYGLITTEDRKVGTTNLHLDVSDAVNVMVYVGIPIGESNHEEEVMKTIEEGDVDEVTKKRIHKSKEKAGALWHIYAAKDAEKIRELLRKVSEEQGQDNPPDHDPIHDQSWYLDQTLRKRLYEEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQEFRHLSNTHTNHEDKLQVKNIIYHAVKDAVGTLKSEEPRLGKS
SIO_010081: kdm3b
subclass of: SO_0000673
so part of: kdm3b
location: complement(join(608826..608906,615557..615691,616289..616465,618079..618218,626533..626652,627904..628034,628111..628201,635917..636088,637931..638200,639859..640118,642999..643329,651692..651819,652910..653017,653899..654051,656175..656389,661042..661243,665522..666891,676218..676336,678755..679479,680329..680425,681604..681735,682185..682309,691593..691695,695663..695776,696052..696219,723276..723446))
location: region:608826-723446:-1
so has part: feature:723276-723446:-1:exon
so has part: feature:696052-696219:-1:exon
so has part: feature:695663-695776:-1:exon
so has part: feature:691593-691695:-1:exon
so has part: feature:682185-682309:-1:exon
so has part: feature:681604-681735:-1:exon
so has part: feature:680329-680425:-1:exon
so has part: feature:678755-679479:-1:exon
so has part: feature:676218-676336:-1:exon
so has part: feature:665522-666891:-1:exon
so has part: feature:661042-661243:-1:exon
so has part: feature:656175-656389:-1:exon
so has part: feature:653899-654051:-1:exon
so has part: feature:652910-653017:-1:exon
so has part: feature:651692-651819:-1:exon
so has part: feature:642999-643329:-1:exon
so has part: feature:639859-640118:-1:exon
so has part: feature:637931-638200:-1:exon
so has part: feature:635917-636088:-1:exon
so has part: feature:628111-628201:-1:exon
so has part: feature:627904-628034:-1:exon
so has part: feature:626533-626652:-1:exon
so has part: feature:618079-618218:-1:exon
so has part: feature:616289-616465:-1:exon
so has part: feature:615557-615691:-1:exon
so has part: feature:608826-608906:-1:exon

XP_032885060.1
type: Protein
SIO_000068: ncbiprotein

position:608826:-1
position: 608826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:723446:-1
position: 723446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:723276-723446:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:696052-696219:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:695663-695776:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:691593-691695:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:682185-682309:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:681604-681735:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:680329-680425:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:678755-679479:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:676218-676336:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:665522-666891:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:661042-661243:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:656175-656389:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:653899-654051:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:652910-653017:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:651692-651819:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:642999-643329:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:639859-640118:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:637931-638200:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:635917-636088:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:628111-628201:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:627904-628034:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:626533-626652:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:618079-618218:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:616289-616465:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:615557-615691:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:608826-608906:-1:exon

kdm3b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: kdm3b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine-specific demethylase 3B isoform X1
translation: MATAGTELTGKRLLCLFGDSASGGPGPGPGQQQPPSLLDGDWHAGLIRVVIPGPSLAVYVEFDDSRWKKQAWVKVYAEDVLVFLVEHTLVWAPRKEPIHLQGGRIHANQWPALTYKALVDKIGLGSIVPVEFFGDRVKNFATDGANLRLFKEDSDIHNPIVQENLKLQEAMKSWMKEKKIQEIIRGPYSLQGHRVKIYQPDSSEEWILAVVAHHDPSASIMVVTTEQEQQRKTIDLMRIYITLVDETLQLMKGETGIPCKSSGTNESSTSMVAQKQASQNSRNRRKKAEGSPPYSPTKEPDEKDKNKDSRRRKNAADGENEPVQKKVKDKEEIESDSSSVCSLGAGGNGHNQPKNDNPDVEQGNFDSKRVDDLSWGVADSASDRSRFVPQPQAGLRYATYTKENGRTLVVQDEPIHGKPFVPTAAAAAAAGSAVPRISGVPFANAESLNPQSKKGLPISDSGRASEVPTVEPSNFVQDSTGADTEAFVGAGLSEHGIKENLDVNSETQQKSQNIMSESTNESPTCASVNPGNFPAPQDRLQSTFQGVKSLQTSSLAPVSENSLGNSSPLEYSIGQQAEVCSTAKGEPSKKWLEDPSQTRKEGVSTEDGAVQISDKNETLMEESKRNGNEGTNGAFVQESKAFGFGFGRNAADLPGSKAGNKNSVDLGSLSNNLFFQCMPQNVPQSNYFTAISESLSNHPLSFNSFKVASNATGQKHVTTQAIGTPAVGLNPGGKPGQDSEKKKPLGTSEVMPTLTPAFPRSSSSLQFLQSVQPPDLLKEEMPTIPSANSFLRFADLKGNGNVLPTNRSHSSLFRSDVTRSMACNPASVIVKPPLLTNWKKTDKITSDVGGNKTDLPKIFSSPFSSPTQKTTSLNTARPDSPETQFGATNIEMPTLSTSPTGDRVSGFSIPISGSATQDNPQLRVFSDTTHSGKPQQAAFTFSSSDNGVDGPSCQQSQFDQRRFALDERSLGIKQESDSASDSDLSDLSDSEVHMRLQSKTGLKGYLSYVHERREPNGEGNKEQIGKGRGRGRGRPRGRPPKISVDQSVLKDLCKVRKLKQSGESFLQDGSCINVAPHLHKCRECRLVRYRKFKDHDESTVSCRFFHFRKLAFTRTGVLRVGGFLNPRQCDGEALSLWIPSRIPAEGLDLETSKYILANVGDQFCQLVMSEKEALLLVEPHQQLAWKRAVRGIREMCDACETTLFNIHWVCRKCGFGVCLDCYRMRKSRPPQEDDDSLEDEVFSWLKCAKGQTHDPVNLMPTQIIPSTALYDIGDMVHATRGKWGIKANCPCITKQLKPLPKPAPPNGVSQLSTNLPNPAPAIILNEVSVSGGSSVMLPQSDGSLAEVKAESADIRNCEAGEASNVNLADDHCNNMSFASDNEAFSTTSTLKDTTLSSADTTSALHWLADLATQKAKEEKKENSNSLRSVLSQNQDSKPPLALDSFNALSKPPSILEPFSSLLSGGPSSTKSEGSSLRDLLNSAPGNLQRCAAETNLPFPSVFTSVATTEKGKGGLPNFLDHIIASVVENKMSTDPSKRSGNSTEAMKETKKQGVMEMSVLDPNTQHCWLCDGRLLCLQDPSNQNNWKIFRECWKQGQPVLVSGVHKKLNAALWKPEAFSKEFGDQEVDLVNCRNCAIISDVKVRDFWDGFEIIAKRLKSEEGHPMVLKLKDWPPGEDFRDMMPTRFDDLMNNLPLPEYTKRDGRLNLASRLPNYFVRPDLGPKMYNAYGLITTEDRKVGTTNLHLDVSDAVNVMVYVGIPIGESNHEEDTDNSGVAEVMKTIEEGDVDEVTKKRIHKSKEKAGALWHIYAAKDAEKIRELLRKVSEEQGQDNPPDHDPIHDQSWYLDQTLRKRLYEEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQEFRHLSNTHTNHEDKLQVKNIIYHAVKDAVGTLKSEEPRLGKS
SIO_010081: kdm3b
subclass of: SO_0000673
so part of: kdm3b
location: complement(join(608826..608906,615557..615691,616289..616465,618079..618218,622584..622607,626533..626652,627904..628034,628111..628201,635917..636088,637931..638200,639859..640118,642999..643329,651692..651819,652910..653017,653899..654051,656175..656389,661042..661243,665522..666891,676218..676336,678755..679479,680329..680425,681604..681735,682185..682309,691593..691695,695663..695776,696052..696219,723276..723446))
location: region:608826-723446:-1
so has part: feature:723276-723446:-1:exon
so has part: feature:696052-696219:-1:exon
so has part: feature:695663-695776:-1:exon
so has part: feature:691593-691695:-1:exon
so has part: feature:682185-682309:-1:exon
so has part: feature:681604-681735:-1:exon
so has part: feature:680329-680425:-1:exon
so has part: feature:678755-679479:-1:exon
so has part: feature:676218-676336:-1:exon
so has part: feature:665522-666891:-1:exon
so has part: feature:661042-661243:-1:exon
so has part: feature:656175-656389:-1:exon
so has part: feature:653899-654051:-1:exon
so has part: feature:652910-653017:-1:exon
so has part: feature:651692-651819:-1:exon
so has part: feature:642999-643329:-1:exon
so has part: feature:639859-640118:-1:exon
so has part: feature:637931-638200:-1:exon
so has part: feature:635917-636088:-1:exon
so has part: feature:628111-628201:-1:exon
so has part: feature:627904-628034:-1:exon
so has part: feature:626533-626652:-1:exon
so has part: feature:622584-622607:-1:exon
so has part: feature:618079-618218:-1:exon
so has part: feature:616289-616465:-1:exon
so has part: feature:615557-615691:-1:exon
so has part: feature:608826-608906:-1:exon

XP_032885059.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:723276-723446:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:696052-696219:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:695663-695776:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:691593-691695:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:682185-682309:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:681604-681735:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:680329-680425:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:678755-679479:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:676218-676336:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:665522-666891:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:661042-661243:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:656175-656389:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:653899-654051:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:652910-653017:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:651692-651819:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:642999-643329:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:639859-640118:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:637931-638200:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:635917-636088:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:628111-628201:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:627904-628034:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:626533-626652:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:622584-622607:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:618079-618218:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:616289-616465:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:615557-615691:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:608826-608906:-1:exon

reep2
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: reep2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 748894..809447
location: region:748894-809447:1
so has part: feature:748894-809447:1:exon
subclass of: SO_0000010

116978202
type: Gene
SIO_000068: ncbigene

position:748894:1
position: 748894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:809447:1
position: 809447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:748894-809447:1:exon

reep2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: reep2
product: receptor accessory protein 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033029173.1
SIO_010081: reep2
subclass of: SO_0000673
so part of: reep2
location: join(748894..749004,749154..749279,787239..787311,790112..790188,792011..792131,793513..793626,797702..797849,805040..805188,807477..809447)
location: region:748894-809447:1
so has part: feature:748894-749004:1:exon
so has part: feature:749154-749279:1:exon
so has part: feature:787239-787311:1:exon
so has part: feature:790112-790188:1:exon
so has part: feature:792011-792131:1:exon
so has part: feature:793513-793626:1:exon
so has part: feature:797702-797849:1:exon
so has part: feature:805040-805188:1:exon
so has part: feature:807477-809447:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:748894-749004:1:exon

position:749004:1
position: 749004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:749154-749279:1:exon

position:749154:1
position: 749154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:749279:1
position: 749279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:787239-787311:1:exon

position:787239:1
position: 787239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:787311:1
position: 787311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:790112-790188:1:exon

position:790112:1
position: 790112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:790188:1
position: 790188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:792011-792131:1:exon

position:792011:1
position: 792011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:792131:1
position: 792131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:793513-793626:1:exon

position:793513:1
position: 793513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:793626:1
position: 793626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:797702-797849:1:exon

position:797702:1
position: 797702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:797849:1
position: 797849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:805040-805188:1:exon

position:805040:1
position: 805040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:805188:1
position: 805188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:807477-809447:1:exon

position:807477:1
position: 807477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

reep2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: reep2
product: receptor accessory protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033029170.1
SIO_010081: reep2
subclass of: SO_0000673
so part of: reep2
location: join(748897..749004,749154..749279,787239..787311,790112..790188,792011..792131,793513..793626,797702..797849,805019..805188,807477..809447)
location: region:748897-809447:1
so has part: feature:748897-749004:1:exon
so has part: feature:749154-749279:1:exon
so has part: feature:787239-787311:1:exon
so has part: feature:790112-790188:1:exon
so has part: feature:792011-792131:1:exon
so has part: feature:793513-793626:1:exon
so has part: feature:797702-797849:1:exon
so has part: feature:805019-805188:1:exon
so has part: feature:807477-809447:1:exon

position:748897:1
position: 748897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:748897-749004:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:749154-749279:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:787239-787311:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:790112-790188:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:792011-792131:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:793513-793626:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:797702-797849:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:805019-805188:1:exon

position:805019:1
position: 805019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:807477-809447:1:exon

reep2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: reep2
product: receptor accessory protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033029171.1
SIO_010081: reep2
subclass of: SO_0000673
so part of: reep2
location: join(749056..749279,787239..787311,790112..790188,792011..792131,793513..793626,797702..797849,805019..805188,807477..809447)
location: region:749056-809447:1
so has part: feature:749056-749279:1:exon
so has part: feature:787239-787311:1:exon
so has part: feature:790112-790188:1:exon
so has part: feature:792011-792131:1:exon
so has part: feature:793513-793626:1:exon
so has part: feature:797702-797849:1:exon
so has part: feature:805019-805188:1:exon
so has part: feature:807477-809447:1:exon

position:749056:1
position: 749056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:749056-749279:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:787239-787311:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:790112-790188:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:792011-792131:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:793513-793626:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:797702-797849:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:805019-805188:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:807477-809447:1:exon

reep2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: reep2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor expression-enhancing protein 2 isoform X1
translation: MVSWMISRLVVLIFGTLYPAYSSYKAVKTKNVKEYVKWMMYWIVFAFFTTVETLTDIILSWFPFYFELKMAFVIWLLSPYTKGSSVLYRKFVHPTLSSKEKEIDEYISQAKDRSYQTMMRFGKRGLNLAANVAVTAAAKGQGVLSDRLRSFSMQDLTLLRDEDSIHLRSTDPQMKTSSSNILETISDSDTHRLLSGEDVGNTQAQKSDGEQPDVKLEQADEEIMDKVPKRTQSLKSNKQKLQRLEPQSKSVKLRVKKKASSHTESA
SIO_010081: reep2
subclass of: SO_0000673
so part of: reep2
location: join(749248..749279,787239..787311,790112..790188,792011..792131,793513..793626,797702..797849,805019..805188,807477..807542)
location: region:749248-807542:1
so has part: feature:749248-749279:1:exon
so has part: feature:787239-787311:1:exon
so has part: feature:790112-790188:1:exon
so has part: feature:792011-792131:1:exon
so has part: feature:793513-793626:1:exon
so has part: feature:797702-797849:1:exon
so has part: feature:805019-805188:1:exon
so has part: feature:807477-807542:1:exon

XP_032885061.1
type: Protein
SIO_000068: ncbiprotein

position:749248:1
position: 749248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:807542:1
position: 807542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:749248-749279:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:787239-787311:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:790112-790188:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:792011-792131:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:793513-793626:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:797702-797849:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:805019-805188:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:807477-807542:1:exon

reep2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: reep2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor expression-enhancing protein 2 isoform X1
translation: MVSWMISRLVVLIFGTLYPAYSSYKAVKTKNVKEYVKWMMYWIVFAFFTTVETLTDIILSWFPFYFELKMAFVIWLLSPYTKGSSVLYRKFVHPTLSSKEKEIDEYISQAKDRSYQTMMRFGKRGLNLAANVAVTAAAKGQGVLSDRLRSFSMQDLTLLRDEDSIHLRSTDPQMKTSSSNILETISDSDTHRLLSGEDVGNTQAQKSDGEQPDVKLEQADEEIMDKVPKRTQSLKSNKQKLQRLEPQSKSVKLRVKKKASSHTESA
SIO_010081: reep2
subclass of: SO_0000673
so part of: reep2
location: join(749248..749279,787239..787311,790112..790188,792011..792131,793513..793626,797702..797849,805019..805188,807477..807542)
location: region:749248-807542:1
so has part: feature:749248-749279:1:exon
so has part: feature:787239-787311:1:exon
so has part: feature:790112-790188:1:exon
so has part: feature:792011-792131:1:exon
so has part: feature:793513-793626:1:exon
so has part: feature:797702-797849:1:exon
so has part: feature:805019-805188:1:exon
so has part: feature:807477-807542:1:exon

XP_032885062.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:749248-749279:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:787239-787311:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:790112-790188:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:792011-792131:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:793513-793626:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:797702-797849:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:805019-805188:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:807477-807542:1:exon

reep2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: reep2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor expression-enhancing protein 2 isoform X3
translation: MVSWMISRLVVLIFGTLYPAYSSYKAVKTKNVKEYVKWMMYWIVFAFFTTVETLTDIILSWFPFYFELKMAFVIWLLSPYTKGSSVLYRKFVHPTLSSKEKEIDEYISQAKDRSYQTMMRFGKRGLNLAANVAVTAAAKGQGVLSDRLRSFSMQDLTLLRDEDSIHLRSTDPQMKTSSSNILETISDSGEDVGNTQAQKSDGEQPDVKLEQADEEIMDKVPKRTQSLKSNKQKLQRLEPQSKSVKLRVKKKASSHTESA
SIO_010081: reep2
subclass of: SO_0000673
so part of: reep2
location: join(749248..749279,787239..787311,790112..790188,792011..792131,793513..793626,797702..797849,805040..805188,807477..807542)
location: region:749248-807542:1
so has part: feature:749248-749279:1:exon
so has part: feature:787239-787311:1:exon
so has part: feature:790112-790188:1:exon
so has part: feature:792011-792131:1:exon
so has part: feature:793513-793626:1:exon
so has part: feature:797702-797849:1:exon
so has part: feature:805040-805188:1:exon
so has part: feature:807477-807542:1:exon

XP_032885064.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:749248-749279:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:787239-787311:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:790112-790188:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:792011-792131:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:793513-793626:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:797702-797849:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:805040-805188:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:807477-807542:1:exon

reep2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: reep2
product: receptor accessory protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033029172.1
SIO_010081: reep2
subclass of: SO_0000673
so part of: reep2
location: join(784486..784551,787239..787311,790112..790188,792011..792131,793513..793626,797702..797849,805019..805188,807477..809447)
location: region:784486-809447:1
so has part: feature:784486-784551:1:exon
so has part: feature:787239-787311:1:exon
so has part: feature:790112-790188:1:exon
so has part: feature:792011-792131:1:exon
so has part: feature:793513-793626:1:exon
so has part: feature:797702-797849:1:exon
so has part: feature:805019-805188:1:exon
so has part: feature:807477-809447:1:exon

position:784486:1
position: 784486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:784486-784551:1:exon

position:784551:1
position: 784551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:787239-787311:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:790112-790188:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:792011-792131:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:793513-793626:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:797702-797849:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:805019-805188:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:807477-809447:1:exon

reep2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: reep2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor expression-enhancing protein 2 isoform X2
translation: MGAGRRIRLIFGTLYPAYSSYKAVKTKNVKEYVKWMMYWIVFAFFTTVETLTDIILSWFPFYFELKMAFVIWLLSPYTKGSSVLYRKFVHPTLSSKEKEIDEYISQAKDRSYQTMMRFGKRGLNLAANVAVTAAAKGQGVLSDRLRSFSMQDLTLLRDEDSIHLRSTDPQMKTSSSNILETISDSDTHRLLSGEDVGNTQAQKSDGEQPDVKLEQADEEIMDKVPKRTQSLKSNKQKLQRLEPQSKSVKLRVKKKASSHTESA
SIO_010081: reep2
subclass of: SO_0000673
so part of: reep2
location: join(784529..784551,787239..787311,790112..790188,792011..792131,793513..793626,797702..797849,805019..805188,807477..807542)
location: region:784529-807542:1
so has part: feature:784529-784551:1:exon
so has part: feature:787239-787311:1:exon
so has part: feature:790112-790188:1:exon
so has part: feature:792011-792131:1:exon
so has part: feature:793513-793626:1:exon
so has part: feature:797702-797849:1:exon
so has part: feature:805019-805188:1:exon
so has part: feature:807477-807542:1:exon

XP_032885063.1
type: Protein
SIO_000068: ncbiprotein

position:784529:1
position: 784529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:784529-784551:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:787239-787311:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:790112-790188:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:792011-792131:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:793513-793626:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:797702-797849:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:805019-805188:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:807477-807542:1:exon

LOC116978204
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116978204
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 825609..862051
location: region:825609-862051:1
so has part: feature:825609-862051:1:exon
subclass of: SO_0000010

116978204
type: Gene
SIO_000068: ncbigene

position:825609:1
position: 825609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:862051:1
position: 862051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:825609-862051:1:exon

LOC116978204
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116978204
product: matrin-3-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_033029174.1
SIO_010081: LOC116978204
subclass of: SO_0000673
so part of: LOC116978204
location: join(825609..825718,835887..836959,842905..842966,844211..844249,846594..846691,848264..848301,850251..850385,850665..850796,852170..852316,852561..852692,854833..854885,855689..856085,857667..857711,858543..858996,859326..859447,861067..862051)
location: region:825609-862051:1
so has part: feature:825609-825718:1:exon
so has part: feature:835887-836959:1:exon
so has part: feature:842905-842966:1:exon
so has part: feature:844211-844249:1:exon
so has part: feature:846594-846691:1:exon
so has part: feature:848264-848301:1:exon
so has part: feature:850251-850385:1:exon
so has part: feature:850665-850796:1:exon
so has part: feature:852170-852316:1:exon
so has part: feature:852561-852692:1:exon
so has part: feature:854833-854885:1:exon
so has part: feature:855689-856085:1:exon
so has part: feature:857667-857711:1:exon
so has part: feature:858543-858996:1:exon
so has part: feature:859326-859447:1:exon
so has part: feature:861067-862051:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:825609-825718:1:exon

position:825718:1
position: 825718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:835887-836959:1:exon

position:835887:1
position: 835887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:836959:1
position: 836959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:842905-842966:1:exon

position:842905:1
position: 842905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:842966:1
position: 842966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:844211-844249:1:exon

position:844211:1
position: 844211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:844249:1
position: 844249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:846594-846691:1:exon

position:846594:1
position: 846594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:846691:1
position: 846691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:848264-848301:1:exon

position:848264:1
position: 848264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:848301:1
position: 848301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:850251-850385:1:exon

position:850251:1
position: 850251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:850385:1
position: 850385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:850665-850796:1:exon

position:850665:1
position: 850665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:850796:1
position: 850796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:852170-852316:1:exon

position:852170:1
position: 852170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:852316:1
position: 852316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:852561-852692:1:exon

position:852561:1
position: 852561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:852692:1
position: 852692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:854833-854885:1:exon

position:854833:1
position: 854833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:854885:1
position: 854885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:855689-856085:1:exon

position:855689:1
position: 855689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:856085:1
position: 856085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:857667-857711:1:exon

position:857667:1
position: 857667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:857711:1
position: 857711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:858543-858996:1:exon

position:858543:1
position: 858543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:858996:1
position: 858996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:859326-859447:1:exon

position:859326:1
position: 859326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:859447:1
position: 859447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:861067-862051:1:exon

position:861067:1
position: 861067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116978204
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116978204
product: matrin-3-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_033029179.1
SIO_010081: LOC116978204
subclass of: SO_0000673
so part of: LOC116978204
location: join(825609..825718,835887..836959,842905..842966,844211..844249,846594..846691,848264..848301,850251..850385,850665..850796,852170..852316,852561..852692,854833..854885,855689..856085,858543..858996,859326..859447,861067..862051)
location: region:825609-862051:1
so has part: feature:825609-825718:1:exon
so has part: feature:835887-836959:1:exon
so has part: feature:842905-842966:1:exon
so has part: feature:844211-844249:1:exon
so has part: feature:846594-846691:1:exon
so has part: feature:848264-848301:1:exon
so has part: feature:850251-850385:1:exon
so has part: feature:850665-850796:1:exon
so has part: feature:852170-852316:1:exon
so has part: feature:852561-852692:1:exon
so has part: feature:854833-854885:1:exon
so has part: feature:855689-856085:1:exon
so has part: feature:858543-858996:1:exon
so has part: feature:859326-859447:1:exon
so has part: feature:861067-862051:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:825609-825718:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:835887-836959:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:842905-842966:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:844211-844249:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:846594-846691:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:848264-848301:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:850251-850385:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:850665-850796:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:852170-852316:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:852561-852692:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:854833-854885:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:855689-856085:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:858543-858996:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:859326-859447:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:861067-862051:1:exon

LOC116978204
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116978204
product: matrin-3-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_033029178.1
SIO_010081: LOC116978204
subclass of: SO_0000673
so part of: LOC116978204
location: join(825609..825718,835887..836959,842905..842966,844211..844249,846594..846691,848264..848301,850251..850385,850665..850796,852173..852316,852561..852692,854833..854885,855689..856085,857667..857711,858543..858996,859326..859447,861067..862051)
location: region:825609-862051:1
so has part: feature:825609-825718:1:exon
so has part: feature:835887-836959:1:exon
so has part: feature:842905-842966:1:exon
so has part: feature:844211-844249:1:exon
so has part: feature:846594-846691:1:exon
so has part: feature:848264-848301:1:exon
so has part: feature:850251-850385:1:exon
so has part: feature:850665-850796:1:exon
so has part: feature:852173-852316:1:exon
so has part: feature:852561-852692:1:exon
so has part: feature:854833-854885:1:exon
so has part: feature:855689-856085:1:exon
so has part: feature:857667-857711:1:exon
so has part: feature:858543-858996:1:exon
so has part: feature:859326-859447:1:exon
so has part: feature:861067-862051:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:825609-825718:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:835887-836959:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:842905-842966:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:844211-844249:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:846594-846691:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:848264-848301:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:850251-850385:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:850665-850796:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:852173-852316:1:exon

position:852173:1
position: 852173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:852561-852692:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:854833-854885:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:855689-856085:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:857667-857711:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:858543-858996:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:859326-859447:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:861067-862051:1:exon

LOC116978204
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116978204
product: matrin-3-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_033029176.1
SIO_010081: LOC116978204
subclass of: SO_0000673
so part of: LOC116978204
location: join(825609..825668,835887..836959,842905..842966,844211..844249,846594..846691,848264..848301,850251..850385,850665..850796,852170..852316,852561..852692,854833..854885,855689..856085,857667..857711,858543..858996,859326..859447,861067..862051)
location: region:825609-862051:1
so has part: feature:825609-825668:1:exon
so has part: feature:835887-836959:1:exon
so has part: feature:842905-842966:1:exon
so has part: feature:844211-844249:1:exon
so has part: feature:846594-846691:1:exon
so has part: feature:848264-848301:1:exon
so has part: feature:850251-850385:1:exon
so has part: feature:850665-850796:1:exon
so has part: feature:852170-852316:1:exon
so has part: feature:852561-852692:1:exon
so has part: feature:854833-854885:1:exon
so has part: feature:855689-856085:1:exon
so has part: feature:857667-857711:1:exon
so has part: feature:858543-858996:1:exon
so has part: feature:859326-859447:1:exon
so has part: feature:861067-862051:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:825609-825668:1:exon

position:825668:1
position: 825668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:835887-836959:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:842905-842966:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:844211-844249:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:846594-846691:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:848264-848301:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:850251-850385:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:850665-850796:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:852170-852316:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:852561-852692:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:854833-854885:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:855689-856085:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:857667-857711:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:858543-858996:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:859326-859447:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:861067-862051:1:exon

LOC116978204
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116978204
product: matrin-3-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_033029175.1
SIO_010081: LOC116978204
subclass of: SO_0000673
so part of: LOC116978204
location: join(825675..825794,835887..836959,842905..842966,844211..844249,846594..846691,848264..848301,850251..850385,850665..850796,852170..852316,852561..852692,854833..854885,855689..856085,857667..857711,858543..858996,859326..859447,861067..862051)
location: region:825675-862051:1
so has part: feature:825675-825794:1:exon
so has part: feature:835887-836959:1:exon
so has part: feature:842905-842966:1:exon
so has part: feature:844211-844249:1:exon
so has part: feature:846594-846691:1:exon
so has part: feature:848264-848301:1:exon
so has part: feature:850251-850385:1:exon
so has part: feature:850665-850796:1:exon
so has part: feature:852170-852316:1:exon
so has part: feature:852561-852692:1:exon
so has part: feature:854833-854885:1:exon
so has part: feature:855689-856085:1:exon
so has part: feature:857667-857711:1:exon
so has part: feature:858543-858996:1:exon
so has part: feature:859326-859447:1:exon
so has part: feature:861067-862051:1:exon

position:825675:1
position: 825675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:825675-825794:1:exon

position:825794:1
position: 825794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:835887-836959:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:842905-842966:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:844211-844249:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:846594-846691:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:848264-848301:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:850251-850385:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:850665-850796:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:852170-852316:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:852561-852692:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:854833-854885:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:855689-856085:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:857667-857711:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:858543-858996:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:859326-859447:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:861067-862051:1:exon

LOC116978204
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116978204
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: matrin-3-like isoform X1
translation: MSLDGAQQDHGRGMKKDTHNIGFFPADQSANPHAHLGRMSQGARMGGYMNFGRGQAVGLQGLGQGQQNIMFSGGGPSRSSGSLPSLFDVGSRNQTSLAAQKRIDADRASNILATFGLSSRDLDELSRYPEEKLTPDSLPDILMQLKRKRNDDGASLNYGRGDSSPREDRSFRASRSDWEEERCFRNTFEGREPDADSVVNYDHGSSRESSFRYYDRKDYEPERLRGDDFRRDDMRLSDPMYKYDSDYGKMGPSPSRGQERSLFERKRGSPSLSNINDYHGFLPAMFPHLCSLCDVTVHSVKEWNQHKHEPAHKRRCLLLLEIYPQWVPDNVPPSRNNPAARQSTLAPDAASAILAAIRQLDALDPHGGIRKGQMQNKRIVAMDDSGRVVHMTELPKGKCKVKDILKLAQPFGIITKYLFLNTKHEGFVEMATSGQAQTAVAFYSTRPAILYGKKIRVDMSHKYKEIDLKKQKQDHRSGGRVALLQNLPPSGYSDADVVKVGANFGKVLNYIVMRLRNQAFLEMESKKCMIDMVKHYKKTPLIFRGRKVTVDPSQKYKTLVLKKPSIKVLEVLREQDEADRRRRRSRSPLKKKQPSKSRIHPKDDGDKGEQGTSESLPSSEIKKNIAGDTKQEIKSEGKEVSDEEAIAVVESDVELEENIGEELCTSESGSETDQEGLPKEPGDEMEASDLVEANSKMDMEMNMQDASETTEPASVIEKSEINQQISQELKEACFPENIDEFVTVDEVGDVDAGNLDLEDLTSCADNISKLENDADASIVTEKSEDTNEQKEEDVDKPKRKRGRKRGKIVKTKRAEHSDKKDSGEETELKQDENMTENKMDTDEMQGETCVEPENKRARSRSPTPDEYRLGPYQPNNPVGLDYVVPKTGYYCTLCCLFYTKEDVAKKTHCSSLPHYQKLKKILDKEAEDYRKTKTEQNPEVQVEEQTDQ
SIO_010081: LOC116978204
subclass of: SO_0000673
so part of: LOC116978204
location: join(836057..836959,842905..842966,844211..844249,846594..846691,848264..848301,850251..850385,850665..850796,852170..852316,852561..852692,854833..854885,855689..856085,857667..857711,858543..858996,859326..859447,861067..861156)
location: region:836057-861156:1
so has part: feature:836057-836959:1:exon
so has part: feature:842905-842966:1:exon
so has part: feature:844211-844249:1:exon
so has part: feature:846594-846691:1:exon
so has part: feature:848264-848301:1:exon
so has part: feature:850251-850385:1:exon
so has part: feature:850665-850796:1:exon
so has part: feature:852170-852316:1:exon
so has part: feature:852561-852692:1:exon
so has part: feature:854833-854885:1:exon
so has part: feature:855689-856085:1:exon
so has part: feature:857667-857711:1:exon
so has part: feature:858543-858996:1:exon
so has part: feature:859326-859447:1:exon
so has part: feature:861067-861156:1:exon

XP_032885065.1
type: Protein
SIO_000068: ncbiprotein

position:836057:1
position: 836057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:861156:1
position: 861156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:836057-836959:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:842905-842966:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:844211-844249:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:846594-846691:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:848264-848301:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:850251-850385:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:850665-850796:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:852170-852316:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:852561-852692:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:854833-854885:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:855689-856085:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:857667-857711:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:858543-858996:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:859326-859447:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:861067-861156:1:exon

LOC116978204
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116978204
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: matrin-3-like isoform X1
translation: MSLDGAQQDHGRGMKKDTHNIGFFPADQSANPHAHLGRMSQGARMGGYMNFGRGQAVGLQGLGQGQQNIMFSGGGPSRSSGSLPSLFDVGSRNQTSLAAQKRIDADRASNILATFGLSSRDLDELSRYPEEKLTPDSLPDILMQLKRKRNDDGASLNYGRGDSSPREDRSFRASRSDWEEERCFRNTFEGREPDADSVVNYDHGSSRESSFRYYDRKDYEPERLRGDDFRRDDMRLSDPMYKYDSDYGKMGPSPSRGQERSLFERKRGSPSLSNINDYHGFLPAMFPHLCSLCDVTVHSVKEWNQHKHEPAHKRRCLLLLEIYPQWVPDNVPPSRNNPAARQSTLAPDAASAILAAIRQLDALDPHGGIRKGQMQNKRIVAMDDSGRVVHMTELPKGKCKVKDILKLAQPFGIITKYLFLNTKHEGFVEMATSGQAQTAVAFYSTRPAILYGKKIRVDMSHKYKEIDLKKQKQDHRSGGRVALLQNLPPSGYSDADVVKVGANFGKVLNYIVMRLRNQAFLEMESKKCMIDMVKHYKKTPLIFRGRKVTVDPSQKYKTLVLKKPSIKVLEVLREQDEADRRRRRSRSPLKKKQPSKSRIHPKDDGDKGEQGTSESLPSSEIKKNIAGDTKQEIKSEGKEVSDEEAIAVVESDVELEENIGEELCTSESGSETDQEGLPKEPGDEMEASDLVEANSKMDMEMNMQDASETTEPASVIEKSEINQQISQELKEACFPENIDEFVTVDEVGDVDAGNLDLEDLTSCADNISKLENDADASIVTEKSEDTNEQKEEDVDKPKRKRGRKRGKIVKTKRAEHSDKKDSGEETELKQDENMTENKMDTDEMQGETCVEPENKRARSRSPTPDEYRLGPYQPNNPVGLDYVVPKTGYYCTLCCLFYTKEDVAKKTHCSSLPHYQKLKKILDKEAEDYRKTKTEQNPEVQVEEQTDQ
SIO_010081: LOC116978204
subclass of: SO_0000673
so part of: LOC116978204
location: join(836057..836959,842905..842966,844211..844249,846594..846691,848264..848301,850251..850385,850665..850796,852170..852316,852561..852692,854833..854885,855689..856085,857667..857711,858543..858996,859326..859447,861067..861156)
location: region:836057-861156:1
so has part: feature:836057-836959:1:exon
so has part: feature:842905-842966:1:exon
so has part: feature:844211-844249:1:exon
so has part: feature:846594-846691:1:exon
so has part: feature:848264-848301:1:exon
so has part: feature:850251-850385:1:exon
so has part: feature:850665-850796:1:exon
so has part: feature:852170-852316:1:exon
so has part: feature:852561-852692:1:exon
so has part: feature:854833-854885:1:exon
so has part: feature:855689-856085:1:exon
so has part: feature:857667-857711:1:exon
so has part: feature:858543-858996:1:exon
so has part: feature:859326-859447:1:exon
so has part: feature:861067-861156:1:exon

XP_032885066.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:836057-836959:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:842905-842966:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:844211-844249:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:846594-846691:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:848264-848301:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:850251-850385:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:850665-850796:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:852170-852316:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:852561-852692:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:854833-854885:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:855689-856085:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:857667-857711:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:858543-858996:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:859326-859447:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:861067-861156:1:exon

LOC116978204
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116978204
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: matrin-3-like isoform X1
translation: MSLDGAQQDHGRGMKKDTHNIGFFPADQSANPHAHLGRMSQGARMGGYMNFGRGQAVGLQGLGQGQQNIMFSGGGPSRSSGSLPSLFDVGSRNQTSLAAQKRIDADRASNILATFGLSSRDLDELSRYPEEKLTPDSLPDILMQLKRKRNDDGASLNYGRGDSSPREDRSFRASRSDWEEERCFRNTFEGREPDADSVVNYDHGSSRESSFRYYDRKDYEPERLRGDDFRRDDMRLSDPMYKYDSDYGKMGPSPSRGQERSLFERKRGSPSLSNINDYHGFLPAMFPHLCSLCDVTVHSVKEWNQHKHEPAHKRRCLLLLEIYPQWVPDNVPPSRNNPAARQSTLAPDAASAILAAIRQLDALDPHGGIRKGQMQNKRIVAMDDSGRVVHMTELPKGKCKVKDILKLAQPFGIITKYLFLNTKHEGFVEMATSGQAQTAVAFYSTRPAILYGKKIRVDMSHKYKEIDLKKQKQDHRSGGRVALLQNLPPSGYSDADVVKVGANFGKVLNYIVMRLRNQAFLEMESKKCMIDMVKHYKKTPLIFRGRKVTVDPSQKYKTLVLKKPSIKVLEVLREQDEADRRRRRSRSPLKKKQPSKSRIHPKDDGDKGEQGTSESLPSSEIKKNIAGDTKQEIKSEGKEVSDEEAIAVVESDVELEENIGEELCTSESGSETDQEGLPKEPGDEMEASDLVEANSKMDMEMNMQDASETTEPASVIEKSEINQQISQELKEACFPENIDEFVTVDEVGDVDAGNLDLEDLTSCADNISKLENDADASIVTEKSEDTNEQKEEDVDKPKRKRGRKRGKIVKTKRAEHSDKKDSGEETELKQDENMTENKMDTDEMQGETCVEPENKRARSRSPTPDEYRLGPYQPNNPVGLDYVVPKTGYYCTLCCLFYTKEDVAKKTHCSSLPHYQKLKKILDKEAEDYRKTKTEQNPEVQVEEQTDQ
SIO_010081: LOC116978204
subclass of: SO_0000673
so part of: LOC116978204
location: join(836057..836959,842905..842966,844211..844249,846594..846691,848264..848301,850251..850385,850665..850796,852170..852316,852561..852692,854833..854885,855689..856085,857667..857711,858543..858996,859326..859447,861067..861156)
location: region:836057-861156:1
so has part: feature:836057-836959:1:exon
so has part: feature:842905-842966:1:exon
so has part: feature:844211-844249:1:exon
so has part: feature:846594-846691:1:exon
so has part: feature:848264-848301:1:exon
so has part: feature:850251-850385:1:exon
so has part: feature:850665-850796:1:exon
so has part: feature:852170-852316:1:exon
so has part: feature:852561-852692:1:exon
so has part: feature:854833-854885:1:exon
so has part: feature:855689-856085:1:exon
so has part: feature:857667-857711:1:exon
so has part: feature:858543-858996:1:exon
so has part: feature:859326-859447:1:exon
so has part: feature:861067-861156:1:exon

XP_032885067.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:836057-836959:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:842905-842966:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:844211-844249:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:846594-846691:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:848264-848301:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:850251-850385:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:850665-850796:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:852170-852316:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:852561-852692:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:854833-854885:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:855689-856085:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:857667-857711:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:858543-858996:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:859326-859447:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:861067-861156:1:exon

LOC116978204
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116978204
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: matrin-3-like isoform X3
translation: MSLDGAQQDHGRGMKKDTHNIGFFPADQSANPHAHLGRMSQGARMGGYMNFGRGQAVGLQGLGQGQQNIMFSGGGPSRSSGSLPSLFDVGSRNQTSLAAQKRIDADRASNILATFGLSSRDLDELSRYPEEKLTPDSLPDILMQLKRKRNDDGASLNYGRGDSSPREDRSFRASRSDWEEERCFRNTFEGREPDADSVVNYDHGSSRESSFRYYDRKDYEPERLRGDDFRRDDMRLSDPMYKYDSDYGKMGPSPSRGQERSLFERKRGSPSLSNINDYHGFLPAMFPHLCSLCDVTVHSVKEWNQHKHEPAHKRRCLLLLEIYPQWVPDNVPPSRNNPAARQSTLAPDAASAILAAIRQLDALDPHGGIRKGQMQNKRIVAMDDSGRVVHMTELPKGKCKVKDILKLAQPFGIITKYLFLNTKHEGFVEMATSGQAQTAVAFYSTRPAILYGKKIRVDMSHKYKEIDLKKQKQDHRSGGRVALLQNLPPSGYSDADVVKVGANFGKVLNYIVMRLRNQAFLEMESKKCMIDMVKHYKKTPLIFRGRKVTVDPSQKYKTLVLKKPSIKVLEVLREQDEADRRRRRSRSPLKKKQPSKSRIHPKDDGDKGEQGTSESLPSSEIKKNIAGDTKQEIKSEGKEVSDEEAIAVVESDVELEENIGEELCTSESGSETDQEGLPKEPGDEMEASDLVEANSKMDMEMNMQDASETTEPELKEACFPENIDEFVTVDEVGDVDAGNLDLEDLTSCADNISKLENDADASIVTEKSEDTNEQKEEDVDKPKRKRGRKRGKIVKTKRAEHSDKKDSGEETELKQDENMTENKMDTDEMQGETCVEPENKRARSRSPTPDEYRLGPYQPNNPVGLDYVVPKTGYYCTLCCLFYTKEDVAKKTHCSSLPHYQKLKKILDKEAEDYRKTKTEQNPEVQVEEQTDQ
SIO_010081: LOC116978204
subclass of: SO_0000673
so part of: LOC116978204
location: join(836057..836959,842905..842966,844211..844249,846594..846691,848264..848301,850251..850385,850665..850796,852170..852316,852561..852692,854833..854885,855689..856085,858543..858996,859326..859447,861067..861156)
location: region:836057-861156:1
so has part: feature:836057-836959:1:exon
so has part: feature:842905-842966:1:exon
so has part: feature:844211-844249:1:exon
so has part: feature:846594-846691:1:exon
so has part: feature:848264-848301:1:exon
so has part: feature:850251-850385:1:exon
so has part: feature:850665-850796:1:exon
so has part: feature:852170-852316:1:exon
so has part: feature:852561-852692:1:exon
so has part: feature:854833-854885:1:exon
so has part: feature:855689-856085:1:exon
so has part: feature:858543-858996:1:exon
so has part: feature:859326-859447:1:exon
so has part: feature:861067-861156:1:exon

XP_032885070.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:836057-836959:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:842905-842966:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:844211-844249:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:846594-846691:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:848264-848301:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:850251-850385:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:850665-850796:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:852170-852316:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:852561-852692:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:854833-854885:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:855689-856085:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:858543-858996:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:859326-859447:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:861067-861156:1:exon

LOC116978204
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116978204
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: matrin-3-like isoform X2
translation: MSLDGAQQDHGRGMKKDTHNIGFFPADQSANPHAHLGRMSQGARMGGYMNFGRGQAVGLQGLGQGQQNIMFSGGGPSRSSGSLPSLFDVGSRNQTSLAAQKRIDADRASNILATFGLSSRDLDELSRYPEEKLTPDSLPDILMQLKRKRNDDGASLNYGRGDSSPREDRSFRASRSDWEEERCFRNTFEGREPDADSVVNYDHGSSRESSFRYYDRKDYEPERLRGDDFRRDDMRLSDPMYKYDSDYGKMGPSPSRGQERSLFERKRGSPSLSNINDYHGFLPAMFPHLCSLCDVTVHSVKEWNQHKHEPAHKRRCLLLLEIYPQWVPDNVPPSRNNPAARQSTLAPDAASAILAAIRQLDALDPHGGIRKGQMQNKRIVAMDDSGRVVHMTELPKGKCKVKDILKLAQPFGIITKYLFLNTKHEGFVEMATSGQAQTAVAFYSTRPAILYGKKIRVDMSHKYKEIDLKQKQDHRSGGRVALLQNLPPSGYSDADVVKVGANFGKVLNYIVMRLRNQAFLEMESKKCMIDMVKHYKKTPLIFRGRKVTVDPSQKYKTLVLKKPSIKVLEVLREQDEADRRRRRSRSPLKKKQPSKSRIHPKDDGDKGEQGTSESLPSSEIKKNIAGDTKQEIKSEGKEVSDEEAIAVVESDVELEENIGEELCTSESGSETDQEGLPKEPGDEMEASDLVEANSKMDMEMNMQDASETTEPASVIEKSEINQQISQELKEACFPENIDEFVTVDEVGDVDAGNLDLEDLTSCADNISKLENDADASIVTEKSEDTNEQKEEDVDKPKRKRGRKRGKIVKTKRAEHSDKKDSGEETELKQDENMTENKMDTDEMQGETCVEPENKRARSRSPTPDEYRLGPYQPNNPVGLDYVVPKTGYYCTLCCLFYTKEDVAKKTHCSSLPHYQKLKKILDKEAEDYRKTKTEQNPEVQVEEQTDQ
SIO_010081: LOC116978204
subclass of: SO_0000673
so part of: LOC116978204
location: join(836057..836959,842905..842966,844211..844249,846594..846691,848264..848301,850251..850385,850665..850796,852173..852316,852561..852692,854833..854885,855689..856085,857667..857711,858543..858996,859326..859447,861067..861156)
location: region:836057-861156:1
so has part: feature:836057-836959:1:exon
so has part: feature:842905-842966:1:exon
so has part: feature:844211-844249:1:exon
so has part: feature:846594-846691:1:exon
so has part: feature:848264-848301:1:exon
so has part: feature:850251-850385:1:exon
so has part: feature:850665-850796:1:exon
so has part: feature:852173-852316:1:exon
so has part: feature:852561-852692:1:exon
so has part: feature:854833-854885:1:exon
so has part: feature:855689-856085:1:exon
so has part: feature:857667-857711:1:exon
so has part: feature:858543-858996:1:exon
so has part: feature:859326-859447:1:exon
so has part: feature:861067-861156:1:exon

XP_032885069.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:836057-836959:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:842905-842966:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:844211-844249:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:846594-846691:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:848264-848301:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:850251-850385:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:850665-850796:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:852173-852316:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:852561-852692:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:854833-854885:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:855689-856085:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:857667-857711:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:858543-858996:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:859326-859447:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:861067-861156:1:exon

LOC116978205
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116978205
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 898663..910680
location: region:898663-910680:1
so has part: feature:898663-910680:1:exon
subclass of: SO_0000010

116978205
type: Gene
SIO_000068: ncbigene

position:898663:1
position: 898663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:910680:1
position: 910680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:898663-910680:1:exon

LOC116978205
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116978205
product: uncharacterized LOC116978205, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033029183.1
SIO_010081: LOC116978205
subclass of: SO_0000673
so part of: LOC116978205
location: join(898663..899066,899859..900001,901279..901410,906840..907749,910608..910680)
location: region:898663-910680:1
so has part: feature:898663-899066:1:exon
so has part: feature:899859-900001:1:exon
so has part: feature:901279-901410:1:exon
so has part: feature:906840-907749:1:exon
so has part: feature:910608-910680:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:898663-899066:1:exon

position:899066:1
position: 899066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:899859-900001:1:exon

position:899859:1
position: 899859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:900001:1
position: 900001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:901279-901410:1:exon

position:901279:1
position: 901279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:901410:1
position: 901410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:906840-907749:1:exon

position:906840:1
position: 906840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:907749:1
position: 907749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:910608-910680:1:exon

position:910608:1
position: 910608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116978205
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116978205
product: uncharacterized LOC116978205, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_033029181.1
SIO_010081: LOC116978205
subclass of: SO_0000673
so part of: LOC116978205
location: join(898663..899024,899058..899134,899861..900001,901279..901410,906840..907749,910608..910680)
location: region:898663-910680:1
so has part: feature:898663-899024:1:exon
so has part: feature:899058-899134:1:exon
so has part: feature:899861-900001:1:exon
so has part: feature:901279-901410:1:exon
so has part: feature:906840-907749:1:exon
so has part: feature:910608-910680:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:898663-899024:1:exon

position:899024:1
position: 899024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:899058-899134:1:exon

position:899058:1
position: 899058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:899134:1
position: 899134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:899861-900001:1:exon

position:899861:1
position: 899861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:901279-901410:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:906840-907749:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:910608-910680:1:exon

LOC116978205
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116978205
product: uncharacterized LOC116978205, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_033029182.1
SIO_010081: LOC116978205
subclass of: SO_0000673
so part of: LOC116978205
location: join(898663..899024,899091..899134,899861..900001,901279..901410,906840..907749,910608..910680)
location: region:898663-910680:1
so has part: feature:898663-899024:1:exon
so has part: feature:899091-899134:1:exon
so has part: feature:899861-900001:1:exon
so has part: feature:901279-901410:1:exon
so has part: feature:906840-907749:1:exon
so has part: feature:910608-910680:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:898663-899024:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:899091-899134:1:exon

position:899091:1
position: 899091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:899861-900001:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:901279-901410:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:906840-907749:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:910608-910680:1:exon

LOC116978205
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116978205
product: uncharacterized LOC116978205, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_033029180.1
SIO_010081: LOC116978205
subclass of: SO_0000673
so part of: LOC116978205
location: join(898664..899134,899861..900001,901279..901410,906840..907749,910608..910680)
location: region:898664-910680:1
so has part: feature:898664-899134:1:exon
so has part: feature:899861-900001:1:exon
so has part: feature:901279-901410:1:exon
so has part: feature:906840-907749:1:exon
so has part: feature:910608-910680:1:exon

position:898664:1
position: 898664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:898664-899134:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:899861-900001:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:901279-901410:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:906840-907749:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:910608-910680:1:exon

LOC116978205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116978205
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116978205 isoform X1
translation: MEKPEVNNVVEIKSEKLREETPIPFLESDSELEGLMEKYESDDDQDDPEKMQCGDGQGTEVSSGSEVDLQQGSVCSEVDLQQGSVSSEVDLQQGSVCSEVDLQQGSVESNSEEEPGHVVFVGDLVPGKCTHAYLIHLAELFGKINKVVLIKGKGEGFVEMRNSADAQAMVRFFKAKPPVIQGNILRVELSQKYKTLCLKLPYSHRTGGIMPLIGQFGASENVSDPKDILISTSTPTLAELRAKHSAQLLKWANVPLEGNMPTKDKRWSPQTYEGKELECFRFLPYAFKVPMLETHRQYLQSITGSPDMYEIDTPKIDDAFIQLLVGKKVISSHDDLDKQLGEPERILCKAQSKVAEIVHPVVLAIQKYEFDELSGELDTLTKEQLIERLQSTIISCHQSILNAGQTHRWLTELQTENLLKLFKFGHMSVKPQDYPNVTSPDLLGAELAEQILKKGEVVRRKTALPPMKKKTPINVFKKKKVSPKQWRGSHPYYWSLKPFRGRGGPFKGHVRGHPMF
SIO_010081: LOC116978205
subclass of: SO_0000673
so part of: LOC116978205
location: join(898811..899134,899861..900001,901279..901410,906840..907749,910608..910651)
location: region:898811-910651:1
so has part: feature:898811-899134:1:exon
so has part: feature:899861-900001:1:exon
so has part: feature:901279-901410:1:exon
so has part: feature:906840-907749:1:exon
so has part: feature:910608-910651:1:exon

XP_032885071.1
type: Protein
SIO_000068: ncbiprotein

position:898811:1
position: 898811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:910651:1
position: 910651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:898811-899134:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:899861-900001:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:901279-901410:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:906840-907749:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:910608-910651:1:exon

LOC116978205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116978205
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116978205 isoform X4
translation: MEKPEVNNVVEIKSEKLREETPIPFLESDSELEGLMEKYESDDDQDDPEKMQCGDGQGTEVSSGSEVDLQQGSVCSEVDLQQGSVKSNSEEEPGHVVFVGDLVPGKCTHAYLIHLAELFGKINKVVLIKGKGEGFVEMRNSADAQAMVRFFKAKPPVIQGNILRVELSQKYKTLCLKLPYSHRTGGIMPLIGQFGASENVSDPKDILISTSTPTLAELRAKHSAQLLKWANVPLEGNMPTKDKRWSPQTYEGKELECFRFLPYAFKVPMLETHRQYLQSITGSPDMYEIDTPKIDDAFIQLLVGKKVISSHDDLDKQLGEPERILCKAQSKVAEIVHPVVLAIQKYEFDELSGELDTLTKEQLIERLQSTIISCHQSILNAGQTHRWLTELQTENLLKLFKFGHMSVKPQDYPNVTSPDLLGAELAEQILKKGEVVRRKTALPPMKKKTPINVFKKKKVSPKQWRGSHPYYWSLKPFRGRGGPFKGHVRGHPMF
SIO_010081: LOC116978205
subclass of: SO_0000673
so part of: LOC116978205
location: join(898811..899066,899859..900001,901279..901410,906840..907749,910608..910651)
location: region:898811-910651:1
so has part: feature:898811-899066:1:exon
so has part: feature:899859-900001:1:exon
so has part: feature:901279-901410:1:exon
so has part: feature:906840-907749:1:exon
so has part: feature:910608-910651:1:exon

XP_032885074.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:898811-899066:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:899859-900001:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:901279-901410:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:906840-907749:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:910608-910651:1:exon

LOC116978205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116978205
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116978205 isoform X2
translation: MEKPEVNNVVEIKSEKLREETPIPFLESDSELEGLMEKYESDDDQDDPEKMQCGDGQGTEVSSGSEVDLQQGSVSSEVDLQQGSVCSEVDLQQGSVESNSEEEPGHVVFVGDLVPGKCTHAYLIHLAELFGKINKVVLIKGKGEGFVEMRNSADAQAMVRFFKAKPPVIQGNILRVELSQKYKTLCLKLPYSHRTGGIMPLIGQFGASENVSDPKDILISTSTPTLAELRAKHSAQLLKWANVPLEGNMPTKDKRWSPQTYEGKELECFRFLPYAFKVPMLETHRQYLQSITGSPDMYEIDTPKIDDAFIQLLVGKKVISSHDDLDKQLGEPERILCKAQSKVAEIVHPVVLAIQKYEFDELSGELDTLTKEQLIERLQSTIISCHQSILNAGQTHRWLTELQTENLLKLFKFGHMSVKPQDYPNVTSPDLLGAELAEQILKKGEVVRRKTALPPMKKKTPINVFKKKKVSPKQWRGSHPYYWSLKPFRGRGGPFKGHVRGHPMF
SIO_010081: LOC116978205
subclass of: SO_0000673
so part of: LOC116978205
location: join(898811..899024,899058..899134,899861..900001,901279..901410,906840..907749,910608..910651)
location: region:898811-910651:1
so has part: feature:898811-899024:1:exon
so has part: feature:899058-899134:1:exon
so has part: feature:899861-900001:1:exon
so has part: feature:901279-901410:1:exon
so has part: feature:906840-907749:1:exon
so has part: feature:910608-910651:1:exon

XP_032885072.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:898811-899024:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:899058-899134:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:899861-900001:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:901279-901410:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:906840-907749:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:910608-910651:1:exon

LOC116978205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116978205
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116978205 isoform X3
translation: MEKPEVNNVVEIKSEKLREETPIPFLESDSELEGLMEKYESDDDQDDPEKMQCGDGQGTEVSSGSEVDLQQGSVCSEVDLQQGSVESNSEEEPGHVVFVGDLVPGKCTHAYLIHLAELFGKINKVVLIKGKGEGFVEMRNSADAQAMVRFFKAKPPVIQGNILRVELSQKYKTLCLKLPYSHRTGGIMPLIGQFGASENVSDPKDILISTSTPTLAELRAKHSAQLLKWANVPLEGNMPTKDKRWSPQTYEGKELECFRFLPYAFKVPMLETHRQYLQSITGSPDMYEIDTPKIDDAFIQLLVGKKVISSHDDLDKQLGEPERILCKAQSKVAEIVHPVVLAIQKYEFDELSGELDTLTKEQLIERLQSTIISCHQSILNAGQTHRWLTELQTENLLKLFKFGHMSVKPQDYPNVTSPDLLGAELAEQILKKGEVVRRKTALPPMKKKTPINVFKKKKVSPKQWRGSHPYYWSLKPFRGRGGPFKGHVRGHPMF
SIO_010081: LOC116978205
subclass of: SO_0000673
so part of: LOC116978205
location: join(898811..899024,899091..899134,899861..900001,901279..901410,906840..907749,910608..910651)
location: region:898811-910651:1
so has part: feature:898811-899024:1:exon
so has part: feature:899091-899134:1:exon
so has part: feature:899861-900001:1:exon
so has part: feature:901279-901410:1:exon
so has part: feature:906840-907749:1:exon
so has part: feature:910608-910651:1:exon

XP_032885073.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:898811-899024:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:899091-899134:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:899861-900001:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:901279-901410:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:906840-907749:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:910608-910651:1:exon

LOC116978207
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116978207
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 920891..976385
location: region:920891-976385:1
so has part: feature:920891-976385:1:exon
subclass of: SO_0000010

116978207
type: Gene
SIO_000068: ncbigene

position:920891:1
position: 920891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:976385:1
position: 976385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:920891-976385:1:exon

LOC116978207
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116978207
product: matrin-3-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_033029184.1
SIO_010081: LOC116978207
subclass of: SO_0000673
so part of: LOC116978207
location: join(920891..920994,928513..929675,940037..940098,940974..941012,943250..943365,949175..949248,950752..950889,952180..952311,953917..954057,957274..957405,957864..957916,962579..962990,966804..967137,970298..970419,973330..976385)
location: region:920891-976385:1
so has part: feature:920891-920994:1:exon
so has part: feature:928513-929675:1:exon
so has part: feature:940037-940098:1:exon
so has part: feature:940974-941012:1:exon
so has part: feature:943250-943365:1:exon
so has part: feature:949175-949248:1:exon
so has part: feature:950752-950889:1:exon
so has part: feature:952180-952311:1:exon
so has part: feature:953917-954057:1:exon
so has part: feature:957274-957405:1:exon
so has part: feature:957864-957916:1:exon
so has part: feature:962579-962990:1:exon
so has part: feature:966804-967137:1:exon
so has part: feature:970298-970419:1:exon
so has part: feature:973330-976385:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:920891-920994:1:exon

position:920994:1
position: 920994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:928513-929675:1:exon

position:928513:1
position: 928513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:929675:1
position: 929675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:940037-940098:1:exon

position:940037:1
position: 940037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:940098:1
position: 940098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:940974-941012:1:exon

position:940974:1
position: 940974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:941012:1
position: 941012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:943250-943365:1:exon

position:943250:1
position: 943250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:943365:1
position: 943365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:949175-949248:1:exon

position:949175:1
position: 949175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:949248:1
position: 949248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:950752-950889:1:exon

position:950752:1
position: 950752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:950889:1
position: 950889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:952180-952311:1:exon

position:952180:1
position: 952180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:952311:1
position: 952311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:953917-954057:1:exon

position:953917:1
position: 953917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:954057:1
position: 954057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:957274-957405:1:exon

position:957274:1
position: 957274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:957405:1
position: 957405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:957864-957916:1:exon

position:957864:1
position: 957864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:957916:1
position: 957916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:962579-962990:1:exon

position:962579:1
position: 962579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:962990:1
position: 962990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:966804-967137:1:exon

position:966804:1
position: 966804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:967137:1
position: 967137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:970298-970419:1:exon

position:970298:1
position: 970298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:970419:1
position: 970419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:973330-976385:1:exon

position:973330:1
position: 973330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116978207
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116978207
product: matrin-3-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_033029186.1
SIO_010081: LOC116978207
subclass of: SO_0000673
so part of: LOC116978207
location: join(920891..920994,928513..929675,940037..940098,940974..941012,943250..943365,949175..949248,950752..950889,952180..952311,953917..954057,957274..957405,957864..957916,962579..962990,966891..967137,970298..970419,973330..976385)
location: region:920891-976385:1
so has part: feature:920891-920994:1:exon
so has part: feature:928513-929675:1:exon
so has part: feature:940037-940098:1:exon
so has part: feature:940974-941012:1:exon
so has part: feature:943250-943365:1:exon
so has part: feature:949175-949248:1:exon
so has part: feature:950752-950889:1:exon
so has part: feature:952180-952311:1:exon
so has part: feature:953917-954057:1:exon
so has part: feature:957274-957405:1:exon
so has part: feature:957864-957916:1:exon
so has part: feature:962579-962990:1:exon
so has part: feature:966891-967137:1:exon
so has part: feature:970298-970419:1:exon
so has part: feature:973330-976385:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:920891-920994:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:928513-929675:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:940037-940098:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:940974-941012:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:943250-943365:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:949175-949248:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:950752-950889:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:952180-952311:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:953917-954057:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:957274-957405:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:957864-957916:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:962579-962990:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:966891-967137:1:exon

position:966891:1
position: 966891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:970298-970419:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:973330-976385:1:exon

LOC116978207
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116978207
product: matrin-3-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_033029185.1
SIO_010081: LOC116978207
subclass of: SO_0000673
so part of: LOC116978207
location: join(921548..921663,928513..929675,940037..940098,940974..941012,943250..943365,949175..949248,950752..950889,952180..952311,953917..954057,957274..957405,957864..957916,962579..962990,966804..967137,970298..970419,973330..976385)
location: region:921548-976385:1
so has part: feature:921548-921663:1:exon
so has part: feature:928513-929675:1:exon
so has part: feature:940037-940098:1:exon
so has part: feature:940974-941012:1:exon
so has part: feature:943250-943365:1:exon
so has part: feature:949175-949248:1:exon
so has part: feature:950752-950889:1:exon
so has part: feature:952180-952311:1:exon
so has part: feature:953917-954057:1:exon
so has part: feature:957274-957405:1:exon
so has part: feature:957864-957916:1:exon
so has part: feature:962579-962990:1:exon
so has part: feature:966804-967137:1:exon
so has part: feature:970298-970419:1:exon
so has part: feature:973330-976385:1:exon

position:921548:1
position: 921548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:921548-921663:1:exon

position:921663:1
position: 921663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:928513-929675:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:940037-940098:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:940974-941012:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:943250-943365:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:949175-949248:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:950752-950889:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:952180-952311:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:953917-954057:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:957274-957405:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:957864-957916:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:962579-962990:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:966804-967137:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:970298-970419:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:973330-976385:1:exon

LOC116978207
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116978207
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: matrin-3-like isoform X1
translation: MASYGRGNQMRAKRKSRFHDAEGGGHAAGPSLNIQAALGTLCQNPHLAGLINSGQGQNYGPQGVGPGQNFGPQSAGQGQNFGLQGVGQRVKGLISSAGGPSRYSDTASNSLPSLFGVRNQNQQSHAHQKQIDADRASNILAAFGLSSRDLDELSHYPEDKLTPESLPEILMEIKRRRANEGASSKYNRGDGSLRHDRSYRASHDDWEEERHFRKHNYASRDSSLDSVVEYGHGHSSRESSSRYDRKDYERERLRGNDDFSREEMHLSESSHNFNKFDSDYGRSARLPSPRTHERSLFERKRGSPSLNNINDYHGFLPAVFPYLCSLCDLTIHSVQDWNQHNNSSTHRRLCDLLVEIYPEWNPDVFPSQMGDPLVLQSTNLAPGILGPPPSGSFLTSNRGLGGMESHGASNRKGPMDNKQGNNIQRIKKPLRMNVNEDPGRVVHISELQRGRCMNRDLIKLAEPFGKVTNFLLIKSKGEGFVELAYPEAAQAMVKFYQMKPTFVDGNFIRAELSQKYKKLTIKGKESEDRCRVVHISNLPSVGYSDSDIVRLGTPFGKVTNYLLMRVKNQVFLEMETHHIAMTMIEKFKKIPLMFHGRELKVYLSQKYKNLVLRKQGRGVDELLGIKERENRKRGRSHSPPSKRARSPTNKRKAQETLDTSKESDQDSAQMGSPSGEEETDQKEMDGVNVENIKSTSGPSTGTENCEELDGSVDLLTYHESMNIESDLSGKEGDKEVESEREIEIGHFNDGEVNDAEPSSQNTKPLNEKRSGGIHCPEYTEELFAHDEIDDENSVLSKKIRSMQGDKVDANLVKEDQDVKTQSCDTRCTLDEKAEPDIQSGDGLMKSSPKCVELTTEQIQVLSPLPDEYKLGPYKPNNPVGLDYVVPKTGFYCKLCCLFYTREETAKQTHCGTIEHYQRLKEVLDKQAVGYWKEKQQQVIPSD
SIO_010081: LOC116978207
subclass of: SO_0000673
so part of: LOC116978207
location: join(928671..929675,940037..940098,940974..941012,943250..943365,949175..949248,950752..950889,952180..952311,953917..954057,957274..957405,957864..957916,962579..962990,966804..967137,970298..970419,973330..973398)
location: region:928671-973398:1
so has part: feature:928671-929675:1:exon
so has part: feature:940037-940098:1:exon
so has part: feature:940974-941012:1:exon
so has part: feature:943250-943365:1:exon
so has part: feature:949175-949248:1:exon
so has part: feature:950752-950889:1:exon
so has part: feature:952180-952311:1:exon
so has part: feature:953917-954057:1:exon
so has part: feature:957274-957405:1:exon
so has part: feature:957864-957916:1:exon
so has part: feature:962579-962990:1:exon
so has part: feature:966804-967137:1:exon
so has part: feature:970298-970419:1:exon
so has part: feature:973330-973398:1:exon

XP_032885075.1
type: Protein
SIO_000068: ncbiprotein

position:928671:1
position: 928671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:973398:1
position: 973398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:928671-929675:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:940037-940098:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:940974-941012:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:943250-943365:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:949175-949248:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:950752-950889:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:952180-952311:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:953917-954057:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:957274-957405:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:957864-957916:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:962579-962990:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:966804-967137:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:970298-970419:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:973330-973398:1:exon

LOC116978207
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116978207
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: matrin-3-like isoform X1
translation: MASYGRGNQMRAKRKSRFHDAEGGGHAAGPSLNIQAALGTLCQNPHLAGLINSGQGQNYGPQGVGPGQNFGPQSAGQGQNFGLQGVGQRVKGLISSAGGPSRYSDTASNSLPSLFGVRNQNQQSHAHQKQIDADRASNILAAFGLSSRDLDELSHYPEDKLTPESLPEILMEIKRRRANEGASSKYNRGDGSLRHDRSYRASHDDWEEERHFRKHNYASRDSSLDSVVEYGHGHSSRESSSRYDRKDYERERLRGNDDFSREEMHLSESSHNFNKFDSDYGRSARLPSPRTHERSLFERKRGSPSLNNINDYHGFLPAVFPYLCSLCDLTIHSVQDWNQHNNSSTHRRLCDLLVEIYPEWNPDVFPSQMGDPLVLQSTNLAPGILGPPPSGSFLTSNRGLGGMESHGASNRKGPMDNKQGNNIQRIKKPLRMNVNEDPGRVVHISELQRGRCMNRDLIKLAEPFGKVTNFLLIKSKGEGFVELAYPEAAQAMVKFYQMKPTFVDGNFIRAELSQKYKKLTIKGKESEDRCRVVHISNLPSVGYSDSDIVRLGTPFGKVTNYLLMRVKNQVFLEMETHHIAMTMIEKFKKIPLMFHGRELKVYLSQKYKNLVLRKQGRGVDELLGIKERENRKRGRSHSPPSKRARSPTNKRKAQETLDTSKESDQDSAQMGSPSGEEETDQKEMDGVNVENIKSTSGPSTGTENCEELDGSVDLLTYHESMNIESDLSGKEGDKEVESEREIEIGHFNDGEVNDAEPSSQNTKPLNEKRSGGIHCPEYTEELFAHDEIDDENSVLSKKIRSMQGDKVDANLVKEDQDVKTQSCDTRCTLDEKAEPDIQSGDGLMKSSPKCVELTTEQIQVLSPLPDEYKLGPYKPNNPVGLDYVVPKTGFYCKLCCLFYTREETAKQTHCGTIEHYQRLKEVLDKQAVGYWKEKQQQVIPSD
SIO_010081: LOC116978207
subclass of: SO_0000673
so part of: LOC116978207
location: join(928671..929675,940037..940098,940974..941012,943250..943365,949175..949248,950752..950889,952180..952311,953917..954057,957274..957405,957864..957916,962579..962990,966804..967137,970298..970419,973330..973398)
location: region:928671-973398:1
so has part: feature:928671-929675:1:exon
so has part: feature:940037-940098:1:exon
so has part: feature:940974-941012:1:exon
so has part: feature:943250-943365:1:exon
so has part: feature:949175-949248:1:exon
so has part: feature:950752-950889:1:exon
so has part: feature:952180-952311:1:exon
so has part: feature:953917-954057:1:exon
so has part: feature:957274-957405:1:exon
so has part: feature:957864-957916:1:exon
so has part: feature:962579-962990:1:exon
so has part: feature:966804-967137:1:exon
so has part: feature:970298-970419:1:exon
so has part: feature:973330-973398:1:exon

XP_032885076.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:928671-929675:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:940037-940098:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:940974-941012:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:943250-943365:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:949175-949248:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:950752-950889:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:952180-952311:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:953917-954057:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:957274-957405:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:957864-957916:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:962579-962990:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:966804-967137:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:970298-970419:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:973330-973398:1:exon

LOC116978207
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116978207
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: matrin-3-like isoform X2
translation: MASYGRGNQMRAKRKSRFHDAEGGGHAAGPSLNIQAALGTLCQNPHLAGLINSGQGQNYGPQGVGPGQNFGPQSAGQGQNFGLQGVGQRVKGLISSAGGPSRYSDTASNSLPSLFGVRNQNQQSHAHQKQIDADRASNILAAFGLSSRDLDELSHYPEDKLTPESLPEILMEIKRRRANEGASSKYNRGDGSLRHDRSYRASHDDWEEERHFRKHNYASRDSSLDSVVEYGHGHSSRESSSRYDRKDYERERLRGNDDFSREEMHLSESSHNFNKFDSDYGRSARLPSPRTHERSLFERKRGSPSLNNINDYHGFLPAVFPYLCSLCDLTIHSVQDWNQHNNSSTHRRLCDLLVEIYPEWNPDVFPSQMGDPLVLQSTNLAPGILGPPPSGSFLTSNRGLGGMESHGASNRKGPMDNKQGNNIQRIKKPLRMNVNEDPGRVVHISELQRGRCMNRDLIKLAEPFGKVTNFLLIKSKGEGFVELAYPEAAQAMVKFYQMKPTFVDGNFIRAELSQKYKKLTIKGKESEDRCRVVHISNLPSVGYSDSDIVRLGTPFGKVTNYLLMRVKNQVFLEMETHHIAMTMIEKFKKIPLMFHGRELKVYLSQKYKNLVLRKQGRGVDELLGIKERENRKRGRSHSPPSKRARSPTNKRKAQETLDTSKESDQDSAQMGSPSGEEETDQKEMDGVNVENIKSTSGPSTGTENCEELDGSVDLLTYHESMNIESDLSGKEGDKEVESEREIEIGHFNDGEVNDAEPSSQNTKPLNEKKIRSMQGDKVDANLVKEDQDVKTQSCDTRCTLDEKAEPDIQSGDGLMKSSPKCVELTTEQIQVLSPLPDEYKLGPYKPNNPVGLDYVVPKTGFYCKLCCLFYTREETAKQTHCGTIEHYQRLKEVLDKQAVGYWKEKQQQVIPSD
SIO_010081: LOC116978207
subclass of: SO_0000673
so part of: LOC116978207
location: join(928671..929675,940037..940098,940974..941012,943250..943365,949175..949248,950752..950889,952180..952311,953917..954057,957274..957405,957864..957916,962579..962990,966891..967137,970298..970419,973330..973398)
location: region:928671-973398:1
so has part: feature:928671-929675:1:exon
so has part: feature:940037-940098:1:exon
so has part: feature:940974-941012:1:exon
so has part: feature:943250-943365:1:exon
so has part: feature:949175-949248:1:exon
so has part: feature:950752-950889:1:exon
so has part: feature:952180-952311:1:exon
so has part: feature:953917-954057:1:exon
so has part: feature:957274-957405:1:exon
so has part: feature:957864-957916:1:exon
so has part: feature:962579-962990:1:exon
so has part: feature:966891-967137:1:exon
so has part: feature:970298-970419:1:exon
so has part: feature:973330-973398:1:exon

XP_032885077.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:928671-929675:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:940037-940098:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:940974-941012:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:943250-943365:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:949175-949248:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:950752-950889:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:952180-952311:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:953917-954057:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:957274-957405:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:957864-957916:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:962579-962990:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:966891-967137:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:970298-970419:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:973330-973398:1:exon

LOC116978757
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116978757
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(982650..997532)
location: region:982650-997532:-1
so has part: feature:982650-997532:-1:exon
subclass of: SO_0000010

116978757
type: Gene
SIO_000068: ncbigene

position:982650:-1
position: 982650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:997532:-1
position: 997532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:982650-997532:-1:exon

LOC116978757
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116978757
product: cytochrome P450 26B1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 54 Proteins, and 31% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033030062.1
SIO_010081: LOC116978757
subclass of: SO_0000673
so part of: LOC116978757
location: complement(join(982650..982988,983537..983797,989577..989732,994230..994505,996155..996379,997335..997532))
location: region:982650-997532:-1
so has part: feature:997335-997532:-1:exon
so has part: feature:996155-996379:-1:exon
so has part: feature:994230-994505:-1:exon
so has part: feature:989577-989732:-1:exon
so has part: feature:983537-983797:-1:exon
so has part: feature:982650-982988:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:997335-997532:-1:exon

position:997335:-1
position: 997335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:996155-996379:-1:exon

position:996155:-1
position: 996155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:996379:-1
position: 996379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:994230-994505:-1:exon

position:994230:-1
position: 994230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:994505:-1
position: 994505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:989577-989732:-1:exon

position:989577:-1
position: 989577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:989732:-1
position: 989732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:983537-983797:-1:exon

position:983537:-1
position: 983537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:983797:-1
position: 983797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:982650-982988:-1:exon

position:982988:-1
position: 982988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116978757
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116978757
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome P450 26B1-like
translation: MVLVAVWPILVSIFISVAPAVLLVTASIYLWHLRWQLSHDRSWLLPLPPGSMGLPIVGETLHWLLQGCEFHSSRRRQHGHVFKTHLLGRPVVRVSGAALLPPLLLEETSRVGVSWPRSAHDMLGPHSLANSSGHTHRARRKVYARIFSQAALESYLPQIMKLVREAVTGWCARPGSVSVYPESKRLTLRIAAAVLLGSLPSQEELTDLFTNMEQLSENIFTLPIDIPGSGYRKGIRARDKLHQYLGKVIEARRQAGGCEDQPGALGILARSSKEQGMDMGVQELTEAAVELMFAAFATTASAATSLVLQLIKHPAVVAKLREELQTRALGAGALLRDISRLRYLDNVVKEVLRMLPPVSGGYRVALHTFELAGFQIPKGWSVLYSIRDTHNTSPIFQDPEVFNPDRFDEDQMESKNLRFHYLPFGDGVRRCVGKELAKLILKVFAIELVSVSHWELTTRTFPKMLLVPIVHPADGLQVRFFSSA
SIO_010081: LOC116978757
subclass of: SO_0000673
so part of: LOC116978757
location: complement(join(982650..982988,983537..983797,989577..989732,994230..994505,996155..996379,997335..997532))
location: region:982650-997532:-1
so has part: feature:997335-997532:-1:exon
so has part: feature:996155-996379:-1:exon
so has part: feature:994230-994505:-1:exon
so has part: feature:989577-989732:-1:exon
so has part: feature:983537-983797:-1:exon
so has part: feature:982650-982988:-1:exon

XP_032885953.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:997335-997532:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:996155-996379:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:994230-994505:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:989577-989732:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:983537-983797:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:982650-982988:-1:exon

LOC116978758
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116978758
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1000279..1001019
location: region:1000279-1001019:1
so has part: feature:1000279-1001019:1:exon
subclass of: SO_0000010

116978758
type: Gene
SIO_000068: ncbigene

position:1000279:1
position: 1000279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1001019:1
position: 1001019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1000279-1001019:1:exon

LOC116978758
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116978758
product: putative uncharacterized protein DDB_G0291608
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_033030063.1
SIO_010081: LOC116978758
subclass of: SO_0000673
so part of: LOC116978758
location: 1000279..1001019
location: region:1000279-1001019:1
so has part: feature:1000279-1001019:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1000279-1001019:1:exon

LOC116978758
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116978758
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative uncharacterized protein DDB_G0291608
translation: MYFHTPITPHLDPHSHHTSPGPTLPSHLTWTHTPITPHLDPHSHHTSPGPTLPSHLTWTHTPITPHLDPHSHHTSPGPTLPSHLTWTHTPITPHLDPHSHHTSPGPTLPSHLTWTHTPITPHLDPHSHHTSPGPTLPSHLTWTHTPITPHLDPHSHHTSPGPTLPSHLTWTHTPITPHLDPHSHHTSPGPTLPSHLNRDPHSHHTTPGPTLPSHLNRDPHSHHTSTETHTPITPQPRPTHLAWVHW
SIO_010081: LOC116978758
subclass of: SO_0000673
so part of: LOC116978758
location: 1000279..1001019
location: region:1000279-1001019:1
so has part: feature:1000279-1001019:1:exon

XP_032885954.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1000279-1001019:1:exon

LOC116978730
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116978730
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1038975..1040329
location: region:1038975-1040329:1
so has part: feature:1038975-1040329:1:exon
subclass of: SO_0000011

116978730
type: Gene
SIO_000068: ncbigene

position:1038975:1
position: 1038975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1040329:1
position: 1040329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1038975-1040329:1:exon

LOC116978730
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116978730
product: uncharacterized LOC116978730
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004413525.1
SIO_010081: LOC116978730
subclass of: SO_0000673
so part of: LOC116978730
location: join(1038975..1039011,1040243..1040329)
location: region:1038975-1040329:1
so has part: feature:1038975-1039011:1:exon
so has part: feature:1040243-1040329:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1038975-1039011:1:exon

position:1039011:1
position: 1039011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1040243-1040329:1:exon

position:1040243:1
position: 1040243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116978209
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116978209
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1044534..1045652
location: region:1044534-1045652:1
so has part: feature:1044534-1045652:1:exon
subclass of: SO_0000010

116978209
type: Gene
SIO_000068: ncbigene

position:1044534:1
position: 1044534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1045652:1
position: 1045652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1044534-1045652:1:exon

LOC116978209
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116978209
product: actin-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 704 Proteins, and 4% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033029187.1
SIO_010081: LOC116978209
subclass of: SO_0000673
so part of: LOC116978209
location: 1044534..1045652
location: region:1044534-1045652:1
so has part: feature:1044534-1045652:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1044534-1045652:1:exon

LOC116978209
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116978209
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin-1-like
translation: MMANPAVIIDNGSGLCKSGIVGDSIPTSVVPSIVGCSRATKGARNANLKDYYVGKAAQTRREVLSLKYPIERGVVTSWEEMEMIWRYIYGFELRVKPKERPILLTAAPLTPFLNRERMAEIMFEGFSVPAMYIAIPATLALYSSGRTRGVVLDSGYGITDAVPIYEGYYLPDAVQRLHLAGSDINESLWRILLENGHSFAEKAEADVIQDIKEKLCYVSLDSKVESNKPAEEIQREYRLPDGTQVLISNELFRAPELLFTPESPGLKDSGIDKLLLNSIALCEPGLHKELSSNMLLSGGSTLLPGMEERLLKELKLHTPTDVPVKITAPPERNYSVWMGASILTSLSSFKHMWITLNDYNDFGPSVVNKRCF
SIO_010081: LOC116978209
subclass of: SO_0000673
so part of: LOC116978209
location: 1044534..1045652
location: region:1044534-1045652:1
so has part: feature:1044534-1045652:1:exon

XP_032885078.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1044534-1045652:1:exon

LOC116978210
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116978210
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1066250..1127577
location: region:1066250-1127577:1
so has part: feature:1066250-1127577:1:exon
subclass of: SO_0000010

116978210
type: Gene
SIO_000068: ncbigene

position:1066250:1
position: 1066250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1127577:1
position: 1127577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1066250-1127577:1:exon

LOC116978210
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116978210
product: shootin-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033029188.1
SIO_010081: LOC116978210
subclass of: SO_0000673
so part of: LOC116978210
location: join(1066250..1066474,1078115..1078175,1093090..1093184,1093452..1093608,1094976..1095073,1097050..1097131,1099848..1099942,1101273..1101419,1102413..1102566,1103686..1103845,1104457..1104527,1108585..1108685,1109301..1109318,1112765..1112824,1114686..1114803,1121671..1121818,1125431..1127577)
location: region:1066250-1127577:1
so has part: feature:1066250-1066474:1:exon
so has part: feature:1078115-1078175:1:exon
so has part: feature:1093090-1093184:1:exon
so has part: feature:1093452-1093608:1:exon
so has part: feature:1094976-1095073:1:exon
so has part: feature:1097050-1097131:1:exon
so has part: feature:1099848-1099942:1:exon
so has part: feature:1101273-1101419:1:exon
so has part: feature:1102413-1102566:1:exon
so has part: feature:1103686-1103845:1:exon
so has part: feature:1104457-1104527:1:exon
so has part: feature:1108585-1108685:1:exon
so has part: feature:1109301-1109318:1:exon
so has part: feature:1112765-1112824:1:exon
so has part: feature:1114686-1114803:1:exon
so has part: feature:1121671-1121818:1:exon
so has part: feature:1125431-1127577:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1066250-1066474:1:exon

position:1066474:1
position: 1066474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1078115-1078175:1:exon

position:1078115:1
position: 1078115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1078175:1
position: 1078175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1093090-1093184:1:exon

position:1093090:1
position: 1093090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1093184:1
position: 1093184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1093452-1093608:1:exon

position:1093452:1
position: 1093452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1093608:1
position: 1093608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1094976-1095073:1:exon

position:1094976:1
position: 1094976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1095073:1
position: 1095073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1097050-1097131:1:exon

position:1097050:1
position: 1097050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1097131:1
position: 1097131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1099848-1099942:1:exon

position:1099848:1
position: 1099848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1099942:1
position: 1099942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1101273-1101419:1:exon

position:1101273:1
position: 1101273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1101419:1
position: 1101419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1102413-1102566:1:exon

position:1102413:1
position: 1102413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1102566:1
position: 1102566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1103686-1103845:1:exon

position:1103686:1
position: 1103686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1103845:1
position: 1103845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1104457-1104527:1:exon

position:1104457:1
position: 1104457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1104527:1
position: 1104527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1108585-1108685:1:exon

position:1108585:1
position: 1108585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1108685:1
position: 1108685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1109301-1109318:1:exon

position:1109301:1
position: 1109301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1109318:1
position: 1109318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1112765-1112824:1:exon

position:1112765:1
position: 1112765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1112824:1
position: 1112824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1114686-1114803:1:exon

position:1114686:1
position: 1114686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1114803:1
position: 1114803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1121671-1121818:1:exon

position:1121671:1
position: 1121671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1121818:1
position: 1121818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1125431-1127577:1:exon

position:1125431:1
position: 1125431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116978210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116978210
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: shootin-1-like
translation: MLPCPSTPAIREELVHEEQHEVGKMKVECKRLVRERDEAERQLKQIKRVSQMVIEEVNALHTQLEIEKSCRENAEVLATKLSHENKKLKYLSLTSRVCLDDLLPSISDCGAAEEEPQDPSPDPCTQYQQQVKDLQETVTQLLEEKKQLAGQVQELQSNTEEQTSRLEKEQAEMEELQNVLEKQAKTIKSFNRVSMMATQEYEDLRQQLDLEQSLRQEAETFAHEMLIKQKEVNRQSAILLQQVDPSVQLLKALEEVASITKTLEEERRQNQLKIQELESNLNNSVLQKELGMLQKQLEVVEEERRETEQRSQDTEQRNRELEIQVKELQEKLRFQVIESAPSMAPPPPPPPTPPPPPPPPPPPPPPPPLPATRCNPLSSLIAIVRRSSKNTKTQPKPEPSNNQTGIDDVKVKAVNEMMERIRHGVMLRPVTHVSKRKVSHKPSPVDEKAQESAMDELKGILDSMKKSPSRGFPDTGQKAENELEVVLRRRRKQASDYSPRDGSDTDASDSASTKSLSLKDGDYRKSSNLQSSPEPRAPSSEDRESSSSGSYEEIKRKCSTKEEIIQAQGILITVNGQSDSAEQRSSLVQDRSTSEGDSLIQESLDADC
SIO_010081: LOC116978210
subclass of: SO_0000673
so part of: LOC116978210
location: join(1066391..1066474,1078115..1078175,1093090..1093184,1093452..1093608,1094976..1095073,1097050..1097131,1099848..1099942,1101273..1101419,1102413..1102566,1103686..1103845,1104457..1104527,1108585..1108685,1109301..1109318,1112765..1112824,1114686..1114803,1121671..1121818,1125431..1125608)
location: region:1066391-1125608:1
so has part: feature:1066391-1066474:1:exon
so has part: feature:1078115-1078175:1:exon
so has part: feature:1093090-1093184:1:exon
so has part: feature:1093452-1093608:1:exon
so has part: feature:1094976-1095073:1:exon
so has part: feature:1097050-1097131:1:exon
so has part: feature:1099848-1099942:1:exon
so has part: feature:1101273-1101419:1:exon
so has part: feature:1102413-1102566:1:exon
so has part: feature:1103686-1103845:1:exon
so has part: feature:1104457-1104527:1:exon
so has part: feature:1108585-1108685:1:exon
so has part: feature:1109301-1109318:1:exon
so has part: feature:1112765-1112824:1:exon
so has part: feature:1114686-1114803:1:exon
so has part: feature:1121671-1121818:1:exon
so has part: feature:1125431-1125608:1:exon

XP_032885079.1
type: Protein
SIO_000068: ncbiprotein

position:1066391:1
position: 1066391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1125608:1
position: 1125608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1066391-1066474:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1078115-1078175:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1093090-1093184:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1093452-1093608:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1094976-1095073:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1097050-1097131:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1099848-1099942:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1101273-1101419:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1102413-1102566:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1103686-1103845:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1104457-1104527:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1108585-1108685:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1109301-1109318:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1112765-1112824:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1114686-1114803:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1121671-1121818:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1125431-1125608:1:exon

trnaa-agc
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: trnaa-agc
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1132828..1132900
location: region:1132828-1132900:1
so has part: feature:1132828-1132900:1:exon
subclass of: SO_0000663

116978845
type: Gene
SIO_000068: ncbigene

position:1132828:1
position: 1132828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1132900:1
position: 1132900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1132828-1132900:1:exon

trnaa-agc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 386614
gene: trnaa-agc
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA alanine (anticodon AGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1132861..1132863,aa:Ala,seq:agc)
SIO_010081: trnaa-agc
subclass of: SO_0000673
so part of: trnaa-agc
location: 1132828..1132900
location: region:1132828-1132900:1
so has part: feature:1132828-1132900:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1132828-1132900:1:exon

kif20a
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: kif20a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1134018..1166966
location: region:1134018-1166966:1
so has part: feature:1134018-1166966:1:exon
subclass of: SO_0000010

116978211
type: Gene
SIO_000068: ncbigene

position:1134018:1
position: 1134018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1166966:1
position: 1166966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1134018-1166966:1:exon

kif20a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: kif20a
product: kinesin family member 20A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_033029189.1
SIO_010081: kif20a
subclass of: SO_0000673
so part of: kif20a
location: join(1134018..1134109,1140465..1140738,1141201..1141320,1145698..1145836,1146146..1146330,1147371..1147482,1147986..1148183,1148706..1148817,1149772..1149840,1151075..1151218,1152519..1152684,1153276..1153443,1156324..1156463,1157113..1157266,1162062..1162260,1163273..1163364,1164037..1164174,1165878..1166966)
location: region:1134018-1166966:1
so has part: feature:1134018-1134109:1:exon
so has part: feature:1140465-1140738:1:exon
so has part: feature:1141201-1141320:1:exon
so has part: feature:1145698-1145836:1:exon
so has part: feature:1146146-1146330:1:exon
so has part: feature:1147371-1147482:1:exon
so has part: feature:1147986-1148183:1:exon
so has part: feature:1148706-1148817:1:exon
so has part: feature:1149772-1149840:1:exon
so has part: feature:1151075-1151218:1:exon
so has part: feature:1152519-1152684:1:exon
so has part: feature:1153276-1153443:1:exon
so has part: feature:1156324-1156463:1:exon
so has part: feature:1157113-1157266:1:exon
so has part: feature:1162062-1162260:1:exon
so has part: feature:1163273-1163364:1:exon
so has part: feature:1164037-1164174:1:exon
so has part: feature:1165878-1166966:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1134018-1134109:1:exon

position:1134109:1
position: 1134109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1140465-1140738:1:exon

position:1140465:1
position: 1140465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1140738:1
position: 1140738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1141201-1141320:1:exon

position:1141201:1
position: 1141201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1141320:1
position: 1141320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1145698-1145836:1:exon

position:1145698:1
position: 1145698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1145836:1
position: 1145836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1146146-1146330:1:exon

position:1146146:1
position: 1146146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1146330:1
position: 1146330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1147371-1147482:1:exon

position:1147371:1
position: 1147371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1147482:1
position: 1147482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1147986-1148183:1:exon

position:1147986:1
position: 1147986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1148183:1
position: 1148183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1148706-1148817:1:exon

position:1148706:1
position: 1148706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1148817:1
position: 1148817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1149772-1149840:1:exon

position:1149772:1
position: 1149772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1149840:1
position: 1149840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1151075-1151218:1:exon

position:1151075:1
position: 1151075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1151218:1
position: 1151218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1152519-1152684:1:exon

position:1152519:1
position: 1152519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1152684:1
position: 1152684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1153276-1153443:1:exon

position:1153276:1
position: 1153276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1153443:1
position: 1153443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1156324-1156463:1:exon

position:1156324:1
position: 1156324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1156463:1
position: 1156463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1157113-1157266:1:exon

position:1157113:1
position: 1157113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1157266:1
position: 1157266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1162062-1162260:1:exon

position:1162062:1
position: 1162062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1162260:1
position: 1162260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1163273-1163364:1:exon

position:1163273:1
position: 1163273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1163364:1
position: 1163364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1164037-1164174:1:exon

position:1164037:1
position: 1164037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1164174:1
position: 1164174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1165878-1166966:1:exon

position:1165878:1
position: 1165878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

kif20a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: kif20a
product: kinesin family member 20A, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_033029193.1
SIO_010081: kif20a
subclass of: SO_0000673
so part of: kif20a
location: join(1134041..1134099,1140465..1140738,1141201..1141320,1145698..1145836,1146146..1146330,1147371..1147482,1147986..1148183,1148706..1148817,1149772..1149840,1151075..1151218,1152519..1152684,1153276..1153443,1156324..1156463,1157113..1157266,1162062..1162260,1163273..1163364,1164037..1164174,1165878..1166966)
location: region:1134041-1166966:1
so has part: feature:1134041-1134099:1:exon
so has part: feature:1140465-1140738:1:exon
so has part: feature:1141201-1141320:1:exon
so has part: feature:1145698-1145836:1:exon
so has part: feature:1146146-1146330:1:exon
so has part: feature:1147371-1147482:1:exon
so has part: feature:1147986-1148183:1:exon
so has part: feature:1148706-1148817:1:exon
so has part: feature:1149772-1149840:1:exon
so has part: feature:1151075-1151218:1:exon
so has part: feature:1152519-1152684:1:exon
so has part: feature:1153276-1153443:1:exon
so has part: feature:1156324-1156463:1:exon
so has part: feature:1157113-1157266:1:exon
so has part: feature:1162062-1162260:1:exon
so has part: feature:1163273-1163364:1:exon
so has part: feature:1164037-1164174:1:exon
so has part: feature:1165878-1166966:1:exon

position:1134041:1
position: 1134041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1134041-1134099:1:exon

position:1134099:1
position: 1134099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1140465-1140738:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1141201-1141320:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1145698-1145836:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1146146-1146330:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1147371-1147482:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1147986-1148183:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1148706-1148817:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1149772-1149840:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1151075-1151218:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1152519-1152684:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1153276-1153443:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1156324-1156463:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1157113-1157266:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1162062-1162260:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1163273-1163364:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1164037-1164174:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1165878-1166966:1:exon

kif20a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: kif20a
product: kinesin family member 20A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_033029192.1
SIO_010081: kif20a
subclass of: SO_0000673
so part of: kif20a
location: join(1134063..1134114,1140465..1140738,1141201..1141320,1145698..1145836,1146146..1146330,1147371..1147482,1147986..1148183,1148706..1148817,1149772..1149840,1151075..1151218,1152519..1152684,1153276..1153443,1156324..1156463,1157113..1157266,1162062..1162260,1163273..1163364,1164037..1164174,1165878..1166966)
location: region:1134063-1166966:1
so has part: feature:1134063-1134114:1:exon
so has part: feature:1140465-1140738:1:exon
so has part: feature:1141201-1141320:1:exon
so has part: feature:1145698-1145836:1:exon
so has part: feature:1146146-1146330:1:exon
so has part: feature:1147371-1147482:1:exon
so has part: feature:1147986-1148183:1:exon
so has part: feature:1148706-1148817:1:exon
so has part: feature:1149772-1149840:1:exon
so has part: feature:1151075-1151218:1:exon
so has part: feature:1152519-1152684:1:exon
so has part: feature:1153276-1153443:1:exon
so has part: feature:1156324-1156463:1:exon
so has part: feature:1157113-1157266:1:exon
so has part: feature:1162062-1162260:1:exon
so has part: feature:1163273-1163364:1:exon
so has part: feature:1164037-1164174:1:exon
so has part: feature:1165878-1166966:1:exon

position:1134063:1
position: 1134063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1134063-1134114:1:exon

position:1134114:1
position: 1134114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1140465-1140738:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1141201-1141320:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1145698-1145836:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1146146-1146330:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1147371-1147482:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1147986-1148183:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1148706-1148817:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1149772-1149840:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1151075-1151218:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1152519-1152684:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1153276-1153443:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1156324-1156463:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1157113-1157266:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1162062-1162260:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1163273-1163364:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1164037-1164174:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1165878-1166966:1:exon

kif20a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: kif20a
product: kinesin family member 20A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_033029191.1
SIO_010081: kif20a
subclass of: SO_0000673
so part of: kif20a
location: join(1136926..1137762,1140465..1140738,1141201..1141320,1145698..1145836,1146146..1146330,1147371..1147482,1147986..1148183,1148706..1148817,1149772..1149840,1151075..1151218,1152519..1152684,1153276..1153443,1156324..1156463,1157113..1157266,1162062..1162260,1163273..1163364,1164037..1164174,1165878..1166966)
location: region:1136926-1166966:1
so has part: feature:1136926-1137762:1:exon
so has part: feature:1140465-1140738:1:exon
so has part: feature:1141201-1141320:1:exon
so has part: feature:1145698-1145836:1:exon
so has part: feature:1146146-1146330:1:exon
so has part: feature:1147371-1147482:1:exon
so has part: feature:1147986-1148183:1:exon
so has part: feature:1148706-1148817:1:exon
so has part: feature:1149772-1149840:1:exon
so has part: feature:1151075-1151218:1:exon
so has part: feature:1152519-1152684:1:exon
so has part: feature:1153276-1153443:1:exon
so has part: feature:1156324-1156463:1:exon
so has part: feature:1157113-1157266:1:exon
so has part: feature:1162062-1162260:1:exon
so has part: feature:1163273-1163364:1:exon
so has part: feature:1164037-1164174:1:exon
so has part: feature:1165878-1166966:1:exon

position:1136926:1
position: 1136926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1136926-1137762:1:exon

position:1137762:1
position: 1137762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1140465-1140738:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1141201-1141320:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1145698-1145836:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1146146-1146330:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1147371-1147482:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1147986-1148183:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1148706-1148817:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1149772-1149840:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1151075-1151218:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1152519-1152684:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1153276-1153443:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1156324-1156463:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1157113-1157266:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1162062-1162260:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1163273-1163364:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1164037-1164174:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1165878-1166966:1:exon

kif20a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: kif20a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kinesin-like protein KIF20A isoform X2
translation: MVSISSDSRCGWNYSCMKMAAGIISPNIYSDEEEVAILESTSVSGDVKMQLLPDFSVISPANNVQGGSHSGNTAAETAQEVRIKVYLRVRPFTEAELEKGESQDCVLIENSEKLVLRAPKASFAMKSSERGIGQAMHKFTFTQIFDPETPQKMFFNAVMKNLVKEALEGQNCLVYTYGVSNSGKTYTVQGTRQDGGILPRSLAVIFNSVQGKLYPRMDLKPNLCDDVIKLDNKMVRQEELKKLSFLGIVREEDLQTPMKMKPEFRPRECLSYNSDSGIGSMSSVSNLEEATSRWADQDTVVFQQEEHFQYSIWVSFFEIYNELAYDLLDTAPTANRKRQTLKLCEDKNGNTYVKDLTWINVGDAQEAWKILKVGRKNQSIASTHVNQNSSRSHSIFSIRIIHVSEDWKSVLKTSELTLCDLAGSERCKEQKCGSRMKEATNINTSLHTLGRCIGALRQNQQIKSKPNVVPFRDSKLTRVFQGFFTNHGKSCMIVNINQCASTYDETLHAMKFSAIASQLIQAPSMKLFPSIRALLREHDGWHNCDAQEPVEEEEYEEEESDDEDDPDISTLEKESLQKIIECLRQHLINEKREKLLMESEIRQSVVDEMTEQYNVMETHWSEQLEEQKESLEDAFEAKMKNYQEYVKFYYQQSSADEEGSESDDEMCDGEALSVKIHELEATIQQLKAERKSSVQPTRQSARLASVGLRGELHAIQLELANTRAELEQSKAEAALGVEELKRYKEMVEPPAGMKHLTINADLKLESGQRNAKALQKELQKIEQALQISERACCHNTEAEKLRHTLAKCQDLMLKQDQTLAELQKLMIVLKLDMKHKNACIAEQYHVVRQLQDSPGCHKRRCAGNVENQPPREKRPFLTGLLTPVRHANQQRSNTPSNYILRSRARLDRPLQRVEARFHVNY
SIO_010081: kif20a
subclass of: SO_0000673
so part of: kif20a
location: join(1137728..1137762,1140465..1140738,1141201..1141320,1145698..1145836,1146146..1146330,1147371..1147482,1147986..1148183,1148706..1148817,1149772..1149840,1151075..1151218,1152519..1152684,1153276..1153443,1156324..1156463,1157113..1157266,1162062..1162260,1163273..1163364,1164037..1164174,1165878..1166198)
location: region:1137728-1166198:1
so has part: feature:1137728-1137762:1:exon
so has part: feature:1140465-1140738:1:exon
so has part: feature:1141201-1141320:1:exon
so has part: feature:1145698-1145836:1:exon
so has part: feature:1146146-1146330:1:exon
so has part: feature:1147371-1147482:1:exon
so has part: feature:1147986-1148183:1:exon
so has part: feature:1148706-1148817:1:exon
so has part: feature:1149772-1149840:1:exon
so has part: feature:1151075-1151218:1:exon
so has part: feature:1152519-1152684:1:exon
so has part: feature:1153276-1153443:1:exon
so has part: feature:1156324-1156463:1:exon
so has part: feature:1157113-1157266:1:exon
so has part: feature:1162062-1162260:1:exon
so has part: feature:1163273-1163364:1:exon
so has part: feature:1164037-1164174:1:exon
so has part: feature:1165878-1166198:1:exon

XP_032885082.1
type: Protein
SIO_000068: ncbiprotein

position:1137728:1
position: 1137728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1166198:1
position: 1166198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1137728-1137762:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1140465-1140738:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1141201-1141320:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1145698-1145836:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1146146-1146330:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1147371-1147482:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1147986-1148183:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1148706-1148817:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1149772-1149840:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1151075-1151218:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1152519-1152684:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1153276-1153443:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1156324-1156463:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1157113-1157266:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1162062-1162260:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1163273-1163364:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1164037-1164174:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1165878-1166198:1:exon

kif20a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: kif20a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kinesin-like protein KIF20A isoform X1
translation: MKMAAGIISPNIYSDEEEVAILESTSVSGDVKMQLLPDFSVISPANNVQGGSHSGNTAAETAQEVRIKVYLRVRPFTEAELEKGESQDCVLIENSEKLVLRAPKASFAMKSSERGIGQAMHKFTFTQIFDPETPQKMFFNAVMKNLVKEALEGQNCLVYTYGVSNSGKTYTVQGTRQDGGILPRSLAVIFNSVQGKLYPRMDLKPNLCDDVIKLDNKMVRQEELKKLSFLGIVREEDLQTPMKMKPEFRPRECLSYNSDSGIGSMSSVSNLEEATSRWADQDTVVFQQEEHFQYSIWVSFFEIYNELAYDLLDTAPTANRKRQTLKLCEDKNGNTYVKDLTWINVGDAQEAWKILKVGRKNQSIASTHVNQNSSRSHSIFSIRIIHVSEDWKSVLKTSELTLCDLAGSERCKEQKCGSRMKEATNINTSLHTLGRCIGALRQNQQIKSKPNVVPFRDSKLTRVFQGFFTNHGKSCMIVNINQCASTYDETLHAMKFSAIASQLIQAPSMKLFPSIRALLREHDGWHNCDAQEPVEEEEYEEEESDDEDDPDISTLEKESLQKIIECLRQHLINEKREKLLMESEIRQSVVDEMTEQYNVMETHWSEQLEEQKESLEDAFEAKMKNYQEYVKFYYQQSSADEEGSESDDEMCDGEALSVKIHELEATIQQLKAERKSSVQPTRQSARLASVGLRGELHAIQLELANTRAELEQSKAEAALGVEELKRYKEMVEPPAGMKHLTINADLKLESGQRNAKALQKELQKIEQALQISERACCHNTEAEKLRHTLAKCQDLMLKQDQTLAELQKLMIVLKLDMKHKNACIAEQYHVVRQLQDSPGCHKRRCAGNVENQPPREKRPFLTGLLTPVRHANQQRSNTPSNYILRSRARLDRPLQRVEARFHVNY
SIO_010081: kif20a
subclass of: SO_0000673
so part of: kif20a
location: join(1140478..1140738,1141201..1141320,1145698..1145836,1146146..1146330,1147371..1147482,1147986..1148183,1148706..1148817,1149772..1149840,1151075..1151218,1152519..1152684,1153276..1153443,1156324..1156463,1157113..1157266,1162062..1162260,1163273..1163364,1164037..1164174,1165878..1166198)
location: region:1140478-1166198:1
so has part: feature:1140478-1140738:1:exon
so has part: feature:1141201-1141320:1:exon
so has part: feature:1145698-1145836:1:exon
so has part: feature:1146146-1146330:1:exon
so has part: feature:1147371-1147482:1:exon
so has part: feature:1147986-1148183:1:exon
so has part: feature:1148706-1148817:1:exon
so has part: feature:1149772-1149840:1:exon
so has part: feature:1151075-1151218:1:exon
so has part: feature:1152519-1152684:1:exon
so has part: feature:1153276-1153443:1:exon
so has part: feature:1156324-1156463:1:exon
so has part: feature:1157113-1157266:1:exon
so has part: feature:1162062-1162260:1:exon
so has part: feature:1163273-1163364:1:exon
so has part: feature:1164037-1164174:1:exon
so has part: feature:1165878-1166198:1:exon

XP_032885080.1
type: Protein
SIO_000068: ncbiprotein

position:1140478:1
position: 1140478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1140478-1140738:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1141201-1141320:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1145698-1145836:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1146146-1146330:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1147371-1147482:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1147986-1148183:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1148706-1148817:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1149772-1149840:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1151075-1151218:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1152519-1152684:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1153276-1153443:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1156324-1156463:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1157113-1157266:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1162062-1162260:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1163273-1163364:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1164037-1164174:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1165878-1166198:1:exon

kif20a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: kif20a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kinesin-like protein KIF20A isoform X1
translation: MKMAAGIISPNIYSDEEEVAILESTSVSGDVKMQLLPDFSVISPANNVQGGSHSGNTAAETAQEVRIKVYLRVRPFTEAELEKGESQDCVLIENSEKLVLRAPKASFAMKSSERGIGQAMHKFTFTQIFDPETPQKMFFNAVMKNLVKEALEGQNCLVYTYGVSNSGKTYTVQGTRQDGGILPRSLAVIFNSVQGKLYPRMDLKPNLCDDVIKLDNKMVRQEELKKLSFLGIVREEDLQTPMKMKPEFRPRECLSYNSDSGIGSMSSVSNLEEATSRWADQDTVVFQQEEHFQYSIWVSFFEIYNELAYDLLDTAPTANRKRQTLKLCEDKNGNTYVKDLTWINVGDAQEAWKILKVGRKNQSIASTHVNQNSSRSHSIFSIRIIHVSEDWKSVLKTSELTLCDLAGSERCKEQKCGSRMKEATNINTSLHTLGRCIGALRQNQQIKSKPNVVPFRDSKLTRVFQGFFTNHGKSCMIVNINQCASTYDETLHAMKFSAIASQLIQAPSMKLFPSIRALLREHDGWHNCDAQEPVEEEEYEEEESDDEDDPDISTLEKESLQKIIECLRQHLINEKREKLLMESEIRQSVVDEMTEQYNVMETHWSEQLEEQKESLEDAFEAKMKNYQEYVKFYYQQSSADEEGSESDDEMCDGEALSVKIHELEATIQQLKAERKSSVQPTRQSARLASVGLRGELHAIQLELANTRAELEQSKAEAALGVEELKRYKEMVEPPAGMKHLTINADLKLESGQRNAKALQKELQKIEQALQISERACCHNTEAEKLRHTLAKCQDLMLKQDQTLAELQKLMIVLKLDMKHKNACIAEQYHVVRQLQDSPGCHKRRCAGNVENQPPREKRPFLTGLLTPVRHANQQRSNTPSNYILRSRARLDRPLQRVEARFHVNY
SIO_010081: kif20a
subclass of: SO_0000673
so part of: kif20a
location: join(1140478..1140738,1141201..1141320,1145698..1145836,1146146..1146330,1147371..1147482,1147986..1148183,1148706..1148817,1149772..1149840,1151075..1151218,1152519..1152684,1153276..1153443,1156324..1156463,1157113..1157266,1162062..1162260,1163273..1163364,1164037..1164174,1165878..1166198)
location: region:1140478-1166198:1
so has part: feature:1140478-1140738:1:exon
so has part: feature:1141201-1141320:1:exon
so has part: feature:1145698-1145836:1:exon
so has part: feature:1146146-1146330:1:exon
so has part: feature:1147371-1147482:1:exon
so has part: feature:1147986-1148183:1:exon
so has part: feature:1148706-1148817:1:exon
so has part: feature:1149772-1149840:1:exon
so has part: feature:1151075-1151218:1:exon
so has part: feature:1152519-1152684:1:exon
so has part: feature:1153276-1153443:1:exon
so has part: feature:1156324-1156463:1:exon
so has part: feature:1157113-1157266:1:exon
so has part: feature:1162062-1162260:1:exon
so has part: feature:1163273-1163364:1:exon
so has part: feature:1164037-1164174:1:exon
so has part: feature:1165878-1166198:1:exon

XP_032885083.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1140478-1140738:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1141201-1141320:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1145698-1145836:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1146146-1146330:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1147371-1147482:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1147986-1148183:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1148706-1148817:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1149772-1149840:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1151075-1151218:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1152519-1152684:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1153276-1153443:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1156324-1156463:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1157113-1157266:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1162062-1162260:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1163273-1163364:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1164037-1164174:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1165878-1166198:1:exon

kif20a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: kif20a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kinesin-like protein KIF20A isoform X1
translation: MKMAAGIISPNIYSDEEEVAILESTSVSGDVKMQLLPDFSVISPANNVQGGSHSGNTAAETAQEVRIKVYLRVRPFTEAELEKGESQDCVLIENSEKLVLRAPKASFAMKSSERGIGQAMHKFTFTQIFDPETPQKMFFNAVMKNLVKEALEGQNCLVYTYGVSNSGKTYTVQGTRQDGGILPRSLAVIFNSVQGKLYPRMDLKPNLCDDVIKLDNKMVRQEELKKLSFLGIVREEDLQTPMKMKPEFRPRECLSYNSDSGIGSMSSVSNLEEATSRWADQDTVVFQQEEHFQYSIWVSFFEIYNELAYDLLDTAPTANRKRQTLKLCEDKNGNTYVKDLTWINVGDAQEAWKILKVGRKNQSIASTHVNQNSSRSHSIFSIRIIHVSEDWKSVLKTSELTLCDLAGSERCKEQKCGSRMKEATNINTSLHTLGRCIGALRQNQQIKSKPNVVPFRDSKLTRVFQGFFTNHGKSCMIVNINQCASTYDETLHAMKFSAIASQLIQAPSMKLFPSIRALLREHDGWHNCDAQEPVEEEEYEEEESDDEDDPDISTLEKESLQKIIECLRQHLINEKREKLLMESEIRQSVVDEMTEQYNVMETHWSEQLEEQKESLEDAFEAKMKNYQEYVKFYYQQSSADEEGSESDDEMCDGEALSVKIHELEATIQQLKAERKSSVQPTRQSARLASVGLRGELHAIQLELANTRAELEQSKAEAALGVEELKRYKEMVEPPAGMKHLTINADLKLESGQRNAKALQKELQKIEQALQISERACCHNTEAEKLRHTLAKCQDLMLKQDQTLAELQKLMIVLKLDMKHKNACIAEQYHVVRQLQDSPGCHKRRCAGNVENQPPREKRPFLTGLLTPVRHANQQRSNTPSNYILRSRARLDRPLQRVEARFHVNY
SIO_010081: kif20a
subclass of: SO_0000673
so part of: kif20a
location: join(1140478..1140738,1141201..1141320,1145698..1145836,1146146..1146330,1147371..1147482,1147986..1148183,1148706..1148817,1149772..1149840,1151075..1151218,1152519..1152684,1153276..1153443,1156324..1156463,1157113..1157266,1162062..1162260,1163273..1163364,1164037..1164174,1165878..1166198)
location: region:1140478-1166198:1
so has part: feature:1140478-1140738:1:exon
so has part: feature:1141201-1141320:1:exon
so has part: feature:1145698-1145836:1:exon
so has part: feature:1146146-1146330:1:exon
so has part: feature:1147371-1147482:1:exon
so has part: feature:1147986-1148183:1:exon
so has part: feature:1148706-1148817:1:exon
so has part: feature:1149772-1149840:1:exon
so has part: feature:1151075-1151218:1:exon
so has part: feature:1152519-1152684:1:exon
so has part: feature:1153276-1153443:1:exon
so has part: feature:1156324-1156463:1:exon
so has part: feature:1157113-1157266:1:exon
so has part: feature:1162062-1162260:1:exon
so has part: feature:1163273-1163364:1:exon
so has part: feature:1164037-1164174:1:exon
so has part: feature:1165878-1166198:1:exon

XP_032885084.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1140478-1140738:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1141201-1141320:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1145698-1145836:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1146146-1146330:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1147371-1147482:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1147986-1148183:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1148706-1148817:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1149772-1149840:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1151075-1151218:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1152519-1152684:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1153276-1153443:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1156324-1156463:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1157113-1157266:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1162062-1162260:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1163273-1163364:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1164037-1164174:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1165878-1166198:1:exon

cdc23
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: cdc23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1166845..1559099)
location: region:1166845-1559099:-1
so has part: feature:1166845-1559099:-1:exon
subclass of: SO_0000010

116978212
type: Gene
SIO_000068: ncbigene

position:1166845:-1
position: 1166845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1559099:-1
position: 1559099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1166845-1559099:-1:exon

cdc23
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: cdc23
product: cell division cycle 23
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_033029194.1
SIO_010081: cdc23
subclass of: SO_0000673
so part of: cdc23
location: complement(join(1166845..1167737,1168391..1168510,1170593..1170671,1170835..1170896,1171530..1171605,1172241..1172360,1175960..1176113,1176378..1176459,1178374..1178471,1180420..1180597,1181182..1181314,1182464..1182569,1184688..1184730,1185619..1185756,1186121..1186193,1558972..1559099))
location: region:1166845-1559099:-1
so has part: feature:1558972-1559099:-1:exon
so has part: feature:1186121-1186193:-1:exon
so has part: feature:1185619-1185756:-1:exon
so has part: feature:1184688-1184730:-1:exon
so has part: feature:1182464-1182569:-1:exon
so has part: feature:1181182-1181314:-1:exon
so has part: feature:1180420-1180597:-1:exon
so has part: feature:1178374-1178471:-1:exon
so has part: feature:1176378-1176459:-1:exon
so has part: feature:1175960-1176113:-1:exon
so has part: feature:1172241-1172360:-1:exon
so has part: feature:1171530-1171605:-1:exon
so has part: feature:1170835-1170896:-1:exon
so has part: feature:1170593-1170671:-1:exon
so has part: feature:1168391-1168510:-1:exon
so has part: feature:1166845-1167737:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1558972-1559099:-1:exon

position:1558972:-1
position: 1558972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1186121-1186193:-1:exon

position:1186121:-1
position: 1186121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1186193:-1
position: 1186193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1185619-1185756:-1:exon

position:1185619:-1
position: 1185619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1185756:-1
position: 1185756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1184688-1184730:-1:exon

position:1184688:-1
position: 1184688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1184730:-1
position: 1184730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1182464-1182569:-1:exon

position:1182464:-1
position: 1182464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1182569:-1
position: 1182569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1181182-1181314:-1:exon

position:1181182:-1
position: 1181182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1181314:-1
position: 1181314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1180420-1180597:-1:exon

position:1180420:-1
position: 1180420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1180597:-1
position: 1180597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1178374-1178471:-1:exon

position:1178374:-1
position: 1178374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1178471:-1
position: 1178471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1176378-1176459:-1:exon

position:1176378:-1
position: 1176378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1176459:-1
position: 1176459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1175960-1176113:-1:exon

position:1175960:-1
position: 1175960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1176113:-1
position: 1176113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1172241-1172360:-1:exon

position:1172241:-1
position: 1172241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1172360:-1
position: 1172360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1171530-1171605:-1:exon

position:1171530:-1
position: 1171530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1171605:-1
position: 1171605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1170835-1170896:-1:exon

position:1170835:-1
position: 1170835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1170896:-1
position: 1170896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1170593-1170671:-1:exon

position:1170593:-1
position: 1170593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1170671:-1
position: 1170671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1168391-1168510:-1:exon

position:1168391:-1
position: 1168391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1168510:-1
position: 1168510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1166845-1167737:-1:exon

position:1167737:-1
position: 1167737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

cdc23
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: cdc23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell division cycle protein 23 homolog
translation: MAAGAALSDVKRGLMAIGGLCRERGLTHSARWASELAFSLDPLPKDELPPVPPLTEEDLADLDAYTLAKSYFDLKEYDRAAYFLKGCQSQKAYFLYMYSRYLSGEKKKDDETVDSLGPLEKGQVKNESLRELRVELSKKHKARELDGFGLYLYGVVLRKLDLIKEAIDVFVEATHSLPLHWGAWLELCNLITDKEMLKPMVLPSTWMKEFFLAHIYTELQLIEEALQKYQNLIDAGFSKSTYIISQIAVAYHNVRDIDRALTLFNELRIQDPYRIENMDTLSNLLYVRNMKPELSYLAHNLCEIDKYRVETCCVIGNYYSLRSQHEKAALYFQRALKLNPRYLGAWTLMGHEYMEMKNISAAIQAYRHAIEVNKRDYRAWYGLGQTYEILKMPFYCLYYYRRAHQLRPNDSRMLIALGECYEKLSQLAEAKKCYWRAFSVGDVEKMALVKLAKIHEQMGESDQAAQCYIKYVQDICDCGEILEHHEMSTAFRALAQYYFKCKRWDESSVCAQKCCDYNDTREEGKALLRQISQLRNQGEASPTTVPAESRTFVPGVNTPSAKVPPLNLSSITP
SIO_010081: cdc23
subclass of: SO_0000673
so part of: cdc23
location: complement(join(1167573..1167737,1168391..1168510,1170593..1170671,1170835..1170896,1171530..1171605,1172241..1172360,1175960..1176113,1176378..1176459,1178374..1178471,1180420..1180597,1181182..1181314,1182464..1182569,1184688..1184730,1185619..1185756,1186121..1186193,1558972..1559066))
location: region:1167573-1559066:-1
so has part: feature:1558972-1559066:-1:exon
so has part: feature:1186121-1186193:-1:exon
so has part: feature:1185619-1185756:-1:exon
so has part: feature:1184688-1184730:-1:exon
so has part: feature:1182464-1182569:-1:exon
so has part: feature:1181182-1181314:-1:exon
so has part: feature:1180420-1180597:-1:exon
so has part: feature:1178374-1178471:-1:exon
so has part: feature:1176378-1176459:-1:exon
so has part: feature:1175960-1176113:-1:exon
so has part: feature:1172241-1172360:-1:exon
so has part: feature:1171530-1171605:-1:exon
so has part: feature:1170835-1170896:-1:exon
so has part: feature:1170593-1170671:-1:exon
so has part: feature:1168391-1168510:-1:exon
so has part: feature:1167573-1167737:-1:exon

XP_032885085.1
type: Protein
SIO_000068: ncbiprotein

position:1167573:-1
position: 1167573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1559066:-1
position: 1559066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1558972-1559066:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1186121-1186193:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1185619-1185756:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1184688-1184730:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1182464-1182569:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1181182-1181314:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1180420-1180597:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1178374-1178471:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1176378-1176459:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1175960-1176113:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1172241-1172360:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1171530-1171605:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1170835-1170896:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1170593-1170671:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1168391-1168510:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1167573-1167737:-1:exon

LOC116978213
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116978213
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1568388..1642404)
location: region:1568388-1642404:-1
so has part: feature:1568388-1642404:-1:exon
subclass of: SO_0000010

116978213
type: Gene
SIO_000068: ncbigene

position:1568388:-1
position: 1568388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1642404:-1
position: 1642404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1568388-1642404:-1:exon

LOC116978213
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116978213
product: glycine receptor subunit alpha-1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033029195.1
SIO_010081: LOC116978213
subclass of: SO_0000673
so part of: LOC116978213
location: complement(join(1568388..1570512,1583566..1583780,1587126..1587263,1588354..1588436,1592739..1592962,1608777..1608844,1640469..1640596,1642230..1642404))
location: region:1568388-1642404:-1
so has part: feature:1642230-1642404:-1:exon
so has part: feature:1640469-1640596:-1:exon
so has part: feature:1608777-1608844:-1:exon
so has part: feature:1592739-1592962:-1:exon
so has part: feature:1588354-1588436:-1:exon
so has part: feature:1587126-1587263:-1:exon
so has part: feature:1583566-1583780:-1:exon
so has part: feature:1568388-1570512:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1642230-1642404:-1:exon

position:1642230:-1
position: 1642230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1640469-1640596:-1:exon

position:1640469:-1
position: 1640469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1640596:-1
position: 1640596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1608777-1608844:-1:exon

position:1608777:-1
position: 1608777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1608844:-1
position: 1608844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1592739-1592962:-1:exon

position:1592739:-1
position: 1592739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1592962:-1
position: 1592962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1588354-1588436:-1:exon

position:1588354:-1
position: 1588354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1588436:-1
position: 1588436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1587126-1587263:-1:exon

position:1587126:-1
position: 1587126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1587263:-1
position: 1587263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1583566-1583780:-1:exon

position:1583566:-1
position: 1583566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1583780:-1
position: 1583780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1568388-1570512:-1:exon

position:1570512:-1
position: 1570512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116978213
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116978213
product: glycine receptor subunit alpha-1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033029196.1
SIO_010081: LOC116978213
subclass of: SO_0000673
so part of: LOC116978213
location: complement(join(1568388..1570535,1576458..1576605,1583566..1583780,1587126..1587263,1588354..1588436,1592739..1592962,1608777..1608844,1640469..1640596,1642230..1642404))
location: region:1568388-1642404:-1
so has part: feature:1642230-1642404:-1:exon
so has part: feature:1640469-1640596:-1:exon
so has part: feature:1608777-1608844:-1:exon
so has part: feature:1592739-1592962:-1:exon
so has part: feature:1588354-1588436:-1:exon
so has part: feature:1587126-1587263:-1:exon
so has part: feature:1583566-1583780:-1:exon
so has part: feature:1576458-1576605:-1:exon
so has part: feature:1568388-1570535:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1642230-1642404:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1640469-1640596:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1608777-1608844:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1592739-1592962:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1588354-1588436:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1587126-1587263:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1583566-1583780:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1576458-1576605:-1:exon

position:1576458:-1
position: 1576458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1576605:-1
position: 1576605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1568388-1570535:-1:exon

position:1570535:-1
position: 1570535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116978213
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116978213
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycine receptor subunit alphaZ1 isoform X1
translation: MHLPVTLRVYLWETVVFYSLAAAEEVGATRSATNPPSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRLNIFLRQQWNDPRLAYREFPDNSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRIFKTGNVLYSIRLTLSLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWDLSAAVQVADGLTLPQFLLKEEKDLRHCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKENEVVEGRFSFTAYGMGPACLQAKDGVAIKGNNSTSKSNSPPAKSSDEMRKLFLHRAKRIDTVSRVAFPLVFLIFNIFYWVIYKIVRREDIHHD
SIO_010081: LOC116978213
subclass of: SO_0000673
so part of: LOC116978213
location: complement(join(1570228..1570512,1583566..1583780,1587126..1587263,1588354..1588436,1592739..1592962,1608777..1608844,1640469..1640596,1642230..1642285))
location: region:1570228-1642285:-1
so has part: feature:1642230-1642285:-1:exon
so has part: feature:1640469-1640596:-1:exon
so has part: feature:1608777-1608844:-1:exon
so has part: feature:1592739-1592962:-1:exon
so has part: feature:1588354-1588436:-1:exon
so has part: feature:1587126-1587263:-1:exon
so has part: feature:1583566-1583780:-1:exon
so has part: feature:1570228-1570512:-1:exon

XP_032885086.1
type: Protein
SIO_000068: ncbiprotein

position:1570228:-1
position: 1570228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1642285:-1
position: 1642285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1642230-1642285:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1640469-1640596:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1608777-1608844:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1592739-1592962:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1588354-1588436:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1587126-1587263:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1583566-1583780:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1570228-1570512:-1:exon

LOC116978213
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116978213
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycine receptor subunit alpha-1 isoform X2
translation: MHLPVTLRVYLWETVVFYSLAAAEEVGATRSATNPPSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRLNIFLRQQWNDPRLAYREFPDNSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRIFKTGNVLYSIRLTLSLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWDLSAAVQVADGLTLPQFLLKEEKDLRHCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKELLKFRRRRRHHKEPLCCVLQENEVVEGRFSFTAYGMGPACLQAKDGVAIKGNNSTSKSNSPPAKSSDEMRKLFLHRAKRIDTVSRVAFPLVFLIFNIFYWVIYKIVRREDIHHD
SIO_010081: LOC116978213
subclass of: SO_0000673
so part of: LOC116978213
location: complement(join(1570228..1570535,1576458..1576605,1583566..1583780,1587126..1587263,1588354..1588436,1592739..1592962,1608777..1608844,1640469..1640596,1642230..1642285))
location: region:1570228-1642285:-1
so has part: feature:1642230-1642285:-1:exon
so has part: feature:1640469-1640596:-1:exon
so has part: feature:1608777-1608844:-1:exon
so has part: feature:1592739-1592962:-1:exon
so has part: feature:1588354-1588436:-1:exon
so has part: feature:1587126-1587263:-1:exon
so has part: feature:1583566-1583780:-1:exon
so has part: feature:1576458-1576605:-1:exon
so has part: feature:1570228-1570535:-1:exon

XP_032885087.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1642230-1642285:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1640469-1640596:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1608777-1608844:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1592739-1592962:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1588354-1588436:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1587126-1587263:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1583566-1583780:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1576458-1576605:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1570228-1570535:-1:exon

hmgxb3
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: hmgxb3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1741022..1809557
location: region:1741022-1809557:1
so has part: feature:1741022-1809557:1:exon
subclass of: SO_0000010

116978214
type: Gene
SIO_000068: ncbigene

position:1741022:1
position: 1741022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1809557:1
position: 1809557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1741022-1809557:1:exon

hmgxb3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: hmgxb3
product: HMG-box containing 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_033029197.1
SIO_010081: hmgxb3
subclass of: SO_0000673
so part of: hmgxb3
location: join(1741022..1741170,1742271..1742445,1743268..1743885,1750902..1751048,1752242..1752301,1753616..1753995,1760264..1760394,1762098..1762199,1763761..1763879,1765282..1765386,1766798..1766950,1769191..1769489,1777817..1777944,1779330..1779461,1783562..1783746,1786482..1786701,1788779..1788912,1799540..1799659,1805936..1806145,1809026..1809557)
location: region:1741022-1809557:1
so has part: feature:1741022-1741170:1:exon
so has part: feature:1742271-1742445:1:exon
so has part: feature:1743268-1743885:1:exon
so has part: feature:1750902-1751048:1:exon
so has part: feature:1752242-1752301:1:exon
so has part: feature:1753616-1753995:1:exon
so has part: feature:1760264-1760394:1:exon
so has part: feature:1762098-1762199:1:exon
so has part: feature:1763761-1763879:1:exon
so has part: feature:1765282-1765386:1:exon
so has part: feature:1766798-1766950:1:exon
so has part: feature:1769191-1769489:1:exon
so has part: feature:1777817-1777944:1:exon
so has part: feature:1779330-1779461:1:exon
so has part: feature:1783562-1783746:1:exon
so has part: feature:1786482-1786701:1:exon
so has part: feature:1788779-1788912:1:exon
so has part: feature:1799540-1799659:1:exon
so has part: feature:1805936-1806145:1:exon
so has part: feature:1809026-1809557:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1741022-1741170:1:exon

position:1741170:1
position: 1741170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1742271-1742445:1:exon

position:1742271:1
position: 1742271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1742445:1
position: 1742445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1743268-1743885:1:exon

position:1743268:1
position: 1743268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1743885:1
position: 1743885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1750902-1751048:1:exon

position:1750902:1
position: 1750902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1751048:1
position: 1751048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1752242-1752301:1:exon

position:1752242:1
position: 1752242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1752301:1
position: 1752301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1753616-1753995:1:exon

position:1753616:1
position: 1753616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1753995:1
position: 1753995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1760264-1760394:1:exon

position:1760264:1
position: 1760264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1760394:1
position: 1760394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1762098-1762199:1:exon

position:1762098:1
position: 1762098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1762199:1
position: 1762199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1763761-1763879:1:exon

position:1763761:1
position: 1763761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1763879:1
position: 1763879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1765282-1765386:1:exon

position:1765282:1
position: 1765282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1765386:1
position: 1765386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1766798-1766950:1:exon

position:1766798:1
position: 1766798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1766950:1
position: 1766950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1769191-1769489:1:exon

position:1769191:1
position: 1769191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1769489:1
position: 1769489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1777817-1777944:1:exon

position:1777817:1
position: 1777817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1777944:1
position: 1777944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1779330-1779461:1:exon

position:1779330:1
position: 1779330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1779461:1
position: 1779461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1783562-1783746:1:exon

position:1783562:1
position: 1783562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1783746:1
position: 1783746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1786482-1786701:1:exon

position:1786482:1
position: 1786482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1786701:1
position: 1786701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1788779-1788912:1:exon

position:1788779:1
position: 1788779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1788912:1
position: 1788912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1799540-1799659:1:exon

position:1799540:1
position: 1799540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1799659:1
position: 1799659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1805936-1806145:1:exon

position:1805936:1
position: 1805936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1806145:1
position: 1806145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1809026-1809557:1:exon

position:1809026:1
position: 1809026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

hmgxb3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: hmgxb3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HMG domain-containing protein 3 isoform X1
translation: MDAPYDGAEITLVTEEIEGCYSYAKSFQPKKKKKWKDQSDDGTKKGKKPRPAYLLYYYDTHLKVQQDFPNLPRSEINKKISESWRRLSVAEKSIYLEKAKLEKEGIDPNDKLISASAAVPPADIPGFRKILPRSNYIIIPTSNLPGDRNGRQLAQSPTPRGGDGNSVWQTITHDSIQSLFTVSGTLADACHVENTEESIAIDGITDETTFVHTETMQEMLTQFSNSGDDKLAAELGGSKTSLELTHPYDSPCVVIEGTLISTSDNVPECVTSCSEQQAAETTPVIAVLSNPSKLAASLTSHCAVEQTIGISSKQSIFAQKTTYTRRGRGTCPHPNCLFTYVTRHKPPQCPSCGKWLGGKWIPKGKQPQVLNVHVECNQQKHSKERADVTVCTKDTVQSSLESSQAVTQLLNVASDHHRDEEQQSMRASWQQTMHLEPRDSGPPVATVQNAGMPHPLGLCNTPLTAEDRVVEARSEDGMKEVGAGNHQTTNENNATINNSHGVKTTRPASSVSRQELQARRRCKARGRVKSALPIGTGRSRPPRVILPATPSAAAAQSGVTYIRVVTVPVSQAETTESSAPSASNGSTVGSSCTKSLSSAPPSGLKPSTLKQLGHSVLHPNYADGDEQAELKVSAESGSPQASAVSVRTVCLTLPKTSKASAFDLGLATCRGKGRCKNPKCTYVYMNRYKPGICPDCGYDFTRDKQDIKPSKPIINNSLSLGLLSPEEGLTQASKDLQRQTTLLLLRRTVQIPENEAELHEIFSLIQELNSSRLVLSAVNETITLEHNSWPNYYEASATVCGLCESQLFKGGHNSSASPEECWLLTESQFQVVIVQTKVCMNPHCLALHNFTDINSGLFNIGNKLLVSLDLLFKIRNCIKLGEDPRAVTTLILDSVQKITEKTLSEEQLNQLRELVWSGYWAFESLTIRDYNDMICGICGIAAKLEVAQRNSANVLALKNVEFTWPDFLTSDEVNVEDFWSTMENEAIEQAVFPSSIPITKFDASIIAPFIPPLLRGPVVVNSEKDKNPQPLPVAGNPRMLVRLLQDDVFKPEELNSYSESELRNLLTLCSIPVHPDDSKEQLCSMLFALYADILDGSASKDQPPCDVTGGKVYKVCLHQVVCGSKYLVRRESARDHVDLLVSSHYWPPVYTTDIAPHVALNADVRYPDITAQMWERNQGCFSNPLDPPKHVSCPELLDQQYTMDITVSEGSIQHPITKSSVRRLVCHDADQSTEGDVMPRHHSIALCDELHPYRDILTTMAGSKVENVRQQAIIFENATYYYLYNRLVDFLTSRDIVNQQISEVLQSCQPGEVVIRDSLYRLGIAHLNTESETEELA
SIO_010081: hmgxb3
subclass of: SO_0000673
so part of: hmgxb3
location: join(1741022..1741170,1742271..1742445,1743268..1743885,1750902..1751048,1752242..1752301,1753616..1753995,1760264..1760394,1762098..1762199,1763761..1763879,1765282..1765386,1766798..1766950,1769191..1769489,1777817..1777944,1779330..1779461,1783562..1783746,1786482..1786701,1788779..1788912,1799540..1799659,1805936..1806145,1809026..1809472)
location: region:1741022-1809472:1
so has part: feature:1741022-1741170:1:exon
so has part: feature:1742271-1742445:1:exon
so has part: feature:1743268-1743885:1:exon
so has part: feature:1750902-1751048:1:exon
so has part: feature:1752242-1752301:1:exon
so has part: feature:1753616-1753995:1:exon
so has part: feature:1760264-1760394:1:exon
so has part: feature:1762098-1762199:1:exon
so has part: feature:1763761-1763879:1:exon
so has part: feature:1765282-1765386:1:exon
so has part: feature:1766798-1766950:1:exon
so has part: feature:1769191-1769489:1:exon
so has part: feature:1777817-1777944:1:exon
so has part: feature:1779330-1779461:1:exon
so has part: feature:1783562-1783746:1:exon
so has part: feature:1786482-1786701:1:exon
so has part: feature:1788779-1788912:1:exon
so has part: feature:1799540-1799659:1:exon
so has part: feature:1805936-1806145:1:exon
so has part: feature:1809026-1809472:1:exon

XP_032885088.1
type: Protein
SIO_000068: ncbiprotein

position:1809472:1
position: 1809472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1741022-1741170:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1742271-1742445:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1743268-1743885:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1750902-1751048:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1752242-1752301:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1753616-1753995:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1760264-1760394:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1762098-1762199:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1763761-1763879:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1765282-1765386:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1766798-1766950:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1769191-1769489:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1777817-1777944:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1779330-1779461:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1783562-1783746:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1786482-1786701:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1788779-1788912:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1799540-1799659:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1805936-1806145:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1809026-1809472:1:exon

hmgxb3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: hmgxb3
product: HMG-box containing 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033029198.1
SIO_010081: hmgxb3
subclass of: SO_0000673
so part of: hmgxb3
location: join(1741022..1741170,1742271..1742445,1743268..1743885,1750902..1751048,1752242..1752301,1753616..1753995,1760264..1760394,1762098..1762199,1763761..1763879,1765282..1765386,1766798..1766950,1769191..1769489,1777817..1777944,1779330..1779461,1783562..1783746,1786482..1786701,1788779..1788912,1795680..1796552)
location: region:1741022-1796552:1
so has part: feature:1741022-1741170:1:exon
so has part: feature:1742271-1742445:1:exon
so has part: feature:1743268-1743885:1:exon
so has part: feature:1750902-1751048:1:exon
so has part: feature:1752242-1752301:1:exon
so has part: feature:1753616-1753995:1:exon
so has part: feature:1760264-1760394:1:exon
so has part: feature:1762098-1762199:1:exon
so has part: feature:1763761-1763879:1:exon
so has part: feature:1765282-1765386:1:exon
so has part: feature:1766798-1766950:1:exon
so has part: feature:1769191-1769489:1:exon
so has part: feature:1777817-1777944:1:exon
so has part: feature:1779330-1779461:1:exon
so has part: feature:1783562-1783746:1:exon
so has part: feature:1786482-1786701:1:exon
so has part: feature:1788779-1788912:1:exon
so has part: feature:1795680-1796552:1:exon

position:1796552:1
position: 1796552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1741022-1741170:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1742271-1742445:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1743268-1743885:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1750902-1751048:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1752242-1752301:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1753616-1753995:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1760264-1760394:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1762098-1762199:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1763761-1763879:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1765282-1765386:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1766798-1766950:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1769191-1769489:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1777817-1777944:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1779330-1779461:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1783562-1783746:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1786482-1786701:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1788779-1788912:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1795680-1796552:1:exon

position:1795680:1
position: 1795680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

hmgxb3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: hmgxb3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HMG domain-containing protein 3 isoform X2
translation: MDAPYDGAEITLVTEEIEGCYSYAKSFQPKKKKKWKDQSDDGTKKGKKPRPAYLLYYYDTHLKVQQDFPNLPRSEINKKISESWRRLSVAEKSIYLEKAKLEKEGIDPNDKLISASAAVPPADIPGFRKILPRSNYIIIPTSNLPGDRNGRQLAQSPTPRGGDGNSVWQTITHDSIQSLFTVSGTLADACHVENTEESIAIDGITDETTFVHTETMQEMLTQFSNSGDDKLAAELGGSKTSLELTHPYDSPCVVIEGTLISTSDNVPECVTSCSEQQAAETTPVIAVLSNPSKLAASLTSHCAVEQTIGISSKQSIFAQKTTYTRRGRGTCPHPNCLFTYVTRHKPPQCPSCGKWLGGKWIPKGKQPQVLNVHVECNQQKHSKERADVTVCTKDTVQSSLESSQAVTQLLNVASDHHRDEEQQSMRASWQQTMHLEPRDSGPPVATVQNAGMPHPLGLCNTPLTAEDRVVEARSEDGMKEVGAGNHQTTNENNATINNSHGVKTTRPASSVSRQELQARRRCKARGRVKSALPIGTGRSRPPRVILPATPSAAAAQSGVTYIRVVTVPVSQAETTESSAPSASNGSTVGSSCTKSLSSAPPSGLKPSTLKQLGHSVLHPNYADGDEQAELKVSAESGSPQASAVSVRTVCLTLPKTSKASAFDLGLATCRGKGRCKNPKCTYVYMNRYKPGICPDCGYDFTRDKQDIKPSKPIINNSLSLGLLSPEEGLTQASKDLQRQTTLLLLRRTVQIPENEAELHEIFSLIQELNSSRLVLSAVNETITLEHNSWPNYYEASATVCGLCESQLFKGGHNSSASPEECWLLTESQFQVVIVQTKVCMNPHCLALHNFTDINSGLFNIGNKLLVSLDLLFKIRNCIKLGEDPRAVTTLILDSVQKITEKTLSEEQLNQLRELVWSGYWAFESLTIRDYNDMICGICGIAAKLEVAQRNSANVLALKNVEFTWPDFLTSDEVNVEDFWSTMENEAIEQAVFPSSIPITKFDASIIAPFIPPLLRGPVVVNSEKDKNPQPLPVAGNPRMLVRLLQDDVFKPEELNSYSESELRNLLTLCSIPVHPDDSKRLPDLQSSSRT
SIO_010081: hmgxb3
subclass of: SO_0000673
so part of: hmgxb3
location: join(1741022..1741170,1742271..1742445,1743268..1743885,1750902..1751048,1752242..1752301,1753616..1753995,1760264..1760394,1762098..1762199,1763761..1763879,1765282..1765386,1766798..1766950,1769191..1769489,1777817..1777944,1779330..1779461,1783562..1783746,1786482..1786701,1788779..1788912,1795680..1795715)
location: region:1741022-1795715:1
so has part: feature:1741022-1741170:1:exon
so has part: feature:1742271-1742445:1:exon
so has part: feature:1743268-1743885:1:exon
so has part: feature:1750902-1751048:1:exon
so has part: feature:1752242-1752301:1:exon
so has part: feature:1753616-1753995:1:exon
so has part: feature:1760264-1760394:1:exon
so has part: feature:1762098-1762199:1:exon
so has part: feature:1763761-1763879:1:exon
so has part: feature:1765282-1765386:1:exon
so has part: feature:1766798-1766950:1:exon
so has part: feature:1769191-1769489:1:exon
so has part: feature:1777817-1777944:1:exon
so has part: feature:1779330-1779461:1:exon
so has part: feature:1783562-1783746:1:exon
so has part: feature:1786482-1786701:1:exon
so has part: feature:1788779-1788912:1:exon
so has part: feature:1795680-1795715:1:exon

XP_032885089.1
type: Protein
SIO_000068: ncbiprotein

position:1795715:1
position: 1795715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1741022-1741170:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1742271-1742445:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1743268-1743885:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1750902-1751048:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1752242-1752301:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1753616-1753995:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1760264-1760394:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1762098-1762199:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1763761-1763879:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1765282-1765386:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1766798-1766950:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1769191-1769489:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1777817-1777944:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1779330-1779461:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1783562-1783746:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1786482-1786701:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1788779-1788912:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1795680-1795715:1:exon

LOC116978215
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116978215
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1815778..1858696)
location: region:1815778-1858696:-1
so has part: feature:1815778-1858696:-1:exon
subclass of: SO_0000010

116978215
type: Gene
SIO_000068: ncbigene

position:1815778:-1
position: 1815778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1858696:-1
position: 1858696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1815778-1858696:-1:exon

LOC116978215
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116978215
product: vascular endothelial growth factor C-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033029202.1
SIO_010081: LOC116978215
subclass of: SO_0000673
so part of: LOC116978215
location: complement(join(1815778..1817020,1818204..1818540,1819255..1819367,1821747..1821871,1823869..1824059,1828913..1829138,1858404..1858696))
location: region:1815778-1858696:-1
so has part: feature:1858404-1858696:-1:exon
so has part: feature:1828913-1829138:-1:exon
so has part: feature:1823869-1824059:-1:exon
so has part: feature:1821747-1821871:-1:exon
so has part: feature:1819255-1819367:-1:exon
so has part: feature:1818204-1818540:-1:exon
so has part: feature:1815778-1817020:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1858404-1858696:-1:exon

position:1858404:-1
position: 1858404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1828913-1829138:-1:exon

position:1828913:-1
position: 1828913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1829138:-1
position: 1829138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1823869-1824059:-1:exon

position:1823869:-1
position: 1823869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1824059:-1
position: 1824059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1821747-1821871:-1:exon

position:1821747:-1
position: 1821747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1821871:-1
position: 1821871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1819255-1819367:-1:exon

position:1819255:-1
position: 1819255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1819367:-1
position: 1819367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1818204-1818540:-1:exon

position:1818204:-1
position: 1818204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1818540:-1
position: 1818540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1815778-1817020:-1:exon

position:1817020:-1
position: 1817020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116978215
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116978215
product: vascular endothelial growth factor C-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_033029201.1
SIO_010081: LOC116978215
subclass of: SO_0000673
so part of: LOC116978215
location: complement(join(1815778..1817020,1818204..1818540,1819255..1819367,1821747..1821895,1823881..1824059,1828913..1829138,1858404..1858695))
location: region:1815778-1858695:-1
so has part: feature:1858404-1858695:-1:exon
so has part: feature:1828913-1829138:-1:exon
so has part: feature:1823881-1824059:-1:exon
so has part: feature:1821747-1821895:-1:exon
so has part: feature:1819255-1819367:-1:exon
so has part: feature:1818204-1818540:-1:exon
so has part: feature:1815778-1817020:-1:exon

position:1858695:-1
position: 1858695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1858404-1858695:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1828913-1829138:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1823881-1824059:-1:exon

position:1823881:-1
position: 1823881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1821747-1821895:-1:exon

position:1821895:-1
position: 1821895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1819255-1819367:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1818204-1818540:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1815778-1817020:-1:exon

LOC116978215
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116978215
product: vascular endothelial growth factor C-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_033029200.1
SIO_010081: LOC116978215
subclass of: SO_0000673
so part of: LOC116978215
location: complement(join(1815778..1817020,1818204..1818540,1819255..1819367,1821747..1821895,1823869..1824059,1828913..1829138,1858404..1858694))
location: region:1815778-1858694:-1
so has part: feature:1858404-1858694:-1:exon
so has part: feature:1828913-1829138:-1:exon
so has part: feature:1823869-1824059:-1:exon
so has part: feature:1821747-1821895:-1:exon
so has part: feature:1819255-1819367:-1:exon
so has part: feature:1818204-1818540:-1:exon
so has part: feature:1815778-1817020:-1:exon

position:1858694:-1
position: 1858694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1858404-1858694:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1828913-1829138:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1823869-1824059:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1821747-1821895:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1819255-1819367:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1818204-1818540:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1815778-1817020:-1:exon

LOC116978215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116978215
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vascular endothelial growth factor C-like isoform X2
translation: MRPGQQRLADPLCQRSPPGYCPILSLSLILLSLLTLSAAHQPDHPGHPHRRDQAHSQGQATSQLEQQLRSAANIIELMDIFYPEYRRIQECLQRRSTMAKHARREAEEEQEEEEEWTEAAAFTVLWREEDLRNIELEWERTQCKPREVCLDLGRELGTATNKFYKPPCVSVHRCGGCCNNEGFQCINVSTAFLMEITIPQVGLSRPVVISFINHTACGCHPRHIFSQSHSIIRRSFHVSPTSCVMGNETCPHGHRWDPHHCRCVSVHEVSTPPTSTAEPDVTEGEFDDFCGPYMVFDEDSCNCVCTNWPSSCHHSKEFDENTCRCVCVNRQHRGLCREEEQEEWDDDACQCVCRKSCPRHLPLNTNTCTCECSESPESCFRRGKKFDPYTCRCYRLPCRSQVRQCQPGLYFSHFVCSCLPLYMKEYQTED
SIO_010081: LOC116978215
subclass of: SO_0000673
so part of: LOC116978215
location: complement(join(1816903..1817020,1818204..1818540,1819255..1819367,1821747..1821895,1823881..1824059,1828913..1829138,1858404..1858574))
location: region:1816903-1858574:-1
so has part: feature:1858404-1858574:-1:exon
so has part: feature:1828913-1829138:-1:exon
so has part: feature:1823881-1824059:-1:exon
so has part: feature:1821747-1821895:-1:exon
so has part: feature:1819255-1819367:-1:exon
so has part: feature:1818204-1818540:-1:exon
so has part: feature:1816903-1817020:-1:exon

XP_032885092.1
type: Protein
SIO_000068: ncbiprotein

position:1816903:-1
position: 1816903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1858574:-1
position: 1858574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1858404-1858574:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1828913-1829138:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1823881-1824059:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1821747-1821895:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1819255-1819367:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1818204-1818540:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1816903-1817020:-1:exon

LOC116978215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116978215
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vascular endothelial growth factor C-like isoform X3
translation: MRPGQQRLADPLCQRSPPGYCPILSLSLILLSLLTLSAAHQPDHPGHPHRRDQAHSQGQATSQLEQQLRSAANIIELMDIFYPEYRRIQECLQRRSTMAKHARREAEEEQEEEEEWTEAAAFTVLWREEDLRNIELEWERTQCKPREVCLDLGRELGTATNKFYKPPCVSVHRCGGCCNNEGFQCINVSTAFVSKTVGLSRPVVISFINHTACGCHPRHIFSQSHSIIRRSFHVSPTSCVMGNETCPHGHRWDPHHCRCVSVHEVSTPPTSTAEPDVTEGEFDDFCGPYMVFDEDSCNCVCTNWPSSCHHSKEFDENTCRCVCVNRQHRGLCREEEQEEWDDDACQCVCRKSCPRHLPLNTNTCTCECSESPESCFRRGKKFDPYTCRCYRLPCRSQVRQCQPGLYFSHFVCSCLPLYMKEYQTED
SIO_010081: LOC116978215
subclass of: SO_0000673
so part of: LOC116978215
location: complement(join(1816903..1817020,1818204..1818540,1819255..1819367,1821747..1821871,1823869..1824059,1828913..1829138,1858404..1858574))
location: region:1816903-1858574:-1
so has part: feature:1858404-1858574:-1:exon
so has part: feature:1828913-1829138:-1:exon
so has part: feature:1823869-1824059:-1:exon
so has part: feature:1821747-1821871:-1:exon
so has part: feature:1819255-1819367:-1:exon
so has part: feature:1818204-1818540:-1:exon
so has part: feature:1816903-1817020:-1:exon

XP_032885093.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1858404-1858574:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1828913-1829138:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1823869-1824059:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1821747-1821871:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1819255-1819367:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1818204-1818540:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1816903-1817020:-1:exon

LOC116978215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116978215
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vascular endothelial growth factor C-like isoform X1
translation: MRPGQQRLADPLCQRSPPGYCPILSLSLILLSLLTLSAAHQPDHPGHPHRRDQAHSQGQATSQLEQQLRSAANIIELMDIFYPEYRRIQECLQRRSTMAKHARREAEEEQEEEEEWTEAAAFTVLWREEDLRNIELEWERTQCKPREVCLDLGRELGTATNKFYKPPCVSVHRCGGCCNNEGFQCINVSTAFVSKTLMEITIPQVGLSRPVVISFINHTACGCHPRHIFSQSHSIIRRSFHVSPTSCVMGNETCPHGHRWDPHHCRCVSVHEVSTPPTSTAEPDVTEGEFDDFCGPYMVFDEDSCNCVCTNWPSSCHHSKEFDENTCRCVCVNRQHRGLCREEEQEEWDDDACQCVCRKSCPRHLPLNTNTCTCECSESPESCFRRGKKFDPYTCRCYRLPCRSQVRQCQPGLYFSHFVCSCLPLYMKEYQTED
SIO_010081: LOC116978215
subclass of: SO_0000673
so part of: LOC116978215
location: complement(join(1816903..1817020,1818204..1818540,1819255..1819367,1821747..1821895,1823869..1824059,1828913..1829138,1858404..1858574))
location: region:1816903-1858574:-1
so has part: feature:1858404-1858574:-1:exon
so has part: feature:1828913-1829138:-1:exon
so has part: feature:1823869-1824059:-1:exon
so has part: feature:1821747-1821895:-1:exon
so has part: feature:1819255-1819367:-1:exon
so has part: feature:1818204-1818540:-1:exon
so has part: feature:1816903-1817020:-1:exon

XP_032885091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1858404-1858574:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1828913-1829138:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1823869-1824059:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1821747-1821895:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1819255-1819367:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1818204-1818540:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1816903-1817020:-1:exon

LOC116978731
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116978731
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2225893..2238789
location: region:2225893-2238789:1
so has part: feature:2225893-2238789:1:exon
subclass of: SO_0000011

116978731
type: Gene
SIO_000068: ncbigene

position:2225893:1
position: 2225893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2238789:1
position: 2238789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2225893-2238789:1:exon

LOC116978731
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116978731
product: uncharacterized LOC116978731
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004413526.1
SIO_010081: LOC116978731
subclass of: SO_0000673
so part of: LOC116978731
location: join(2225893..2225903,2226236..2226241,2238639..2238789)
location: region:2225893-2238789:1
so has part: feature:2225893-2225903:1:exon
so has part: feature:2226236-2226241:1:exon
so has part: feature:2238639-2238789:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2225893-2225903:1:exon

position:2225903:1
position: 2225903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2226236-2226241:1:exon

position:2226236:1
position: 2226236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2226241:1
position: 2226241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2238639-2238789:1:exon

position:2238639:1
position: 2238639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116978732
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116978732
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2449917..2470145
location: region:2449917-2470145:1
so has part: feature:2449917-2470145:1:exon
subclass of: SO_0000011

116978732
type: Gene
SIO_000068: ncbigene

position:2449917:1
position: 2449917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2470145:1
position: 2470145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2449917-2470145:1:exon

LOC116978732
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116978732
product: uncharacterized LOC116978732
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004413527.1
SIO_010081: LOC116978732
subclass of: SO_0000673
so part of: LOC116978732
location: join(2449917..2450011,2469434..2469438,2470134..2470145)
location: region:2449917-2470145:1
so has part: feature:2449917-2450011:1:exon
so has part: feature:2469434-2469438:1:exon
so has part: feature:2470134-2470145:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2449917-2450011:1:exon

position:2450011:1
position: 2450011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2469434-2469438:1:exon

position:2469434:1
position: 2469434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2469438:1
position: 2469438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2470134-2470145:1:exon

position:2470134:1
position: 2470134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116978733
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116978733
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2853688..2865189)
location: region:2853688-2865189:-1
so has part: feature:2853688-2865189:-1:exon
subclass of: SO_0000011

116978733
type: Gene
SIO_000068: ncbigene

position:2853688:-1
position: 2853688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2865189:-1
position: 2865189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2853688-2865189:-1:exon

LOC116978733
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116978733
product: uncharacterized LOC116978733
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_004413528.1
SIO_010081: LOC116978733
subclass of: SO_0000673
so part of: LOC116978733
location: complement(join(2853688..2853771,2861292..2861293,2865178..2865189))
location: region:2853688-2865189:-1
so has part: feature:2865178-2865189:-1:exon
so has part: feature:2861292-2861293:-1:exon
so has part: feature:2853688-2853771:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2865178-2865189:-1:exon

position:2865178:-1
position: 2865178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2861292-2861293:-1:exon

position:2861292:-1
position: 2861292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2861293:-1
position: 2861293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2853688-2853771:-1:exon

position:2853771:-1
position: 2853771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

tenm2
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: tenm2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3161873..4421840
location: region:3161873-4421840:1
so has part: feature:3161873-4421840:1:exon
subclass of: SO_0000010

116978216
type: Gene
SIO_000068: ncbigene

position:3161873:1
position: 3161873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4421840:1
position: 4421840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3161873-4421840:1:exon

tenm2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tenm2
product: teneurin transmembrane protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033029203.1
SIO_010081: tenm2
subclass of: SO_0000673
so part of: tenm2
location: join(3161873..3161949,3484746..3484833,3656571..3656855,3711829..3712098,4084244..4084456,4142493..4142727,4187251..4187489,4228149..4228265,4256032..4256237,4268642..4268837,4286410..4286511,4299136..4299330,4316122..4316322,4317667..4317852,4326586..4326732,4336656..4336872,4342352..4342471,4345180..4345441,4346894..4347161,4365496..4365639,4366645..4366894,4376567..4376587,4383977..4384209,4388591..4388745,4391025..4391899,4394897..4395072,4397356..4397591,4401983..4402279,4410328..4411942,4416732..4416862,4420132..4420437,4420657..4421840)
location: region:3161873-4421840:1
so has part: feature:3161873-3161949:1:exon
so has part: feature:3484746-3484833:1:exon
so has part: feature:3656571-3656855:1:exon
so has part: feature:3711829-3712098:1:exon
so has part: feature:4084244-4084456:1:exon
so has part: feature:4142493-4142727:1:exon
so has part: feature:4187251-4187489:1:exon
so has part: feature:4228149-4228265:1:exon
so has part: feature:4256032-4256237:1:exon
so has part: feature:4268642-4268837:1:exon
so has part: feature:4286410-4286511:1:exon
so has part: feature:4299136-4299330:1:exon
so has part: feature:4316122-4316322:1:exon
so has part: feature:4317667-4317852:1:exon
so has part: feature:4326586-4326732:1:exon
so has part: feature:4336656-4336872:1:exon
so has part: feature:4342352-4342471:1:exon
so has part: feature:4345180-4345441:1:exon
so has part: feature:4346894-4347161:1:exon
so has part: feature:4365496-4365639:1:exon
so has part: feature:4366645-4366894:1:exon
so has part: feature:4376567-4376587:1:exon
so has part: feature:4383977-4384209:1:exon
so has part: feature:4388591-4388745:1:exon
so has part: feature:4391025-4391899:1:exon
so has part: feature:4394897-4395072:1:exon
so has part: feature:4397356-4397591:1:exon
so has part: feature:4401983-4402279:1:exon
so has part: feature:4410328-4411942:1:exon
so has part: feature:4416732-4416862:1:exon
so has part: feature:4420132-4420437:1:exon
so has part: feature:4420657-4421840:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3161873-3161949:1:exon

position:3161949:1
position: 3161949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3484746-3484833:1:exon

position:3484746:1
position: 3484746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3484833:1
position: 3484833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3656571-3656855:1:exon

position:3656571:1
position: 3656571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3656855:1
position: 3656855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3711829-3712098:1:exon

position:3711829:1
position: 3711829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3712098:1
position: 3712098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4084244-4084456:1:exon

position:4084244:1
position: 4084244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4084456:1
position: 4084456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4142493-4142727:1:exon

position:4142493:1
position: 4142493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4142727:1
position: 4142727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4187251-4187489:1:exon

position:4187251:1
position: 4187251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4187489:1
position: 4187489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4228149-4228265:1:exon

position:4228149:1
position: 4228149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4228265:1
position: 4228265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4256032-4256237:1:exon

position:4256032:1
position: 4256032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4256237:1
position: 4256237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4268642-4268837:1:exon

position:4268642:1
position: 4268642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4268837:1
position: 4268837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4286410-4286511:1:exon

position:4286410:1
position: 4286410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4286511:1
position: 4286511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4299136-4299330:1:exon

position:4299136:1
position: 4299136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4299330:1
position: 4299330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4316122-4316322:1:exon

position:4316122:1
position: 4316122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4316322:1
position: 4316322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4317667-4317852:1:exon

position:4317667:1
position: 4317667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4317852:1
position: 4317852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4326586-4326732:1:exon

position:4326586:1
position: 4326586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4326732:1
position: 4326732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4336656-4336872:1:exon

position:4336656:1
position: 4336656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4336872:1
position: 4336872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4342352-4342471:1:exon

position:4342352:1
position: 4342352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4342471:1
position: 4342471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4345180-4345441:1:exon

position:4345180:1
position: 4345180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4345441:1
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urn:…
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urn:…
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urn:…
SIO_000300: 22
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urn:…
SIO_000300: 23
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urn:…
SIO_000300: 24
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urn:…
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urn:…
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urn:…
SIO_000300: 29
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urn:…
SIO_000300: 30
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SIO_000300: 32
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reference: sequence
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tenm2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tenm2
product: teneurin transmembrane protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033029204.1
SIO_010081: tenm2
subclass of: SO_0000673
so part of: tenm2
location: join(3161873..3161949,3484746..3484833,3656571..3656855,3711829..3712098,4084244..4084456,4142493..4142727,4187251..4187489,4228149..4228265,4256032..4256237,4268642..4268837,4286410..4286511,4299136..4299330,4316122..4316322,4317667..4317852,4326586..4326732,4336656..4336872,4342352..4342471,4345180..4345441,4346894..4347161,4365496..4365639,4366645..4366894,4376567..4376587,4383977..4384209,4388591..4388736,4391025..4391899,4394897..4395072,4397356..4397591,4401983..4402279,4410328..4411942,4416732..4416862,4420132..4420437,4420657..4421840)
location: region:3161873-4421840:1
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SIO_000628: feature:4336656-4336872:1:exon

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SIO_000628: feature:4342352-4342471:1:exon

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SIO_000628: feature:4345180-4345441:1:exon

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SIO_000628: feature:4346894-4347161:1:exon

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SIO_000300: 20
SIO_000628: feature:4365496-4365639:1:exon

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SIO_000300: 21
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SIO_000628: feature:4376567-4376587:1:exon

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SIO_000300: 23
SIO_000628: feature:4383977-4384209:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4388591-4388736:1:exon

position:4388736:1
position: 4388736
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 25
SIO_000628: feature:4391025-4391899:1:exon

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SIO_000300: 26
SIO_000628: feature:4394897-4395072:1:exon

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SIO_000300: 30
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SIO_000300: 31
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urn:…
SIO_000300: 32
SIO_000628: feature:4420657-4421840:1:exon

tenm2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tenm2
product: teneurin transmembrane protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033029205.1
SIO_010081: tenm2
subclass of: SO_0000673
so part of: tenm2
location: join(3161873..3161949,3484746..3484833,3656571..3656855,3711829..3712098,4084244..4084456,4142493..4142727,4187251..4187489,4228149..4228265,4256032..4256237,4268642..4268837,4286410..4286511,4299136..4299330,4316122..4316322,4317667..4317852,4326586..4326732,4336656..4336872,4342352..4342471,4345180..4345441,4346894..4347161,4365496..4365639,4366645..4366894,4383977..4384209,4388591..4388745,4391025..4391899,4394897..4395072,4397356..4397591,4401983..4402279,4410328..4411942,4416732..4416862,4420132..4420437,4420657..4421840)
location: region:3161873-4421840:1
so has part: feature:3161873-3161949:1:exon
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urn:…
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SIO_000628: feature:4420132-4420437:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4420657-4421840:1:exon

tenm2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tenm2
product: teneurin transmembrane protein 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033029206.1
SIO_010081: tenm2
subclass of: SO_0000673
so part of: tenm2
location: join(3161873..3161949,3484746..3484833,3656571..3656855,3711829..3712098,4084244..4084456,4142493..4142727,4187251..4187489,4256032..4256237,4268642..4268837,4286410..4286511,4299136..4299330,4316122..4316322,4317667..4317852,4326586..4326732,4336656..4336872,4342352..4342471,4345180..4345441,4346894..4347161,4365496..4365639,4366645..4366894,4376567..4376587,4383977..4384209,4388591..4388745,4391025..4391899,4394897..4395072,4397356..4397591,4401983..4402279,4410328..4411942,4416732..4416862,4420132..4420437,4420657..4421840)
location: region:3161873-4421840:1
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 30
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urn:…
SIO_000300: 31
SIO_000628: feature:4420657-4421840:1:exon

tenm2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tenm2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: teneurin-2 isoform X1
translation: MDVKDRRHRSLTRGRCAKDCRYTSSSLDSEECRVPTQKSYSSSETLKAYDHDARLHYGTRVTELVHREADEFSRQGANFTLTELGICEPSPHHSTAYGPDMGLLHRGYSLSDADSDTEGAISPEHAIRLWGRGIKSRRGSGLSSRENSALTLTDSENEKESEEEEGRPTTHSSSPSHPFAQQTSAHLSSSSVKDYQMPLLDSSISHPALESNVNEEFAINSYLLRAGSGALQPSSNGPPNHHSQSTLRPPLPPPHNHTLSHHHSSANSLNRNSLTNRRNQIHAPSMAPNDLPTTPESVQLQDSWVLNSNVPLETRHFLFKTSSGTTPLFSTSSPGYPLTSGTVYSPPPRLLPRSTFSRNAFKLKKPSKYCSWKCAALCSIAASITLAILLAYFIAMHLLDLNWHLQPTDGQIFRNGVGTGDASDVTIAPSAGRGTVAIKNSSIDLGDVDIGRRVSQEVPPAVFWRSQLYIERPQFVKFNVSLGKEALFGLYIRKGFHPSHTQYDFMERLDGKEKWSVVETPRERRSIQTLVINEAVFVQYLDAGTWHLAFYNDGKEKELISFNTVVLDSVQECPHNCHGNGECVSGVCHCFAGFHGADCSKAACPVLCSGNGQYAKGNCMCYSSWKGAECDVPMGQCIDPACSGRGTCTSGACVCSARFKGENCEEVDCLDPTCSSHGVCAHGDCHCNPGWGGLNCEIPRAQCPDQCTGHGTYIPETGLCRCDPDWIGPDCSVEVCSVDCGTHGVCISGICRCEEGWTGLACDQRVCHPRCAEHGSCKDGKCECREGWNGEHCTIDGCPDQCNSNGRCTLSQSSWHCICQTGWRGIGCNVAMETSCTDGKDNEGDGLVDCLDPDCCLQSSCQSNPLCHGSHDPLDIIQQNQWALPTQVVKSFYDRIKLLVGKDRTHIIPGANPFNESLASLIRGQVFTKDGTPLVGVNVSFVKYPQYGYTITRQDGMFDLIANGGASLTLHFERAPFLSQERTVWLPWNTFYAMNTLVMKTEENTIPSCDLSGFVRPEPILVSSPLSTFFSSTPGQNPIIPETQVLHEAVDIPGSNMKLCYLSSRTAGYKSLLKVTMTQSIVPINLIKVHLMVAVEGHLFQKWLHSSPNLAYTYIWDKTDAYSQKVYGLSEAVVSVGYEYESCPNLILWEKRTALLQGYELDPSNLGGWSLDKHHALNIKSGVLHKGNGENQFLSQQPAVISSIMGNGRRRSISCPSCNGLADGNKLLAPVALAVGVDGSLYIGDFNFIRRIFPARNVTSILELRNKDFRHSNNPAHKYFMAVDPVTGALYVSDTNSRQIIRVKSLDGARDLASNAEVVAGTGEQCLPFDEARCGDGGKAVDATLMSPRGIAVDKNGLMYFVDATMIRKVDQNGIISTLLGSNDLTAIRPLSCDSSMDVSQVRLEWPTNLAINPIDNSLYVLENNVILRITENHQVSIIAGRPMHCQVPGIDYSLSKLAIHSALESASAIAVSHTGVLYIAETDEKKINRVRQVTTNGEISLLAGMPSDCDCKNDVNCDCFLGDAGYATDAKLNSPSSLAVSPDGTVFIADLGNVRIRAVNRNKPQANSMGLYEVASAAEQELYIFNSDGVHQYTMSLITGDYIYNLSYSPAGDLAELTDNNGNTLKIRRDSNGVPRHLLMADNQVCSLTMDANGGLKMVSAQNQELVVFTYNGNSGLLATKTDDIGWTTFFDYDSEGRLTNLTHPTGVVTSLHREMERSINIDIETSNREDDVTVTTNLSSVDASYTLVQDQVRNSYQLCNNGSLRVMYANGMGVSFYTEPHILAGTISPTVGRRNITLPVENGLNSIEWRLRKEQVKGKVTVFGRKLRVHGRNLLSIDFDRNSRTEKIYDDHRKFTLRIIYDSLGRPAIWLPSSGLAAVNVSYSPSGKVVGVQRGTMSERNKYDDLGRIVSRVFSDGKVWSYAYLDKSMVLLLQSQRQYIFEFDQTDRLQAVTMPSVARHTMSTHNSIGYIRNIYHPPESNASMVFDFTTEGRILKSA…
SIO_010081: tenm2
subclass of: SO_0000673
so part of: tenm2
location: join(3656630..3656855,3711829..3712098,4084244..4084456,4142493..4142727,4187251..4187489,4228149..4228265,4256032..4256237,4268642..4268837,4286410..4286511,4299136..4299330,4316122..4316322,4317667..4317852,4326586..4326732,4336656..4336872,4342352..4342471,4345180..4345441,4346894..4347161,4365496..4365639,4366645..4366894,4376567..4376587,4383977..4384209,4388591..4388745,4391025..4391899,4394897..4395072,4397356..4397591,4401983..4402279,4410328..4411942,4416732..4416862,4420132..4420437,4420657..4421112)
location: region:3656630-4421112:1
so has part: feature:3656630-3656855:1:exon
so has part: feature:3711829-3712098:1:exon
so has part: feature:4084244-4084456:1:exon
so has part: feature:4142493-4142727:1:exon
so has part: feature:4187251-4187489:1:exon
so has part: feature:4228149-4228265:1:exon
so has part: feature:4256032-4256237:1:exon
so has part: feature:4268642-4268837:1:exon
so has part: feature:4286410-4286511:1:exon
so has part: feature:4299136-4299330:1:exon
so has part: feature:4316122-4316322:1:exon
so has part: feature:4317667-4317852:1:exon
so has part: feature:4326586-4326732:1:exon
so has part: feature:4336656-4336872:1:exon
so has part: feature:4342352-4342471:1:exon
so has part: feature:4345180-4345441:1:exon
so has part: feature:4346894-4347161:1:exon
so has part: feature:4365496-4365639:1:exon
so has part: feature:4366645-4366894:1:exon
so has part: feature:4376567-4376587:1:exon
so has part: feature:4383977-4384209:1:exon
so has part: feature:4388591-4388745:1:exon
so has part: feature:4391025-4391899:1:exon
so has part: feature:4394897-4395072:1:exon
so has part: feature:4397356-4397591:1:exon
so has part: feature:4401983-4402279:1:exon
so has part: feature:4410328-4411942:1:exon
so has part: feature:4416732-4416862:1:exon
so has part: feature:4420132-4420437:1:exon
so has part: feature:4420657-4421112:1:exon

XP_032885094.1
type: Protein
SIO_000068: ncbiprotein

position:3656630:1
position: 3656630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4421112:1
position: 4421112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3656630-3656855:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3711829-3712098:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4084244-4084456:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4142493-4142727:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4187251-4187489:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4228149-4228265:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4256032-4256237:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4268642-4268837:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4286410-4286511:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4299136-4299330:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4316122-4316322:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4317667-4317852:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4326586-4326732:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4336656-4336872:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4342352-4342471:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4345180-4345441:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4346894-4347161:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4365496-4365639:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4366645-4366894:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4376567-4376587:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4383977-4384209:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4388591-4388745:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4391025-4391899:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4394897-4395072:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4397356-4397591:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4401983-4402279:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4410328-4411942:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4416732-4416862:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4420132-4420437:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4420657-4421112:1:exon

tenm2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tenm2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: teneurin-2 isoform X2
translation: MDVKDRRHRSLTRGRCAKDCRYTSSSLDSEECRVPTQKSYSSSETLKAYDHDARLHYGTRVTELVHREADEFSRQGANFTLTELGICEPSPHHSTAYGPDMGLLHRGYSLSDADSDTEGAISPEHAIRLWGRGIKSRRGSGLSSRENSALTLTDSENEKESEEEEGRPTTHSSSPSHPFAQQTSAHLSSSSVKDYQMPLLDSSISHPALESNVNEEFAINSYLLRAGSGALQPSSNGPPNHHSQSTLRPPLPPPHNHTLSHHHSSANSLNRNSLTNRRNQIHAPSMAPNDLPTTPESVQLQDSWVLNSNVPLETRHFLFKTSSGTTPLFSTSSPGYPLTSGTVYSPPPRLLPRSTFSRNAFKLKKPSKYCSWKCAALCSIAASITLAILLAYFIAMHLLDLNWHLQPTDGQIFRNGVGTGDASDVTIAPSAGRGTVAIKNSSIDLGDVDIGRRVSQEVPPAVFWRSQLYIERPQFVKFNVSLGKEALFGLYIRKGFHPSHTQYDFMERLDGKEKWSVVETPRERRSIQTLVINEAVFVQYLDAGTWHLAFYNDGKEKELISFNTVVLDSVQECPHNCHGNGECVSGVCHCFAGFHGADCSKAACPVLCSGNGQYAKGNCMCYSSWKGAECDVPMGQCIDPACSGRGTCTSGACVCSARFKGENCEEVDCLDPTCSSHGVCAHGDCHCNPGWGGLNCEIPRAQCPDQCTGHGTYIPETGLCRCDPDWIGPDCSVEVCSVDCGTHGVCISGICRCEEGWTGLACDQRVCHPRCAEHGSCKDGKCECREGWNGEHCTIDGCPDQCNSNGRCTLSQSSWHCICQTGWRGIGCNVAMETSCTDGKDNEGDGLVDCLDPDCCLQSSCQSNPLCHGSHDPLDIIQQNQWALPTQVVKSFYDRIKLLVGKDRTHIIPGANPFNESLASLIRGQVFTKDGTPLVGVNVSFVKYPQYGYTITRQDGMFDLIANGGASLTLHFERAPFLSQERTVWLPWNTFYAMNTLVMKTEENTIPSCDLSGFVRPEPILVSSPLSTFFSSTPGQNPIIPETQVLHEAVDIPGSNMKLCYLSSRTAGYKSLLKVTMTQSIVPINLIKVHLMVAVEGHLFQKWLHSSPNLAYTYIWDKTDAYSQKVYGLSEAVVSVGYEYESCPNLILWEKRTALLQGYELDPSNLGGWSLDKHHALNIKSGVLHKGNGENQFLSQQPAVISSIMGNGRRRSISCPSCNGLADGNKLLAPVALAVGVDGSLYIGDFNFIRRIFPARNVTSILELRNKDFRHSNNPAHKYFMAVDPVTGALYVSDTNSRQIIRVKSLDGARDLASNAEVVAGTGEQCLPFDEARCGDGGKAVDATLMSPRGIAVDKNGLMYFVDATMIRKVDQNGIISTLLGSNDLTAIRPLSCDSSMDVRLEWPTNLAINPIDNSLYVLENNVILRITENHQVSIIAGRPMHCQVPGIDYSLSKLAIHSALESASAIAVSHTGVLYIAETDEKKINRVRQVTTNGEISLLAGMPSDCDCKNDVNCDCFLGDAGYATDAKLNSPSSLAVSPDGTVFIADLGNVRIRAVNRNKPQANSMGLYEVASAAEQELYIFNSDGVHQYTMSLITGDYIYNLSYSPAGDLAELTDNNGNTLKIRRDSNGVPRHLLMADNQVCSLTMDANGGLKMVSAQNQELVVFTYNGNSGLLATKTDDIGWTTFFDYDSEGRLTNLTHPTGVVTSLHREMERSINIDIETSNREDDVTVTTNLSSVDASYTLVQDQVRNSYQLCNNGSLRVMYANGMGVSFYTEPHILAGTISPTVGRRNITLPVENGLNSIEWRLRKEQVKGKVTVFGRKLRVHGRNLLSIDFDRNSRTEKIYDDHRKFTLRIIYDSLGRPAIWLPSSGLAAVNVSYSPSGKVVGVQRGTMSERNKYDDLGRIVSRVFSDGKVWSYAYLDKSMVLLLQSQRQYIFEFDQTDRLQAVTMPSVARHTMSTHNSIGYIRNIYHPPESNASMVFDFTTEGRILKSAYLG…
SIO_010081: tenm2
subclass of: SO_0000673
so part of: tenm2
location: join(3656630..3656855,3711829..3712098,4084244..4084456,4142493..4142727,4187251..4187489,4228149..4228265,4256032..4256237,4268642..4268837,4286410..4286511,4299136..4299330,4316122..4316322,4317667..4317852,4326586..4326732,4336656..4336872,4342352..4342471,4345180..4345441,4346894..4347161,4365496..4365639,4366645..4366894,4376567..4376587,4383977..4384209,4388591..4388736,4391025..4391899,4394897..4395072,4397356..4397591,4401983..4402279,4410328..4411942,4416732..4416862,4420132..4420437,4420657..4421112)
location: region:3656630-4421112:1
so has part: feature:3656630-3656855:1:exon
so has part: feature:3711829-3712098:1:exon
so has part: feature:4084244-4084456:1:exon
so has part: feature:4142493-4142727:1:exon
so has part: feature:4187251-4187489:1:exon
so has part: feature:4228149-4228265:1:exon
so has part: feature:4256032-4256237:1:exon
so has part: feature:4268642-4268837:1:exon
so has part: feature:4286410-4286511:1:exon
so has part: feature:4299136-4299330:1:exon
so has part: feature:4316122-4316322:1:exon
so has part: feature:4317667-4317852:1:exon
so has part: feature:4326586-4326732:1:exon
so has part: feature:4336656-4336872:1:exon
so has part: feature:4342352-4342471:1:exon
so has part: feature:4345180-4345441:1:exon
so has part: feature:4346894-4347161:1:exon
so has part: feature:4365496-4365639:1:exon
so has part: feature:4366645-4366894:1:exon
so has part: feature:4376567-4376587:1:exon
so has part: feature:4383977-4384209:1:exon
so has part: feature:4388591-4388736:1:exon
so has part: feature:4391025-4391899:1:exon
so has part: feature:4394897-4395072:1:exon
so has part: feature:4397356-4397591:1:exon
so has part: feature:4401983-4402279:1:exon
so has part: feature:4410328-4411942:1:exon
so has part: feature:4416732-4416862:1:exon
so has part: feature:4420132-4420437:1:exon
so has part: feature:4420657-4421112:1:exon

XP_032885095.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3656630-3656855:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3711829-3712098:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4084244-4084456:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4142493-4142727:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4187251-4187489:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4228149-4228265:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4256032-4256237:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4268642-4268837:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4286410-4286511:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4299136-4299330:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4316122-4316322:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4317667-4317852:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4326586-4326732:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4336656-4336872:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4342352-4342471:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4345180-4345441:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4346894-4347161:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4365496-4365639:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4366645-4366894:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4376567-4376587:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4383977-4384209:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4388591-4388736:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4391025-4391899:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4394897-4395072:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4397356-4397591:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4401983-4402279:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4410328-4411942:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4416732-4416862:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4420132-4420437:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4420657-4421112:1:exon

tenm2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tenm2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: teneurin-2 isoform X3
translation: MDVKDRRHRSLTRGRCAKDCRYTSSSLDSEECRVPTQKSYSSSETLKAYDHDARLHYGTRVTELVHREADEFSRQGANFTLTELGICEPSPHHSTAYGPDMGLLHRGYSLSDADSDTEGAISPEHAIRLWGRGIKSRRGSGLSSRENSALTLTDSENEKESEEEEGRPTTHSSSPSHPFAQQTSAHLSSSSVKDYQMPLLDSSISHPALESNVNEEFAINSYLLRAGSGALQPSSNGPPNHHSQSTLRPPLPPPHNHTLSHHHSSANSLNRNSLTNRRNQIHAPSMAPNDLPTTPESVQLQDSWVLNSNVPLETRHFLFKTSSGTTPLFSTSSPGYPLTSGTVYSPPPRLLPRSTFSRNAFKLKKPSKYCSWKCAALCSIAASITLAILLAYFIAMHLLDLNWHLQPTDGQIFRNGVGTGDASDVTIAPSAGRGTVAIKNSSIDLGDVDIGRRVSQEVPPAVFWRSQLYIERPQFVKFNVSLGKEALFGLYIRKGFHPSHTQYDFMERLDGKEKWSVVETPRERRSIQTLVINEAVFVQYLDAGTWHLAFYNDGKEKELISFNTVVLDSVQECPHNCHGNGECVSGVCHCFAGFHGADCSKAACPVLCSGNGQYAKGNCMCYSSWKGAECDVPMGQCIDPACSGRGTCTSGACVCSARFKGENCEEVDCLDPTCSSHGVCAHGDCHCNPGWGGLNCEIPRAQCPDQCTGHGTYIPETGLCRCDPDWIGPDCSVEVCSVDCGTHGVCISGICRCEEGWTGLACDQRVCHPRCAEHGSCKDGKCECREGWNGEHCTIDGCPDQCNSNGRCTLSQSSWHCICQTGWRGIGCNVAMETSCTDGKDNEGDGLVDCLDPDCCLQSSCQSNPLCHGSHDPLDIIQQNQWALPTQVVKSFYDRIKLLVGKDRTHIIPGANPFNESLASLIRGQVFTKDGTPLVGVNVSFVKYPQYGYTITRQDGMFDLIANGGASLTLHFERAPFLSQERTVWLPWNTFYAMNTLVMKTEENTIPSCDLSGFVRPEPILVSSPLSTFFSSTPGQNPIIPETQVLHEAVDIPGSNMKLCYLSSRTAGYKSLLKVTMTQSIVPINLIKVHLMVAVEGHLFQKWLHSSPNLAYTYIWDKTDAYSQKVYGLSEAVVSVGYEYESCPNLILWEKRTALLQGYELDPSNLGGWSLDKHHALNIKSGVLHKGNGENQFLSQQPAVISSIMGNGRRRSISCPSCNGLADGNKLLAPVALAVGVDGSLYIGDFNFIRRIFPARNVTSILELSNNPAHKYFMAVDPVTGALYVSDTNSRQIIRVKSLDGARDLASNAEVVAGTGEQCLPFDEARCGDGGKAVDATLMSPRGIAVDKNGLMYFVDATMIRKVDQNGIISTLLGSNDLTAIRPLSCDSSMDVSQVRLEWPTNLAINPIDNSLYVLENNVILRITENHQVSIIAGRPMHCQVPGIDYSLSKLAIHSALESASAIAVSHTGVLYIAETDEKKINRVRQVTTNGEISLLAGMPSDCDCKNDVNCDCFLGDAGYATDAKLNSPSSLAVSPDGTVFIADLGNVRIRAVNRNKPQANSMGLYEVASAAEQELYIFNSDGVHQYTMSLITGDYIYNLSYSPAGDLAELTDNNGNTLKIRRDSNGVPRHLLMADNQVCSLTMDANGGLKMVSAQNQELVVFTYNGNSGLLATKTDDIGWTTFFDYDSEGRLTNLTHPTGVVTSLHREMERSINIDIETSNREDDVTVTTNLSSVDASYTLVQDQVRNSYQLCNNGSLRVMYANGMGVSFYTEPHILAGTISPTVGRRNITLPVENGLNSIEWRLRKEQVKGKVTVFGRKLRVHGRNLLSIDFDRNSRTEKIYDDHRKFTLRIIYDSLGRPAIWLPSSGLAAVNVSYSPSGKVVGVQRGTMSERNKYDDLGRIVSRVFSDGKVWSYAYLDKSMVLLLQSQRQYIFEFDQTDRLQAVTMPSVARHTMSTHNSIGYIRNIYHPPESNASMVFDFTTEGRILKSAYLGTGRQ…
SIO_010081: tenm2
subclass of: SO_0000673
so part of: tenm2
location: join(3656630..3656855,3711829..3712098,4084244..4084456,4142493..4142727,4187251..4187489,4228149..4228265,4256032..4256237,4268642..4268837,4286410..4286511,4299136..4299330,4316122..4316322,4317667..4317852,4326586..4326732,4336656..4336872,4342352..4342471,4345180..4345441,4346894..4347161,4365496..4365639,4366645..4366894,4383977..4384209,4388591..4388745,4391025..4391899,4394897..4395072,4397356..4397591,4401983..4402279,4410328..4411942,4416732..4416862,4420132..4420437,4420657..4421112)
location: region:3656630-4421112:1
so has part: feature:3656630-3656855:1:exon
so has part: feature:3711829-3712098:1:exon
so has part: feature:4084244-4084456:1:exon
so has part: feature:4142493-4142727:1:exon
so has part: feature:4187251-4187489:1:exon
so has part: feature:4228149-4228265:1:exon
so has part: feature:4256032-4256237:1:exon
so has part: feature:4268642-4268837:1:exon
so has part: feature:4286410-4286511:1:exon
so has part: feature:4299136-4299330:1:exon
so has part: feature:4316122-4316322:1:exon
so has part: feature:4317667-4317852:1:exon
so has part: feature:4326586-4326732:1:exon
so has part: feature:4336656-4336872:1:exon
so has part: feature:4342352-4342471:1:exon
so has part: feature:4345180-4345441:1:exon
so has part: feature:4346894-4347161:1:exon
so has part: feature:4365496-4365639:1:exon
so has part: feature:4366645-4366894:1:exon
so has part: feature:4383977-4384209:1:exon
so has part: feature:4388591-4388745:1:exon
so has part: feature:4391025-4391899:1:exon
so has part: feature:4394897-4395072:1:exon
so has part: feature:4397356-4397591:1:exon
so has part: feature:4401983-4402279:1:exon
so has part: feature:4410328-4411942:1:exon
so has part: feature:4416732-4416862:1:exon
so has part: feature:4420132-4420437:1:exon
so has part: feature:4420657-4421112:1:exon

XP_032885096.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3656630-3656855:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3711829-3712098:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4084244-4084456:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4142493-4142727:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4187251-4187489:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4228149-4228265:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4256032-4256237:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4268642-4268837:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4286410-4286511:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4299136-4299330:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4316122-4316322:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4317667-4317852:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4326586-4326732:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4336656-4336872:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4342352-4342471:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4345180-4345441:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4346894-4347161:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4365496-4365639:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4366645-4366894:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4383977-4384209:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4388591-4388745:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4391025-4391899:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4394897-4395072:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4397356-4397591:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4401983-4402279:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4410328-4411942:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4416732-4416862:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4420132-4420437:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4420657-4421112:1:exon

tenm2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tenm2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: teneurin-2 isoform X4
translation: MDVKDRRHRSLTRGRCAKDCRYTSSSLDSEECRVPTQKSYSSSETLKAYDHDARLHYGTRVTELVHREADEFSRQGANFTLTELGICEPSPHHSTAYGPDMGLLHRGYSLSDADSDTEGAISPEHAIRLWGRGIKSRRGSGLSSRENSALTLTDSENEKESEEEEGRPTTHSSSPSHPFAQQTSAHLSSSSVKDYQMPLLDSSISHPALESNVNEEFAINSYLLRAGSGALQPSSNGPPNHHSQSTLRPPLPPPHNHTLSHHHSSANSLNRNSLTNRRNQIHAPSMAPNDLPTTPESVQLQDSWVLNSNVPLETRHFLFKTSSGTTPLFSTSSPGYPLTSGTVYSPPPRLLPRSTFSRNAFKLKKPSKYCSWKCAALCSIAASITLAILLAYFIGTVAIKNSSIDLGDVDIGRRVSQEVPPAVFWRSQLYIERPQFVKFNVSLGKEALFGLYIRKGFHPSHTQYDFMERLDGKEKWSVVETPRERRSIQTLVINEAVFVQYLDAGTWHLAFYNDGKEKELISFNTVVLDSVQECPHNCHGNGECVSGVCHCFAGFHGADCSKAACPVLCSGNGQYAKGNCMCYSSWKGAECDVPMGQCIDPACSGRGTCTSGACVCSARFKGENCEEVDCLDPTCSSHGVCAHGDCHCNPGWGGLNCEIPRAQCPDQCTGHGTYIPETGLCRCDPDWIGPDCSVEVCSVDCGTHGVCISGICRCEEGWTGLACDQRVCHPRCAEHGSCKDGKCECREGWNGEHCTIDGCPDQCNSNGRCTLSQSSWHCICQTGWRGIGCNVAMETSCTDGKDNEGDGLVDCLDPDCCLQSSCQSNPLCHGSHDPLDIIQQNQWALPTQVVKSFYDRIKLLVGKDRTHIIPGANPFNESLASLIRGQVFTKDGTPLVGVNVSFVKYPQYGYTITRQDGMFDLIANGGASLTLHFERAPFLSQERTVWLPWNTFYAMNTLVMKTEENTIPSCDLSGFVRPEPILVSSPLSTFFSSTPGQNPIIPETQVLHEAVDIPGSNMKLCYLSSRTAGYKSLLKVTMTQSIVPINLIKVHLMVAVEGHLFQKWLHSSPNLAYTYIWDKTDAYSQKVYGLSEAVVSVGYEYESCPNLILWEKRTALLQGYELDPSNLGGWSLDKHHALNIKSGVLHKGNGENQFLSQQPAVISSIMGNGRRRSISCPSCNGLADGNKLLAPVALAVGVDGSLYIGDFNFIRRIFPARNVTSILELRNKDFRHSNNPAHKYFMAVDPVTGALYVSDTNSRQIIRVKSLDGARDLASNAEVVAGTGEQCLPFDEARCGDGGKAVDATLMSPRGIAVDKNGLMYFVDATMIRKVDQNGIISTLLGSNDLTAIRPLSCDSSMDVSQVRLEWPTNLAINPIDNSLYVLENNVILRITENHQVSIIAGRPMHCQVPGIDYSLSKLAIHSALESASAIAVSHTGVLYIAETDEKKINRVRQVTTNGEISLLAGMPSDCDCKNDVNCDCFLGDAGYATDAKLNSPSSLAVSPDGTVFIADLGNVRIRAVNRNKPQANSMGLYEVASAAEQELYIFNSDGVHQYTMSLITGDYIYNLSYSPAGDLAELTDNNGNTLKIRRDSNGVPRHLLMADNQVCSLTMDANGGLKMVSAQNQELVVFTYNGNSGLLATKTDDIGWTTFFDYDSEGRLTNLTHPTGVVTSLHREMERSINIDIETSNREDDVTVTTNLSSVDASYTLVQDQVRNSYQLCNNGSLRVMYANGMGVSFYTEPHILAGTISPTVGRRNITLPVENGLNSIEWRLRKEQVKGKVTVFGRKLRVHGRNLLSIDFDRNSRTEKIYDDHRKFTLRIIYDSLGRPAIWLPSSGLAAVNVSYSPSGKVVGVQRGTMSERNKYDDLGRIVSRVFSDGKVWSYAYLDKSMVLLLQSQRQYIFEFDQTDRLQAVTMPSVARHTMSTHNSIGYIRNIYHPPESNASMVFDFTTEGRILKSAYLGTGRQVFYKYGKLSKLSEILYDSTAVTFGYDESTGVL…
SIO_010081: tenm2
subclass of: SO_0000673
so part of: tenm2
location: join(3656630..3656855,3711829..3712098,4084244..4084456,4142493..4142727,4187251..4187489,4256032..4256237,4268642..4268837,4286410..4286511,4299136..4299330,4316122..4316322,4317667..4317852,4326586..4326732,4336656..4336872,4342352..4342471,4345180..4345441,4346894..4347161,4365496..4365639,4366645..4366894,4376567..4376587,4383977..4384209,4388591..4388745,4391025..4391899,4394897..4395072,4397356..4397591,4401983..4402279,4410328..4411942,4416732..4416862,4420132..4420437,4420657..4421112)
location: region:3656630-4421112:1
so has part: feature:3656630-3656855:1:exon
so has part: feature:3711829-3712098:1:exon
so has part: feature:4084244-4084456:1:exon
so has part: feature:4142493-4142727:1:exon
so has part: feature:4187251-4187489:1:exon
so has part: feature:4256032-4256237:1:exon
so has part: feature:4268642-4268837:1:exon
so has part: feature:4286410-4286511:1:exon
so has part: feature:4299136-4299330:1:exon
so has part: feature:4316122-4316322:1:exon
so has part: feature:4317667-4317852:1:exon
so has part: feature:4326586-4326732:1:exon
so has part: feature:4336656-4336872:1:exon
so has part: feature:4342352-4342471:1:exon
so has part: feature:4345180-4345441:1:exon
so has part: feature:4346894-4347161:1:exon
so has part: feature:4365496-4365639:1:exon
so has part: feature:4366645-4366894:1:exon
so has part: feature:4376567-4376587:1:exon
so has part: feature:4383977-4384209:1:exon
so has part: feature:4388591-4388745:1:exon
so has part: feature:4391025-4391899:1:exon
so has part: feature:4394897-4395072:1:exon
so has part: feature:4397356-4397591:1:exon
so has part: feature:4401983-4402279:1:exon
so has part: feature:4410328-4411942:1:exon
so has part: feature:4416732-4416862:1:exon
so has part: feature:4420132-4420437:1:exon
so has part: feature:4420657-4421112:1:exon

XP_032885097.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3656630-3656855:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3711829-3712098:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4084244-4084456:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4142493-4142727:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4187251-4187489:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4256032-4256237:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4268642-4268837:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4286410-4286511:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4299136-4299330:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4316122-4316322:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4317667-4317852:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4326586-4326732:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4336656-4336872:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4342352-4342471:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4345180-4345441:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4346894-4347161:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4365496-4365639:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4366645-4366894:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4376567-4376587:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4383977-4384209:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4388591-4388745:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4391025-4391899:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4394897-4395072:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4397356-4397591:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4401983-4402279:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4410328-4411942:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4416732-4416862:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4420132-4420437:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4420657-4421112:1:exon

tenm2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tenm2
product: teneurin transmembrane protein 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033029207.1
SIO_010081: tenm2
subclass of: SO_0000673
so part of: tenm2
location: join(3906553..3906852,4084244..4084456,4142493..4142727,4187251..4187489,4228149..4228265,4256032..4256237,4268642..4268837,4286410..4286511,4299136..4299330,4316122..4316322,4317667..4317852,4326586..4326732,4336656..4336872,4342352..4342471,4345180..4345441,4346894..4347161,4365496..4365639,4366645..4366894,4376567..4376587,4383977..4384209,4388591..4388745,4391025..4391899,4394897..4395072,4397356..4397591,4401983..4402279,4410328..4411942,4416732..4416862,4420132..4420437,4420657..4421840)
location: region:3906553-4421840:1
so has part: feature:3906553-3906852:1:exon
so has part: feature:4084244-4084456:1:exon
so has part: feature:4142493-4142727:1:exon
so has part: feature:4187251-4187489:1:exon
so has part: feature:4228149-4228265:1:exon
so has part: feature:4256032-4256237:1:exon
so has part: feature:4268642-4268837:1:exon
so has part: feature:4286410-4286511:1:exon
so has part: feature:4299136-4299330:1:exon
so has part: feature:4316122-4316322:1:exon
so has part: feature:4317667-4317852:1:exon
so has part: feature:4326586-4326732:1:exon
so has part: feature:4336656-4336872:1:exon
so has part: feature:4342352-4342471:1:exon
so has part: feature:4345180-4345441:1:exon
so has part: feature:4346894-4347161:1:exon
so has part: feature:4365496-4365639:1:exon
so has part: feature:4366645-4366894:1:exon
so has part: feature:4376567-4376587:1:exon
so has part: feature:4383977-4384209:1:exon
so has part: feature:4388591-4388745:1:exon
so has part: feature:4391025-4391899:1:exon
so has part: feature:4394897-4395072:1:exon
so has part: feature:4397356-4397591:1:exon
so has part: feature:4401983-4402279:1:exon
so has part: feature:4410328-4411942:1:exon
so has part: feature:4416732-4416862:1:exon
so has part: feature:4420132-4420437:1:exon
so has part: feature:4420657-4421840:1:exon

position:3906553:1
position: 3906553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3906553-3906852:1:exon

position:3906852:1
position: 3906852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4084244-4084456:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4142493-4142727:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4187251-4187489:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4228149-4228265:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4256032-4256237:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4268642-4268837:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4286410-4286511:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4299136-4299330:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4316122-4316322:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4317667-4317852:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4326586-4326732:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4336656-4336872:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4342352-4342471:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4345180-4345441:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4346894-4347161:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4365496-4365639:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4366645-4366894:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4376567-4376587:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4383977-4384209:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4388591-4388745:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4391025-4391899:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4394897-4395072:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4397356-4397591:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4401983-4402279:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4410328-4411942:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4416732-4416862:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4420132-4420437:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4420657-4421840:1:exon

tenm2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tenm2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: teneurin-2 isoform X5
translation: MLPSGTAKHKKFPTEPGRPTTHSSSPSHPFAQQTSAHLSSSSVKDYQMPLLDSSISHPALESNVNEEFAINSYLLRAGSGALQPSSNGPPNHHSQSTLRPPLPPPHNHTLSHHHSSANSLNRNSLTNRRNQIHAPSMAPNDLPTTPESVQLQDSWVLNSNVPLETRHFLFKTSSGTTPLFSTSSPGYPLTSGTVYSPPPRLLPRSTFSRNAFKLKKPSKYCSWKCAALCSIAASITLAILLAYFIAMHLLDLNWHLQPTDGQIFRNGVGTGDASDVTIAPSAGRGTVAIKNSSIDLGDVDIGRRVSQEVPPAVFWRSQLYIERPQFVKFNVSLGKEALFGLYIRKGFHPSHTQYDFMERLDGKEKWSVVETPRERRSIQTLVINEAVFVQYLDAGTWHLAFYNDGKEKELISFNTVVLDSVQECPHNCHGNGECVSGVCHCFAGFHGADCSKAACPVLCSGNGQYAKGNCMCYSSWKGAECDVPMGQCIDPACSGRGTCTSGACVCSARFKGENCEEVDCLDPTCSSHGVCAHGDCHCNPGWGGLNCEIPRAQCPDQCTGHGTYIPETGLCRCDPDWIGPDCSVEVCSVDCGTHGVCISGICRCEEGWTGLACDQRVCHPRCAEHGSCKDGKCECREGWNGEHCTIDGCPDQCNSNGRCTLSQSSWHCICQTGWRGIGCNVAMETSCTDGKDNEGDGLVDCLDPDCCLQSSCQSNPLCHGSHDPLDIIQQNQWALPTQVVKSFYDRIKLLVGKDRTHIIPGANPFNESLASLIRGQVFTKDGTPLVGVNVSFVKYPQYGYTITRQDGMFDLIANGGASLTLHFERAPFLSQERTVWLPWNTFYAMNTLVMKTEENTIPSCDLSGFVRPEPILVSSPLSTFFSSTPGQNPIIPETQVLHEAVDIPGSNMKLCYLSSRTAGYKSLLKVTMTQSIVPINLIKVHLMVAVEGHLFQKWLHSSPNLAYTYIWDKTDAYSQKVYGLSEAVVSVGYEYESCPNLILWEKRTALLQGYELDPSNLGGWSLDKHHALNIKSGVLHKGNGENQFLSQQPAVISSIMGNGRRRSISCPSCNGLADGNKLLAPVALAVGVDGSLYIGDFNFIRRIFPARNVTSILELRNKDFRHSNNPAHKYFMAVDPVTGALYVSDTNSRQIIRVKSLDGARDLASNAEVVAGTGEQCLPFDEARCGDGGKAVDATLMSPRGIAVDKNGLMYFVDATMIRKVDQNGIISTLLGSNDLTAIRPLSCDSSMDVSQVRLEWPTNLAINPIDNSLYVLENNVILRITENHQVSIIAGRPMHCQVPGIDYSLSKLAIHSALESASAIAVSHTGVLYIAETDEKKINRVRQVTTNGEISLLAGMPSDCDCKNDVNCDCFLGDAGYATDAKLNSPSSLAVSPDGTVFIADLGNVRIRAVNRNKPQANSMGLYEVASAAEQELYIFNSDGVHQYTMSLITGDYIYNLSYSPAGDLAELTDNNGNTLKIRRDSNGVPRHLLMADNQVCSLTMDANGGLKMVSAQNQELVVFTYNGNSGLLATKTDDIGWTTFFDYDSEGRLTNLTHPTGVVTSLHREMERSINIDIETSNREDDVTVTTNLSSVDASYTLVQDQVRNSYQLCNNGSLRVMYANGMGVSFYTEPHILAGTISPTVGRRNITLPVENGLNSIEWRLRKEQVKGKVTVFGRKLRVHGRNLLSIDFDRNSRTEKIYDDHRKFTLRIIYDSLGRPAIWLPSSGLAAVNVSYSPSGKVVGVQRGTMSERNKYDDLGRIVSRVFSDGKVWSYAYLDKSMVLLLQSQRQYIFEFDQTDRLQAVTMPSVARHTMSTHNSIGYIRNIYHPPESNASMVFDFTTEGRILKSAYLGTGRQVFYKYGKLSKLSEILYDSTAVTFGYDESTGVLKMVNLQNGGFSCTIRYRKVGPLIDRQIYRFSEEGMVNARFDYTYHDNSFRIASMKPIISETPLPVDVYRYDEISGKVEHFGKFGVIYYDINQIITTAVMTLSKHFDTHGR…
SIO_010081: tenm2
subclass of: SO_0000673
so part of: tenm2
location: join(3906804..3906852,4084244..4084456,4142493..4142727,4187251..4187489,4228149..4228265,4256032..4256237,4268642..4268837,4286410..4286511,4299136..4299330,4316122..4316322,4317667..4317852,4326586..4326732,4336656..4336872,4342352..4342471,4345180..4345441,4346894..4347161,4365496..4365639,4366645..4366894,4376567..4376587,4383977..4384209,4388591..4388745,4391025..4391899,4394897..4395072,4397356..4397591,4401983..4402279,4410328..4411942,4416732..4416862,4420132..4420437,4420657..4421112)
location: region:3906804-4421112:1
so has part: feature:3906804-3906852:1:exon
so has part: feature:4084244-4084456:1:exon
so has part: feature:4142493-4142727:1:exon
so has part: feature:4187251-4187489:1:exon
so has part: feature:4228149-4228265:1:exon
so has part: feature:4256032-4256237:1:exon
so has part: feature:4268642-4268837:1:exon
so has part: feature:4286410-4286511:1:exon
so has part: feature:4299136-4299330:1:exon
so has part: feature:4316122-4316322:1:exon
so has part: feature:4317667-4317852:1:exon
so has part: feature:4326586-4326732:1:exon
so has part: feature:4336656-4336872:1:exon
so has part: feature:4342352-4342471:1:exon
so has part: feature:4345180-4345441:1:exon
so has part: feature:4346894-4347161:1:exon
so has part: feature:4365496-4365639:1:exon
so has part: feature:4366645-4366894:1:exon
so has part: feature:4376567-4376587:1:exon
so has part: feature:4383977-4384209:1:exon
so has part: feature:4388591-4388745:1:exon
so has part: feature:4391025-4391899:1:exon
so has part: feature:4394897-4395072:1:exon
so has part: feature:4397356-4397591:1:exon
so has part: feature:4401983-4402279:1:exon
so has part: feature:4410328-4411942:1:exon
so has part: feature:4416732-4416862:1:exon
so has part: feature:4420132-4420437:1:exon
so has part: feature:4420657-4421112:1:exon

XP_032885098.1
type: Protein
SIO_000068: ncbiprotein

position:3906804:1
position: 3906804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3906804-3906852:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4084244-4084456:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4142493-4142727:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4187251-4187489:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4228149-4228265:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4256032-4256237:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4268642-4268837:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4286410-4286511:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4299136-4299330:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4316122-4316322:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4317667-4317852:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4326586-4326732:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4336656-4336872:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4342352-4342471:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4345180-4345441:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4346894-4347161:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4365496-4365639:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4366645-4366894:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4376567-4376587:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4383977-4384209:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4388591-4388745:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4391025-4391899:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4394897-4395072:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4397356-4397591:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4401983-4402279:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4410328-4411942:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4416732-4416862:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4420132-4420437:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4420657-4421112:1:exon

LOC116978217
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116978217
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4146958..4156088)
location: region:4146958-4156088:-1
so has part: feature:4146958-4156088:-1:exon
subclass of: SO_0000011

116978217
type: Gene
SIO_000068: ncbigene

position:4146958:-1
position: 4146958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4156088:-1
position: 4156088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4146958-4156088:-1:exon

LOC116978217
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116978217
product: uncharacterized LOC116978217
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004413418.1
SIO_010081: LOC116978217
subclass of: SO_0000673
so part of: LOC116978217
location: complement(join(4146958..4147009,4155561..4155565,4156079..4156088))
location: region:4146958-4156088:-1
so has part: feature:4156079-4156088:-1:exon
so has part: feature:4155561-4155565:-1:exon
so has part: feature:4146958-4147009:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4156079-4156088:-1:exon

position:4156079:-1
position: 4156079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4155561-4155565:-1:exon

position:4155561:-1
position: 4155561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4155565:-1
position: 4155565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4146958-4147009:-1:exon

position:4147009:-1
position: 4147009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

wwc1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: wwc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4444865..4515223
location: region:4444865-4515223:1
so has part: feature:4444865-4515223:1:exon
subclass of: SO_0000010

116978218
type: Gene
SIO_000068: ncbigene

position:4444865:1
position: 4444865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4515223:1
position: 4515223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4444865-4515223:1:exon

wwc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: wwc1
product: WW and C2 domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033029209.1
SIO_010081: wwc1
subclass of: SO_0000673
so part of: wwc1
location: join(4444865..4444875,4461230..4461499,4478081..4478190,4480142..4480345,4481456..4481532,4482549..4482628,4488841..4488970,4490136..4490282,4492971..4493044,4493817..4494059,4494967..4495056,4495370..4496052,4499637..4499757,4500095..4500172,4500643..4500729,4501353..4501545,4502575..4502742,4505720..4505820,4507289..4507454,4508839..4509003,4510497..4510589,4512157..4512387,4513615..4513742,4514912..4515223)
location: region:4444865-4515223:1
so has part: feature:4444865-4444875:1:exon
so has part: feature:4461230-4461499:1:exon
so has part: feature:4478081-4478190:1:exon
so has part: feature:4480142-4480345:1:exon
so has part: feature:4481456-4481532:1:exon
so has part: feature:4482549-4482628:1:exon
so has part: feature:4488841-4488970:1:exon
so has part: feature:4490136-4490282:1:exon
so has part: feature:4492971-4493044:1:exon
so has part: feature:4493817-4494059:1:exon
so has part: feature:4494967-4495056:1:exon
so has part: feature:4495370-4496052:1:exon
so has part: feature:4499637-4499757:1:exon
so has part: feature:4500095-4500172:1:exon
so has part: feature:4500643-4500729:1:exon
so has part: feature:4501353-4501545:1:exon
so has part: feature:4502575-4502742:1:exon
so has part: feature:4505720-4505820:1:exon
so has part: feature:4507289-4507454:1:exon
so has part: feature:4508839-4509003:1:exon
so has part: feature:4510497-4510589:1:exon
so has part: feature:4512157-4512387:1:exon
so has part: feature:4513615-4513742:1:exon
so has part: feature:4514912-4515223:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4444865-4444875:1:exon

position:4444875:1
position: 4444875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4461230-4461499:1:exon

position:4461230:1
position: 4461230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4461499:1
position: 4461499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4478081-4478190:1:exon

position:4478081:1
position: 4478081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4478190:1
position: 4478190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4480142-4480345:1:exon

position:4480142:1
position: 4480142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4480345:1
position: 4480345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4481456-4481532:1:exon

position:4481456:1
position: 4481456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4481532:1
position: 4481532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4482549-4482628:1:exon

position:4482549:1
position: 4482549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4482628:1
position: 4482628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4488841-4488970:1:exon

position:4488841:1
position: 4488841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4488970:1
position: 4488970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4490136-4490282:1:exon

position:4490136:1
position: 4490136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4490282:1
position: 4490282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4492971-4493044:1:exon

position:4492971:1
position: 4492971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4493044:1
position: 4493044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4493817-4494059:1:exon

position:4493817:1
position: 4493817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4494059:1
position: 4494059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4494967-4495056:1:exon

position:4494967:1
position: 4494967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4495056:1
position: 4495056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4495370-4496052:1:exon

position:4495370:1
position: 4495370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4496052:1
position: 4496052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4499637-4499757:1:exon

position:4499637:1
position: 4499637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4499757:1
position: 4499757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4500095-4500172:1:exon

position:4500095:1
position: 4500095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4500172:1
position: 4500172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4500643-4500729:1:exon

position:4500643:1
position: 4500643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4500729:1
position: 4500729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4501353-4501545:1:exon

position:4501353:1
position: 4501353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4501545:1
position: 4501545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4502575-4502742:1:exon

position:4502575:1
position: 4502575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4502742:1
position: 4502742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4505720-4505820:1:exon

position:4505720:1
position: 4505720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4505820:1
position: 4505820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4507289-4507454:1:exon

position:4507289:1
position: 4507289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4507454:1
position: 4507454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4508839-4509003:1:exon

position:4508839:1
position: 4508839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4509003:1
position: 4509003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4510497-4510589:1:exon

position:4510497:1
position: 4510497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4510589:1
position: 4510589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4512157-4512387:1:exon

position:4512157:1
position: 4512157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4512387:1
position: 4512387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4513615-4513742:1:exon

position:4513615:1
position: 4513615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4513742:1
position: 4513742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:4514912-4515223:1:exon

position:4514912:1
position: 4514912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116978220
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116978220
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4456872..4457701)
location: region:4456872-4457701:-1
so has part: feature:4456872-4457701:-1:exon
subclass of: SO_0000011

116978220
type: Gene
SIO_000068: ncbigene

position:4456872:-1
position: 4456872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4457701:-1
position: 4457701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4456872-4457701:-1:exon

LOC116978220
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116978220
product: uncharacterized LOC116978220
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004413420.1
SIO_010081: LOC116978220
subclass of: SO_0000673
so part of: LOC116978220
location: complement(join(4456872..4457447,4457540..4457701))
location: region:4456872-4457701:-1
so has part: feature:4457540-4457701:-1:exon
so has part: feature:4456872-4457447:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4457540-4457701:-1:exon

position:4457540:-1
position: 4457540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4456872-4457447:-1:exon

position:4457447:-1
position: 4457447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

wwc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: wwc1
product: WW and C2 domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033029210.1
SIO_010081: wwc1
subclass of: SO_0000673
so part of: wwc1
location: join(4459350..4459364,4461230..4461499,4478081..4478190,4480142..4480345,4481456..4481532,4482549..4482628,4488841..4488970,4490136..4490282,4492971..4493044,4493817..4494059,4494967..4495056,4495370..4496052,4499637..4499757,4500095..4500172,4500643..4500729,4501353..4501545,4502575..4502742,4505720..4505820,4507289..4507454,4508839..4509003,4510497..4510589,4512157..4512387,4513615..4513742,4514912..4515223)
location: region:4459350-4515223:1
so has part: feature:4459350-4459364:1:exon
so has part: feature:4461230-4461499:1:exon
so has part: feature:4478081-4478190:1:exon
so has part: feature:4480142-4480345:1:exon
so has part: feature:4481456-4481532:1:exon
so has part: feature:4482549-4482628:1:exon
so has part: feature:4488841-4488970:1:exon
so has part: feature:4490136-4490282:1:exon
so has part: feature:4492971-4493044:1:exon
so has part: feature:4493817-4494059:1:exon
so has part: feature:4494967-4495056:1:exon
so has part: feature:4495370-4496052:1:exon
so has part: feature:4499637-4499757:1:exon
so has part: feature:4500095-4500172:1:exon
so has part: feature:4500643-4500729:1:exon
so has part: feature:4501353-4501545:1:exon
so has part: feature:4502575-4502742:1:exon
so has part: feature:4505720-4505820:1:exon
so has part: feature:4507289-4507454:1:exon
so has part: feature:4508839-4509003:1:exon
so has part: feature:4510497-4510589:1:exon
so has part: feature:4512157-4512387:1:exon
so has part: feature:4513615-4513742:1:exon
so has part: feature:4514912-4515223:1:exon

position:4459350:1
position: 4459350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4459350-4459364:1:exon

position:4459364:1
position: 4459364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4461230-4461499:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4478081-4478190:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4480142-4480345:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4481456-4481532:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4482549-4482628:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4488841-4488970:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4490136-4490282:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4492971-4493044:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4493817-4494059:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4494967-4495056:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4495370-4496052:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4499637-4499757:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4500095-4500172:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4500643-4500729:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4501353-4501545:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4502575-4502742:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4505720-4505820:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4507289-4507454:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4508839-4509003:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4510497-4510589:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4512157-4512387:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4513615-4513742:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4514912-4515223:1:exon

wwc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: wwc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein KIBRA
translation: MPRPECGRRRQLLLLPPPPLPPGWEEATDHDGKRYYIDHNARQTSWVDPRDRWTKPLSFGDCVGDELPLGWEEAFDAQVGVYYIDHNTKTTQVEDPRAQWRREQELMLKDYLVVAQDALTAQKEIYQVKQQRLELAQHEYKQLYDVWKDKSGSQTSLFSGSSSSTKYDPDILKAEISTTKSRVKKLKRELTHMRHELQYKEQGFETLKAIDLKMSGAQGGYKLDEAKAIVSEMKTIKKAISSGEKEKRDLIQSLARLKDGFQLKTEFQSDLWNSDPSLVNSNQSVSRHCSDVGSQTDISGDFVCGRNTKLAEKVRLSLQYEESKRRISDIKIELAKLTSEAWPGVLDAEQDRLILINEKEELLKELQFINPRKWVPSEVERLEMERKQLAEDLQVARDTQSKALTERLKMHSKRNYLLRELEEATRIASTLHSQLQSLSTSTLSLSSGSSKGSLTSSHGSLGASSMGSSSSISFTDLYYDHPEQTVDLDYQYKLDILLQEDTSSNRPANSITTIHENEVVNTRNYSSHTDTYGNPKKIHARRFLSETPKSLTSLSPRSSLSSLSPPGSPVVRDIHFLISSGESLLSHANADFEDAELPDVIANFSLHTANDDQIPSESVPSETVFLPSLNLETENKSEDGPFNYSSNLKSEETGISTKSNEAIEDASTQTEVPGPILHPKIACVSAAVSDESVAGDSGVYEAVKRSCETEDALFDEEIEALGATRLQIAMKYDDRSKRFAIFIIQLNNPAALIIPQNQTIYVRVAVLPSSENASCLFRTKTLLVAESVAYNEVFWVTISFSALRQKTLRVDVCSVDKSHREECLGGAQISLANVNRSGDRSMHWYNLLSSPYLQEQNIRHCAQDEAVLQSEVNHNTSEQKDSISTLLEQTAAELETVERRLESHRNILSAEEEWHEVPAEGGDFGEREIAEDEDQDVYIGVPWENEHDAETPNEHTDSWSTVTAVAAMKIDKETSTEEIVATTSAVRPKDRRVSNTQQSPFVRGSAIIRSKTFSPGAQNSYVCRLNRSDSDSSTLSKRSPFVRNAMERRSLRMKMPSIRRVGSERVIRTSLDLELDLQASRTRKNRLSQELDILRDLKQQIDEAKARGETELPQSVKEDERFQTLLKQIEKQAEQTKEQQKQEIKVQRLMKKTSKEVHKLREQSQKEPLEMQSFWEKMAFFTRGRGSFLPLPADDV
SIO_010081: wwc1
subclass of: SO_0000673
so part of: wwc1
location: join(4461345..4461499,4478081..4478190,4480142..4480345,4481456..4481532,4482549..4482628,4488841..4488970,4490136..4490282,4492971..4493044,4493817..4494059,4494967..4495056,4495370..4496052,4499637..4499757,4500095..4500172,4500643..4500729,4501353..4501545,4502575..4502742,4505720..4505820,4507289..4507454,4508839..4509003,4510497..4510589,4512157..4512387,4513615..4513742,4514912..4514978)
location: region:4461345-4514978:1
so has part: feature:4461345-4461499:1:exon
so has part: feature:4478081-4478190:1:exon
so has part: feature:4480142-4480345:1:exon
so has part: feature:4481456-4481532:1:exon
so has part: feature:4482549-4482628:1:exon
so has part: feature:4488841-4488970:1:exon
so has part: feature:4490136-4490282:1:exon
so has part: feature:4492971-4493044:1:exon
so has part: feature:4493817-4494059:1:exon
so has part: feature:4494967-4495056:1:exon
so has part: feature:4495370-4496052:1:exon
so has part: feature:4499637-4499757:1:exon
so has part: feature:4500095-4500172:1:exon
so has part: feature:4500643-4500729:1:exon
so has part: feature:4501353-4501545:1:exon
so has part: feature:4502575-4502742:1:exon
so has part: feature:4505720-4505820:1:exon
so has part: feature:4507289-4507454:1:exon
so has part: feature:4508839-4509003:1:exon
so has part: feature:4510497-4510589:1:exon
so has part: feature:4512157-4512387:1:exon
so has part: feature:4513615-4513742:1:exon
so has part: feature:4514912-4514978:1:exon

XP_032885100.1
type: Protein
SIO_000068: ncbiprotein

position:4461345:1
position: 4461345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4514978:1
position: 4514978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4461345-4461499:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4478081-4478190:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4480142-4480345:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4481456-4481532:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4482549-4482628:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4488841-4488970:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4490136-4490282:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4492971-4493044:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4493817-4494059:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4494967-4495056:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4495370-4496052:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4499637-4499757:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4500095-4500172:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4500643-4500729:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4501353-4501545:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4502575-4502742:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4505720-4505820:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4507289-4507454:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4508839-4509003:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4510497-4510589:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4512157-4512387:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4513615-4513742:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4514912-4514978:1:exon

wwc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: wwc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein KIBRA
translation: MPRPECGRRRQLLLLPPPPLPPGWEEATDHDGKRYYIDHNARQTSWVDPRDRWTKPLSFGDCVGDELPLGWEEAFDAQVGVYYIDHNTKTTQVEDPRAQWRREQELMLKDYLVVAQDALTAQKEIYQVKQQRLELAQHEYKQLYDVWKDKSGSQTSLFSGSSSSTKYDPDILKAEISTTKSRVKKLKRELTHMRHELQYKEQGFETLKAIDLKMSGAQGGYKLDEAKAIVSEMKTIKKAISSGEKEKRDLIQSLARLKDGFQLKTEFQSDLWNSDPSLVNSNQSVSRHCSDVGSQTDISGDFVCGRNTKLAEKVRLSLQYEESKRRISDIKIELAKLTSEAWPGVLDAEQDRLILINEKEELLKELQFINPRKWVPSEVERLEMERKQLAEDLQVARDTQSKALTERLKMHSKRNYLLRELEEATRIASTLHSQLQSLSTSTLSLSSGSSKGSLTSSHGSLGASSMGSSSSISFTDLYYDHPEQTVDLDYQYKLDILLQEDTSSNRPANSITTIHENEVVNTRNYSSHTDTYGNPKKIHARRFLSETPKSLTSLSPRSSLSSLSPPGSPVVRDIHFLISSGESLLSHANADFEDAELPDVIANFSLHTANDDQIPSESVPSETVFLPSLNLETENKSEDGPFNYSSNLKSEETGISTKSNEAIEDASTQTEVPGPILHPKIACVSAAVSDESVAGDSGVYEAVKRSCETEDALFDEEIEALGATRLQIAMKYDDRSKRFAIFIIQLNNPAALIIPQNQTIYVRVAVLPSSENASCLFRTKTLLVAESVAYNEVFWVTISFSALRQKTLRVDVCSVDKSHREECLGGAQISLANVNRSGDRSMHWYNLLSSPYLQEQNIRHCAQDEAVLQSEVNHNTSEQKDSISTLLEQTAAELETVERRLESHRNILSAEEEWHEVPAEGGDFGEREIAEDEDQDVYIGVPWENEHDAETPNEHTDSWSTVTAVAAMKIDKETSTEEIVATTSAVRPKDRRVSNTQQSPFVRGSAIIRSKTFSPGAQNSYVCRLNRSDSDSSTLSKRSPFVRNAMERRSLRMKMPSIRRVGSERVIRTSLDLELDLQASRTRKNRLSQELDILRDLKQQIDEAKARGETELPQSVKEDERFQTLLKQIEKQAEQTKEQQKQEIKVQRLMKKTSKEVHKLREQSQKEPLEMQSFWEKMAFFTRGRGSFLPLPADDV
SIO_010081: wwc1
subclass of: SO_0000673
so part of: wwc1
location: join(4461345..4461499,4478081..4478190,4480142..4480345,4481456..4481532,4482549..4482628,4488841..4488970,4490136..4490282,4492971..4493044,4493817..4494059,4494967..4495056,4495370..4496052,4499637..4499757,4500095..4500172,4500643..4500729,4501353..4501545,4502575..4502742,4505720..4505820,4507289..4507454,4508839..4509003,4510497..4510589,4512157..4512387,4513615..4513742,4514912..4514978)
location: region:4461345-4514978:1
so has part: feature:4461345-4461499:1:exon
so has part: feature:4478081-4478190:1:exon
so has part: feature:4480142-4480345:1:exon
so has part: feature:4481456-4481532:1:exon
so has part: feature:4482549-4482628:1:exon
so has part: feature:4488841-4488970:1:exon
so has part: feature:4490136-4490282:1:exon
so has part: feature:4492971-4493044:1:exon
so has part: feature:4493817-4494059:1:exon
so has part: feature:4494967-4495056:1:exon
so has part: feature:4495370-4496052:1:exon
so has part: feature:4499637-4499757:1:exon
so has part: feature:4500095-4500172:1:exon
so has part: feature:4500643-4500729:1:exon
so has part: feature:4501353-4501545:1:exon
so has part: feature:4502575-4502742:1:exon
so has part: feature:4505720-4505820:1:exon
so has part: feature:4507289-4507454:1:exon
so has part: feature:4508839-4509003:1:exon
so has part: feature:4510497-4510589:1:exon
so has part: feature:4512157-4512387:1:exon
so has part: feature:4513615-4513742:1:exon
so has part: feature:4514912-4514978:1:exon

XP_032885101.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4461345-4461499:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4478081-4478190:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4480142-4480345:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4481456-4481532:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4482549-4482628:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4488841-4488970:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4490136-4490282:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4492971-4493044:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4493817-4494059:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4494967-4495056:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4495370-4496052:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4499637-4499757:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4500095-4500172:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4500643-4500729:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4501353-4501545:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4502575-4502742:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4505720-4505820:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4507289-4507454:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4508839-4509003:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4510497-4510589:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4512157-4512387:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4513615-4513742:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4514912-4514978:1:exon

LOC116978219
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116978219
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4517076..4523104
location: region:4517076-4523104:1
so has part: feature:4517076-4523104:1:exon
subclass of: SO_0000011

116978219
type: Gene
SIO_000068: ncbigene

position:4517076:1
position: 4517076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4523104:1
position: 4523104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4517076-4523104:1:exon

LOC116978219
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116978219
product: uncharacterized LOC116978219
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004413419.1
SIO_010081: LOC116978219
subclass of: SO_0000673
so part of: LOC116978219
location: join(4517076..4518683,4518747..4523104)
location: region:4517076-4523104:1
so has part: feature:4517076-4518683:1:exon
so has part: feature:4518747-4523104:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4517076-4518683:1:exon

position:4518683:1
position: 4518683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4518747-4523104:1:exon

position:4518747:1
position: 4518747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

rars1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: rars1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4525326..4565897
location: region:4525326-4565897:1
so has part: feature:4525326-4565897:1:exon
subclass of: SO_0000010

116978222
type: Gene
SIO_000068: ncbigene

position:4525326:1
position: 4525326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4565897:1
position: 4565897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4525326-4565897:1:exon

rars1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: rars1
product: arginyl-tRNA synthetase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_033029212.1
SIO_010081: rars1
subclass of: SO_0000673
so part of: rars1
location: join(4525326..4525439,4531943..4532077,4534082..4534270,4535500..4535608,4537291..4537391,4539460..4539581,4545109..4545229,4546534..4546663,4548292..4548396,4550515..4550693,4552326..4552435,4554247..4554352,4556162..4556334,4562667..4562914,4565728..4565897)
location: region:4525326-4565897:1
so has part: feature:4525326-4525439:1:exon
so has part: feature:4531943-4532077:1:exon
so has part: feature:4534082-4534270:1:exon
so has part: feature:4535500-4535608:1:exon
so has part: feature:4537291-4537391:1:exon
so has part: feature:4539460-4539581:1:exon
so has part: feature:4545109-4545229:1:exon
so has part: feature:4546534-4546663:1:exon
so has part: feature:4548292-4548396:1:exon
so has part: feature:4550515-4550693:1:exon
so has part: feature:4552326-4552435:1:exon
so has part: feature:4554247-4554352:1:exon
so has part: feature:4556162-4556334:1:exon
so has part: feature:4562667-4562914:1:exon
so has part: feature:4565728-4565897:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4525326-4525439:1:exon

position:4525439:1
position: 4525439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4531943-4532077:1:exon

position:4531943:1
position: 4531943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4532077:1
position: 4532077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4534082-4534270:1:exon

position:4534082:1
position: 4534082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4534270:1
position: 4534270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4535500-4535608:1:exon

position:4535500:1
position: 4535500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4535608:1
position: 4535608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4537291-4537391:1:exon

position:4537291:1
position: 4537291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4537391:1
position: 4537391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4539460-4539581:1:exon

position:4539460:1
position: 4539460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4539581:1
position: 4539581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4545109-4545229:1:exon

position:4545109:1
position: 4545109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4545229:1
position: 4545229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4546534-4546663:1:exon

position:4546534:1
position: 4546534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4546663:1
position: 4546663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4548292-4548396:1:exon

position:4548292:1
position: 4548292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4548396:1
position: 4548396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4550515-4550693:1:exon

position:4550515:1
position: 4550515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4550693:1
position: 4550693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4552326-4552435:1:exon

position:4552326:1
position: 4552326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4552435:1
position: 4552435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4554247-4554352:1:exon

position:4554247:1
position: 4554247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4554352:1
position: 4554352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4556162-4556334:1:exon

position:4556162:1
position: 4556162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4556334:1
position: 4556334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4562667-4562914:1:exon

position:4562667:1
position: 4562667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4562914:1
position: 4562914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4565728-4565897:1:exon

position:4565728:1
position: 4565728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

rars1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: rars1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arginine--tRNA ligase, cytoplasmic
translation: MASAAGEYRARLKEQEKEIRSLVAEIERLKNPLVPDISPGLSEMQEENAKLKYRLNVLKRSLQEEESKGGASMININQRLQGIFRIAIKLAYPHLENPPLAVTPSQGSKFGDYQCNSAMAISQLLKAEGEKSNPREIAQKIVNSIPKNDIIENVDIAGPGFINVDLKREFVSKLLKSLLVNGVQPPLVGPKKKVVIDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFVGYDVLRLNHVGDWGTQFGMLIAHLHDKFPDFLKVSPPISDLQVFYKESKKRFDEEEAFKKRAYQCVVKLQNHDPDVIKAWNMICDVSRKEFQKIYERLDIKLIERGESYYQDMMNDVVKSFEEKGMAQLDEGRKIVFPPGCSVPLTIVKSDGGYTYDTSDLAALRHRIFEEKADIIIYVVDNGQSVHFQTIFAAAQMIGWYDPKEIRVEHTGFGVVLGEDKKKFKTRSGETVRLADLLDEGLKRSMDKLLEKEREKVLTPEELNAAKEAVAFGCIKYADLSHNRTNDYVFSFDKMLDDRGNTAAYLLYALTRIRSITRLAKIDDVTLQRAAAETTMLLTHDKEWKLGKCVLRFAEILHKILDDLYLHTLCDYLFELATTFTEFYDSCYCVEKDRQTGEVVKVNMWRMLLCEATAAVMAKGFAILGLKPVHRM
SIO_010081: rars1
subclass of: SO_0000673
so part of: rars1
location: join(4525395..4525439,4531943..4532077,4534082..4534270,4535500..4535608,4537291..4537391,4539460..4539581,4545109..4545229,4546534..4546663,4548292..4548396,4550515..4550693,4552326..4552435,4554247..4554352,4556162..4556334,4562667..4562914,4565728..4565837)
location: region:4525395-4565837:1
so has part: feature:4525395-4525439:1:exon
so has part: feature:4531943-4532077:1:exon
so has part: feature:4534082-4534270:1:exon
so has part: feature:4535500-4535608:1:exon
so has part: feature:4537291-4537391:1:exon
so has part: feature:4539460-4539581:1:exon
so has part: feature:4545109-4545229:1:exon
so has part: feature:4546534-4546663:1:exon
so has part: feature:4548292-4548396:1:exon
so has part: feature:4550515-4550693:1:exon
so has part: feature:4552326-4552435:1:exon
so has part: feature:4554247-4554352:1:exon
so has part: feature:4556162-4556334:1:exon
so has part: feature:4562667-4562914:1:exon
so has part: feature:4565728-4565837:1:exon

XP_032885103.1
type: Protein
SIO_000068: ncbiprotein

position:4525395:1
position: 4525395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4565837:1
position: 4565837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4525395-4525439:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4531943-4532077:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4534082-4534270:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4535500-4535608:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4537291-4537391:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4539460-4539581:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4545109-4545229:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4546534-4546663:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4548292-4548396:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4550515-4550693:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4552326-4552435:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4554247-4554352:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4556162-4556334:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4562667-4562914:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4565728-4565837:1:exon

LOC116978221
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116978221
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4568311..4604534)
location: region:4568311-4604534:-1
so has part: feature:4568311-4604534:-1:exon
subclass of: SO_0000010

116978221
type: Gene
SIO_000068: ncbigene

position:4568311:-1
position: 4568311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4604534:-1
position: 4604534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4568311-4604534:-1:exon

LOC116978221
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116978221
product: rho GTPase-activating protein 7-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_033029211.1
SIO_010081: LOC116978221
subclass of: SO_0000673
so part of: LOC116978221
location: complement(join(4568311..4570454,4573142..4573315,4575901..4576118,4576600..4576794,4579321..4579435,4581579..4581792,4584306..4584502,4588496..4588655,4591458..4591628,4594729..4596116,4597411..4597474,4599746..4599827,4601322..4601393,4604256..4604534))
location: region:4568311-4604534:-1
so has part: feature:4604256-4604534:-1:exon
so has part: feature:4601322-4601393:-1:exon
so has part: feature:4599746-4599827:-1:exon
so has part: feature:4597411-4597474:-1:exon
so has part: feature:4594729-4596116:-1:exon
so has part: feature:4591458-4591628:-1:exon
so has part: feature:4588496-4588655:-1:exon
so has part: feature:4584306-4584502:-1:exon
so has part: feature:4581579-4581792:-1:exon
so has part: feature:4579321-4579435:-1:exon
so has part: feature:4576600-4576794:-1:exon
so has part: feature:4575901-4576118:-1:exon
so has part: feature:4573142-4573315:-1:exon
so has part: feature:4568311-4570454:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4604256-4604534:-1:exon

position:4604256:-1
position: 4604256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4601322-4601393:-1:exon

position:4601322:-1
position: 4601322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4601393:-1
position: 4601393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4599746-4599827:-1:exon

position:4599746:-1
position: 4599746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4599827:-1
position: 4599827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4597411-4597474:-1:exon

position:4597411:-1
position: 4597411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4597474:-1
position: 4597474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4594729-4596116:-1:exon

position:4594729:-1
position: 4594729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4596116:-1
position: 4596116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4591458-4591628:-1:exon

position:4591458:-1
position: 4591458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4591628:-1
position: 4591628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4588496-4588655:-1:exon

position:4588496:-1
position: 4588496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4588655:-1
position: 4588655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4584306-4584502:-1:exon

position:4584306:-1
position: 4584306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4584502:-1
position: 4584502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4581579-4581792:-1:exon

position:4581579:-1
position: 4581579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4581792:-1
position: 4581792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4579321-4579435:-1:exon

position:4579321:-1
position: 4579321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4579435:-1
position: 4579435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4576600-4576794:-1:exon

position:4576600:-1
position: 4576600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4576794:-1
position: 4576794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4575901-4576118:-1:exon

position:4575901:-1
position: 4575901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4576118:-1
position: 4576118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4573142-4573315:-1:exon

position:4573142:-1
position: 4573142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4573315:-1
position: 4573315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4568311-4570454:-1:exon

position:4570454:-1
position: 4570454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116978221
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116978221
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: rho GTPase-activating protein 7-like
translation: MITKQIEAKDACDWLRAAGFPQYPQLFEALQFPVDIEVVKNDHEFLDTDAIESLCRRLKTLNKCAMMKLEIVRDRKKSDESEDEEPCAISHKWTFQQDCKRWSRVETFELFHSGSLSLPGSPCLQTMDSDEIMFAELVEIQEVSSIHSSSSSSSGGVGDTTILPKHSVQASGFDPSRTSSRCSSAKSPSADPCFSGPPSPSDFSALARDGKSSKPKAKGLLKKMEGFRLRGCGQQKKGVHPRQRPIIGHPMLQEGFGQEKLRNLNCIGLAEMEEHLLVQNLFCSSPASRSSSGSTSSQSGNSSSAVSTPSPVLRTRGRTLRQGGQFPDNVNPTLPPGGYQRDNGGPQAGGDHLLFHVPRGHEPGTFPKALQHGAAPPADTSVNWRTGSFHGYQRSGAARLSGSGWPNPPGALDNRTSIYDNLPGGRVPPGDDNGTGLGDDDDVFTELDEVVGHVNDLQGLVAKWAEKFSDDGESDSANDSTSPYPSSPKDIHLEIEKHLGRAHGETTPNVADKSAGELDAADVHFDRDSGVGSSLKLPSRRGRDCWPSEKNMNHQNLHLHIDGQSAAQLNLLQKLALLKLTALMDKYSPSSKQGWIWAVPKFIRKIKAPDFKDRVVFGVPLLLNAQRTGHALPRGVLQAMRFLRSHCLDQVGLFRKSGVKSRIQALREMNENCPDGVXYEGQSAFDVADMVKQYFRDLPEXLFTTKLSESFLHIYQYLPTDQRLPAVQSAILLLPDENREALQSLLCFLCDVVACVNENQMTPTNLAVCLAPSLFHLNTLRRESTSSRVGQRKYSLGKPDQRDLSENLAATQGLAHMIAECSQLFLVPEQWAGRNVSYSQRVHGLHDSEWHRHVKTALTNSSLGLLKEAKEKFRSWVSCCGLEHVEIAYKKMDDNHPLRLWKVSVDVEKSPGEILNRLLRDHQLWEKDLLHSKVVETLGDETEIYHHTIRSTFPHPHRDYVVLRTWQTDSQTGLCVLAATSVDAKELPLQGVQANVITSQYHIEPVGASRSKLSHICRIDTRGRTPEWYNKVFGYRCAAELLKIRDSFSASDTELRETNI
SIO_010081: LOC116978221
subclass of: SO_0000673
so part of: LOC116978221
location: complement(join(4570337..4570454,4573142..4573315,4575901..4576118,4576600..4576794,4579321..4579435,4581579..4581792,4584306..4584502,4588496..4588655,4591458..4591628,4594729..4596116,4597411..4597474,4599746..4599827,4601322..4601393,4604256..4604268))
location: region:4570337-4604268:-1
so has part: feature:4604256-4604268:-1:exon
so has part: feature:4601322-4601393:-1:exon
so has part: feature:4599746-4599827:-1:exon
so has part: feature:4597411-4597474:-1:exon
so has part: feature:4594729-4596116:-1:exon
so has part: feature:4591458-4591628:-1:exon
so has part: feature:4588496-4588655:-1:exon
so has part: feature:4584306-4584502:-1:exon
so has part: feature:4581579-4581792:-1:exon
so has part: feature:4579321-4579435:-1:exon
so has part: feature:4576600-4576794:-1:exon
so has part: feature:4575901-4576118:-1:exon
so has part: feature:4573142-4573315:-1:exon
so has part: feature:4570337-4570454:-1:exon

XP_032885102.1
type: Protein
SIO_000068: ncbiprotein

position:4570337:-1
position: 4570337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4604268:-1
position: 4604268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4604256-4604268:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4601322-4601393:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4599746-4599827:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4597411-4597474:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4594729-4596116:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4591458-4591628:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4588496-4588655:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4584306-4584502:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4581579-4581792:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4579321-4579435:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4576600-4576794:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4575901-4576118:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4573142-4573315:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4570337-4570454:-1:exon

LOC116978735
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116978735
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4699294..4709251)
location: region:4699294-4709251:-1
so has part: feature:4699294-4709251:-1:exon
subclass of: SO_0000011

116978735
type: Gene
SIO_000068: ncbigene

position:4699294:-1
position: 4699294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4709251:-1
position: 4709251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4699294-4709251:-1:exon

LOC116978735
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116978735
product: uncharacterized LOC116978735
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004413529.1
SIO_010081: LOC116978735
subclass of: SO_0000673
so part of: LOC116978735
location: complement(join(4699294..4699310,4705071..4705075,4709123..4709251))
location: region:4699294-4709251:-1
so has part: feature:4709123-4709251:-1:exon
so has part: feature:4705071-4705075:-1:exon
so has part: feature:4699294-4699310:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4709123-4709251:-1:exon

position:4709123:-1
position: 4709123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4705071-4705075:-1:exon

position:4705071:-1
position: 4705071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4705075:-1
position: 4705075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4699294-4699310:-1:exon

position:4699310:-1
position: 4699310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116978736
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116978736
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4788168..4810055
location: region:4788168-4810055:1
so has part: feature:4788168-4810055:1:exon
subclass of: SO_0000011

116978736
type: Gene
SIO_000068: ncbigene

position:4788168:1
position: 4788168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4810055:1
position: 4810055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4788168-4810055:1:exon

LOC116978736
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116978736
product: uncharacterized LOC116978736
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004413530.1
SIO_010081: LOC116978736
subclass of: SO_0000673
so part of: LOC116978736
location: join(4788168..4788178,4792035..4792042,4809953..4810055)
location: region:4788168-4810055:1
so has part: feature:4788168-4788178:1:exon
so has part: feature:4792035-4792042:1:exon
so has part: feature:4809953-4810055:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4788168-4788178:1:exon

position:4788178:1
position: 4788178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4792035-4792042:1:exon

position:4792035:1
position: 4792035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4792042:1
position: 4792042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4809953-4810055:1:exon

position:4809953:1
position: 4809953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

sgcd
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: sgcd
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4846860..5042846)
location: region:4846860-5042846:-1
so has part: feature:4846860-5042846:-1:exon
subclass of: SO_0000010

116978223
type: Gene
SIO_000068: ncbigene

position:4846860:-1
position: 4846860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5042846:-1
position: 5042846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4846860-5042846:-1:exon

sgcd
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: sgcd
product: sarcoglycan delta, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_033029213.1
SIO_010081: sgcd
subclass of: SO_0000673
so part of: sgcd
location: complement(join(4846860..4847752,4852165..4852288,4867843..4867915,4878303..4878422,4881970..4882057,4901772..4901873,4938050..4938238,5042768..5042846))
location: region:4846860-5042846:-1
so has part: feature:5042768-5042846:-1:exon
so has part: feature:4938050-4938238:-1:exon
so has part: feature:4901772-4901873:-1:exon
so has part: feature:4881970-4882057:-1:exon
so has part: feature:4878303-4878422:-1:exon
so has part: feature:4867843-4867915:-1:exon
so has part: feature:4852165-4852288:-1:exon
so has part: feature:4846860-4847752:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5042768-5042846:-1:exon

position:5042768:-1
position: 5042768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4938050-4938238:-1:exon

position:4938050:-1
position: 4938050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4938238:-1
position: 4938238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4901772-4901873:-1:exon

position:4901772:-1
position: 4901772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4901873:-1
position: 4901873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4881970-4882057:-1:exon

position:4881970:-1
position: 4881970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4882057:-1
position: 4882057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4878303-4878422:-1:exon

position:4878303:-1
position: 4878303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4878422:-1
position: 4878422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4867843-4867915:-1:exon

position:4867843:-1
position: 4867843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4867915:-1
position: 4867915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4852165-4852288:-1:exon

position:4852165:-1
position: 4852165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4852288:-1
position: 4852288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4846860-4847752:-1:exon

position:4847752:-1
position: 4847752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

sgcd
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: sgcd
product: sarcoglycan delta, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_033029215.1
SIO_010081: sgcd
subclass of: SO_0000673
so part of: sgcd
location: complement(join(4846860..4847752,4852165..4852288,4867843..4867915,4878303..4878422,4881970..4882057,4901772..4901873,4938050..4938238,4957213..4957340))
location: region:4846860-4957340:-1
so has part: feature:4957213-4957340:-1:exon
so has part: feature:4938050-4938238:-1:exon
so has part: feature:4901772-4901873:-1:exon
so has part: feature:4881970-4882057:-1:exon
so has part: feature:4878303-4878422:-1:exon
so has part: feature:4867843-4867915:-1:exon
so has part: feature:4852165-4852288:-1:exon
so has part: feature:4846860-4847752:-1:exon

position:4957340:-1
position: 4957340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4957213-4957340:-1:exon

position:4957213:-1
position: 4957213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4938050-4938238:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4901772-4901873:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4881970-4882057:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4878303-4878422:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4867843-4867915:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4852165-4852288:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4846860-4847752:-1:exon

sgcd
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: sgcd
product: sarcoglycan delta, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_033029214.1
SIO_010081: sgcd
subclass of: SO_0000673
so part of: sgcd
location: complement(join(4846860..4847752,4852165..4852288,4867843..4867915,4878303..4878422,4881970..4882057,4901772..4901873,4938050..4938238,4957130..4957256))
location: region:4846860-4957256:-1
so has part: feature:4957130-4957256:-1:exon
so has part: feature:4938050-4938238:-1:exon
so has part: feature:4901772-4901873:-1:exon
so has part: feature:4881970-4882057:-1:exon
so has part: feature:4878303-4878422:-1:exon
so has part: feature:4867843-4867915:-1:exon
so has part: feature:4852165-4852288:-1:exon
so has part: feature:4846860-4847752:-1:exon

position:4957256:-1
position: 4957256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4957130-4957256:-1:exon

position:4957130:-1
position: 4957130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4938050-4938238:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4901772-4901873:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4881970-4882057:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4878303-4878422:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4867843-4867915:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4852165-4852288:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4846860-4847752:-1:exon

sgcd
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: sgcd
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: delta-sarcoglycan isoform X1
translation: MPKMVQEQYLTQRNDIHTSERQYVYKVGIYGWRKRCLYLFVLLLMTLLLVNLALTIWILKVMNFTKDGMGQLRITDKGLRLEGASEFLQPLYAKEIRSQADSSLYLQSSQNVTVSIRNSEDQIVTQLNTGSEAVEARGRRFEVNSNTGKLLFSAEESEVVVGADRLRVLGAEGAVFERSIETPQIRAEPFKELRLESPTRSLILEAPKGVVIEAEAGNMEAICQTELKLQSEDGEIILEARDIRLPGLPMGSYSSTPSARQNTFEVCVCPNGKLFLSQAGVGSTCQINSSACL
SIO_010081: sgcd
subclass of: SO_0000673
so part of: sgcd
location: complement(join(4847576..4847752,4852165..4852288,4867843..4867915,4878303..4878422,4881970..4882057,4901772..4901873,4938050..4938238,5042768..5042776))
location: region:4847576-5042776:-1
so has part: feature:5042768-5042776:-1:exon
so has part: feature:4938050-4938238:-1:exon
so has part: feature:4901772-4901873:-1:exon
so has part: feature:4881970-4882057:-1:exon
so has part: feature:4878303-4878422:-1:exon
so has part: feature:4867843-4867915:-1:exon
so has part: feature:4852165-4852288:-1:exon
so has part: feature:4847576-4847752:-1:exon

XP_032885104.1
type: Protein
SIO_000068: ncbiprotein

position:4847576:-1
position: 4847576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5042776:-1
position: 5042776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5042768-5042776:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4938050-4938238:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4901772-4901873:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4881970-4882057:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4878303-4878422:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4867843-4867915:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4852165-4852288:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4847576-4847752:-1:exon

sgcd
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: sgcd
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: delta-sarcoglycan isoform X2
translation: MVQEQYLTQRNDIHTSERQYVYKVGIYGWRKRCLYLFVLLLMTLLLVNLALTIWILKVMNFTKDGMGQLRITDKGLRLEGASEFLQPLYAKEIRSQADSSLYLQSSQNVTVSIRNSEDQIVTQLNTGSEAVEARGRRFEVNSNTGKLLFSAEESEVVVGADRLRVLGAEGAVFERSIETPQIRAEPFKELRLESPTRSLILEAPKGVVIEAEAGNMEAICQTELKLQSEDGEIILEARDIRLPGLPMGSYSSTPSARQNTFEVCVCPNGKLFLSQAGVGSTCQINSSACL
SIO_010081: sgcd
subclass of: SO_0000673
so part of: sgcd
location: complement(join(4847576..4847752,4852165..4852288,4867843..4867915,4878303..4878422,4881970..4882057,4901772..4901873,4938050..4938238))
location: region:4847576-4938238:-1
so has part: feature:4938050-4938238:-1:exon
so has part: feature:4901772-4901873:-1:exon
so has part: feature:4881970-4882057:-1:exon
so has part: feature:4878303-4878422:-1:exon
so has part: feature:4867843-4867915:-1:exon
so has part: feature:4852165-4852288:-1:exon
so has part: feature:4847576-4847752:-1:exon

XP_032885105.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4938050-4938238:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4901772-4901873:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4881970-4882057:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4878303-4878422:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4867843-4867915:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4852165-4852288:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4847576-4847752:-1:exon

sgcd
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: sgcd
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: delta-sarcoglycan isoform X2
translation: MVQEQYLTQRNDIHTSERQYVYKVGIYGWRKRCLYLFVLLLMTLLLVNLALTIWILKVMNFTKDGMGQLRITDKGLRLEGASEFLQPLYAKEIRSQADSSLYLQSSQNVTVSIRNSEDQIVTQLNTGSEAVEARGRRFEVNSNTGKLLFSAEESEVVVGADRLRVLGAEGAVFERSIETPQIRAEPFKELRLESPTRSLILEAPKGVVIEAEAGNMEAICQTELKLQSEDGEIILEARDIRLPGLPMGSYSSTPSARQNTFEVCVCPNGKLFLSQAGVGSTCQINSSACL
SIO_010081: sgcd
subclass of: SO_0000673
so part of: sgcd
location: complement(join(4847576..4847752,4852165..4852288,4867843..4867915,4878303..4878422,4881970..4882057,4901772..4901873,4938050..4938238))
location: region:4847576-4938238:-1
so has part: feature:4938050-4938238:-1:exon
so has part: feature:4901772-4901873:-1:exon
so has part: feature:4881970-4882057:-1:exon
so has part: feature:4878303-4878422:-1:exon
so has part: feature:4867843-4867915:-1:exon
so has part: feature:4852165-4852288:-1:exon
so has part: feature:4847576-4847752:-1:exon

XP_032885106.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4938050-4938238:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4901772-4901873:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4881970-4882057:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4878303-4878422:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4867843-4867915:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4852165-4852288:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4847576-4847752:-1:exon

LOC116978737
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116978737
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5249572..5269115)
location: region:5249572-5269115:-1
so has part: feature:5249572-5269115:-1:exon
subclass of: SO_0000011

116978737
type: Gene
SIO_000068: ncbigene

position:5249572:-1
position: 5249572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5269115:-1
position: 5269115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5249572-5269115:-1:exon

LOC116978737
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116978737
product: uncharacterized LOC116978737
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_004413531.1
SIO_010081: LOC116978737
subclass of: SO_0000673
so part of: LOC116978737
location: complement(join(5249572..5249668,5261785..5261788,5269104..5269115))
location: region:5249572-5269115:-1
so has part: feature:5269104-5269115:-1:exon
so has part: feature:5261785-5261788:-1:exon
so has part: feature:5249572-5249668:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5269104-5269115:-1:exon

position:5269104:-1
position: 5269104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5261785-5261788:-1:exon

position:5261785:-1
position: 5261785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5261788:-1
position: 5261788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5249572-5249668:-1:exon

position:5249668:-1
position: 5249668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

zcchc10
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: zcchc10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5352015..5368746
location: region:5352015-5368746:1
so has part: feature:5352015-5368746:1:exon
subclass of: SO_0000010

116978226
type: Gene
SIO_000068: ncbigene

position:5352015:1
position: 5352015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5368746:1
position: 5368746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5352015-5368746:1:exon

zcchc10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: zcchc10
product: zinc finger CCHC-type containing 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_033029221.1
SIO_010081: zcchc10
subclass of: SO_0000673
so part of: zcchc10
location: join(5352015..5352070,5358231..5358392,5361785..5361823,5367932..5368746)
location: region:5352015-5368746:1
so has part: feature:5352015-5352070:1:exon
so has part: feature:5358231-5358392:1:exon
so has part: feature:5361785-5361823:1:exon
so has part: feature:5367932-5368746:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5352015-5352070:1:exon

position:5352070:1
position: 5352070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5358231-5358392:1:exon

position:5358231:1
position: 5358231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5358392:1
position: 5358392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5361785-5361823:1:exon

position:5361785:1
position: 5361785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5361823:1
position: 5361823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5367932-5368746:1:exon

position:5367932:1
position: 5367932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

zcchc10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: zcchc10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger CCHC domain-containing protein 10
translation: MATPMHRLIARRQAEANKQHVRCQKCLEYGHWTYECTGKRKYLHRPSRTAQLKKTLKDKQNKLALPTSGQGNTEKKIKKKRSQSISSSSSSTSTDSSSDSETSSNSSTSGSSSSDEDSSSTDSSSSSSTSSSSETSSSDSDSDSSSSSSMSSSDEEPPKKRLKS
SIO_010081: zcchc10
subclass of: SO_0000673
so part of: zcchc10
location: join(5352030..5352070,5358231..5358392,5361785..5361823,5367932..5368184)
location: region:5352030-5368184:1
so has part: feature:5352030-5352070:1:exon
so has part: feature:5358231-5358392:1:exon
so has part: feature:5361785-5361823:1:exon
so has part: feature:5367932-5368184:1:exon

XP_032885112.1
type: Protein
SIO_000068: ncbiprotein

position:5352030:1
position: 5352030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5368184:1
position: 5368184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5352030-5352070:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5358231-5358392:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5361785-5361823:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5367932-5368184:1:exon

aff4
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: aff4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5381028..5468124
location: region:5381028-5468124:1
so has part: feature:5381028-5468124:1:exon
subclass of: SO_0000010

116978225
type: Gene
SIO_000068: ncbigene

position:5381028:1
position: 5381028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5468124:1
position: 5468124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5381028-5468124:1:exon

aff4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: aff4
product: AF4/FMR2 family member 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_033029216.1
SIO_010081: aff4
subclass of: SO_0000673
so part of: aff4
location: join(5381028..5381407,5412540..5412669,5414851..5415681,5419650..5419694,5422330..5422416,5423403..5423439,5425156..5425207,5428573..5428599,5432165..5432219,5432860..5432897,5433411..5433570,5437143..5438072,5444631..5444719,5446893..5447151,5450072..5450175,5455540..5455603,5455966..5456102,5456267..5456338,5458924..5459017,5459105..5459148,5462371..5462594,5463784..5468124)
location: region:5381028-5468124:1
so has part: feature:5381028-5381407:1:exon
so has part: feature:5412540-5412669:1:exon
so has part: feature:5414851-5415681:1:exon
so has part: feature:5419650-5419694:1:exon
so has part: feature:5422330-5422416:1:exon
so has part: feature:5423403-5423439:1:exon
so has part: feature:5425156-5425207:1:exon
so has part: feature:5428573-5428599:1:exon
so has part: feature:5432165-5432219:1:exon
so has part: feature:5432860-5432897:1:exon
so has part: feature:5433411-5433570:1:exon
so has part: feature:5437143-5438072:1:exon
so has part: feature:5444631-5444719:1:exon
so has part: feature:5446893-5447151:1:exon
so has part: feature:5450072-5450175:1:exon
so has part: feature:5455540-5455603:1:exon
so has part: feature:5455966-5456102:1:exon
so has part: feature:5456267-5456338:1:exon
so has part: feature:5458924-5459017:1:exon
so has part: feature:5459105-5459148:1:exon
so has part: feature:5462371-5462594:1:exon
so has part: feature:5463784-5468124:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5381028-5381407:1:exon

position:5381407:1
position: 5381407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5412540-5412669:1:exon

position:5412540:1
position: 5412540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5412669:1
position: 5412669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5414851-5415681:1:exon

position:5414851:1
position: 5414851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5415681:1
position: 5415681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5419650-5419694:1:exon

position:5419650:1
position: 5419650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5419694:1
position: 5419694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5422330-5422416:1:exon

position:5422330:1
position: 5422330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5422416:1
position: 5422416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5423403-5423439:1:exon

position:5423403:1
position: 5423403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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aff4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: aff4
product: AF4/FMR2 family member 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_033029217.1
SIO_010081: aff4
subclass of: SO_0000673
so part of: aff4
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location: region:5381028-5468124:1
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SIO_000300: 22
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aff4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: aff4
product: AF4/FMR2 family member 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_033029219.1
SIO_010081: aff4
subclass of: SO_0000673
so part of: aff4
location: join(5381028..5381407,5412540..5412669,5414851..5415681,5419650..5419694,5422330..5422416,5432860..5432897,5433411..5433570,5437143..5438072,5444631..5444719,5446893..5447151,5450072..5450175,5455540..5455603,5455966..5456102,5456267..5456338,5458924..5459017,5459105..5459148,5462371..5462594,5463784..5468124)
location: region:5381028-5468124:1
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urn:…
SIO_000300: 1
SIO_000628: feature:5381028-5381407:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5412540-5412669:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5414851-5415681:1:exon

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SIO_000300: 4
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SIO_000300: 5
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SIO_000300: 6
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SIO_000300: 7
SIO_000628: feature:5433411-5433570:1:exon

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SIO_000628: feature:5437143-5438072:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5444631-5444719:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5446893-5447151:1:exon

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SIO_000300: 15
SIO_000628: feature:5458924-5459017:1:exon

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SIO_000300: 16
SIO_000628: feature:5459105-5459148:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5462371-5462594:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5463784-5468124:1:exon

aff4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: aff4
product: AF4/FMR2 family member 4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_033029220.1
SIO_010081: aff4
subclass of: SO_0000673
so part of: aff4
location: join(5381028..5381407,5412540..5412669,5414851..5415681,5419650..5419694,5422330..5422416,5432860..5432897,5433414..5433570,5437143..5438072,5444631..5444719,5446893..5447151,5450072..5450175,5455540..5455603,5455966..5456102,5456267..5456338,5458924..5459017,5459105..5459148,5462371..5462594,5463784..5468124)
location: region:5381028-5468124:1
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urn:…
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urn:…
SIO_000300: 18
SIO_000628: feature:5463784-5468124:1:exon

aff4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: aff4
product: AF4/FMR2 family member 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_033029218.1
SIO_010081: aff4
subclass of: SO_0000673
so part of: aff4
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position:5412541:1
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urn:…
SIO_000300: 21
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aff4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: aff4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AF4/FMR2 family member 4 isoform X1
translation: MNREDRNVQRMKERERRNQGIQQNEETFPGNSPLFAEPYKVQGRTEDKLSSKIQSMLGNYDEMKDYIGDRPIQKFIDIPKGTVSSTTDEKSDQAFFTEHRHSASHQSSKWTPVGPATSAPSTSSQSQKRSSSGLPSSHGSGQRHGGSSSNTGSGSSQRHDRDSHSSNRKRSGQHGSEHSKSHSVSPAKPPAVSSSLSSSHSRSQGSDHHSKERHRSKSPRDLDATWDSPSRVHTFPASGQHTSQSFTPALMSKPSSMIQKPTAYVRPMDGQDQAPNESVEPKIPSEHYGSQPHGSSLAEMKSGNKVLLSKLKIPSQSVESSVSGDASCVDEILKEMTHSWPPPLTAIHTPCKAEPSKFPFPTKESQHVNYSVQGQKRYNSAPKSTSSHPQTKCSESDQTPSGVLEEDLKLSSSEDSDADQDSGKQPARVTPEGSSEPAQQNNECLEPPRADSSSHSGSESSSGSDSESESSSSDSEANEPAPSSPDPDPPPSSSKWQLDNWLNKVSSHKVSPASSVDSHIQSSQGRSYKKESRDQGAAYEDPGGSKDATAVTPGRDSRNTQKGSETRGRQKSPAQSDGSTQRKTVGKKQPKKAERPTVTEEPRGGLKVESEPTSNRATLNPANHHKAATKGSRKPSTKRESKSSARAMTERKHKIVTKTAQKSKEHVQTDLSSSDSEQSETLPPVSQTPKYSENNRTPVHKPCIDGEDTIFQQRLFSPMEEKELLSPLSDVDDKYRNITSLIVRIDLSLLSRKPESPHKETKQPQMDKEISSDKRMHDTPKQSAEKKSNKVKRKHKNDAENESSDSKKSKTEERTNSNHKPSISREGSSKPVGEREKLPPPSPSASVGQKTPKTEHKHPSRRRTANPTSTSKSKNGNPKQTSSSSNSSKSNSSSSKHKKTDDKTSSRPKENRSQEKIQVSSSSALQSSAPSGDGLKSRRPKLSFDDRLHSADHYLQEAKKLKHNADALSDRFEKAVYYLDAVVSFIECGNALERNSQKAKSPFPMYAETVELIKYTMKLKNHMAPDATAADKKLAVLCLRCQSLLYMRLFKLKKDSALKYSKTLTEHLKNSYSSTQAQSPGVGSKAAGTPSPVSPKVSPGNTGTYSSGSSTSSSSSSASVTIPQRIHQMAASYVQVTSNFLFATEVWDQADQLGKENKDFFVELDKAMHPLVFNSSSMTDLVRYSRQGLHWLRLDANLSP
SIO_010081: aff4
subclass of: SO_0000673
so part of: aff4
location: join(5412544..5412669,5414851..5415681,5419650..5419694,5422330..5422416,5423403..5423439,5425156..5425207,5428573..5428599,5432165..5432219,5432860..5432897,5433411..5433570,5437143..5438072,5444631..5444719,5446893..5447151,5450072..5450175,5455540..5455603,5455966..5456102,5456267..5456338,5458924..5459017,5459105..5459148,5462371..5462594,5463784..5463911)
location: region:5412544-5463911:1
so has part: feature:5412544-5412669:1:exon
so has part: feature:5414851-5415681:1:exon
so has part: feature:5419650-5419694:1:exon
so has part: feature:5422330-5422416:1:exon
so has part: feature:5423403-5423439:1:exon
so has part: feature:5425156-5425207:1:exon
so has part: feature:5428573-5428599:1:exon
so has part: feature:5432165-5432219:1:exon
so has part: feature:5432860-5432897:1:exon
so has part: feature:5433411-5433570:1:exon
so has part: feature:5437143-5438072:1:exon
so has part: feature:5444631-5444719:1:exon
so has part: feature:5446893-5447151:1:exon
so has part: feature:5450072-5450175:1:exon
so has part: feature:5455540-5455603:1:exon
so has part: feature:5455966-5456102:1:exon
so has part: feature:5456267-5456338:1:exon
so has part: feature:5458924-5459017:1:exon
so has part: feature:5459105-5459148:1:exon
so has part: feature:5462371-5462594:1:exon
so has part: feature:5463784-5463911:1:exon

XP_032885107.1
type: Protein
SIO_000068: ncbiprotein

position:5412544:1
position: 5412544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5463911:1
position: 5463911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5412544-5412669:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5414851-5415681:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5419650-5419694:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5422330-5422416:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5423403-5423439:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5425156-5425207:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5428573-5428599:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5432165-5432219:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5432860-5432897:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5433411-5433570:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5437143-5438072:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5444631-5444719:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5446893-5447151:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5450072-5450175:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5455540-5455603:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5455966-5456102:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5456267-5456338:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5458924-5459017:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5459105-5459148:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5462371-5462594:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5463784-5463911:1:exon

aff4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: aff4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AF4/FMR2 family member 4 isoform X2
translation: MNREDRNVQRMKERERRNQGIQQNEETFPGNSPLFAEPYKVQGRTEDKLSSKIQSMLGNYDEMKDYIGDRPIQKFIDIPKGTVSSTTDEKSDQAFFTEHRHSASHQSSKWTPVGPATSAPSTSSQSQKRSSSGLPSSHGSGQRHGGSSSNTGSGSSQRHDRDSHSSNRKRSGQHGSEHSKSHSVSPAKPPAVSSSLSSSHSRSQGSDHHSKERHRSKSPRDLDATWDSPSRVHTFPASGQHTSQSFTPALMSKPSSMIQKPTAYVRPMDGQDQAPNESVEPKIPSEHYGSQPHGSSLAEMKSGNKVLLSKLKIPSQSVESSVSGDASCVDEILKEMTHSWPPPLTAIHTPCKAEPSKFPFPTKESQHVNYSVQGQKRYNSAPKSTSSHPQTKCSESDQTPSGVLEEDLKLSSSEDSDADQDSGKQPARVTPEGSEPAQQNNECLEPPRADSSSHSGSESSSGSDSESESSSSDSEANEPAPSSPDPDPPPSSSKWQLDNWLNKVSSHKVSPASSVDSHIQSSQGRSYKKESRDQGAAYEDPGGSKDATAVTPGRDSRNTQKGSETRGRQKSPAQSDGSTQRKTVGKKQPKKAERPTVTEEPRGGLKVESEPTSNRATLNPANHHKAATKGSRKPSTKRESKSSARAMTERKHKIVTKTAQKSKEHVQTDLSSSDSEQSETLPPVSQTPKYSENNRTPVHKPCIDGEDTIFQQRLFSPMEEKELLSPLSDVDDKYRNITSLIVRIDLSLLSRKPESPHKETKQPQMDKEISSDKRMHDTPKQSAEKKSNKVKRKHKNDAENESSDSKKSKTEERTNSNHKPSISREGSSKPVGEREKLPPPSPSASVGQKTPKTEHKHPSRRRTANPTSTSKSKNGNPKQTSSSSNSSKSNSSSSKHKKTDDKTSSRPKENRSQEKIQVSSSSALQSSAPSGDGLKSRRPKLSFDDRLHSADHYLQEAKKLKHNADALSDRFEKAVYYLDAVVSFIECGNALERNSQKAKSPFPMYAETVELIKYTMKLKNHMAPDATAADKKLAVLCLRCQSLLYMRLFKLKKDSALKYSKTLTEHLKNSYSSTQAQSPGVGSKAAGTPSPVSPKVSPGNTGTYSSGSSTSSSSSSASVTIPQRIHQMAASYVQVTSNFLFATEVWDQADQLGKENKDFFVELDKAMHPLVFNSSSMTDLVRYSRQGLHWLRLDANLSP
SIO_010081: aff4
subclass of: SO_0000673
so part of: aff4
location: join(5412544..5412669,5414851..5415681,5419650..5419694,5422330..5422416,5423403..5423439,5425156..5425207,5428573..5428599,5432165..5432219,5432860..5432897,5433414..5433570,5437143..5438072,5444631..5444719,5446893..5447151,5450072..5450175,5455540..5455603,5455966..5456102,5456267..5456338,5458924..5459017,5459105..5459148,5462371..5462594,5463784..5463911)
location: region:5412544-5463911:1
so has part: feature:5412544-5412669:1:exon
so has part: feature:5414851-5415681:1:exon
so has part: feature:5419650-5419694:1:exon
so has part: feature:5422330-5422416:1:exon
so has part: feature:5423403-5423439:1:exon
so has part: feature:5425156-5425207:1:exon
so has part: feature:5428573-5428599:1:exon
so has part: feature:5432165-5432219:1:exon
so has part: feature:5432860-5432897:1:exon
so has part: feature:5433414-5433570:1:exon
so has part: feature:5437143-5438072:1:exon
so has part: feature:5444631-5444719:1:exon
so has part: feature:5446893-5447151:1:exon
so has part: feature:5450072-5450175:1:exon
so has part: feature:5455540-5455603:1:exon
so has part: feature:5455966-5456102:1:exon
so has part: feature:5456267-5456338:1:exon
so has part: feature:5458924-5459017:1:exon
so has part: feature:5459105-5459148:1:exon
so has part: feature:5462371-5462594:1:exon
so has part: feature:5463784-5463911:1:exon

XP_032885108.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5412544-5412669:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5414851-5415681:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5419650-5419694:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5422330-5422416:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5423403-5423439:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5425156-5425207:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5428573-5428599:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5432165-5432219:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5432860-5432897:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5433414-5433570:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5437143-5438072:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5444631-5444719:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5446893-5447151:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5450072-5450175:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5455540-5455603:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5455966-5456102:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5456267-5456338:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5458924-5459017:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5459105-5459148:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5462371-5462594:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5463784-5463911:1:exon

aff4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: aff4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AF4/FMR2 family member 4 isoform X4
translation: MNREDRNVQRMKERERRNQGIQQNEETFPGNSPLFAEPYKVQGRTEDKLSSKIQSMLGNYDEMKDYIGDRPIQKFIDIPKGTVSSTTDEKSDQAFFTEHRHSASHQSSKWTPVGPATSAPSTSSQSQKRSSSGLPSSHGSGQRHGGSSSNTGSGSSQRHDRDSHSSNRKRSGQHGSEHSKSHSVSPAKPPAVSSSLSSSHSRSQGSDHHSKERHRSKSPRDLDATWDSPSRVHTFPASGQHTSQSFTPALMSKPSSMIQKPTAYVRPMDGQDQAPNESVEPKIPSEHYGSQPHGSSLAEMKSGNKVLLSKLKIPSQSVESSVSGDASCVDEILKEMTHSWPPPLTAIHTPCKAEPSKFPFPTKDSGKQPARVTPEGSSEPAQQNNECLEPPRADSSSHSGSESSSGSDSESESSSSDSEANEPAPSSPDPDPPPSSSKWQLDNWLNKVSSHKVSPASSVDSHIQSSQGRSYKKESRDQGAAYEDPGGSKDATAVTPGRDSRNTQKGSETRGRQKSPAQSDGSTQRKTVGKKQPKKAERPTVTEEPRGGLKVESEPTSNRATLNPANHHKAATKGSRKPSTKRESKSSARAMTERKHKIVTKTAQKSKEHVQTDLSSSDSEQSETLPPVSQTPKYSENNRTPVHKPCIDGEDTIFQQRLFSPMEEKELLSPLSDVDDKYRNITSLIVRIDLSLLSRKPESPHKETKQPQMDKEISSDKRMHDTPKQSAEKKSNKVKRKHKNDAENESSDSKKSKTEERTNSNHKPSISREGSSKPVGEREKLPPPSPSASVGQKTPKTEHKHPSRRRTANPTSTSKSKNGNPKQTSSSSNSSKSNSSSSKHKKTDDKTSSRPKENRSQEKIQVSSSSALQSSAPSGDGLKSRRPKLSFDDRLHSADHYLQEAKKLKHNADALSDRFEKAVYYLDAVVSFIECGNALERNSQKAKSPFPMYAETVELIKYTMKLKNHMAPDATAADKKLAVLCLRCQSLLYMRLFKLKKDSALKYSKTLTEHLKNSYSSTQAQSPGVGSKAAGTPSPVSPKVSPGNTGTYSSGSSTSSSSSSASVTIPQRIHQMAASYVQVTSNFLFATEVWDQADQLGKENKDFFVELDKAMHPLVFNSSSMTDLVRYSRQGLHWLRLDANLSP
SIO_010081: aff4
subclass of: SO_0000673
so part of: aff4
location: join(5412544..5412669,5414851..5415681,5419650..5419694,5422330..5422416,5432860..5432897,5433411..5433570,5437143..5438072,5444631..5444719,5446893..5447151,5450072..5450175,5455540..5455603,5455966..5456102,5456267..5456338,5458924..5459017,5459105..5459148,5462371..5462594,5463784..5463911)
location: region:5412544-5463911:1
so has part: feature:5412544-5412669:1:exon
so has part: feature:5414851-5415681:1:exon
so has part: feature:5419650-5419694:1:exon
so has part: feature:5422330-5422416:1:exon
so has part: feature:5432860-5432897:1:exon
so has part: feature:5433411-5433570:1:exon
so has part: feature:5437143-5438072:1:exon
so has part: feature:5444631-5444719:1:exon
so has part: feature:5446893-5447151:1:exon
so has part: feature:5450072-5450175:1:exon
so has part: feature:5455540-5455603:1:exon
so has part: feature:5455966-5456102:1:exon
so has part: feature:5456267-5456338:1:exon
so has part: feature:5458924-5459017:1:exon
so has part: feature:5459105-5459148:1:exon
so has part: feature:5462371-5462594:1:exon
so has part: feature:5463784-5463911:1:exon

XP_032885110.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5412544-5412669:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5414851-5415681:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5419650-5419694:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5422330-5422416:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5432860-5432897:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5433411-5433570:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5437143-5438072:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5444631-5444719:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5446893-5447151:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5450072-5450175:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5455540-5455603:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5455966-5456102:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5456267-5456338:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5458924-5459017:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5459105-5459148:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5462371-5462594:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5463784-5463911:1:exon

aff4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: aff4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AF4/FMR2 family member 4 isoform X5
translation: MNREDRNVQRMKERERRNQGIQQNEETFPGNSPLFAEPYKVQGRTEDKLSSKIQSMLGNYDEMKDYIGDRPIQKFIDIPKGTVSSTTDEKSDQAFFTEHRHSASHQSSKWTPVGPATSAPSTSSQSQKRSSSGLPSSHGSGQRHGGSSSNTGSGSSQRHDRDSHSSNRKRSGQHGSEHSKSHSVSPAKPPAVSSSLSSSHSRSQGSDHHSKERHRSKSPRDLDATWDSPSRVHTFPASGQHTSQSFTPALMSKPSSMIQKPTAYVRPMDGQDQAPNESVEPKIPSEHYGSQPHGSSLAEMKSGNKVLLSKLKIPSQSVESSVSGDASCVDEILKEMTHSWPPPLTAIHTPCKAEPSKFPFPTKDSGKQPARVTPEGSEPAQQNNECLEPPRADSSSHSGSESSSGSDSESESSSSDSEANEPAPSSPDPDPPPSSSKWQLDNWLNKVSSHKVSPASSVDSHIQSSQGRSYKKESRDQGAAYEDPGGSKDATAVTPGRDSRNTQKGSETRGRQKSPAQSDGSTQRKTVGKKQPKKAERPTVTEEPRGGLKVESEPTSNRATLNPANHHKAATKGSRKPSTKRESKSSARAMTERKHKIVTKTAQKSKEHVQTDLSSSDSEQSETLPPVSQTPKYSENNRTPVHKPCIDGEDTIFQQRLFSPMEEKELLSPLSDVDDKYRNITSLIVRIDLSLLSRKPESPHKETKQPQMDKEISSDKRMHDTPKQSAEKKSNKVKRKHKNDAENESSDSKKSKTEERTNSNHKPSISREGSSKPVGEREKLPPPSPSASVGQKTPKTEHKHPSRRRTANPTSTSKSKNGNPKQTSSSSNSSKSNSSSSKHKKTDDKTSSRPKENRSQEKIQVSSSSALQSSAPSGDGLKSRRPKLSFDDRLHSADHYLQEAKKLKHNADALSDRFEKAVYYLDAVVSFIECGNALERNSQKAKSPFPMYAETVELIKYTMKLKNHMAPDATAADKKLAVLCLRCQSLLYMRLFKLKKDSALKYSKTLTEHLKNSYSSTQAQSPGVGSKAAGTPSPVSPKVSPGNTGTYSSGSSTSSSSSSASVTIPQRIHQMAASYVQVTSNFLFATEVWDQADQLGKENKDFFVELDKAMHPLVFNSSSMTDLVRYSRQGLHWLRLDANLSP
SIO_010081: aff4
subclass of: SO_0000673
so part of: aff4
location: join(5412544..5412669,5414851..5415681,5419650..5419694,5422330..5422416,5432860..5432897,5433414..5433570,5437143..5438072,5444631..5444719,5446893..5447151,5450072..5450175,5455540..5455603,5455966..5456102,5456267..5456338,5458924..5459017,5459105..5459148,5462371..5462594,5463784..5463911)
location: region:5412544-5463911:1
so has part: feature:5412544-5412669:1:exon
so has part: feature:5414851-5415681:1:exon
so has part: feature:5419650-5419694:1:exon
so has part: feature:5422330-5422416:1:exon
so has part: feature:5432860-5432897:1:exon
so has part: feature:5433414-5433570:1:exon
so has part: feature:5437143-5438072:1:exon
so has part: feature:5444631-5444719:1:exon
so has part: feature:5446893-5447151:1:exon
so has part: feature:5450072-5450175:1:exon
so has part: feature:5455540-5455603:1:exon
so has part: feature:5455966-5456102:1:exon
so has part: feature:5456267-5456338:1:exon
so has part: feature:5458924-5459017:1:exon
so has part: feature:5459105-5459148:1:exon
so has part: feature:5462371-5462594:1:exon
so has part: feature:5463784-5463911:1:exon

XP_032885111.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5412544-5412669:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5414851-5415681:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5419650-5419694:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5422330-5422416:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5432860-5432897:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5433414-5433570:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5437143-5438072:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5444631-5444719:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5446893-5447151:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5450072-5450175:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5455540-5455603:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5455966-5456102:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5456267-5456338:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5458924-5459017:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5459105-5459148:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5462371-5462594:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5463784-5463911:1:exon

aff4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: aff4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AF4/FMR2 family member 4 isoform X3
translation: MLGNYDEMKDYIGDRPIQKFIDIPKGTVSSTTDEKSDQAFFTEHRHSASHQSSKWTPVGPATSAPSTSSQSQKRSSSGLPSSHGSGQRHGGSSSNTGSGSSQRHDRDSHSSNRKRSGQHGSEHSKSHSVSPAKPPAVSSSLSSSHSRSQGSDHHSKERHRSKSPRDLDATWDSPSRVHTFPASGQHTSQSFTPALMSKPSSMIQKPTAYVRPMDGQDQAPNESVEPKIPSEHYGSQPHGSSLAEMKSGNKVLLSKLKIPSQSVESSVSGDASCVDEILKEMTHSWPPPLTAIHTPCKAEPSKFPFPTKESQHVNYSVQGQKRYNSAPKSTSSHPQTKCSESDQTPSGVLEEDLKLSSSEDSDADQDSGKQPARVTPEGSSEPAQQNNECLEPPRADSSSHSGSESSSGSDSESESSSSDSEANEPAPSSPDPDPPPSSSKWQLDNWLNKVSSHKVSPASSVDSHIQSSQGRSYKKESRDQGAAYEDPGGSKDATAVTPGRDSRNTQKGSETRGRQKSPAQSDGSTQRKTVGKKQPKKAERPTVTEEPRGGLKVESEPTSNRATLNPANHHKAATKGSRKPSTKRESKSSARAMTERKHKIVTKTAQKSKEHVQTDLSSSDSEQSETLPPVSQTPKYSENNRTPVHKPCIDGEDTIFQQRLFSPMEEKELLSPLSDVDDKYRNITSLIVRIDLSLLSRKPESPHKETKQPQMDKEISSDKRMHDTPKQSAEKKSNKVKRKHKNDAENESSDSKKSKTEERTNSNHKPSISREGSSKPVGEREKLPPPSPSASVGQKTPKTEHKHPSRRRTANPTSTSKSKNGNPKQTSSSSNSSKSNSSSSKHKKTDDKTSSRPKENRSQEKIQVSSSSALQSSAPSGDGLKSRRPKLSFDDRLHSADHYLQEAKKLKHNADALSDRFEKAVYYLDAVVSFIECGNALERNSQKAKSPFPMYAETVELIKYTMKLKNHMAPDATAADKKLAVLCLRCQSLLYMRLFKLKKDSALKYSKTLTEHLKNSYSSTQAQSPGVGSKAAGTPSPVSPKVSPGNTGTYSSGSSTSSSSSSASVTIPQRIHQMAASYVQVTSNFLFATEVWDQADQLGKENKDFFVELDKAMHPLVFNSSSMTDLVRYSRQGLHWLRLDANLSP
SIO_010081: aff4
subclass of: SO_0000673
so part of: aff4
location: join(5414890..5415681,5419650..5419694,5422330..5422416,5423403..5423439,5425156..5425207,5428573..5428599,5432165..5432219,5432860..5432897,5433411..5433570,5437143..5438072,5444631..5444719,5446893..5447151,5450072..5450175,5455540..5455603,5455966..5456102,5456267..5456338,5458924..5459017,5459105..5459148,5462371..5462594,5463784..5463911)
location: region:5414890-5463911:1
so has part: feature:5414890-5415681:1:exon
so has part: feature:5419650-5419694:1:exon
so has part: feature:5422330-5422416:1:exon
so has part: feature:5423403-5423439:1:exon
so has part: feature:5425156-5425207:1:exon
so has part: feature:5428573-5428599:1:exon
so has part: feature:5432165-5432219:1:exon
so has part: feature:5432860-5432897:1:exon
so has part: feature:5433411-5433570:1:exon
so has part: feature:5437143-5438072:1:exon
so has part: feature:5444631-5444719:1:exon
so has part: feature:5446893-5447151:1:exon
so has part: feature:5450072-5450175:1:exon
so has part: feature:5455540-5455603:1:exon
so has part: feature:5455966-5456102:1:exon
so has part: feature:5456267-5456338:1:exon
so has part: feature:5458924-5459017:1:exon
so has part: feature:5459105-5459148:1:exon
so has part: feature:5462371-5462594:1:exon
so has part: feature:5463784-5463911:1:exon

XP_032885109.1
type: Protein
SIO_000068: ncbiprotein

position:5414890:1
position: 5414890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5414890-5415681:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5419650-5419694:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5422330-5422416:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5423403-5423439:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5425156-5425207:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5428573-5428599:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5432165-5432219:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5432860-5432897:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5433411-5433570:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5437143-5438072:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5444631-5444719:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5446893-5447151:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5450072-5450175:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5455540-5455603:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5455966-5456102:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5456267-5456338:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5458924-5459017:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5459105-5459148:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5462371-5462594:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5463784-5463911:1:exon

LOC116978227
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116978227
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5486613..5491758)
location: region:5486613-5491758:-1
so has part: feature:5486613-5491758:-1:exon
subclass of: SO_0000010

116978227
type: Gene
SIO_000068: ncbigene

position:5486613:-1
position: 5486613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5491758:-1
position: 5491758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5486613-5491758:-1:exon

LOC116978227
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116978227
product: cytochrome b-c1 complex subunit 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_033029222.1
SIO_010081: LOC116978227
subclass of: SO_0000673
so part of: LOC116978227
location: complement(join(5486613..5486830,5490411..5490592,5491665..5491758))
location: region:5486613-5491758:-1
so has part: feature:5491665-5491758:-1:exon
so has part: feature:5490411-5490592:-1:exon
so has part: feature:5486613-5486830:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5491665-5491758:-1:exon

position:5491665:-1
position: 5491665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5490411-5490592:-1:exon

position:5490411:-1
position: 5490411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5490592:-1
position: 5490592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5486613-5486830:-1:exon

position:5486830:-1
position: 5486830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116978227
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116978227
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome b-c1 complex subunit 8
translation: MGHGFGNLARVRHIITYTLSPFEQRAFANYFSKGIPNSWRRFREHVFRVVPPFVISYMVYTWGNRAHELSMKKNPADYANDN
SIO_010081: LOC116978227
subclass of: SO_0000673
so part of: LOC116978227
location: complement(join(5486736..5486830,5490411..5490564))
location: region:5486736-5490564:-1
so has part: feature:5490411-5490564:-1:exon
so has part: feature:5486736-5486830:-1:exon

XP_032885113.1
type: Protein
SIO_000068: ncbiprotein

position:5486736:-1
position: 5486736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5490564:-1
position: 5490564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5490411-5490564:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5486736-5486830:-1:exon

gdf9
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: gdf9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5500380..5510528)
location: region:5500380-5510528:-1
so has part: feature:5500380-5510528:-1:exon
subclass of: SO_0000010

116978760
type: Gene
SIO_000068: ncbigene

position:5500380:-1
position: 5500380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5510528:-1
position: 5510528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5500380-5510528:-1:exon

gdf9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: gdf9
product: growth differentiation factor 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 66% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033030064.1
SIO_010081: gdf9
subclass of: SO_0000673
so part of: gdf9
location: complement(join(5500380..5501387,5503006..5503284,5510327..5510528))
location: region:5500380-5510528:-1
so has part: feature:5510327-5510528:-1:exon
so has part: feature:5503006-5503284:-1:exon
so has part: feature:5500380-5501387:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5510327-5510528:-1:exon

position:5510327:-1
position: 5510327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5503006-5503284:-1:exon

position:5503006:-1
position: 5503006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5503284:-1
position: 5503284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5500380-5501387:-1:exon

position:5501387:-1
position: 5501387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

gdf9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: gdf9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: growth/differentiation factor 9
translation: MPAGRKKVGRGLYNAFNAIHTQLASPNINETHTHTHPSRENGREFHIGDIKVDWLYQYHRYSRTWCTVPLTSSIALATLISFSEQEATQKYENYVLLPLLNSLTNKDYQGPSKPDIRYLKYMKRLYTVSATQDGIPKRSTEHPYNTVRLLTPRALARSTQEALEQDVLYGLSPVTSREQLLRSVLLYSDTHSASFPILCSCNVTVRNPDPTSDQMCPDALRTHTFHVQFERRKRHAWVEVDLSSFLQPYLGPQRGDLHMVFSYLCTGAGPAAATLNPNLVPPSLLLFLNDTSVRPRHSWLPLHLAGQPGPETPRKGVPGGVGLSTRPRRRRRGPKGDGEEEADSSLAAPRRLQYHDQECQLHDFRLSFSQLRWDRWIIAPHNYNPHYCKGGCPRALGHRYGSPVHTLVQNILYEKVDSTVPRPSCVPSKYNPLSVLTLESDGSIVYKEYEDMIATTCTCR
SIO_010081: gdf9
subclass of: SO_0000673
so part of: gdf9
location: complement(join(5500486..5501387,5503006..5503284,5510327..5510528))
location: region:5500486-5510528:-1
so has part: feature:5510327-5510528:-1:exon
so has part: feature:5503006-5503284:-1:exon
so has part: feature:5500486-5501387:-1:exon

XP_032885955.1
type: Protein
SIO_000068: ncbiprotein

position:5500486:-1
position: 5500486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5510327-5510528:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5503006-5503284:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5500486-5501387:-1:exon

LOC116978228
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116978228
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5548793..5574591
location: region:5548793-5574591:1
so has part: feature:5548793-5574591:1:exon
subclass of: SO_0000010

116978228
type: Gene
SIO_000068: ncbigene

position:5548793:1
position: 5548793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5574591:1
position: 5574591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5548793-5574591:1:exon

LOC116978228
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116978228
product: protein Shroom2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033029223.1
SIO_010081: LOC116978228
subclass of: SO_0000673
so part of: LOC116978228
location: join(5548793..5548956,5551165..5551229,5552885..5553544,5555879..5556370,5559252..5559387,5562962..5563234,5574115..5574591)
location: region:5548793-5574591:1
so has part: feature:5548793-5548956:1:exon
so has part: feature:5551165-5551229:1:exon
so has part: feature:5552885-5553544:1:exon
so has part: feature:5555879-5556370:1:exon
so has part: feature:5559252-5559387:1:exon
so has part: feature:5562962-5563234:1:exon
so has part: feature:5574115-5574591:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5548793-5548956:1:exon

position:5548956:1
position: 5548956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5551165-5551229:1:exon

position:5551165:1
position: 5551165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5551229:1
position: 5551229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5552885-5553544:1:exon

position:5552885:1
position: 5552885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5553544:1
position: 5553544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5555879-5556370:1:exon

position:5555879:1
position: 5555879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5556370:1
position: 5556370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5559252-5559387:1:exon

position:5559252:1
position: 5559252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5559387:1
position: 5559387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5562962-5563234:1:exon

position:5562962:1
position: 5562962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5563234:1
position: 5563234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5574115-5574591:1:exon

position:5574115:1
position: 5574115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116978228
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116978228
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Shroom2-like
translation: MLVVLGGVRGRSHPHSLPQQNEPALVDSDSVGQLNISSSPARPRVAKLETSLEVDADWKYRNRRAVNVAVGKSRYERPRGMSLDYSASSSFGKWTSRMSRSTDQLGGGQPTGQDDAVQVPPPLEMPSPERNWVKLRRGVKWQASQGAAAFQRGGGICKSRPTSSSEEPLAPTSPSPSPRSPMERARARARSLSSLPARGHEVPLERSSAVSGNCGTDHGSASDNIPVQPKPSPLRPENIFQASPSLEKTANYETGATEWPMSGENLLSTVDFVPMKPAGYDTEDDIKVRLADLASSPVCPDSIVEMTLPASMAKSEIKGGNSHPSPFKDPLNRHETSRQRPTDWTNSCVHPRMRTKSPEELRTEKLIKEIIDEDRSLAEILDPNPTTKTIMDLVEDMFQEDTLVLEACQRRGQLYSQTTEAETKRSNTKEIQLPSLLGSDTGCKAAAATVTLMQDINRERGDWPTDITDKKRELIVAIRWKLRKLHEAQAGLQEDIKVNDSLGDDIEACVGQVCNPNEMQKYESFVADLDKVMGLLLCLSSRLVRVESALSKVNESTDVEEKQSLNERHQTLSHRHEGARGLKVHQDHRERMTFRILSNYLNEIQLQHCHHFVQMRKALIIKQKEIEENLRLTEEQLGFLENSL
SIO_010081: LOC116978228
subclass of: SO_0000673
so part of: LOC116978228
location: join(5548897..5548956,5551165..5551229,5552885..5553544,5555879..5556370,5559252..5559387,5562962..5563234,5574115..5574363)
location: region:5548897-5574363:1
so has part: feature:5548897-5548956:1:exon
so has part: feature:5551165-5551229:1:exon
so has part: feature:5552885-5553544:1:exon
so has part: feature:5555879-5556370:1:exon
so has part: feature:5559252-5559387:1:exon
so has part: feature:5562962-5563234:1:exon
so has part: feature:5574115-5574363:1:exon

XP_032885114.1
type: Protein
SIO_000068: ncbiprotein

position:5548897:1
position: 5548897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5574363:1
position: 5574363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5548897-5548956:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5551165-5551229:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5552885-5553544:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5555879-5556370:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5559252-5559387:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5562962-5563234:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5574115-5574363:1:exon

sowaha
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: sowaha
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5595813..5597868)
location: region:5595813-5597868:-1
so has part: feature:5595813-5597868:-1:exon
subclass of: SO_0000010

116978230
type: Gene
SIO_000068: ncbigene

position:5595813:-1
position: 5595813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5597868:-1
position: 5597868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5595813-5597868:-1:exon

sowaha
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: sowaha
product: sosondowah ankyrin repeat domain family member A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033029225.1
SIO_010081: sowaha
subclass of: SO_0000673
so part of: sowaha
location: complement(5595813..5597868)
location: region:5595813-5597868:-1
so has part: feature:5595813-5597868:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5595813-5597868:-1:exon

sowaha
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: sowaha
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat domain-containing protein SOWAHA
translation: MEPALCQEVVTKFLVGSAGKVENSKLLFHFRNQLCQSDPQLKKEARELFKSFINKVAVVREEEGVKYVVLKKRMHHLLAGEEMPKALGKGASLGDLVEGLQEPGVRRNSAPSALSPGEGTSLNAGLWGGNSARPLPDPPSADGECPANEVGLRGQHPATSSENLPTSGDRDPASTSEKVSEDLKTDLVPPQPEQLGIPPPPPEKANPSRPDPKAEAKADVDPGLEGPKTTPVQKTKPYMYPLRLPPDSQKVSVPYSEQKKESPDTQSKNTSVVTSGNQAGAKTKRSQPAEGGSSSPYLKRASRVLKLPEDARLSDQVPLDPMEHEWIVKTALGHWTHVTGLLLKDHYLAEKKDFMSGFTAVHWAAKFGNSDMMCWIIDNTERNGLKVDINCKSHGGYTPLHIAAIHSRDNVIIELVGKYGAKTTLRDYSGKRPHHYLAKESSLVVRQMLGDPEASASESVHQKRGSKVASSILSGGNSLLGALAEDALFPDLSKSLKKPANLSKFFTAPTAHIHKKRAKTRTNFASLHEEPEEEREEVVVKRRPVTEVFF
SIO_010081: sowaha
subclass of: SO_0000673
so part of: sowaha
location: complement(5596074..5597726)
location: region:5596074-5597726:-1
so has part: feature:5596074-5597726:-1:exon

XP_032885116.1
type: Protein
SIO_000068: ncbiprotein

position:5596074:-1
position: 5596074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5597726:-1
position: 5597726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5596074-5597726:-1:exon

septin8
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: septin8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5640737..5696836
location: region:5640737-5696836:1
so has part: feature:5640737-5696836:1:exon
subclass of: SO_0000010

116978231
type: Gene
SIO_000068: ncbigene

position:5640737:1
position: 5640737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5696836:1
position: 5696836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5640737-5696836:1:exon

septin8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: septin8
product: septin 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 79 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033029226.1
SIO_010081: septin8
subclass of: SO_0000673
so part of: septin8
location: join(5640737..5640846,5648844..5649039,5653018..5653204,5657928..5658089,5665791..5665887,5667213..5667381,5669766..5669898,5672793..5672983,5695909..5696836)
location: region:5640737-5696836:1
so has part: feature:5640737-5640846:1:exon
so has part: feature:5648844-5649039:1:exon
so has part: feature:5653018-5653204:1:exon
so has part: feature:5657928-5658089:1:exon
so has part: feature:5665791-5665887:1:exon
so has part: feature:5667213-5667381:1:exon
so has part: feature:5669766-5669898:1:exon
so has part: feature:5672793-5672983:1:exon
so has part: feature:5695909-5696836:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5640737-5640846:1:exon

position:5640846:1
position: 5640846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5648844-5649039:1:exon

position:5648844:1
position: 5648844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5649039:1
position: 5649039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5653018-5653204:1:exon

position:5653018:1
position: 5653018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5653204:1
position: 5653204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5657928-5658089:1:exon

position:5657928:1
position: 5657928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5658089:1
position: 5658089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5665791-5665887:1:exon

position:5665791:1
position: 5665791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5665887:1
position: 5665887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5667213-5667381:1:exon

position:5667213:1
position: 5667213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5667381:1
position: 5667381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5669766-5669898:1:exon

position:5669766:1
position: 5669766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5669898:1
position: 5669898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5672793-5672983:1:exon

position:5672793:1
position: 5672793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5672983:1
position: 5672983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5695909-5696836:1:exon

position:5695909:1
position: 5695909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

septin8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: septin8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: septin-8 isoform X1
translation: MNTLFNTMFETEEATHHEPGVRLKPQSYCLKETNVDLKLTIINTVGFGDQVNKEESYKPVVDYIDTQFESYLQEELKIRRSLHDFHDTRIHACLYFIVPTGHCLKSLDLVTMKKLDSKVNIIPIVAKADTISKSELHKFKIKIMSELVSNGVQIYQFPTDDEAVAEINSTMNAHLPFAVVGSMDEAKVGSKMVKARQYPWGIVQVENENHCDFVKLREMLIRVNMEDLREQTHTRHYELYRRCKLEEMGFKDTDPDSKPFSLQETYEAKRNEFMSELQKKEEEMRQMFVARVKETEMDLKEKEKELHDQFDQLKKTHQEEKRRLEEKRRDLEEEMNAFNQRRMAAQTLQGHSFLATGQQPLKKDKDRKNRVAVTVNQSGVSLSTSKLMMAKASVEPLNCSNWWQAVQCCSCLVKSAAWREGFI
SIO_010081: septin8
subclass of: SO_0000673
so part of: septin8
location: join(5648873..5649039,5653018..5653204,5657928..5658089,5665791..5665887,5667213..5667381,5669766..5669898,5672793..5672983,5695909..5696074)
location: region:5648873-5696074:1
so has part: feature:5648873-5649039:1:exon
so has part: feature:5653018-5653204:1:exon
so has part: feature:5657928-5658089:1:exon
so has part: feature:5665791-5665887:1:exon
so has part: feature:5667213-5667381:1:exon
so has part: feature:5669766-5669898:1:exon
so has part: feature:5672793-5672983:1:exon
so has part: feature:5695909-5696074:1:exon

XP_032885117.1
type: Protein
SIO_000068: ncbiprotein

position:5648873:1
position: 5648873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5696074:1
position: 5696074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5648873-5649039:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5653018-5653204:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5657928-5658089:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5665791-5665887:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5667213-5667381:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5669766-5669898:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5672793-5672983:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5695909-5696074:1:exon

septin8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: septin8
product: septin 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_033029227.1
SIO_010081: septin8
subclass of: SO_0000673
so part of: septin8
location: join(5648873..5649039,5653018..5653204,5657928..5658089,5665791..5665887,5667213..5667381,5669766..5669898,5672793..5672983,5675063..5675144)
location: region:5648873-5675144:1
so has part: feature:5648873-5649039:1:exon
so has part: feature:5653018-5653204:1:exon
so has part: feature:5657928-5658089:1:exon
so has part: feature:5665791-5665887:1:exon
so has part: feature:5667213-5667381:1:exon
so has part: feature:5669766-5669898:1:exon
so has part: feature:5672793-5672983:1:exon
so has part: feature:5675063-5675144:1:exon

position:5675144:1
position: 5675144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5648873-5649039:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5653018-5653204:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5657928-5658089:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5665791-5665887:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5667213-5667381:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5669766-5669898:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5672793-5672983:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5675063-5675144:1:exon

position:5675063:1
position: 5675063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

septin8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: septin8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: septin-8 isoform X2
translation: MNTLFNTMFETEEATHHEPGVRLKPQSYCLKETNVDLKLTIINTVGFGDQVNKEESYKPVVDYIDTQFESYLQEELKIRRSLHDFHDTRIHACLYFIVPTGHCLKSLDLVTMKKLDSKVNIIPIVAKADTISKSELHKFKIKIMSELVSNGVQIYQFPTDDEAVAEINSTMNAHLPFAVVGSMDEAKVGSKMVKARQYPWGIVQVENENHCDFVKLREMLIRVNMEDLREQTHTRHYELYRRCKLEEMGFKDTDPDSKPFSLQETYEAKRNEFMSELQKKEEEMRQMFVARVKETEMDLKEKEKELHDQFDQLKKTHQEEKRRLEEKRRDLEEEMNAFNQRRMAAQTLQGHSFLATGQQPLKKDKDRKN
SIO_010081: septin8
subclass of: SO_0000673
so part of: septin8
location: join(5648873..5649039,5653018..5653204,5657928..5658089,5665791..5665887,5667213..5667381,5669766..5669898,5672793..5672983,5675063..5675066)
location: region:5648873-5675066:1
so has part: feature:5648873-5649039:1:exon
so has part: feature:5653018-5653204:1:exon
so has part: feature:5657928-5658089:1:exon
so has part: feature:5665791-5665887:1:exon
so has part: feature:5667213-5667381:1:exon
so has part: feature:5669766-5669898:1:exon
so has part: feature:5672793-5672983:1:exon
so has part: feature:5675063-5675066:1:exon

XP_032885118.1
type: Protein
SIO_000068: ncbiprotein

position:5675066:1
position: 5675066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5648873-5649039:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5653018-5653204:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5657928-5658089:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5665791-5665887:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5667213-5667381:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5669766-5669898:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5672793-5672983:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5675063-5675066:1:exon

LOC116978232
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116978232
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5724686..5733364)
location: region:5724686-5733364:-1
so has part: feature:5724686-5733364:-1:exon
subclass of: SO_0000011

116978232
type: Gene
SIO_000068: ncbigene

position:5724686:-1
position: 5724686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5733364:-1
position: 5733364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5724686-5733364:-1:exon

LOC116978232
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116978232
product: uncharacterized LOC116978232
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004413422.1
SIO_010081: LOC116978232
subclass of: SO_0000673
so part of: LOC116978232
location: complement(join(5724686..5724695,5731739..5731743,5733295..5733364))
location: region:5724686-5733364:-1
so has part: feature:5733295-5733364:-1:exon
so has part: feature:5731739-5731743:-1:exon
so has part: feature:5724686-5724695:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5733295-5733364:-1:exon

position:5733295:-1
position: 5733295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5731739-5731743:-1:exon

position:5731739:-1
position: 5731739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5731743:-1
position: 5731743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5724686-5724695:-1:exon

position:5724695:-1
position: 5724695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116978235
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116978235
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5733981..5748837
location: region:5733981-5748837:1
so has part: feature:5733981-5748837:1:exon
subclass of: SO_0000010

116978235
type: Gene
SIO_000068: ncbigene

position:5733981:1
position: 5733981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5748837:1
position: 5748837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5733981-5748837:1:exon

LOC116978235
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116978235
product: cyclin-G1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_033029232.1
SIO_010081: LOC116978235
subclass of: SO_0000673
so part of: LOC116978235
location: join(5733981..5734048,5740622..5740894,5742415..5742668,5744412..5744490,5744890..5744988,5746164..5746362,5748670..5748837)
location: region:5733981-5748837:1
so has part: feature:5733981-5734048:1:exon
so has part: feature:5740622-5740894:1:exon
so has part: feature:5742415-5742668:1:exon
so has part: feature:5744412-5744490:1:exon
so has part: feature:5744890-5744988:1:exon
so has part: feature:5746164-5746362:1:exon
so has part: feature:5748670-5748837:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5733981-5734048:1:exon

position:5734048:1
position: 5734048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5740622-5740894:1:exon

position:5740622:1
position: 5740622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5740894:1
position: 5740894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5742415-5742668:1:exon

position:5742415:1
position: 5742415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5742668:1
position: 5742668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5744412-5744490:1:exon

position:5744412:1
position: 5744412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5744490:1
position: 5744490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5744890-5744988:1:exon

position:5744890:1
position: 5744890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5744988:1
position: 5744988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5746164-5746362:1:exon

position:5746164:1
position: 5746164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5746362:1
position: 5746362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5748670-5748837:1:exon

position:5748670:1
position: 5748670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116978235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116978235
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-G1-like
translation: MIGIETEGARVEVVAAVNQLNRHLEQEPKYQPRISGLKAIESAHENGIRMTVRLRDLEIKDLLSLSQFFGFSTDTFVLAVSLLDRFLGLMKVQPKHLCCVGLCCMYLAVKSVEEVRTIPRVSELIGISQCRFTVSDMKRMEDIILDKLHWRLKGPTALNFLRLFHELVQNCSTSDRKEILNLERLESQLKACSCRFIFSKTKGSVLALSILALEVQTQGLLEVNKTVESLRLHSKISDPDLFYWKELVAKCLAEYSSTACSRPSHKKLMWIVSRRTSRQLKSCHRITPLPTIPEAAACTEPET
SIO_010081: LOC116978235
subclass of: SO_0000673
so part of: LOC116978235
location: join(5740622..5740894,5742415..5742668,5744412..5744490,5744890..5744988,5746164..5746362,5748670..5748677)
location: region:5740622-5748677:1
so has part: feature:5740622-5740894:1:exon
so has part: feature:5742415-5742668:1:exon
so has part: feature:5744412-5744490:1:exon
so has part: feature:5744890-5744988:1:exon
so has part: feature:5746164-5746362:1:exon
so has part: feature:5748670-5748677:1:exon

XP_032885123.1
type: Protein
SIO_000068: ncbiprotein

position:5748677:1
position: 5748677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5740622-5740894:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5742415-5742668:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5744412-5744490:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5744890-5744988:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5746164-5746362:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5748670-5748677:1:exon

hspa4
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: hspa4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5755094..5802548)
location: region:5755094-5802548:-1
so has part: feature:5755094-5802548:-1:exon
subclass of: SO_0000010

116978233
type: Gene
SIO_000068: ncbigene

position:5755094:-1
position: 5755094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5802548:-1
position: 5802548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5755094-5802548:-1:exon

hspa4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: hspa4
product: heat shock protein family A (Hsp70) member 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 40 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_033029229.1
SIO_010081: hspa4
subclass of: SO_0000673
so part of: hspa4
location: complement(join(5755094..5757428,5758833..5758994,5759839..5759958,5760871..5760978,5761208..5761333,5764801..5764956,5769783..5769872,5770877..5771073,5773981..5774114,5777305..5777411,5779245..5779396,5780359..5780435,5782555..5782799,5784840..5784973,5789490..5789589,5789713..5789835,5792841..5792981,5793829..5793886,5802148..5802548))
location: region:5755094-5802548:-1
so has part: feature:5802148-5802548:-1:exon
so has part: feature:5793829-5793886:-1:exon
so has part: feature:5792841-5792981:-1:exon
so has part: feature:5789713-5789835:-1:exon
so has part: feature:5789490-5789589:-1:exon
so has part: feature:5784840-5784973:-1:exon
so has part: feature:5782555-5782799:-1:exon
so has part: feature:5780359-5780435:-1:exon
so has part: feature:5779245-5779396:-1:exon
so has part: feature:5777305-5777411:-1:exon
so has part: feature:5773981-5774114:-1:exon
so has part: feature:5770877-5771073:-1:exon
so has part: feature:5769783-5769872:-1:exon
so has part: feature:5764801-5764956:-1:exon
so has part: feature:5761208-5761333:-1:exon
so has part: feature:5760871-5760978:-1:exon
so has part: feature:5759839-5759958:-1:exon
so has part: feature:5758833-5758994:-1:exon
so has part: feature:5755094-5757428:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5802148-5802548:-1:exon

position:5802148:-1
position: 5802148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5793829-5793886:-1:exon

position:5793829:-1
position: 5793829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5793886:-1
position: 5793886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5792841-5792981:-1:exon

position:5792841:-1
position: 5792841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5792981:-1
position: 5792981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5789713-5789835:-1:exon

position:5789713:-1
position: 5789713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5789835:-1
position: 5789835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5789490-5789589:-1:exon

position:5789490:-1
position: 5789490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5789589:-1
position: 5789589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5784840-5784973:-1:exon

position:5784840:-1
position: 5784840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5784973:-1
position: 5784973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5782555-5782799:-1:exon

position:5782555:-1
position: 5782555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5782799:-1
position: 5782799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5780359-5780435:-1:exon

position:5780359:-1
position: 5780359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5780435:-1
position: 5780435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5779245-5779396:-1:exon

position:5779245:-1
position: 5779245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5779396:-1
position: 5779396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5777305-5777411:-1:exon

position:5777305:-1
position: 5777305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5777411:-1
position: 5777411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5773981-5774114:-1:exon

position:5773981:-1
position: 5773981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5774114:-1
position: 5774114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5770877-5771073:-1:exon

position:5770877:-1
position: 5770877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5771073:-1
position: 5771073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5769783-5769872:-1:exon

position:5769783:-1
position: 5769783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5769872:-1
position: 5769872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5764801-5764956:-1:exon

position:5764801:-1
position: 5764801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5764956:-1
position: 5764956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5761208-5761333:-1:exon

position:5761208:-1
position: 5761208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5761333:-1
position: 5761333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5760871-5760978:-1:exon

position:5760871:-1
position: 5760871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5760978:-1
position: 5760978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:5759839-5759958:-1:exon

position:5759839:-1
position: 5759839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5759958:-1
position: 5759958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:5758833-5758994:-1:exon

position:5758833:-1
position: 5758833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5758994:-1
position: 5758994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:5755094-5757428:-1:exon

position:5757428:-1
position: 5757428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

hspa4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: hspa4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock 70 kDa protein 4
translation: MSVVGFDVGFQSCYVAVARGGGIETAANECSDRSTPSYVALGPRNRTFGAAAKSQVLSNVKNTIQGFKRLHGRTLTDPYLRTEQTKLAYDLVQMSNGTAGVKVSYMEEERNFTIEQVTGMLMTKLKETAEASLKKPVMDCVISVPCFFTDVERRSVMDAAQIAGLNCLRLINETTSVALAYGIYKQDLPAPEEKPRNVVFVDLGHSAFQVSICAFNKGKLKVLATAFDPNLGGRNFDEMLVNHFCEEFSKKYKLDVKSKIRAVIRLSQECEKLKKLMSANASDLPLNIECFMNDIDVSGVLNRGQFEEMCGPLLSRLESPLRSLLEQTKLKREDIYAVEIVGGATRTPAIKERITKFFGKPFSTTLNADEAVARGCALQCAILSPAFKVREFSITDLVPFPISMRWNSPAEEGLGDCEVFPKNHAAPFSKVLTFYRKDSFDLEAIYSCPKELPFPDPNIGRFTILKVVPQTDGSSSRVKVKVRVNIHGVFSVSSASLVEVQKCEEVDDVPMETDQQSQANQKEEESKMQIDQQEEPAHGDGNPPSAAENQKNEMETGETASKENKNKDQPPQAKKAKVKTKTVDLPIENHLQWQLDQQLLNVFIESEGKMIMQDKLEKERNDAKNALEEYVYESREKLGGIYEKFVNKDEQSKLSLLLEDTENWLYEGGEDQGKQVYIDKLAELKKLGQPIRDRYQEFEECPRAFDEMGRQVQQYMKIINSYRNKDELYDHLDLTEMEKVAQYVQEAMGWMNGKMNMQSKQSLTQDPLVKCADIRAKVKDLANLCNPIVNKPKPKVEPPKEEKEAEQNGPVSSEENASSEGPTPTSAENAQNNTQHHQQNLPEMDIE
SIO_010081: hspa4
subclass of: SO_0000673
so part of: hspa4
location: complement(join(5757222..5757428,5758833..5758994,5759839..5759958,5760871..5760978,5761208..5761333,5764801..5764956,5769783..5769872,5770877..5771073,5773981..5774114,5777305..5777411,5779245..5779396,5780359..5780435,5782555..5782799,5784840..5784973,5789490..5789589,5789713..5789835,5792841..5792981,5793829..5793886,5802148..5802254))
location: region:5757222-5802254:-1
so has part: feature:5802148-5802254:-1:exon
so has part: feature:5793829-5793886:-1:exon
so has part: feature:5792841-5792981:-1:exon
so has part: feature:5789713-5789835:-1:exon
so has part: feature:5789490-5789589:-1:exon
so has part: feature:5784840-5784973:-1:exon
so has part: feature:5782555-5782799:-1:exon
so has part: feature:5780359-5780435:-1:exon
so has part: feature:5779245-5779396:-1:exon
so has part: feature:5777305-5777411:-1:exon
so has part: feature:5773981-5774114:-1:exon
so has part: feature:5770877-5771073:-1:exon
so has part: feature:5769783-5769872:-1:exon
so has part: feature:5764801-5764956:-1:exon
so has part: feature:5761208-5761333:-1:exon
so has part: feature:5760871-5760978:-1:exon
so has part: feature:5759839-5759958:-1:exon
so has part: feature:5758833-5758994:-1:exon
so has part: feature:5757222-5757428:-1:exon

XP_032885120.1
type: Protein
SIO_000068: ncbiprotein

position:5757222:-1
position: 5757222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5802254:-1
position: 5802254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5802148-5802254:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5793829-5793886:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5792841-5792981:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5789713-5789835:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5789490-5789589:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5784840-5784973:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5782555-5782799:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5780359-5780435:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5779245-5779396:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5777305-5777411:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5773981-5774114:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5770877-5771073:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5769783-5769872:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5764801-5764956:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5761208-5761333:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5760871-5760978:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5759839-5759958:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5758833-5758994:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5757222-5757428:-1:exon

rnf14
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: rnf14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5802956..5827807
location: region:5802956-5827807:1
so has part: feature:5802956-5827807:1:exon
subclass of: SO_0000010

116978234
type: Gene
SIO_000068: ncbigene

position:5802956:1
position: 5802956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5827807:1
position: 5827807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5802956-5827807:1:exon

rnf14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: rnf14
product: ring finger protein 14, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_033029230.1
SIO_010081: rnf14
subclass of: SO_0000673
so part of: rnf14
location: join(5802956..5803114,5808172..5808332,5810281..5810429,5812737..5813240,5817642..5817870,5819660..5819832,5823825..5823955,5827269..5827807)
location: region:5802956-5827807:1
so has part: feature:5802956-5803114:1:exon
so has part: feature:5808172-5808332:1:exon
so has part: feature:5810281-5810429:1:exon
so has part: feature:5812737-5813240:1:exon
so has part: feature:5817642-5817870:1:exon
so has part: feature:5819660-5819832:1:exon
so has part: feature:5823825-5823955:1:exon
so has part: feature:5827269-5827807:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5802956-5803114:1:exon

position:5803114:1
position: 5803114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5808172-5808332:1:exon

position:5808172:1
position: 5808172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5808332:1
position: 5808332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5810281-5810429:1:exon

position:5810281:1
position: 5810281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5810429:1
position: 5810429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5812737-5813240:1:exon

position:5812737:1
position: 5812737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5813240:1
position: 5813240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5817642-5817870:1:exon

position:5817642:1
position: 5817642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5817870:1
position: 5817870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5819660-5819832:1:exon

position:5819660:1
position: 5819660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5819832:1
position: 5819832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5823825-5823955:1:exon

position:5823825:1
position: 5823825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5823955:1
position: 5823955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5827269-5827807:1:exon

position:5827269:1
position: 5827269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

rnf14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: rnf14
product: ring finger protein 14, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033029231.1
SIO_010081: rnf14
subclass of: SO_0000673
so part of: rnf14
location: join(5807679..5807731,5808172..5808332,5810281..5810429,5812737..5813240,5817642..5817870,5819660..5819832,5823825..5823955,5827269..5827807)
location: region:5807679-5827807:1
so has part: feature:5807679-5807731:1:exon
so has part: feature:5808172-5808332:1:exon
so has part: feature:5810281-5810429:1:exon
so has part: feature:5812737-5813240:1:exon
so has part: feature:5817642-5817870:1:exon
so has part: feature:5819660-5819832:1:exon
so has part: feature:5823825-5823955:1:exon
so has part: feature:5827269-5827807:1:exon

position:5807679:1
position: 5807679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5807679-5807731:1:exon

position:5807731:1
position: 5807731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5808172-5808332:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5810281-5810429:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5812737-5813240:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5817642-5817870:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5819660-5819832:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5823825-5823955:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5827269-5827807:1:exon

rnf14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: rnf14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF14
translation: MSSRDREEQEDELLALASIYDEDEFRRAESSQGGEINVCLELPSSFKIFVYGDEKQNKEDLIEYIVSFLPPLVLNFDLPPDYPSCSPPKYTLSCKWLFRAQLSALCTYLDKIWKDSGNCVVLFSWMQFLKEETLSFLCIESPLEIRRDVKGTSECIFSKGKKELGLPDNAECPLDPRAIRDVASWGSILREILDFDQKQQQQTFNGKAFTCGVCFSEKLGTDCTYFKECKHVYCRACMKEYFEIQIRDGNVQCLNCPESECASIATPAQVKELVEEEMFARYDRLLLQSTLDLMSDVAYCPRSVCRSVVLLEPGSTMGVCPGCRYAFCALCEMAYHGISPCKLKSEKLSELRDEYLASDESGQKLLEKTYGRRVIEKAVEELCSQDWLEKNSKPCPRCGTNIQKMNGCNKMTCTGCKHYFCWLCICPLPRLDPYGHFSNSNSPCFNGLFQGIEVDEDLLSDEDDEDIFL
SIO_010081: rnf14
subclass of: SO_0000673
so part of: rnf14
location: join(5808179..5808332,5810281..5810429,5812737..5813240,5817642..5817870,5819660..5819832,5823825..5823955,5827269..5827338)
location: region:5808179-5827338:1
so has part: feature:5808179-5808332:1:exon
so has part: feature:5810281-5810429:1:exon
so has part: feature:5812737-5813240:1:exon
so has part: feature:5817642-5817870:1:exon
so has part: feature:5819660-5819832:1:exon
so has part: feature:5823825-5823955:1:exon
so has part: feature:5827269-5827338:1:exon

XP_032885121.1
type: Protein
SIO_000068: ncbiprotein

position:5808179:1
position: 5808179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5827338:1
position: 5827338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5808179-5808332:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5810281-5810429:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5812737-5813240:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5817642-5817870:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5819660-5819832:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5823825-5823955:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5827269-5827338:1:exon

rnf14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: rnf14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF14
translation: MSSRDREEQEDELLALASIYDEDEFRRAESSQGGEINVCLELPSSFKIFVYGDEKQNKEDLIEYIVSFLPPLVLNFDLPPDYPSCSPPKYTLSCKWLFRAQLSALCTYLDKIWKDSGNCVVLFSWMQFLKEETLSFLCIESPLEIRRDVKGTSECIFSKGKKELGLPDNAECPLDPRAIRDVASWGSILREILDFDQKQQQQTFNGKAFTCGVCFSEKLGTDCTYFKECKHVYCRACMKEYFEIQIRDGNVQCLNCPESECASIATPAQVKELVEEEMFARYDRLLLQSTLDLMSDVAYCPRSVCRSVVLLEPGSTMGVCPGCRYAFCALCEMAYHGISPCKLKSEKLSELRDEYLASDESGQKLLEKTYGRRVIEKAVEELCSQDWLEKNSKPCPRCGTNIQKMNGCNKMTCTGCKHYFCWLCICPLPRLDPYGHFSNSNSPCFNGLFQGIEVDEDLLSDEDDEDIFL
SIO_010081: rnf14
subclass of: SO_0000673
so part of: rnf14
location: join(5808179..5808332,5810281..5810429,5812737..5813240,5817642..5817870,5819660..5819832,5823825..5823955,5827269..5827338)
location: region:5808179-5827338:1
so has part: feature:5808179-5808332:1:exon
so has part: feature:5810281-5810429:1:exon
so has part: feature:5812737-5813240:1:exon
so has part: feature:5817642-5817870:1:exon
so has part: feature:5819660-5819832:1:exon
so has part: feature:5823825-5823955:1:exon
so has part: feature:5827269-5827338:1:exon

XP_032885122.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5808179-5808332:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5810281-5810429:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5812737-5813240:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5817642-5817870:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5819660-5819832:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5823825-5823955:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5827269-5827338:1:exon

LOC116978236
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116978236
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5841015..5863962
location: region:5841015-5863962:1
so has part: feature:5841015-5863962:1:exon
subclass of: SO_0000010

116978236
type: Gene
SIO_000068: ncbigene

position:5841015:1
position: 5841015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5863962:1
position: 5863962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5841015-5863962:1:exon

LOC116978236
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116978236
product: glucosamine-6-phosphate isomerase 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033029233.1
SIO_010081: LOC116978236
subclass of: SO_0000673
so part of: LOC116978236
location: join(5841015..5841092,5849358..5849529,5852165..5852266,5854839..5855021,5856112..5856296,5857608..5857782,5863234..5863962)
location: region:5841015-5863962:1
so has part: feature:5841015-5841092:1:exon
so has part: feature:5849358-5849529:1:exon
so has part: feature:5852165-5852266:1:exon
so has part: feature:5854839-5855021:1:exon
so has part: feature:5856112-5856296:1:exon
so has part: feature:5857608-5857782:1:exon
so has part: feature:5863234-5863962:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5841015-5841092:1:exon

position:5841092:1
position: 5841092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5849358-5849529:1:exon

position:5849358:1
position: 5849358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5849529:1
position: 5849529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5852165-5852266:1:exon

position:5852165:1
position: 5852165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5852266:1
position: 5852266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5854839-5855021:1:exon

position:5854839:1
position: 5854839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5855021:1
position: 5855021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5856112-5856296:1:exon

position:5856112:1
position: 5856112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5856296:1
position: 5856296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5857608-5857782:1:exon

position:5857608:1
position: 5857608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5857782:1
position: 5857782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5863234-5863962:1:exon

position:5863234:1
position: 5863234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116978236
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116978236
product: glucosamine-6-phosphate isomerase 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033029234.1
SIO_010081: LOC116978236
subclass of: SO_0000673
so part of: LOC116978236
location: join(5849333..5849529,5852165..5852266,5854839..5855021,5856112..5856296,5857608..5857782,5863234..5863962)
location: region:5849333-5863962:1
so has part: feature:5849333-5849529:1:exon
so has part: feature:5852165-5852266:1:exon
so has part: feature:5854839-5855021:1:exon
so has part: feature:5856112-5856296:1:exon
so has part: feature:5857608-5857782:1:exon
so has part: feature:5863234-5863962:1:exon

position:5849333:1
position: 5849333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5849333-5849529:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5852165-5852266:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5854839-5855021:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5856112-5856296:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5857608-5857782:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5863234-5863962:1:exon

LOC116978236
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116978236
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucosamine-6-phosphate isomerase 1-like
translation: MKLIILEDATKATEWAAKYIRNQIIRFNPGPERYFTLGLPTGSTPLGCYKKLIEYYRNGDLSFKYVKTFNMDEYVGLPRDHPESFHSFMWNNFFNYMDILPENAHILDGTAPDLDAECRAFEEKIKSTGGIELFVGGIGPDGHIAFNEPGSSLVSRTRVKTLAMDTILANARFFNGDSSKVPTMALTVGVGTVMDAREVLILITGAHKSLALHKAIEDGVNHMSTVSALQQHPKTLFVCDEDATSELRMKTVRYFKGLSEVHNKLVEPLYSMKQPCTIKQCE
SIO_010081: LOC116978236
subclass of: SO_0000673
so part of: LOC116978236
location: join(5849406..5849529,5852165..5852266,5854839..5855021,5856112..5856296,5857608..5857782,5863234..5863313)
location: region:5849406-5863313:1
so has part: feature:5849406-5849529:1:exon
so has part: feature:5852165-5852266:1:exon
so has part: feature:5854839-5855021:1:exon
so has part: feature:5856112-5856296:1:exon
so has part: feature:5857608-5857782:1:exon
so has part: feature:5863234-5863313:1:exon

XP_032885124.1
type: Protein
SIO_000068: ncbiprotein

position:5849406:1
position: 5849406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5863313:1
position: 5863313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5849406-5849529:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5852165-5852266:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5854839-5855021:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5856112-5856296:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5857608-5857782:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5863234-5863313:1:exon

LOC116978236
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116978236
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucosamine-6-phosphate isomerase 1-like
translation: MKLIILEDATKATEWAAKYIRNQIIRFNPGPERYFTLGLPTGSTPLGCYKKLIEYYRNGDLSFKYVKTFNMDEYVGLPRDHPESFHSFMWNNFFNYMDILPENAHILDGTAPDLDAECRAFEEKIKSTGGIELFVGGIGPDGHIAFNEPGSSLVSRTRVKTLAMDTILANARFFNGDSSKVPTMALTVGVGTVMDAREVLILITGAHKSLALHKAIEDGVNHMSTVSALQQHPKTLFVCDEDATSELRMKTVRYFKGLSEVHNKLVEPLYSMKQPCTIKQCE
SIO_010081: LOC116978236
subclass of: SO_0000673
so part of: LOC116978236
location: join(5849406..5849529,5852165..5852266,5854839..5855021,5856112..5856296,5857608..5857782,5863234..5863313)
location: region:5849406-5863313:1
so has part: feature:5849406-5849529:1:exon
so has part: feature:5852165-5852266:1:exon
so has part: feature:5854839-5855021:1:exon
so has part: feature:5856112-5856296:1:exon
so has part: feature:5857608-5857782:1:exon
so has part: feature:5863234-5863313:1:exon

XP_032885125.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5849406-5849529:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5852165-5852266:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5854839-5855021:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5856112-5856296:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5857608-5857782:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5863234-5863313:1:exon

gabrg2
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: gabrg2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6440706..6534983)
location: region:6440706-6534983:-1
so has part: feature:6440706-6534983:-1:exon
subclass of: SO_0000010

116978237
type: Gene
SIO_000068: ncbigene

position:6440706:-1
position: 6440706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6534983:-1
position: 6534983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6440706-6534983:-1:exon

gabrg2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: gabrg2
product: gamma-aminobutyric acid type A receptor subunit gamma2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033029236.1
SIO_010081: gabrg2
subclass of: SO_0000673
so part of: gabrg2
location: complement(join(6440706..6441594,6451412..6451617,6459259..6459411,6510488..6510625,6513093..6513175,6516651..6516871,6529207..6529274,6529390..6529538,6534697..6534983))
location: region:6440706-6534983:-1
so has part: feature:6534697-6534983:-1:exon
so has part: feature:6529390-6529538:-1:exon
so has part: feature:6529207-6529274:-1:exon
so has part: feature:6516651-6516871:-1:exon
so has part: feature:6513093-6513175:-1:exon
so has part: feature:6510488-6510625:-1:exon
so has part: feature:6459259-6459411:-1:exon
so has part: feature:6451412-6451617:-1:exon
so has part: feature:6440706-6441594:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6534697-6534983:-1:exon

position:6534697:-1
position: 6534697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6529390-6529538:-1:exon

position:6529390:-1
position: 6529390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6529538:-1
position: 6529538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6529207-6529274:-1:exon

position:6529207:-1
position: 6529207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6529274:-1
position: 6529274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6516651-6516871:-1:exon

position:6516651:-1
position: 6516651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6516871:-1
position: 6516871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6513093-6513175:-1:exon

position:6513093:-1
position: 6513093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6513175:-1
position: 6513175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6510488-6510625:-1:exon

position:6510488:-1
position: 6510488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6510625:-1
position: 6510625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6459259-6459411:-1:exon

position:6459259:-1
position: 6459259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6459411:-1
position: 6459411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6451412-6451617:-1:exon

position:6451412:-1
position: 6451412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6451617:-1
position: 6451617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6440706-6441594:-1:exon

position:6441594:-1
position: 6441594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

gabrg2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: gabrg2
product: gamma-aminobutyric acid type A receptor subunit gamma2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033029235.1
SIO_010081: gabrg2
subclass of: SO_0000673
so part of: gabrg2
location: complement(join(6440707..6441594,6448852..6448875,6451412..6451617,6459259..6459411,6510488..6510625,6513093..6513175,6516651..6516871,6529207..6529274,6529390..6529538,6534697..6534982))
location: region:6440707-6534982:-1
so has part: feature:6534697-6534982:-1:exon
so has part: feature:6529390-6529538:-1:exon
so has part: feature:6529207-6529274:-1:exon
so has part: feature:6516651-6516871:-1:exon
so has part: feature:6513093-6513175:-1:exon
so has part: feature:6510488-6510625:-1:exon
so has part: feature:6459259-6459411:-1:exon
so has part: feature:6451412-6451617:-1:exon
so has part: feature:6448852-6448875:-1:exon
so has part: feature:6440707-6441594:-1:exon

position:6440707:-1
position: 6440707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6534982:-1
position: 6534982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6534697-6534982:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6529390-6529538:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6529207-6529274:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6516651-6516871:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6513093-6513175:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6510488-6510625:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6459259-6459411:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6451412-6451617:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6448852-6448875:-1:exon

position:6448852:-1
position: 6448852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6448875:-1
position: 6448875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6440707-6441594:-1:exon

gabrg2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: gabrg2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-aminobutyric acid receptor subunit gamma-2 isoform X2
translation: MASSTTWLKSPTASIAVPSPRKVIFWTFLVACFTPCSSKNEDEDYEDLTLNKTWVLTPKIYESDVTLILNNLLKGYDNKLRPDIGVKPTIIGTDMYINSIGPVNAIKMEYTIDIFFAQTWYDRRLKFNGTMKVLGLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRILYTLRLTIDAECQLQLHNFPMDEHSCSLAFSSYGYPKDEIIYQWKQSSVEIGDTRSWRLYQFTFIGLRNTTEFVKTTSGDYVVMAVYFDLSRRMGYFTIQTYIPCTLTVVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAIDLFVSVCFLFVFAALIEYGTLHYFVSNRKPSKNKGKKKRNRAPTVEIRPRSSAVQMNNSLHQQERDEEYGYECLDGKDCTSFFCCFDDCRRGAWRQGRLHIRIRKIDSYARIFFPTAFGLFNLVYWVGYLYL
SIO_010081: gabrg2
subclass of: SO_0000673
so part of: gabrg2
location: complement(join(6441319..6441594,6451412..6451617,6459259..6459411,6510488..6510625,6513093..6513175,6516651..6516871,6529207..6529274,6529390..6529538,6534697..6534803))
location: region:6441319-6534803:-1
so has part: feature:6534697-6534803:-1:exon
so has part: feature:6529390-6529538:-1:exon
so has part: feature:6529207-6529274:-1:exon
so has part: feature:6516651-6516871:-1:exon
so has part: feature:6513093-6513175:-1:exon
so has part: feature:6510488-6510625:-1:exon
so has part: feature:6459259-6459411:-1:exon
so has part: feature:6451412-6451617:-1:exon
so has part: feature:6441319-6441594:-1:exon

XP_032885127.1
type: Protein
SIO_000068: ncbiprotein

position:6441319:-1
position: 6441319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6534803:-1
position: 6534803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6534697-6534803:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6529390-6529538:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6529207-6529274:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6516651-6516871:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6513093-6513175:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6510488-6510625:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6459259-6459411:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6451412-6451617:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6441319-6441594:-1:exon

gabrg2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: gabrg2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-aminobutyric acid receptor subunit gamma-2 isoform X1
translation: MASSTTWLKSPTASIAVPSPRKVIFWTFLVACFTPCSSKNEDEDYEDLTLNKTWVLTPKIYESDVTLILNNLLKGYDNKLRPDIGVKPTIIGTDMYINSIGPVNAIKMEYTIDIFFAQTWYDRRLKFNGTMKVLGLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRILYTLRLTIDAECQLQLHNFPMDEHSCSLAFSSYGYPKDEIIYQWKQSSVEIGDTRSWRLYQFTFIGLRNTTEFVKTTSGDYVVMAVYFDLSRRMGYFTIQTYIPCTLTVVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAIDLFVSVCFLFVFAALIEYGTLHYFVSNRKPSKNKGKKKRNRLLRMFSSKAPTVEIRPRSSAVQMNNSLHQQERDEEYGYECLDGKDCTSFFCCFDDCRRGAWRQGRLHIRIRKIDSYARIFFPTAFGLFNLVYWVGYLYL
SIO_010081: gabrg2
subclass of: SO_0000673
so part of: gabrg2
location: complement(join(6441319..6441594,6448852..6448875,6451412..6451617,6459259..6459411,6510488..6510625,6513093..6513175,6516651..6516871,6529207..6529274,6529390..6529538,6534697..6534803))
location: region:6441319-6534803:-1
so has part: feature:6534697-6534803:-1:exon
so has part: feature:6529390-6529538:-1:exon
so has part: feature:6529207-6529274:-1:exon
so has part: feature:6516651-6516871:-1:exon
so has part: feature:6513093-6513175:-1:exon
so has part: feature:6510488-6510625:-1:exon
so has part: feature:6459259-6459411:-1:exon
so has part: feature:6451412-6451617:-1:exon
so has part: feature:6448852-6448875:-1:exon
so has part: feature:6441319-6441594:-1:exon

XP_032885126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6534697-6534803:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6529390-6529538:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6529207-6529274:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6516651-6516871:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6513093-6513175:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6510488-6510625:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6459259-6459411:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6451412-6451617:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6448852-6448875:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6441319-6441594:-1:exon

LOC116978239
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116978239
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6619328..6650008)
location: region:6619328-6650008:-1
so has part: feature:6619328-6650008:-1:exon
subclass of: SO_0000010

116978239
type: Gene
SIO_000068: ncbigene

position:6619328:-1
position: 6619328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6650008:-1
position: 6650008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6619328-6650008:-1:exon

LOC116978239
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116978239
product: gamma-aminobutyric acid receptor subunit alpha-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 69 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033029237.1
SIO_010081: LOC116978239
subclass of: SO_0000673
so part of: LOC116978239
location: complement(join(6619328..6620029,6622686..6622888,6624639..6624791,6628473..6628616,6633027..6633109,6637351..6637571,6639490..6639557,6642456..6642559,6648621..6648727,6649914..6650008))
location: region:6619328-6650008:-1
so has part: feature:6649914-6650008:-1:exon
so has part: feature:6648621-6648727:-1:exon
so has part: feature:6642456-6642559:-1:exon
so has part: feature:6639490-6639557:-1:exon
so has part: feature:6637351-6637571:-1:exon
so has part: feature:6633027-6633109:-1:exon
so has part: feature:6628473-6628616:-1:exon
so has part: feature:6624639-6624791:-1:exon
so has part: feature:6622686-6622888:-1:exon
so has part: feature:6619328-6620029:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6649914-6650008:-1:exon

position:6649914:-1
position: 6649914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6648621-6648727:-1:exon

position:6648621:-1
position: 6648621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6648727:-1
position: 6648727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6642456-6642559:-1:exon

position:6642456:-1
position: 6642456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6642559:-1
position: 6642559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6639490-6639557:-1:exon

position:6639490:-1
position: 6639490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6639557:-1
position: 6639557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6637351-6637571:-1:exon

position:6637351:-1
position: 6637351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6637571:-1
position: 6637571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6633027-6633109:-1:exon

position:6633027:-1
position: 6633027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6633109:-1
position: 6633109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6628473-6628616:-1:exon

position:6628473:-1
position: 6628473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6628616:-1
position: 6628616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6624639-6624791:-1:exon

position:6624639:-1
position: 6624639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6624791:-1
position: 6624791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6622686-6622888:-1:exon

position:6622686:-1
position: 6622686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6622888:-1
position: 6622888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6619328-6620029:-1:exon

position:6620029:-1
position: 6620029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116978239
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116978239
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-aminobutyric acid receptor subunit alpha-1-like
translation: MERGAALARCISPTLCLLLLLNAAIRPSLQMSEEAKNNITIFTRILDSLLDGYDNRLRPGLGERITRVKTDIYVTSFGPVSDTDMEYTIDVFFRQSWEDERLKFKGPMTILRLNNLMASRIWTPDTFFHNGKKSVAHNMTMPNKLLRITDDGTLLYTMRLTVRAECPMHLEDFPMDAHACPLKFGSYAYTISEVVYTWTHGASQSVVVAEDGSRLNQYDLMGQSVGKLIIKSSTGEYVVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATALDWFIAVCYAFVFSALIEFATVNYFTKRSWAWDGKSLVPEKKKEKEREALLKKNNTYTATSANFVPNIAKDAGLATISKSAAVESKEPKLEQKPPEPVKTFNSVSKIDRLARIAFPLMFGIFNLVYWATYLNREPVIKGDEEHN
SIO_010081: LOC116978239
subclass of: SO_0000673
so part of: LOC116978239
location: complement(join(6619718..6620029,6622686..6622888,6624639..6624791,6628473..6628616,6633027..6633109,6637351..6637571,6639490..6639557,6642456..6642559,6648621..6648703))
location: region:6619718-6648703:-1
so has part: feature:6648621-6648703:-1:exon
so has part: feature:6642456-6642559:-1:exon
so has part: feature:6639490-6639557:-1:exon
so has part: feature:6637351-6637571:-1:exon
so has part: feature:6633027-6633109:-1:exon
so has part: feature:6628473-6628616:-1:exon
so has part: feature:6624639-6624791:-1:exon
so has part: feature:6622686-6622888:-1:exon
so has part: feature:6619718-6620029:-1:exon

XP_032885128.1
type: Protein
SIO_000068: ncbiprotein

position:6619718:-1
position: 6619718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6648703:-1
position: 6648703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6648621-6648703:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6642456-6642559:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6639490-6639557:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6637351-6637571:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6633027-6633109:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6628473-6628616:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6624639-6624791:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6622686-6622888:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6619718-6620029:-1:exon

gabra6
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: gabra6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6763106..6797252)
location: region:6763106-6797252:-1
so has part: feature:6763106-6797252:-1:exon
subclass of: SO_0000010

116978240
type: Gene
SIO_000068: ncbigene

position:6763106:-1
position: 6763106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6797252:-1
position: 6797252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6763106-6797252:-1:exon

gabra6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: gabra6
product: gamma-aminobutyric acid type A receptor subunit alpha6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 86 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033029238.1
SIO_010081: gabra6
subclass of: SO_0000673
so part of: gabra6
location: complement(join(6763106..6763902,6775347..6775597,6777756..6777908,6780521..6780664,6795074..6795156,6795247..6795467,6795963..6796030,6796356..6796486,6796747..6797252))
location: region:6763106-6797252:-1
so has part: feature:6796747-6797252:-1:exon
so has part: feature:6796356-6796486:-1:exon
so has part: feature:6795963-6796030:-1:exon
so has part: feature:6795247-6795467:-1:exon
so has part: feature:6795074-6795156:-1:exon
so has part: feature:6780521-6780664:-1:exon
so has part: feature:6777756-6777908:-1:exon
so has part: feature:6775347-6775597:-1:exon
so has part: feature:6763106-6763902:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6796747-6797252:-1:exon

position:6796747:-1
position: 6796747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6796356-6796486:-1:exon

position:6796356:-1
position: 6796356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6796486:-1
position: 6796486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6795963-6796030:-1:exon

position:6795963:-1
position: 6795963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6796030:-1
position: 6796030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6795247-6795467:-1:exon

position:6795247:-1
position: 6795247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6795467:-1
position: 6795467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6795074-6795156:-1:exon

position:6795074:-1
position: 6795074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6795156:-1
position: 6795156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6780521-6780664:-1:exon

position:6780521:-1
position: 6780521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6780664:-1
position: 6780664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6777756-6777908:-1:exon

position:6777756:-1
position: 6777756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6777908:-1
position: 6777908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6775347-6775597:-1:exon

position:6775347:-1
position: 6775347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6775597:-1
position: 6775597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6763106-6763902:-1:exon

position:6763902:-1
position: 6763902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

gabra6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: gabra6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-aminobutyric acid receptor subunit alpha-6
translation: MTAKVRRLKIWDTQMVTADMGSVVAMSTSRVGLLIFVLCTALSCIGEALDKKSSNRDNEVRIHSENITRILDRLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDKRLEFEGPIEILRLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNRLFRIMQNGTVLYTMRLTINAACPMRLVNFPMDGHACPLKFGSYAYPRSEIIYTWTKGPLYSVEVPDESSSLLQYDLVGQTVSSETMKSNTGEYIVMTVYFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNLQTQRDLRKTARSAALSAALAVSDSEKNVSPSDSNCSLKKRTPTSASQKESAANAGADANSRADNVSSILCTLSGLTSSPQPSPDTGTSKIDQYARILFPLSFGAFNLVYWIVYLSKDTMEMGSNI
SIO_010081: gabra6
subclass of: SO_0000673
so part of: gabra6
location: complement(join(6763612..6763902,6775347..6775597,6777756..6777908,6780521..6780664,6795074..6795156,6795247..6795467,6795963..6796030,6796356..6796486,6796747..6796877))
location: region:6763612-6796877:-1
so has part: feature:6796747-6796877:-1:exon
so has part: feature:6796356-6796486:-1:exon
so has part: feature:6795963-6796030:-1:exon
so has part: feature:6795247-6795467:-1:exon
so has part: feature:6795074-6795156:-1:exon
so has part: feature:6780521-6780664:-1:exon
so has part: feature:6777756-6777908:-1:exon
so has part: feature:6775347-6775597:-1:exon
so has part: feature:6763612-6763902:-1:exon

XP_032885129.1
type: Protein
SIO_000068: ncbiprotein

position:6763612:-1
position: 6763612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6796877:-1
position: 6796877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6796747-6796877:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6796356-6796486:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6795963-6796030:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6795247-6795467:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6795074-6795156:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6780521-6780664:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6777756-6777908:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6775347-6775597:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6763612-6763902:-1:exon

gabrb2
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: gabrb2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6815209..6914010
location: region:6815209-6914010:1
so has part: feature:6815209-6914010:1:exon
subclass of: SO_0000010

116978241
type: Gene
SIO_000068: ncbigene

position:6815209:1
position: 6815209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6914010:1
position: 6914010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6815209-6914010:1:exon

gabrb2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: gabrb2
product: gamma-aminobutyric acid type A receptor subunit beta2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033029239.1
SIO_010081: gabrb2
subclass of: SO_0000673
so part of: gabrb2
location: join(6815209..6815998,6816122..6816213,6817511..6817578,6879323..6879543,6901279..6901361,6906595..6906732,6908404..6908556,6909818..6910059,6912101..6914010)
location: region:6815209-6914010:1
so has part: feature:6815209-6815998:1:exon
so has part: feature:6816122-6816213:1:exon
so has part: feature:6817511-6817578:1:exon
so has part: feature:6879323-6879543:1:exon
so has part: feature:6901279-6901361:1:exon
so has part: feature:6906595-6906732:1:exon
so has part: feature:6908404-6908556:1:exon
so has part: feature:6909818-6910059:1:exon
so has part: feature:6912101-6914010:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6815209-6815998:1:exon

position:6815998:1
position: 6815998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6816122-6816213:1:exon

position:6816122:1
position: 6816122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6816213:1
position: 6816213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6817511-6817578:1:exon

position:6817511:1
position: 6817511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6817578:1
position: 6817578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6879323-6879543:1:exon

position:6879323:1
position: 6879323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6879543:1
position: 6879543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6901279-6901361:1:exon

position:6901279:1
position: 6901279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6901361:1
position: 6901361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6906595-6906732:1:exon

position:6906595:1
position: 6906595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6906732:1
position: 6906732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6908404-6908556:1:exon

position:6908404:1
position: 6908404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6908556:1
position: 6908556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6909818-6910059:1:exon

position:6909818:1
position: 6909818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6910059:1
position: 6910059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6912101-6914010:1:exon

position:6912101:1
position: 6912101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

gabrb2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: gabrb2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-aminobutyric acid receptor subunit beta-2
translation: MLKRGYFRALSFPLLVAMVCAQSVNDPSNMALVKETVDRLLKGYDIRLRPDFGGDPVLVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGERAVTGVEKIELPQFSIVDYNLLSKNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMCCFVFVFLALLEYALVNYIFFGRGPQRQKKIAEKAAKANNEKIRSGDKMDPHENILLSTLEIKNEMSAAEITMCIGDPRSTMMPYDTSGIQYRKAGLSRHNFGRSALERHVAQKKSRLRRRASQLKINIPDLTDVNAIDKWSRVIFPLVFGFFNVVYWLYYVN
SIO_010081: gabrb2
subclass of: SO_0000673
so part of: gabrb2
location: join(6815931..6815998,6816122..6816213,6817511..6817578,6879323..6879543,6901279..6901361,6906595..6906732,6908404..6908556,6909818..6910059,6912101..6912448)
location: region:6815931-6912448:1
so has part: feature:6815931-6815998:1:exon
so has part: feature:6816122-6816213:1:exon
so has part: feature:6817511-6817578:1:exon
so has part: feature:6879323-6879543:1:exon
so has part: feature:6901279-6901361:1:exon
so has part: feature:6906595-6906732:1:exon
so has part: feature:6908404-6908556:1:exon
so has part: feature:6909818-6910059:1:exon
so has part: feature:6912101-6912448:1:exon

XP_032885130.1
type: Protein
SIO_000068: ncbiprotein

position:6815931:1
position: 6815931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6912448:1
position: 6912448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6815931-6815998:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6816122-6816213:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6817511-6817578:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6879323-6879543:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6901279-6901361:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6906595-6906732:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6908404-6908556:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6909818-6910059:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6912101-6912448:1:exon

LOC116978242
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116978242
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6964574..7162349
location: region:6964574-7162349:1
so has part: feature:6964574-7162349:1:exon
subclass of: SO_0000010

116978242
type: Gene
SIO_000068: ncbigene

position:6964574:1
position: 6964574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7162349:1
position: 7162349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6964574-7162349:1:exon

LOC116978242
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116978242
product: probable phospholipid-transporting ATPase VB, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033029240.1
SIO_010081: LOC116978242
subclass of: SO_0000673
so part of: LOC116978242
location: join(6964574..6964751,7035356..7035452,7088783..7089111,7090189..7090383,7095315..7095519,7096474..7096559,7098417..7098520,7101679..7101810,7104781..7104908,7105950..7106202,7108858..7109099,7120000..7120185,7126073..7126652,7128935..7129041,7129267..7129393,7138148..7138332,7141567..7141873,7145219..7145295,7147984..7148109,7150060..7150260,7152541..7152621,7152714..7152818,7159217..7159404,7161381..7162349)
location: region:6964574-7162349:1
so has part: feature:6964574-6964751:1:exon
so has part: feature:7035356-7035452:1:exon
so has part: feature:7088783-7089111:1:exon
so has part: feature:7090189-7090383:1:exon
so has part: feature:7095315-7095519:1:exon
so has part: feature:7096474-7096559:1:exon
so has part: feature:7098417-7098520:1:exon
so has part: feature:7101679-7101810:1:exon
so has part: feature:7104781-7104908:1:exon
so has part: feature:7105950-7106202:1:exon
so has part: feature:7108858-7109099:1:exon
so has part: feature:7120000-7120185:1:exon
so has part: feature:7126073-7126652:1:exon
so has part: feature:7128935-7129041:1:exon
so has part: feature:7129267-7129393:1:exon
so has part: feature:7138148-7138332:1:exon
so has part: feature:7141567-7141873:1:exon
so has part: feature:7145219-7145295:1:exon
so has part: feature:7147984-7148109:1:exon
so has part: feature:7150060-7150260:1:exon
so has part: feature:7152541-7152621:1:exon
so has part: feature:7152714-7152818:1:exon
so has part: feature:7159217-7159404:1:exon
so has part: feature:7161381-7162349:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6964574-6964751:1:exon

position:6964751:1
position: 6964751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7035356-7035452:1:exon

position:7035356:1
position: 7035356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7035452:1
position: 7035452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7088783-7089111:1:exon

position:7088783:1
position: 7088783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7089111:1
position: 7089111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7090189-7090383:1:exon

position:7090189:1
position: 7090189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7090383:1
position: 7090383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7095315-7095519:1:exon

position:7095315:1
position: 7095315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7095519:1
position: 7095519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7096474-7096559:1:exon

position:7096474:1
position: 7096474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7096559:1
position: 7096559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7098417-7098520:1:exon

position:7098417:1
position: 7098417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7098520:1
position: 7098520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7101679-7101810:1:exon

position:7101679:1
position: 7101679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7101810:1
position: 7101810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7104781-7104908:1:exon

position:7104781:1
position: 7104781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7104908:1
position: 7104908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7105950-7106202:1:exon

position:7105950:1
position: 7105950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7106202:1
position: 7106202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7108858-7109099:1:exon

position:7108858:1
position: 7108858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7109099:1
position: 7109099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7120000-7120185:1:exon

position:7120000:1
position: 7120000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7120185:1
position: 7120185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7126073-7126652:1:exon

position:7126073:1
position: 7126073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7126652:1
position: 7126652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7128935-7129041:1:exon

position:7128935:1
position: 7128935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7129041:1
position: 7129041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7129267-7129393:1:exon

position:7129267:1
position: 7129267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7129393:1
position: 7129393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7138148-7138332:1:exon

position:7138148:1
position: 7138148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7138332:1
position: 7138332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7141567-7141873:1:exon

position:7141567:1
position: 7141567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7141873:1
position: 7141873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7145219-7145295:1:exon

position:7145219:1
position: 7145219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7145295:1
position: 7145295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:7147984-7148109:1:exon

position:7147984:1
position: 7147984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7148109:1
position: 7148109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:7150060-7150260:1:exon

position:7150060:1
position: 7150060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7150260:1
position: 7150260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:7152541-7152621:1:exon

position:7152541:1
position: 7152541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7152621:1
position: 7152621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:7152714-7152818:1:exon

position:7152714:1
position: 7152714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7152818:1
position: 7152818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:7159217-7159404:1:exon

position:7159217:1
position: 7159217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7159404:1
position: 7159404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:7161381-7162349:1:exon

position:7161381:1
position: 7161381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116978242
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116978242
product: probable phospholipid-transporting ATPase VB, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033029241.1
SIO_010081: LOC116978242
subclass of: SO_0000673
so part of: LOC116978242
location: join(7035155..7035452,7088783..7089111,7090189..7090383,7095315..7095519,7096474..7096559,7098417..7098520,7101679..7101810,7104781..7104908,7105950..7106202,7108858..7109099,7120000..7120185,7126073..7126652,7128935..7129041,7129267..7129393,7138148..7138332,7141567..7141873,7145219..7145295,7147984..7148109,7150060..7150260,7152541..7152621,7152714..7152818,7159217..7159404,7161381..7162349)
location: region:7035155-7162349:1
so has part: feature:7035155-7035452:1:exon
so has part: feature:7088783-7089111:1:exon
so has part: feature:7090189-7090383:1:exon
so has part: feature:7095315-7095519:1:exon
so has part: feature:7096474-7096559:1:exon
so has part: feature:7098417-7098520:1:exon
so has part: feature:7101679-7101810:1:exon
so has part: feature:7104781-7104908:1:exon
so has part: feature:7105950-7106202:1:exon
so has part: feature:7108858-7109099:1:exon
so has part: feature:7120000-7120185:1:exon
so has part: feature:7126073-7126652:1:exon
so has part: feature:7128935-7129041:1:exon
so has part: feature:7129267-7129393:1:exon
so has part: feature:7138148-7138332:1:exon
so has part: feature:7141567-7141873:1:exon
so has part: feature:7145219-7145295:1:exon
so has part: feature:7147984-7148109:1:exon
so has part: feature:7150060-7150260:1:exon
so has part: feature:7152541-7152621:1:exon
so has part: feature:7152714-7152818:1:exon
so has part: feature:7159217-7159404:1:exon
so has part: feature:7161381-7162349:1:exon

position:7035155:1
position: 7035155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7035155-7035452:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7088783-7089111:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7090189-7090383:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7095315-7095519:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7096474-7096559:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7098417-7098520:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7101679-7101810:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7104781-7104908:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7105950-7106202:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7108858-7109099:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7120000-7120185:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7126073-7126652:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7128935-7129041:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7129267-7129393:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7138148-7138332:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7141567-7141873:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7145219-7145295:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7147984-7148109:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7150060-7150260:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7152541-7152621:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7152714-7152818:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7159217-7159404:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7161381-7162349:1:exon

LOC116978242
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116978242
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable phospholipid-transporting ATPase VB
translation: MAHTIEWIRFRFQGQRRSSLSETTPLLSSPPLNSPAKGQRSPTLTKQRIIIPNNRMLSKDLERQMRNYTSNKITTRKYTIINFLPKNFIEQCKRFANVYFLLLAFLNWIPSIEVFHKEITMLPIIIVMSVTAIKDGVEDFKRYQFDKKINETMTRVFDWKQRRYVEKYWKDVYVGDFVLLSCNEIIPADILLLHSSEQNGICYIETSNLDGETNLKQRLAVKGFSNPDSEFEPMNFNNTIVCENPNNDLNKFKGFVNKSEEKIGFDKESLLIRGCTIRNTNVTVGIVVYAGHETKAMLNNNGPRSKQSKLERKMNVDVVWCMILMVVMCLVGAIGHRIWVGNFNSWPPFELPEQSFSFIASAASLLHTFLTMVILLQVLIPISLYVSIELAKLGQIFFICNDVELYDERTGTRLECRALNITEDLGQIQYIFSDKTGTLTENKMAFRLCTIMGTEYQHDKNTERLSTRTQTAISDEEGPLLEGSVSINNPQNGASDHRQKSPMLTGQPQSILSRQQRTDCTSQTKSMMHCGPSQRGTWNNSIEKDIVPDEGLLKRIRGAVAHMESPTQLNAGTGLESACIIDFFLALTMCNTVMVSTATQPRQPVPTSSLSKSSTEPLSKMHQVLQKLKTARKTSTCLPSHPSSCSPGSLCNEPLLSPNVSPSSSCDAGNAEGDVGSGADGIDNLSVTAEAGRNIGGEGEDIVDEDIYYEAESPDEAALVHAARAYSFTLFSRTPDQVTIKLPHGGLLSFELLHTLAFDSTRKRMSVIVKHPLTKEIVVYTKGADSVIMDLLEHVGKDDLEEQEKHRRITEETQRHLDRYASSGLRTLCVAKKVLTDGEYVKWARLRHEAETSIEQREPLMMETALRLETNLKLLGATAVEDCLQDGVPSTIAAFREAGIVTWVLTGDKQETAVYIAYACKLLHPNDVIFTLNSEHQDICEALLDCILDEVGKYNGLDCATSKLTAIFAPTSSSPLKPSFGLVIDGKTLSVIFQGNLQKKFLEVAKCCQSVVCCRSTPRQKSMVVELVRDRLKAMTLAIGDGSNDVSMIQAADVGIGITGQEGMQAVMASDFAISHFKYLRKLLLVHGHWCHRRLANMIIYYFYKNVAYVNLLFWYQFYCGFSGSSMIDYWLMIFFNLLFTSLPPLTCGILDKDVSAEMLLEFPELYRSCQRSGAYNHWSFWITMLDAFYQSLVCFFVPYFTYQGSNIDIFTFGTPMNTLSLFTILAHLAIETKTWTWLHWVSTIGSIAFYFLITLVYSAVCVTCNSPSDPYWIIQRQMTDPLFYLVCLITPILALLPRYLIRSLQGTLFSSPLLKARQLDNLDKVQQFQAIRVWKGLDNSGNDMPNLTESTDQSREEHANNPSAVTSNPASQFVSVPVGIAEIRSSVNRV
SIO_010081: LOC116978242
subclass of: SO_0000673
so part of: LOC116978242
location: join(7088831..7089111,7090189..7090383,7095315..7095519,7096474..7096559,7098417..7098520,7101679..7101810,7104781..7104908,7105950..7106202,7108858..7109099,7120000..7120185,7126073..7126652,7128935..7129041,7129267..7129393,7138148..7138332,7141567..7141873,7145219..7145295,7147984..7148109,7150060..7150260,7152541..7152621,7152714..7152818,7159217..7159404,7161381..7161660)
location: region:7088831-7161660:1
so has part: feature:7088831-7089111:1:exon
so has part: feature:7090189-7090383:1:exon
so has part: feature:7095315-7095519:1:exon
so has part: feature:7096474-7096559:1:exon
so has part: feature:7098417-7098520:1:exon
so has part: feature:7101679-7101810:1:exon
so has part: feature:7104781-7104908:1:exon
so has part: feature:7105950-7106202:1:exon
so has part: feature:7108858-7109099:1:exon
so has part: feature:7120000-7120185:1:exon
so has part: feature:7126073-7126652:1:exon
so has part: feature:7128935-7129041:1:exon
so has part: feature:7129267-7129393:1:exon
so has part: feature:7138148-7138332:1:exon
so has part: feature:7141567-7141873:1:exon
so has part: feature:7145219-7145295:1:exon
so has part: feature:7147984-7148109:1:exon
so has part: feature:7150060-7150260:1:exon
so has part: feature:7152541-7152621:1:exon
so has part: feature:7152714-7152818:1:exon
so has part: feature:7159217-7159404:1:exon
so has part: feature:7161381-7161660:1:exon

XP_032885131.1
type: Protein
SIO_000068: ncbiprotein

position:7088831:1
position: 7088831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7161660:1
position: 7161660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7088831-7089111:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7090189-7090383:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7095315-7095519:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7096474-7096559:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7098417-7098520:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7101679-7101810:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7104781-7104908:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7105950-7106202:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7108858-7109099:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7120000-7120185:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7126073-7126652:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7128935-7129041:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7129267-7129393:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7138148-7138332:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7141567-7141873:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7145219-7145295:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7147984-7148109:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7150060-7150260:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7152541-7152621:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7152714-7152818:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7159217-7159404:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7161381-7161660:1:exon

LOC116978242
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116978242
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable phospholipid-transporting ATPase VB
translation: MAHTIEWIRFRFQGQRRSSLSETTPLLSSPPLNSPAKGQRSPTLTKQRIIIPNNRMLSKDLERQMRNYTSNKITTRKYTIINFLPKNFIEQCKRFANVYFLLLAFLNWIPSIEVFHKEITMLPIIIVMSVTAIKDGVEDFKRYQFDKKINETMTRVFDWKQRRYVEKYWKDVYVGDFVLLSCNEIIPADILLLHSSEQNGICYIETSNLDGETNLKQRLAVKGFSNPDSEFEPMNFNNTIVCENPNNDLNKFKGFVNKSEEKIGFDKESLLIRGCTIRNTNVTVGIVVYAGHETKAMLNNNGPRSKQSKLERKMNVDVVWCMILMVVMCLVGAIGHRIWVGNFNSWPPFELPEQSFSFIASAASLLHTFLTMVILLQVLIPISLYVSIELAKLGQIFFICNDVELYDERTGTRLECRALNITEDLGQIQYIFSDKTGTLTENKMAFRLCTIMGTEYQHDKNTERLSTRTQTAISDEEGPLLEGSVSINNPQNGASDHRQKSPMLTGQPQSILSRQQRTDCTSQTKSMMHCGPSQRGTWNNSIEKDIVPDEGLLKRIRGAVAHMESPTQLNAGTGLESACIIDFFLALTMCNTVMVSTATQPRQPVPTSSLSKSSTEPLSKMHQVLQKLKTARKTSTCLPSHPSSCSPGSLCNEPLLSPNVSPSSSCDAGNAEGDVGSGADGIDNLSVTAEAGRNIGGEGEDIVDEDIYYEAESPDEAALVHAARAYSFTLFSRTPDQVTIKLPHGGLLSFELLHTLAFDSTRKRMSVIVKHPLTKEIVVYTKGADSVIMDLLEHVGKDDLEEQEKHRRITEETQRHLDRYASSGLRTLCVAKKVLTDGEYVKWARLRHEAETSIEQREPLMMETALRLETNLKLLGATAVEDCLQDGVPSTIAAFREAGIVTWVLTGDKQETAVYIAYACKLLHPNDVIFTLNSEHQDICEALLDCILDEVGKYNGLDCATSKLTAIFAPTSSSPLKPSFGLVIDGKTLSVIFQGNLQKKFLEVAKCCQSVVCCRSTPRQKSMVVELVRDRLKAMTLAIGDGSNDVSMIQAADVGIGITGQEGMQAVMASDFAISHFKYLRKLLLVHGHWCHRRLANMIIYYFYKNVAYVNLLFWYQFYCGFSGSSMIDYWLMIFFNLLFTSLPPLTCGILDKDVSAEMLLEFPELYRSCQRSGAYNHWSFWITMLDAFYQSLVCFFVPYFTYQGSNIDIFTFGTPMNTLSLFTILAHLAIETKTWTWLHWVSTIGSIAFYFLITLVYSAVCVTCNSPSDPYWIIQRQMTDPLFYLVCLITPILALLPRYLIRSLQGTLFSSPLLKARQLDNLDKVQQFQAIRVWKGLDNSGNDMPNLTESTDQSREEHANNPSAVTSNPASQFVSVPVGIAEIRSSVNRV
SIO_010081: LOC116978242
subclass of: SO_0000673
so part of: LOC116978242
location: join(7088831..7089111,7090189..7090383,7095315..7095519,7096474..7096559,7098417..7098520,7101679..7101810,7104781..7104908,7105950..7106202,7108858..7109099,7120000..7120185,7126073..7126652,7128935..7129041,7129267..7129393,7138148..7138332,7141567..7141873,7145219..7145295,7147984..7148109,7150060..7150260,7152541..7152621,7152714..7152818,7159217..7159404,7161381..7161660)
location: region:7088831-7161660:1
so has part: feature:7088831-7089111:1:exon
so has part: feature:7090189-7090383:1:exon
so has part: feature:7095315-7095519:1:exon
so has part: feature:7096474-7096559:1:exon
so has part: feature:7098417-7098520:1:exon
so has part: feature:7101679-7101810:1:exon
so has part: feature:7104781-7104908:1:exon
so has part: feature:7105950-7106202:1:exon
so has part: feature:7108858-7109099:1:exon
so has part: feature:7120000-7120185:1:exon
so has part: feature:7126073-7126652:1:exon
so has part: feature:7128935-7129041:1:exon
so has part: feature:7129267-7129393:1:exon
so has part: feature:7138148-7138332:1:exon
so has part: feature:7141567-7141873:1:exon
so has part: feature:7145219-7145295:1:exon
so has part: feature:7147984-7148109:1:exon
so has part: feature:7150060-7150260:1:exon
so has part: feature:7152541-7152621:1:exon
so has part: feature:7152714-7152818:1:exon
so has part: feature:7159217-7159404:1:exon
so has part: feature:7161381-7161660:1:exon

XP_032885132.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7088831-7089111:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7090189-7090383:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7095315-7095519:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7096474-7096559:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7098417-7098520:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7101679-7101810:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7104781-7104908:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7105950-7106202:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7108858-7109099:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7120000-7120185:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7126073-7126652:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7128935-7129041:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7129267-7129393:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7138148-7138332:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7141567-7141873:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7145219-7145295:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7147984-7148109:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7150060-7150260:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7152541-7152621:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7152714-7152818:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7159217-7159404:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7161381-7161660:1:exon

LOC116978243
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116978243
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7128083..7146750)
location: region:7128083-7146750:-1
so has part: feature:7128083-7146750:-1:exon
subclass of: SO_0000011

116978243
type: Gene
SIO_000068: ncbigene

position:7128083:-1
position: 7128083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7146750:-1
position: 7146750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7128083-7146750:-1:exon

LOC116978243
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116978243
product: uncharacterized LOC116978243
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004413424.1
SIO_010081: LOC116978243
subclass of: SO_0000673
so part of: LOC116978243
location: complement(join(7128083..7128094,7144311..7144315,7146634..7146750))
location: region:7128083-7146750:-1
so has part: feature:7146634-7146750:-1:exon
so has part: feature:7144311-7144315:-1:exon
so has part: feature:7128083-7128094:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7146634-7146750:-1:exon

position:7146634:-1
position: 7146634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7144311-7144315:-1:exon

position:7144311:-1
position: 7144311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7144315:-1
position: 7144315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7128083-7128094:-1:exon

position:7128094:-1
position: 7128094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116978244
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116978244
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7214901..7303178
location: region:7214901-7303178:1
so has part: feature:7214901-7303178:1:exon
subclass of: SO_0000010

116978244
type: Gene
SIO_000068: ncbigene

position:7214901:1
position: 7214901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7303178:1
position: 7303178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7214901-7303178:1:exon

LOC116978244
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116978244
product: uncharacterized LOC116978244, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033029243.1
SIO_010081: LOC116978244
subclass of: SO_0000673
so part of: LOC116978244
location: join(7214901..7215165,7221867..7221899,7222724..7222833,7228854..7228986,7234589..7234755,7241345..7241417,7251873..7252299,7255074..7255188,7260622..7260671,7267025..7267167,7270111..7270187,7272969..7273015,7277496..7277610,7277703..7277804,7285129..7285335,7292555..7292604,7296844..7296950,7302984..7303178)
location: region:7214901-7303178:1
so has part: feature:7214901-7215165:1:exon
so has part: feature:7221867-7221899:1:exon
so has part: feature:7222724-7222833:1:exon
so has part: feature:7228854-7228986:1:exon
so has part: feature:7234589-7234755:1:exon
so has part: feature:7241345-7241417:1:exon
so has part: feature:7251873-7252299:1:exon
so has part: feature:7255074-7255188:1:exon
so has part: feature:7260622-7260671:1:exon
so has part: feature:7267025-7267167:1:exon
so has part: feature:7270111-7270187:1:exon
so has part: feature:7272969-7273015:1:exon
so has part: feature:7277496-7277610:1:exon
so has part: feature:7277703-7277804:1:exon
so has part: feature:7285129-7285335:1:exon
so has part: feature:7292555-7292604:1:exon
so has part: feature:7296844-7296950:1:exon
so has part: feature:7302984-7303178:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7214901-7215165:1:exon

position:7215165:1
position: 7215165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7221867-7221899:1:exon

position:7221867:1
position: 7221867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7221899:1
position: 7221899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7222724-7222833:1:exon

position:7222724:1
position: 7222724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7222833:1
position: 7222833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7228854-7228986:1:exon

position:7228854:1
position: 7228854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7228986:1
position: 7228986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7234589-7234755:1:exon

position:7234589:1
position: 7234589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7234755:1
position: 7234755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7241345-7241417:1:exon

position:7241345:1
position: 7241345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7241417:1
position: 7241417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7251873-7252299:1:exon

position:7251873:1
position: 7251873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7252299:1
position: 7252299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7255074-7255188:1:exon

position:7255074:1
position: 7255074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7255188:1
position: 7255188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7260622-7260671:1:exon

position:7260622:1
position: 7260622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7260671:1
position: 7260671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7267025-7267167:1:exon

position:7267025:1
position: 7267025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7267167:1
position: 7267167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7270111-7270187:1:exon

position:7270111:1
position: 7270111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7270187:1
position: 7270187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7272969-7273015:1:exon

position:7272969:1
position: 7272969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7273015:1
position: 7273015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7277496-7277610:1:exon

position:7277496:1
position: 7277496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7277610:1
position: 7277610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7277703-7277804:1:exon

position:7277703:1
position: 7277703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7277804:1
position: 7277804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7285129-7285335:1:exon

position:7285129:1
position: 7285129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7285335:1
position: 7285335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7292555-7292604:1:exon

position:7292555:1
position: 7292555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7292604:1
position: 7292604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7296844-7296950:1:exon

position:7296844:1
position: 7296844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7296950:1
position: 7296950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7302984-7303178:1:exon

position:7302984:1
position: 7302984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116978244
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116978244
product: uncharacterized LOC116978244, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033029242.1
SIO_010081: LOC116978244
subclass of: SO_0000673
so part of: LOC116978244
location: join(7214930..7215165,7220515..7220541,7221867..7221899,7222724..7222833,7228854..7228986,7234589..7234755,7241345..7241417,7251873..7252299,7255074..7255188,7260616..7260671,7267025..7267167,7270111..7270187,7272969..7273015,7277496..7277610,7277703..7277804,7285129..7285335,7292555..7292604,7296844..7296950,7302984..7303178)
location: region:7214930-7303178:1
so has part: feature:7214930-7215165:1:exon
so has part: feature:7220515-7220541:1:exon
so has part: feature:7221867-7221899:1:exon
so has part: feature:7222724-7222833:1:exon
so has part: feature:7228854-7228986:1:exon
so has part: feature:7234589-7234755:1:exon
so has part: feature:7241345-7241417:1:exon
so has part: feature:7251873-7252299:1:exon
so has part: feature:7255074-7255188:1:exon
so has part: feature:7260616-7260671:1:exon
so has part: feature:7267025-7267167:1:exon
so has part: feature:7270111-7270187:1:exon
so has part: feature:7272969-7273015:1:exon
so has part: feature:7277496-7277610:1:exon
so has part: feature:7277703-7277804:1:exon
so has part: feature:7285129-7285335:1:exon
so has part: feature:7292555-7292604:1:exon
so has part: feature:7296844-7296950:1:exon
so has part: feature:7302984-7303178:1:exon

position:7214930:1
position: 7214930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7214930-7215165:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7220515-7220541:1:exon

position:7220515:1
position: 7220515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7220541:1
position: 7220541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7221867-7221899:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7222724-7222833:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7228854-7228986:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7234589-7234755:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7241345-7241417:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7251873-7252299:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7255074-7255188:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7260616-7260671:1:exon

position:7260616:1
position: 7260616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7267025-7267167:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7270111-7270187:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7272969-7273015:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7277496-7277610:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7277703-7277804:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7285129-7285335:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7292555-7292604:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7296844-7296950:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7302984-7303178:1:exon

LOC116978244
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116978244
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116978244 isoform X1
translation: MSAWKPLPLNIKSQNSLAAKGFRSVRPKFLTCDRKPALQQNGKVDTKERNDNTRTEDCLSSHLPNQETPSMRAQSSIPRDNETDFKDKEVNTSDSEMDLHPVYKITLQTAGQQMTTANVLPATSAITSEKGASSLITEKVPSEVMPKAWYISMFKDDHTIQKADDDGWSSNTEARLEPNATKQSFPSSAVVLTSRLTEPFPYNSTTKDKCTIKMPFLSDPQRNSDDEMQNCNTQSQCLQPKSSDAQRDQNGSNPLSANSLDSTGWNCQNYAPSSDRQHTSSMEILSSSLTAKELHPHFSTTANPEKNDWALHMGNIDTCSGHAEAGNVRVYEGGKSSVSHHSCQFQTSTQNATSVDSVLHRTGSVPALEATTRHLTILDPVRHTSPGTDTDPCSEIRRDSTNLNSVDIENDTNLNRENQKQKRQEEISDPEHQRNMEWITRAKYDFHGQTSKELAVKKGDSVFIHRQRDNNWFVAECKGNRGLLPVCYVESPSEFQPHGNTIDEVAVAKFRFAALTNIELPLEKNQMVILLRRIDENWYEGKAPGTDRKGIFPVTYVEVIGKQPGDHMCHRDHTPTPASHLNTEVASQRSLHQLHQRRVNYDNAQLGEEIYLALYSFVPKKLDELELRQGDHVKVIKKCDDGWYLGTSIRTKKFGTFPGNYVRKFESV
SIO_010081: LOC116978244
subclass of: SO_0000673
so part of: LOC116978244
location: join(7221893..7221899,7222724..7222833,7228854..7228986,7234589..7234755,7241345..7241417,7251873..7252299,7255074..7255188,7260616..7260671,7267025..7267167,7270111..7270187,7272969..7273015,7277496..7277610,7277703..7277804,7285129..7285335,7292555..7292604,7296844..7296950,7302984..7303054)
location: region:7221893-7303054:1
so has part: feature:7221893-7221899:1:exon
so has part: feature:7222724-7222833:1:exon
so has part: feature:7228854-7228986:1:exon
so has part: feature:7234589-7234755:1:exon
so has part: feature:7241345-7241417:1:exon
so has part: feature:7251873-7252299:1:exon
so has part: feature:7255074-7255188:1:exon
so has part: feature:7260616-7260671:1:exon
so has part: feature:7267025-7267167:1:exon
so has part: feature:7270111-7270187:1:exon
so has part: feature:7272969-7273015:1:exon
so has part: feature:7277496-7277610:1:exon
so has part: feature:7277703-7277804:1:exon
so has part: feature:7285129-7285335:1:exon
so has part: feature:7292555-7292604:1:exon
so has part: feature:7296844-7296950:1:exon
so has part: feature:7302984-7303054:1:exon

XP_032885133.1
type: Protein
SIO_000068: ncbiprotein

position:7221893:1
position: 7221893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7303054:1
position: 7303054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7221893-7221899:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7222724-7222833:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7228854-7228986:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7234589-7234755:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7241345-7241417:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7251873-7252299:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7255074-7255188:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7260616-7260671:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7267025-7267167:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7270111-7270187:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7272969-7273015:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7277496-7277610:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7277703-7277804:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7285129-7285335:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7292555-7292604:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7296844-7296950:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7302984-7303054:1:exon

LOC116978244
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116978244
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116978244 isoform X2
translation: MSAWKPLPLNIKSQNSLAAKGFRSVRPKFLTCDRKPALQQNGKVDTKERNDNTRTEDCLSSHLPNQETPSMRAQSSIPRDNETDFKDKEVNTSDSEMDLHPVYKITLQTAGQQMTTANVLPATSAITSEKGASSLITEKVPSEVMPKAWYISMFKDDHTIQKADDDGWSSNTEARLEPNATKQSFPSSAVVLTSRLTEPFPYNSTTKDKCTIKMPFLSDPQRNSDDEMQNCNTQSQCLQPKSSDAQRDQNGSNPLSANSLDSTGWNCQNYAPSSDRQHTSSMEILSSSLTAKELHPHFSTTANPEKNDWALHMGNIDTCSGHAEAGNVRVYEGGKSSVSHHSCQTSTQNATSVDSVLHRTGSVPALEATTRHLTILDPVRHTSPGTDTDPCSEIRRDSTNLNSVDIENDTNLNRENQKQKRQEEISDPEHQRNMEWITRAKYDFHGQTSKELAVKKGDSVFIHRQRDNNWFVAECKGNRGLLPVCYVESPSEFQPHGNTIDEVAVAKFRFAALTNIELPLEKNQMVILLRRIDENWYEGKAPGTDRKGIFPVTYVEVIGKQPGDHMCHRDHTPTPASHLNTEVASQRSLHQLHQRRVNYDNAQLGEEIYLALYSFVPKKLDELELRQGDHVKVIKKCDDGWYLGTSIRTKKFGTFPGNYVRKFESV
SIO_010081: LOC116978244
subclass of: SO_0000673
so part of: LOC116978244
location: join(7221893..7221899,7222724..7222833,7228854..7228986,7234589..7234755,7241345..7241417,7251873..7252299,7255074..7255188,7260622..7260671,7267025..7267167,7270111..7270187,7272969..7273015,7277496..7277610,7277703..7277804,7285129..7285335,7292555..7292604,7296844..7296950,7302984..7303054)
location: region:7221893-7303054:1
so has part: feature:7221893-7221899:1:exon
so has part: feature:7222724-7222833:1:exon
so has part: feature:7228854-7228986:1:exon
so has part: feature:7234589-7234755:1:exon
so has part: feature:7241345-7241417:1:exon
so has part: feature:7251873-7252299:1:exon
so has part: feature:7255074-7255188:1:exon
so has part: feature:7260622-7260671:1:exon
so has part: feature:7267025-7267167:1:exon
so has part: feature:7270111-7270187:1:exon
so has part: feature:7272969-7273015:1:exon
so has part: feature:7277496-7277610:1:exon
so has part: feature:7277703-7277804:1:exon
so has part: feature:7285129-7285335:1:exon
so has part: feature:7292555-7292604:1:exon
so has part: feature:7296844-7296950:1:exon
so has part: feature:7302984-7303054:1:exon

XP_032885134.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7221893-7221899:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7222724-7222833:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7228854-7228986:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7234589-7234755:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7241345-7241417:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7251873-7252299:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7255074-7255188:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7260622-7260671:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7267025-7267167:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7270111-7270187:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7272969-7273015:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7277496-7277610:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7277703-7277804:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7285129-7285335:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7292555-7292604:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7296844-7296950:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7302984-7303054:1:exon

LOC116978834
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116978834
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 7272305..7272411
location: region:7272305-7272411:1
so has part: feature:7272305-7272411:1:exon
subclass of: SO_0000623

116978834
type: Gene
SIO_000068: ncbigene

position:7272305:1
position: 7272305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7272411:1
position: 7272411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7272305-7272411:1:exon

LOC116978834
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: snRNA
gene: LOC116978834
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004413576.1
SIO_010081: LOC116978834
subclass of: SO_0000673
so part of: LOC116978834
location: 7272305..7272411
location: region:7272305-7272411:1
so has part: feature:7272305-7272411:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7272305-7272411:1:exon

LOC116978246
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116978246
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7322857..7391943
location: region:7322857-7391943:1
so has part: feature:7322857-7391943:1:exon
subclass of: SO_0000010

116978246
type: Gene
SIO_000068: ncbigene

position:7322857:1
position: 7322857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7391943:1
position: 7391943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7322857-7391943:1:exon

LOC116978246
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116978246
product: PDZ and LIM domain protein 4-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_033029244.1
SIO_010081: LOC116978246
subclass of: SO_0000673
so part of: LOC116978246
location: join(7322857..7323060,7342981..7343132,7366196..7366280,7381379..7381563,7387997..7388154,7388973..7389093,7390521..7391943)
location: region:7322857-7391943:1
so has part: feature:7322857-7323060:1:exon
so has part: feature:7342981-7343132:1:exon
so has part: feature:7366196-7366280:1:exon
so has part: feature:7381379-7381563:1:exon
so has part: feature:7387997-7388154:1:exon
so has part: feature:7388973-7389093:1:exon
so has part: feature:7390521-7391943:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7322857-7323060:1:exon

position:7323060:1
position: 7323060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7342981-7343132:1:exon

position:7342981:1
position: 7342981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7343132:1
position: 7343132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7366196-7366280:1:exon

position:7366196:1
position: 7366196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7366280:1
position: 7366280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7381379-7381563:1:exon

position:7381379:1
position: 7381379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7381563:1
position: 7381563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7387997-7388154:1:exon

position:7387997:1
position: 7387997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7388154:1
position: 7388154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7388973-7389093:1:exon

position:7388973:1
position: 7388973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7389093:1
position: 7389093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7390521-7391943:1:exon

position:7390521:1
position: 7390521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116978246
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116978246
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PDZ and LIM domain protein 4-like isoform X1
translation: MPHPVTLYGPSPWGFRLVGGKDYSQPLTISRVTPGSKASSANLCPGDIIVAINDDSTENMSHLDAQNKIKACMDQLTLSINRNENKPWSPNGIEDGSTRPFENSLQAQPQECRATGSPTSRKPAPFTMSTNVNEGRQLANAQYNTPAALYTNDNIDHSLPEQLSGLHVASPHIESPKLSPKLWNEVDTESDVYKMLRDGEEPPSEPKQSGSFKMLQGMLEAEQTGERSERPTAIKSIKSPVTKFSNAPPTLQRLPHCTRCETAIVGAVIKAREKIYHPACFMCSDCGLNLKQKGYFFIEEQLYCETHAKARVQPPEGYEVVAVYPNSRV
SIO_010081: LOC116978246
subclass of: SO_0000673
so part of: LOC116978246
location: join(7322968..7323060,7342981..7343132,7366196..7366280,7381379..7381563,7387997..7388154,7388973..7389093,7390521..7390716)
location: region:7322968-7390716:1
so has part: feature:7322968-7323060:1:exon
so has part: feature:7342981-7343132:1:exon
so has part: feature:7366196-7366280:1:exon
so has part: feature:7381379-7381563:1:exon
so has part: feature:7387997-7388154:1:exon
so has part: feature:7388973-7389093:1:exon
so has part: feature:7390521-7390716:1:exon