Bartonella tribocorum CIP 105476 plasmid pBT01, complete sequence.
type: Entry
definition: Bartonella tribocorum CIP 105476 plasmid pBT01, complete sequence.
sequence version: NC_010160.1
sequence date: 2023-04-24
sequence: sequence
division: CON
label: NC_010160.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMEA3138339
keyword: RefSeq
keyword: complete genome
source: Bartonella tribocorum CIP 105476
organism: Bartonella tribocorum CIP 105476
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Bartonellaceae; Bartonella.
reference: 1
references: 18037886
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nAM260524.1.\nClone requests: scs@bx.psu.edu.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/24/2023 00:58:03\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,332\nCDSs (total) :: 2,280\nGenes (coding) :: 2,167\nCDSs (with protein) :: 2,167\nGenes (RNA) :: 52\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 42\nncRNAs :: 4\nPseudo Genes (total) :: 113\nCDSs (without protein) :: 113\nPseudo Genes (ambiguous residues) :: 0 of 113\nPseudo Genes (frameshifted) :: 70 of 113\nPseudo Genes (incomplete) :: 71 of 113\nPseudo Genes (internal stop) :: 43 of 113\nPseudo Genes (multiple problems) :: 53 of 113\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 23343
topology: circular
so has quality: SO_0000988
location: 1..23343
location: region:1-23343:1
RO_0002162: 382640

NC_010160
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMEA3138339
type: BioSample
SIO_000068: biosample

1
title: Genomic analysis of Bartonella identifies type IV secretion systems as host adaptability factors
author: Saenz, H.L.
author: Engel, P.
author: Stoeckli, M.C.
author: Lanz, C.
author: Raddatz, G.
author: Vayssier-Taussat, M.
author: Birtles, R.
author: Schuster, S.C.
author: Dehio, C.
journal: Nat Genet
volume: 39
issue: 12
pages: 1469-1476
year: 2007
pubmed: 18037886

18037886
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Schuster, S.C.
journal: Submitted (30-MAR-2006) Schuster S.C., Department of Biochemistry and Molecular Biology, Center for Comparative Genomics and Bioinformatics Center for Infectious Disease Dynamics, 310 Wartik Building, Penn State University, University Park, PA 16802, USA Phone +1 814 863-9278, FAX +1 814 863-6699

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23343:1
position: 23343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-23343:1:source
so part of: sequence
organism: Bartonella tribocorum CIP 105476
mol type: genomic DNA
strain: type strain:506 = CIP 105476
culture collection: CIP:105476
type material: type strain of Bartonella tribocorum
plasmid: pBT01

382640
type: Taxonomy
SIO_000068: taxonomy

BTR_RS00005
type: Gene
subclass of: SO_0000704
RO_0002162: 382640
locus tag: BTR_RS00005
old locus tag: pBT01_0001
old locus tag: PlasmidBtr_0001
so part of: sequence
location: 148..792
location: region:148-792:1
so has part: feature:148-792:1:exon
subclass of: SO_0000010

position:148:1
position: 148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:792:1
position: 792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148-792:1:exon

BTR_RS00005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 382640
locus tag: BTR_RS00005
old locus tag: pBT01_0001
old locus tag: PlasmidBtr_0001
function: Site-specific recombinases, DNA invertase Pin homologs
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012230203.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MTKFYAYLRVSRDGQDTENQKFGLLKYANKHGFAPLHIEEEIASRGKDWRKRKLGALIEKAERGDVLLTPEFSRIAGSSLAVLEILKAASERGLIFHVTKQNLIMDGSLQSDIIATVLGMVAQIERHLIQTRTKEALSVARQRGIKLGRPKGSTATQLKLDNHIDEIQAFINVGLSQNRIAKTLGVSVNTLRLFIERKNIKLTKMKPIITMPRT
SIO_010081: BTR_RS00005
subclass of: SO_0000673
so part of: BTR_RS00005
location: 148..792
location: region:148-792:1
so has part: feature:148-792:1:exon

WP_012230203.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:148-792:1:exon

BTR_RS00010
type: Gene
subclass of: SO_0000704
RO_0002162: 382640
locus tag: BTR_RS00010
old locus tag: pBT01_0002
old locus tag: PlasmidBtr_0002
so part of: sequence
location: 1010..1678
location: region:1010-1678:1
so has part: feature:1010-1678:1:exon
subclass of: SO_0000010

position:1010:1
position: 1010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1678:1
position: 1678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1010-1678:1:exon

BTR_RS00010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 382640
locus tag: BTR_RS00010
old locus tag: pBT01_0002
old locus tag: PlasmidBtr_0002
function: ATPases involved in chromosome partitioning
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007348022.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MPVISFANSKGGSGKTTSALLLACELAHAKPVTIIDADPRHPITTWSKLPNKPDNLTVITNESEKTILDEIEIASAKDPFVIVDLEGTASRLTSYAISQSDFVIIPMKEQQQDAIAAIEIIKEIHRDMKAVRRVIAYAVLFTQSKVVAKPRTARFISSQFRKNTELDVFETEINERDAFSAIFAIGGSHRNLNPKEVNNLETAISNVEAFVAEVIKKLKQVK
SIO_010081: BTR_RS00010
subclass of: SO_0000673
so part of: BTR_RS00010
location: 1010..1678
location: region:1010-1678:1
so has part: feature:1010-1678:1:exon

WP_012230204.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1010-1678:1:exon

BTR_RS00015
type: Gene
subclass of: SO_0000704
RO_0002162: 382640
locus tag: BTR_RS00015
old locus tag: pBT01_0003
old locus tag: PlasmidBtr_0003
so part of: sequence
location: 1695..1961
location: region:1695-1961:1
so has part: feature:1695-1961:1:exon
subclass of: SO_0000010

position:1695:1
position: 1695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1961:1
position: 1961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1695-1961:1:exon

BTR_RS00015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 382640
locus tag: BTR_RS00015
old locus tag: pBT01_0003
old locus tag: PlasmidBtr_0003
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007348023.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSTERKPLNFSELDDFKPRQAKSALNTVERKEIDKAVTFPSREQSDEAQINIKASIAIINRFKYMAKKERYRHGDFLEILMNAYKQGD
SIO_010081: BTR_RS00015
subclass of: SO_0000673
so part of: BTR_RS00015
location: 1695..1961
location: region:1695-1961:1
so has part: feature:1695-1961:1:exon

WP_012230205.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1695-1961:1:exon

BTR_RS00020
type: Gene
subclass of: SO_0000704
RO_0002162: 382640
locus tag: BTR_RS00020
old locus tag: pBT01_0004
pseudo: true
so part of: sequence
location: complement(2271..3317)
location: region:2271-3317:-1
so has part: feature:2271-3317:-1:exon
subclass of: SO_0000010

position:2271:-1
position: 2271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3317:-1
position: 3317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2271-3317:-1:exon

BTR_RS00020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 382640
locus tag: BTR_RS00020
old locus tag: pBT01_0004
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007348024.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Fic family protein
SIO_010081: BTR_RS00020
subclass of: SO_0000673
so part of: BTR_RS00020
location: complement(2271..3317)
location: region:2271-3317:-1
so has part: feature:2271-3317:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2271-3317:-1:exon

BTR_RS00025
type: Gene
subclass of: SO_0000704
RO_0002162: 382640
locus tag: BTR_RS00025
old locus tag: pBT01_0005
old locus tag: PlasmidBtr_0005
so part of: sequence
location: 3461..3802
location: region:3461-3802:1
so has part: feature:3461-3802:1:exon
subclass of: SO_0000010

position:3461:1
position: 3461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3802:1
position: 3802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3461-3802:1:exon

BTR_RS00025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 382640
locus tag: BTR_RS00025
old locus tag: pBT01_0005
old locus tag: PlasmidBtr_0005
function: Uncharacterized ACR
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007348018.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MQTVIETPAYLISAKEEGVSPEELFNIVSFIAANPDAGDLMQGTGGARKVRFPTKHKGKSGGYRVITFFGGQNIPVFLLDIYSKSSQGNLTKSEKNELKKILIALLDEYKKEK
SIO_010081: BTR_RS00025
subclass of: SO_0000673
so part of: BTR_RS00025
location: 3461..3802
location: region:3461-3802:1
so has part: feature:3461-3802:1:exon

WP_012230207.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3461-3802:1:exon

BTR_RS00030
type: Gene
subclass of: SO_0000704
RO_0002162: 382640
locus tag: BTR_RS00030
old locus tag: pBT01_0006
old locus tag: PlasmidBtr_0006
so part of: sequence
location: 3802..4116
location: region:3802-4116:1
so has part: feature:3802-4116:1:exon
subclass of: SO_0000010

position:4116:1
position: 4116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3802-4116:1:exon

BTR_RS00030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 382640
locus tag: BTR_RS00030
old locus tag: pBT01_0006
old locus tag: PlasmidBtr_0006
function: Predicted transcriptional regulator
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007348019.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MDKKNKAGSRILQGAREALAYAKGEADVTKFGIHIPANVDVKKIRKHIGLTQTQFAARFGFSVGRIRDWEQGRYSIDTSSRLLLSIIENEPEAIDRALKKSLLA
SIO_010081: BTR_RS00030
subclass of: SO_0000673
so part of: BTR_RS00030
location: 3802..4116
location: region:3802-4116:1
so has part: feature:3802-4116:1:exon

WP_012230208.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3802-4116:1:exon

BTR_RS00035
type: Gene
subclass of: SO_0000704
RO_0002162: 382640
gene: repC
locus tag: BTR_RS00035
old locus tag: pBT01_0007
old locus tag: PlasmidBtr_0007
so part of: sequence
location: complement(4249..5553)
location: region:4249-5553:-1
so has part: feature:4249-5553:-1:exon
subclass of: SO_0000010

position:4249:-1
position: 4249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5553:-1
position: 5553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4249-5553:-1:exon

BTR_RS00035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 382640
gene: repC
locus tag: BTR_RS00035
old locus tag: pBT01_0007
old locus tag: PlasmidBtr_0007
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007348001.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid replication protein RepC
translation: MVNKVFGRKLSAHHIEYRKLAETAEMGSVSRGQLIGLARKLEMAGLIKETEAKLLLVLLNTASTSSFEKGGVPIVFKSNYCLSNEICRSESRVSILLSSLYDCGLVVMRDSGNFKRYSSRSRSNGIITACGIDLRILVARYHELKQKIDEVLEAQSKQKDALHCFQGLVRQIKASYASIETTPFTSLLFSRMQKIIHIIGRPAKASVGKLHKAIGLFQWILERFLKQKTAKTKYRHFADEMHIEYTTLNLNCNCNKAYEKIEKSKTENTLPSKNSKSLQIKPELLAQALPNVAMFMKHGLQSERDLIGSMEFLATMKGISSHAVESAKKTMGTKKAALAIAIIFEKHCKELVKSSGGYLRGMIAKENRGELYLERSFYALLNEAFEEKLNDWRVQKTEKNDLTKSNDQKSSLFKSELNEVLKTLKMPINSKQFV
SIO_010081: BTR_RS00035
subclass of: SO_0000673
so part of: BTR_RS00035
location: complement(4249..5553)
location: region:4249-5553:-1
so has part: feature:4249-5553:-1:exon

WP_012230211.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4249-5553:-1:exon

BTR_RS00040
type: Gene
subclass of: SO_0000704
RO_0002162: 382640
locus tag: BTR_RS00040
old locus tag: pBT01_0008
old locus tag: PlasmidBtr_0008
so part of: sequence
location: complement(7555..8277)
location: region:7555-8277:-1
so has part: feature:7555-8277:-1:exon
subclass of: SO_0000010

position:7555:-1
position: 7555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8277:-1
position: 8277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7555-8277:-1:exon

BTR_RS00040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 382640
locus tag: BTR_RS00040
old locus tag: pBT01_0008
old locus tag: PlasmidBtr_0008
function: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007346889.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MCKKYELTNQIKQIKDRLTKQITNLYRIRALRDFDDVKAGDLGGFIEDETNLSHDGNCWVYDDATVFCNAVVSDHAKVRHLSQVRGHVYGNAEVYGKALITRYAKVYDHACVYGNAHVAGYIYGNAHVCDHAIIYSNSHIYQHARVSHGVLVHDHAMIYGHSKVSGSACIYNGAKIYGQAIINCHAQIHGSVYGNAKISGFVQVYGRAYGKAKIDLKSHVRVVDQDYEVYEKDNVVKIEK
SIO_010081: BTR_RS00040
subclass of: SO_0000673
so part of: BTR_RS00040
location: complement(7555..8277)
location: region:7555-8277:-1
so has part: feature:7555-8277:-1:exon

WP_012230213.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7555-8277:-1:exon

BTR_RS00045
type: Gene
subclass of: SO_0000704
RO_0002162: 382640
locus tag: BTR_RS00045
old locus tag: pBT01_0009
old locus tag: PlasmidBtr_0009
so part of: sequence
location: complement(8390..8968)
location: region:8390-8968:-1
so has part: feature:8390-8968:-1:exon
subclass of: SO_0000010

position:8390:-1
position: 8390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8968:-1
position: 8968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8390-8968:-1:exon

BTR_RS00045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 382640
locus tag: BTR_RS00045
old locus tag: pBT01_0009
old locus tag: PlasmidBtr_0009
function: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012231657.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQKKFALTNETRVFGNHTLYRIQALKDFSDVKAGASGGFIEKEDNLSHDGNCWVYDDALVFKNGHVYENARVFGKAVACGHIYGHARVYDNAIAAGYIYDNAHVYGNAVVSDNSRVYGNAHVYGKAIIYDNAYVYDNARVYENARIANDVHIYENAHIHGIAVIRENVGGSTKIKTYTERLSPYGELEIVWV
SIO_010081: BTR_RS00045
subclass of: SO_0000673
so part of: BTR_RS00045
location: complement(8390..8968)
location: region:8390-8968:-1
so has part: feature:8390-8968:-1:exon

WP_012230215.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8390-8968:-1:exon

BTR_RS00050
type: Gene
subclass of: SO_0000704
RO_0002162: 382640
locus tag: BTR_RS00050
old locus tag: pBT01_0010
old locus tag: PlasmidBtr_0010
so part of: sequence
location: complement(9051..9824)
location: region:9051-9824:-1
so has part: feature:9051-9824:-1:exon
subclass of: SO_0000010

position:9051:-1
position: 9051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9824:-1
position: 9824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9051-9824:-1:exon

BTR_RS00050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 382640
locus tag: BTR_RS00050
old locus tag: pBT01_0010
old locus tag: PlasmidBtr_0010
function: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012231685.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSTITVSKKYELTNENHTFEGITVHRIRALRDFDDVKAGALGGFIENESNLSHDGNCWVYDNATVFCNAVVSDNAKIRNDAIIARGSKVYGNAVVCDKAWVFGKDASIYDNAKISNNARVCGYVYGNAMVCDNANVSPSAHIYDNARVYENAHVSGFVYGNSHVYGKSRIYGGGCIYGNAHVYGNAWIKSYASIYDDANVSGSARVGSFARIYDNAKVYGKSNIDHDVQIYGNAVVNSREKITNDICDDNQSRKDAA
SIO_010081: BTR_RS00050
subclass of: SO_0000673
so part of: BTR_RS00050
location: complement(9051..9824)
location: region:9051-9824:-1
so has part: feature:9051-9824:-1:exon

WP_012230222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9051-9824:-1:exon

BTR_RS00055
type: Gene
subclass of: SO_0000704
RO_0002162: 382640
locus tag: BTR_RS00055
old locus tag: pBT01_0011
old locus tag: PlasmidBtr_0011
so part of: sequence
location: complement(9907..10569)
location: region:9907-10569:-1
so has part: feature:9907-10569:-1:exon
subclass of: SO_0000010

position:9907:-1
position: 9907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10569:-1
position: 10569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9907-10569:-1:exon

BTR_RS00055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 382640
locus tag: BTR_RS00055
old locus tag: pBT01_0011
old locus tag: PlasmidBtr_0011
function: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012231632.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQKKFALTNETRVFNNQTLYRIRALRDFDDVKAGSLGGFIESENNLSHDGNCWVYDDALVLNPAHIYENAKIFNKAIIMGFVYGNAHVCDHARVYANAHVYDNAHLSYNAWVYHQARVYGNAKLSGSARIHRNAVVYDHAVISGAAKIYGKVYGNASVGCHTDVYGSVYGNAKISSYIVIRGNVYGNARIKRHSGLCSVPINCEVYEGNKVVKIIENNAA
SIO_010081: BTR_RS00055
subclass of: SO_0000673
so part of: BTR_RS00055
location: complement(9907..10569)
location: region:9907-10569:-1
so has part: feature:9907-10569:-1:exon

WP_012230225.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9907-10569:-1:exon

BTR_RS00060
type: Gene
subclass of: SO_0000704
RO_0002162: 382640
locus tag: BTR_RS00060
old locus tag: pBT01_0012
old locus tag: PlasmidBtr_0012
so part of: sequence
location: complement(10651..11292)
location: region:10651-11292:-1
so has part: feature:10651-11292:-1:exon
subclass of: SO_0000010

position:10651:-1
position: 10651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11292:-1
position: 11292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10651-11292:-1:exon

BTR_RS00060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 382640
locus tag: BTR_RS00060
old locus tag: pBT01_0012
old locus tag: PlasmidBtr_0012
function: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012231642.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTNISNNTPLLSNISNETASVNKQQPAKKYEFTGETIEVGFKTLHRIRALRDFGDVKKGELGGFIQGESNLSHDGNCWVGGKAKVYSNARVYDNAVVSGYAHVNNIACIYENARVYGKAVVAGHIYGNAHVYGFARIYPDAHIFGNAHVHYYACVFNDTKIYDNAKISGYACIFPNVKIFRNAVIKGDTWVRNNIEVCNKEIVYNDQSLKNAA
SIO_010081: BTR_RS00060
subclass of: SO_0000673
so part of: BTR_RS00060
location: complement(10651..11292)
location: region:10651-11292:-1
so has part: feature:10651-11292:-1:exon

WP_012230227.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10651-11292:-1:exon

BTR_RS00065
type: Gene
subclass of: SO_0000704
RO_0002162: 382640
locus tag: BTR_RS00065
old locus tag: pBT01_0013
so part of: sequence
location: 13031..13531
location: region:13031-13531:1
so has part: feature:13031-13531:1:exon
subclass of: SO_0000010

position:13031:1
position: 13031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13531:1
position: 13531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13031-13531:1:exon

BTR_RS00065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 382640
locus tag: BTR_RS00065
old locus tag: pBT01_0013
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSISEQKELEDTFEKSLVKYNVQILRGLDLFPPTRNYSYNEKEKIITNKGADALLIVSVDNRAISQTYIPPTYHPGTSTSSISGFGNFATIKTETTPSYVTGGYNISKPAISVSVSLIHNTKNKETIWLAKGYSDGNAFASFSNLIVSVAETTVEKLAKEGLIVPK
SIO_010081: BTR_RS00065
subclass of: SO_0000673
so part of: BTR_RS00065
location: 13031..13531
location: region:13031-13531:1
so has part: feature:13031-13531:1:exon

WP_012230229.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13031-13531:1:exon

BTR_RS00070
type: Gene
subclass of: SO_0000704
RO_0002162: 382640
locus tag: BTR_RS00070
old locus tag: pBT01_0014
old locus tag: PlasmidBtr_0014
so part of: sequence
location: complement(13690..18660)
location: region:13690-18660:-1
so has part: feature:13690-18660:-1:exon
subclass of: SO_0000010

position:13690:-1
position: 13690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18660:-1
position: 18660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13690-18660:-1:exon

BTR_RS00070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 382640
locus tag: BTR_RS00070
old locus tag: pBT01_0014
old locus tag: PlasmidBtr_0014
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005773380.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type ISP restriction/modification enzyme
translation: MLCSHHSDNELVTLRSLLEYYRQQAKSPRELGTMFENLVMVYLSEDPLQKQEYEKVQTYLEWAQEHDEDGTDIGIDLVATIRDEGGYAAIQCKCYDASHIIKKEDIDSFIAASGKKIFTRRILVDSTETDWSDNVELTCEGQEIRPQRINLFDLENSQIDWGAYKEQGQAVLKEKPKKKLLDHQKEALEKVCEGLKEADRGKLIMACGTGKTFTSLKIAEQIAGQGKRVLFLVPSLALISQTIREWTEDTEVPLRSFAVCSDTQVGKRRKNNKNDALEFDSSDLALPATTDAKELASKAGKVSHDLMTVVFSTYHSIQVISDAQKKYDLPEFDLIICDEAHRTTGASLGTEDNESDFIKVHDNSIIQGKKRLYMTATPKIFTDDAKKNADEINAVLASMDDEELYGKELYTYTFSKAVQNELLAPYKIIVLGINEEEVSESIQHLMTDENYELILDDKTKIIGCYQALAKIDLKVDLNDDPNPMRRALAFCKDIKTSKRICKTFNSEEIQKELFNLHKVYKDTPPLHCTFDHIDGTQSAKTRHKALDWLKEDAGENTCRVLTNVRCLSEGVDVPALDAIMFLHPRKSHVDIIQAVGRIMRRARGKKRGYIILPVGVPAGVSAEHALRYNKRYKVVWQVINALLAHDENFEITLNQMILGQDVSDVLEIRALKSMTAVEDKLHIHEKSEHMGLEIGKAAHEPQIIHSVTGRLPFYKEFPNALKTLLAKKFAIADYWENWAGNVAEIAQNHINHLQNLLADENSEAFHAFDAFHKELKNNLNSEIKQEEAIEMLAQHLVTRPVFEALFDGNEFVQNNAISQAMEKILTELDKTNIEEESKELQEFYNSVRLRASGITSPLARQNLIITLYESFFAKAFKKTTDRLGIVYTPVEVIDFIIHSVDDVLRNEFGKSLGSRGVSILDPFTGTGTFITRLLQSDLIKPEDMEYKFRHDIHANEIVLLAYYIAAINIEATYHSIMKGEYIPFKHIGLTDTFRMLEEKNLLQKLFKENSEYLELQKNLNIEVIFGNPPYSVGQKNENDNAKNTPYPILNNRIRETYIAQSKATNVQALYDSYIRAIRWASDRIADAGIIGFVSGSGYIDKSTMDGLRKSLAKEFTSIYVLNLRGDIRKNMLSNGKAEEGENVFGNGSMTGIAITLFIKNPNVSGECKIYYHDIGNNRTIKEKLTALEYFRSIGGITCENGWKVITPDEHGDWINQRDDSFETFLALGNKKGHGKKFFETFSCGLKTNRDAWAYNSSREALAKNMSNMITFYNSEVKRFNNTYAHTDRKIRTNAVNDFVNSDESKISWSRSIKQELAKGKFFEFENAYLTQSLYRPFIQQWLYYNRIFNDMVYQMPRIFPMGQAVENMVIQITGTGTQTVFSALMTKALPNFHAVHTGQCFPRYFYEDTSVLKRKSEKQSHLFTNSTEESKTAGLQKRDAITDEGLAHFKAAYPNETITKDDLFYYVYGILHSEDYRSRYADNLSKELPRIPCVKSADDFWKFVTAGRELGHLHVNYEDVEPYPVTFKKGNPKLTKISNPEKFYYVTEMKFAKIKNSKEKDKSTVFYNSNITITDIPLEAYEYIVNGKPALEWVMGRQCVKTDKKSGIVNDANRYAVETVGNPAYPLELFQRVITVSLETMKIVKNLPKLEIRKTE
SIO_010081: BTR_RS00070
subclass of: SO_0000673
so part of: BTR_RS00070
location: complement(13690..18660)
location: region:13690-18660:-1
so has part: feature:13690-18660:-1:exon

WP_040132227.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13690-18660:-1:exon

BTR_RS00075
type: Gene
subclass of: SO_0000704
RO_0002162: 382640
locus tag: BTR_RS00075
old locus tag: pBT01_0015
old locus tag: PlasmidBtr_0015
so part of: sequence
location: complement(19247..20866)
location: region:19247-20866:-1
so has part: feature:19247-20866:-1:exon
subclass of: SO_0000010

position:19247:-1
position: 19247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20866:-1
position: 20866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19247-20866:-1:exon

BTR_RS00075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 382640
locus tag: BTR_RS00075
old locus tag: pBT01_0015
old locus tag: PlasmidBtr_0015
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007347739.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YfjI family protein
translation: MRENKNNIVDANNQNVSFNDNDNVFFNDKTCLEAIPYEIALQQNGWGELKPLEYTLLPVEPFKVLQLPMSLMDYVYDVADSQQAPMDFIAISALCALAAVIGNGVRIAPKQHDDNWKIVPNLWGAVVGQPSTMKSPTMQAALKPLSIFENEWYQEWEKKKKQQKTKEIFNELEIKENKRKAYKALKNQDKEQALALLSQTLEHKESEEDDSSIKRRLIVNDVTVEKLGELLKENPRGLLMVCDELTGFLANLERKEYQSDRSFYLKAFNGNQSHTYDRIGRGTIHIPNATLSIIGGIQPTRLIPLIKAMHRGINDDGLLQRFQMLIFPDTRQERLWVDRPAKKEAWESYQGVFRSLYDKPLGSPKYPITMRFSAEAQEIFREWWENFQKKINDGHFSESLQAHLIKMNETIPILALIFELVEGGRFEINRNALERALYWEKYLLSHVKRLYAAGNTLIAERAKLIVERCDHLPDVFTHRDIHQRSWTSLKDNQAVKQALELLCRCNYIREISEDKSSQGGRPTIRYEWNPLVKGHKTPQ
SIO_010081: BTR_RS00075
subclass of: SO_0000673
so part of: BTR_RS00075
location: complement(19247..20866)
location: region:19247-20866:-1
so has part: feature:19247-20866:-1:exon

WP_012230233.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19247-20866:-1:exon

BTR_RS00080
type: Gene
subclass of: SO_0000704
RO_0002162: 382640
locus tag: BTR_RS00080
old locus tag: pBT01_0016
old locus tag: PlasmidBtr_0016
so part of: sequence
location: complement(20863..21789)
location: region:20863-21789:-1
so has part: feature:20863-21789:-1:exon
subclass of: SO_0000010

position:20863:-1
position: 20863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21789:-1
position: 21789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20863-21789:-1:exon

BTR_RS00080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 382640
locus tag: BTR_RS00080
old locus tag: pBT01_0016
old locus tag: PlasmidBtr_0016
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007347738.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: toprim domain-containing protein
translation: MHFTHVIGNAYTLYTTAQKITYALRGSWHGDSGLAHCPAHDDRLPSLSIKNGHDGRLLLYCHAGCSFREIIQALIRIGLLSKQAFFDKACAHTLSLSKQFCADLKQAKRKAERAKVIWQQSQPIKNTLAETYLRMRGITCDLPADLCFYDKCLHPSGGTLPALIALVKGAGSFAIHRTFLQNNGCKTDQKPAKAMLGSVMGGAVHLSQANPKHLVICEGIETGLALLSGLLSEPVDLWASLSTHGMMRVNLPKTKARLTIAMDGDEAGRKAGFNLAARAYRQGFEVFMMQAPYGLDFNDVLIRKGINK
SIO_010081: BTR_RS00080
subclass of: SO_0000673
so part of: BTR_RS00080
location: complement(20863..21789)
location: region:20863-21789:-1
so has part: feature:20863-21789:-1:exon

WP_012230235.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20863-21789:-1:exon

BTR_RS00085
type: Gene
subclass of: SO_0000704
RO_0002162: 382640
locus tag: BTR_RS00085
old locus tag: pBT01_0017
so part of: sequence
location: complement(22431..22886)
location: region:22431-22886:-1
so has part: feature:22431-22886:-1:exon
subclass of: SO_0000010

position:22431:-1
position: 22431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22886:-1
position: 22886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22431-22886:-1:exon

BTR_RS00085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 382640
locus tag: BTR_RS00085
old locus tag: pBT01_0017
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015398784.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTKRLHGVRSDLCSYLRDIEKSGDLSLLLGAERGLVENDLLRYANSKAMINSLKTALMEIDVIKKHIILVSNPAQYKVVNEVYSLPKNRKGGLPYDEARQAIASHYTRLGNLDKARLTDIEKSILDVRRDNIKVMQKLYEKMQAKAIGIDL
SIO_010081: BTR_RS00085
subclass of: SO_0000673
so part of: BTR_RS00085
location: complement(22431..22886)
location: region:22431-22886:-1
so has part: feature:22431-22886:-1:exon

WP_171815245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22431-22886:-1:exon

BTR_RS00090
type: Gene
subclass of: SO_0000704
RO_0002162: 382640
locus tag: BTR_RS00090
old locus tag: pBT01_0018
old locus tag: PlasmidBtr_0018
so part of: sequence
location: complement(22957..23262)
location: region:22957-23262:-1
so has part: feature:22957-23262:-1:exon
subclass of: SO_0000010

position:22957:-1
position: 22957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23262:-1
position: 23262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22957-23262:-1:exon

BTR_RS00090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 382640
locus tag: BTR_RS00090
old locus tag: pBT01_0018
old locus tag: PlasmidBtr_0018
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007347971.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQKKLPKSYMTDAEREELRAGGLDQNCIYTAESEAADKANDSQAAWEWLAMTEPPAHTLLFLKKRHGAQFIRDMGFSTKDADKEYGPDWLDKDVIIGGHHF
SIO_010081: BTR_RS00090
subclass of: SO_0000673
so part of: BTR_RS00090
location: complement(22957..23262)
location: region:22957-23262:-1
so has part: feature:22957-23262:-1:exon

WP_012230239.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22957-23262:-1:exon