Cajanus cajan chromosome 9, C.cajan_V1.0, whole genome shotgun sequence.
type: Entry
definition: Cajanus cajan chromosome 9, C.cajan_V1.0, whole genome shotgun sequence.
sequence version: NC_033812.1
sequence date: 2019-05-23
sequence: sequence
division: CON
label: NC_033812.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA376605
dblink: SAMN02981370
keyword: WGS
keyword: RefSeq
source: Cajanus cajan (pigeon pea)
organism: Cajanus cajan
taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus.
reference: 1
references: 22057054
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM003611.1.\nAssembly name: C.cajan_V1.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the BGI on 2016/03/30. The\noriginal whole-genome shotgun project has the accession\nAGCT00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: BGI\nAssembly Method :: SOAPdenovo v. 1.05\nAssembly Name :: C.cajan_V1.0\nGenome Coverage :: 160x\nSequencing Technology :: Illumina Hiseq2000\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Cajanus cajan Annotation Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 10489139
topology: linear
so has quality: SO_0000987
location: 1..10489139
location: region:1-10489139:1
RO_0002162: 3821

NC_033812
type: RefSeq
SIO_000068: refseq

PRJNA376605
type: BioProject
SIO_000068: bioproject

SAMN02981370
type: BioSample
SIO_000068: biosample

1
title: Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop of resource-poor farmers
author: Varshney, R.K.
author: Chen, W.
author: Li, Y.
author: Bharti, A.K.
author: Saxena, R.K.
author: Schlueter, J.A.
author: Donoghue, M.T.
author: Azam, S.
author: Fan, G.
author: Whaley, A.M.
author: Farmer, A.D.
author: Sheridan, J.
author: Iwata, A.
author: Tuteja, R.
author: Penmetsa, R.V.
author: Wu, W.
author: Upadhyaya, H.D.
author: Yang, S.P.
author: Shah, T.
author: Saxena, K.B.
author: Michael, T.
author: McCombie, W.R.
author: Yang, B.
author: Zhang, G.
author: Yang, H.
author: Wang, J.
author: Spillane, C.
author: Cook, D.R.
author: May, G.D.
author: Xu, X.
author: Jackson, S.A.
journal: Nat. Biotechnol.
volume: 30
issue: 1
pages: 83-89
year: 2012
pubmed: 22057054
comments: Publication Status: Online-Only

22057054
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10489139:1
position: 10489139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-10489139:1:source
so part of: sequence
organism: Cajanus cajan
mol type: genomic DNA
bio material: ICRISAT:ICPL 87119
chromosome: 9

3821
type: Taxonomy
SIO_000068: taxonomy

LOC109805305
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109805305
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(22075..25056)
location: region:22075-25056:-1
so has part: feature:22075-25056:-1:exon
subclass of: SO_0000010

109805305
type: Gene
SIO_000068: ncbigene

position:22075:-1
position: 22075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25056:-1
position: 25056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22075-25056:-1:exon

LOC109805305
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805305
product: expansin-B15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_020367339.1
SIO_010081: LOC109805305
subclass of: SO_0000673
so part of: LOC109805305
location: complement(join(22075..22489,23287..23471,24549..24661,24787..25056))
location: region:22075-25056:-1
so has part: feature:24787-25056:-1:exon
so has part: feature:24549-24661:-1:exon
so has part: feature:23287-23471:-1:exon
so has part: feature:22075-22489:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24787-25056:-1:exon

position:24787:-1
position: 24787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:24549-24661:-1:exon

position:24549:-1
position: 24549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24661:-1
position: 24661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:23287-23471:-1:exon

position:23287:-1
position: 23287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23471:-1
position: 23471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:22075-22489:-1:exon

position:22489:-1
position: 22489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109805305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805305
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: expansin-B15
translation: MAPTLQRVFSHLLTLVATLSILLVVPSSCFKTKKIVNASFDSYSSVGTNWSPAVATWYGAPNGDGSEGGACGYGSVVGVPPFSSLISAGGSLLYESGKGCGSCYEVKCTGNYGCSGNPVSVVITDECPGCDGQYHFDLSGTAFGAMAVSGQAEKLRGAGKITIQFRRVECNFPGVKIAFRVDPGSNQQYFAMVVEYEDGDGEIDKVELSEASSASWYSMQRSWGAVWKLNNGSPLKAPFSIRLTTFSSGQSVVANNVIPVGWTPGQTYRSVVNFK
SIO_010081: LOC109805305
subclass of: SO_0000673
so part of: LOC109805305
location: complement(join(22162..22489,23287..23471,24549..24661,24787..24988))
location: region:22162-24988:-1
so has part: feature:24787-24988:-1:exon
so has part: feature:24549-24661:-1:exon
so has part: feature:23287-23471:-1:exon
so has part: feature:22162-22489:-1:exon

XP_020222928.1
type: Protein
SIO_000068: ncbiprotein

position:22162:-1
position: 22162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24988:-1
position: 24988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24787-24988:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:24549-24661:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:23287-23471:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:22162-22489:-1:exon

LOC109805254
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109805254
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(62623..68381)
location: region:62623-68381:-1
so has part: feature:62623-68381:-1:exon
subclass of: SO_0000010

109805254
type: Gene
SIO_000068: ncbigene

position:62623:-1
position: 62623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68381:-1
position: 68381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62623-68381:-1:exon

LOC109805254
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805254
product: guanine nucleotide-binding protein-like NSN1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_020367274.2
SIO_010081: LOC109805254
subclass of: SO_0000673
so part of: LOC109805254
location: complement(join(62623..63214,63331..63539,63644..63829,64802..65066,66319..66542,66635..66808,66909..67017,67916..68160,68237..68381))
location: region:62623-68381:-1
so has part: feature:68237-68381:-1:exon
so has part: feature:67916-68160:-1:exon
so has part: feature:66909-67017:-1:exon
so has part: feature:66635-66808:-1:exon
so has part: feature:66319-66542:-1:exon
so has part: feature:64802-65066:-1:exon
so has part: feature:63644-63829:-1:exon
so has part: feature:63331-63539:-1:exon
so has part: feature:62623-63214:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:68237-68381:-1:exon

position:68237:-1
position: 68237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:67916-68160:-1:exon

position:67916:-1
position: 67916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68160:-1
position: 68160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:66909-67017:-1:exon

position:66909:-1
position: 66909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67017:-1
position: 67017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:66635-66808:-1:exon

position:66635:-1
position: 66635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66808:-1
position: 66808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:66319-66542:-1:exon

position:66319:-1
position: 66319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66542:-1
position: 66542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:64802-65066:-1:exon

position:64802:-1
position: 64802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65066:-1
position: 65066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:63644-63829:-1:exon

position:63644:-1
position: 63644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63829:-1
position: 63829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:63331-63539:-1:exon

position:63331:-1
position: 63331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63539:-1
position: 63539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:62623-63214:-1:exon

position:63214:-1
position: 63214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109805254
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805254
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide-binding protein-like NSN1
translation: MVKKSKKSKSKRVSLKKKYKVIRKVKEHNRKKAKEAKKLRLSGKKKVEKDPGIPNDWPFKEQELKALEARRAKAIEELEQKKAERKERARKRKLGLLEDEDNSKSSEMDSLKDSVKFATVGKTRDNSDRAFYKDLVKVIEASDVLLEVLDARDPLGTRCVDIEKMVMKAGPEKRLVLLLNKIDLVPQESVEKWLKYLREELPTVAFKCSTQQQRSNLGWRSSKAAKAAKPSDILQLSDCLGADTLLKLLKNYSRSHEIKKSITVGLIGLPNVGKSSLINSLKRCHVANVGATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSTENDASVALKNCKRIEKLDDPISPVKEILKLCQPQRLEILYSIPSFKRDDVDDFLRTVATVRGKLKKGGVVDVEAAARIVLHDWNQGKIPYFTMPPVRDQGESEAKIVSDFSKEFNIDEVYNSESSYIGSLKSADDINAVEVPSSCPLNLDETMLEDDTQIKQAEQGEGPGNMAEVDESMEEDDDGAKNKGTSAASRQNEKLYAADGMLNTKKRLAEKKKRKKAKKALGSSDPMDGDYDFKVDYFQKGATMDDENSKSEEDDDQVNSEVPMSGVEVDE
SIO_010081: LOC109805254
subclass of: SO_0000673
so part of: LOC109805254
location: complement(join(62846..63214,63331..63539,63644..63829,64802..65066,66319..66542,66635..66808,66909..67017,67916..68160,68237..68255))
location: region:62846-68255:-1
so has part: feature:68237-68255:-1:exon
so has part: feature:67916-68160:-1:exon
so has part: feature:66909-67017:-1:exon
so has part: feature:66635-66808:-1:exon
so has part: feature:66319-66542:-1:exon
so has part: feature:64802-65066:-1:exon
so has part: feature:63644-63829:-1:exon
so has part: feature:63331-63539:-1:exon
so has part: feature:62846-63214:-1:exon

XP_020222863.1
type: Protein
SIO_000068: ncbiprotein

position:62846:-1
position: 62846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68255:-1
position: 68255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68237-68255:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:67916-68160:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:66909-67017:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:66635-66808:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:66319-66542:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:64802-65066:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:63644-63829:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:63331-63539:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:62846-63214:-1:exon

LOC109804838
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804838
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(78012..91229)
location: region:78012-91229:-1
so has part: feature:78012-91229:-1:exon
subclass of: SO_0000010

109804838
type: Gene
SIO_000068: ncbigene

position:78012:-1
position: 78012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91229:-1
position: 91229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78012-91229:-1:exon

LOC109804838
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804838
product: pentatricopeptide repeat-containing protein At5g04810, chloroplastic
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_020366717.2
SIO_010081: LOC109804838
subclass of: SO_0000673
so part of: LOC109804838
location: complement(join(78012..78707,79049..79178,79591..79886,81521..81949,84222..84281,85162..85315,85747..85833,88303..88443,88775..88902,90337..91229))
location: region:78012-91229:-1
so has part: feature:90337-91229:-1:exon
so has part: feature:88775-88902:-1:exon
so has part: feature:88303-88443:-1:exon
so has part: feature:85747-85833:-1:exon
so has part: feature:85162-85315:-1:exon
so has part: feature:84222-84281:-1:exon
so has part: feature:81521-81949:-1:exon
so has part: feature:79591-79886:-1:exon
so has part: feature:79049-79178:-1:exon
so has part: feature:78012-78707:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:90337-91229:-1:exon

position:90337:-1
position: 90337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:88775-88902:-1:exon

position:88775:-1
position: 88775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88902:-1
position: 88902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:88303-88443:-1:exon

position:88303:-1
position: 88303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88443:-1
position: 88443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:85747-85833:-1:exon

position:85747:-1
position: 85747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85833:-1
position: 85833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:85162-85315:-1:exon

position:85162:-1
position: 85162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85315:-1
position: 85315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:84222-84281:-1:exon

position:84222:-1
position: 84222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84281:-1
position: 84281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:81521-81949:-1:exon

position:81521:-1
position: 81521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81949:-1
position: 81949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:79591-79886:-1:exon

position:79591:-1
position: 79591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79886:-1
position: 79886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:79049-79178:-1:exon

position:79049:-1
position: 79049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79178:-1
position: 79178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:78012-78707:-1:exon

position:78707:-1
position: 78707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109804838
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804838
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pentatricopeptide repeat-containing protein At5g04810, chloroplastic
translation: MEPFSFSTSHLSIPTSSTIFSPKHHSSSSSSSSAATTTVSFSLKPPSDSNNSAAPRRPSKSLKTTPTPNPLASKLWLTSKLSPPPPPPPPPTPPPPPPPPPETEESGGEGANSDSEIDFRQPGKIFVGNLPAWVKKPQVAEFFRQFGAIRSVVLIRGHRETERNAGFAFVFYEGDEEAADKAAMRAVEFDGVEFHGRVLTVKLDDGKRTREKAQERARWLEGKGEKGEYRSTWHEERDGSRKDFQKVLETQPENWQAVVSAFERIKKPARKEYGLMVKYYARRGDMHHARQTFESMRARGIEPSSHVYSSLIHAYAVGRDMEEALHCVKKMKEEGIEMTIVTYSIIVGGFAKMGNANAADQWFKEAKERLPSLNAVIYGSIIYAHCQACNMDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEDKCLIVFDRLKECGFSPSVISYGCLINLYTKIGKVSKALEINKMMKMTGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMGNMDRAICMVKQMQKERHRPTTRTFLPIIHGFAKAGEMRRALEIFDMMRRNGCIPTVHTYNALILGLVEKRQMAKAVAILDEMNLAGVAPNEHTYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKACCKSGRMQSALAVTKEMSAKKIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGVRPDIHTYTSFINACCKAGDMQKATEIIQEMEASGIKPNIKTYTTLINGWARASMPEKALKCFEEMKEAGLKPDRAVYHCLVTSLLSRATFAQSYVYSGLLSICREMIESEMTVDMGTAVHWSRCLRKIERTGGELTEALQKTFPPDWTSHNVLDVNSETETADLEIDDVDNEDDYDVHYNANGFNNDDETDDEDSDNEDQDSLQLKF
SIO_010081: LOC109804838
subclass of: SO_0000673
so part of: LOC109804838
location: complement(join(78147..78707,79049..79178,79591..79886,81521..81949,84222..84281,85162..85315,85747..85833,88303..88443,88775..88902,90337..91137))
location: region:78147-91137:-1
so has part: feature:90337-91137:-1:exon
so has part: feature:88775-88902:-1:exon
so has part: feature:88303-88443:-1:exon
so has part: feature:85747-85833:-1:exon
so has part: feature:85162-85315:-1:exon
so has part: feature:84222-84281:-1:exon
so has part: feature:81521-81949:-1:exon
so has part: feature:79591-79886:-1:exon
so has part: feature:79049-79178:-1:exon
so has part: feature:78147-78707:-1:exon

XP_020222306.1
type: Protein
SIO_000068: ncbiprotein

position:78147:-1
position: 78147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91137:-1
position: 91137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90337-91137:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:88775-88902:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:88303-88443:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:85747-85833:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:85162-85315:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:84222-84281:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:81521-81949:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:79591-79886:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:79049-79178:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:78147-78707:-1:exon

LOC109804901
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804901
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 97283..125179
location: region:97283-125179:1
so has part: feature:97283-125179:1:exon
subclass of: SO_0000010

109804901
type: Gene
SIO_000068: ncbigene

position:97283:1
position: 97283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125179:1
position: 125179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97283-125179:1:exon

LOC109804901
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804901
product: DNA mismatch repair protein MSH1, mitochondrial
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020366819.2
SIO_010081: LOC109804901
subclass of: SO_0000673
so part of: LOC109804901
location: join(97283..97574,99302..99443,99583..99680,100087..100162,100367..100486,100679..100726,100972..101036,104403..104488,105285..105449,105842..105951,106063..106168,106250..106325,111876..111934,112094..112161,113660..113833,114836..115042,115145..115401,115517..115660,124749..124860,124972..125017,125106..125179)
location: region:97283-125179:1
so has part: feature:97283-97574:1:exon
so has part: feature:99302-99443:1:exon
so has part: feature:99583-99680:1:exon
so has part: feature:100087-100162:1:exon
so has part: feature:100367-100486:1:exon
so has part: feature:100679-100726:1:exon
so has part: feature:100972-101036:1:exon
so has part: feature:104403-104488:1:exon
so has part: feature:105285-105449:1:exon
so has part: feature:105842-105951:1:exon
so has part: feature:106063-106168:1:exon
so has part: feature:106250-106325:1:exon
so has part: feature:111876-111934:1:exon
so has part: feature:112094-112161:1:exon
so has part: feature:113660-113833:1:exon
so has part: feature:114836-115042:1:exon
so has part: feature:115145-115401:1:exon
so has part: feature:115517-115660:1:exon
so has part: feature:124749-124860:1:exon
so has part: feature:124972-125017:1:exon
so has part: feature:125106-125179:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:97283-97574:1:exon

position:97574:1
position: 97574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:99302-99443:1:exon

position:99302:1
position: 99302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99443:1
position: 99443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:99583-99680:1:exon

position:99583:1
position: 99583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99680:1
position: 99680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:100087-100162:1:exon

position:100087:1
position: 100087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100162:1
position: 100162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:100367-100486:1:exon

position:100367:1
position: 100367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100486:1
position: 100486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:100679-100726:1:exon

position:100679:1
position: 100679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100726:1
position: 100726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:100972-101036:1:exon

position:100972:1
position: 100972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101036:1
position: 101036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:104403-104488:1:exon

position:104403:1
position: 104403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104488:1
position: 104488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:105285-105449:1:exon

position:105285:1
position: 105285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105449:1
position: 105449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:105842-105951:1:exon

position:105842:1
position: 105842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105951:1
position: 105951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:106063-106168:1:exon

position:106063:1
position: 106063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106168:1
position: 106168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:106250-106325:1:exon

position:106250:1
position: 106250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106325:1
position: 106325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:111876-111934:1:exon

position:111876:1
position: 111876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111934:1
position: 111934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:112094-112161:1:exon

position:112094:1
position: 112094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112161:1
position: 112161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:113660-113833:1:exon

position:113660:1
position: 113660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113833:1
position: 113833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:114836-115042:1:exon

position:114836:1
position: 114836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115042:1
position: 115042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:115145-115401:1:exon

position:115145:1
position: 115145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115401:1
position: 115401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:115517-115660:1:exon

position:115517:1
position: 115517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115660:1
position: 115660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:124749-124860:1:exon

position:124749:1
position: 124749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124860:1
position: 124860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:124972-125017:1:exon

position:124972:1
position: 124972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125017:1
position: 125017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:125106-125179:1:exon

position:125106:1
position: 125106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109804901
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804901
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA mismatch repair protein MSH1, mitochondrial
translation: MYKLATRNVAAFLSRWRSLAHYSPSPFPTCISFVPSRALRINRHIENVSSYTDKKVSRGSSRATKKPKVPNNILDDKDLPHILWWKERLQMCRKFSTVQLIERLEYSNLLGLDSNLKNGSLKEGTLNWEMLQFKSKFPRQVLLCRVGDFYEAWGIDACILVEYAGLNPFGGLRSDSIPRAGCPVMNLRQTLDDLTQNGYSVCIVEEVQGPTQARSRKRRFISGHAHPGNPYVYGLAAVDHDLNFPEPMPVVGISHSARGYCINMVLETMKTYSSEDCLTEEAVVTKLRTCQYHHLLMHTSLKQNSSGTCNWGEFGAGGLLWGECSSRHFEWFDGNPVSDLLVKVKELYGLDHEVTFRNTTVSSGNRARSLTLGTSTQIGAIPTEGIPSLLKVLLPPTCNGLPVQYIKDLLLNPPSYEIASKIQATCKLMSSVTCSIPEFTCVSSAKLVKLLEWREVNHMEFCRIKNVLDEVLQMYRTCELNEILEYLIDPTWVATGLEIDFETLVTGCEVASSKIGEIISLDDGNDQKINSFSLIPREFFEDMESKWKGRIKRIHIDDVFTAVEKAAEALHIAVTEDFVPVVSRIKATVAPLGGPKGEISYAREHEAVWFKGKRFTPNLWAGTPGEEQIKQLRHALDSKGRKAGEEWFTTPKVEAALTRYHEANAKAKERVLEILRGLAAELQYHINILVFSSTLLVIAKALFAHARISLRNGTLDFRIVQCQLDKDDVSNRYLCLTESLLTKDCVLLCLFWTELPLVRDTLFPAPSPKQTIDWFMAKAGSFS
SIO_010081: LOC109804901
subclass of: SO_0000673
so part of: LOC109804901
location: join(97456..97574,99302..99443,99583..99680,100087..100162,100367..100486,100679..100726,100972..101036,104403..104488,105285..105449,105842..105951,106063..106168,106250..106325,111876..111934,112094..112161,113660..113833,114836..115042,115145..115401,115517..115660,124749..124860,124972..125017,125106..125179)
location: region:97456-125179:1
so has part: feature:97456-97574:1:exon
so has part: feature:99302-99443:1:exon
so has part: feature:99583-99680:1:exon
so has part: feature:100087-100162:1:exon
so has part: feature:100367-100486:1:exon
so has part: feature:100679-100726:1:exon
so has part: feature:100972-101036:1:exon
so has part: feature:104403-104488:1:exon
so has part: feature:105285-105449:1:exon
so has part: feature:105842-105951:1:exon
so has part: feature:106063-106168:1:exon
so has part: feature:106250-106325:1:exon
so has part: feature:111876-111934:1:exon
so has part: feature:112094-112161:1:exon
so has part: feature:113660-113833:1:exon
so has part: feature:114836-115042:1:exon
so has part: feature:115145-115401:1:exon
so has part: feature:115517-115660:1:exon
so has part: feature:124749-124860:1:exon
so has part: feature:124972-125017:1:exon
so has part: feature:125106-125179:1:exon

XP_020222408.1
type: Protein
SIO_000068: ncbiprotein

position:97456:1
position: 97456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97456-97574:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:99302-99443:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:99583-99680:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:100087-100162:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:100367-100486:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:100679-100726:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:100972-101036:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:104403-104488:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:105285-105449:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:105842-105951:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:106063-106168:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:106250-106325:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:111876-111934:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:112094-112161:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:113660-113833:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:114836-115042:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:115145-115401:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:115517-115660:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:124749-124860:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:124972-125017:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:125106-125179:1:exon

LOC109805122
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109805122
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 124888..128026
location: region:124888-128026:1
so has part: feature:124888-128026:1:exon
subclass of: SO_0000010

109805122
type: Gene
SIO_000068: ncbigene

position:124888:1
position: 124888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128026:1
position: 128026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124888-128026:1:exon

LOC109805122
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805122
product: EID1-like F-box protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_020367102.2
SIO_010081: LOC109805122
subclass of: SO_0000673
so part of: LOC109805122
location: join(124888..125017,125479..126124,126328..127099,127661..128026)
location: region:124888-128026:1
so has part: feature:124888-125017:1:exon
so has part: feature:125479-126124:1:exon
so has part: feature:126328-127099:1:exon
so has part: feature:127661-128026:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:124888-125017:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:125479-126124:1:exon

position:125479:1
position: 125479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126124:1
position: 126124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:126328-127099:1:exon

position:126328:1
position: 126328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127099:1
position: 127099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:127661-128026:1:exon

position:127661:1
position: 127661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109805122
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805122
product: EID1-like F-box protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XM_020367103.2
SIO_010081: LOC109805122
subclass of: SO_0000673
so part of: LOC109805122
location: join(124897..125017,126328..127099,127661..128026)
location: region:124897-128026:1
so has part: feature:124897-125017:1:exon
so has part: feature:126328-127099:1:exon
so has part: feature:127661-128026:1:exon

position:124897:1
position: 124897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124897-125017:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126328-127099:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:127661-128026:1:exon

LOC109805122
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805122
product: EID1-like F-box protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_020367105.2
SIO_010081: LOC109805122
subclass of: SO_0000673
so part of: LOC109805122
location: join(124900..125058,126328..127099,127661..128026)
location: region:124900-128026:1
so has part: feature:124900-125058:1:exon
so has part: feature:126328-127099:1:exon
so has part: feature:127661-128026:1:exon

position:124900:1
position: 124900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124900-125058:1:exon

position:125058:1
position: 125058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:126328-127099:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:127661-128026:1:exon

LOC109805122
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805122
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EID1-like F-box protein 2 isoform X2
translation: MRMILAKQYRCIHSSSCQCTKGHLSEDVIFLVFQHLNWNPKLIASLSCACKWFDDLAKRVLWKEFCRTRAPKMMLDLQSSGSHSVDGNWRALGKLLIFCSGCKKGGLFNNVQVPGHFVHRTRFSRTSGKSFLMPQCINDVLYVSDPCEHLDQGEDGDLGFFRGIFKSFASSNVRRMLINRGAQLHKTEICPYCKAKLWSMLQANMIPQSASCRLGSYEDSVEYYVCLNGHLLGVCTLFPLSDSESV
SIO_010081: LOC109805122
subclass of: SO_0000673
so part of: LOC109805122
location: join(126120..126124,126328..127063)
location: region:126120-127063:1
so has part: feature:126120-126124:1:exon
so has part: feature:126328-127063:1:exon

XP_020222691.1
type: Protein
SIO_000068: ncbiprotein

position:126120:1
position: 126120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127063:1
position: 127063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126120-126124:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126328-127063:1:exon

LOC109805122
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805122
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EID1-like F-box protein 2 isoform X1
translation: MILAKQYRCIHSSSCQCTKGHLSEDVIFLVFQHLNWNPKLIASLSCACKWFDDLAKRVLWKEFCRTRAPKMMLDLQSSGSHSVDGNWRALGKLLIFCSGCKKGGLFNNVQVPGHFVHRTRFSRTSGKSFLMPQCINDVLYVSDPCEHLDQGEDGDLGFFRGIFKSFASSNVRRMLINRGAQLHKTEICPYCKAKLWSMLQANMIPQSASCRLGSYEDSVEYYVCLNGHLLGVCTLFPLSDSESV
SIO_010081: LOC109805122
subclass of: SO_0000673
so part of: LOC109805122
location: 126329..127063
location: region:126329-127063:1
so has part: feature:126329-127063:1:exon

XP_020222692.1
type: Protein
SIO_000068: ncbiprotein

position:126329:1
position: 126329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126329-127063:1:exon

LOC109805122
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805122
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EID1-like F-box protein 2 isoform X1
translation: MILAKQYRCIHSSSCQCTKGHLSEDVIFLVFQHLNWNPKLIASLSCACKWFDDLAKRVLWKEFCRTRAPKMMLDLQSSGSHSVDGNWRALGKLLIFCSGCKKGGLFNNVQVPGHFVHRTRFSRTSGKSFLMPQCINDVLYVSDPCEHLDQGEDGDLGFFRGIFKSFASSNVRRMLINRGAQLHKTEICPYCKAKLWSMLQANMIPQSASCRLGSYEDSVEYYVCLNGHLLGVCTLFPLSDSESV
SIO_010081: LOC109805122
subclass of: SO_0000673
so part of: LOC109805122
location: 126329..127063
location: region:126329-127063:1
so has part: feature:126329-127063:1:exon

XP_020222694.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:126329-127063:1:exon

LOC109805175
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109805175
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(128877..133494)
location: region:128877-133494:-1
so has part: feature:128877-133494:-1:exon
subclass of: SO_0000010

109805175
type: Gene
SIO_000068: ncbigene

position:128877:-1
position: 128877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133494:-1
position: 133494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128877-133494:-1:exon

LOC109805175
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805175
product: uncharacterized LOC109805175
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_020367175.2
SIO_010081: LOC109805175
subclass of: SO_0000673
so part of: LOC109805175
location: complement(join(128877..129101,130287..130438,131295..131374,131453..131526,133085..133213,133353..133494))
location: region:128877-133494:-1
so has part: feature:133353-133494:-1:exon
so has part: feature:133085-133213:-1:exon
so has part: feature:131453-131526:-1:exon
so has part: feature:131295-131374:-1:exon
so has part: feature:130287-130438:-1:exon
so has part: feature:128877-129101:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:133353-133494:-1:exon

position:133353:-1
position: 133353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:133085-133213:-1:exon

position:133085:-1
position: 133085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133213:-1
position: 133213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:131453-131526:-1:exon

position:131453:-1
position: 131453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131526:-1
position: 131526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:131295-131374:-1:exon

position:131295:-1
position: 131295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131374:-1
position: 131374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:130287-130438:-1:exon

position:130287:-1
position: 130287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:130438:-1
position: 130438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:128877-129101:-1:exon

position:129101:-1
position: 129101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109805175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805175
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109805175
translation: MEEIEEGNVGKMEGVASIALLPCGSLSGHFIQLPHSICYGLCGTELECERECSRGEDYRLIKLSITDFNMKKEQTTVVECKGHDAARFHSIDHAHGWDKDVTGMIEQKDGKKRISVSFECETLKADKAAEDHIRKFLPKLAGLDAVVNIGKMKISGLDFGAEEEDEETE
SIO_010081: LOC109805175
subclass of: SO_0000673
so part of: LOC109805175
location: complement(join(129031..129101,130287..130438,131295..131374,131453..131526,133085..133213,133353..133356))
location: region:129031-133356:-1
so has part: feature:133353-133356:-1:exon
so has part: feature:133085-133213:-1:exon
so has part: feature:131453-131526:-1:exon
so has part: feature:131295-131374:-1:exon
so has part: feature:130287-130438:-1:exon
so has part: feature:129031-129101:-1:exon

XP_020222764.1
type: Protein
SIO_000068: ncbiprotein

position:129031:-1
position: 129031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133356:-1
position: 133356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133353-133356:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133085-133213:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:131453-131526:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:131295-131374:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:130287-130438:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:129031-129101:-1:exon

LOC109804840
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804840
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(137339..146255)
location: region:137339-146255:-1
so has part: feature:137339-146255:-1:exon
subclass of: SO_0000010

109804840
type: Gene
SIO_000068: ncbigene

position:137339:-1
position: 137339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146255:-1
position: 146255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137339-146255:-1:exon

LOC109804840
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804840
product: chaperone protein ClpB3, chloroplastic
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_020366719.2
SIO_010081: LOC109804840
subclass of: SO_0000673
so part of: LOC109804840
location: complement(join(137339..137949,138354..139280,139496..139761,140621..140929,141199..141349,141608..141662,142650..142845,143124..143361,144230..144436,144934..144945,145856..146255))
location: region:137339-146255:-1
so has part: feature:145856-146255:-1:exon
so has part: feature:144934-144945:-1:exon
so has part: feature:144230-144436:-1:exon
so has part: feature:143124-143361:-1:exon
so has part: feature:142650-142845:-1:exon
so has part: feature:141608-141662:-1:exon
so has part: feature:141199-141349:-1:exon
so has part: feature:140621-140929:-1:exon
so has part: feature:139496-139761:-1:exon
so has part: feature:138354-139280:-1:exon
so has part: feature:137339-137949:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:145856-146255:-1:exon

position:145856:-1
position: 145856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:144934-144945:-1:exon

position:144934:-1
position: 144934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144945:-1
position: 144945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:144230-144436:-1:exon

position:144230:-1
position: 144230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144436:-1
position: 144436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:143124-143361:-1:exon

position:143124:-1
position: 143124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143361:-1
position: 143361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:142650-142845:-1:exon

position:142650:-1
position: 142650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142845:-1
position: 142845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:141608-141662:-1:exon

position:141608:-1
position: 141608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141662:-1
position: 141662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:141199-141349:-1:exon

position:141199:-1
position: 141199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141349:-1
position: 141349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:140621-140929:-1:exon

position:140621:-1
position: 140621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140929:-1
position: 140929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:139496-139761:-1:exon

position:139496:-1
position: 139496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139761:-1
position: 139761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:138354-139280:-1:exon

position:138354:-1
position: 138354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139280:-1
position: 139280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:137339-137949:-1:exon

position:137949:-1
position: 137949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109804840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804840
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chaperone protein ClpB3, chloroplastic
translation: MLCFRTHTTFSLTPPTTTSPFRSPAMASATSFSGLALRHTAPTRARRNHARFAPFQVSFSFPANPTCVKTLNSVALKKREAFSNGSSRARRNPTRFSVRCTASSSGKISQQEFTEMAWQAIISSPEVAKENKHQIVETEHLMKALLEQKNGLARRIFSKVGVDNTRLLEATDKHIRRQPKVLGESAGSMLGRDLEALIQRARDFKKEYGDSFVSVEHLVLGFAQDQRFGKILFRDFQISQQALKSAIESIRGRQSVIDQDPEGKYEALEKYGKDLTAMAKAGKLDPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAISEGLAQRIVQGDVPQALMNRRLISLDMGALIAGAKYRGEFEDRLKAVLKEVTESDGQTILFIDEIHTVVGAGATNGALDAGNLLKPMLGRGELRCIGATTLDEYRKYIEKDPALERRFQQVYVDQPSVEDTISILRGLRERYELHHGVRISDSALVDAAILSDRYISGRFLPDKAIDLVDEAAAKLKMEITSKPTALDEINRSVLKLEMERLSLVNDTGKASKDRLNRLDAELSLLKEKQDELTEQWEHEKSVMTRLQSIKEEIDRVNLEIQQAEREYDLNRAAELKYGSLNSLQRQLESAEKELHEYMNSGKSMLREEVSGNDIAEIVSKWTGIPISKLQQSEREKLLYLEEELHKRVVGQDPAVKAVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYLFNTEEALVRIDMSEYMEKLSVSRLIGAPPGYVGYEEGGQLTETVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNTDDDTVPKESAYETIKQRVMDAARSIFRPEFMNRVDEYIVFRPLDRDQISSIVRLQLDRVQKRIADRKMKIQVTEAAIQLLGSLGYDPNYGARPVKRVIQQNVENELAKGILRGEFKEEDIILVDTEVTAFSNGQLPQQKLVFRRVEADSESSSIKDSWEGFSQIL
SIO_010081: LOC109804840
subclass of: SO_0000673
so part of: LOC109804840
location: complement(join(137617..137949,138354..139280,139496..139761,140621..140929,141199..141349,141608..141662,142650..142845,143124..143361,144230..144436,144934..144945,145856..146176))
location: region:137617-146176:-1
so has part: feature:145856-146176:-1:exon
so has part: feature:144934-144945:-1:exon
so has part: feature:144230-144436:-1:exon
so has part: feature:143124-143361:-1:exon
so has part: feature:142650-142845:-1:exon
so has part: feature:141608-141662:-1:exon
so has part: feature:141199-141349:-1:exon
so has part: feature:140621-140929:-1:exon
so has part: feature:139496-139761:-1:exon
so has part: feature:138354-139280:-1:exon
so has part: feature:137617-137949:-1:exon

XP_020222308.1
type: Protein
SIO_000068: ncbiprotein

position:137617:-1
position: 137617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146176:-1
position: 146176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145856-146176:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:144934-144945:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:144230-144436:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:143124-143361:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:142650-142845:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141608-141662:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:141199-141349:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:140621-140929:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:139496-139761:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:138354-139280:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:137617-137949:-1:exon

LOC109804789
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804789
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(167967..172530)
location: region:167967-172530:-1
so has part: feature:167967-172530:-1:exon
subclass of: SO_0000010

109804789
type: Gene
SIO_000068: ncbigene

position:167967:-1
position: 167967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172530:-1
position: 172530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167967-172530:-1:exon

LOC109804789
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804789
product: membrane-anchored ubiquitin-fold protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_020366647.2
SIO_010081: LOC109804789
subclass of: SO_0000673
so part of: LOC109804789
location: complement(join(167967..169130,170084..170248,171488..171775,172478..172530))
location: region:167967-172530:-1
so has part: feature:172478-172530:-1:exon
so has part: feature:171488-171775:-1:exon
so has part: feature:170084-170248:-1:exon
so has part: feature:167967-169130:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:172478-172530:-1:exon

position:172478:-1
position: 172478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:171488-171775:-1:exon

position:171488:-1
position: 171488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171775:-1
position: 171775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:170084-170248:-1:exon

position:170084:-1
position: 170084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170248:-1
position: 170248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:167967-169130:-1:exon

position:169130:-1
position: 169130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109804789
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804789
product: membrane-anchored ubiquitin-fold protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XM_020366643.2
SIO_010081: LOC109804789
subclass of: SO_0000673
so part of: LOC109804789
location: complement(join(167967..169130,170084..170248,171488..171775,172103..172471))
location: region:167967-172471:-1
so has part: feature:172103-172471:-1:exon
so has part: feature:171488-171775:-1:exon
so has part: feature:170084-170248:-1:exon
so has part: feature:167967-169130:-1:exon

position:172471:-1
position: 172471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172103-172471:-1:exon

position:172103:-1
position: 172103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:171488-171775:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:170084-170248:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:167967-169130:-1:exon

LOC109804789
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804789
product: membrane-anchored ubiquitin-fold protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_020366648.2
SIO_010081: LOC109804789
subclass of: SO_0000673
so part of: LOC109804789
location: complement(join(167967..169130,170052..170248,171488..171775,172103..172471))
location: region:167967-172471:-1
so has part: feature:172103-172471:-1:exon
so has part: feature:171488-171775:-1:exon
so has part: feature:170052-170248:-1:exon
so has part: feature:167967-169130:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:172103-172471:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:171488-171775:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:170052-170248:-1:exon

position:170052:-1
position: 170052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:167967-169130:-1:exon

LOC109804789
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804789
product: membrane-anchored ubiquitin-fold protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_020366644.2
SIO_010081: LOC109804789
subclass of: SO_0000673
so part of: LOC109804789
location: complement(join(167967..169130,170084..170248,171488..171775,172050..172471))
location: region:167967-172471:-1
so has part: feature:172050-172471:-1:exon
so has part: feature:171488-171775:-1:exon
so has part: feature:170084-170248:-1:exon
so has part: feature:167967-169130:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:172050-172471:-1:exon

position:172050:-1
position: 172050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:171488-171775:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:170084-170248:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:167967-169130:-1:exon

LOC109804789
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804789
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane-anchored ubiquitin-fold protein 2 isoform X1
translation: MAGSQDQLEIKFRLSDGTDIGPKSYAAATSIATLKESILAQWPKDNEYGPRTVKDMKLISAGQILENNRTVGECQSPLCDLPGGVTTMHVVVQPPSVEKDKKVASEAKMSKCVCVIL
SIO_010081: LOC109804789
subclass of: SO_0000673
so part of: LOC109804789
location: complement(join(169075..169130,170084..170248,171488..171620))
location: region:169075-171620:-1
so has part: feature:171488-171620:-1:exon
so has part: feature:170084-170248:-1:exon
so has part: feature:169075-169130:-1:exon

XP_020222232.1
type: Protein
SIO_000068: ncbiprotein

position:169075:-1
position: 169075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171620:-1
position: 171620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171488-171620:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:170084-170248:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:169075-169130:-1:exon

LOC109804789
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804789
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane-anchored ubiquitin-fold protein 2 isoform X1
translation: MAGSQDQLEIKFRLSDGTDIGPKSYAAATSIATLKESILAQWPKDNEYGPRTVKDMKLISAGQILENNRTVGECQSPLCDLPGGVTTMHVVVQPPSVEKDKKVASEAKMSKCVCVIL
SIO_010081: LOC109804789
subclass of: SO_0000673
so part of: LOC109804789
location: complement(join(169075..169130,170084..170248,171488..171620))
location: region:169075-171620:-1
so has part: feature:171488-171620:-1:exon
so has part: feature:170084-170248:-1:exon
so has part: feature:169075-169130:-1:exon

XP_020222233.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:171488-171620:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:170084-170248:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:169075-169130:-1:exon

LOC109804789
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804789
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane-anchored ubiquitin-fold protein 2 isoform X1
translation: MAGSQDQLEIKFRLSDGTDIGPKSYAAATSIATLKESILAQWPKDNEYGPRTVKDMKLISAGQILENNRTVGECQSPLCDLPGGVTTMHVVVQPPSVEKDKKVASEAKMSKCVCVIL
SIO_010081: LOC109804789
subclass of: SO_0000673
so part of: LOC109804789
location: complement(join(169075..169130,170084..170248,171488..171620))
location: region:169075-171620:-1
so has part: feature:171488-171620:-1:exon
so has part: feature:170084-170248:-1:exon
so has part: feature:169075-169130:-1:exon

XP_020222236.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:171488-171620:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:170084-170248:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:169075-169130:-1:exon

LOC109804789
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804789
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane-anchored ubiquitin-fold protein 1 isoform X2
translation: MAGSQDQLEIKFRLSDGTDIGPKSYAAATSIATLKESILAQWPKDNEYGPRTVKDMKLISAGQILENNRTVGECQSPLCDLPGGVTTMHVVVQPPSVEKGYYS
SIO_010081: LOC109804789
subclass of: SO_0000673
so part of: LOC109804789
location: complement(join(170070..170248,171488..171620))
location: region:170070-171620:-1
so has part: feature:171488-171620:-1:exon
so has part: feature:170070-170248:-1:exon

XP_020222237.1
type: Protein
SIO_000068: ncbiprotein

position:170070:-1
position: 170070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171488-171620:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:170070-170248:-1:exon

LOC109804787
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804787
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(174741..181396)
location: region:174741-181396:-1
so has part: feature:174741-181396:-1:exon
subclass of: SO_0000010

109804787
type: Gene
SIO_000068: ncbigene

position:174741:-1
position: 174741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181396:-1
position: 181396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174741-181396:-1:exon

LOC109804787
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804787
product: probable galacturonosyltransferase 13, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XM_020366642.2
SIO_010081: LOC109804787
subclass of: SO_0000673
so part of: LOC109804787
location: complement(join(174741..175733,176276..176578,177134..177724,179249..179404,179514..179569,180674..181396))
location: region:174741-181396:-1
so has part: feature:180674-181396:-1:exon
so has part: feature:179514-179569:-1:exon
so has part: feature:179249-179404:-1:exon
so has part: feature:177134-177724:-1:exon
so has part: feature:176276-176578:-1:exon
so has part: feature:174741-175733:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:180674-181396:-1:exon

position:180674:-1
position: 180674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:179514-179569:-1:exon

position:179514:-1
position: 179514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179569:-1
position: 179569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:179249-179404:-1:exon

position:179249:-1
position: 179249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179404:-1
position: 179404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:177134-177724:-1:exon

position:177134:-1
position: 177134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177724:-1
position: 177724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:176276-176578:-1:exon

position:176276:-1
position: 176276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176578:-1
position: 176578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:174741-175733:-1:exon

position:175733:-1
position: 175733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109804787
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804787
product: probable galacturonosyltransferase 13, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_020366641.2
SIO_010081: LOC109804787
subclass of: SO_0000673
so part of: LOC109804787
location: complement(join(174741..175733,176276..176578,177134..177724,179249..179407,179514..179569,180674..181395))
location: region:174741-181395:-1
so has part: feature:180674-181395:-1:exon
so has part: feature:179514-179569:-1:exon
so has part: feature:179249-179407:-1:exon
so has part: feature:177134-177724:-1:exon
so has part: feature:176276-176578:-1:exon
so has part: feature:174741-175733:-1:exon

position:181395:-1
position: 181395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180674-181395:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:179514-179569:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:179249-179407:-1:exon

position:179407:-1
position: 179407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:177134-177724:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:176276-176578:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:174741-175733:-1:exon

LOC109804787
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804787
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable galacturonosyltransferase 14 isoform X2
translation: MQLHFSPSMRSITISSNNGFIDLMKIKVAACHISYRTLFHTILILAFLLPFVFILTALVTLEGVNKCSSFDCLGRRLGPRLLGRVDDSTRLVRDFYKILNEVKTGDIPSALKLPDSFDQLVSDMRNNQYDAKTFALMLRGMMEKFEREIRQSKFSELMNKHFAASSIPKGIHCLSLRLTDEYSSNAHARKQLPPPELLPTLSDNSYHHFIVSTDNILAASVVVTSTVQSSQKPENIVFHVITDKKTYAGMHSWFALNPASPAIVEVRGIHQFDWLTRENVPVLEAVENQNGIRNYYHGNHFSETNLSDTNPRKFASTLQARSPKYISLLNHLRIYIPELFPNLDKVVFLDDDVVVQRDLSPLWEIDLNGKVNGAVETCRGEDEWVMSKHFRNYFNFSHPLIAQHLDPDECAWAYGMNVFDLRMWRATNIRETYHTWLKENLKSNLTMWKLGTLPPALIAFKGHIHPIDPSWHMLGLGYQNKTDVESVKQAAVIHYNGQSKPWLQIGFEHLRPFWTKYINYSNDFVRNCHILDS
SIO_010081: LOC109804787
subclass of: SO_0000673
so part of: LOC109804787
location: complement(join(175449..175733,176276..176578,177134..177724,179249..179404,179514..179569,180674..180884))
location: region:175449-180884:-1
so has part: feature:180674-180884:-1:exon
so has part: feature:179514-179569:-1:exon
so has part: feature:179249-179404:-1:exon
so has part: feature:177134-177724:-1:exon
so has part: feature:176276-176578:-1:exon
so has part: feature:175449-175733:-1:exon

XP_020222231.1
type: Protein
SIO_000068: ncbiprotein

position:175449:-1
position: 175449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180884:-1
position: 180884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180674-180884:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:179514-179569:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:179249-179404:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:177134-177724:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:176276-176578:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:175449-175733:-1:exon

LOC109804787
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804787
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable galacturonosyltransferase 13 isoform X1
translation: MQLHFSPSMRSITISSNNGFIDLMKIKVAACHISYRTLFHTILILAFLLPFVFILTALVTLEGVNKCSSFDCLGRRLGPRLLGRVDDSTQRLVRDFYKILNEVKTGDIPSALKLPDSFDQLVSDMRNNQYDAKTFALMLRGMMEKFEREIRQSKFSELMNKHFAASSIPKGIHCLSLRLTDEYSSNAHARKQLPPPELLPTLSDNSYHHFIVSTDNILAASVVVTSTVQSSQKPENIVFHVITDKKTYAGMHSWFALNPASPAIVEVRGIHQFDWLTRENVPVLEAVENQNGIRNYYHGNHFSETNLSDTNPRKFASTLQARSPKYISLLNHLRIYIPELFPNLDKVVFLDDDVVVQRDLSPLWEIDLNGKVNGAVETCRGEDEWVMSKHFRNYFNFSHPLIAQHLDPDECAWAYGMNVFDLRMWRATNIRETYHTWLKENLKSNLTMWKLGTLPPALIAFKGHIHPIDPSWHMLGLGYQNKTDVESVKQAAVIHYNGQSKPWLQIGFEHLRPFWTKYINYSNDFVRNCHILDS
SIO_010081: LOC109804787
subclass of: SO_0000673
so part of: LOC109804787
location: complement(join(175449..175733,176276..176578,177134..177724,179249..179407,179514..179569,180674..180884))
location: region:175449-180884:-1
so has part: feature:180674-180884:-1:exon
so has part: feature:179514-179569:-1:exon
so has part: feature:179249-179407:-1:exon
so has part: feature:177134-177724:-1:exon
so has part: feature:176276-176578:-1:exon
so has part: feature:175449-175733:-1:exon

XP_020222230.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:180674-180884:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:179514-179569:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:179249-179407:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:177134-177724:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:176276-176578:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:175449-175733:-1:exon

LOC109805252
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109805252
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(215720..217819)
location: region:215720-217819:-1
so has part: feature:215720-217819:-1:exon
subclass of: SO_0000010

109805252
type: Gene
SIO_000068: ncbigene

position:215720:-1
position: 215720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217819:-1
position: 217819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215720-217819:-1:exon

LOC109805252
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805252
product: 7-deoxyloganetin glucosyltransferase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_029272663.1
SIO_010081: LOC109805252
subclass of: SO_0000673
so part of: LOC109805252
location: complement(join(215720..216862,217201..217819))
location: region:215720-217819:-1
so has part: feature:217201-217819:-1:exon
so has part: feature:215720-216862:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:217201-217819:-1:exon

position:217201:-1
position: 217201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:215720-216862:-1:exon

position:216862:-1
position: 216862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109805252
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805252
product: 7-deoxyloganetin glucosyltransferase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_020367272.2
SIO_010081: LOC109805252
subclass of: SO_0000673
so part of: LOC109805252
location: complement(join(215720..216862,217183..217816))
location: region:215720-217816:-1
so has part: feature:217183-217816:-1:exon
so has part: feature:215720-216862:-1:exon

position:217816:-1
position: 217816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217183-217816:-1:exon

position:217183:-1
position: 217183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:215720-216862:-1:exon

LOC109805252
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805252
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 7-deoxyloganetin glucosyltransferase isoform X2
translation: MSYSETRKPHAVLVPLPFQGHINPMFQLAKLLHLRGFHITFVNTENNHKLLLQSMPPNALDGLQDFCFETISDGRGDSQDIFSICESIRKHLLLPFCELLARLNDSATKGLVPPVTCLVSDWSMSFTLQAAEQLALPIVLLPAASACLFLSGLHFQTLFDKDESCLTNGYLDTKVDCIPGIKDFRLKDLPDFIRITDPNDFMVNFLIENANNVPRASAIVLNSFDELESDVLNALSSKFPSLYPIGPFSSFLSQSPQKNHLTTLGSSLLKEDIECLGWLESKEPNSVVYVNFGSTTVMSQEKFLEFAWGLANSKRPFLWIIRPDLVIAGSVMLPSEFVSETSDRGLITGWCPQEQVLNHPAVGGFLTHCGWNSTVESICAGVPMLCWPFFADQPTNCRYICNEWDIGIEIDANVKREEVEKLVNELMEGEKGKKMREKVMELKKKAEEDTRPGGRSYMNLDKVISDVLLKKMSK
SIO_010081: LOC109805252
subclass of: SO_0000673
so part of: LOC109805252
location: complement(join(215922..216862,217201..217684))
location: region:215922-217684:-1
so has part: feature:217201-217684:-1:exon
so has part: feature:215922-216862:-1:exon

XP_029128496.1
type: Protein
SIO_000068: ncbiprotein

position:215922:-1
position: 215922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217684:-1
position: 217684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217201-217684:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:215922-216862:-1:exon

LOC109805252
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805252
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 7-deoxyloganetin glucosyltransferase isoform X1
translation: MSYSETRKPHAVLVPLPFQGHINPMFQLAKLLHLRGFHITFVNTENNHKLLLQSMPPNALDGLQDFCFETISDGRGDSQDIFSICESIRKHLLLPFCELLARLNDSATKGLVPPVTCLVSDWSMSFTLQAAEQLALPIVLLPAASACLFLSGLHFQTLFDKGLIPLKDESCLTNGYLDTKVDCIPGIKDFRLKDLPDFIRITDPNDFMVNFLIENANNVPRASAIVLNSFDELESDVLNALSSKFPSLYPIGPFSSFLSQSPQKNHLTTLGSSLLKEDIECLGWLESKEPNSVVYVNFGSTTVMSQEKFLEFAWGLANSKRPFLWIIRPDLVIAGSVMLPSEFVSETSDRGLITGWCPQEQVLNHPAVGGFLTHCGWNSTVESICAGVPMLCWPFFADQPTNCRYICNEWDIGIEIDANVKREEVEKLVNELMEGEKGKKMREKVMELKKKAEEDTRPGGRSYMNLDKVISDVLLKKMSK
SIO_010081: LOC109805252
subclass of: SO_0000673
so part of: LOC109805252
location: complement(join(215922..216862,217183..217684))
location: region:215922-217684:-1
so has part: feature:217183-217684:-1:exon
so has part: feature:215922-216862:-1:exon

XP_020222861.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:217183-217684:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:215922-216862:-1:exon

LOC109804735
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804735
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 256389..266730
location: region:256389-266730:1
so has part: feature:256389-266730:1:exon
subclass of: SO_0000010

109804735
type: Gene
SIO_000068: ncbigene

position:256389:1
position: 256389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266730:1
position: 266730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256389-266730:1:exon

LOC109804735
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804735
product: alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_020366568.2
SIO_010081: LOC109804735
subclass of: SO_0000673
so part of: LOC109804735
location: join(256389..256785,258617..258846,258931..259032,259423..259599,259719..259994,260351..260622,260761..260878,260960..261385,261771..261923,262603..262731,263665..263901,264384..264460,265377..265563,265808..266008,266368..266730)
location: region:256389-266730:1
so has part: feature:256389-256785:1:exon
so has part: feature:258617-258846:1:exon
so has part: feature:258931-259032:1:exon
so has part: feature:259423-259599:1:exon
so has part: feature:259719-259994:1:exon
so has part: feature:260351-260622:1:exon
so has part: feature:260761-260878:1:exon
so has part: feature:260960-261385:1:exon
so has part: feature:261771-261923:1:exon
so has part: feature:262603-262731:1:exon
so has part: feature:263665-263901:1:exon
so has part: feature:264384-264460:1:exon
so has part: feature:265377-265563:1:exon
so has part: feature:265808-266008:1:exon
so has part: feature:266368-266730:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:256389-256785:1:exon

position:256785:1
position: 256785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:258617-258846:1:exon

position:258617:1
position: 258617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258846:1
position: 258846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:258931-259032:1:exon

position:258931:1
position: 258931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259032:1
position: 259032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:259423-259599:1:exon

position:259423:1
position: 259423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259599:1
position: 259599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:259719-259994:1:exon

position:259719:1
position: 259719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259994:1
position: 259994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:260351-260622:1:exon

position:260351:1
position: 260351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260622:1
position: 260622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:260761-260878:1:exon

position:260761:1
position: 260761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260878:1
position: 260878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:260960-261385:1:exon

position:260960:1
position: 260960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261385:1
position: 261385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:261771-261923:1:exon

position:261771:1
position: 261771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261923:1
position: 261923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:262603-262731:1:exon

position:262603:1
position: 262603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262731:1
position: 262731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:263665-263901:1:exon

position:263665:1
position: 263665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263901:1
position: 263901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:264384-264460:1:exon

position:264384:1
position: 264384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264460:1
position: 264460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:265377-265563:1:exon

position:265377:1
position: 265377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265563:1
position: 265563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:265808-266008:1:exon

position:265808:1
position: 265808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266008:1
position: 266008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:266368-266730:1:exon

position:266368:1
position: 266368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109804735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804735
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic
translation: MPSTMRFSATSTAAGPLPRRSSVAGFIAVASRSSAKSRLRFIGRNANLSLRRSSFAAVKCVLQDPLAQQQEPTTSLTPDASSIASSIKYHAEFTPLFSPENFNLPQAFFATAQSVRDALIINWNATYDYYEKLNVKQAYYLSMEFLQGRALLNAIGNLELTGPYAEALSKLGYKLENVACQEPDAALGNGGLGRLASCFLDSLATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLEMGSPWEIVRNDVSYPVKFYGKVVSGSDGKKHWIGGEDIKAVAHDVPIPGYKTKTTINLRLWSTKAASEEFDLYAFNAGRHTEASEALANAEKICYILYPGDESIEGKILRLKQQYTLCSASLQDIIARFERRSGANVNWEEFPEKVAVQMNDTHPTLCIPELMRILLDVKGLSWKDAWNITQRSVAYTNHTVLPEALEKWSLDLMQKLLPRHIEIIEMIDEELIRTIIAEYGTADSDLLENKLKEMRILENVELPAEFADILVKSKVDTDIPSEELQNSEQVEEQEQEQEEKDDDELEEAIAKKNGTDESSIEDKKEKLPEPVPEPPKLVRMANLCVVGGHAVNGVAEIHSEIVKDEVFNAFYKLWPEKFQNKTNGVTPRRWISFCNPDLSKIITEWVGTDDWVLNTEKLAELRKFVDNEDLQVQWREAKRRNKVRVAAFIKEKTGYSVSPDSMFDIQVKRIHEYKRQLLNILGIVYRYKKMKEMSAAERKANFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVVFVPDYNVSVAEMLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIREEVGADNFFLFGAKAHEIAGLRKERAEGKFVPDPRFEEVKEFVRSGVFGSYNYDELIGSLEGNEGFGRADYFLVGKDFPSYIECQEKVDEAYRDQKKWTRMSILNTAGSYKFSSDRTIHEYAGEIWNIEPVKLPERST
SIO_010081: LOC109804735
subclass of: SO_0000673
so part of: LOC109804735
location: join(256575..256785,258617..258846,258931..259032,259423..259599,259719..259994,260351..260622,260761..260878,260960..261385,261771..261923,262603..262731,263665..263901,264384..264460,265377..265563,265808..266008,266368..266496)
location: region:256575-266496:1
so has part: feature:256575-256785:1:exon
so has part: feature:258617-258846:1:exon
so has part: feature:258931-259032:1:exon
so has part: feature:259423-259599:1:exon
so has part: feature:259719-259994:1:exon
so has part: feature:260351-260622:1:exon
so has part: feature:260761-260878:1:exon
so has part: feature:260960-261385:1:exon
so has part: feature:261771-261923:1:exon
so has part: feature:262603-262731:1:exon
so has part: feature:263665-263901:1:exon
so has part: feature:264384-264460:1:exon
so has part: feature:265377-265563:1:exon
so has part: feature:265808-266008:1:exon
so has part: feature:266368-266496:1:exon

XP_020222157.1
type: Protein
SIO_000068: ncbiprotein

position:256575:1
position: 256575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266496:1
position: 266496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256575-256785:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:258617-258846:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:258931-259032:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:259423-259599:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:259719-259994:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:260351-260622:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:260761-260878:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260960-261385:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:261771-261923:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:262603-262731:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:263665-263901:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:264384-264460:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:265377-265563:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:265808-266008:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:266368-266496:1:exon

LOC109805126
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109805126
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(270627..273754)
location: region:270627-273754:-1
so has part: feature:270627-273754:-1:exon
subclass of: SO_0000010

109805126
type: Gene
SIO_000068: ncbigene

position:270627:-1
position: 270627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273754:-1
position: 273754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270627-273754:-1:exon

LOC109805126
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805126
product: UDP-glucose 6-dehydrogenase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_020367110.2
SIO_010081: LOC109805126
subclass of: SO_0000673
so part of: LOC109805126
location: complement(join(270627..272302,273562..273754))
location: region:270627-273754:-1
so has part: feature:273562-273754:-1:exon
so has part: feature:270627-272302:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:273562-273754:-1:exon

position:273562:-1
position: 273562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:270627-272302:-1:exon

position:272302:-1
position: 272302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109805126
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805126
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-glucose 6-dehydrogenase 1
translation: MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISKSRIAAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVYEADIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNGKGIKFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAIQTLKNVYAHWVPEGRILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGANVTQVSYAVGTDTRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKINDYQKSRFVNRVVSSMFNTVATKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLWMNKFDWDHPIHLQPTSPTTEKKVSVVWDAYEATKDADGVCILTEWDEFKTLDYQKVYDNMRKPAFVFDGRNIVDVDKLREIGFIVYSIGKPLDPWLKDMPAVA
SIO_010081: LOC109805126
subclass of: SO_0000673
so part of: LOC109805126
location: complement(270842..272284)
location: region:270842-272284:-1
so has part: feature:270842-272284:-1:exon

XP_020222699.1
type: Protein
SIO_000068: ncbiprotein

position:270842:-1
position: 270842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272284:-1
position: 272284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270842-272284:-1:exon

LOC109804904
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804904
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 289541..293324
location: region:289541-293324:1
so has part: feature:289541-293324:1:exon
subclass of: SO_0000010

109804904
type: Gene
SIO_000068: ncbigene

position:289541:1
position: 289541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293324:1
position: 293324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289541-293324:1:exon

LOC109804904
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804904
product: protein TPX2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020366821.2
SIO_010081: LOC109804904
subclass of: SO_0000673
so part of: LOC109804904
location: join(289541..290025,291940..292016,292213..292311,292532..292591,292700..292794,292930..293324)
location: region:289541-293324:1
so has part: feature:289541-290025:1:exon
so has part: feature:291940-292016:1:exon
so has part: feature:292213-292311:1:exon
so has part: feature:292532-292591:1:exon
so has part: feature:292700-292794:1:exon
so has part: feature:292930-293324:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:289541-290025:1:exon

position:290025:1
position: 290025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:291940-292016:1:exon

position:291940:1
position: 291940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292016:1
position: 292016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:292213-292311:1:exon

position:292213:1
position: 292213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292311:1
position: 292311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:292532-292591:1:exon

position:292532:1
position: 292532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292591:1
position: 292591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:292700-292794:1:exon

position:292700:1
position: 292700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292794:1
position: 292794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:292930-293324:1:exon

position:292930:1
position: 292930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109804904
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804904
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein TPX2
translation: MELSSTTDQPLSTPSKKPSKNTENLNPNVPHHHHSPFKSPNSKSPALRPSKSNNSNPVARSPQNRIRQRKFVVAKKKNQKGSQNDAVLCKCMHNGGAKCVCVAYQKRRIEEQKRRPTPYIQGLPWTTDEPECLLKPSVKESTRPIDLKLHSDIRAIDRAEFDQQVAEKMNFIEQLKLERERQQKLEEEEEIKRLRKELIPKAQPMPYFDRPFVPRRSMKHPTIPREPKFHMPQHKKVKCLLSWNDMDPYSSYLN
SIO_010081: LOC109804904
subclass of: SO_0000673
so part of: LOC109804904
location: join(289710..290025,291940..292016,292213..292311,292532..292591,292700..292794,292930..293047)
location: region:289710-293047:1
so has part: feature:289710-290025:1:exon
so has part: feature:291940-292016:1:exon
so has part: feature:292213-292311:1:exon
so has part: feature:292532-292591:1:exon
so has part: feature:292700-292794:1:exon
so has part: feature:292930-293047:1:exon

XP_020222410.1
type: Protein
SIO_000068: ncbiprotein

position:289710:1
position: 289710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293047:1
position: 293047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289710-290025:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:291940-292016:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:292213-292311:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:292532-292591:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:292700-292794:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:292930-293047:1:exon

LOC109805071
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109805071
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(296541..298521)
location: region:296541-298521:-1
so has part: feature:296541-298521:-1:exon
subclass of: SO_0000010

109805071
type: Gene
SIO_000068: ncbigene

position:296541:-1
position: 296541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298521:-1
position: 298521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296541-298521:-1:exon

LOC109805071
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805071
product: 40S ribosomal protein S19-1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_020367020.2
SIO_010081: LOC109805071
subclass of: SO_0000673
so part of: LOC109805071
location: complement(join(296541..296860,297120..297303,297443..297533,298363..298521))
location: region:296541-298521:-1
so has part: feature:298363-298521:-1:exon
so has part: feature:297443-297533:-1:exon
so has part: feature:297120-297303:-1:exon
so has part: feature:296541-296860:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:298363-298521:-1:exon

position:298363:-1
position: 298363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:297443-297533:-1:exon

position:297443:-1
position: 297443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297533:-1
position: 297533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:297120-297303:-1:exon

position:297120:-1
position: 297120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297303:-1
position: 297303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:296541-296860:-1:exon

position:296860:-1
position: 296860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109805071
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805071
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S19-1
translation: MATARTVKDVSPHDFVKAYASHLKRSGKMELPEWTDIVKTAKFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFQRIYGGSKRNGSRPPHFCKSSGAIARHILIQLQNMNIVEIDTKGGRKITSSGRRDLDQVAGRIVVAA
SIO_010081: LOC109805071
subclass of: SO_0000673
so part of: LOC109805071
location: complement(join(296788..296860,297120..297303,297443..297533,298363..298446))
location: region:296788-298446:-1
so has part: feature:298363-298446:-1:exon
so has part: feature:297443-297533:-1:exon
so has part: feature:297120-297303:-1:exon
so has part: feature:296788-296860:-1:exon

XP_020222609.1
type: Protein
SIO_000068: ncbiprotein

position:296788:-1
position: 296788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298446:-1
position: 298446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298363-298446:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:297443-297533:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:297120-297303:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:296788-296860:-1:exon

LOC109804905
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804905
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 315045..318336
location: region:315045-318336:1
so has part: feature:315045-318336:1:exon
subclass of: SO_0000010

109804905
type: Gene
SIO_000068: ncbigene

position:315045:1
position: 315045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318336:1
position: 318336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315045-318336:1:exon

LOC109804905
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804905
product: biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_020366822.2
SIO_010081: LOC109804905
subclass of: SO_0000673
so part of: LOC109804905
location: join(315045..315499,315993..316156,316271..316589,316996..317067,317914..317979,318088..318336)
location: region:315045-318336:1
so has part: feature:315045-315499:1:exon
so has part: feature:315993-316156:1:exon
so has part: feature:316271-316589:1:exon
so has part: feature:316996-317067:1:exon
so has part: feature:317914-317979:1:exon
so has part: feature:318088-318336:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:315045-315499:1:exon

position:315499:1
position: 315499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:315993-316156:1:exon

position:315993:1
position: 315993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316156:1
position: 316156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:316271-316589:1:exon

position:316271:1
position: 316271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316589:1
position: 316589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:316996-317067:1:exon

position:316996:1
position: 316996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317067:1
position: 317067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:317914-317979:1:exon

position:317914:1
position: 317914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317979:1
position: 317979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:318088-318336:1:exon

position:318088:1
position: 318088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109804905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804905
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic
translation: MASFSVPCPKCPSSFPLGLKSQKASFQSGLRLKPSISFGSLSVESVASRIQAANVENSNSASIVVNGPKVASSKEKQDQNGKVSGGTSANESSITTFMSQVSDLVKLVDSRDIVELQLKQSNCELMIRKKEALLPPPVVAPASSPMQYATFPSPPMPPLATASAPTSSLTPKAAPSLPTPKKASTFSHPPIKSPMAGTFYKSPAPGEPPFVKVGDKVKKGQVVCIIEAMKLMNEIEADQSGTVAEILAEDGKPVSVDTPLFVIAP
SIO_010081: LOC109804905
subclass of: SO_0000673
so part of: LOC109804905
location: join(315347..315499,315993..316156,316271..316589,316996..317067,317914..317979,318088..318111)
location: region:315347-318111:1
so has part: feature:315347-315499:1:exon
so has part: feature:315993-316156:1:exon
so has part: feature:316271-316589:1:exon
so has part: feature:316996-317067:1:exon
so has part: feature:317914-317979:1:exon
so has part: feature:318088-318111:1:exon

XP_020222411.1
type: Protein
SIO_000068: ncbiprotein

position:315347:1
position: 315347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318111:1
position: 318111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315347-315499:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:315993-316156:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:316271-316589:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:316996-317067:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:317914-317979:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:318088-318111:1:exon

LOC109805368
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109805368
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(324158..342541)
location: region:324158-342541:-1
so has part: feature:324158-342541:-1:exon
subclass of: SO_0000010

109805368
type: Gene
SIO_000068: ncbigene

position:324158:-1
position: 324158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342541:-1
position: 342541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324158-342541:-1:exon

LOC109805368
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805368
product: sister chromatid cohesion protein SCC2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_020367423.2
SIO_010081: LOC109805368
subclass of: SO_0000673
so part of: LOC109805368
location: complement(join(324158..324692,324783..324908,325040..325132,325548..325938,326021..326311,326389..326522,327050..327283,328208..328312,328391..328552,330090..330198,330630..330799,334141..334293,334375..334695,335049..335216,335351..335509,335619..335669,335746..335956,336035..336549,336647..337078,337207..337393,337512..337608,337922..338033,338367..338474,339392..339648,340242..340332,340414..340550,340961..341082,342048..342541))
location: region:324158-342541:-1
so has part: feature:342048-342541:-1:exon
so has part: feature:340961-341082:-1:exon
so has part: feature:340414-340550:-1:exon
so has part: feature:340242-340332:-1:exon
so has part: feature:339392-339648:-1:exon
so has part: feature:338367-338474:-1:exon
so has part: feature:337922-338033:-1:exon
so has part: feature:337512-337608:-1:exon
so has part: feature:337207-337393:-1:exon
so has part: feature:336647-337078:-1:exon
so has part: feature:336035-336549:-1:exon
so has part: feature:335746-335956:-1:exon
so has part: feature:335619-335669:-1:exon
so has part: feature:335351-335509:-1:exon
so has part: feature:335049-335216:-1:exon
so has part: feature:334375-334695:-1:exon
so has part: feature:334141-334293:-1:exon
so has part: feature:330630-330799:-1:exon
so has part: feature:330090-330198:-1:exon
so has part: feature:328391-328552:-1:exon
so has part: feature:328208-328312:-1:exon
so has part: feature:327050-327283:-1:exon
so has part: feature:326389-326522:-1:exon
so has part: feature:326021-326311:-1:exon
so has part: feature:325548-325938:-1:exon
so has part: feature:325040-325132:-1:exon
so has part: feature:324783-324908:-1:exon
so has part: feature:324158-324692:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:342048-342541:-1:exon

position:342048:-1
position: 342048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:340961-341082:-1:exon

position:340961:-1
position: 340961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341082:-1
position: 341082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:340414-340550:-1:exon

position:340414:-1
position: 340414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340550:-1
position: 340550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:340242-340332:-1:exon

position:340242:-1
position: 340242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340332:-1
position: 340332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:339392-339648:-1:exon

position:339392:-1
position: 339392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339648:-1
position: 339648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:338367-338474:-1:exon

position:338367:-1
position: 338367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338474:-1
position: 338474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:337922-338033:-1:exon

position:337922:-1
position: 337922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338033:-1
position: 338033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:337512-337608:-1:exon

position:337512:-1
position: 337512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337608:-1
position: 337608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:337207-337393:-1:exon

position:337207:-1
position: 337207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337393:-1
position: 337393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:336647-337078:-1:exon

position:336647:-1
position: 336647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337078:-1
position: 337078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:336035-336549:-1:exon

position:336035:-1
position: 336035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336549:-1
position: 336549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:335746-335956:-1:exon

position:335746:-1
position: 335746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335956:-1
position: 335956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:335619-335669:-1:exon

position:335619:-1
position: 335619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335669:-1
position: 335669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:335351-335509:-1:exon

position:335351:-1
position: 335351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335509:-1
position: 335509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:335049-335216:-1:exon

position:335049:-1
position: 335049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335216:-1
position: 335216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:334375-334695:-1:exon

position:334375:-1
position: 334375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334695:-1
position: 334695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:334141-334293:-1:exon

position:334141:-1
position: 334141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334293:-1
position: 334293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:330630-330799:-1:exon

position:330630:-1
position: 330630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330799:-1
position: 330799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:330090-330198:-1:exon

position:330090:-1
position: 330090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330198:-1
position: 330198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:328391-328552:-1:exon

position:328391:-1
position: 328391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328552:-1
position: 328552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:328208-328312:-1:exon

position:328208:-1
position: 328208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328312:-1
position: 328312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:327050-327283:-1:exon

position:327050:-1
position: 327050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327283:-1
position: 327283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:326389-326522:-1:exon

position:326389:-1
position: 326389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326522:-1
position: 326522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:326021-326311:-1:exon

position:326021:-1
position: 326021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326311:-1
position: 326311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:325548-325938:-1:exon

position:325548:-1
position: 325548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325938:-1
position: 325938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:325040-325132:-1:exon

position:325040:-1
position: 325040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325132:-1
position: 325132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:324783-324908:-1:exon

position:324783:-1
position: 324783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324908:-1
position: 324908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:324158-324692:-1:exon

position:324692:-1
position: 324692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109805368
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805368
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sister chromatid cohesion protein SCC2
translation: MSFPFPPGVVAASGHRGIGLSNTIHSEVASYLPLPLLPVWCGATVQDPPLVESPERLNHVDVLSQSGKIAELLRRADMSYLKLTDDAKVVPNKDDDEPPLELHDEVLRCYPEAFDYDYSAAGPVKEQISGSALPEKRQSESSLPIQSQIPKDYNPTHTHQLDNVSTNDISTLSSKKSKVKKKSGDGISIAPDSAELQGAHIERFYEFLEDLCNKSEFHGDDRDEAEWLPLPLSDLRLLVNEITSICEKKLLHLVPVEVLVRLLTVLDHQIHRAEGLSIEECDNSDSELVSSVLIALESIHAALAVMAHTDMPKQLYKEEIIERILEFSRHQIMDVMCACDPSYRALHRPSENTAFEVDDYEENDAEFGSASKKRRTSKASKSKKSASSRLSTAVNTILQKLCTVLGLLKDLLLIERLSDSCILQLVKTSITTFLVDNIQLLQLKAISLLSAIFYLYTQHRTYVIDEVVQLLWKLPFSKRALRSYHIREEEQRQIQMVTALLIQLIHCSANLPDALRKASNGNAVLEASVDASYPTKCHEATTEACCLFWSRVLQRFASVKTQDASELKTIIENLVTDLLTTLNLPEYPASAPILEVLCVLLLQNAGPKSKDVSVRSMAIDILGTIAARLKRDALVCSQEKFWILQDLPSQDAATQHLPNDACCVCLGGRVENLFICHDCQRLFHADCLGIKEHEVSSRNWSCQTCICHKQLLVLQSCCNSQSKNDVKKNRNVSKKTEIPKHEIVQQFLLNFLQDATSADDLHLFICWFYLCLWYKDDSNCQQKSIYYITRMKSKIIVRDSGTVSSMLTRDSIKKITLALGQNSSFCRGFDKIIHTLLTSMRENSPVIRAKALKAISIIVEADPEVLGDKRIQSAVEGRFCDSAISVREAALELVGRHIASHPDVGFKYFEKIAERIKDTGLSVRKRAIKIIRDMCTSNANFSGFTRACIEIISRVSDDEASIQDLVCKTFNEFWFEEPPALQTQVFGDGSTVPLEIVKKTEQIVEMLREMRNNQPVIPINQLLVTVIKRNLSLDFLPQSAKAIGVNPGSLATVRKRCEMMCKCLLEKILQVDEMNSDEVEVRALPYVLVLHAFCLVDPTLCAPASNPSQFVVTLQPYLKTQVDNRMVAQLLESILFIIDAVLPLLGKLPPSIVGELEQDLKLMIVRHSFLTVVHACIKCLCSVSKMAGKGAAVVEQLIQYFFKCLDTQAVDNKQKVGRSLFCLGLLFRYGNQLLASTSNKLIDVGSSLRLFLKYLSMEDFVIKVRSLQALGFVLIARPEYMLENDVGKIMEETLSSAADTRLKIQGLQNMFEYLLDAESQIGTDKEDGNVANYSVGAGQIVPVAAGAGDTNICGGIIQLYWDNILGRCLDFCEQVRQSALKIVEVVLRQGLVHPITCVPYLIALETDPLESNSKLAHHLLMNMNEKYPAFFESRLGDGLQMSFMFMQSICGSSENFDHRIQSKIPISGKGKPDAGLLAQAKLGVSRIYKLIRGNRVSRNKFLSSIVRKFDNPRWNKLVIAFLTYCTEVLALLPFISPDEPLYLIYAINRIVQVREGPLEANFKAWCSSILRYSTPYGNGMCQQGPEEPTVNTQVMSVDLNGTFQQNVDAQPNSNDMRSLDLNGSNHQLPEANLHAVGFTDSVSFSKDDLEKVQADCLSAIALQLLLKLKRHLKIMYSLDDARCQAYSPNEQPKPGEVISRQNIALNIDESQFSLPTNPQELVQRYQEFKHALREDTMDYRLYTANIKRKRPTTTPRKVQVRKSAHVAGARVAGGYDEDEDDDDWTGGSATRNINFSGRRSSLRSSRQY
SIO_010081: LOC109805368
subclass of: SO_0000673
so part of: LOC109805368
location: complement(join(324444..324692,324783..324908,325040..325132,325548..325938,326021..326311,326389..326522,327050..327283,328208..328312,328391..328552,330090..330198,330630..330799,334141..334293,334375..334695,335049..335216,335351..335509,335619..335669,335746..335956,336035..336549,336647..337078,337207..337393,337512..337608,337922..338033,338367..338474,339392..339648,340242..340332,340414..340550,340961..341082,342048..342289))
location: region:324444-342289:-1
so has part: feature:342048-342289:-1:exon
so has part: feature:340961-341082:-1:exon
so has part: feature:340414-340550:-1:exon
so has part: feature:340242-340332:-1:exon
so has part: feature:339392-339648:-1:exon
so has part: feature:338367-338474:-1:exon
so has part: feature:337922-338033:-1:exon
so has part: feature:337512-337608:-1:exon
so has part: feature:337207-337393:-1:exon
so has part: feature:336647-337078:-1:exon
so has part: feature:336035-336549:-1:exon
so has part: feature:335746-335956:-1:exon
so has part: feature:335619-335669:-1:exon
so has part: feature:335351-335509:-1:exon
so has part: feature:335049-335216:-1:exon
so has part: feature:334375-334695:-1:exon
so has part: feature:334141-334293:-1:exon
so has part: feature:330630-330799:-1:exon
so has part: feature:330090-330198:-1:exon
so has part: feature:328391-328552:-1:exon
so has part: feature:328208-328312:-1:exon
so has part: feature:327050-327283:-1:exon
so has part: feature:326389-326522:-1:exon
so has part: feature:326021-326311:-1:exon
so has part: feature:325548-325938:-1:exon
so has part: feature:325040-325132:-1:exon
so has part: feature:324783-324908:-1:exon
so has part: feature:324444-324692:-1:exon

XP_020223012.1
type: Protein
SIO_000068: ncbiprotein

position:324444:-1
position: 324444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342289:-1
position: 342289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:342048-342289:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:340961-341082:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:340414-340550:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:340242-340332:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:339392-339648:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:338367-338474:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:337922-338033:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:337512-337608:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:337207-337393:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:336647-337078:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:336035-336549:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:335746-335956:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:335619-335669:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:335351-335509:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:335049-335216:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:334375-334695:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:334141-334293:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:330630-330799:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:330090-330198:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:328391-328552:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:328208-328312:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:327050-327283:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:326389-326522:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:326021-326311:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:325548-325938:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:325040-325132:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:324783-324908:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:324444-324692:-1:exon

LOC109804896
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804896
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(435330..437624)
location: region:435330-437624:-1
so has part: feature:435330-437624:-1:exon
subclass of: SO_0000010

109804896
type: Gene
SIO_000068: ncbigene

position:435330:-1
position: 435330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:437624:-1
position: 437624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435330-437624:-1:exon

LOC109804896
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804896
product: uncharacterized LOC109804896
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020366813.2
SIO_010081: LOC109804896
subclass of: SO_0000673
so part of: LOC109804896
location: complement(435330..437624)
location: region:435330-437624:-1
so has part: feature:435330-437624:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:435330-437624:-1:exon

LOC109804896
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804896
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109804896
translation: MGDIVKQILAKPIQLADQVTKAADEATSFKQACADLKAKTEKLALMLRQAARASSDLYERPTRRIIEETEQVLDKALSLVLRCRGNALMKRVFTLNPGAAFRKVSSHLENSIGDISWLLRVSAPADGLGGDYLGGLPPIAANEPILCLIWEQIAVLHTGPTEERADAAASLASLASGSQRYGKLILEEGGVGPLLKLLKEGKGEGQENAARAIGLLGRDPESVEHVIHVGACSVFAKTLKEGPMKVQAMVAWAVSEFAKNHPKCQDLFAQHNIIRLLVGHLAFETVEEHSKYAIVSMKPNSIHALVIASKKEDPFHPLDKQPPVPHPLGERPRNLHRVITSTIAMHAATKHGNETNPNPNQNQNQNQNQNQNHQRNYSHSGINMKGRDLEDPGTKANMKEMAAMALWHLAKGNSANCRSITESRALLCFAVLLEKGTEAVQYNSAMAVMEIAAVAEKDAELRKSAFKPNSPACKAVVDQVVKIMEKADSKLLVPCIKTIGNLARTFKATESRMIGPLVRLLDEREAEVLREAAIALTKFACTENYLHVDHSKAIISAGGAKHLIQLVYFGEEMVQIPALVLLSYIAMHVPDSEELAQAEVLGVLEWASKQSSIAHDQTLEALLLEAKSKLELYQSRGPRGFHKLLP
SIO_010081: LOC109804896
subclass of: SO_0000673
so part of: LOC109804896
location: complement(435527..437467)
location: region:435527-437467:-1
so has part: feature:435527-437467:-1:exon

XP_020222402.1
type: Protein
SIO_000068: ncbiprotein

position:435527:-1
position: 435527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:437467:-1
position: 437467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435527-437467:-1:exon

LOC109804908
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804908
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(470389..>471030)
location: region:470389-471030:-1
so has part: feature:470389-471030:-1:exon
subclass of: SO_0000010

109804908
type: Gene
SIO_000068: ncbigene

position:470389:-1
position: 470389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471030:-1
position: 471030
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:470389-471030:-1:exon

LOC109804908
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804908
product: chaperone protein dnaJ 11, chloroplastic
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020366826.2
SIO_010081: LOC109804908
subclass of: SO_0000673
so part of: LOC109804908
location: complement(470389..>471030)
location: region:470389-471030:-1
so has part: feature:470389-471030:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:470389-471030:-1:exon

LOC109804908
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804908
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chaperone protein dnaJ 11, chloroplastic
translation: PPPPPPADARSSWTDQPRPSYLNSSCSSLYDILGIPAAASNQEIKAAYRRLARACHPDVAAIDRKNSSADEFMKIHAAYSTLSDPDKRANYDRSLFRRQRPLSKAAAFSGYTSRNWETDQCW
SIO_010081: LOC109804908
subclass of: SO_0000673
so part of: LOC109804908
location: complement(470662..>471030)
location: region:470662-471030:-1
so has part: feature:470662-471030:-1:exon

XP_020222415.1
type: Protein
SIO_000068: ncbiprotein

position:470662:-1
position: 470662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:470662-471030:-1:exon

LOC109804806
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804806
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(485170..490771)
location: region:485170-490771:-1
so has part: feature:485170-490771:-1:exon
subclass of: SO_0000010

109804806
type: Gene
SIO_000068: ncbigene

position:485170:-1
position: 485170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:490771:-1
position: 490771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485170-490771:-1:exon

LOC109804806
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804806
product: calcium-dependent protein kinase 28
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_020366667.2
SIO_010081: LOC109804806
subclass of: SO_0000673
so part of: LOC109804806
location: complement(join(485170..485810,485890..486063,486278..486340,486586..486693,486788..486903,487937..488063,488231..488400,488519..488597,488683..488794,488976..489017,489248..489378,490116..490771))
location: region:485170-490771:-1
so has part: feature:490116-490771:-1:exon
so has part: feature:489248-489378:-1:exon
so has part: feature:488976-489017:-1:exon
so has part: feature:488683-488794:-1:exon
so has part: feature:488519-488597:-1:exon
so has part: feature:488231-488400:-1:exon
so has part: feature:487937-488063:-1:exon
so has part: feature:486788-486903:-1:exon
so has part: feature:486586-486693:-1:exon
so has part: feature:486278-486340:-1:exon
so has part: feature:485890-486063:-1:exon
so has part: feature:485170-485810:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:490116-490771:-1:exon

position:490116:-1
position: 490116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:489248-489378:-1:exon

position:489248:-1
position: 489248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:489378:-1
position: 489378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:488976-489017:-1:exon

position:488976:-1
position: 488976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:489017:-1
position: 489017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:488683-488794:-1:exon

position:488683:-1
position: 488683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:488794:-1
position: 488794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:488519-488597:-1:exon

position:488519:-1
position: 488519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:488597:-1
position: 488597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:488231-488400:-1:exon

position:488231:-1
position: 488231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:488400:-1
position: 488400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:487937-488063:-1:exon

position:487937:-1
position: 487937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:488063:-1
position: 488063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:486788-486903:-1:exon

position:486788:-1
position: 486788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486903:-1
position: 486903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:486586-486693:-1:exon

position:486586:-1
position: 486586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486693:-1
position: 486693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:486278-486340:-1:exon

position:486278:-1
position: 486278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486340:-1
position: 486340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:485890-486063:-1:exon

position:485890:-1
position: 485890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486063:-1
position: 486063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:485170-485810:-1:exon

position:485810:-1
position: 485810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109804806
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804806
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-dependent protein kinase 28
translation: MGMCFSATKVSGSNSNNTSNRNRKCSAAPLETAPAPAQKKQQTSHGQRRRATEDSQKNARAKDKAGARRQGGHVPCGKRTDFGYEKDFDKKFSLGKLLGHGQFGYTYVGIDKVNGDRVAVKRLEKAKMVLPIAVEDVKREVKILKELTGHENVVQFYNAFEDDSYVYIVMELCEGGELLDRILSKKDSRYTEKDAAVVVRQMLKVAAECHLHGLVHRDMKPENFLFKSTREDSPLKATDFGLSDFIKPGKRFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPTISNPAKDFVKKLLVKDPRARYTAAQALSHPWVKEGGEALEIPIDISVLNNMRQFVKYSRLKQFALRALASTLNEGELSDLKDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDSNTDGLVDFTEFVAATLHVHQLEEHDSDKWHQRSQAAFEKFDLDKDGYITPDELRMHTGLRGSIDPLLEEADIDKDGKISLPEFRRLLRTASIGSRNIMSPGRSHHRKI
SIO_010081: LOC109804806
subclass of: SO_0000673
so part of: LOC109804806
location: complement(join(485649..485810,485890..486063,486278..486340,486586..486693,486788..486903,487937..488063,488231..488400,488519..488597,488683..488794,488976..489017,489248..489378,490116..490496))
location: region:485649-490496:-1
so has part: feature:490116-490496:-1:exon
so has part: feature:489248-489378:-1:exon
so has part: feature:488976-489017:-1:exon
so has part: feature:488683-488794:-1:exon
so has part: feature:488519-488597:-1:exon
so has part: feature:488231-488400:-1:exon
so has part: feature:487937-488063:-1:exon
so has part: feature:486788-486903:-1:exon
so has part: feature:486586-486693:-1:exon
so has part: feature:486278-486340:-1:exon
so has part: feature:485890-486063:-1:exon
so has part: feature:485649-485810:-1:exon

XP_020222256.1
type: Protein
SIO_000068: ncbiprotein

position:485649:-1
position: 485649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:490496:-1
position: 490496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:490116-490496:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:489248-489378:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:488976-489017:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:488683-488794:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:488519-488597:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:488231-488400:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:487937-488063:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:486788-486903:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:486586-486693:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:486278-486340:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:485890-486063:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:485649-485810:-1:exon

LOC109804909
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804909
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(494506..500311)
location: region:494506-500311:-1
so has part: feature:494506-500311:-1:exon

109804909
type: Gene
SIO_000068: ncbigene

position:494506:-1
position: 494506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500311:-1
position: 500311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494506-500311:-1:exon

LOC109804909
type: Exon
subclass of: SO_0000147
RO_0002162: 3821
gene: LOC109804909
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 17% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109804909
subclass of: SO_0000673
so part of: LOC109804909
location: complement(494506..494533)
location: region:494506-494533:-1
so has part: feature:494506-494533:-1:exon

position:494533:-1
position: 494533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494506-494533:-1:exon

LOC109804909
type: Exon
subclass of: SO_0000147
RO_0002162: 3821
gene: LOC109804909
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 17% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109804909
subclass of: SO_0000673
so part of: LOC109804909
location: complement(498242..498362)
location: region:498242-498362:-1
so has part: feature:498242-498362:-1:exon

position:498242:-1
position: 498242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:498362:-1
position: 498362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:498242-498362:-1:exon

LOC109804909
type: Exon
subclass of: SO_0000147
RO_0002162: 3821
gene: LOC109804909
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 17% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109804909
subclass of: SO_0000673
so part of: LOC109804909
location: complement(498784..498789)
location: region:498784-498789:-1
so has part: feature:498784-498789:-1:exon

position:498784:-1
position: 498784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:498789:-1
position: 498789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:498784-498789:-1:exon

LOC109804909
type: Exon
subclass of: SO_0000147
RO_0002162: 3821
gene: LOC109804909
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 17% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109804909
subclass of: SO_0000673
so part of: LOC109804909
location: complement(498820..498931)
location: region:498820-498931:-1
so has part: feature:498820-498931:-1:exon

position:498820:-1
position: 498820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:498931:-1
position: 498931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:498820-498931:-1:exon

LOC109804909
type: Exon
subclass of: SO_0000147
RO_0002162: 3821
gene: LOC109804909
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 17% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109804909
subclass of: SO_0000673
so part of: LOC109804909
location: complement(499465..499900)
location: region:499465-499900:-1
so has part: feature:499465-499900:-1:exon

position:499465:-1
position: 499465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:499900:-1
position: 499900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:499465-499900:-1:exon

LOC109804909
type: Exon
subclass of: SO_0000147
RO_0002162: 3821
gene: LOC109804909
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 17% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109804909
subclass of: SO_0000673
so part of: LOC109804909
location: complement(500300..500311)
location: region:500300-500311:-1
so has part: feature:500300-500311:-1:exon

position:500300:-1
position: 500300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500300-500311:-1:exon

LOC109805214
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109805214
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 506213..507838
location: region:506213-507838:1
so has part: feature:506213-507838:1:exon
subclass of: SO_0000010

109805214
type: Gene
SIO_000068: ncbigene

position:506213:1
position: 506213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507838:1
position: 507838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:506213-507838:1:exon

LOC109805214
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805214
product: uncharacterized LOC109805214
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_020367229.2
SIO_010081: LOC109805214
subclass of: SO_0000673
so part of: LOC109805214
location: join(506213..506365,506463..506803,507193..507838)
location: region:506213-507838:1
so has part: feature:506213-506365:1:exon
so has part: feature:506463-506803:1:exon
so has part: feature:507193-507838:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:506213-506365:1:exon

position:506365:1
position: 506365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:506463-506803:1:exon

position:506463:1
position: 506463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506803:1
position: 506803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:507193-507838:1:exon

position:507193:1
position: 507193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109805214
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805214
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109805214
translation: METPSHTFAASKKIEDSEKNVSKSKSWGKQEDQSALIDITNDSPIVGLANGAIVETPLAMKRGSRVKHTPGSGEALLRGQVKTLLLKVEEEEVELSKFSLETMPPNKPQILNLYGLPSVIPLIPQVANHVFEGKNEENSESEKSLISRSLLLDFSDKSQISNASEECFSELSYEGVGSCSIEQSTEDDDASIWSTQVSASTHDEEDYSEEEKEYDEGEVLLDELCEVLNNISMNAGKHTRFVYNNDDEIVKEEVEENFGHSASSPNILRLKGLPTPKGKHLRFYDEEKGESVL
SIO_010081: LOC109805214
subclass of: SO_0000673
so part of: LOC109805214
location: join(506332..506365,506463..506803,507193..507699)
location: region:506332-507699:1
so has part: feature:506332-506365:1:exon
so has part: feature:506463-506803:1:exon
so has part: feature:507193-507699:1:exon

XP_020222818.1
type: Protein
SIO_000068: ncbiprotein

position:506332:1
position: 506332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507699:1
position: 507699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:506332-506365:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:506463-506803:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:507193-507699:1:exon

TRNAA-UGC
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: TRNAA-UGC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(510490..510562)
location: region:510490-510562:-1
so has part: feature:510490-510562:-1:exon
subclass of: SO_0000663

109805384
type: Gene
SIO_000068: ncbigene

position:510490:-1
position: 510490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:510562:-1
position: 510562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510490-510562:-1:exon

TRNAA-UGC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3821
gene: TRNAA-UGC
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA alanine (anticodon UGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(510527..510529),aa:Ala,seq:tgc)
SIO_010081: TRNAA-UGC
subclass of: SO_0000673
so part of: TRNAA-UGC
location: complement(510490..510562)
location: region:510490-510562:-1
so has part: feature:510490-510562:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:510490-510562:-1:exon

LOC109805072
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109805072
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(510998..513350)
location: region:510998-513350:-1
so has part: feature:510998-513350:-1:exon
subclass of: SO_0000010

109805072
type: Gene
SIO_000068: ncbigene

position:510998:-1
position: 510998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:513350:-1
position: 513350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510998-513350:-1:exon

LOC109805072
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805072
product: pentatricopeptide repeat-containing protein At5g15340, mitochondrial
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020367021.2
SIO_010081: LOC109805072
subclass of: SO_0000673
so part of: LOC109805072
location: complement(510998..513350)
location: region:510998-513350:-1
so has part: feature:510998-513350:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:510998-513350:-1:exon

LOC109805072
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805072
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pentatricopeptide repeat-containing protein At5g15340, mitochondrial
translation: MRWSHSSQQQCALILRSLLRRCARAAALRPGEQLHAAATVAGLLSSPSHFLLNALLHLYASCTLPSHARKLFDKIPHSHKDSVDYTALIRCSHPLDSLRFFLQMRQRALPVDGVALICALGACARLGDTNLVPQMHVGVVKLGFSGHTKVCNAVMDGYVKCGLVGEARRVFEEIEEPSVVSWTVVLEGVVKWEGVESGRVVFDEMPERNEVAWTVLIKGYVESGLTKEAFLLLKEMVFGDQRGLSVAEDVSPLQGESRFKFPQNEVPTFSARRFLEQKDMVFGNQLELGLMERASPFQHSELRFESPYEEVSTFSTHQDLEQKRFQRTTYVGNQKEKDTVFDCGFGFGLNNVTLCSVLSACSQSGDLSVGRWVHCYAVKAVGWDLGVMVGTSLVDMYAKCGRIMTALMVFRHMPRRNVVAWNAMLSGLAMHGMGKLVVDMFGCMVEEVKPDAVTFMALLSACSHSGLVEQGWQYFHDLQSVYGVRPEIEHYACTVDLLGRAGRLEEAEVLVRKMPIPPNEVVLGSLLGASYAHGKLRLGEKIMRELIQMDPLNTEYHILLSNMYALCGKVDQANSLRKVLKNRGIRKVPGMSSIYVDGQLHKFIAGDKSHPRTADIYMKLDDIICKLRLAGYVPNTNCQVLFGCSNGDDCMEALEEAEQVLFTHSEKLALCFGLMSTTPGSSLCIFKNLRICQDCHSAIKIASGIYKREIVVRDRYRFHSFKHGSCSCSDYW
SIO_010081: LOC109805072
subclass of: SO_0000673
so part of: LOC109805072
location: complement(511122..513320)
location: region:511122-513320:-1
so has part: feature:511122-513320:-1:exon

XP_020222610.1
type: Protein
SIO_000068: ncbiprotein

position:511122:-1
position: 511122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:513320:-1
position: 513320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511122-513320:-1:exon

LOC109805344
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109805344
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(514119..518427)
location: region:514119-518427:-1
so has part: feature:514119-518427:-1:exon
subclass of: SO_0000010

109805344
type: Gene
SIO_000068: ncbigene

position:514119:-1
position: 514119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518427:-1
position: 518427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:514119-518427:-1:exon

LOC109805344
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805344
product: vesicle transport v-SNARE 13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_020367389.2
SIO_010081: LOC109805344
subclass of: SO_0000673
so part of: LOC109805344
location: complement(join(514119..514577,514810..514980,516524..516712,516801..516859,517841..517956,518174..518427))
location: region:514119-518427:-1
so has part: feature:518174-518427:-1:exon
so has part: feature:517841-517956:-1:exon
so has part: feature:516801-516859:-1:exon
so has part: feature:516524-516712:-1:exon
so has part: feature:514810-514980:-1:exon
so has part: feature:514119-514577:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:518174-518427:-1:exon

position:518174:-1
position: 518174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:517841-517956:-1:exon

position:517841:-1
position: 517841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:517956:-1
position: 517956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:516801-516859:-1:exon

position:516801:-1
position: 516801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:516859:-1
position: 516859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:516524-516712:-1:exon

position:516524:-1
position: 516524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:516712:-1
position: 516712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:514810-514980:-1:exon

position:514810:-1
position: 514810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:514980:-1
position: 514980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:514119-514577:-1:exon

position:514577:-1
position: 514577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109805344
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805344
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vesicle transport v-SNARE 13
translation: MSNVFEGYERQYCELSANLAKKCTAAGALNGEQKKQKVSEIKSGIDEAEALIRKMDLEARSLQPNVKGVLLAKLREYKSDLNNLKSEIKKIVSGNLNPSARDELLESGMADAMTASADQRTRLMTSTDRLNKTSDRVKESRRTMLETEELGVSILHDLHSQRQSLLHAHNTLHGVDDNIGKSKKILTNMSRRMNKNKWIIGGIVLVLVIAIVLILYFKLSK
SIO_010081: LOC109805344
subclass of: SO_0000673
so part of: LOC109805344
location: complement(join(514425..514577,514810..514980,516524..516712,516801..516859,517841..517934))
location: region:514425-517934:-1
so has part: feature:517841-517934:-1:exon
so has part: feature:516801-516859:-1:exon
so has part: feature:516524-516712:-1:exon
so has part: feature:514810-514980:-1:exon
so has part: feature:514425-514577:-1:exon

XP_020222978.1
type: Protein
SIO_000068: ncbiprotein

position:514425:-1
position: 514425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:517934:-1
position: 517934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517841-517934:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:516801-516859:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:516524-516712:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:514810-514980:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:514425-514577:-1:exon

LOC109804910
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804910
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(521396..522093)
location: region:521396-522093:-1
so has part: feature:521396-522093:-1:exon
subclass of: SO_0000010

109804910
type: Gene
SIO_000068: ncbigene

position:521396:-1
position: 521396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522093:-1
position: 522093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:521396-522093:-1:exon

LOC109804910
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804910
product: SNF1-related protein kinase catalytic subunit alpha KIN10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XM_020366827.2
SIO_010081: LOC109804910
subclass of: SO_0000673
so part of: LOC109804910
location: complement(join(521396..521533,521627..521809,521891..522093))
location: region:521396-522093:-1
so has part: feature:521891-522093:-1:exon
so has part: feature:521627-521809:-1:exon
so has part: feature:521396-521533:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:521891-522093:-1:exon

position:521891:-1
position: 521891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:521627-521809:-1:exon

position:521627:-1
position: 521627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:521809:-1
position: 521809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:521396-521533:-1:exon

position:521533:-1
position: 521533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109804910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804910
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SNF1-related protein kinase catalytic subunit alpha KIN10
translation: MHHHIIRLYEVVETPTDIYVVMEYVKSGELFDYIVEKGRLQEDEARHFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKFNIKIADFGLSNIMRDGHFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENKQTYMLLWSM
SIO_010081: LOC109804910
subclass of: SO_0000673
so part of: LOC109804910
location: complement(join(521396..521533,521627..521809,521891..522043))
location: region:521396-522043:-1
so has part: feature:521891-522043:-1:exon
so has part: feature:521627-521809:-1:exon
so has part: feature:521396-521533:-1:exon

XP_020222416.1
type: Protein
SIO_000068: ncbiprotein

position:522043:-1
position: 522043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:521891-522043:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:521627-521809:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:521396-521533:-1:exon

LOC109805206
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109805206
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 527302..549396
location: region:527302-549396:1
so has part: feature:527302-549396:1:exon
subclass of: SO_0000010

109805206
type: Gene
SIO_000068: ncbigene

position:527302:1
position: 527302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:549396:1
position: 549396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527302-549396:1:exon

LOC109805206
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805206
product: CSC1-like protein HYP1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_020367217.2
SIO_010081: LOC109805206
subclass of: SO_0000673
so part of: LOC109805206
location: join(527302..527453,529134..529512,530135..530284,533385..533448,533556..533765,534940..535125,535853..536151,543043..543319,546610..546885,547535..547768,549013..549396)
location: region:527302-549396:1
so has part: feature:527302-527453:1:exon
so has part: feature:529134-529512:1:exon
so has part: feature:530135-530284:1:exon
so has part: feature:533385-533448:1:exon
so has part: feature:533556-533765:1:exon
so has part: feature:534940-535125:1:exon
so has part: feature:535853-536151:1:exon
so has part: feature:543043-543319:1:exon
so has part: feature:546610-546885:1:exon
so has part: feature:547535-547768:1:exon
so has part: feature:549013-549396:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:527302-527453:1:exon

position:527453:1
position: 527453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:529134-529512:1:exon

position:529134:1
position: 529134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:529512:1
position: 529512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:530135-530284:1:exon

position:530135:1
position: 530135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:530284:1
position: 530284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:533385-533448:1:exon

position:533385:1
position: 533385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:533448:1
position: 533448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:533556-533765:1:exon

position:533556:1
position: 533556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:533765:1
position: 533765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:534940-535125:1:exon

position:534940:1
position: 534940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:535125:1
position: 535125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:535853-536151:1:exon

position:535853:1
position: 535853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536151:1
position: 536151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:543043-543319:1:exon

position:543043:1
position: 543043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:543319:1
position: 543319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:546610-546885:1:exon

position:546610:1
position: 546610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546885:1
position: 546885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:547535-547768:1:exon

position:547535:1
position: 547535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:547768:1
position: 547768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:549013-549396:1:exon

position:549013:1
position: 549013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109805206
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805206
product: CSC1-like protein HYP1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_020367218.2
SIO_010081: LOC109805206
subclass of: SO_0000673
so part of: LOC109805206
location: join(527316..527453,530135..530284,533385..533448,533556..533765,534940..535125,535853..536151,543043..543319,546610..546885,547535..547768,549013..549396)
location: region:527316-549396:1
so has part: feature:527316-527453:1:exon
so has part: feature:530135-530284:1:exon
so has part: feature:533385-533448:1:exon
so has part: feature:533556-533765:1:exon
so has part: feature:534940-535125:1:exon
so has part: feature:535853-536151:1:exon
so has part: feature:543043-543319:1:exon
so has part: feature:546610-546885:1:exon
so has part: feature:547535-547768:1:exon
so has part: feature:549013-549396:1:exon

position:527316:1
position: 527316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527316-527453:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:530135-530284:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:533385-533448:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:533556-533765:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:534940-535125:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:535853-536151:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:543043-543319:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:546610-546885:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:547535-547768:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:549013-549396:1:exon

LOC109805206
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805206
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CSC1-like protein HYP1 isoform X1
translation: MILSALLTSVGINLGLCFLFFTLYSILRKQPGNITVYAPRLVAEGKVKEGGYFNLERLLPTAGWVRQAWEPSEDEFLSNSGLDAFVFMRIFIFSLKVFAVGGIIGMSVLLPINYMGSQLSDDSDFQHKSLDSFSISNVNNGSNRLWIHFSAAYIFTGIVCYLLYNEYWYLSSKRIAYFYSSKPQPHQFTLLVRGIPVPPGSTCHETVERFFLEYHPSTYLSHSVVRRSNKLQSLVNDAEKLYKRLTHLKQKNDAPKRHRRDGCLGLFGRKVDIDHYERRLGDIEDNVRTEQSSLEAKEVRAAFVSFKTRFGAAIALHIQESVNPTEWITEKAPEPHDVYWPFFTVSFIKRWISKLVVFVACTSLTVLFLIPVAIVQGLTNLDQLETWFPFLRGILRLSVVSQVITGYLPSLILQLFLSFVPPIMIMLSSMQGYISWSQIQKSACTKVLWFTIWNIFFANVLSGSALYRVRIFLEPKEIPRILGEAVPSQASFFISYVVTSGWTTIASELFQLTKLISNFISRIFGGNSDDDFEPPSIPYHSEIPRIRLFGLLGVTYFILAPLIIPFLLIYFCLGYIIFRNQLLKVYVAKYETGGQFWPTVHNSTIFSLILMHIIAIGIFGLKKLPLASILTLPLPILTLLFNEYCQKRFFPTFKDYPAECLIKKDRADENEHNMPEFYDKLANAYNDPALMPKKYSERSDSHRSPLLHSSE
SIO_010081: LOC109805206
subclass of: SO_0000673
so part of: LOC109805206
location: join(529232..529512,530135..530284,533385..533448,533556..533765,534940..535125,535853..536151,543043..543319,546610..546885,547535..547768,549013..549171)
location: region:529232-549171:1
so has part: feature:529232-529512:1:exon
so has part: feature:530135-530284:1:exon
so has part: feature:533385-533448:1:exon
so has part: feature:533556-533765:1:exon
so has part: feature:534940-535125:1:exon
so has part: feature:535853-536151:1:exon
so has part: feature:543043-543319:1:exon
so has part: feature:546610-546885:1:exon
so has part: feature:547535-547768:1:exon
so has part: feature:549013-549171:1:exon

XP_020222806.1
type: Protein
SIO_000068: ncbiprotein

position:529232:1
position: 529232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:549171:1
position: 549171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529232-529512:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:530135-530284:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:533385-533448:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:533556-533765:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:534940-535125:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:535853-536151:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:543043-543319:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:546610-546885:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:547535-547768:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:549013-549171:1:exon

LOC109805206
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805206
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CSC1-like protein HYP1 isoform X2
translation: MSVLLPINYMGSQLSDDSDFQHKSLDSFSISNVNNGSNRLWIHFSAAYIFTGIVCYLLYNEYWYLSSKRIAYFYSSKPQPHQFTLLVRGIPVPPGSTCHETVERFFLEYHPSTYLSHSVVRRSNKLQSLVNDAEKLYKRLTHLKQKNDAPKRHRRDGCLGLFGRKVDIDHYERRLGDIEDNVRTEQSSLEAKEVRAAFVSFKTRFGAAIALHIQESVNPTEWITEKAPEPHDVYWPFFTVSFIKRWISKLVVFVACTSLTVLFLIPVAIVQGLTNLDQLETWFPFLRGILRLSVVSQVITGYLPSLILQLFLSFVPPIMIMLSSMQGYISWSQIQKSACTKVLWFTIWNIFFANVLSGSALYRVRIFLEPKEIPRILGEAVPSQASFFISYVVTSGWTTIASELFQLTKLISNFISRIFGGNSDDDFEPPSIPYHSEIPRIRLFGLLGVTYFILAPLIIPFLLIYFCLGYIIFRNQLLKVYVAKYETGGQFWPTVHNSTIFSLILMHIIAIGIFGLKKLPLASILTLPLPILTLLFNEYCQKRFFPTFKDYPAECLIKKDRADENEHNMPEFYDKLANAYNDPALMPKKYSERSDSHRSPLLHSSE
SIO_010081: LOC109805206
subclass of: SO_0000673
so part of: LOC109805206
location: join(530169..530284,533385..533448,533556..533765,534940..535125,535853..536151,543043..543319,546610..546885,547535..547768,549013..549171)
location: region:530169-549171:1
so has part: feature:530169-530284:1:exon
so has part: feature:533385-533448:1:exon
so has part: feature:533556-533765:1:exon
so has part: feature:534940-535125:1:exon
so has part: feature:535853-536151:1:exon
so has part: feature:543043-543319:1:exon
so has part: feature:546610-546885:1:exon
so has part: feature:547535-547768:1:exon
so has part: feature:549013-549171:1:exon

XP_020222807.1
type: Protein
SIO_000068: ncbiprotein

position:530169:1
position: 530169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:530169-530284:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:533385-533448:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:533556-533765:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:534940-535125:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:535853-536151:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:543043-543319:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:546610-546885:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:547535-547768:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:549013-549171:1:exon

LOC109805207
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109805207
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 537748..540671
location: region:537748-540671:1
so has part: feature:537748-540671:1:exon
subclass of: SO_0000010

109805207
type: Gene
SIO_000068: ncbigene

position:537748:1
position: 537748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540671:1
position: 540671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:537748-540671:1:exon

LOC109805207
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805207
product: uncharacterized LOC109805207
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_020367219.2
SIO_010081: LOC109805207
subclass of: SO_0000673
so part of: LOC109805207
location: join(537748..539297,539616..540671)
location: region:537748-540671:1
so has part: feature:537748-539297:1:exon
so has part: feature:539616-540671:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:537748-539297:1:exon

position:539297:1
position: 539297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:539616-540671:1:exon

position:539616:1
position: 539616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109805207
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805207
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109805207
translation: MCKTDVTAHAEVVERGRIFKFLHGLNHEYDLIRVQILGREKLSSLSEVFFMVREEETRRAIMLDGGISNVGFAMTTRKGVHKGANARGKSFEKGNRGDYCSYYRRSGHTKETCFKLQGRNNVLECMGNNKESTQRWANHTTSKQEVTNQSSTSPPSDLNMKAYKEELECLKAMVESISKPSGSCTLSMKDLVMAKTILTAKEHSGLYLLESEDQSKTKIISQQTTFETWANSQIWLHHKRLGHPSFNLIKFLFPHLFTREFVESFNCDIC
SIO_010081: LOC109805207
subclass of: SO_0000673
so part of: LOC109805207
location: join(538730..539297,539616..539860)
location: region:538730-539860:1
so has part: feature:538730-539297:1:exon
so has part: feature:539616-539860:1:exon

XP_020222808.1
type: Protein
SIO_000068: ncbiprotein

position:538730:1
position: 538730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539860:1
position: 539860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:538730-539297:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:539616-539860:1:exon

LOC109804911
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804911
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 578298..579941
location: region:578298-579941:1
so has part: feature:578298-579941:1:exon
subclass of: SO_0000010

109804911
type: Gene
SIO_000068: ncbigene

position:578298:1
position: 578298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:579941:1
position: 579941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:578298-579941:1:exon

LOC109804911
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804911
product: ethylene-responsive transcription factor ERN2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020366828.2
SIO_010081: LOC109804911
subclass of: SO_0000673
so part of: LOC109804911
location: 578298..579941
location: region:578298-579941:1
so has part: feature:578298-579941:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:578298-579941:1:exon

LOC109804911
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804911
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ethylene-responsive transcription factor ERN2
translation: MARKRKATTSGEVVEERNLGEGTMAWDDMMKQAAALGGVQRARKRFVGVRQRPSGRWVAEIKDTIQKIRVWLGTFDTAEEAARAYDEAACLLRGANTRTNFWPCSQSSSSPALSSKITNLLLQRLKERNNNNNNTCFSSSLVNHPQMQQQVDYSYAYEAGSTQFSIDQFTDFLNDPEDYSTSNNDYINNSAQIDYITSSFESCLTEKDVETEMDVQYKSIDVTTPQTSSNDSNSGVEEEREEDSDTDLGGQSADSDVHDFRFLDNIAPPNYYSPFEMAEEMEEPVEPENYGGDEPSMLRAVMKRMTYERKFSASLYAFNGIPECLKLKLESGNMKKGRGLADQLTNLKMACSKNKVEKNNKEEKEYMETMDRKHEEHQQTSTDMDSSSVDGELLLWNSLDLPPICFVNLLENGSFN
SIO_010081: LOC109804911
subclass of: SO_0000673
so part of: LOC109804911
location: 578467..579717
location: region:578467-579717:1
so has part: feature:578467-579717:1:exon

XP_020222417.1
type: Protein
SIO_000068: ncbiprotein

position:578467:1
position: 578467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:579717:1
position: 579717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:578467-579717:1:exon

LOC109804804
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804804
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(581248..592346)
location: region:581248-592346:-1
so has part: feature:581248-592346:-1:exon
subclass of: SO_0000010

109804804
type: Gene
SIO_000068: ncbigene

position:581248:-1
position: 581248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592346:-1
position: 592346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:581248-592346:-1:exon

LOC109804804
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804804
product: SNF1-related protein kinase catalytic subunit alpha KIN10, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_020366665.2
SIO_010081: LOC109804804
subclass of: SO_0000673
so part of: LOC109804804
location: complement(join(581248..581881,582234..582470,583182..583322,584290..584373,584444..584533,585483..585668,586674..586805,586899..587081,587163..587347,587713..587914,592203..592346))
location: region:581248-592346:-1
so has part: feature:592203-592346:-1:exon
so has part: feature:587713-587914:-1:exon
so has part: feature:587163-587347:-1:exon
so has part: feature:586899-587081:-1:exon
so has part: feature:586674-586805:-1:exon
so has part: feature:585483-585668:-1:exon
so has part: feature:584444-584533:-1:exon
so has part: feature:584290-584373:-1:exon
so has part: feature:583182-583322:-1:exon
so has part: feature:582234-582470:-1:exon
so has part: feature:581248-581881:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:592203-592346:-1:exon

position:592203:-1
position: 592203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:587713-587914:-1:exon

position:587713:-1
position: 587713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:587914:-1
position: 587914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:587163-587347:-1:exon

position:587163:-1
position: 587163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:587347:-1
position: 587347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:586899-587081:-1:exon

position:586899:-1
position: 586899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:587081:-1
position: 587081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:586674-586805:-1:exon

position:586674:-1
position: 586674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586805:-1
position: 586805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:585483-585668:-1:exon

position:585483:-1
position: 585483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:585668:-1
position: 585668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:584444-584533:-1:exon

position:584444:-1
position: 584444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:584533:-1
position: 584533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:584290-584373:-1:exon

position:584290:-1
position: 584290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:584373:-1
position: 584373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:583182-583322:-1:exon

position:583182:-1
position: 583182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:583322:-1
position: 583322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:582234-582470:-1:exon

position:582234:-1
position: 582234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:582470:-1
position: 582470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:581248-581881:-1:exon

position:581881:-1
position: 581881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109804804
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804804
product: SNF1-related protein kinase catalytic subunit alpha KIN10, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_020366666.2
SIO_010081: LOC109804804
subclass of: SO_0000673
so part of: LOC109804804
location: complement(join(581248..581881,582234..582470,583182..583322,584290..584373,584444..584533,585483..585668,586674..586805,586899..587081,587163..587347,587713..587914,588132..588196,592203..592311))
location: region:581248-592311:-1
so has part: feature:592203-592311:-1:exon
so has part: feature:588132-588196:-1:exon
so has part: feature:587713-587914:-1:exon
so has part: feature:587163-587347:-1:exon
so has part: feature:586899-587081:-1:exon
so has part: feature:586674-586805:-1:exon
so has part: feature:585483-585668:-1:exon
so has part: feature:584444-584533:-1:exon
so has part: feature:584290-584373:-1:exon
so has part: feature:583182-583322:-1:exon
so has part: feature:582234-582470:-1:exon
so has part: feature:581248-581881:-1:exon

position:592311:-1
position: 592311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:592203-592311:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:588132-588196:-1:exon

position:588132:-1
position: 588132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588196:-1
position: 588196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:587713-587914:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:587163-587347:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:586899-587081:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:586674-586805:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:585483-585668:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:584444-584533:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:584290-584373:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:583182-583322:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:582234-582470:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:581248-581881:-1:exon

LOC109804804
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804804
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SNF1-related protein kinase catalytic subunit alpha KIN10
translation: MDRSTGRSGGGSVDMFLPNYKLGKTLGIGSFGKVKIAEHVLTGHKVAIKILNRHKIKNMEMEEKVRREIKILRLFMHHHIIRLYEVVETPTDIYVVMEYVKSGELFDYIVEKGRLQEDEARHFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKFNIKIADFGLSNIMRDGHFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLVVDPMKRMTIPEIRQHPWFQVRLPRYLAVPPPDTLQQAKKIDEEILQEVVNMGFDRNQLVESLRNRIQNEGTVTYYLLLDNRFRVSTGYLGAEFQETMDSGFNHMHSNEVASPIVGHHSTGYMDYQGVGMRQQFPVERKWALGLQSRAQPREIMTEVLKALQGLNVCWKKIGHYNMKCRWVASIPGHHEMVNYSLDCNRFFETDTRFIENEVVSKSSVVKFEVQLYKTREEKYLLDLQRVQGPQFLFLDLCAAFLSQLRVL
SIO_010081: LOC109804804
subclass of: SO_0000673
so part of: LOC109804804
location: complement(join(581768..581881,582234..582470,583182..583322,584290..584373,584444..584533,585483..585668,586674..586805,586899..587081,587163..587347,587713..587905))
location: region:581768-587905:-1
so has part: feature:587713-587905:-1:exon
so has part: feature:587163-587347:-1:exon
so has part: feature:586899-587081:-1:exon
so has part: feature:586674-586805:-1:exon
so has part: feature:585483-585668:-1:exon
so has part: feature:584444-584533:-1:exon
so has part: feature:584290-584373:-1:exon
so has part: feature:583182-583322:-1:exon
so has part: feature:582234-582470:-1:exon
so has part: feature:581768-581881:-1:exon

XP_020222254.1
type: Protein
SIO_000068: ncbiprotein

position:581768:-1
position: 581768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:587905:-1
position: 587905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:587713-587905:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:587163-587347:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:586899-587081:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:586674-586805:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:585483-585668:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:584444-584533:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:584290-584373:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:583182-583322:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:582234-582470:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:581768-581881:-1:exon

LOC109804804
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804804
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SNF1-related protein kinase catalytic subunit alpha KIN10
translation: MDRSTGRSGGGSVDMFLPNYKLGKTLGIGSFGKVKIAEHVLTGHKVAIKILNRHKIKNMEMEEKVRREIKILRLFMHHHIIRLYEVVETPTDIYVVMEYVKSGELFDYIVEKGRLQEDEARHFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKFNIKIADFGLSNIMRDGHFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLVVDPMKRMTIPEIRQHPWFQVRLPRYLAVPPPDTLQQAKKIDEEILQEVVNMGFDRNQLVESLRNRIQNEGTVTYYLLLDNRFRVSTGYLGAEFQETMDSGFNHMHSNEVASPIVGHHSTGYMDYQGVGMRQQFPVERKWALGLQSRAQPREIMTEVLKALQGLNVCWKKIGHYNMKCRWVASIPGHHEMVNYSLDCNRFFETDTRFIENEVVSKSSVVKFEVQLYKTREEKYLLDLQRVQGPQFLFLDLCAAFLSQLRVL
SIO_010081: LOC109804804
subclass of: SO_0000673
so part of: LOC109804804
location: complement(join(581768..581881,582234..582470,583182..583322,584290..584373,584444..584533,585483..585668,586674..586805,586899..587081,587163..587347,587713..587905))
location: region:581768-587905:-1
so has part: feature:587713-587905:-1:exon
so has part: feature:587163-587347:-1:exon
so has part: feature:586899-587081:-1:exon
so has part: feature:586674-586805:-1:exon
so has part: feature:585483-585668:-1:exon
so has part: feature:584444-584533:-1:exon
so has part: feature:584290-584373:-1:exon
so has part: feature:583182-583322:-1:exon
so has part: feature:582234-582470:-1:exon
so has part: feature:581768-581881:-1:exon

XP_020222255.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:587713-587905:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:587163-587347:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:586899-587081:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:586674-586805:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:585483-585668:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:584444-584533:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:584290-584373:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:583182-583322:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:582234-582470:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:581768-581881:-1:exon

LOC109805052
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109805052
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(597367..604087)
location: region:597367-604087:-1
so has part: feature:597367-604087:-1:exon
subclass of: SO_0000010

109805052
type: Gene
SIO_000068: ncbigene

position:597367:-1
position: 597367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604087:-1
position: 604087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:597367-604087:-1:exon

LOC109805052
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805052
product: protein IMPAIRED IN BABA-INDUCED STERILITY 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_020366998.2
SIO_010081: LOC109805052
subclass of: SO_0000673
so part of: LOC109805052
location: complement(join(597367..597767,597945..598014,598487..598825,598906..599017,599708..599805,600088..600315,600592..600909,601546..601830,603223..604087))
location: region:597367-604087:-1
so has part: feature:603223-604087:-1:exon
so has part: feature:601546-601830:-1:exon
so has part: feature:600592-600909:-1:exon
so has part: feature:600088-600315:-1:exon
so has part: feature:599708-599805:-1:exon
so has part: feature:598906-599017:-1:exon
so has part: feature:598487-598825:-1:exon
so has part: feature:597945-598014:-1:exon
so has part: feature:597367-597767:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:603223-604087:-1:exon

position:603223:-1
position: 603223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:601546-601830:-1:exon

position:601546:-1
position: 601546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:601830:-1
position: 601830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:600592-600909:-1:exon

position:600592:-1
position: 600592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:600909:-1
position: 600909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:600088-600315:-1:exon

position:600088:-1
position: 600088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:600315:-1
position: 600315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:599708-599805:-1:exon

position:599708:-1
position: 599708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:599805:-1
position: 599805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:598906-599017:-1:exon

position:598906:-1
position: 598906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:599017:-1
position: 599017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:598487-598825:-1:exon

position:598487:-1
position: 598487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598825:-1
position: 598825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:597945-598014:-1:exon

position:597945:-1
position: 597945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598014:-1
position: 598014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:597367-597767:-1:exon

position:597767:-1
position: 597767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109805052
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805052
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein IMPAIRED IN BABA-INDUCED STERILITY 1
translation: MGCINSKNVVARAYSPSPGEMVISEVVPASSKGHSAWLGPESKRGSEDKFKKHASRKSNGSSFGFRLGLAQRYAEAEQNAAGWPPWLTGVAAEAIQGWIPLKADSFQKLEKIGQGTYSSVFRAREVETGKMFALKKVRFDNLQPESIRFMAREITILRRLDHPNIMKLEGIITSRMSTSIYLVFEYMEHDLAGLVSRPDIVFSESQIKCYMRQLLSGLEHCHMRGIMHRDIKVSNILLNNEGVLKIGDFGLANTISTNNKHHLTSRVVTLWYRPPELLMGSTNYGVSVDLWSVGCVFAELFLGKPILKGRTEVEQLHKIFKLCGSPPEEFWKKNKLPHSTMFKPQTNYESSLRERCADFPVIAVDLLETLLSIDPSNRGTASSALMSEYFNVKPYACSPSSLPKYPPSKEMDVKCQEDSSRKKSGGKIREVATSRRQQRRVPKVLQDPNNFGKSISKENIPQNARRDDGNAHLTKGKGGAMHTKPTMDAMSETSQIMNLANGNGYSVPVHPGSTNDFTWAKRRKQDASSTLSDGSRSKISALDPHFAKGTYDLTNQRVTMDFDPAELINAQANRDEQWNENGIRRAARKSRFGRDK
SIO_010081: LOC109805052
subclass of: SO_0000673
so part of: LOC109805052
location: complement(join(597760..597767,597945..598014,598487..598825,598906..599017,599708..599805,600088..600315,600592..600909,601546..601830,603223..603555))
location: region:597760-603555:-1
so has part: feature:603223-603555:-1:exon
so has part: feature:601546-601830:-1:exon
so has part: feature:600592-600909:-1:exon
so has part: feature:600088-600315:-1:exon
so has part: feature:599708-599805:-1:exon
so has part: feature:598906-599017:-1:exon
so has part: feature:598487-598825:-1:exon
so has part: feature:597945-598014:-1:exon
so has part: feature:597760-597767:-1:exon

XP_020222587.1
type: Protein
SIO_000068: ncbiprotein

position:597760:-1
position: 597760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:603555:-1
position: 603555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:603223-603555:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:601546-601830:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:600592-600909:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:600088-600315:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:599708-599805:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:598906-599017:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:598487-598825:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:597945-598014:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:597760-597767:-1:exon

LOC109804733
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804733
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(608671..616186)
location: region:608671-616186:-1
so has part: feature:608671-616186:-1:exon
subclass of: SO_0000010

109804733
type: Gene
SIO_000068: ncbigene

position:608671:-1
position: 608671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616186:-1
position: 616186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:608671-616186:-1:exon

LOC109804733
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804733
product: purple acid phosphatase 23, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_020366567.2
SIO_010081: LOC109804733
subclass of: SO_0000673
so part of: LOC109804733
location: complement(join(608671..608906,609903..609977,610809..610931,611686..611967,613066..613256,613362..613579,614210..614546,615189..615380,615769..616186))
location: region:608671-616186:-1
so has part: feature:615769-616186:-1:exon
so has part: feature:615189-615380:-1:exon
so has part: feature:614210-614546:-1:exon
so has part: feature:613362-613579:-1:exon
so has part: feature:613066-613256:-1:exon
so has part: feature:611686-611967:-1:exon
so has part: feature:610809-610931:-1:exon
so has part: feature:609903-609977:-1:exon
so has part: feature:608671-608906:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:615769-616186:-1:exon

position:615769:-1
position: 615769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:615189-615380:-1:exon

position:615189:-1
position: 615189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615380:-1
position: 615380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:614210-614546:-1:exon

position:614210:-1
position: 614210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614546:-1
position: 614546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:613362-613579:-1:exon

position:613362:-1
position: 613362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:613579:-1
position: 613579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:613066-613256:-1:exon

position:613066:-1
position: 613066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:613256:-1
position: 613256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:611686-611967:-1:exon

position:611686:-1
position: 611686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:611967:-1
position: 611967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:610809-610931:-1:exon

position:610809:-1
position: 610809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:610931:-1
position: 610931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:609903-609977:-1:exon

position:609903:-1
position: 609903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609977:-1
position: 609977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:608671-608906:-1:exon

position:608906:-1
position: 608906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109804733
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804733
product: purple acid phosphatase 23, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_020366566.2
SIO_010081: LOC109804733
subclass of: SO_0000673
so part of: LOC109804733
location: complement(join(608671..608906,609747..609809,609903..609977,610809..610931,611686..611967,613066..613256,613362..613579,614210..614546,615189..615380,615769..616186))
location: region:608671-616186:-1
so has part: feature:615769-616186:-1:exon
so has part: feature:615189-615380:-1:exon
so has part: feature:614210-614546:-1:exon
so has part: feature:613362-613579:-1:exon
so has part: feature:613066-613256:-1:exon
so has part: feature:611686-611967:-1:exon
so has part: feature:610809-610931:-1:exon
so has part: feature:609903-609977:-1:exon
so has part: feature:609747-609809:-1:exon
so has part: feature:608671-608906:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:615769-616186:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:615189-615380:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:614210-614546:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:613362-613579:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:613066-613256:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:611686-611967:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:610809-610931:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:609903-609977:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:609747-609809:-1:exon

position:609747:-1
position: 609747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609809:-1
position: 609809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:608671-608906:-1:exon

LOC109804733
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804733
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: purple acid phosphatase 23 isoform X2
translation: MKTFTFGMSLAMVLVMMSNIIIIMAVTESHIPTTLDGPFDPVTRRFDPSLRRGSDDLPMTHPRLRKNVTLNFPEQIALAISSPTSMWVSWVTGDAQIGLNVTPVDPASVGSEVWYGKESGKYTGVGKGDSVVYSQLYPFEGLWNYTSGIIHHVKLEGLEPGTRYYYKCGDSSIPAMSQEHFFETFPKPSPNNYPARIAVIGDLGLTSNSTSTIDHLTYNDPSMILMVGDLTYANQYLTTGGKGASCFSCAFPDAPIRETYQPRWDGWGRFMEPLTSEVPMMVIEGNHEIEPQAGGITFKSYLTRFAVPAEESGSKSNFYYSFDAGGIHFIMLGAYVDYNSTGAQFAWLKQDLKSIDRSVTPWLVAAWHSPWYNSYASHYQEFECMRLEMEELLYRYRVDIVFNGHVHAYERMNRVYNYTLDPCGPVYIIVGDGGNIEKVDVDHADDPGQCPSAGDNVPEFGGVCHLNFTSGPAKGNFCWNKQPEWSAFRESSFGHGILEVVNSTYALWTWHRNQDNYKENAVGDQIYIVRQPELCMKELKSQDPHQSLPYNSSTKSSSATSHLSQVEWS
SIO_010081: LOC109804733
subclass of: SO_0000673
so part of: LOC109804733
location: complement(join(608892..608906,609903..609977,610809..610931,611686..611967,613066..613256,613362..613579,614210..614546,615189..615380,615769..616045))
location: region:608892-616045:-1
so has part: feature:615769-616045:-1:exon
so has part: feature:615189-615380:-1:exon
so has part: feature:614210-614546:-1:exon
so has part: feature:613362-613579:-1:exon
so has part: feature:613066-613256:-1:exon
so has part: feature:611686-611967:-1:exon
so has part: feature:610809-610931:-1:exon
so has part: feature:609903-609977:-1:exon
so has part: feature:608892-608906:-1:exon

XP_020222156.1
type: Protein
SIO_000068: ncbiprotein

position:608892:-1
position: 608892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616045:-1
position: 616045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:615769-616045:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:615189-615380:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:614210-614546:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:613362-613579:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:613066-613256:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:611686-611967:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:610809-610931:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:609903-609977:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:608892-608906:-1:exon

LOC109804733
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804733
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: purple acid phosphatase 23 isoform X1
translation: MKTFTFGMSLAMVLVMMSNIIIIMAVTESHIPTTLDGPFDPVTRRFDPSLRRGSDDLPMTHPRLRKNVTLNFPEQIALAISSPTSMWVSWVTGDAQIGLNVTPVDPASVGSEVWYGKESGKYTGVGKGDSVVYSQLYPFEGLWNYTSGIIHHVKLEGLEPGTRYYYKCGDSSIPAMSQEHFFETFPKPSPNNYPARIAVIGDLGLTSNSTSTIDHLTYNDPSMILMVGDLTYANQYLTTGGKGASCFSCAFPDAPIRETYQPRWDGWGRFMEPLTSEVPMMVIEGNHEIEPQAGGITFKSYLTRFAVPAEESGSKSNFYYSFDAGGIHFIMLGAYVDYNSTGAQFAWLKQDLKSIDRSVTPWLVAAWHSPWYNSYASHYQEFECMRLEMEELLYRYRVDIVFNGHVHAYERMNRVYNYTLDPCGPVYIIVGDGGNIEKVDVDHADDPGQCPSAGDNVPEFGGVCHLNFTSGPAKGNFCWNKQPEWSAFRESSFGHGILEVVNSTYALWTWHRNQDNYKENAVGDQIYIVRQPELCMKELKSQDPHQSLPYNSSTKSSSATSHLSQDVSIVISQFLGVFFIYGIYSQVEWS
SIO_010081: LOC109804733
subclass of: SO_0000673
so part of: LOC109804733
location: complement(join(608892..608906,609747..609809,609903..609977,610809..610931,611686..611967,613066..613256,613362..613579,614210..614546,615189..615380,615769..616045))
location: region:608892-616045:-1
so has part: feature:615769-616045:-1:exon
so has part: feature:615189-615380:-1:exon
so has part: feature:614210-614546:-1:exon
so has part: feature:613362-613579:-1:exon
so has part: feature:613066-613256:-1:exon
so has part: feature:611686-611967:-1:exon
so has part: feature:610809-610931:-1:exon
so has part: feature:609903-609977:-1:exon
so has part: feature:609747-609809:-1:exon
so has part: feature:608892-608906:-1:exon

XP_020222155.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:615769-616045:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:615189-615380:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:614210-614546:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:613362-613579:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:613066-613256:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:611686-611967:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:610809-610931:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:609903-609977:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:609747-609809:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:608892-608906:-1:exon

LOC109805088
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109805088
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(618910..623805)
location: region:618910-623805:-1
so has part: feature:618910-623805:-1:exon
subclass of: SO_0000010

109805088
type: Gene
SIO_000068: ncbigene

position:618910:-1
position: 618910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623805:-1
position: 623805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:618910-623805:-1:exon

LOC109805088
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805088
product: uncharacterized LOC109805088
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_020367043.2
SIO_010081: LOC109805088
subclass of: SO_0000673
so part of: LOC109805088
location: complement(join(618910..619304,619937..620080,620281..620461,621908..622026,622157..622274,622843..622937,623530..623805))
location: region:618910-623805:-1
so has part: feature:623530-623805:-1:exon
so has part: feature:622843-622937:-1:exon
so has part: feature:622157-622274:-1:exon
so has part: feature:621908-622026:-1:exon
so has part: feature:620281-620461:-1:exon
so has part: feature:619937-620080:-1:exon
so has part: feature:618910-619304:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:623530-623805:-1:exon

position:623530:-1
position: 623530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:622843-622937:-1:exon

position:622843:-1
position: 622843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:622937:-1
position: 622937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:622157-622274:-1:exon

position:622157:-1
position: 622157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:622274:-1
position: 622274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:621908-622026:-1:exon

position:621908:-1
position: 621908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:622026:-1
position: 622026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:620281-620461:-1:exon

position:620281:-1
position: 620281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:620461:-1
position: 620461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:619937-620080:-1:exon

position:619937:-1
position: 619937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:620080:-1
position: 620080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:618910-619304:-1:exon

position:619304:-1
position: 619304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109805088
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805088
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109805088
translation: MASIQCSSLWLPSLPNNTNTIRFLSVNPNSVPFSSSLTRLRASSSSSQTLEEAAMSIDNLRRFINLNSGKWNGSFYQFDSCGNMLQQLNTKLSASSYGEDELMSLIQTLYIKQPSSSTAVNRDENDAEWAEYKIKETNMFTVDKYQQIGFFPSERAFALRYQTAGMLETVLRQGVLGEDDTGEESPRNLKLPSRRPSVVCENCLYSLQRDMRARAFHILEPKGTVDMLIIFLEERSDGTPPLLDSSRDAKSRIIPFLGKWKGHSITKRSGVYGSTIANADTVVLHEMDDNGQLIQDVTSTSEGENVTTNVHWTGTVSDYLVTFDGGYQMILLPSGMYMGCPCDVAKSVAESKSFHLEFCWLETPDKRQRLVRTYDVQGLAVSSTYFFETKL
SIO_010081: LOC109805088
subclass of: SO_0000673
so part of: LOC109805088
location: complement(join(619014..619304,619937..620080,620281..620461,621908..622026,622157..622274,622843..622937,623530..623757))
location: region:619014-623757:-1
so has part: feature:623530-623757:-1:exon
so has part: feature:622843-622937:-1:exon
so has part: feature:622157-622274:-1:exon
so has part: feature:621908-622026:-1:exon
so has part: feature:620281-620461:-1:exon
so has part: feature:619937-620080:-1:exon
so has part: feature:619014-619304:-1:exon

XP_020222632.1
type: Protein
SIO_000068: ncbiprotein

position:619014:-1
position: 619014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623757:-1
position: 623757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623530-623757:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622843-622937:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622157-622274:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:621908-622026:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:620281-620461:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:619937-620080:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:619014-619304:-1:exon

LOC109805180
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109805180
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(626463..629479)
location: region:626463-629479:-1
so has part: feature:626463-629479:-1:exon
subclass of: SO_0000010

109805180
type: Gene
SIO_000068: ncbigene

position:626463:-1
position: 626463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:629479:-1
position: 629479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:626463-629479:-1:exon

LOC109805180
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805180
product: lamin-like protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_020367181.2
SIO_010081: LOC109805180
subclass of: SO_0000673
so part of: LOC109805180
location: complement(join(626463..626931,628902..629479))
location: region:626463-629479:-1
so has part: feature:628902-629479:-1:exon
so has part: feature:626463-626931:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:628902-629479:-1:exon

position:628902:-1
position: 628902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:626463-626931:-1:exon

position:626931:-1
position: 626931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109805180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805180
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lamin-like protein
translation: MEKWSVSTTTLAASTAVMGWLLLVVMGGPVLHKVGGSRGWIDHDVNYTEWSSQQHVYVGDWLLFMFDKRYFNVLEVNKTSYEKCEERDFMKNVTRGGRDVVQLTEAKTYYFLSAGGYCFHGMKVAVNVQQHQQPAEPSPAPAPAPSSAAVSPAFWPSIVTGVWIMVAHVKLVLMG
SIO_010081: LOC109805180
subclass of: SO_0000673
so part of: LOC109805180
location: complement(join(626591..626931,628902..629088))
location: region:626591-629088:-1
so has part: feature:628902-629088:-1:exon
so has part: feature:626591-626931:-1:exon

XP_020222770.1
type: Protein
SIO_000068: ncbiprotein

position:626591:-1
position: 626591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:629088:-1
position: 629088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:628902-629088:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:626591-626931:-1:exon

LOC109804792
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804792
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 663257..664297
location: region:663257-664297:1
so has part: feature:663257-664297:1:exon
subclass of: SO_0000010

109804792
type: Gene
SIO_000068: ncbigene

position:663257:1
position: 663257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:664297:1
position: 664297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:663257-664297:1:exon

LOC109804792
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804792
product: ethylene-responsive transcription factor LEP
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020366649.2
SIO_010081: LOC109804792
subclass of: SO_0000673
so part of: LOC109804792
location: 663257..664297
location: region:663257-664297:1
so has part: feature:663257-664297:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:663257-664297:1:exon

LOC109804792
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804792
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ethylene-responsive transcription factor LEP
translation: MNPYTSSPSSSKSKKKQTTTQQDQQQHETAWGGRYLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAALAYDRAARSMRGSRARTNFVYPDTPPGSSVTSIISPDEQTQTQIQIQIHQAQEELSSLFAPNPFPQPDPTPPFSLGGYPGITNANTPTFSATEVASSGGYSYSYGYNEGVTNVDGSHFKLFDDGETQLPPLPPDITSSMGYEMGHGFYGDGVGFSDPSFNVDASGPGYPYSGFESGDYVVHSPLFGAMPPVSDNVATGHEGFDLGSSSYFF
SIO_010081: LOC109804792
subclass of: SO_0000673
so part of: LOC109804792
location: 663414..664262
location: region:663414-664262:1
so has part: feature:663414-664262:1:exon

XP_020222238.1
type: Protein
SIO_000068: ncbiprotein

position:663414:1
position: 663414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:664262:1
position: 664262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:663414-664262:1:exon

LOC109804634
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804634
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 717420..722417
location: region:717420-722417:1
so has part: feature:717420-722417:1:exon
subclass of: SO_0000010

109804634
type: Gene
SIO_000068: ncbigene

position:717420:1
position: 717420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:722417:1
position: 722417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:717420-722417:1:exon

LOC109804634
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804634
product: uncharacterized LOC109804634
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_020366467.2
SIO_010081: LOC109804634
subclass of: SO_0000673
so part of: LOC109804634
location: join(717420..717674,718745..718865,719009..719109,719489..719614,719710..719830,719960..720044,720651..720764,720852..720891,722011..722417)
location: region:717420-722417:1
so has part: feature:717420-717674:1:exon
so has part: feature:718745-718865:1:exon
so has part: feature:719009-719109:1:exon
so has part: feature:719489-719614:1:exon
so has part: feature:719710-719830:1:exon
so has part: feature:719960-720044:1:exon
so has part: feature:720651-720764:1:exon
so has part: feature:720852-720891:1:exon
so has part: feature:722011-722417:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:717420-717674:1:exon

position:717674:1
position: 717674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:718745-718865:1:exon

position:718745:1
position: 718745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:718865:1
position: 718865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:719009-719109:1:exon

position:719009:1
position: 719009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:719109:1
position: 719109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:719489-719614:1:exon

position:719489:1
position: 719489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:719614:1
position: 719614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:719710-719830:1:exon

position:719710:1
position: 719710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:719830:1
position: 719830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:719960-720044:1:exon

position:719960:1
position: 719960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:720044:1
position: 720044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:720651-720764:1:exon

position:720651:1
position: 720651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:720764:1
position: 720764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:720852-720891:1:exon

position:720852:1
position: 720852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:720891:1
position: 720891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:722011-722417:1:exon

position:722011:1
position: 722011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109804634
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804634
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109804634
translation: MGEEREDPQKLKRIAANSYDYDNDSRWPDYWNNVLIPPHLSSRNDVVSHYKHKFYQRYIDPDLVVEPISVGGSSSQPARSSATSSSPPSTNNQTRARSSGTTNRTSGTSTTAGPNPTPLRWDRQTVLFSVNAWVFVVAFLAAIPLVPPHLSHRAYRLSFMGTTCSSLYSLYSQYGKPRAWNLQALQVYFQSLIASKDFIYFIYCLTFVTSHLCLKFALIPILCWSFEHVAKFLRRNFSRSTLYRKYLEEPCVWVESNNTTLNILTSHAEIGLGFLLIISLFSWQRNIIQAFMYWQLLKLMYHVPVTAAYHQSVWAQIGGMVNPLVQRHAPFLKTPISAIQRWWLR
SIO_010081: LOC109804634
subclass of: SO_0000673
so part of: LOC109804634
location: join(717498..717674,718745..718865,719009..719109,719489..719614,719710..719830,719960..720044,720651..720764,720852..720891,722011..722163)
location: region:717498-722163:1
so has part: feature:717498-717674:1:exon
so has part: feature:718745-718865:1:exon
so has part: feature:719009-719109:1:exon
so has part: feature:719489-719614:1:exon
so has part: feature:719710-719830:1:exon
so has part: feature:719960-720044:1:exon
so has part: feature:720651-720764:1:exon
so has part: feature:720852-720891:1:exon
so has part: feature:722011-722163:1:exon

XP_020222056.1
type: Protein
SIO_000068: ncbiprotein

position:717498:1
position: 717498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:722163:1
position: 722163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:717498-717674:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:718745-718865:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:719009-719109:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:719489-719614:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:719710-719830:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:719960-720044:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:720651-720764:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:720852-720891:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:722011-722163:1:exon

LOC109804916
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804916
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 752528..759757
location: region:752528-759757:1
so has part: feature:752528-759757:1:exon

109804916
type: Gene
SIO_000068: ncbigene

position:752528:1
position: 752528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:759757:1
position: 759757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:752528-759757:1:exon

LOC109804916
type: Exon
subclass of: SO_0000147
RO_0002162: 3821
gene: LOC109804916
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109804916
subclass of: SO_0000673
so part of: LOC109804916
location: 752528..752968
location: region:752528-752968:1
so has part: feature:752528-752968:1:exon

position:752968:1
position: 752968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:752528-752968:1:exon

LOC109804916
type: Exon
subclass of: SO_0000147
RO_0002162: 3821
gene: LOC109804916
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109804916
subclass of: SO_0000673
so part of: LOC109804916
location: 753057..753733
location: region:753057-753733:1
so has part: feature:753057-753733:1:exon

position:753057:1
position: 753057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:753733:1
position: 753733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:753057-753733:1:exon

LOC109804916
type: Exon
subclass of: SO_0000147
RO_0002162: 3821
gene: LOC109804916
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109804916
subclass of: SO_0000673
so part of: LOC109804916
location: 754061..754191
location: region:754061-754191:1
so has part: feature:754061-754191:1:exon

position:754061:1
position: 754061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:754191:1
position: 754191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:754061-754191:1:exon

LOC109804916
type: Exon
subclass of: SO_0000147
RO_0002162: 3821
gene: LOC109804916
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109804916
subclass of: SO_0000673
so part of: LOC109804916
location: 754354..754486
location: region:754354-754486:1
so has part: feature:754354-754486:1:exon

position:754354:1
position: 754354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:754486:1
position: 754486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:754354-754486:1:exon

LOC109804916
type: Exon
subclass of: SO_0000147
RO_0002162: 3821
gene: LOC109804916
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109804916
subclass of: SO_0000673
so part of: LOC109804916
location: 754658..755928
location: region:754658-755928:1
so has part: feature:754658-755928:1:exon

position:754658:1
position: 754658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:755928:1
position: 755928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:754658-755928:1:exon

LOC109804916
type: Exon
subclass of: SO_0000147
RO_0002162: 3821
gene: LOC109804916
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109804916
subclass of: SO_0000673
so part of: LOC109804916
location: 756385..759757
location: region:756385-759757:1
so has part: feature:756385-759757:1:exon

position:756385:1
position: 756385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:756385-759757:1:exon

LOC109804917
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804917
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 782243..793077
location: region:782243-793077:1
so has part: feature:782243-793077:1:exon
subclass of: SO_0000010

109804917
type: Gene
SIO_000068: ncbigene

position:782243:1
position: 782243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:793077:1
position: 793077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:782243-793077:1:exon

LOC109804917
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 3821
gene: LOC109804917
product: isoprenylcysteine alpha-carbonyl methylesterase ICME, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XR_003804700.1
SIO_010081: LOC109804917
so part of: LOC109804917
location: join(782243..782503,784196..784272,784591..784660,784734..784814,785323..785397,785836..785937,786038..786178,787704..787769,787846..787989,788813..788903,789748..789983,791934..793077)
location: region:782243-793077:1
so has part: feature:782243-782503:1:exon
so has part: feature:784196-784272:1:exon
so has part: feature:784591-784660:1:exon
so has part: feature:784734-784814:1:exon
so has part: feature:785323-785397:1:exon
so has part: feature:785836-785937:1:exon
so has part: feature:786038-786178:1:exon
so has part: feature:787704-787769:1:exon
so has part: feature:787846-787989:1:exon
so has part: feature:788813-788903:1:exon
so has part: feature:789748-789983:1:exon
so has part: feature:791934-793077:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:782243-782503:1:exon

position:782503:1
position: 782503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:784196-784272:1:exon

position:784196:1
position: 784196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:784272:1
position: 784272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:784591-784660:1:exon

position:784591:1
position: 784591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:784660:1
position: 784660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:784734-784814:1:exon

position:784734:1
position: 784734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:784814:1
position: 784814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:785323-785397:1:exon

position:785323:1
position: 785323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:785397:1
position: 785397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:785836-785937:1:exon

position:785836:1
position: 785836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:785937:1
position: 785937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:786038-786178:1:exon

position:786038:1
position: 786038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:786178:1
position: 786178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:787704-787769:1:exon

position:787704:1
position: 787704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:787769:1
position: 787769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:787846-787989:1:exon

position:787846:1
position: 787846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:787989:1
position: 787989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:788813-788903:1:exon

position:788813:1
position: 788813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:788903:1
position: 788903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:789748-789983:1:exon

position:789748:1
position: 789748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:789983:1
position: 789983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:791934-793077:1:exon

position:791934:1
position: 791934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109804917
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804917
product: isoprenylcysteine alpha-carbonyl methylesterase ICME, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_020366838.2
SIO_010081: LOC109804917
subclass of: SO_0000673
so part of: LOC109804917
location: join(782243..782503,784196..784272,784591..784660,784734..784814,785323..785397,785836..785937,786038..786178,787704..787769,787846..787989,788813..788903,789748..790132)
location: region:782243-790132:1
so has part: feature:782243-782503:1:exon
so has part: feature:784196-784272:1:exon
so has part: feature:784591-784660:1:exon
so has part: feature:784734-784814:1:exon
so has part: feature:785323-785397:1:exon
so has part: feature:785836-785937:1:exon
so has part: feature:786038-786178:1:exon
so has part: feature:787704-787769:1:exon
so has part: feature:787846-787989:1:exon
so has part: feature:788813-788903:1:exon
so has part: feature:789748-790132:1:exon

position:790132:1
position: 790132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:782243-782503:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:784196-784272:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:784591-784660:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:784734-784814:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:785323-785397:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:785836-785937:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:786038-786178:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:787704-787769:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:787846-787989:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:788813-788903:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:789748-790132:1:exon

LOC109804917
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804917
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: isoprenylcysteine alpha-carbonyl methylesterase ICME
translation: MAVLSDRRRETHRRSAGKNAVRHRVARQESLRRGIGHVASETYLITRLAFTLLRYLGIGYRWITQLLALGCYALLLTPGFLQVAYYYFLSNKVKRSIVYGEQPRNRLDLYLPADVSEPKPVLIFVTGGAWIIGYKAWGSLLGLQLAERGIIVACIDYRNFPQGTISDMVNDTSQGISFVISNIANYGGDPNRIYLMGQSAGAHISSCALLEQATRESGKVDSVSWSISQIKAYFGLSGGYNLLDLVDHFHNRGLYRSIFLSIMEGEQSLKKFSPEIKIQDPCLKCSIPDFPPVYLFHGTADYSIPSVASEQFGDALKRAGAKAEVILYEGKTHTDLFLQDPLRGGKDDLFDHVVAIVHSNDSDALAKDATAPPRRRFVPEILLKLARKISPF
SIO_010081: LOC109804917
subclass of: SO_0000673
so part of: LOC109804917
location: join(782334..782503,784196..784272,784591..784660,784734..784814,785323..785397,785836..785937,786038..786178,787704..787769,787846..787989,788813..788903,789748..789909)
location: region:782334-789909:1
so has part: feature:782334-782503:1:exon
so has part: feature:784196-784272:1:exon
so has part: feature:784591-784660:1:exon
so has part: feature:784734-784814:1:exon
so has part: feature:785323-785397:1:exon
so has part: feature:785836-785937:1:exon
so has part: feature:786038-786178:1:exon
so has part: feature:787704-787769:1:exon
so has part: feature:787846-787989:1:exon
so has part: feature:788813-788903:1:exon
so has part: feature:789748-789909:1:exon

XP_020222427.1
type: Protein
SIO_000068: ncbiprotein

position:782334:1
position: 782334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:789909:1
position: 789909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:782334-782503:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:784196-784272:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:784591-784660:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:784734-784814:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:785323-785397:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:785836-785937:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:786038-786178:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:787704-787769:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:787846-787989:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:788813-788903:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:789748-789909:1:exon

LOC109804913
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804913
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(792001..797297)
location: region:792001-797297:-1
so has part: feature:792001-797297:-1:exon
subclass of: SO_0000010

109804913
type: Gene
SIO_000068: ncbigene

position:792001:-1
position: 792001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:797297:-1
position: 797297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:792001-797297:-1:exon

LOC109804913
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804913
product: protein GAMETE EXPRESSED 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 79% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_029272698.1
SIO_010081: LOC109804913
subclass of: SO_0000673
so part of: LOC109804913
location: complement(join(792001..792396,792512..792654,792730..792789,793457..793489,793774..793860,793960..794244,794821..795067,795985..796305,796946..797297))
location: region:792001-797297:-1
so has part: feature:796946-797297:-1:exon
so has part: feature:795985-796305:-1:exon
so has part: feature:794821-795067:-1:exon
so has part: feature:793960-794244:-1:exon
so has part: feature:793774-793860:-1:exon
so has part: feature:793457-793489:-1:exon
so has part: feature:792730-792789:-1:exon
so has part: feature:792512-792654:-1:exon
so has part: feature:792001-792396:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:796946-797297:-1:exon

position:796946:-1
position: 796946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:795985-796305:-1:exon

position:795985:-1
position: 795985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:796305:-1
position: 796305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:794821-795067:-1:exon

position:794821:-1
position: 794821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:795067:-1
position: 795067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:793960-794244:-1:exon

position:793960:-1
position: 793960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:794244:-1
position: 794244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:793774-793860:-1:exon

position:793774:-1
position: 793774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:793860:-1
position: 793860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:793457-793489:-1:exon

position:793457:-1
position: 793457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:793489:-1
position: 793489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:792730-792789:-1:exon

position:792730:-1
position: 792730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:792789:-1
position: 792789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:792512-792654:-1:exon

position:792512:-1
position: 792512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:792654:-1
position: 792654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:792001-792396:-1:exon

position:792396:-1
position: 792396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109804913
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804913
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein GAMETE EXPRESSED 3
translation: MFLQCAMTHLLVVLLVAMFSFSSSVSAYHWFSKPLVGDDGRVYVCSGNNFFAFENNGTIAWTMHLDYKCNLGTAPLHGGHGKVYLVADNRILVIKYGSMEPEAEVFFGPGPGKPAEAEIIGLSVSTLGSNVYINVKNRGLFAYQRHGRLLWSVGPVLYQFGYRQGCKKNLTDCYFASVPVLDQCEASIYISNTEGELYCLSVRSRYFRWIQDFSSFDKNFTITAGNNGHLYVTVPAKALVLALDVFSGNVLWQRSIGPLSKFDSAPVVDSNGWISIGSLDGFLYSFSPTGVLKKFSRMNAENSMVQVGPFLDCSGFAIYISQIEMEGKVSHAIGEYTVVSAIRSKAALFTMMVPATGSIYWSESYPGKHSTLFSESDLSHYVMNEEILLAFLAASKIGTPLQCRTIGQKLASSCSQERTKLVSIYTGNERAIVLFLLFESALLLVLIGLLRFCCTFWAKEKLKDQGLGSFLGKRCSLRLKKKALDRTITELEKKAAEDNEVFEKLGDIVRERECIERKLSTTYSLGRDRTDSQPKSMLPVHMGKTKSFSFQDAKQKNMTVLHTLSDTSSSESSTEGETNMLDIEGMDSSTKAKAKTLIVDTSSTE
SIO_010081: LOC109804913
subclass of: SO_0000673
so part of: LOC109804913
location: complement(join(792001..792396,792512..792654,792730..792789,793457..793489,793774..793860,793960..794244,794821..795067,795985..796305,796946..797191))
location: region:792001-797191:-1
so has part: feature:796946-797191:-1:exon
so has part: feature:795985-796305:-1:exon
so has part: feature:794821-795067:-1:exon
so has part: feature:793960-794244:-1:exon
so has part: feature:793774-793860:-1:exon
so has part: feature:793457-793489:-1:exon
so has part: feature:792730-792789:-1:exon
so has part: feature:792512-792654:-1:exon
so has part: feature:792001-792396:-1:exon

XP_029128531.1
type: Protein
SIO_000068: ncbiprotein

position:797191:-1
position: 797191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:796946-797191:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:795985-796305:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:794821-795067:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:793960-794244:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:793774-793860:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:793457-793489:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:792730-792789:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:792512-792654:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:792001-792396:-1:exon

LOC109804879
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804879
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(800803..808694)
location: region:800803-808694:-1
so has part: feature:800803-808694:-1:exon
subclass of: SO_0000010

109804879
type: Gene
SIO_000068: ncbigene

position:800803:-1
position: 800803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:808694:-1
position: 808694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:800803-808694:-1:exon

LOC109804879
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804879
product: zinc finger CCHC domain-containing protein 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XM_020366781.2
SIO_010081: LOC109804879
subclass of: SO_0000673
so part of: LOC109804879
location: complement(join(800803..801748,802022..802085,803434..803686,805003..805139,805797..805877,806542..806617,806799..806880,808149..808400,808530..808694))
location: region:800803-808694:-1
so has part: feature:808530-808694:-1:exon
so has part: feature:808149-808400:-1:exon
so has part: feature:806799-806880:-1:exon
so has part: feature:806542-806617:-1:exon
so has part: feature:805797-805877:-1:exon
so has part: feature:805003-805139:-1:exon
so has part: feature:803434-803686:-1:exon
so has part: feature:802022-802085:-1:exon
so has part: feature:800803-801748:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:808530-808694:-1:exon

position:808530:-1
position: 808530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:808149-808400:-1:exon

position:808149:-1
position: 808149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:808400:-1
position: 808400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:806799-806880:-1:exon

position:806799:-1
position: 806799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:806880:-1
position: 806880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:806542-806617:-1:exon

position:806542:-1
position: 806542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:806617:-1
position: 806617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:805797-805877:-1:exon

position:805797:-1
position: 805797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:805877:-1
position: 805877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:805003-805139:-1:exon

position:805003:-1
position: 805003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:805139:-1
position: 805139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:803434-803686:-1:exon

position:803434:-1
position: 803434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:803686:-1
position: 803686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:802022-802085:-1:exon

position:802022:-1
position: 802022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:802085:-1
position: 802085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:800803-801748:-1:exon

position:801748:-1
position: 801748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109804879
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804879
product: zinc finger CCHC domain-containing protein 8, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_020366782.2
SIO_010081: LOC109804879
subclass of: SO_0000673
so part of: LOC109804879
location: complement(join(800803..801748,802022..802085,803434..803686,805003..805139,805797..805877,806542..806617,806799..806871,808149..808403,808530..808694))
location: region:800803-808694:-1
so has part: feature:808530-808694:-1:exon
so has part: feature:808149-808403:-1:exon
so has part: feature:806799-806871:-1:exon
so has part: feature:806542-806617:-1:exon
so has part: feature:805797-805877:-1:exon
so has part: feature:805003-805139:-1:exon
so has part: feature:803434-803686:-1:exon
so has part: feature:802022-802085:-1:exon
so has part: feature:800803-801748:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:808530-808694:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:808149-808403:-1:exon

position:808403:-1
position: 808403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:806799-806871:-1:exon

position:806871:-1
position: 806871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:806542-806617:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:805797-805877:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:805003-805139:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:803434-803686:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:802022-802085:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:800803-801748:-1:exon

LOC109804879
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804879
product: zinc finger CCHC domain-containing protein 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_020366780.2
SIO_010081: LOC109804879
subclass of: SO_0000673
so part of: LOC109804879
location: complement(join(800803..801748,802022..802085,803434..803686,805003..805139,805797..805877,806542..806617,806799..806880,808149..808403,808530..808694))
location: region:800803-808694:-1
so has part: feature:808530-808694:-1:exon
so has part: feature:808149-808403:-1:exon
so has part: feature:806799-806880:-1:exon
so has part: feature:806542-806617:-1:exon
so has part: feature:805797-805877:-1:exon
so has part: feature:805003-805139:-1:exon
so has part: feature:803434-803686:-1:exon
so has part: feature:802022-802085:-1:exon
so has part: feature:800803-801748:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:808530-808694:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:808149-808403:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:806799-806880:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:806542-806617:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:805797-805877:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:805003-805139:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:803434-803686:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:802022-802085:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:800803-801748:-1:exon

LOC109804879
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804879
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger CCHC domain-containing protein 8 isoform X2
translation: MAGDEPMGEIPSESSRDPNLGSESLDEEKKLEDEKCLEECLKLSVVTEEVSGRVLAENGFLSLEEGSPKRSIEIDERCAKRARITVDENQPSVHFTYNSLSRASRHKLQELLQQWSEWHAKHVSSSNDASKVLESGEETFFPAVHVGLEKTSAVSFWMENQTRNDKNKDFIPLADNSVPLYDRGYALGLTSADGSSNLDGGLEIIDDAARCFNCGSYNHSLRECTRPRDNVAVNNARKKHMSRRNQNSSSRNPTRYYQNSPAGKYDGLRPGALDNVTRQLLGLGELDPPPWLNRMREIGYPPGYLDVDDEDQPSGITIYTDKEIADQEDGEIMEADSSKPKRKMTVKFPGINAPIPENANERLWGTRAGPSSSDISRNLSSSQHRSNYNNDYDSRGYPREPRLADLRDDDPPGDPGHSSSRFSFHPRFGSHDFVPPRSPTLARSPYGRSPVHDEESPRPFSFHSLHYSSPSERLFSPSDQDYGRLGNWTSDSPYDRDRDFSSRFRDWSEDRYYRSWR
SIO_010081: LOC109804879
subclass of: SO_0000673
so part of: LOC109804879
location: complement(join(801111..801748,802022..802085,803434..803686,805003..805139,805797..805877,806542..806617,806799..806871,808149..808380))
location: region:801111-808380:-1
so has part: feature:808149-808380:-1:exon
so has part: feature:806799-806871:-1:exon
so has part: feature:806542-806617:-1:exon
so has part: feature:805797-805877:-1:exon
so has part: feature:805003-805139:-1:exon
so has part: feature:803434-803686:-1:exon
so has part: feature:802022-802085:-1:exon
so has part: feature:801111-801748:-1:exon

XP_020222371.1
type: Protein
SIO_000068: ncbiprotein

position:801111:-1
position: 801111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:808380:-1
position: 808380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:808149-808380:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:806799-806871:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:806542-806617:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:805797-805877:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:805003-805139:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:803434-803686:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:802022-802085:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:801111-801748:-1:exon

LOC109804879
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804879
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger CCHC domain-containing protein 8 isoform X1
translation: MAGDEPMGEIPSESSRDPNLGSESLDEEKKLEDEKCLEECLKLSVVTEEVSGRVLAENGFLSLEEGSPKRSIEIDERSVSGAKRARITVDENQPSVHFTYNSLSRASRHKLQELLQQWSEWHAKHVSSSNDASKVLESGEETFFPAVHVGLEKTSAVSFWMENQTRNDKNKDFIPLADNSVPLYDRGYALGLTSADGSSNLDGGLEIIDDAARCFNCGSYNHSLRECTRPRDNVAVNNARKKHMSRRNQNSSSRNPTRYYQNSPAGKYDGLRPGALDNVTRQLLGLGELDPPPWLNRMREIGYPPGYLDVDDEDQPSGITIYTDKEIADQEDGEIMEADSSKPKRKMTVKFPGINAPIPENANERLWGTRAGPSSSDISRNLSSSQHRSNYNNDYDSRGYPREPRLADLRDDDPPGDPGHSSSRFSFHPRFGSHDFVPPRSPTLARSPYGRSPVHDEESPRPFSFHSLHYSSPSERLFSPSDQDYGRLGNWTSDSPYDRDRDFSSRFRDWSEDRYYRSWR
SIO_010081: LOC109804879
subclass of: SO_0000673
so part of: LOC109804879
location: complement(join(801111..801748,802022..802085,803434..803686,805003..805139,805797..805877,806542..806617,806799..806880,808149..808380))
location: region:801111-808380:-1
so has part: feature:808149-808380:-1:exon
so has part: feature:806799-806880:-1:exon
so has part: feature:806542-806617:-1:exon
so has part: feature:805797-805877:-1:exon
so has part: feature:805003-805139:-1:exon
so has part: feature:803434-803686:-1:exon
so has part: feature:802022-802085:-1:exon
so has part: feature:801111-801748:-1:exon

XP_020222369.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:808149-808380:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:806799-806880:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:806542-806617:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:805797-805877:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:805003-805139:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:803434-803686:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:802022-802085:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:801111-801748:-1:exon

LOC109804879
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804879
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger CCHC domain-containing protein 8 isoform X1
translation: MAGDEPMGEIPSESSRDPNLGSESLDEEKKLEDEKCLEECLKLSVVTEEVSGRVLAENGFLSLEEGSPKRSIEIDERSVSGAKRARITVDENQPSVHFTYNSLSRASRHKLQELLQQWSEWHAKHVSSSNDASKVLESGEETFFPAVHVGLEKTSAVSFWMENQTRNDKNKDFIPLADNSVPLYDRGYALGLTSADGSSNLDGGLEIIDDAARCFNCGSYNHSLRECTRPRDNVAVNNARKKHMSRRNQNSSSRNPTRYYQNSPAGKYDGLRPGALDNVTRQLLGLGELDPPPWLNRMREIGYPPGYLDVDDEDQPSGITIYTDKEIADQEDGEIMEADSSKPKRKMTVKFPGINAPIPENANERLWGTRAGPSSSDISRNLSSSQHRSNYNNDYDSRGYPREPRLADLRDDDPPGDPGHSSSRFSFHPRFGSHDFVPPRSPTLARSPYGRSPVHDEESPRPFSFHSLHYSSPSERLFSPSDQDYGRLGNWTSDSPYDRDRDFSSRFRDWSEDRYYRSWR
SIO_010081: LOC109804879
subclass of: SO_0000673
so part of: LOC109804879
location: complement(join(801111..801748,802022..802085,803434..803686,805003..805139,805797..805877,806542..806617,806799..806880,808149..808380))
location: region:801111-808380:-1
so has part: feature:808149-808380:-1:exon
so has part: feature:806799-806880:-1:exon
so has part: feature:806542-806617:-1:exon
so has part: feature:805797-805877:-1:exon
so has part: feature:805003-805139:-1:exon
so has part: feature:803434-803686:-1:exon
so has part: feature:802022-802085:-1:exon
so has part: feature:801111-801748:-1:exon

XP_020222370.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:808149-808380:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:806799-806880:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:806542-806617:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:805797-805877:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:805003-805139:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:803434-803686:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:802022-802085:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:801111-801748:-1:exon

LOC109804918
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804918
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 845190..852376
location: region:845190-852376:1
so has part: feature:845190-852376:1:exon
subclass of: SO_0000010

109804918
type: Gene
SIO_000068: ncbigene

position:845190:1
position: 845190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:852376:1
position: 852376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:845190-852376:1:exon

LOC109804918
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804918
product: histone acetyltransferase HAC12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 60% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020366839.1
SIO_010081: LOC109804918
subclass of: SO_0000673
so part of: LOC109804918
location: join(845190..845389,845537..845621,845766..845963,846771..847280,848177..848458,848539..848820,849001..849129,849243..849443,849556..849698,849928..850228,850432..850577,851349..851406,851483..851872,851968..852188,852280..852376)
location: region:845190-852376:1
so has part: feature:845190-845389:1:exon
so has part: feature:845537-845621:1:exon
so has part: feature:845766-845963:1:exon
so has part: feature:846771-847280:1:exon
so has part: feature:848177-848458:1:exon
so has part: feature:848539-848820:1:exon
so has part: feature:849001-849129:1:exon
so has part: feature:849243-849443:1:exon
so has part: feature:849556-849698:1:exon
so has part: feature:849928-850228:1:exon
so has part: feature:850432-850577:1:exon
so has part: feature:851349-851406:1:exon
so has part: feature:851483-851872:1:exon
so has part: feature:851968-852188:1:exon
so has part: feature:852280-852376:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:845190-845389:1:exon

position:845389:1
position: 845389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:845537-845621:1:exon

position:845537:1
position: 845537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:845621:1
position: 845621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:845766-845963:1:exon

position:845766:1
position: 845766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:845963:1
position: 845963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:846771-847280:1:exon

position:846771:1
position: 846771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:847280:1
position: 847280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:848177-848458:1:exon

position:848177:1
position: 848177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:848458:1
position: 848458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:848539-848820:1:exon

position:848539:1
position: 848539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:848820:1
position: 848820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:849001-849129:1:exon

position:849001:1
position: 849001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:849129:1
position: 849129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:849243-849443:1:exon

position:849243:1
position: 849243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:849443:1
position: 849443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:849556-849698:1:exon

position:849556:1
position: 849556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:849698:1
position: 849698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:849928-850228:1:exon

position:849928:1
position: 849928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:850228:1
position: 850228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:850432-850577:1:exon

position:850432:1
position: 850432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:850577:1
position: 850577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:851349-851406:1:exon

position:851349:1
position: 851349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:851406:1
position: 851406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:851483-851872:1:exon

position:851483:1
position: 851483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:851872:1
position: 851872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:851968-852188:1:exon

position:851968:1
position: 851968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:852188:1
position: 852188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:852280-852376:1:exon

position:852280:1
position: 852280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109804918
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804918
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone acetyltransferase HAC12
translation: MYGKGSNLRNTCKQLPGNSSSFGSKLPLQTGFDLSHQYNTRDQVGVFPDWRKNIAIIHERNLIRNKMSGIHYKKEQAFVIANALENELFIEASSQEEYMNENTLIERMDSKLKKLTETKCREQADSYTIYTSKTLPPSGLPQPAFQKVYINKSPNFSVSAWQQPESSLLFNYSNVSECNFKQFPMPDSISNTEIKNNVIDDAFGNISKDETILSKDLDTDHMSEEPDPKINDGKVSRNLEETVTRSHSVVYALKDLMSANIEEIVPISDHVKDIRNLEQGKEDHVKDISNLEQGKEAESPNPTVNTVSLTDFFTCDQIMEHIASLRKQFNQSAKIEEQGVDVYKCQLCEIGTLPFAPVPIYCFCCGIRIKRNSYYYYRREEDDTQPCFCTVCYRNSRGGNITFNGTSVSKTDLYKKTNNGEFEEAWVECNKCKSWQHQICALYNDKRDLDNSVEYTCPICRLKEIENGMHVPLPKNAMFGAKDLPSTMLSDHIERRLFKRLMQESEDWAKVEGNKNLDEVLLAENLSVRVVLSVEKQLKVKKQFLDIFVEENYPAEFPYTSKVILLFQQIEGVDVCLFAMYVQEFGSECGNPNKRSVYISYLDSVKYFRPQRATMNGEALRTFVYHEILIGYLDFCKKRGFKTCYIWACPPIKGEDYILYCHPDTQKTPKNDKLRHWYLSMLRKAAEENIVVGLTNIYDNFFVSTRNWNSKVTAAHLPYFDGDFWSGAAMDKARIIDQECGGDYEKMKKLMTKRTLKTMGHVNPSKGTAKDILVMQKLGQTILPFKEDFIVVQLQYVCMHCHEVIMSGKRWFCTATECKTFQECQRCHTANSHTSRNGEKHTLRQVFMDDILCDTKENDVILDNGLFDTRHNLLSFCQRNSLQFDSLRRAKYSSMMILYFLKNPNLLNVGTICRVCNKQNVYQCHWKCQNCPEFTVCSACYNKKGANCHAHTLTQTFSTALSPSGNQELNQNSALELQDVIKHASQCHSTKTQPCTYPHCLQLKKLFSHASRCTIRVSGGCQYCKKVWVALSVHSRNCRDSGCQIPRCMDLKKHAEWIATQSESRRRAAVLEATANSHPH
SIO_010081: LOC109804918
subclass of: SO_0000673
so part of: LOC109804918
location: join(845190..845389,845537..845621,845766..845963,846771..847280,848177..848458,848539..848820,849001..849129,849243..849443,849556..849698,849928..850228,850432..850577,851349..851406,851483..851872,851968..852188,852280..852376)
location: region:845190-852376:1
so has part: feature:845190-845389:1:exon
so has part: feature:845537-845621:1:exon
so has part: feature:845766-845963:1:exon
so has part: feature:846771-847280:1:exon
so has part: feature:848177-848458:1:exon
so has part: feature:848539-848820:1:exon
so has part: feature:849001-849129:1:exon
so has part: feature:849243-849443:1:exon
so has part: feature:849556-849698:1:exon
so has part: feature:849928-850228:1:exon
so has part: feature:850432-850577:1:exon
so has part: feature:851349-851406:1:exon
so has part: feature:851483-851872:1:exon
so has part: feature:851968-852188:1:exon
so has part: feature:852280-852376:1:exon

XP_020222428.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:845190-845389:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:845537-845621:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:845766-845963:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:846771-847280:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:848177-848458:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:848539-848820:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:849001-849129:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:849243-849443:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:849556-849698:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:849928-850228:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:850432-850577:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:851349-851406:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:851483-851872:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:851968-852188:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:852280-852376:1:exon

LOC109805195
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109805195
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 866492..877185
location: region:866492-877185:1
so has part: feature:866492-877185:1:exon
subclass of: SO_0000010

109805195
type: Gene
SIO_000068: ncbigene

position:866492:1
position: 866492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:877185:1
position: 877185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:866492-877185:1:exon

LOC109805195
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805195
product: signal recognition particle receptor subunit alpha
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_020367204.2
SIO_010081: LOC109805195
subclass of: SO_0000673
so part of: LOC109805195
location: join(866492..866608,866831..867858,874924..875008,875330..875425,875533..875685,875785..875892,876009..876128,876395..876520,876609..876692,876798..877185)
location: region:866492-877185:1
so has part: feature:866492-866608:1:exon
so has part: feature:866831-867858:1:exon
so has part: feature:874924-875008:1:exon
so has part: feature:875330-875425:1:exon
so has part: feature:875533-875685:1:exon
so has part: feature:875785-875892:1:exon
so has part: feature:876009-876128:1:exon
so has part: feature:876395-876520:1:exon
so has part: feature:876609-876692:1:exon
so has part: feature:876798-877185:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:866492-866608:1:exon

position:866608:1
position: 866608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:866831-867858:1:exon

position:866831:1
position: 866831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:867858:1
position: 867858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:874924-875008:1:exon

position:874924:1
position: 874924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:875008:1
position: 875008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:875330-875425:1:exon

position:875330:1
position: 875330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:875425:1
position: 875425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:875533-875685:1:exon

position:875533:1
position: 875533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:875685:1
position: 875685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:875785-875892:1:exon

position:875785:1
position: 875785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:875892:1
position: 875892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:876009-876128:1:exon

position:876009:1
position: 876009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:876128:1
position: 876128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:876395-876520:1:exon

position:876395:1
position: 876395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:876520:1
position: 876520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:876609-876692:1:exon

position:876609:1
position: 876609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:876692:1
position: 876692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:876798-877185:1:exon

position:876798:1
position: 876798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109805195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805195
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal recognition particle receptor subunit alpha
translation: MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGAASYNYDAPGASYTLKWTFHNELGIVFVAVYQRILHLLYVEDLLAMVKREFSQVYDPKRTAYPDFDETFRQLKMEALARAEDLKRSNLNPVAGNTKKQVQGNNKLGFEGGNKKKSGGVVKNGGGGGGGGGGGDGGGGDGDDANGRKLENGHSNGNFVAKDANLSDVNGRENGSPNVGAFDVHKLQKLRTKGGGKKADTVAKASKAEPNKKVTKKNRVWDDAATKETKLDFTDHAGEDGDRNIDFVAADQGESMMDKEEIVSSESEEEDEEDVGKNRKPDAKSKGWFSSMFQSIAGKANLEKSDLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHNVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAIVAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSASANPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK
SIO_010081: LOC109805195
subclass of: SO_0000673
so part of: LOC109805195
location: join(866852..867858,874924..875008,875330..875425,875533..875685,875785..875892,876009..876128,876395..876520,876609..876692,876798..876923)
location: region:866852-876923:1
so has part: feature:866852-867858:1:exon
so has part: feature:874924-875008:1:exon
so has part: feature:875330-875425:1:exon
so has part: feature:875533-875685:1:exon
so has part: feature:875785-875892:1:exon
so has part: feature:876009-876128:1:exon
so has part: feature:876395-876520:1:exon
so has part: feature:876609-876692:1:exon
so has part: feature:876798-876923:1:exon

XP_020222793.1
type: Protein
SIO_000068: ncbiprotein

position:866852:1
position: 866852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:876923:1
position: 876923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:866852-867858:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:874924-875008:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:875330-875425:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:875533-875685:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:875785-875892:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:876009-876128:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:876395-876520:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:876609-876692:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:876798-876923:1:exon

LOC109804741
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804741
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 887357..890546
location: region:887357-890546:1
so has part: feature:887357-890546:1:exon
subclass of: SO_0000010

109804741
type: Gene
SIO_000068: ncbigene

position:887357:1
position: 887357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:890546:1
position: 890546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:887357-890546:1:exon

LOC109804741
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804741
product: APO protein 2, chloroplastic, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_029272740.1
SIO_010081: LOC109804741
subclass of: SO_0000673
so part of: LOC109804741
location: join(887357..887477,887565..887668,887957..888309,889603..890546)
location: region:887357-890546:1
so has part: feature:887357-887477:1:exon
so has part: feature:887565-887668:1:exon
so has part: feature:887957-888309:1:exon
so has part: feature:889603-890546:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:887357-887477:1:exon

position:887477:1
position: 887477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:887565-887668:1:exon

position:887565:1
position: 887565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:887668:1
position: 887668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:887957-888309:1:exon

position:887957:1
position: 887957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:888309:1
position: 888309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:889603-890546:1:exon

position:889603:1
position: 889603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109804741
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804741
product: APO protein 2, chloroplastic, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XM_020366574.2
SIO_010081: LOC109804741
subclass of: SO_0000673
so part of: LOC109804741
location: join(887357..887477,887565..887668,887960..888309,889603..890546)
location: region:887357-890546:1
so has part: feature:887357-887477:1:exon
so has part: feature:887565-887668:1:exon
so has part: feature:887960-888309:1:exon
so has part: feature:889603-890546:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:887357-887477:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:887565-887668:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:887960-888309:1:exon

position:887960:1
position: 887960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:889603-890546:1:exon

LOC109804741
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804741
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: APO protein 2, chloroplastic isoform X1
translation: MQCGAPVAELVSSGMNVTMTNAKGIITRDSLLLMPNSLSSLSSLHSLQQYGSSNIRVPVKIRIQQEKFCQRALTIRNEVPQNADFPRQYSRKEKKPFPVPVIELRRAARERMKKMKDEPRKPMPAPKNGLLVKNLISTAYNVYNARTTLINNLKKLLKVVPVHACGWCSEIHVGPVGHPFKSCKGPQTNIRKGLHEWTNAHVEDILIPVEAYHLFDRLGKRIAHEERFSIPRIPAVVELCIQAGVEIPEFPTKRRRKPIIRIGRKEFIDADESDLPDKVSEGPLKPLLAEIPDSEIEAPLENEVAPLAEETLQAWERMRKGAKRLMRMYNVRVCGYCPEIHVGARGHKAQNCGAHKHQQRNGQHGWQSAVLDDLIPPRYVWHVPDINAPLERELRNFYGQAPAVVEICIQAGAALPEQYKSTMRLDVGIPSNSKEADMVV
SIO_010081: LOC109804741
subclass of: SO_0000673
so part of: LOC109804741
location: join(887438..887477,887565..887668,887957..888309,889603..890428)
location: region:887438-890428:1
so has part: feature:887438-887477:1:exon
so has part: feature:887565-887668:1:exon
so has part: feature:887957-888309:1:exon
so has part: feature:889603-890428:1:exon

XP_029128573.1
type: Protein
SIO_000068: ncbiprotein

position:887438:1
position: 887438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:890428:1
position: 890428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:887438-887477:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:887565-887668:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:887957-888309:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:889603-890428:1:exon

LOC109804741
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804741
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: APO protein 2, chloroplastic isoform X2
translation: MQCGAPVAELVSSGMNVTMTNAKGIITRDSLLLMPNSLSSLSSLHSLQYGSSNIRVPVKIRIQQEKFCQRALTIRNEVPQNADFPRQYSRKEKKPFPVPVIELRRAARERMKKMKDEPRKPMPAPKNGLLVKNLISTAYNVYNARTTLINNLKKLLKVVPVHACGWCSEIHVGPVGHPFKSCKGPQTNIRKGLHEWTNAHVEDILIPVEAYHLFDRLGKRIAHEERFSIPRIPAVVELCIQAGVEIPEFPTKRRRKPIIRIGRKEFIDADESDLPDKVSEGPLKPLLAEIPDSEIEAPLENEVAPLAEETLQAWERMRKGAKRLMRMYNVRVCGYCPEIHVGARGHKAQNCGAHKHQQRNGQHGWQSAVLDDLIPPRYVWHVPDINAPLERELRNFYGQAPAVVEICIQAGAALPEQYKSTMRLDVGIPSNSKEADMVV
SIO_010081: LOC109804741
subclass of: SO_0000673
so part of: LOC109804741
location: join(887438..887477,887565..887668,887960..888309,889603..890428)
location: region:887438-890428:1
so has part: feature:887438-887477:1:exon
so has part: feature:887565-887668:1:exon
so has part: feature:887960-888309:1:exon
so has part: feature:889603-890428:1:exon

XP_020222163.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:887438-887477:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:887565-887668:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:887960-888309:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:889603-890428:1:exon

LOC109805276
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109805276
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(892764..897383)
location: region:892764-897383:-1
so has part: feature:892764-897383:-1:exon
subclass of: SO_0000010

109805276
type: Gene
SIO_000068: ncbigene

position:892764:-1
position: 892764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:897383:-1
position: 897383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:892764-897383:-1:exon

LOC109805276
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805276
product: disease resistance-like protein DSC1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_020367302.2
SIO_010081: LOC109805276
subclass of: SO_0000673
so part of: LOC109805276
location: complement(join(892764..894513,894927..895014,895176..895478,895578..897383))
location: region:892764-897383:-1
so has part: feature:895578-897383:-1:exon
so has part: feature:895176-895478:-1:exon
so has part: feature:894927-895014:-1:exon
so has part: feature:892764-894513:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:895578-897383:-1:exon

position:895578:-1
position: 895578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:895176-895478:-1:exon

position:895176:-1
position: 895176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:895478:-1
position: 895478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:894927-895014:-1:exon

position:894927:-1
position: 894927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:895014:-1
position: 895014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:892764-894513:-1:exon

position:894513:-1
position: 894513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109805276
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805276
product: disease resistance-like protein DSC1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_020367301.2
SIO_010081: LOC109805276
subclass of: SO_0000673
so part of: LOC109805276
location: complement(join(892764..893054,893172..894513,894927..895014,895176..895478,895578..897382))
location: region:892764-897382:-1
so has part: feature:895578-897382:-1:exon
so has part: feature:895176-895478:-1:exon
so has part: feature:894927-895014:-1:exon
so has part: feature:893172-894513:-1:exon
so has part: feature:892764-893054:-1:exon

position:897382:-1
position: 897382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:895578-897382:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:895176-895478:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:894927-895014:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:893172-894513:-1:exon

position:893172:-1
position: 893172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:892764-893054:-1:exon

position:893054:-1
position: 893054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109805276
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805276
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disease resistance-like protein DSC1
translation: MGGIGKTTLATALFEKLSYEFEGRCFLTNVREKSDKLGALRDELLSKLLENKNYGFDNFDLSRLRRKKVFIVLDDVATSQQLEKLIEEYDFLGPGSRVIVTTRNKQILSLVDIIYQVQELSSHHSLQLFCLTVFGEKQSKEGYEDLSISAISYCKGIPLALKVLGASLRKKSKVVWECELRKLRKIPNKEIYNVLKLSYDGLDRSQKDIFLDIACFFKGWARDRLTSILEACDFFGASGIQVLLDKALITVSDRNHIKMHDLIQEMGWEIVHEESIKDLGRRSRLWKHEEVHHVLKYNKGTDFVEGIILDLEKLAGDLYLSSDSLARMTNMRFLKIYRQKWGRKFSLYLPNGLESLSYKLRYLEWEGFCLKSLPSNFCAEQLVELHMWDSKLKKLWDGVQNLVNLKTIDLDYSQDLFEIPDLSMAKKLERVSLFGCESLCQLHPSILSLPKLTYLFLSGCTKIESLNIHSKSLSVLRLRGCSSLKEFSVTSEEMTHLDLSQTAICALLSSMLSLPKLTYLYLSGCKEIVSLNVHLKSLRVLTLTCCSSLEEFSVTAERLTLLELSDTAICALPSSIGHLLSIEELDLRGTNIEHLPKSIKVLSMLRILWLNDCKKLLSLPELPPSLRELYLNDCRKLMSLPELPQSVKEVSAFNCISLETDITQGLVLQHMLQSHVHQQYLYNPVYFDGGYFIFPGDHVFNECELLTTKSSINIPSLPKSHLWGYIFCIILSEGLVSDHQVFCSIYQDDILVGCDHRRFIGCENLISDHVLFWYHNVSKFRRLSEVYDPFSNMAFIFEFNGNKDTIKGCGVFPVYATASGFNLMEIFDNESQQRANGVEYGGSNNGSEENREQLCATKRRRTARDNLPVITSSSP
SIO_010081: LOC109805276
subclass of: SO_0000673
so part of: LOC109805276
location: complement(join(893174..894513,894927..895014,895176..895478,895578..896474))
location: region:893174-896474:-1
so has part: feature:895578-896474:-1:exon
so has part: feature:895176-895478:-1:exon
so has part: feature:894927-895014:-1:exon
so has part: feature:893174-894513:-1:exon

XP_020222890.1
type: Protein
SIO_000068: ncbiprotein

position:893174:-1
position: 893174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:896474:-1
position: 896474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:895578-896474:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:895176-895478:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:894927-895014:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:893174-894513:-1:exon

LOC109805276
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805276
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disease resistance-like protein DSC1
translation: MGGIGKTTLATALFEKLSYEFEGRCFLTNVREKSDKLGALRDELLSKLLENKNYGFDNFDLSRLRRKKVFIVLDDVATSQQLEKLIEEYDFLGPGSRVIVTTRNKQILSLVDIIYQVQELSSHHSLQLFCLTVFGEKQSKEGYEDLSISAISYCKGIPLALKVLGASLRKKSKVVWECELRKLRKIPNKEIYNVLKLSYDGLDRSQKDIFLDIACFFKGWARDRLTSILEACDFFGASGIQVLLDKALITVSDRNHIKMHDLIQEMGWEIVHEESIKDLGRRSRLWKHEEVHHVLKYNKGTDFVEGIILDLEKLAGDLYLSSDSLARMTNMRFLKIYRQKWGRKFSLYLPNGLESLSYKLRYLEWEGFCLKSLPSNFCAEQLVELHMWDSKLKKLWDGVQNLVNLKTIDLDYSQDLFEIPDLSMAKKLERVSLFGCESLCQLHPSILSLPKLTYLFLSGCTKIESLNIHSKSLSVLRLRGCSSLKEFSVTSEEMTHLDLSQTAICALLSSMLSLPKLTYLYLSGCKEIVSLNVHLKSLRVLTLTCCSSLEEFSVTAERLTLLELSDTAICALPSSIGHLLSIEELDLRGTNIEHLPKSIKVLSMLRILWLNDCKKLLSLPELPPSLRELYLNDCRKLMSLPELPQSVKEVSAFNCISLETDITQGLVLQHMLQSHVHQQYLYNPVYFDGGYFIFPGDHVFNECELLTTKSSINIPSLPKSHLWGYIFCIILSEGLVSDHQVFCSIYQDDILVGCDHRRFIGCENLISDHVLFWYHNVSKFRRLSEVYDPFSNMAFIFEFNGNKDTIKGCGVFPVYATASGFNLMEIFDNESQQRANGVEYGGSNNGSEENREQLCATKRRRTARDNLPVITSSSP
SIO_010081: LOC109805276
subclass of: SO_0000673
so part of: LOC109805276
location: complement(join(893174..894513,894927..895014,895176..895478,895578..896474))
location: region:893174-896474:-1
so has part: feature:895578-896474:-1:exon
so has part: feature:895176-895478:-1:exon
so has part: feature:894927-895014:-1:exon
so has part: feature:893174-894513:-1:exon

XP_020222891.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:895578-896474:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:895176-895478:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:894927-895014:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:893174-894513:-1:exon

LOC109804922
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804922
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 925618..927926
location: region:925618-927926:1
so has part: feature:925618-927926:1:exon
subclass of: SO_0000010

109804922
type: Gene
SIO_000068: ncbigene

position:925618:1
position: 925618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:927926:1
position: 927926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:925618-927926:1:exon

LOC109804922
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804922
product: signal recognition particle receptor subunit alpha homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_029272759.1
SIO_010081: LOC109804922
subclass of: SO_0000673
so part of: LOC109804922
location: join(925618..925749,926071..926166,926274..926426,926526..926633,926750..926869,927136..927261,927350..927433,927539..927926)
location: region:925618-927926:1
so has part: feature:925618-925749:1:exon
so has part: feature:926071-926166:1:exon
so has part: feature:926274-926426:1:exon
so has part: feature:926526-926633:1:exon
so has part: feature:926750-926869:1:exon
so has part: feature:927136-927261:1:exon
so has part: feature:927350-927433:1:exon
so has part: feature:927539-927926:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:925618-925749:1:exon

position:925749:1
position: 925749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:926071-926166:1:exon

position:926071:1
position: 926071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:926166:1
position: 926166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:926274-926426:1:exon

position:926274:1
position: 926274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:926426:1
position: 926426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:926526-926633:1:exon

position:926526:1
position: 926526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:926633:1
position: 926633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:926750-926869:1:exon

position:926750:1
position: 926750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:926869:1
position: 926869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:927136-927261:1:exon

position:927136:1
position: 927136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:927261:1
position: 927261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:927350-927433:1:exon

position:927350:1
position: 927350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:927433:1
position: 927433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:927539-927926:1:exon

position:927539:1
position: 927539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109804922
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804922
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal recognition particle receptor subunit alpha homolog
translation: MFSHILVCSIAGKANLEKSDLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHNVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAIVAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSASANPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK
SIO_010081: LOC109804922
subclass of: SO_0000673
so part of: LOC109804922
location: join(925639..925749,926071..926166,926274..926426,926526..926633,926750..926869,927136..927261,927350..927433,927539..927664)
location: region:925639-927664:1
so has part: feature:925639-925749:1:exon
so has part: feature:926071-926166:1:exon
so has part: feature:926274-926426:1:exon
so has part: feature:926526-926633:1:exon
so has part: feature:926750-926869:1:exon
so has part: feature:927136-927261:1:exon
so has part: feature:927350-927433:1:exon
so has part: feature:927539-927664:1:exon

XP_029128592.1
type: Protein
SIO_000068: ncbiprotein

position:925639:1
position: 925639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:927664:1
position: 927664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:925639-925749:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:926071-926166:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:926274-926426:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:926526-926633:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:926750-926869:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:927136-927261:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:927350-927433:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:927539-927664:1:exon

LOC109805151
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109805151
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 941345..949001
location: region:941345-949001:1
so has part: feature:941345-949001:1:exon
subclass of: SO_0000010

109805151
type: Gene
SIO_000068: ncbigene

position:941345:1
position: 941345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:949001:1
position: 949001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:941345-949001:1:exon

LOC109805151
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805151
product: 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_020367147.2
SIO_010081: LOC109805151
subclass of: SO_0000673
so part of: LOC109805151
location: join(941345..941558,941646..941689,941765..941825,942016..942177,942276..942682,942843..942944,947245..947537,947792..948289,948560..949001)
location: region:941345-949001:1
so has part: feature:941345-941558:1:exon
so has part: feature:941646-941689:1:exon
so has part: feature:941765-941825:1:exon
so has part: feature:942016-942177:1:exon
so has part: feature:942276-942682:1:exon
so has part: feature:942843-942944:1:exon
so has part: feature:947245-947537:1:exon
so has part: feature:947792-948289:1:exon
so has part: feature:948560-949001:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:941345-941558:1:exon

position:941558:1
position: 941558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:941646-941689:1:exon

position:941646:1
position: 941646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:941689:1
position: 941689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:941765-941825:1:exon

position:941765:1
position: 941765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:941825:1
position: 941825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:942016-942177:1:exon

position:942016:1
position: 942016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:942177:1
position: 942177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:942276-942682:1:exon

position:942276:1
position: 942276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:942682:1
position: 942682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:942843-942944:1:exon

position:942843:1
position: 942843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:942944:1
position: 942944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:947245-947537:1:exon

position:947245:1
position: 947245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:947537:1
position: 947537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:947792-948289:1:exon

position:947792:1
position: 947792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:948289:1
position: 948289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:948560-949001:1:exon

position:948560:1
position: 948560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109805151
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805151
product: 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_020367146.2
SIO_010081: LOC109805151
subclass of: SO_0000673
so part of: LOC109805151
location: join(941345..941558,941646..941689,941765..941825,942016..942177,942276..942682,942843..942944,947245..947537,947792..948317)
location: region:941345-948317:1
so has part: feature:941345-941558:1:exon
so has part: feature:941646-941689:1:exon
so has part: feature:941765-941825:1:exon
so has part: feature:942016-942177:1:exon
so has part: feature:942276-942682:1:exon
so has part: feature:942843-942944:1:exon
so has part: feature:947245-947537:1:exon
so has part: feature:947792-948317:1:exon

position:948317:1
position: 948317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:941345-941558:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:941646-941689:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:941765-941825:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:942016-942177:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:942276-942682:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:942843-942944:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:947245-947537:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:947792-948317:1:exon

LOC109805151
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805151
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic
translation: MEVSIHRRLICHNGARFFARPSSTLLCAQRGTVTYKHPILGTSHKASLCSLQGISRKHENVSWVSVSPKLWVRSKFPRDVVVRSELTAAGSAGDGYSLPELKVVSKARGACFYVVTAFAAVFLFMLMMVGHPLVLLFDRYRRKFHHFIAKVWASLTVAPFFKIEFEGLENLPHPDTPAVYVSNHQSFLDIYTLLTLGRSFKFISKTGIFLYPIIGWAMFFLGVIPLKRMDSRSQLDCLKRCMDLIKKGASVFFFPEGTRSKDGKLGTFKKGAFSVAAKTNAPVVPITLIGTGQIMPAGKEGIVNVGSVKVVIHKPLDGKDPDLLCKEARKTIASVLTQS
SIO_010081: LOC109805151
subclass of: SO_0000673
so part of: LOC109805151
location: join(941528..941558,941646..941689,941765..941825,942016..942177,942276..942682,942843..942944,947245..947457)
location: region:941528-947457:1
so has part: feature:941528-941558:1:exon
so has part: feature:941646-941689:1:exon
so has part: feature:941765-941825:1:exon
so has part: feature:942016-942177:1:exon
so has part: feature:942276-942682:1:exon
so has part: feature:942843-942944:1:exon
so has part: feature:947245-947457:1:exon

XP_020222735.1
type: Protein
SIO_000068: ncbiprotein

position:941528:1
position: 941528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:947457:1
position: 947457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:941528-941558:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:941646-941689:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:941765-941825:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:942016-942177:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:942276-942682:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:942843-942944:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:947245-947457:1:exon

LOC109805151
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805151
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic
translation: MEVSIHRRLICHNGARFFARPSSTLLCAQRGTVTYKHPILGTSHKASLCSLQGISRKHENVSWVSVSPKLWVRSKFPRDVVVRSELTAAGSAGDGYSLPELKVVSKARGACFYVVTAFAAVFLFMLMMVGHPLVLLFDRYRRKFHHFIAKVWASLTVAPFFKIEFEGLENLPHPDTPAVYVSNHQSFLDIYTLLTLGRSFKFISKTGIFLYPIIGWAMFFLGVIPLKRMDSRSQLDCLKRCMDLIKKGASVFFFPEGTRSKDGKLGTFKKGAFSVAAKTNAPVVPITLIGTGQIMPAGKEGIVNVGSVKVVIHKPLDGKDPDLLCKEARKTIASVLTQS
SIO_010081: LOC109805151
subclass of: SO_0000673
so part of: LOC109805151
location: join(941528..941558,941646..941689,941765..941825,942016..942177,942276..942682,942843..942944,947245..947457)
location: region:941528-947457:1
so has part: feature:941528-941558:1:exon
so has part: feature:941646-941689:1:exon
so has part: feature:941765-941825:1:exon
so has part: feature:942016-942177:1:exon
so has part: feature:942276-942682:1:exon
so has part: feature:942843-942944:1:exon
so has part: feature:947245-947457:1:exon

XP_020222736.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:941528-941558:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:941646-941689:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:941765-941825:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:942016-942177:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:942276-942682:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:942843-942944:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:947245-947457:1:exon

LOC109805340
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109805340
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 956700..968310
location: region:956700-968310:1
so has part: feature:956700-968310:1:exon
subclass of: SO_0000010

109805340
type: Gene
SIO_000068: ncbigene

position:956700:1
position: 956700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:968310:1
position: 968310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:956700-968310:1:exon

LOC109805340
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805340
product: probable cyclic nucleotide-gated ion channel 5, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_020367383.2
SIO_010081: LOC109805340
subclass of: SO_0000673
so part of: LOC109805340
location: join(956700..956868,957646..957735,959227..959809,961522..961734,961919..962220,965227..965338,967371..968310)
location: region:956700-968310:1
so has part: feature:956700-956868:1:exon
so has part: feature:957646-957735:1:exon
so has part: feature:959227-959809:1:exon
so has part: feature:961522-961734:1:exon
so has part: feature:961919-962220:1:exon
so has part: feature:965227-965338:1:exon
so has part: feature:967371-968310:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:956700-956868:1:exon

position:956868:1
position: 956868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:957646-957735:1:exon

position:957646:1
position: 957646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:957735:1
position: 957735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:959227-959809:1:exon

position:959227:1
position: 959227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:959809:1
position: 959809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:961522-961734:1:exon

position:961522:1
position: 961522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:961734:1
position: 961734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:961919-962220:1:exon

position:961919:1
position: 961919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:962220:1
position: 962220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:965227-965338:1:exon

position:965227:1
position: 965227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:965338:1
position: 965338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:967371-968310:1:exon

position:967371:1
position: 967371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109805340
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805340
product: probable cyclic nucleotide-gated ion channel 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_020367381.2
SIO_010081: LOC109805340
subclass of: SO_0000673
so part of: LOC109805340
location: join(956702..956868,956984..957065,957646..957735,959227..959809,961522..961734,961919..962220,965227..965338,966537..966773,967371..968310)
location: region:956702-968310:1
so has part: feature:956702-956868:1:exon
so has part: feature:956984-957065:1:exon
so has part: feature:957646-957735:1:exon
so has part: feature:959227-959809:1:exon
so has part: feature:961522-961734:1:exon
so has part: feature:961919-962220:1:exon
so has part: feature:965227-965338:1:exon
so has part: feature:966537-966773:1:exon
so has part: feature:967371-968310:1:exon

position:956702:1
position: 956702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:956702-956868:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:956984-957065:1:exon

position:956984:1
position: 956984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:957065:1
position: 957065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:957646-957735:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:959227-959809:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:961522-961734:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:961919-962220:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:965227-965338:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:966537-966773:1:exon

position:966537:1
position: 966537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:966773:1
position: 966773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:967371-968310:1:exon

LOC109805340
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805340
product: probable cyclic nucleotide-gated ion channel 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_020367380.2
SIO_010081: LOC109805340
subclass of: SO_0000673
so part of: LOC109805340
location: join(956702..956868,957646..957735,959227..959809,961522..961734,961919..962220,965227..965338,966537..966773,967371..968310)
location: region:956702-968310:1
so has part: feature:956702-956868:1:exon
so has part: feature:957646-957735:1:exon
so has part: feature:959227-959809:1:exon
so has part: feature:961522-961734:1:exon
so has part: feature:961919-962220:1:exon
so has part: feature:965227-965338:1:exon
so has part: feature:966537-966773:1:exon
so has part: feature:967371-968310:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:956702-956868:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:957646-957735:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:959227-959809:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:961522-961734:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:961919-962220:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:965227-965338:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:966537-966773:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:967371-968310:1:exon

LOC109805340
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805340
product: probable cyclic nucleotide-gated ion channel 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_020367382.2
SIO_010081: LOC109805340
subclass of: SO_0000673
so part of: LOC109805340
location: join(957646..957808,959227..959809,961522..961734,961919..962220,965227..965338,966537..966773,967371..968310)
location: region:957646-968310:1
so has part: feature:957646-957808:1:exon
so has part: feature:959227-959809:1:exon
so has part: feature:961522-961734:1:exon
so has part: feature:961919-962220:1:exon
so has part: feature:965227-965338:1:exon
so has part: feature:966537-966773:1:exon
so has part: feature:967371-968310:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:957646-957808:1:exon

position:957808:1
position: 957808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:959227-959809:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:961522-961734:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:961919-962220:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:965227-965338:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:966537-966773:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:967371-968310:1:exon

LOC109805340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805340
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable cyclic nucleotide-gated ion channel 5 isoform X1
translation: MFDCGYKSQYVGGQREKFVRLDDLDSRLSSSSEAGVKTCGFSIDKLSHGGHGSSTTSRSFKRRIRKGSEGLKSIGRSLGIGVSWAVFPEDLKVSEKKIFDPQDKFLLLWNKLFVISCILAVSVDPLFFYLPVINDSLHCLGIDRKLAITVTTLRTFIDAFYLIHMALQFRTAFIAPSSRVFGRGELVIDPAQIAKRYLQRYFIIDFLSVLPLPQIVVWRFLQRSKGSDVLATKRALMFIILLQYIPRFFRMVPLTSELKRTAGVFAETAWAGAAYYLLLFMLASHIVGSFWYLLAVERNDFCWQKACSGNGYNKNFLYCGNQYMEGYSAWQSRSKDILMSQCSADNDNSPFDFGIFKQALSSGIVSSKKFFSKYCYCLWWGLQNLSTLGQGLETSTYTGEVIFSIALAIAGLILFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPQELRERVRRYDQYKWLATRGVDEDSLVQSLPKDLRRDIKRHLCLALVRRVPLFESMDERLLDAICERLKPCLFTESTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRGFLKEADFCGEELLTWALDPKAGSNLPSSTRTVKALTEVEAFALTAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSKRKTMELSRKEEPEESEGTRSNASGNSYSLGATFLASRFAANALRGVHRNREAKSARELVKLQKPPEPDFTADDAD
SIO_010081: LOC109805340
subclass of: SO_0000673
so part of: LOC109805340
location: join(957677..957735,959227..959809,961522..961734,961919..962220,965227..965338,966537..966773,967371..968063)
location: region:957677-968063:1
so has part: feature:957677-957735:1:exon
so has part: feature:959227-959809:1:exon
so has part: feature:961522-961734:1:exon
so has part: feature:961919-962220:1:exon
so has part: feature:965227-965338:1:exon
so has part: feature:966537-966773:1:exon
so has part: feature:967371-968063:1:exon

XP_020222969.1
type: Protein
SIO_000068: ncbiprotein

position:957677:1
position: 957677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:968063:1
position: 968063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:957677-957735:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:959227-959809:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:961522-961734:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:961919-962220:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:965227-965338:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:966537-966773:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:967371-968063:1:exon

LOC109805340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805340
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable cyclic nucleotide-gated ion channel 5 isoform X1
translation: MFDCGYKSQYVGGQREKFVRLDDLDSRLSSSSEAGVKTCGFSIDKLSHGGHGSSTTSRSFKRRIRKGSEGLKSIGRSLGIGVSWAVFPEDLKVSEKKIFDPQDKFLLLWNKLFVISCILAVSVDPLFFYLPVINDSLHCLGIDRKLAITVTTLRTFIDAFYLIHMALQFRTAFIAPSSRVFGRGELVIDPAQIAKRYLQRYFIIDFLSVLPLPQIVVWRFLQRSKGSDVLATKRALMFIILLQYIPRFFRMVPLTSELKRTAGVFAETAWAGAAYYLLLFMLASHIVGSFWYLLAVERNDFCWQKACSGNGYNKNFLYCGNQYMEGYSAWQSRSKDILMSQCSADNDNSPFDFGIFKQALSSGIVSSKKFFSKYCYCLWWGLQNLSTLGQGLETSTYTGEVIFSIALAIAGLILFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPQELRERVRRYDQYKWLATRGVDEDSLVQSLPKDLRRDIKRHLCLALVRRVPLFESMDERLLDAICERLKPCLFTESTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRGFLKEADFCGEELLTWALDPKAGSNLPSSTRTVKALTEVEAFALTAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSKRKTMELSRKEEPEESEGTRSNASGNSYSLGATFLASRFAANALRGVHRNREAKSARELVKLQKPPEPDFTADDAD
SIO_010081: LOC109805340
subclass of: SO_0000673
so part of: LOC109805340
location: join(957677..957735,959227..959809,961522..961734,961919..962220,965227..965338,966537..966773,967371..968063)
location: region:957677-968063:1
so has part: feature:957677-957735:1:exon
so has part: feature:959227-959809:1:exon
so has part: feature:961522-961734:1:exon
so has part: feature:961919-962220:1:exon
so has part: feature:965227-965338:1:exon
so has part: feature:966537-966773:1:exon
so has part: feature:967371-968063:1:exon

XP_020222970.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:957677-957735:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:959227-959809:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:961522-961734:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:961919-962220:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:965227-965338:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:966537-966773:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:967371-968063:1:exon

LOC109805340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805340
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable cyclic nucleotide-gated ion channel 6 isoform X3
translation: MFDCGYKSQYVGGQREKFVRLDDLDSRLSSSSEAGVKTCGFSIDKLSHGGHGSSTTSRSFKRRIRKGSEGLKSIGRSLGIGVSWAVFPEDLKVSEKKIFDPQDKFLLLWNKLFVISCILAVSVDPLFFYLPVINDSLHCLGIDRKLAITVTTLRTFIDAFYLIHMALQFRTAFIAPSSRVFGRGELVIDPAQIAKRYLQRYFIIDFLSVLPLPQIVVWRFLQRSKGSDVLATKRALMFIILLQYIPRFFRMVPLTSELKRTAGVFAETAWAGAAYYLLLFMLASHIVGSFWYLLAVERNDFCWQKACSGNGYNKNFLYCGNQYMEGYSAWQSRSKDILMSQCSADNDNSPFDFGIFKQALSSGIVSSKKFFSKYCYCLWWGLQNLSTLGQGLETSTYTGEVIFSIALAIAGLILFALLIGNMQVPLFESMDERLLDAICERLKPCLFTESTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRGFLKEADFCGEELLTWALDPKAGSNLPSSTRTVKALTEVEAFALTAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSKRKTMELSRKEEPEESEGTRSNASGNSYSLGATFLASRFAANALRGVHRNREAKSARELVKLQKPPEPDFTADDAD
SIO_010081: LOC109805340
subclass of: SO_0000673
so part of: LOC109805340
location: join(957677..957735,959227..959809,961522..961734,961919..962220,965227..965338,967371..968063)
location: region:957677-968063:1
so has part: feature:957677-957735:1:exon
so has part: feature:959227-959809:1:exon
so has part: feature:961522-961734:1:exon
so has part: feature:961919-962220:1:exon
so has part: feature:965227-965338:1:exon
so has part: feature:967371-968063:1:exon

XP_020222972.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:957677-957735:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:959227-959809:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:961522-961734:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:961919-962220:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:965227-965338:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:967371-968063:1:exon

LOC109805340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805340
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable cyclic nucleotide-gated ion channel 5 isoform X2
translation: MKEKRVSNIYMLDDLDSRLSSSSEAGVKTCGFSIDKLSHGGHGSSTTSRSFKRRIRKGSEGLKSIGRSLGIGVSWAVFPEDLKVSEKKIFDPQDKFLLLWNKLFVISCILAVSVDPLFFYLPVINDSLHCLGIDRKLAITVTTLRTFIDAFYLIHMALQFRTAFIAPSSRVFGRGELVIDPAQIAKRYLQRYFIIDFLSVLPLPQIVVWRFLQRSKGSDVLATKRALMFIILLQYIPRFFRMVPLTSELKRTAGVFAETAWAGAAYYLLLFMLASHIVGSFWYLLAVERNDFCWQKACSGNGYNKNFLYCGNQYMEGYSAWQSRSKDILMSQCSADNDNSPFDFGIFKQALSSGIVSSKKFFSKYCYCLWWGLQNLSTLGQGLETSTYTGEVIFSIALAIAGLILFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPQELRERVRRYDQYKWLATRGVDEDSLVQSLPKDLRRDIKRHLCLALVRRVPLFESMDERLLDAICERLKPCLFTESTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRGFLKEADFCGEELLTWALDPKAGSNLPSSTRTVKALTEVEAFALTAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSKRKTMELSRKEEPEESEGTRSNASGNSYSLGATFLASRFAANALRGVHRNREAKSARELVKLQKPPEPDFTADDAD
SIO_010081: LOC109805340
subclass of: SO_0000673
so part of: LOC109805340
location: join(957777..957808,959227..959809,961522..961734,961919..962220,965227..965338,966537..966773,967371..968063)
location: region:957777-968063:1
so has part: feature:957777-957808:1:exon
so has part: feature:959227-959809:1:exon
so has part: feature:961522-961734:1:exon
so has part: feature:961919-962220:1:exon
so has part: feature:965227-965338:1:exon
so has part: feature:966537-966773:1:exon
so has part: feature:967371-968063:1:exon

XP_020222971.1
type: Protein
SIO_000068: ncbiprotein

position:957777:1
position: 957777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:957777-957808:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:959227-959809:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:961522-961734:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:961919-962220:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:965227-965338:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:966537-966773:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:967371-968063:1:exon

LOC109805086
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109805086
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(969752..973488)
location: region:969752-973488:-1
so has part: feature:969752-973488:-1:exon
subclass of: SO_0000010

109805086
type: Gene
SIO_000068: ncbigene

position:969752:-1
position: 969752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:973488:-1
position: 973488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:969752-973488:-1:exon

LOC109805086
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805086
product: transmembrane 9 superfamily member 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_020367041.2
SIO_010081: LOC109805086
subclass of: SO_0000673
so part of: LOC109805086
location: complement(join(969752..971207,971307..971457,971677..971789,971867..971975,972053..972162,972375..972539,973242..973488))
location: region:969752-973488:-1
so has part: feature:973242-973488:-1:exon
so has part: feature:972375-972539:-1:exon
so has part: feature:972053-972162:-1:exon
so has part: feature:971867-971975:-1:exon
so has part: feature:971677-971789:-1:exon
so has part: feature:971307-971457:-1:exon
so has part: feature:969752-971207:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:973242-973488:-1:exon

position:973242:-1
position: 973242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:972375-972539:-1:exon

position:972375:-1
position: 972375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:972539:-1
position: 972539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:972053-972162:-1:exon

position:972053:-1
position: 972053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:972162:-1
position: 972162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:971867-971975:-1:exon

position:971867:-1
position: 971867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:971975:-1
position: 971975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:971677-971789:-1:exon

position:971677:-1
position: 971677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:971789:-1
position: 971789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:971307-971457:-1:exon

position:971307:-1
position: 971307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:971457:-1
position: 971457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:969752-971207:-1:exon

position:971207:-1
position: 971207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109805086
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805086
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane 9 superfamily member 10
translation: MARVLLARNLFLWISLCFLLLVHVHVGTCFYLPGVAPEDFHKGDLLRVKVNKLSSTKTQLPYSYYSLPYCHPDHIVDSAENLGEVLRGDRIENSPYVFKMREPQMCNVVCRLTLDEKTAKEFKEKIDDEYRVNMILDNLPLVVPLRRPDQESSLVYLHGFLVGLKGQYAGNKDEKHFIHNHLTFIVKYHRDPVTEMSRIVGFEVKPFSVKHEYEGEWDNNTRLTTCDPHAKKIVSGSEPPQEVEDKKEIIFSYDVEFQESDVKWASRWDSYLLMADDQIHWFSIINSLMIVLFLSGMVAMIMLRTLYRDISKYNQLETQEEAQEESGWKLVHGDVFRPPSNSDLLCVYVGTGVQFLGMILVTMIFAALGFLSPSNRGGLMTAMLLLWVLMGLCGGYSSVRLYKMFKGIEWKRIALRTAFTFPAIAFAIFFVLNALIWGQRSSGAVPFGTMFALVFLWFGISVPLVFLGGHFGYKKPLAEDPVKTNKIARQIPEQPWYMNSVFSILIGGILPFGAVFIELFFILTSIWLHQFYYIFGFLFIVFLILIVTCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSALYLFLYAAFYFFTKLEITKPISGVLYFGYMLLLSYGFFVVTGTIGFYSCFWFIRLIYSSVKID
SIO_010081: LOC109805086
subclass of: SO_0000673
so part of: LOC109805086
location: complement(join(970050..971207,971307..971457,971677..971789,971867..971975,972053..972162,972375..972539,973242..973367))
location: region:970050-973367:-1
so has part: feature:973242-973367:-1:exon
so has part: feature:972375-972539:-1:exon
so has part: feature:972053-972162:-1:exon
so has part: feature:971867-971975:-1:exon
so has part: feature:971677-971789:-1:exon
so has part: feature:971307-971457:-1:exon
so has part: feature:970050-971207:-1:exon

XP_020222630.1
type: Protein
SIO_000068: ncbiprotein

position:970050:-1
position: 970050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:973367:-1
position: 973367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:973242-973367:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:972375-972539:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:972053-972162:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:971867-971975:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:971677-971789:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:971307-971457:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:970050-971207:-1:exon

LOC109804730
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804730
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1039080..1049583
location: region:1039080-1049583:1
so has part: feature:1039080-1049583:1:exon
subclass of: SO_0000010

109804730
type: Gene
SIO_000068: ncbigene

position:1039080:1
position: 1039080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1049583:1
position: 1049583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1039080-1049583:1:exon

LOC109804730
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 3821
gene: LOC109804730
product: uncharacterized LOC109804730, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XR_002240247.2
SIO_010081: LOC109804730
so part of: LOC109804730
location: join(1039080..1039337,1040648..1040840,1040988..1041073,1041372..1041456,1043308..1043386,1043539..1043675,1043765..1043851,1044001..1044150,1044512..1044642,1045906..1046019,1049203..1049583)
location: region:1039080-1049583:1
so has part: feature:1039080-1039337:1:exon
so has part: feature:1040648-1040840:1:exon
so has part: feature:1040988-1041073:1:exon
so has part: feature:1041372-1041456:1:exon
so has part: feature:1043308-1043386:1:exon
so has part: feature:1043539-1043675:1:exon
so has part: feature:1043765-1043851:1:exon
so has part: feature:1044001-1044150:1:exon
so has part: feature:1044512-1044642:1:exon
so has part: feature:1045906-1046019:1:exon
so has part: feature:1049203-1049583:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1039080-1039337:1:exon

position:1039337:1
position: 1039337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1040648-1040840:1:exon

position:1040648:1
position: 1040648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1040840:1
position: 1040840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1040988-1041073:1:exon

position:1040988:1
position: 1040988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1041073:1
position: 1041073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1041372-1041456:1:exon

position:1041372:1
position: 1041372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1041456:1
position: 1041456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1043308-1043386:1:exon

position:1043308:1
position: 1043308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1043386:1
position: 1043386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1043539-1043675:1:exon

position:1043539:1
position: 1043539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1043675:1
position: 1043675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1043765-1043851:1:exon

position:1043765:1
position: 1043765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1043851:1
position: 1043851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1044001-1044150:1:exon

position:1044001:1
position: 1044001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1044150:1
position: 1044150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1044512-1044642:1:exon

position:1044512:1
position: 1044512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1044642:1
position: 1044642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1045906-1046019:1:exon

position:1045906:1
position: 1045906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1046019:1
position: 1046019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1049203-1049583:1:exon

position:1049203:1
position: 1049203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109804730
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804730
product: uncharacterized LOC109804730, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_020366563.1
SIO_010081: LOC109804730
subclass of: SO_0000673
so part of: LOC109804730
location: join(1039084..1039337,1040648..1040840,1040988..1041073,1041372..1041456,1043308..1043386,1043539..1043675,1043765..1043851,1044001..1044119,1044512..1044642,1045906..1046019,1049203..1049583)
location: region:1039084-1049583:1
so has part: feature:1039084-1039337:1:exon
so has part: feature:1040648-1040840:1:exon
so has part: feature:1040988-1041073:1:exon
so has part: feature:1041372-1041456:1:exon
so has part: feature:1043308-1043386:1:exon
so has part: feature:1043539-1043675:1:exon
so has part: feature:1043765-1043851:1:exon
so has part: feature:1044001-1044119:1:exon
so has part: feature:1044512-1044642:1:exon
so has part: feature:1045906-1046019:1:exon
so has part: feature:1049203-1049583:1:exon

position:1039084:1
position: 1039084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1039084-1039337:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1040648-1040840:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1040988-1041073:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1041372-1041456:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1043308-1043386:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1043539-1043675:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1043765-1043851:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1044001-1044119:1:exon

position:1044119:1
position: 1044119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1044512-1044642:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1045906-1046019:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1049203-1049583:1:exon

LOC109804730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804730
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109804730
translation: MMSPNRVSEDRGSPPHNFRHTPLQIIHIVANFMRIWSIYSMYRYFLQTGASVVLFLFACLAPASVLFLILQKPWKGRPLSNTQVVPSIINGGITALYLVLWGKGLKSCGPVRAILAEYSGAVLGVLSAVLYGRRSHMWKKIGGLIAMLASLYLLSEGWATATYSPFSWEDRDDSEAQIQTEPGLGLKQMLVPIIAGILSALRRVIARRVSIKNQLKRRLHALTIASATCFMFPIAMWDMIIGSPSESDSNQKLPFSAWAFLSTILFGNIVIFYADSIAEERLHMVFSSPRHLAAAGACIITMEIVYKMDFSLTGFMICCLILGFGIHEATSLERNRKDSIRNSDLSNGEFDNQIQMSPLPT
SIO_010081: LOC109804730
subclass of: SO_0000673
so part of: LOC109804730
location: join(1039282..1039337,1040648..1040840,1040988..1041073,1041372..1041456,1043308..1043386,1043539..1043675,1043765..1043851,1044001..1044119,1044512..1044642,1045906..1046018)
location: region:1039282-1046018:1
so has part: feature:1039282-1039337:1:exon
so has part: feature:1040648-1040840:1:exon
so has part: feature:1040988-1041073:1:exon
so has part: feature:1041372-1041456:1:exon
so has part: feature:1043308-1043386:1:exon
so has part: feature:1043539-1043675:1:exon
so has part: feature:1043765-1043851:1:exon
so has part: feature:1044001-1044119:1:exon
so has part: feature:1044512-1044642:1:exon
so has part: feature:1045906-1046018:1:exon

XP_020222152.1
type: Protein
SIO_000068: ncbiprotein

position:1039282:1
position: 1039282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1046018:1
position: 1046018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1039282-1039337:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1040648-1040840:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1040988-1041073:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1041372-1041456:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1043308-1043386:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1043539-1043675:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1043765-1043851:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1044001-1044119:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1044512-1044642:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1045906-1046018:1:exon

LOC109805216
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109805216
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1051102..1055070)
location: region:1051102-1055070:-1
so has part: feature:1051102-1055070:-1:exon
subclass of: SO_0000010

109805216
type: Gene
SIO_000068: ncbigene

position:1051102:-1
position: 1051102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1055070:-1
position: 1055070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1051102-1055070:-1:exon

LOC109805216
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805216
product: protein ABA DEFICIENT 4, chloroplastic
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_020367231.2
SIO_010081: LOC109805216
subclass of: SO_0000673
so part of: LOC109805216
location: complement(join(1051102..1051414,1051851..1051939,1052024..1052152,1052627..1052727,1053990..1054227,1054893..1055070))
location: region:1051102-1055070:-1
so has part: feature:1054893-1055070:-1:exon
so has part: feature:1053990-1054227:-1:exon
so has part: feature:1052627-1052727:-1:exon
so has part: feature:1052024-1052152:-1:exon
so has part: feature:1051851-1051939:-1:exon
so has part: feature:1051102-1051414:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1054893-1055070:-1:exon

position:1054893:-1
position: 1054893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1053990-1054227:-1:exon

position:1053990:-1
position: 1053990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1054227:-1
position: 1054227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1052627-1052727:-1:exon

position:1052627:-1
position: 1052627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1052727:-1
position: 1052727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1052024-1052152:-1:exon

position:1052024:-1
position: 1052024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1052152:-1
position: 1052152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1051851-1051939:-1:exon

position:1051851:-1
position: 1051851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1051939:-1
position: 1051939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1051102-1051414:-1:exon

position:1051414:-1
position: 1051414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109805216
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805216
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein ABA DEFICIENT 4, chloroplastic
translation: MAFSCHSPLALKIDHLGQTIKPCGTVKGQKFPFPIRSNGAELGHCNQSQLNQRSRVNFIRDWSFIGGSRVDVKPKPMRLVPFRKANRVYASWLTGSQLASSAFTLGTTAVLPFYTLMVLAPNSELTKKSMESSVPYVVLGVLYAYLLYLSWTPETVALIFASKYLLPELTSIGKMFSSEMTLASAWIHLLVIDLFAARHVFLDGQENQIETRHSVSMCLFFCPIGVLTHVITKAMTKSARKNKHSL
SIO_010081: LOC109805216
subclass of: SO_0000673
so part of: LOC109805216
location: complement(join(1051267..1051414,1051851..1051939,1052024..1052152,1052627..1052727,1053990..1054227,1054893..1054928))
location: region:1051267-1054928:-1
so has part: feature:1054893-1054928:-1:exon
so has part: feature:1053990-1054227:-1:exon
so has part: feature:1052627-1052727:-1:exon
so has part: feature:1052024-1052152:-1:exon
so has part: feature:1051851-1051939:-1:exon
so has part: feature:1051267-1051414:-1:exon

XP_020222820.1
type: Protein
SIO_000068: ncbiprotein

position:1051267:-1
position: 1051267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1054928:-1
position: 1054928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1054893-1054928:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1053990-1054227:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1052627-1052727:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1052024-1052152:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1051851-1051939:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1051267-1051414:-1:exon

LOC109804796
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804796
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1071618..1091425)
location: region:1071618-1091425:-1
so has part: feature:1071618-1091425:-1:exon
subclass of: SO_0000010

109804796
type: Gene
SIO_000068: ncbigene

position:1071618:-1
position: 1071618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1091425:-1
position: 1091425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1071618-1091425:-1:exon

LOC109804796
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804796
product: caffeoylshikimate esterase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_020366654.2
SIO_010081: LOC109804796
subclass of: SO_0000673
so part of: LOC109804796
location: complement(join(1071618..1072127,1073589..1073687,1073834..1073971,1074042..1074172,1075321..1075467,1075568..1075691,1075847..1075876,1077521..1077723,1077899..1078335))
location: region:1071618-1078335:-1
so has part: feature:1077899-1078335:-1:exon
so has part: feature:1077521-1077723:-1:exon
so has part: feature:1075847-1075876:-1:exon
so has part: feature:1075568-1075691:-1:exon
so has part: feature:1075321-1075467:-1:exon
so has part: feature:1074042-1074172:-1:exon
so has part: feature:1073834-1073971:-1:exon
so has part: feature:1073589-1073687:-1:exon
so has part: feature:1071618-1072127:-1:exon

position:1078335:-1
position: 1078335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1077899-1078335:-1:exon

position:1077899:-1
position: 1077899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1077521-1077723:-1:exon

position:1077521:-1
position: 1077521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1077723:-1
position: 1077723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1075847-1075876:-1:exon

position:1075847:-1
position: 1075847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1075876:-1
position: 1075876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1075568-1075691:-1:exon

position:1075568:-1
position: 1075568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1075691:-1
position: 1075691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1075321-1075467:-1:exon

position:1075321:-1
position: 1075321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1075467:-1
position: 1075467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1074042-1074172:-1:exon

position:1074042:-1
position: 1074042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1074172:-1
position: 1074172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1073834-1073971:-1:exon

position:1073834:-1
position: 1073834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1073971:-1
position: 1073971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1073589-1073687:-1:exon

position:1073589:-1
position: 1073589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1073687:-1
position: 1073687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1071618-1072127:-1:exon

position:1072127:-1
position: 1072127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109804796
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804796
product: caffeoylshikimate esterase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_020366655.2
SIO_010081: LOC109804796
subclass of: SO_0000673
so part of: LOC109804796
location: complement(join(1071725..1072127,1073589..1073687,1073834..1073971,1074042..1074172,1075321..1075467,1075568..1075691,1075847..1075876,1077521..1077723,1091368..1091425))
location: region:1071725-1091425:-1
so has part: feature:1091368-1091425:-1:exon
so has part: feature:1077521-1077723:-1:exon
so has part: feature:1075847-1075876:-1:exon
so has part: feature:1075568-1075691:-1:exon
so has part: feature:1075321-1075467:-1:exon
so has part: feature:1074042-1074172:-1:exon
so has part: feature:1073834-1073971:-1:exon
so has part: feature:1073589-1073687:-1:exon
so has part: feature:1071725-1072127:-1:exon

position:1071725:-1
position: 1071725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1091368-1091425:-1:exon

position:1091368:-1
position: 1091368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1077521-1077723:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1075847-1075876:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1075568-1075691:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1075321-1075467:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1074042-1074172:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1073834-1073971:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1073589-1073687:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1071725-1072127:-1:exon

LOC109804796
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804796
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caffeoylshikimate esterase isoform X1
translation: MIKSIFAQRPTKLYQCHPLNGFRAAFCVKRKRSKRRELKKVSSNMRIPGVSAELQKILSAKMDEVDARRRAREAFKDVQLGIDHILFKTPCEGIKMEESYEKNSKGIEIFHKSWLPLSRPKAAVFFCHGYGDTCTFFFEGIARMLASHGYAVFAMDYPGFGLSEGLHCYIPSFDGLVDTVIEQYTKIRENPPFHSLPSFLFGESMGGAVALKIHMKQPKAWDGAILVAPMCKIADDMVPPMVVTQILIGVASVFPKHKLVPQKDLAEAAFRDLKKREQTVYNVISYKDKPRLRTAVEMLRTTQEIDRRMKEVSLPLLILHGEADTVTDPSVSKTLYENASSSDKKLKLYKEAYHALLEGEPDEIITQVFGDIISWLDERKIKPNQSSTSFIF
SIO_010081: LOC109804796
subclass of: SO_0000673
so part of: LOC109804796
location: complement(join(1071882..1072127,1073589..1073687,1073834..1073971,1074042..1074172,1075321..1075467,1075568..1075691,1075847..1075876,1077521..1077723,1077899..1077959))
location: region:1071882-1077959:-1
so has part: feature:1077899-1077959:-1:exon
so has part: feature:1077521-1077723:-1:exon
so has part: feature:1075847-1075876:-1:exon
so has part: feature:1075568-1075691:-1:exon
so has part: feature:1075321-1075467:-1:exon
so has part: feature:1074042-1074172:-1:exon
so has part: feature:1073834-1073971:-1:exon
so has part: feature:1073589-1073687:-1:exon
so has part: feature:1071882-1072127:-1:exon

XP_020222243.1
type: Protein
SIO_000068: ncbiprotein

position:1071882:-1
position: 1071882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1077959:-1
position: 1077959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1077899-1077959:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1077521-1077723:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1075847-1075876:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1075568-1075691:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1075321-1075467:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1074042-1074172:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1073834-1073971:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1073589-1073687:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1071882-1072127:-1:exon

LOC109804796
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804796
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caffeoylshikimate esterase isoform X2
translation: MRIPGVSAELQKILSAKMDEVDARRRAREAFKDVQLGIDHILFKTPCEGIKMEESYEKNSKGIEIFHKSWLPLSRPKAAVFFCHGYGDTCTFFFEGIARMLASHGYAVFAMDYPGFGLSEGLHCYIPSFDGLVDTVIEQYTKIRENPPFHSLPSFLFGESMGGAVALKIHMKQPKAWDGAILVAPMCKIADDMVPPMVVTQILIGVASVFPKHKLVPQKDLAEAAFRDLKKREQTVYNVISYKDKPRLRTAVEMLRTTQEIDRRMKEVSLPLLILHGEADTVTDPSVSKTLYENASSSDKKLKLYKEAYHALLEGEPDEIITQVFGDIISWLDERKIKPNQSSTSFIF
SIO_010081: LOC109804796
subclass of: SO_0000673
so part of: LOC109804796
location: complement(join(1071882..1072127,1073589..1073687,1073834..1073971,1074042..1074172,1075321..1075467,1075568..1075691,1075847..1075876,1077521..1077652))
location: region:1071882-1077652:-1
so has part: feature:1077521-1077652:-1:exon
so has part: feature:1075847-1075876:-1:exon
so has part: feature:1075568-1075691:-1:exon
so has part: feature:1075321-1075467:-1:exon
so has part: feature:1074042-1074172:-1:exon
so has part: feature:1073834-1073971:-1:exon
so has part: feature:1073589-1073687:-1:exon
so has part: feature:1071882-1072127:-1:exon

XP_020222244.1
type: Protein
SIO_000068: ncbiprotein

position:1077652:-1
position: 1077652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1077521-1077652:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1075847-1075876:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1075568-1075691:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1075321-1075467:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1074042-1074172:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1073834-1073971:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1073589-1073687:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1071882-1072127:-1:exon

LOC109805113
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109805113
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1107323..1109561
location: region:1107323-1109561:1
so has part: feature:1107323-1109561:1:exon
subclass of: SO_0000010

109805113
type: Gene
SIO_000068: ncbigene

position:1107323:1
position: 1107323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1109561:1
position: 1109561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1107323-1109561:1:exon

LOC109805113
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805113
product: 60S ribosomal protein L36-3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_020367090.2
SIO_010081: LOC109805113
subclass of: SO_0000673
so part of: LOC109805113
location: join(1107323..1107477,1107621..1107726,1108938..1109137,1109258..1109561)
location: region:1107323-1109561:1
so has part: feature:1107323-1107477:1:exon
so has part: feature:1107621-1107726:1:exon
so has part: feature:1108938-1109137:1:exon
so has part: feature:1109258-1109561:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1107323-1107477:1:exon

position:1107477:1
position: 1107477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1107621-1107726:1:exon

position:1107621:1
position: 1107621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1107726:1
position: 1107726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1108938-1109137:1:exon

position:1108938:1
position: 1108938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1109137:1
position: 1109137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1109258-1109561:1:exon

position:1109258:1
position: 1109258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109805113
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805113
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L36-3
translation: MAPKQPSTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGAGDKKK
SIO_010081: LOC109805113
subclass of: SO_0000673
so part of: LOC109805113
location: join(1107625..1107726,1108938..1109137,1109258..1109288)
location: region:1107625-1109288:1
so has part: feature:1107625-1107726:1:exon
so has part: feature:1108938-1109137:1:exon
so has part: feature:1109258-1109288:1:exon

XP_020222679.1
type: Protein
SIO_000068: ncbiprotein

position:1107625:1
position: 1107625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1109288:1
position: 1109288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1107625-1107726:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1108938-1109137:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1109258-1109288:1:exon

LOC109804783
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804783
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1150253..1150995
location: region:1150253-1150995:1
so has part: feature:1150253-1150995:1:exon
subclass of: SO_0000011

109804783
type: Gene
SIO_000068: ncbigene

position:1150253:1
position: 1150253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1150995:1
position: 1150995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1150253-1150995:1:exon

LOC109804783
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3821
nc RNA class: lncRNA
gene: LOC109804783
product: uncharacterized LOC109804783
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XR_002240252.2
SIO_010081: LOC109804783
subclass of: SO_0000673
so part of: LOC109804783
location: join(1150253..1150318,1150541..1150627,1150891..1150995)
location: region:1150253-1150995:1
so has part: feature:1150253-1150318:1:exon
so has part: feature:1150541-1150627:1:exon
so has part: feature:1150891-1150995:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1150253-1150318:1:exon

position:1150318:1
position: 1150318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1150541-1150627:1:exon

position:1150541:1
position: 1150541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1150627:1
position: 1150627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1150891-1150995:1:exon

position:1150891:1
position: 1150891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109804978
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804978
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1194607..1196912
location: region:1194607-1196912:1
so has part: feature:1194607-1196912:1:exon
subclass of: SO_0000010

109804978
type: Gene
SIO_000068: ncbigene

position:1194607:1
position: 1194607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1196912:1
position: 1196912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1194607-1196912:1:exon

LOC109804978
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804978
product: uncharacterized LOC109804978
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_020366905.2
SIO_010081: LOC109804978
subclass of: SO_0000673
so part of: LOC109804978
location: join(1194607..1194716,1195424..1195617,1195721..1195784,1196256..1196912)
location: region:1194607-1196912:1
so has part: feature:1194607-1194716:1:exon
so has part: feature:1195424-1195617:1:exon
so has part: feature:1195721-1195784:1:exon
so has part: feature:1196256-1196912:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1194607-1194716:1:exon

position:1194716:1
position: 1194716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1195424-1195617:1:exon

position:1195424:1
position: 1195424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1195617:1
position: 1195617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1195721-1195784:1:exon

position:1195721:1
position: 1195721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1195784:1
position: 1195784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1196256-1196912:1:exon

position:1196256:1
position: 1196256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109804978
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804978
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109804978
translation: MNCYGLQQNAFAACEEMRSSVNFVDQKEPVICPKPRRVGVVSNMPVRHLRWHFNQQAEGSDSKAGAELLEIMFKKESQGEEFANQVASSPPYFCGSPPVRAANPLVQDARFGDEKHCPASPSGLLSPSSASRKGGCVRMSFGLKPAAVRVEGFDCLNRDRQNSRIPAVA
SIO_010081: LOC109804978
subclass of: SO_0000673
so part of: LOC109804978
location: join(1195457..1195617,1195721..1195784,1196256..1196540)
location: region:1195457-1196540:1
so has part: feature:1195457-1195617:1:exon
so has part: feature:1195721-1195784:1:exon
so has part: feature:1196256-1196540:1:exon

XP_020222494.1
type: Protein
SIO_000068: ncbiprotein

position:1195457:1
position: 1195457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1196540:1
position: 1196540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1195457-1195617:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1195721-1195784:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1196256-1196540:1:exon

LOC114916300
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC114916300
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1212902..1215575)
location: region:1212902-1215575:-1
so has part: feature:1212902-1215575:-1:exon

114916300
type: Gene
SIO_000068: ncbigene

position:1212902:-1
position: 1212902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1215575:-1
position: 1215575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1212902-1215575:-1:exon

LOC114916300
type: Exon
subclass of: SO_0000147
RO_0002162: 3821
gene: LOC114916300
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 64% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC114916300
subclass of: SO_0000673
so part of: LOC114916300
location: complement(1212902..1213645)
location: region:1212902-1213645:-1
so has part: feature:1212902-1213645:-1:exon

position:1213645:-1
position: 1213645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1212902-1213645:-1:exon

LOC114916300
type: Exon
subclass of: SO_0000147
RO_0002162: 3821
gene: LOC114916300
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 64% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC114916300
subclass of: SO_0000673
so part of: LOC114916300
location: complement(1213743..1213843)
location: region:1213743-1213843:-1
so has part: feature:1213743-1213843:-1:exon

position:1213743:-1
position: 1213743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1213843:-1
position: 1213843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1213743-1213843:-1:exon

LOC114916300
type: Exon
subclass of: SO_0000147
RO_0002162: 3821
gene: LOC114916300
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 64% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC114916300
subclass of: SO_0000673
so part of: LOC114916300
location: complement(1213946..1214035)
location: region:1213946-1214035:-1
so has part: feature:1213946-1214035:-1:exon

position:1213946:-1
position: 1213946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1214035:-1
position: 1214035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1213946-1214035:-1:exon

LOC114916300
type: Exon
subclass of: SO_0000147
RO_0002162: 3821
gene: LOC114916300
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 64% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC114916300
subclass of: SO_0000673
so part of: LOC114916300
location: complement(1214355..1214518)
location: region:1214355-1214518:-1
so has part: feature:1214355-1214518:-1:exon

position:1214355:-1
position: 1214355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1214518:-1
position: 1214518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1214355-1214518:-1:exon

LOC114916300
type: Exon
subclass of: SO_0000147
RO_0002162: 3821
gene: LOC114916300
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 64% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC114916300
subclass of: SO_0000673
so part of: LOC114916300
location: complement(1214902..1215000)
location: region:1214902-1215000:-1
so has part: feature:1214902-1215000:-1:exon

position:1214902:-1
position: 1214902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1215000:-1
position: 1215000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1214902-1215000:-1:exon

LOC114916300
type: Exon
subclass of: SO_0000147
RO_0002162: 3821
gene: LOC114916300
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 64% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC114916300
subclass of: SO_0000673
so part of: LOC114916300
location: complement(1215572..1215575)
location: region:1215572-1215575:-1
so has part: feature:1215572-1215575:-1:exon

position:1215572:-1
position: 1215572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1215572-1215575:-1:exon

LOC114916310
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC114916310
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1223773..1225270
location: region:1223773-1225270:1
so has part: feature:1223773-1225270:1:exon
subclass of: SO_0000011

114916310
type: Gene
SIO_000068: ncbigene

position:1223773:1
position: 1223773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1225270:1
position: 1225270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1223773-1225270:1:exon

LOC114916310
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3821
nc RNA class: lncRNA
gene: LOC114916310
product: uncharacterized LOC114916310
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XR_003804712.1
SIO_010081: LOC114916310
subclass of: SO_0000673
so part of: LOC114916310
location: join(1223773..1223924,1225188..1225270)
location: region:1223773-1225270:1
so has part: feature:1223773-1223924:1:exon
so has part: feature:1225188-1225270:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1223773-1223924:1:exon

position:1223924:1
position: 1223924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1225188-1225270:1:exon

position:1225188:1
position: 1225188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109804927
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804927
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1231052..1231961
location: region:1231052-1231961:1
so has part: feature:1231052-1231961:1:exon
subclass of: SO_0000010

109804927
type: Gene
SIO_000068: ncbigene

position:1231052:1
position: 1231052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1231961:1
position: 1231961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1231052-1231961:1:exon

LOC109804927
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804927
product: uncharacterized LOC109804927
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_020366852.1
SIO_010081: LOC109804927
subclass of: SO_0000673
so part of: LOC109804927
location: join(1231052..1231349,1231428..1231549,1231619..1231720,1231794..1231865,1231941..1231961)
location: region:1231052-1231961:1
so has part: feature:1231052-1231349:1:exon
so has part: feature:1231428-1231549:1:exon
so has part: feature:1231619-1231720:1:exon
so has part: feature:1231794-1231865:1:exon
so has part: feature:1231941-1231961:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1231052-1231349:1:exon

position:1231349:1
position: 1231349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1231428-1231549:1:exon

position:1231428:1
position: 1231428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1231549:1
position: 1231549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1231619-1231720:1:exon

position:1231619:1
position: 1231619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1231720:1
position: 1231720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1231794-1231865:1:exon

position:1231794:1
position: 1231794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1231865:1
position: 1231865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1231941-1231961:1:exon

position:1231941:1
position: 1231941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109804927
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804927
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109804927
translation: MGSAMEAKQAEEAREQEPLSPLSPPTPKLGDDNDEETSSTRDIGRVIPGPAGLVQATMRNRESENPLPTQQFLYDLNGPAMLVFNSNPWCYAVHYVKSRSLPEVTTLININHNLERVPTVVAFVESMTPTGKGNYTINLKDPTATIGASLHYKVKQHQQYGEDIVVRCVLILKQVVVFAPKRFRGPYLLNITKINVKRVIPKDI
SIO_010081: LOC109804927
subclass of: SO_0000673
so part of: LOC109804927
location: join(1231052..1231349,1231428..1231549,1231619..1231720,1231794..1231865,1231941..1231961)
location: region:1231052-1231961:1
so has part: feature:1231052-1231349:1:exon
so has part: feature:1231428-1231549:1:exon
so has part: feature:1231619-1231720:1:exon
so has part: feature:1231794-1231865:1:exon
so has part: feature:1231941-1231961:1:exon

XP_020222441.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1231052-1231349:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1231428-1231549:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1231619-1231720:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1231794-1231865:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1231941-1231961:1:exon

LOC114916292
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC114916292
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1233270..1234479)
location: region:1233270-1234479:-1
so has part: feature:1233270-1234479:-1:exon
subclass of: SO_0000011

114916292
type: Gene
SIO_000068: ncbigene

position:1233270:-1
position: 1233270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1234479:-1
position: 1234479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1233270-1234479:-1:exon

LOC114916292
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3821
nc RNA class: lncRNA
gene: LOC114916292
product: uncharacterized LOC114916292
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003804677.1
SIO_010081: LOC114916292
subclass of: SO_0000673
so part of: LOC114916292
location: complement(join(1233270..1233800,1233892..1234292,1234392..1234479))
location: region:1233270-1234479:-1
so has part: feature:1234392-1234479:-1:exon
so has part: feature:1233892-1234292:-1:exon
so has part: feature:1233270-1233800:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1234392-1234479:-1:exon

position:1234392:-1
position: 1234392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1233892-1234292:-1:exon

position:1233892:-1
position: 1233892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1234292:-1
position: 1234292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1233270-1233800:-1:exon

position:1233800:-1
position: 1233800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC114916301
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC114916301
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1234697..1235403)
location: region:1234697-1235403:-1
so has part: feature:1234697-1235403:-1:exon
subclass of: SO_0000010

114916301
type: Gene
SIO_000068: ncbigene

position:1234697:-1
position: 1234697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1235403:-1
position: 1235403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1234697-1235403:-1:exon

LOC114916301
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC114916301
product: protein MAIN-LIKE 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_029272700.1
SIO_010081: LOC114916301
subclass of: SO_0000673
so part of: LOC114916301
location: complement(join(1234697..1234801,1234918..1235403))
location: region:1234697-1235403:-1
so has part: feature:1234918-1235403:-1:exon
so has part: feature:1234697-1234801:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1234918-1235403:-1:exon

position:1234918:-1
position: 1234918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1234697-1234801:-1:exon

position:1234801:-1
position: 1234801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC114916301
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC114916301
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein MAIN-LIKE 2-like
translation: MSIQMIHAGPIDDSLLRLQPFHISEHIWNGAEDRVFKVRRATQSELRGVEIPAAIQDLLQRDGFMGMAHISYFSVDNHLISALVERWRPETHMFHMPFGECTITLEDVAMLLGLKISGAPITGYVTMDWGALVQRLLGMTPPESMLAGGRLRMSWIDRHFSNIPEFPRRPGCLWSNESGIMRPGEYVQGVVRGHEL
SIO_010081: LOC114916301
subclass of: SO_0000673
so part of: LOC114916301
location: complement(join(1234697..1234801,1234918..1235403))
location: region:1234697-1235403:-1
so has part: feature:1234918-1235403:-1:exon
so has part: feature:1234697-1234801:-1:exon

XP_029128533.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1234918-1235403:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1234697-1234801:-1:exon

LOC109804839
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804839
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1238058..1239398)
location: region:1238058-1239398:-1
so has part: feature:1238058-1239398:-1:exon
subclass of: SO_0000010

109804839
type: Gene
SIO_000068: ncbigene

position:1238058:-1
position: 1238058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1239398:-1
position: 1239398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1238058-1239398:-1:exon

LOC109804839
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804839
product: ribulose bisphosphate carboxylase small chain 1, chloroplastic
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 148 ESTs, 43 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_020366718.2
SIO_010081: LOC109804839
subclass of: SO_0000673
so part of: LOC109804839
location: complement(join(1238058..1238484,1238871..1239005,1239169..1239398))
location: region:1238058-1239398:-1
so has part: feature:1239169-1239398:-1:exon
so has part: feature:1238871-1239005:-1:exon
so has part: feature:1238058-1238484:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1239169-1239398:-1:exon

position:1239169:-1
position: 1239169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1238871-1239005:-1:exon

position:1238871:-1
position: 1238871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1239005:-1
position: 1239005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1238058-1238484:-1:exon

position:1238484:-1
position: 1238484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109804839
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804839
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribulose bisphosphate carboxylase small chain 1, chloroplastic
translation: MASSMISSPAVTTVNRADAGMVAPFTGLKSLAGFPTRKTNNDITTIANNGGRVQCMQVWPPLGKKKFETLSYLPPLSDAELGKEVDYLLRKGWIPCLEFELEHGWVYREHHKSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVQEAKKEYPNSFIRIIGFDNVRQVQCISFIAYKPPGV
SIO_010081: LOC109804839
subclass of: SO_0000673
so part of: LOC109804839
location: complement(join(1238254..1238484,1238871..1239005,1239169..1239339))
location: region:1238254-1239339:-1
so has part: feature:1239169-1239339:-1:exon
so has part: feature:1238871-1239005:-1:exon
so has part: feature:1238254-1238484:-1:exon

XP_020222307.1
type: Protein
SIO_000068: ncbiprotein

position:1238254:-1
position: 1238254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1239339:-1
position: 1239339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1239169-1239339:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1238871-1239005:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1238254-1238484:-1:exon

LOC109805063
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109805063
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1271920..1280405
location: region:1271920-1280405:1
so has part: feature:1271920-1280405:1:exon
subclass of: SO_0000010

109805063
type: Gene
SIO_000068: ncbigene

position:1271920:1
position: 1271920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1280405:1
position: 1280405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1271920-1280405:1:exon

LOC109805063
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805063
product: putative GPI-anchor transamidase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_020367013.2
SIO_010081: LOC109805063
subclass of: SO_0000673
so part of: LOC109805063
location: join(1271920..1272138,1272265..1272515,1272809..1272850,1272937..1273081,1274637..1274866,1275180..1275237,1275982..1276059,1276196..1276284,1276718..1276799,1279559..1279750,1279838..1280405)
location: region:1271920-1280405:1
so has part: feature:1271920-1272138:1:exon
so has part: feature:1272265-1272515:1:exon
so has part: feature:1272809-1272850:1:exon
so has part: feature:1272937-1273081:1:exon
so has part: feature:1274637-1274866:1:exon
so has part: feature:1275180-1275237:1:exon
so has part: feature:1275982-1276059:1:exon
so has part: feature:1276196-1276284:1:exon
so has part: feature:1276718-1276799:1:exon
so has part: feature:1279559-1279750:1:exon
so has part: feature:1279838-1280405:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1271920-1272138:1:exon

position:1272138:1
position: 1272138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1272265-1272515:1:exon

position:1272265:1
position: 1272265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1272515:1
position: 1272515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1272809-1272850:1:exon

position:1272809:1
position: 1272809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1272850:1
position: 1272850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1272937-1273081:1:exon

position:1272937:1
position: 1272937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1273081:1
position: 1273081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1274637-1274866:1:exon

position:1274637:1
position: 1274637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1274866:1
position: 1274866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1275180-1275237:1:exon

position:1275180:1
position: 1275180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1275237:1
position: 1275237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1275982-1276059:1:exon

position:1275982:1
position: 1275982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1276059:1
position: 1276059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1276196-1276284:1:exon

position:1276196:1
position: 1276196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1276284:1
position: 1276284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1276718-1276799:1:exon

position:1276718:1
position: 1276718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1276799:1
position: 1276799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1279559-1279750:1:exon

position:1279559:1
position: 1279559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1279750:1
position: 1279750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1279838-1280405:1:exon

position:1279838:1
position: 1279838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109805063
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805063
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative GPI-anchor transamidase
translation: MGLSVSMLPMKVVLLMLLIFLCYSVAYSSSSSETTMHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGIPDERIILMLADDMACNARNKYPAQVFNNENHRLNLYGDNVEVDYRGYEVTVENFLRVLTGRHETAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKEKCRFKELLIMVDTCQASTLFSQFHSPGVLAIGSSMKGENSYSHHLDSDVGVSVVDRFTFYTLAFFERLNMYDNASLSSLFNSYNPNLLMSTAYYRMDLYQRHLEEVPVTNFFGSVMKTIYTDSAYRSWSNKKIRAAKSKMPLDQSIFDSDGRVLRKSDEEDQFNNLTAEDYIRDSVGQIWSAILSNVNTFESTDTFVCYGLVLMLPLLIFSTWLSSK
SIO_010081: LOC109805063
subclass of: SO_0000673
so part of: LOC109805063
location: join(1272364..1272515,1272809..1272850,1272937..1273081,1274637..1274866,1275180..1275237,1275982..1276059,1276196..1276284,1276718..1276799,1279559..1279750,1279838..1279984)
location: region:1272364-1279984:1
so has part: feature:1272364-1272515:1:exon
so has part: feature:1272809-1272850:1:exon
so has part: feature:1272937-1273081:1:exon
so has part: feature:1274637-1274866:1:exon
so has part: feature:1275180-1275237:1:exon
so has part: feature:1275982-1276059:1:exon
so has part: feature:1276196-1276284:1:exon
so has part: feature:1276718-1276799:1:exon
so has part: feature:1279559-1279750:1:exon
so has part: feature:1279838-1279984:1:exon

XP_020222602.1
type: Protein
SIO_000068: ncbiprotein

position:1272364:1
position: 1272364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1279984:1
position: 1279984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1272364-1272515:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1272809-1272850:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1272937-1273081:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1274637-1274866:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1275180-1275237:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1275982-1276059:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1276196-1276284:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1276718-1276799:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1279559-1279750:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1279838-1279984:1:exon

LOC109804929
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804929
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1338035..1338694)
location: region:1338035-1338694:-1
so has part: feature:1338035-1338694:-1:exon
subclass of: SO_0000010

109804929
type: Gene
SIO_000068: ncbigene

position:1338035:-1
position: 1338035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1338694:-1
position: 1338694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1338035-1338694:-1:exon

LOC109804929
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804929
product: E3 ubiquitin-protein ligase RNF181
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_020366856.1
SIO_010081: LOC109804929
subclass of: SO_0000673
so part of: LOC109804929
location: complement(1338035..1338694)
location: region:1338035-1338694:-1
so has part: feature:1338035-1338694:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1338035-1338694:-1:exon

LOC109804929
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804929
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF181
translation: MESEHYHYGVQSFNAEDTTLMAGDTFNFSVRVSSYSMDSHAERLLYQSPSQCIPCHSFFHEGQHLLRTLLSPLHLSNETLGEITQGAIALVQEMFQVDREVVLPPPPLESQHREISLCLEILRIDDDDDGDDVGAVLEESMQCFRMVPASNEAIKTSLKKSTVMVEGEGCSICLEEMDVNDECYTMPCHHGFHPQCIVTWLKTSHMCPLCRFPLPTLKN
SIO_010081: LOC109804929
subclass of: SO_0000673
so part of: LOC109804929
location: complement(1338035..1338694)
location: region:1338035-1338694:-1
so has part: feature:1338035-1338694:-1:exon

XP_020222445.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1338035-1338694:-1:exon

LOC109804968
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804968
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1368959..1375946)
location: region:1368959-1375946:-1
so has part: feature:1368959-1375946:-1:exon
subclass of: SO_0000011

109804968
type: Gene
SIO_000068: ncbigene

position:1368959:-1
position: 1368959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1375946:-1
position: 1375946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1368959-1375946:-1:exon

LOC109804968
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3821
nc RNA class: lncRNA
gene: LOC109804968
product: uncharacterized LOC109804968, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_003804704.1
SIO_010081: LOC109804968
subclass of: SO_0000673
so part of: LOC109804968
location: complement(join(1368959..1369060,1371122..1371174,1371482..1371712,1372103..1372400,1373067..1375946))
location: region:1368959-1375946:-1
so has part: feature:1373067-1375946:-1:exon
so has part: feature:1372103-1372400:-1:exon
so has part: feature:1371482-1371712:-1:exon
so has part: feature:1371122-1371174:-1:exon
so has part: feature:1368959-1369060:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1373067-1375946:-1:exon

position:1373067:-1
position: 1373067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1372103-1372400:-1:exon

position:1372103:-1
position: 1372103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1372400:-1
position: 1372400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1371482-1371712:-1:exon

position:1371482:-1
position: 1371482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1371712:-1
position: 1371712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1371122-1371174:-1:exon

position:1371122:-1
position: 1371122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1371174:-1
position: 1371174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1368959-1369060:-1:exon

position:1369060:-1
position: 1369060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109804968
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3821
nc RNA class: lncRNA
gene: LOC109804968
product: uncharacterized LOC109804968, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_003804705.1
SIO_010081: LOC109804968
subclass of: SO_0000673
so part of: LOC109804968
location: complement(join(1368959..1369060,1371122..1371174,1371482..1371712,1372103..1372417,1373067..1375946))
location: region:1368959-1375946:-1
so has part: feature:1373067-1375946:-1:exon
so has part: feature:1372103-1372417:-1:exon
so has part: feature:1371482-1371712:-1:exon
so has part: feature:1371122-1371174:-1:exon
so has part: feature:1368959-1369060:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1373067-1375946:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1372103-1372417:-1:exon

position:1372417:-1
position: 1372417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1371482-1371712:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1371122-1371174:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1368959-1369060:-1:exon

LOC109804930
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804930
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1379504..1380178)
location: region:1379504-1380178:-1
so has part: feature:1379504-1380178:-1:exon
subclass of: SO_0000010

109804930
type: Gene
SIO_000068: ncbigene

position:1379504:-1
position: 1379504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1380178:-1
position: 1380178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1379504-1380178:-1:exon

LOC109804930
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804930
product: E3 ubiquitin-protein ligase DMA2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_020366857.1
SIO_010081: LOC109804930
subclass of: SO_0000673
so part of: LOC109804930
location: complement(1379504..1380178)
location: region:1379504-1380178:-1
so has part: feature:1379504-1380178:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1379504-1380178:-1:exon

LOC109804930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804930
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase DMA2
translation: MDSQHYHSEHYHYRVSRLNEEHTTPMAGDSFKFSIRVSSYSMDADMMNTGTERLLYYSPSQCIPCHHFFQEGQHFLSTLLSRIHFSINDSLEELARGVMSAVQDFFQVDQVASPSPSFQSQHREIPLRLEILQLYDGISAAMEESMQCFKMIPASNEAIQTLLKKSTVVMGSEGCPICLEELDVNAECCTMPCHHVFHLQCIVTWLKTSHVCPLCRYPLPTLKN
SIO_010081: LOC109804930
subclass of: SO_0000673
so part of: LOC109804930
location: complement(1379504..1380178)
location: region:1379504-1380178:-1
so has part: feature:1379504-1380178:-1:exon

XP_020222446.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1379504-1380178:-1:exon

LOC109804931
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804931
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1387684..1388358)
location: region:1387684-1388358:-1
so has part: feature:1387684-1388358:-1:exon
subclass of: SO_0000010

109804931
type: Gene
SIO_000068: ncbigene

position:1387684:-1
position: 1387684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1388358:-1
position: 1388358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1387684-1388358:-1:exon

LOC109804931
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804931
product: E3 ubiquitin-protein ligase DMA2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_020366858.1
SIO_010081: LOC109804931
subclass of: SO_0000673
so part of: LOC109804931
location: complement(1387684..1388358)
location: region:1387684-1388358:-1
so has part: feature:1387684-1388358:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1387684-1388358:-1:exon

LOC109804931
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804931
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase DMA2-like
translation: MESQHYHSEHYHYRVSRLNEEHTTPMAGDSFKFSIRVSSYSMDADMMNTGTERLLYYSPSQCIPCHHFFQEGQHFLSTLLSRIHFSINDSLEELARGVMSAVQDFFQVDQVASPSPSFQSQHREIPLRLEILQLYDGISAAMEESMQCFKMIPASNEAIQTLLKKSTVVMGSEGCPICLEELDVNAECCTMPCHHVFHLQCIVTWLKTSHVCPLCRYPLPTLKN
SIO_010081: LOC109804931
subclass of: SO_0000673
so part of: LOC109804931
location: complement(1387684..1388358)
location: region:1387684-1388358:-1
so has part: feature:1387684-1388358:-1:exon

XP_020222447.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1387684-1388358:-1:exon

LOC109805083
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109805083
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1418927..1430774)
location: region:1418927-1430774:-1
so has part: feature:1418927-1430774:-1:exon
subclass of: SO_0000010

109805083
type: Gene
SIO_000068: ncbigene

position:1418927:-1
position: 1418927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1430774:-1
position: 1430774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1418927-1430774:-1:exon

LOC109805083
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805083
product: stomatal closure-related actin-binding protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_020367032.2
SIO_010081: LOC109805083
subclass of: SO_0000673
so part of: LOC109805083
location: complement(join(1418927..1419329,1419901..1420050,1420619..1420750,1421910..1421968,1422142..1422258,1424118..1424298,1424750..1424833,1425588..1425656,1426775..1426915,1427990..1428082,1429517..1429645,1429847..1430146,1430523..1430774))
location: region:1418927-1430774:-1
so has part: feature:1430523-1430774:-1:exon
so has part: feature:1429847-1430146:-1:exon
so has part: feature:1429517-1429645:-1:exon
so has part: feature:1427990-1428082:-1:exon
so has part: feature:1426775-1426915:-1:exon
so has part: feature:1425588-1425656:-1:exon
so has part: feature:1424750-1424833:-1:exon
so has part: feature:1424118-1424298:-1:exon
so has part: feature:1422142-1422258:-1:exon
so has part: feature:1421910-1421968:-1:exon
so has part: feature:1420619-1420750:-1:exon
so has part: feature:1419901-1420050:-1:exon
so has part: feature:1418927-1419329:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1430523-1430774:-1:exon

position:1430523:-1
position: 1430523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1429847-1430146:-1:exon

position:1429847:-1
position: 1429847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1430146:-1
position: 1430146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1429517-1429645:-1:exon

position:1429517:-1
position: 1429517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1429645:-1
position: 1429645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1427990-1428082:-1:exon

position:1427990:-1
position: 1427990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1428082:-1
position: 1428082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1426775-1426915:-1:exon

position:1426775:-1
position: 1426775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1426915:-1
position: 1426915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1425588-1425656:-1:exon

position:1425588:-1
position: 1425588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1425656:-1
position: 1425656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1424750-1424833:-1:exon

position:1424750:-1
position: 1424750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1424833:-1
position: 1424833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1424118-1424298:-1:exon

position:1424118:-1
position: 1424118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1424298:-1
position: 1424298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1422142-1422258:-1:exon

position:1422142:-1
position: 1422142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1422258:-1
position: 1422258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1421910-1421968:-1:exon

position:1421910:-1
position: 1421910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1421968:-1
position: 1421968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1420619-1420750:-1:exon

position:1420619:-1
position: 1420619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1420750:-1
position: 1420750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1419901-1420050:-1:exon

position:1419901:-1
position: 1419901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1420050:-1
position: 1420050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1418927-1419329:-1:exon

position:1419329:-1
position: 1419329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109805083
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805083
product: stomatal closure-related actin-binding protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_020367033.2
SIO_010081: LOC109805083
subclass of: SO_0000673
so part of: LOC109805083
location: complement(join(1418927..1419329,1419901..1420050,1420619..1420750,1421910..1421968,1422142..1422258,1424118..1424298,1424750..1424833,1425588..1425656,1426775..1426915,1427990..1428082,1429517..1429645,1429847..1430146,1430354..1430468))
location: region:1418927-1430468:-1
so has part: feature:1430354-1430468:-1:exon
so has part: feature:1429847-1430146:-1:exon
so has part: feature:1429517-1429645:-1:exon
so has part: feature:1427990-1428082:-1:exon
so has part: feature:1426775-1426915:-1:exon
so has part: feature:1425588-1425656:-1:exon
so has part: feature:1424750-1424833:-1:exon
so has part: feature:1424118-1424298:-1:exon
so has part: feature:1422142-1422258:-1:exon
so has part: feature:1421910-1421968:-1:exon
so has part: feature:1420619-1420750:-1:exon
so has part: feature:1419901-1420050:-1:exon
so has part: feature:1418927-1419329:-1:exon

position:1430468:-1
position: 1430468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1430354-1430468:-1:exon

position:1430354:-1
position: 1430354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1429847-1430146:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1429517-1429645:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1427990-1428082:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1426775-1426915:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1425588-1425656:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1424750-1424833:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1424118-1424298:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1422142-1422258:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1421910-1421968:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1420619-1420750:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1419901-1420050:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1418927-1419329:-1:exon

LOC109805083
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805083
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: stomatal closure-related actin-binding protein 1
translation: MTRMTRDFGDTMQKDAVPAVSADVIFASLRFPNYKIGANNQIMETKDDPKVLSMKEVVARETAQLLEQQKRLSVRDLASKFEKGLAAAAKLSEEARLREAASLEKHVLLKKLRDALQSLKGRVAGRNKDDVAEAIAMVEALAVQLTQREGELIQEKAEVKKLTNFLKQASEDAKKLVNEERAFARFEIENARAAVQRVEEALQEHESMSRVSGKQDLEQLMKEVQEARRIKMLHQPSKVMDMEHELRALRVQLAEKSRLYLRLQKEIARTKKGEENAPHLYELEGTETLGSYLQIQPCSDHAPELSTCSIQWYRVSTDSAKKEFISGATKSVFAPEPFDVGRMLQVDIISEGQKVTLSTTGPIDPAAGLGTYVEALVRKHDTEFNVVVTQTGSDNPIESIHVLHIGKMRMKLCKGKTTITKEYYSSSMQLCGVRGGGNAAAQAVFWQPKQGLSFVLAFESERERNAAIMLARRFAFDCNIILAGPDHKAPLET
SIO_010081: LOC109805083
subclass of: SO_0000673
so part of: LOC109805083
location: complement(join(1419285..1419329,1419901..1420050,1420619..1420750,1421910..1421968,1422142..1422258,1424118..1424298,1424750..1424833,1425588..1425656,1426775..1426915,1427990..1428082,1429517..1429645,1429847..1430128))
location: region:1419285-1430128:-1
so has part: feature:1429847-1430128:-1:exon
so has part: feature:1429517-1429645:-1:exon
so has part: feature:1427990-1428082:-1:exon
so has part: feature:1426775-1426915:-1:exon
so has part: feature:1425588-1425656:-1:exon
so has part: feature:1424750-1424833:-1:exon
so has part: feature:1424118-1424298:-1:exon
so has part: feature:1422142-1422258:-1:exon
so has part: feature:1421910-1421968:-1:exon
so has part: feature:1420619-1420750:-1:exon
so has part: feature:1419901-1420050:-1:exon
so has part: feature:1419285-1419329:-1:exon

XP_020222621.1
type: Protein
SIO_000068: ncbiprotein

position:1419285:-1
position: 1419285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1430128:-1
position: 1430128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1429847-1430128:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1429517-1429645:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1427990-1428082:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1426775-1426915:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1425588-1425656:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1424750-1424833:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1424118-1424298:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1422142-1422258:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1421910-1421968:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1420619-1420750:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1419901-1420050:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1419285-1419329:-1:exon

LOC109805083
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805083
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: stomatal closure-related actin-binding protein 1
translation: MTRMTRDFGDTMQKDAVPAVSADVIFASLRFPNYKIGANNQIMETKDDPKVLSMKEVVARETAQLLEQQKRLSVRDLASKFEKGLAAAAKLSEEARLREAASLEKHVLLKKLRDALQSLKGRVAGRNKDDVAEAIAMVEALAVQLTQREGELIQEKAEVKKLTNFLKQASEDAKKLVNEERAFARFEIENARAAVQRVEEALQEHESMSRVSGKQDLEQLMKEVQEARRIKMLHQPSKVMDMEHELRALRVQLAEKSRLYLRLQKEIARTKKGEENAPHLYELEGTETLGSYLQIQPCSDHAPELSTCSIQWYRVSTDSAKKEFISGATKSVFAPEPFDVGRMLQVDIISEGQKVTLSTTGPIDPAAGLGTYVEALVRKHDTEFNVVVTQTGSDNPIESIHVLHIGKMRMKLCKGKTTITKEYYSSSMQLCGVRGGGNAAAQAVFWQPKQGLSFVLAFESERERNAAIMLARRFAFDCNIILAGPDHKAPLET
SIO_010081: LOC109805083
subclass of: SO_0000673
so part of: LOC109805083
location: complement(join(1419285..1419329,1419901..1420050,1420619..1420750,1421910..1421968,1422142..1422258,1424118..1424298,1424750..1424833,1425588..1425656,1426775..1426915,1427990..1428082,1429517..1429645,1429847..1430128))
location: region:1419285-1430128:-1
so has part: feature:1429847-1430128:-1:exon
so has part: feature:1429517-1429645:-1:exon
so has part: feature:1427990-1428082:-1:exon
so has part: feature:1426775-1426915:-1:exon
so has part: feature:1425588-1425656:-1:exon
so has part: feature:1424750-1424833:-1:exon
so has part: feature:1424118-1424298:-1:exon
so has part: feature:1422142-1422258:-1:exon
so has part: feature:1421910-1421968:-1:exon
so has part: feature:1420619-1420750:-1:exon
so has part: feature:1419901-1420050:-1:exon
so has part: feature:1419285-1419329:-1:exon

XP_020222622.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1429847-1430128:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1429517-1429645:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1427990-1428082:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1426775-1426915:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1425588-1425656:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1424750-1424833:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1424118-1424298:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1422142-1422258:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1421910-1421968:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1420619-1420750:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1419901-1420050:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1419285-1419329:-1:exon

LOC109805144
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109805144
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1436575..1444103
location: region:1436575-1444103:1
so has part: feature:1436575-1444103:1:exon
subclass of: SO_0000010

109805144
type: Gene
SIO_000068: ncbigene

position:1436575:1
position: 1436575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1444103:1
position: 1444103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1436575-1444103:1:exon

LOC109805144
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805144
product: putative disease resistance RPP13-like protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_020367134.2
SIO_010081: LOC109805144
subclass of: SO_0000673
so part of: LOC109805144
location: join(1436575..1436958,1443868..1444103)
location: region:1436575-1444103:1
so has part: feature:1436575-1436958:1:exon
so has part: feature:1443868-1444103:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1436575-1436958:1:exon

position:1436958:1
position: 1436958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1443868-1444103:1:exon

position:1443868:1
position: 1443868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109805144
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805144
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative disease resistance RPP13-like protein 1 isoform X2
translation: MAFAMVGEALISASVEILLDRITSSEFRDYFANRKLNVSLLDELKIKLLSLNAVLNDAEEKQITDLAVRAWLDELKDAVLDAEDLLDEINTDSLRSKVEGESKTLTTRLVAEVVGT
SIO_010081: LOC109805144
subclass of: SO_0000673
so part of: LOC109805144
location: join(1436635..1436958,1443868..1443894)
location: region:1436635-1443894:1
so has part: feature:1436635-1436958:1:exon
so has part: feature:1443868-1443894:1:exon

XP_020222723.1
type: Protein
SIO_000068: ncbiprotein

position:1436635:1
position: 1436635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1443894:1
position: 1443894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1436635-1436958:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1443868-1443894:1:exon

LOC109805144
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805144
product: putative disease resistance RPP13-like protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_029272764.1
SIO_010081: LOC109805144
subclass of: SO_0000673
so part of: LOC109805144
location: join(1441427..1443665,1443868..1444103)
location: region:1441427-1444103:1
so has part: feature:1441427-1443665:1:exon
so has part: feature:1443868-1444103:1:exon

position:1441427:1
position: 1441427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1441427-1443665:1:exon

position:1443665:1
position: 1443665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1443868-1444103:1:exon

LOC109805144
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805144
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative disease resistance protein At3g14460 isoform X1
translation: MQLSGQIANLVNLRHLDIRDTNLNEIPKQICKLQDLRTLTSFVVGREDGLRIKELGKFLFLQGNLSILKLQNVVNPMDAFQANMKKKKQIEELTLKWGEDPQDSQIEKDVFENLQPSTNLKKLTIRYYSGTSFPKWLSESSYSNVIVLRISDCNYCLSLPPFGQLPSLKELVIQRMEMVKTVDEEFYSNNERSSLFQPFPMLESLQFEEMLEWEEWLPFKGENSEFPFPLLKHLSLSECPKLRGNLPNHLPSLKEVSISKCNQLEAKSCDLHWNTSIESLRISEGGKGLLSLLDEFSYEKLNIFKWDSLSCLPRMILGANCLQWLTLKRIPSLISFPNDGLPTSLKSLEINYCENLEFLSHETWHKYTSLESLEIRHSCHSLTSITLDCFPALERLSIISCPNLEAITTQGGGPAPKLINFKVRDCEKLRSLPELIDLPSLKYSSLSKLAVVASFGARFFPSSLQSLTVNVGMLSCMSKDELGFIFPRLTSLSHLRIEGGGEADVVNIMLKEPLLPTSLQGLYLQWLDGLKCLGMEGKGLQHLTSLQSLSLWGLDELKSWEGNGLQHLTSLRYLEIGYCGSLESLPEDHLPSSFEFLTIRNCPLLEERYQNQKGKYWSKIAHIPSISIKDEVII
SIO_010081: LOC109805144
subclass of: SO_0000673
so part of: LOC109805144
location: 1441731..1443635
location: region:1441731-1443635:1
so has part: feature:1441731-1443635:1:exon

XP_029128597.1
type: Protein
SIO_000068: ncbiprotein

position:1441731:1
position: 1441731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1443635:1
position: 1443635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1441731-1443635:1:exon

LOC114916302
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC114916302
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1453420..1462413)
location: region:1453420-1462413:-1
so has part: feature:1453420-1462413:-1:exon

114916302
type: Gene
SIO_000068: ncbigene

position:1453420:-1
position: 1453420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1462413:-1
position: 1462413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1453420-1462413:-1:exon

LOC114916302
type: Exon
subclass of: SO_0000147
RO_0002162: 3821
gene: LOC114916302
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 85% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC114916302
subclass of: SO_0000673
so part of: LOC114916302
location: complement(1453420..1454316)
location: region:1453420-1454316:-1
so has part: feature:1453420-1454316:-1:exon

position:1454316:-1
position: 1454316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1453420-1454316:-1:exon

LOC114916302
type: Exon
subclass of: SO_0000147
RO_0002162: 3821
gene: LOC114916302
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 85% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC114916302
subclass of: SO_0000673
so part of: LOC114916302
location: complement(1459579..1460302)
location: region:1459579-1460302:-1
so has part: feature:1459579-1460302:-1:exon

position:1459579:-1
position: 1459579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1460302:-1
position: 1460302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1459579-1460302:-1:exon

LOC114916302
type: Exon
subclass of: SO_0000147
RO_0002162: 3821
gene: LOC114916302
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 85% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC114916302
subclass of: SO_0000673
so part of: LOC114916302
location: complement(1462255..1462413)
location: region:1462255-1462413:-1
so has part: feature:1462255-1462413:-1:exon

position:1462255:-1
position: 1462255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1462255-1462413:-1:exon

LOC109804932
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804932
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1464129..1465055)
location: region:1464129-1465055:-1
so has part: feature:1464129-1465055:-1:exon
subclass of: SO_0000010

109804932
type: Gene
SIO_000068: ncbigene

position:1464129:-1
position: 1464129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1465055:-1
position: 1465055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1464129-1465055:-1:exon

LOC109804932
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804932
product: probable strigolactone esterase DAD2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_029272701.1
SIO_010081: LOC109804932
subclass of: SO_0000673
so part of: LOC109804932
location: complement(join(1464129..1464269,1464690..1465055))
location: region:1464129-1465055:-1
so has part: feature:1464690-1465055:-1:exon
so has part: feature:1464129-1464269:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1464690-1465055:-1:exon

position:1464690:-1
position: 1464690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1464129-1464269:-1:exon

position:1464269:-1
position: 1464269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109804932
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804932
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable strigolactone esterase DAD2
translation: MMTPQKSLSAALNARIIGSGIETIVFCHGFGADQSIWDKIIPLLAENYSLVLFDWPFSGTVTDKNLYDHAKYTSFKPYADDLITIIGEMVLKCVTFVGHSMSAMIGSFASTKKPELFKRLILKTVVDVATIISNEIHQAILSTPSPTGVSKPLGFPGLIMGLCQAASS
SIO_010081: LOC109804932
subclass of: SO_0000673
so part of: LOC109804932
location: complement(join(1464129..1464269,1464690..1465055))
location: region:1464129-1465055:-1
so has part: feature:1464690-1465055:-1:exon
so has part: feature:1464129-1464269:-1:exon

XP_029128534.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1464690-1465055:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1464129-1464269:-1:exon

LOC109804933
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804933
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1472219..1476708
location: region:1472219-1476708:1
so has part: feature:1472219-1476708:1:exon
subclass of: SO_0000010

109804933
type: Gene
SIO_000068: ncbigene

position:1472219:1
position: 1472219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1476708:1
position: 1476708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1472219-1476708:1:exon

LOC109804933
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804933
product: putative disease resistance protein At3g14460, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029272710.1
SIO_010081: LOC109804933
subclass of: SO_0000673
so part of: LOC109804933
location: join(1472219..1475587,1475670..1475915)
location: region:1472219-1475915:1
so has part: feature:1472219-1475587:1:exon
so has part: feature:1475670-1475915:1:exon

position:1475915:1
position: 1475915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1472219-1475587:1:exon

position:1475587:1
position: 1475587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1475670-1475915:1:exon

position:1475670:1
position: 1475670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109804933
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804933
product: putative disease resistance protein At3g14460, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_020366860.2
SIO_010081: LOC109804933
subclass of: SO_0000673
so part of: LOC109804933
location: join(1472221..1476214,1476417..1476708)
location: region:1472221-1476708:1
so has part: feature:1472221-1476214:1:exon
so has part: feature:1476417-1476708:1:exon

position:1472221:1
position: 1472221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1472221-1476214:1:exon

position:1476214:1
position: 1476214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1476417-1476708:1:exon

position:1476417:1
position: 1476417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109804933
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804933
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative disease resistance RPP13-like protein 1 isoform X1
translation: MAFAMVGEALISASVQTLLDRITSSEFRDYFANRKLNVSLLDELRIKLLSLNAVLNDAEEKQITDLAVRAWLDELKDAVLDAEDLLDEINTDSLRCKVEGESKTFLSSQVRSFLSSPFNQFYRSINSKLEAISTRLEHFVKHKDIIGLQSVSRRVSYRTVTDSLVESVVVAREDDKEKLLRMLLSDEDGNNNHIEVLTILGMGGLGKTTLAQCLYNDNAVQKHFDLTTWAWVSDDFDVFRVTKTIVESVTSKKIDSIDLDTLRVELKNNLRNKKFLLVLDDLWNEKYNDWNHLIAPFTSGKKGSKIIVTTRQHRVAQITHTFPICELKRLTDENCWCILAKHAFGNEGFNKYPMLEEIGRKIARKCDGLPLAAKTLGGLLRSVVDVEEWNRILNSNLWARDDVTPALRISYLHLPAHLKRCFAYCSIFPKQHLLDRKELILLWMAEGFLQQIHGEKSLESVGDECFNELLSRSLIEKDKAKAEQFRMHDLIYDLAKLVSGKSSYNFDGDEIPRTARHLAFPMKGFDVSKRFEGLYELKFVRTFLPQCPRVSHYYLTKKVSHGWLPKLRCLRTLSLSKYRNISELPNSIGNLVLLRYLDLSFTSIKKLPDATFTLYNLQTLKLANCKHLIQLPGEIANLVNLHHLDIRGTNLNEIPTQICKLQDLRTLTSFVVGREDGLSIKELRKFIFLQGNLSILKLQNIVDPMDAFQANMKKKKQIEELTLKWGKDPQDSKIEKDVLENLQPSTNLKKLTIRYYSGTSFPKWLSESSYSNVMFLHISYCKYCLSLPPFGQLPSLKELVIQRMKMVKIVGDEFYCNNERSPFFQPFPMLESLVFEEMLEWEEWLPFEGESSEFPFPLLKHLSLSQCPTLRGNLPSHLPSLKEVSISKCNQLEAKSCDLHWNTSIESLSISEGGKGLLSLLDEFSYEKLNIFIWDSLSCLPRMILGASCLQWLSLESIPSLISFPNDGLPTSLKSLDIRCCENLEFLSHETWHKYTSLESLEIRESCHSLTFITLDCFPALECLEITSCPNLEAITTQGGGAAPKLISVNVDDCEKLGSLLELIDLPSLKFLRLPKLAMVASLGARCFPSSLESLKVNVGVLSCMSKDELGFLFQRLTSLSSLSIEGGGEADVVNILLKEPLLPTSLQRLYLEGLDGLKCLGMEGKGLQHLTSLRSLVLNYLVELKSWEGNGLQHLTSLQSLGLCGLDKLKLWEGNGLQHLTSLLKLHITFCGSLESLPEDHLPSSLELLTIYRCPLLEERYQNQKGKYWYKIAHIPAIQINIDEVII
SIO_010081: LOC109804933
subclass of: SO_0000673
so part of: LOC109804933
location: 1472318..1476184
location: region:1472318-1476184:1
so has part: feature:1472318-1476184:1:exon

XP_020222449.1
type: Protein
SIO_000068: ncbiprotein

position:1472318:1
position: 1472318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1476184:1
position: 1476184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1472318-1476184:1:exon

LOC109804933
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804933
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative disease resistance protein At3g14460 isoform X2
translation: MAFAMVGEALISASVQTLLDRITSSEFRDYFANRKLNVSLLDELRIKLLSLNAVLNDAEEKQITDLAVRAWLDELKDAVLDAEDLLDEINTDSLRCKVEGESKTFLSSQVRSFLSSPFNQFYRSINSKLEAISTRLEHFVKHKDIIGLQSVSRRVSYRTVTDSLVESVVVAREDDKEKLLRMLLSDEDGNNNHIEVLTILGMGGLGKTTLAQCLYNDNAVQKHFDLTTWAWVSDDFDVFRVTKTIVESVTSKKIDSIDLDTLRVELKNNLRNKKFLLVLDDLWNEKYNDWNHLIAPFTSGKKGSKIIVTTRQHRVAQITHTFPICELKRLTDENCWCILAKHAFGNEGFNKYPMLEEIGRKIARKCDGLPLAAKTLGGLLRSVVDVEEWNRILNSNLWARDDVTPALRISYLHLPAHLKRCFAYCSIFPKQHLLDRKELILLWMAEGFLQQIHGEKSLESVGDECFNELLSRSLIEKDKAKAEQFRMHDLIYDLAKLVSGKSSYNFDGDEIPRTARHLAFPMKGFDVSKRFEGLYELKFVRTFLPQCPRVSHYYLTKKVSHGWLPKLRCLRTLSLSKYRNISELPNSIGNLVLLRYLDLSFTSIKKLPDATFTLYNLQTLKLANCKHLIQLPGEIANLVNLHHLDIRGTNLNEIPTQICKLQDLRTLTSFVVGREDGLSIKELRKFIFLQGNLSILKLQNIVDPMDAFQANMKKKKQIEELTLKWGKDPQDSKIEKDVLENLQPSTNLKKLTIRYYSGTSFPKWLSESSYSNVMFLHISYCKYCLSLPPFGQLPSLKELVIQRMKMVKIVGDEFYCNNERSPFFQPFPMLESLVFEEMLEWEEWLPFEGESSEFPFPLLKHLSLSQCPTLRGNLPSHLPSLKEVSISKCNQLEAKSCDLHWNTSIESLSISEGGKGLLSLLDEFSYEKLNIFIWDSLSCLPRMILGASCLQWLSLESIPSLISFPNDGLPTSLKSLDIRCCENLEFLSHETWHKYTSLESLEIRESCHSLTFITLDCFPALECLEITSCPNLEAITTQGGGAAPKLISVNVDDCEKLGSLLELIDLPSLKFLRLPKLAMVASLGARCFPSLLCLLFLLRVVGRQMLLTSC
SIO_010081: LOC109804933
subclass of: SO_0000673
so part of: LOC109804933
location: join(1472318..1475587,1475670..1475732)
location: region:1472318-1475732:1
so has part: feature:1472318-1475587:1:exon
so has part: feature:1475670-1475732:1:exon

XP_029128543.1
type: Protein
SIO_000068: ncbiprotein

position:1475732:1
position: 1475732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1472318-1475587:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1475670-1475732:1:exon

LOC109805123
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109805123
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1482517..1485330)
location: region:1482517-1485330:-1
so has part: feature:1482517-1485330:-1:exon
subclass of: SO_0000010

109805123
type: Gene
SIO_000068: ncbigene

position:1482517:-1
position: 1482517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1485330:-1
position: 1485330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1482517-1485330:-1:exon

LOC109805123
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805123
product: pentatricopeptide repeat-containing protein At1g18485
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020367106.2
SIO_010081: LOC109805123
subclass of: SO_0000673
so part of: LOC109805123
location: complement(1482517..1485330)
location: region:1482517-1485330:-1
so has part: feature:1482517-1485330:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1482517-1485330:-1:exon

LOC109805123
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805123
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pentatricopeptide repeat-containing protein At1g18485
translation: MIFHFYILKLKRPSIITTLTKNTHFSSLFSTFNTCSHSCNLLQLCTLCHTLSQIKQVHAFGILHGFLPRSVSLCASLILQYASFGHPSASLLLFQHTVPYSRTAFLWNTLIRANSIARVFDGFTTYNTMLRAGVKPDECTYPFVLKECSDFGEVHKGREVHGVVFKFGFDGDVFVGNTLLAFYGNCGLFSDAMKVFDEMPERDKVSWNTIIGLWSLHGFYKEALGSFRAMVAAVPEIQPDLVTVVSVLPVCAETEDEVMAGIVHCYALKVGLLGHVKVGNALVDVYGKCGSEKASKKVFDEIDERNVVSWNSIITSFSFRGKYMDALDVFRLMIGTGMRPNSVTISSMLPVLGELGLFKWGMEIHGFSLRMAIESDIFIANSLIDIYAKSGSSRIASIIFNKMEGRSIVSWNAMIANFAQNRLEFEAVELVRQMQAKGETPNNVTFTNVLPACARLGFLNVGKEIHARIIRVGSSRDLFVSNALTDMYSKCGCLNLAQNVFNISVRDEVSYNILIIGYSRTNDCSESISLFSEMILLGMLPDIVSFMGVISACANLASIRQGKEVHGLLMRKLFHTHLFVANSLLDLYTRCGRIDLATKVFDRIQNKDVASWNTMILGYGMLGELETAINLFEAMKEDGVEYDSVSFIAVLSACSHGGLIEKGRKYFKMMHDLNIEPAHTHYACMVDLLGRAGLMREAADLIRGLSIVPDTNIWGALLGACRIHGNIELGHWAAEHLFKLKPQHSGYYILLSNMYAEAERWDEANKVRELMKSRGAKKNPGCSWVQTGDQVHAFLVGEKIDSLDDDFWKSYIC
SIO_010081: LOC109805123
subclass of: SO_0000673
so part of: LOC109805123
location: complement(1482772..1485213)
location: region:1482772-1485213:-1
so has part: feature:1482772-1485213:-1:exon

XP_020222695.1
type: Protein
SIO_000068: ncbiprotein

position:1482772:-1
position: 1482772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1485213:-1
position: 1485213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1482772-1485213:-1:exon

LOC109804884
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804884
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1487663..1505493)
location: region:1487663-1505493:-1
so has part: feature:1487663-1505493:-1:exon
subclass of: SO_0000010

109804884
type: Gene
SIO_000068: ncbigene

position:1487663:-1
position: 1487663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1505493:-1
position: 1505493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1487663-1505493:-1:exon

LOC109804884
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804884
product: uncharacterized LOC109804884, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_020366793.2
SIO_010081: LOC109804884
subclass of: SO_0000673
so part of: LOC109804884
location: complement(join(1487663..1488372,1488753..1489250,1489346..1489831,1502281..1502775,1502861..1503213,1505311..1505493))
location: region:1487663-1505493:-1
so has part: feature:1505311-1505493:-1:exon
so has part: feature:1502861-1503213:-1:exon
so has part: feature:1502281-1502775:-1:exon
so has part: feature:1489346-1489831:-1:exon
so has part: feature:1488753-1489250:-1:exon
so has part: feature:1487663-1488372:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1505311-1505493:-1:exon

position:1505311:-1
position: 1505311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1502861-1503213:-1:exon

position:1502861:-1
position: 1502861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1503213:-1
position: 1503213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1502281-1502775:-1:exon

position:1502281:-1
position: 1502281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1502775:-1
position: 1502775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1489346-1489831:-1:exon

position:1489346:-1
position: 1489346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1489831:-1
position: 1489831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1488753-1489250:-1:exon

position:1488753:-1
position: 1488753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1489250:-1
position: 1489250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1487663-1488372:-1:exon

position:1488372:-1
position: 1488372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109804884
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804884
product: uncharacterized LOC109804884, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_020366792.2
SIO_010081: LOC109804884
subclass of: SO_0000673
so part of: LOC109804884
location: complement(join(1487663..1488372,1488753..1489250,1489346..1489831,1502281..1502775,1502861..1503213,1504144..1504221,1505311..1505493))
location: region:1487663-1505493:-1
so has part: feature:1505311-1505493:-1:exon
so has part: feature:1504144-1504221:-1:exon
so has part: feature:1502861-1503213:-1:exon
so has part: feature:1502281-1502775:-1:exon
so has part: feature:1489346-1489831:-1:exon
so has part: feature:1488753-1489250:-1:exon
so has part: feature:1487663-1488372:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1505311-1505493:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1504144-1504221:-1:exon

position:1504144:-1
position: 1504144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1504221:-1
position: 1504221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1502861-1503213:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1502281-1502775:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1489346-1489831:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1488753-1489250:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1487663-1488372:-1:exon

LOC109804884
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804884
product: uncharacterized LOC109804884, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_020366791.2
SIO_010081: LOC109804884
subclass of: SO_0000673
so part of: LOC109804884
location: complement(join(1487663..1488372,1488753..1489250,1489346..1489831,1502281..1502775,1502861..1503213,1504144..1504289,1505311..1505493))
location: region:1487663-1505493:-1
so has part: feature:1505311-1505493:-1:exon
so has part: feature:1504144-1504289:-1:exon
so has part: feature:1502861-1503213:-1:exon
so has part: feature:1502281-1502775:-1:exon
so has part: feature:1489346-1489831:-1:exon
so has part: feature:1488753-1489250:-1:exon
so has part: feature:1487663-1488372:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1505311-1505493:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1504144-1504289:-1:exon

position:1504289:-1
position: 1504289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1502861-1503213:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1502281-1502775:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1489346-1489831:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1488753-1489250:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1487663-1488372:-1:exon

LOC109804884
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804884
product: uncharacterized LOC109804884, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_020366790.2
SIO_010081: LOC109804884
subclass of: SO_0000673
so part of: LOC109804884
location: complement(join(1487663..1488372,1488753..1489250,1489346..1489831,1502281..1502775,1502861..1503213,1504144..1504299,1505311..1505493))
location: region:1487663-1505493:-1
so has part: feature:1505311-1505493:-1:exon
so has part: feature:1504144-1504299:-1:exon
so has part: feature:1502861-1503213:-1:exon
so has part: feature:1502281-1502775:-1:exon
so has part: feature:1489346-1489831:-1:exon
so has part: feature:1488753-1489250:-1:exon
so has part: feature:1487663-1488372:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1505311-1505493:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1504144-1504299:-1:exon

position:1504299:-1
position: 1504299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1502861-1503213:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1502281-1502775:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1489346-1489831:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1488753-1489250:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1487663-1488372:-1:exon

LOC109804884
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804884
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109804884 isoform X4
translation: MTGMHPKVYHTRSSSDKEKAKYMVWTNEMDKCLTEVLAEQVKKGNKVDNILKPAAFAGALKTLNEKYGMYVTKGQIKNRLKTWRKQFGVLKELLAHTGFMWNETKKMVVADNSVWNDYIKVHPDARIFRAKSIENYDQLCTILGNDQAIASFSDNVTEIDVNFAVDKGDPDLAVVSEIQTDGNQTKCLRWTAEMDHWLGKILVEQVRRGLKVDKVLLTEAYDTAVSAINAKLGLHLTKCNLKYRLKTWKKQYELLKELLSHTGFKWDETKKMVIANESTWSDYIRTHPDARTFRGRIFQNYDQFCIIFGHFNKPLHWDESEPCDEPVEALSVCPVNYDINVKDQGRQIRWTSDMDSCLSEILVQQIKQGNRSKFDYKLKSAAFEAAVLVINEKFQLYLVKEHVKNRLKTWKKQYDILKELMNQSGFEWDEKQKMVIANDSVWNEYIKKNPDARLLKGRVIRNYDELCIIIGHCDPPDSSTNDACANMGMTTNDSVMEVQETNFRRTNSAKEKGKNVSWTDEMDHCLTELLFNQVMLGNKLEKNFKTSAYIAALNVLNERFGLNITKENIISRLKTWKKQYGLMKEMLSQGRFEWDEERKMVVATDLDWDAYIKKHPDARHLRDRCIENYHELGMIVGNEQGSGNWSENIEMFDVNLTPNYEELAGTPAPVLANNVEMSHDGNASDEVQGSSEQTRARPSSSQSHSKQPSKRRRTSDVMLQMMSVMAADISRIADALSESNKTVCLEEVVEKVQNMPDFDDDLIIEACEYLCFDEKRALMFLKLDERLRKKWLLKRLRGQTDV
SIO_010081: LOC109804884
subclass of: SO_0000673
so part of: LOC109804884
location: complement(join(1487803..1488372,1488753..1489250,1489346..1489831,1502281..1502775,1502861..1503213,1505311..1505317))
location: region:1487803-1505317:-1
so has part: feature:1505311-1505317:-1:exon
so has part: feature:1502861-1503213:-1:exon
so has part: feature:1502281-1502775:-1:exon
so has part: feature:1489346-1489831:-1:exon
so has part: feature:1488753-1489250:-1:exon
so has part: feature:1487803-1488372:-1:exon

XP_020222382.1
type: Protein
SIO_000068: ncbiprotein

position:1487803:-1
position: 1487803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1505317:-1
position: 1505317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1505311-1505317:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1502861-1503213:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1502281-1502775:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1489346-1489831:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1488753-1489250:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1487803-1488372:-1:exon

LOC109804884
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804884
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109804884 isoform X3
translation: MTGIRVTYQPVVLESNHSPGLARAEGPPGMHPKVYHTRSSSDKEKAKYMVWTNEMDKCLTEVLAEQVKKGNKVDNILKPAAFAGALKTLNEKYGMYVTKGQIKNRLKTWRKQFGVLKELLAHTGFMWNETKKMVVADNSVWNDYIKVHPDARIFRAKSIENYDQLCTILGNDQAIASFSDNVTEIDVNFAVDKGDPDLAVVSEIQTDGNQTKCLRWTAEMDHWLGKILVEQVRRGLKVDKVLLTEAYDTAVSAINAKLGLHLTKCNLKYRLKTWKKQYELLKELLSHTGFKWDETKKMVIANESTWSDYIRTHPDARTFRGRIFQNYDQFCIIFGHFNKPLHWDESEPCDEPVEALSVCPVNYDINVKDQGRQIRWTSDMDSCLSEILVQQIKQGNRSKFDYKLKSAAFEAAVLVINEKFQLYLVKEHVKNRLKTWKKQYDILKELMNQSGFEWDEKQKMVIANDSVWNEYIKKNPDARLLKGRVIRNYDELCIIIGHCDPPDSSTNDACANMGMTTNDSVMEVQETNFRRTNSAKEKGKNVSWTDEMDHCLTELLFNQVMLGNKLEKNFKTSAYIAALNVLNERFGLNITKENIISRLKTWKKQYGLMKEMLSQGRFEWDEERKMVVATDLDWDAYIKKHPDARHLRDRCIENYHELGMIVGNEQGSGNWSENIEMFDVNLTPNYEELAGTPAPVLANNVEMSHDGNASDEVQGSSEQTRARPSSSQSHSKQPSKRRRTSDVMLQMMSVMAADISRIADALSESNKTVCLEEVVEKVQNMPDFDDDLIIEACEYLCFDEKRALMFLKLDERLRKKWLLKRLRGQTDV
SIO_010081: LOC109804884
subclass of: SO_0000673
so part of: LOC109804884
location: complement(join(1487803..1488372,1488753..1489250,1489346..1489831,1502281..1502775,1502861..1503213,1504144..1504221,1505311..1505317))
location: region:1487803-1505317:-1
so has part: feature:1505311-1505317:-1:exon
so has part: feature:1504144-1504221:-1:exon
so has part: feature:1502861-1503213:-1:exon
so has part: feature:1502281-1502775:-1:exon
so has part: feature:1489346-1489831:-1:exon
so has part: feature:1488753-1489250:-1:exon
so has part: feature:1487803-1488372:-1:exon

XP_020222381.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1505311-1505317:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1504144-1504221:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1502861-1503213:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1502281-1502775:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1489346-1489831:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1488753-1489250:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1487803-1488372:-1:exon

LOC109804884
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804884
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109804884 isoform X1
translation: MTEKFRLGESSLPYKAKEDHQTQRGFMAGIRVTYQPVVLESNHSPGLARAEGPPGMHPKVYHTRSSSDKEKAKYMVWTNEMDKCLTEVLAEQVKKGNKVDNILKPAAFAGALKTLNEKYGMYVTKGQIKNRLKTWRKQFGVLKELLAHTGFMWNETKKMVVADNSVWNDYIKVHPDARIFRAKSIENYDQLCTILGNDQAIASFSDNVTEIDVNFAVDKGDPDLAVVSEIQTDGNQTKCLRWTAEMDHWLGKILVEQVRRGLKVDKVLLTEAYDTAVSAINAKLGLHLTKCNLKYRLKTWKKQYELLKELLSHTGFKWDETKKMVIANESTWSDYIRTHPDARTFRGRIFQNYDQFCIIFGHFNKPLHWDESEPCDEPVEALSVCPVNYDINVKDQGRQIRWTSDMDSCLSEILVQQIKQGNRSKFDYKLKSAAFEAAVLVINEKFQLYLVKEHVKNRLKTWKKQYDILKELMNQSGFEWDEKQKMVIANDSVWNEYIKKNPDARLLKGRVIRNYDELCIIIGHCDPPDSSTNDACANMGMTTNDSVMEVQETNFRRTNSAKEKGKNVSWTDEMDHCLTELLFNQVMLGNKLEKNFKTSAYIAALNVLNERFGLNITKENIISRLKTWKKQYGLMKEMLSQGRFEWDEERKMVVATDLDWDAYIKKHPDARHLRDRCIENYHELGMIVGNEQGSGNWSENIEMFDVNLTPNYEELAGTPAPVLANNVEMSHDGNASDEVQGSSEQTRARPSSSQSHSKQPSKRRRTSDVMLQMMSVMAADISRIADALSESNKTVCLEEVVEKVQNMPDFDDDLIIEACEYLCFDEKRALMFLKLDERLRKKWLLKRLRGQTDV
SIO_010081: LOC109804884
subclass of: SO_0000673
so part of: LOC109804884
location: complement(join(1487803..1488372,1488753..1489250,1489346..1489831,1502281..1502775,1502861..1503213,1504144..1504299,1505311..1505317))
location: region:1487803-1505317:-1
so has part: feature:1505311-1505317:-1:exon
so has part: feature:1504144-1504299:-1:exon
so has part: feature:1502861-1503213:-1:exon
so has part: feature:1502281-1502775:-1:exon
so has part: feature:1489346-1489831:-1:exon
so has part: feature:1488753-1489250:-1:exon
so has part: feature:1487803-1488372:-1:exon

XP_020222379.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1505311-1505317:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1504144-1504299:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1502861-1503213:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1502281-1502775:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1489346-1489831:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1488753-1489250:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1487803-1488372:-1:exon

LOC109804884
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804884
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109804884 isoform X2
translation: MAGIRVTYQPVVLESNHSPGLARAEGPPGMHPKVYHTRSSSDKEKAKYMVWTNEMDKCLTEVLAEQVKKGNKVDNILKPAAFAGALKTLNEKYGMYVTKGQIKNRLKTWRKQFGVLKELLAHTGFMWNETKKMVVADNSVWNDYIKVHPDARIFRAKSIENYDQLCTILGNDQAIASFSDNVTEIDVNFAVDKGDPDLAVVSEIQTDGNQTKCLRWTAEMDHWLGKILVEQVRRGLKVDKVLLTEAYDTAVSAINAKLGLHLTKCNLKYRLKTWKKQYELLKELLSHTGFKWDETKKMVIANESTWSDYIRTHPDARTFRGRIFQNYDQFCIIFGHFNKPLHWDESEPCDEPVEALSVCPVNYDINVKDQGRQIRWTSDMDSCLSEILVQQIKQGNRSKFDYKLKSAAFEAAVLVINEKFQLYLVKEHVKNRLKTWKKQYDILKELMNQSGFEWDEKQKMVIANDSVWNEYIKKNPDARLLKGRVIRNYDELCIIIGHCDPPDSSTNDACANMGMTTNDSVMEVQETNFRRTNSAKEKGKNVSWTDEMDHCLTELLFNQVMLGNKLEKNFKTSAYIAALNVLNERFGLNITKENIISRLKTWKKQYGLMKEMLSQGRFEWDEERKMVVATDLDWDAYIKKHPDARHLRDRCIENYHELGMIVGNEQGSGNWSENIEMFDVNLTPNYEELAGTPAPVLANNVEMSHDGNASDEVQGSSEQTRARPSSSQSHSKQPSKRRRTSDVMLQMMSVMAADISRIADALSESNKTVCLEEVVEKVQNMPDFDDDLIIEACEYLCFDEKRALMFLKLDERLRKKWLLKRLRGQTDV
SIO_010081: LOC109804884
subclass of: SO_0000673
so part of: LOC109804884
location: complement(join(1487803..1488372,1488753..1489250,1489346..1489831,1502281..1502775,1502861..1503213,1504144..1504228))
location: region:1487803-1504228:-1
so has part: feature:1504144-1504228:-1:exon
so has part: feature:1502861-1503213:-1:exon
so has part: feature:1502281-1502775:-1:exon
so has part: feature:1489346-1489831:-1:exon
so has part: feature:1488753-1489250:-1:exon
so has part: feature:1487803-1488372:-1:exon

XP_020222380.1
type: Protein
SIO_000068: ncbiprotein

position:1504228:-1
position: 1504228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1504144-1504228:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1502861-1503213:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1502281-1502775:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1489346-1489831:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1488753-1489250:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1487803-1488372:-1:exon

LOC114916311
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC114916311
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1511673..1517083
location: region:1511673-1517083:1
so has part: feature:1511673-1517083:1:exon
subclass of: SO_0000011

114916311
type: Gene
SIO_000068: ncbigene

position:1511673:1
position: 1511673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1517083:1
position: 1517083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1511673-1517083:1:exon

LOC114916311
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3821
nc RNA class: lncRNA
gene: LOC114916311
product: uncharacterized LOC114916311
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XR_003804713.1
SIO_010081: LOC114916311
subclass of: SO_0000673
so part of: LOC114916311
location: join(1511673..1512234,1515536..1517083)
location: region:1511673-1517083:1
so has part: feature:1511673-1512234:1:exon
so has part: feature:1515536-1517083:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1511673-1512234:1:exon

position:1512234:1
position: 1512234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1515536-1517083:1:exon

position:1515536:1
position: 1515536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109805337
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109805337
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1542006..1547092
location: region:1542006-1547092:1
so has part: feature:1542006-1547092:1:exon
subclass of: SO_0000010

109805337
type: Gene
SIO_000068: ncbigene

position:1542006:1
position: 1542006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1547092:1
position: 1547092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1542006-1547092:1:exon

LOC109805337
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805337
product: molybdopterin synthase catalytic subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_020367377.2
SIO_010081: LOC109805337
subclass of: SO_0000673
so part of: LOC109805337
location: join(1542006..1542132,1546053..1547092)
location: region:1542006-1547092:1
so has part: feature:1542006-1542132:1:exon
so has part: feature:1546053-1547092:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1542006-1542132:1:exon

position:1542132:1
position: 1542132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1546053-1547092:1:exon

position:1546053:1
position: 1546053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109805337
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805337
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: molybdopterin synthase catalytic subunit
translation: MAAEDDKNLVEILENLNPVDVAKYMNFVSAPQAGAIATFSGTTRDSFEGKTVLELRYEAYVPMAIRCIKSICSSARASWNLHSIAVAHRLGTVPVGETSVFVAVSSVHRADALEACRFLIDEVKATVPIWKKEVYSNGEVWKENNEFLERRFELGNKDVNCCGKKAETKEHIKKPCCGTKVRVDDEGS
SIO_010081: LOC109805337
subclass of: SO_0000673
so part of: LOC109805337
location: 1546255..1546821
location: region:1546255-1546821:1
so has part: feature:1546255-1546821:1:exon

XP_020222966.1
type: Protein
SIO_000068: ncbiprotein

position:1546255:1
position: 1546255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1546821:1
position: 1546821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1546255-1546821:1:exon

LOC109805156
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109805156
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1550662..1565852
location: region:1550662-1565852:1
so has part: feature:1550662-1565852:1:exon
subclass of: SO_0000010

109805156
type: Gene
SIO_000068: ncbigene

position:1550662:1
position: 1550662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1565852:1
position: 1565852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1550662-1565852:1:exon

LOC109805156
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805156
product: mitochondrial inner membrane protein OXA1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_020367154.2
SIO_010081: LOC109805156
subclass of: SO_0000673
so part of: LOC109805156
location: join(1550662..1550791,1555259..1555745,1556973..1557063,1557405..1557452,1558209..1558267,1560477..1560552,1560650..1560781,1561013..1561120,1564062..1564116,1565190..1565852)
location: region:1550662-1565852:1
so has part: feature:1550662-1550791:1:exon
so has part: feature:1555259-1555745:1:exon
so has part: feature:1556973-1557063:1:exon
so has part: feature:1557405-1557452:1:exon
so has part: feature:1558209-1558267:1:exon
so has part: feature:1560477-1560552:1:exon
so has part: feature:1560650-1560781:1:exon
so has part: feature:1561013-1561120:1:exon
so has part: feature:1564062-1564116:1:exon
so has part: feature:1565190-1565852:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1550662-1550791:1:exon

position:1550791:1
position: 1550791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1555259-1555745:1:exon

position:1555259:1
position: 1555259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1555745:1
position: 1555745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1556973-1557063:1:exon

position:1556973:1
position: 1556973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1557063:1
position: 1557063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1557405-1557452:1:exon

position:1557405:1
position: 1557405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1557452:1
position: 1557452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1558209-1558267:1:exon

position:1558209:1
position: 1558209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1558267:1
position: 1558267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1560477-1560552:1:exon

position:1560477:1
position: 1560477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1560552:1
position: 1560552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1560650-1560781:1:exon

position:1560650:1
position: 1560650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1560781:1
position: 1560781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1561013-1561120:1:exon

position:1561013:1
position: 1561013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1561120:1
position: 1561120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1564062-1564116:1:exon

position:1564062:1
position: 1564062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1564116:1
position: 1564116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1565190-1565852:1:exon

position:1565190:1
position: 1565190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109805156
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805156
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial inner membrane protein OXA1
translation: MAHRRCLLIRGNLMNRKCHPSFSYVLHSDDWRRECPDEKSPSEGISNSNQRRMFGNSVDGSIWFVAYSGHRMQSNRFLSAYSGYNFCRHMSTVNQGSDKIDIMTDIADVLKDTTVEAVTSQAPIVKEVAIAAADSFLPVKALQYIIDAVHSYTGLNWWAAIVLTTLFIRSATVPLIINQLKATSKLTLMRPHMEKIKQEIEDKAMDPVAVAEGQKKMKNLFKEYGTSPFTPLKGLFIQGPVFISFFLAIRNMAEKMPSFKHGGAYWFVDLTTPDALYVLPVLTGLSFLITVECNMQEGLEGNPVAGTMKKFSRGLAVLTVPFTMGFPKAIFCYWITSNLFSLVYGLVLKAPGVKEALGIPKLPDAAPTSAPQSPFSLFPALKKAKSATNGPTSLPVEPSKHPKKNTSSPDASQRHKKTSSPDVSQRLKRLEKQVKGRKKNKN
SIO_010081: LOC109805156
subclass of: SO_0000673
so part of: LOC109805156
location: join(1555276..1555745,1556973..1557063,1557405..1557452,1558209..1558267,1560477..1560552,1560650..1560781,1561013..1561120,1564062..1564116,1565190..1565479)
location: region:1555276-1565479:1
so has part: feature:1555276-1555745:1:exon
so has part: feature:1556973-1557063:1:exon
so has part: feature:1557405-1557452:1:exon
so has part: feature:1558209-1558267:1:exon
so has part: feature:1560477-1560552:1:exon
so has part: feature:1560650-1560781:1:exon
so has part: feature:1561013-1561120:1:exon
so has part: feature:1564062-1564116:1:exon
so has part: feature:1565190-1565479:1:exon

XP_020222743.1
type: Protein
SIO_000068: ncbiprotein

position:1555276:1
position: 1555276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1565479:1
position: 1565479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1555276-1555745:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1556973-1557063:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1557405-1557452:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1558209-1558267:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1560477-1560552:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1560650-1560781:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1561013-1561120:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1564062-1564116:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1565190-1565479:1:exon

LOC109804934
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804934
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1576539..1577018
location: region:1576539-1577018:1
so has part: feature:1576539-1577018:1:exon
subclass of: SO_0000010

109804934
type: Gene
SIO_000068: ncbigene

position:1576539:1
position: 1576539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1577018:1
position: 1577018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1576539-1577018:1:exon

LOC109804934
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804934
product: uncharacterized LOC109804934
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_020366861.1
SIO_010081: LOC109804934
subclass of: SO_0000673
so part of: LOC109804934
location: 1576539..1577018
location: region:1576539-1577018:1
so has part: feature:1576539-1577018:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1576539-1577018:1:exon

LOC109804934
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804934
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109804934
translation: MIVQSIGEIIEVDPSTSISTIIAHIKSTMGYTISYRKRWLSKQHAIENIFGNREESYNKLPGMLQAMQMYVPGFIWKLNTQPAYQGGILDAGSVIFKRLFWTFKPCIDGFAFCKPIVQVDGTFLYERYKGTLLIAVAQDGRNNVIPIAFAVVEGETSDA
SIO_010081: LOC109804934
subclass of: SO_0000673
so part of: LOC109804934
location: 1576539..1577018
location: region:1576539-1577018:1
so has part: feature:1576539-1577018:1:exon

XP_020222450.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1576539-1577018:1:exon

LOC109804935
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804935
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1582431..1600619)
location: region:1582431-1600619:-1
so has part: feature:1582431-1600619:-1:exon
subclass of: SO_0000010

109804935
type: Gene
SIO_000068: ncbigene

position:1582431:-1
position: 1582431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1600619:-1
position: 1600619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1582431-1600619:-1:exon

LOC109804935
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804935
product: serine carboxypeptidase-like 17, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_029272755.1
SIO_010081: LOC109804935
subclass of: SO_0000673
so part of: LOC109804935
location: complement(join(1582431..1582641,1590151..1590205,1590281..1590394,1591174..1591292,1591406..1591477,1594342..1594464,1594547..1594633,1595189..1595290,1595405..1595442,1596155..1596257,1596751..1596873,1598904..1598980,1600149..1600294,1600421..1600619))
location: region:1582431-1600619:-1
so has part: feature:1600421-1600619:-1:exon
so has part: feature:1600149-1600294:-1:exon
so has part: feature:1598904-1598980:-1:exon
so has part: feature:1596751-1596873:-1:exon
so has part: feature:1596155-1596257:-1:exon
so has part: feature:1595405-1595442:-1:exon
so has part: feature:1595189-1595290:-1:exon
so has part: feature:1594547-1594633:-1:exon
so has part: feature:1594342-1594464:-1:exon
so has part: feature:1591406-1591477:-1:exon
so has part: feature:1591174-1591292:-1:exon
so has part: feature:1590281-1590394:-1:exon
so has part: feature:1590151-1590205:-1:exon
so has part: feature:1582431-1582641:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1600421-1600619:-1:exon

position:1600421:-1
position: 1600421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1600149-1600294:-1:exon

position:1600149:-1
position: 1600149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1600294:-1
position: 1600294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1598904-1598980:-1:exon

position:1598904:-1
position: 1598904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1598980:-1
position: 1598980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1596751-1596873:-1:exon

position:1596751:-1
position: 1596751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1596873:-1
position: 1596873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1596155-1596257:-1:exon

position:1596155:-1
position: 1596155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1596257:-1
position: 1596257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1595405-1595442:-1:exon

position:1595405:-1
position: 1595405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1595442:-1
position: 1595442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1595189-1595290:-1:exon

position:1595189:-1
position: 1595189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1595290:-1
position: 1595290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1594547-1594633:-1:exon

position:1594547:-1
position: 1594547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1594633:-1
position: 1594633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1594342-1594464:-1:exon

position:1594342:-1
position: 1594342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1594464:-1
position: 1594464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1591406-1591477:-1:exon

position:1591406:-1
position: 1591406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1591477:-1
position: 1591477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1591174-1591292:-1:exon

position:1591174:-1
position: 1591174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1591292:-1
position: 1591292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1590281-1590394:-1:exon

position:1590281:-1
position: 1590281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1590394:-1
position: 1590394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1590151-1590205:-1:exon

position:1590151:-1
position: 1590151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1590205:-1
position: 1590205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1582431-1582641:-1:exon

position:1582641:-1
position: 1582641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109804935
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804935
product: serine carboxypeptidase-like 17, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_029272756.1
SIO_010081: LOC109804935
subclass of: SO_0000673
so part of: LOC109804935
location: complement(join(1582431..1582641,1590151..1590205,1590281..1590394,1591174..1591292,1591406..1591477,1594342..1594464,1594547..1594633,1595189..1595290,1595405..1595442,1596155..1596257,1596751..1596873,1600149..1600294,1600421..1600558))
location: region:1582431-1600558:-1
so has part: feature:1600421-1600558:-1:exon
so has part: feature:1600149-1600294:-1:exon
so has part: feature:1596751-1596873:-1:exon
so has part: feature:1596155-1596257:-1:exon
so has part: feature:1595405-1595442:-1:exon
so has part: feature:1595189-1595290:-1:exon
so has part: feature:1594547-1594633:-1:exon
so has part: feature:1594342-1594464:-1:exon
so has part: feature:1591406-1591477:-1:exon
so has part: feature:1591174-1591292:-1:exon
so has part: feature:1590281-1590394:-1:exon
so has part: feature:1590151-1590205:-1:exon
so has part: feature:1582431-1582641:-1:exon

position:1600558:-1
position: 1600558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1600421-1600558:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1600149-1600294:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1596751-1596873:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1596155-1596257:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1595405-1595442:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1595189-1595290:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1594547-1594633:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1594342-1594464:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1591406-1591477:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1591174-1591292:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1590281-1590394:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1590151-1590205:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1582431-1582641:-1:exon

LOC109804935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804935
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine carboxypeptidase-like 17 isoform X1
translation: MVRVWNSWWVFVSVLLLFHVTSSHFIVKNLPGFGDLPFTLNTGYIGVGEREEVQLYYYFVESQRSPLNDPFLLWLVGGPGCSAHSAFFYENGPLIFNYEDFNGSSPTLLLNPNTWTKVLNILYVDAPVGTGYSYSKTQEGYYSNDKQLVEHIYDFLQKWQVDYPEFRSNPFYIGGGSYSGKVVLPLAHKIYEDYKAGRSPILNFQGFVLSSPSIDTFLDNNTKVEFAHQRTLISDELYESIKSNCNGDYVNLDPNNKNCMSDYEAYYELIRYIDEYQILRRSCKLASKENQRILSEEFKNIRQTKFRCRDDEYAVGELWANDPHVLKALRVREGTKEEFRRCNHSSAFTLNVPSVVEYLQNLTNTNLRSLIYCADLDLALPYLSSLSIVKSLKLKLDMAWHPWFVDGEVAGYAEEHKKSEYCLTYAIVKGAGHVAQETKPKEVYEMIDRWLSFSDI
SIO_010081: LOC109804935
subclass of: SO_0000673
so part of: LOC109804935
location: complement(join(1582558..1582641,1590151..1590205,1590281..1590394,1591174..1591292,1591406..1591477,1594342..1594464,1594547..1594633,1595189..1595290,1595405..1595442,1596155..1596257,1596751..1596873,1598904..1598980,1600149..1600294,1600421..1600548))
location: region:1582558-1600548:-1
so has part: feature:1600421-1600548:-1:exon
so has part: feature:1600149-1600294:-1:exon
so has part: feature:1598904-1598980:-1:exon
so has part: feature:1596751-1596873:-1:exon
so has part: feature:1596155-1596257:-1:exon
so has part: feature:1595405-1595442:-1:exon
so has part: feature:1595189-1595290:-1:exon
so has part: feature:1594547-1594633:-1:exon
so has part: feature:1594342-1594464:-1:exon
so has part: feature:1591406-1591477:-1:exon
so has part: feature:1591174-1591292:-1:exon
so has part: feature:1590281-1590394:-1:exon
so has part: feature:1590151-1590205:-1:exon
so has part: feature:1582558-1582641:-1:exon

XP_029128588.1
type: Protein
SIO_000068: ncbiprotein

position:1582558:-1
position: 1582558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1600548:-1
position: 1600548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1600421-1600548:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1600149-1600294:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1598904-1598980:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1596751-1596873:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1596155-1596257:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1595405-1595442:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1595189-1595290:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1594547-1594633:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1594342-1594464:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1591406-1591477:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1591174-1591292:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1590281-1590394:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1590151-1590205:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1582558-1582641:-1:exon

LOC109804935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804935
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine carboxypeptidase-like 18 isoform X2
translation: MTLFFFGSLEVQVALHILLSSMKMVLNILYVDAPVGTGYSYSKTQEGYYSNDKQLVEHIYDFLQKWQVDYPEFRSNPFYIGGGSYSGKVVLPLAHKIYEDYKAGRSPILNFQGFVLSSPSIDTFLDNNTKVEFAHQRTLISDELYESIKSNCNGDYVNLDPNNKNCMSDYEAYYELIRYIDEYQILRRSCKLASKENQRILSEEFKNIRQTKFRCRDDEYAVGELWANDPHVLKALRVREGTKEEFRRCNHSSAFTLNVPSVVEYLQNLTNTNLRSLIYCADLDLALPYLSSLSIVKSLKLKLDMAWHPWFVDGEVAGYAEEHKKSEYCLTYAIVKGAGHVAQETKPKEVYEMIDRWLSFSDI
SIO_010081: LOC109804935
subclass of: SO_0000673
so part of: LOC109804935
location: complement(join(1582558..1582641,1590151..1590205,1590281..1590394,1591174..1591292,1591406..1591477,1594342..1594464,1594547..1594633,1595189..1595290,1595405..1595442,1596155..1596257,1596751..1596873,1600149..1600220))
location: region:1582558-1600220:-1
so has part: feature:1600149-1600220:-1:exon
so has part: feature:1596751-1596873:-1:exon
so has part: feature:1596155-1596257:-1:exon
so has part: feature:1595405-1595442:-1:exon
so has part: feature:1595189-1595290:-1:exon
so has part: feature:1594547-1594633:-1:exon
so has part: feature:1594342-1594464:-1:exon
so has part: feature:1591406-1591477:-1:exon
so has part: feature:1591174-1591292:-1:exon
so has part: feature:1590281-1590394:-1:exon
so has part: feature:1590151-1590205:-1:exon
so has part: feature:1582558-1582641:-1:exon

XP_029128589.1
type: Protein
SIO_000068: ncbiprotein

position:1600220:-1
position: 1600220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1600149-1600220:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1596751-1596873:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1596155-1596257:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1595405-1595442:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1595189-1595290:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1594547-1594633:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1594342-1594464:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1591406-1591477:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1591174-1591292:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1590281-1590394:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1590151-1590205:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1582558-1582641:-1:exon

LOC109804774
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804774
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1586330..1587575)
location: region:1586330-1587575:-1
so has part: feature:1586330-1587575:-1:exon
subclass of: SO_0000011

109804774
type: Gene
SIO_000068: ncbigene

position:1586330:-1
position: 1586330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1587575:-1
position: 1587575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1586330-1587575:-1:exon

LOC109804774
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3821
nc RNA class: lncRNA
gene: LOC109804774
product: uncharacterized LOC109804774
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_002240250.2
SIO_010081: LOC109804774
subclass of: SO_0000673
so part of: LOC109804774
location: complement(join(1586330..1586513,1587330..1587419,1587541..1587575))
location: region:1586330-1587575:-1
so has part: feature:1587541-1587575:-1:exon
so has part: feature:1587330-1587419:-1:exon
so has part: feature:1586330-1586513:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1587541-1587575:-1:exon

position:1587541:-1
position: 1587541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1587330-1587419:-1:exon

position:1587330:-1
position: 1587330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1587419:-1
position: 1587419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1586330-1586513:-1:exon

position:1586513:-1
position: 1586513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC114916309
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC114916309
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1604904..1605177
location: region:1604904-1605177:1
so has part: feature:1604904-1605177:1:exon
subclass of: SO_0000011

114916309
type: Gene
SIO_000068: ncbigene

position:1604904:1
position: 1604904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1605177:1
position: 1605177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1604904-1605177:1:exon

LOC114916309
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3821
nc RNA class: lncRNA
gene: LOC114916309
product: uncharacterized LOC114916309
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_003804711.1
SIO_010081: LOC114916309
subclass of: SO_0000673
so part of: LOC114916309
location: join(1604904..1604992,1605068..1605177)
location: region:1604904-1605177:1
so has part: feature:1604904-1604992:1:exon
so has part: feature:1605068-1605177:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1604904-1604992:1:exon

position:1604992:1
position: 1604992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1605068-1605177:1:exon

position:1605068:1
position: 1605068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109804791
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804791
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1606133..1607365)
location: region:1606133-1607365:-1
so has part: feature:1606133-1607365:-1:exon
subclass of: SO_0000011

109804791
type: Gene
SIO_000068: ncbigene

position:1606133:-1
position: 1606133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1607365:-1
position: 1607365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1606133-1607365:-1:exon

LOC109804791
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3821
nc RNA class: lncRNA
gene: LOC109804791
product: uncharacterized LOC109804791
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_002240254.1
SIO_010081: LOC109804791
subclass of: SO_0000673
so part of: LOC109804791
location: complement(join(1606133..1606158,1606976..1607065,1607187..1607365))
location: region:1606133-1607365:-1
so has part: feature:1607187-1607365:-1:exon
so has part: feature:1606976-1607065:-1:exon
so has part: feature:1606133-1606158:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1607187-1607365:-1:exon

position:1607187:-1
position: 1607187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1606976-1607065:-1:exon

position:1606976:-1
position: 1606976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1607065:-1
position: 1607065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1606133-1606158:-1:exon

position:1606158:-1
position: 1606158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109804906
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804906
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1619980..1627313
location: region:1619980-1627313:1
so has part: feature:1619980-1627313:1:exon
subclass of: SO_0000010

109804906
type: Gene
SIO_000068: ncbigene

position:1619980:1
position: 1619980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1627313:1
position: 1627313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1619980-1627313:1:exon

LOC109804906
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804906
product: hydroxymethylglutaryl-CoA lyase, mitochondrial
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_020366824.2
SIO_010081: LOC109804906
subclass of: SO_0000673
so part of: LOC109804906
location: join(1619980..1620155,1621623..1621813,1621989..1622196,1622376..1622555,1622932..1623012,1623081..1623244,1624690..1624826,1626154..1626269,1626730..1627313)
location: region:1619980-1627313:1
so has part: feature:1619980-1620155:1:exon
so has part: feature:1621623-1621813:1:exon
so has part: feature:1621989-1622196:1:exon
so has part: feature:1622376-1622555:1:exon
so has part: feature:1622932-1623012:1:exon
so has part: feature:1623081-1623244:1:exon
so has part: feature:1624690-1624826:1:exon
so has part: feature:1626154-1626269:1:exon
so has part: feature:1626730-1627313:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1619980-1620155:1:exon

position:1620155:1
position: 1620155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1621623-1621813:1:exon

position:1621623:1
position: 1621623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1621813:1
position: 1621813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1621989-1622196:1:exon

position:1621989:1
position: 1621989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1622196:1
position: 1622196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1622376-1622555:1:exon

position:1622376:1
position: 1622376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1622555:1
position: 1622555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1622932-1623012:1:exon

position:1622932:1
position: 1622932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1623012:1
position: 1623012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1623081-1623244:1:exon

position:1623081:1
position: 1623081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1623244:1
position: 1623244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1624690-1624826:1:exon

position:1624690:1
position: 1624690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1624826:1
position: 1624826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1626154-1626269:1:exon

position:1626154:1
position: 1626154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1626269:1
position: 1626269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1626730-1627313:1:exon

position:1626730:1
position: 1626730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109804906
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804906
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hydroxymethylglutaryl-CoA lyase, mitochondrial
translation: MSSLEEPLGLDKLPSMNTIDRIQRFSSGACRPRGDNLGMGNCWIEGRICSTSNSCNEDNEEYTTETFPWRRQTRDLSRVDSFSQKTMTMGWNSMKCGMIDNSLYASDYQYSPKCNNKNIQDMAYKFMKGIPKFVKIVEVGPRDGLQNEKNIVPTDVKIELIHRLASSGLSVVEATSFVSPKWVPQLADAKDVMQAVQNLGGIRLPVLTPNLKGFEAAIAAGAREVAVFASASESFSKSNINCSIEESLARYRAVTLAAKELSIPVRGYVSCVVGCPVEGSIPPSIVAYVAKELYDMGCFEISLGDTIGVGTPGTVVPMLLAVMDVVPVEKLAVHFHDTYGQSLPNILVSLQMGISAVDSSVSGLGGCPYAKGASGNVATEDVVYMLNGLGVKTNVDLGKLMSAGDFISKHLGRPSGSKTAVAFSRVTADASKI
SIO_010081: LOC109804906
subclass of: SO_0000673
so part of: LOC109804906
location: join(1621647..1621813,1621989..1622196,1622376..1622555,1622932..1623012,1623081..1623244,1624690..1624826,1626154..1626269,1626730..1626978)
location: region:1621647-1626978:1
so has part: feature:1621647-1621813:1:exon
so has part: feature:1621989-1622196:1:exon
so has part: feature:1622376-1622555:1:exon
so has part: feature:1622932-1623012:1:exon
so has part: feature:1623081-1623244:1:exon
so has part: feature:1624690-1624826:1:exon
so has part: feature:1626154-1626269:1:exon
so has part: feature:1626730-1626978:1:exon

XP_020222413.1
type: Protein
SIO_000068: ncbiprotein

position:1621647:1
position: 1621647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1626978:1
position: 1626978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1621647-1621813:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1621989-1622196:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1622376-1622555:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1622932-1623012:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1623081-1623244:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1624690-1624826:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1626154-1626269:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1626730-1626978:1:exon

LOC109804937
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804937
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1648413..1649629)
location: region:1648413-1649629:-1
so has part: feature:1648413-1649629:-1:exon
subclass of: SO_0000010

109804937
type: Gene
SIO_000068: ncbigene

position:1648413:-1
position: 1648413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1649629:-1
position: 1649629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1648413-1649629:-1:exon

LOC109804937
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804937
product: retrovirus-related Pol polyprotein from transposon RE1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_020366864.1
SIO_010081: LOC109804937
subclass of: SO_0000673
so part of: LOC109804937
location: complement(join(1648413..1649038,1649293..1649629))
location: region:1648413-1649629:-1
so has part: feature:1649293-1649629:-1:exon
so has part: feature:1648413-1649038:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1649293-1649629:-1:exon

position:1649293:-1
position: 1649293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1648413-1649038:-1:exon

position:1649038:-1
position: 1649038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109804937
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804937
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109804937
translation: MTELQALERNQTWTLMKLLLGKHTIGCKWVYRIKHKANDSIKRYKARLVAKGFTQQEGVDYFETFSPVAKFTTVRFLIALASTQNWFLHQLDVDNAFLHGDLEEEVYMRPPQGLEVARFKRGLVLNQRKYCLELIDEVSLLGYKPASTPADPATKLYVDHGTPLEDPSSFKRLIGKLIYLTNTRPNISFAVQHLSQFFACPREPHMQAAMRIIRYLKSAPGTGLFYPAFNSLRIQAFSDSDWATCTTTRRSITGYCVFLGKALISWKSKKQSTVSRSSLEAEYRALAFVTCELQWLKYLCSDLHLRILHLLPHFVNLPSR
SIO_010081: LOC109804937
subclass of: SO_0000673
so part of: LOC109804937
location: complement(join(1648413..1649038,1649293..1649629))
location: region:1648413-1649629:-1
so has part: feature:1649293-1649629:-1:exon
so has part: feature:1648413-1649038:-1:exon

XP_020222453.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1649293-1649629:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1648413-1649038:-1:exon

LOC109804940
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804940
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1667784..1668383
location: region:1667784-1668383:1
so has part: feature:1667784-1668383:1:exon
subclass of: SO_0000010

109804940
type: Gene
SIO_000068: ncbigene

position:1667784:1
position: 1667784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1668383:1
position: 1668383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1667784-1668383:1:exon

LOC109804940
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804940
product: AT-hook motif nuclear-localized protein 17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
transcript id: XM_020366867.1
SIO_010081: LOC109804940
subclass of: SO_0000673
so part of: LOC109804940
location: 1667784..1668383
location: region:1667784-1668383:1
so has part: feature:1667784-1668383:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1667784-1668383:1:exon

LOC109804940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804940
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AT-hook motif nuclear-localized protein 17
translation: MNTNPMMFSSDTDSTVSFQCQPPPSANHSTTASSSNRNPRGRPLGSKNKPKPNTMSITEPSAKIALIHVPQGHNVVESIMDFANREHVSVTILSGSGTIASVTLHHPSRDSTAFTLHGPFALVSFTGTYVYNDHYTLNTGATPPPRMAFGISLCTAHGQVFQGVVGGKVIAGKSLSLTVSTYKNLEIYKCHHEVKQDNN
SIO_010081: LOC109804940
subclass of: SO_0000673
so part of: LOC109804940
location: 1667784..1668383
location: region:1667784-1668383:1
so has part: feature:1667784-1668383:1:exon

XP_020222456.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1667784-1668383:1:exon

LOC109804941
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804941
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1681452..1682990
location: region:1681452-1682990:1
so has part: feature:1681452-1682990:1:exon
subclass of: SO_0000010

109804941
type: Gene
SIO_000068: ncbigene

position:1681452:1
position: 1681452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1682990:1
position: 1682990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1681452-1682990:1:exon

LOC109804941
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804941
product: putative disease resistance RPP13-like protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020366868.2
SIO_010081: LOC109804941
subclass of: SO_0000673
so part of: LOC109804941
location: 1681452..1682990
location: region:1681452-1682990:1
so has part: feature:1681452-1682990:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1681452-1682990:1:exon

LOC109804941
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804941
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative disease resistance RPP13-like protein 1
translation: MAFAMVGEALISASVEILLDRITSSEFRDYFANRKLNVSLLDELKIKLLSLNAVLNDAEEKQITDLAVRAWLDELKDAVLDAEDLLDEINTDSLRSKVEGESKTLTTRVRSLLSSPFNQFYSSINSKLEAISTRLEHFVKHKDILGLQSVSRRVSSRTVTDSLVESVVVAREDDKEKLLRMLLSDEDGKNNHIEVLTILGMGGLGKTTLAQCLYNDNAVQKHFDLTTWAWVSDDFDVFRVTKTIVESVTSKKSDSSNLDALRVELKNNLTDKKFLLVLDDLWNEKYNDWNHLIAPFTSGKKGSKIIVTTRQHRVAQITHTFPICELNRLTDENCWCILAKHAFGNEGFNKYPMLEEIGRKIARKCDGLPLAAKTLGGLLRSVVDVEEWDRILNSNLWAHDDVTPALRISYLHLPAHLKRCFAYCSIFPKQHLLDRKELILLWMAEGFLQQIHGEKSLESVGDECFNKLLSRSLIENDKAKPEEKFRNLN
SIO_010081: LOC109804941
subclass of: SO_0000673
so part of: LOC109804941
location: 1681521..1682990
location: region:1681521-1682990:1
so has part: feature:1681521-1682990:1:exon

XP_020222457.1
type: Protein
SIO_000068: ncbiprotein

position:1681521:1
position: 1681521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1681521-1682990:1:exon

LOC109805343
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109805343
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1685584..1687030
location: region:1685584-1687030:1
so has part: feature:1685584-1687030:1:exon
subclass of: SO_0000010

109805343
type: Gene
SIO_000068: ncbigene

position:1685584:1
position: 1685584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1687030:1
position: 1687030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1685584-1687030:1:exon

LOC109805343
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805343
product: AT-hook motif nuclear-localized protein 17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020367388.2
SIO_010081: LOC109805343
subclass of: SO_0000673
so part of: LOC109805343
location: 1685584..1687030
location: region:1685584-1687030:1
so has part: feature:1685584-1687030:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1685584-1687030:1:exon

LOC109805343
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805343
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AT-hook motif nuclear-localized protein 17
translation: MNTNPMMFSSDTNSTVSFQCQPPPSANHSTIATSSNRNPRGRPMGSKNKPKLNIMSITEPTAMLSLIHVPQGHDVVESIMDYARREHANVTILGGSGTIARVTLHNTSGGSTALTLHGPFTLVSFTGTYVYNDRYTLNTGATPPPHMAFGISLCTARGQLFQGAVGGKVIAGEAVSLTVSTFRNLEIYKCHPEVKDKDKDNGASNLCGVVNLLSF
SIO_010081: LOC109805343
subclass of: SO_0000673
so part of: LOC109805343
location: 1685820..1686467
location: region:1685820-1686467:1
so has part: feature:1685820-1686467:1:exon

XP_020222977.1
type: Protein
SIO_000068: ncbiprotein

position:1685820:1
position: 1685820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1686467:1
position: 1686467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1685820-1686467:1:exon

LOC109804942
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804942
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1708930..>1712170
location: region:1708930-1712170:1
so has part: feature:1708930-1712170:1:exon
subclass of: SO_0000010

109804942
type: Gene
SIO_000068: ncbigene

position:1708930:1
position: 1708930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1712170:1
position: 1712170
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1708930-1712170:1:exon

LOC109804942
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804942
product: putative disease resistance RPP13-like protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029272702.1
SIO_010081: LOC109804942
subclass of: SO_0000673
so part of: LOC109804942
location: join(1708930..1709300,1709729..1710007,1710677..>1712170)
location: region:1708930-1712170:1
so has part: feature:1708930-1709300:1:exon
so has part: feature:1709729-1710007:1:exon
so has part: feature:1710677-1712170:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1708930-1709300:1:exon

position:1709300:1
position: 1709300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1709729-1710007:1:exon

position:1709729:1
position: 1709729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1710007:1
position: 1710007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1710677-1712170:1:exon

position:1710677:1
position: 1710677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109804942
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804942
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative disease resistance RPP13-like protein 1
translation: MAFAMVGEALISASVEILLDRITSSEFRDYFANRKLNVSLLDELKIKLLSLNAVLNDAEEKQITDLAVRAWLDELKDAVLDAEDLLDEINTDSLRSKVELKLQSSDTICITRAEMAFAMVGEALISASVEILLDRITSSEFRDYFANRKLNVSLLDELKIKLLSLNAVLNDAEEKQITDLAVRAWLDELKDAVFNGKFSNSPFNQFYRSINSKLEAISTRLEHFVKHKDILGLQSVSRRVSSRTVKDSLVESVVVAREDDKEKLQRMLLSDEDGKKNHMEVLTILGMGGLGKTTLAQCLYNDNAVQKHFDLTIWAWVSDDFDVFRVTKTIVESVTSKKSDSTNLDALRVELKNNLRDKKFLLVLDDLWNEKYNDWNHLIAPFTSGKKGSKIIVTTRQHRVAQITHTFPICELNRLTDENCWCILAKHAFGNEGFIKYPMLEEIGRKIARKCDGLPLAAKTLGGLLRSIVDVEEWNRILKSNLWAHNDVTPALRISYLHLPAHLKRCFAYCSIFPKQHLLDRKELILLWMAEGFLQQIHGEKSLESAGDECFNELLSRSLIEKDKAITEEKFRMHDLTYDLARLVSGKSSYNFDGDEIPRTTRHLAFLKEYLDVSKRFEGLYELKFVRTFLPQSPYPFGDYLTKRVSHGWLPKLRCLRTLSLSEYRNITELPDSIGNLVLLRYLDLSSTTI
SIO_010081: LOC109804942
subclass of: SO_0000673
so part of: LOC109804942
location: join(1709004..1709300,1709729..1710007,1710677..>1712170)
location: region:1709004-1712170:1
so has part: feature:1709004-1709300:1:exon
so has part: feature:1709729-1710007:1:exon
so has part: feature:1710677-1712170:1:exon

XP_029128535.1
type: Protein
SIO_000068: ncbiprotein

position:1709004:1
position: 1709004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1709004-1709300:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1709729-1710007:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1710677-1712170:1:exon

LOC114916290
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC114916290
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1723869..1730868)
location: region:1723869-1730868:-1
so has part: feature:1723869-1730868:-1:exon
subclass of: SO_0000011

114916290
type: Gene
SIO_000068: ncbigene

position:1723869:-1
position: 1723869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1730868:-1
position: 1730868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1723869-1730868:-1:exon

LOC114916290
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3821
nc RNA class: lncRNA
gene: LOC114916290
product: uncharacterized LOC114916290
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003804672.1
SIO_010081: LOC114916290
subclass of: SO_0000673
so part of: LOC114916290
location: complement(join(1723869..1723970,1724372..1724452,1726679..1726783,1728122..1728271,1730648..1730868))
location: region:1723869-1730868:-1
so has part: feature:1730648-1730868:-1:exon
so has part: feature:1728122-1728271:-1:exon
so has part: feature:1726679-1726783:-1:exon
so has part: feature:1724372-1724452:-1:exon
so has part: feature:1723869-1723970:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1730648-1730868:-1:exon

position:1730648:-1
position: 1730648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1728122-1728271:-1:exon

position:1728122:-1
position: 1728122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1728271:-1
position: 1728271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1726679-1726783:-1:exon

position:1726679:-1
position: 1726679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1726783:-1
position: 1726783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1724372-1724452:-1:exon

position:1724372:-1
position: 1724372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1724452:-1
position: 1724452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1723869-1723970:-1:exon

position:1723970:-1
position: 1723970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109804944
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804944
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1732874..1733632
location: region:1732874-1733632:1
so has part: feature:1732874-1733632:1:exon

109804944
type: Gene
SIO_000068: ncbigene

position:1732874:1
position: 1732874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1733632:1
position: 1733632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1732874-1733632:1:exon

LOC109804944
type: Exon
subclass of: SO_0000147
RO_0002162: 3821
gene: LOC109804944
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC109804944
subclass of: SO_0000673
so part of: LOC109804944
location: 1732874..1732890
location: region:1732874-1732890:1
so has part: feature:1732874-1732890:1:exon

position:1732890:1
position: 1732890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1732874-1732890:1:exon

LOC109804944
type: Exon
subclass of: SO_0000147
RO_0002162: 3821
gene: LOC109804944
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC109804944
subclass of: SO_0000673
so part of: LOC109804944
location: 1732976..1733632
location: region:1732976-1733632:1
so has part: feature:1732976-1733632:1:exon

position:1732976:1
position: 1732976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1732976-1733632:1:exon

LOC109805345
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109805345
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1734903..1735875
location: region:1734903-1735875:1
so has part: feature:1734903-1735875:1:exon
subclass of: SO_0000010

109805345
type: Gene
SIO_000068: ncbigene

position:1734903:1
position: 1734903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1735875:1
position: 1735875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1734903-1735875:1:exon

LOC109805345
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805345
product: FCS-Like Zinc finger 15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_020367390.2
SIO_010081: LOC109805345
subclass of: SO_0000673
so part of: LOC109805345
location: join(1734903..1735241,1735480..1735875)
location: region:1734903-1735875:1
so has part: feature:1734903-1735241:1:exon
so has part: feature:1735480-1735875:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1734903-1735241:1:exon

position:1735241:1
position: 1735241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1735480-1735875:1:exon

position:1735480:1
position: 1735480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109805345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805345
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FCS-Like Zinc finger 15
translation: MLGLSVVLEAQKRSSVSNNKTPQVINKTTMLSTINKHSPSSSIHNISPFQEPTFLDHCFLCNKRLLPGKDIYMYKGDRAFCSVECRCKQIFMDEEESVENEKCYVAAMRPTASGSRHGQKGATN
SIO_010081: LOC109805345
subclass of: SO_0000673
so part of: LOC109805345
location: join(1735018..1735241,1735480..1735630)
location: region:1735018-1735630:1
so has part: feature:1735018-1735241:1:exon
so has part: feature:1735480-1735630:1:exon

XP_020222979.1
type: Protein
SIO_000068: ncbiprotein

position:1735018:1
position: 1735018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1735630:1
position: 1735630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1735018-1735241:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1735480-1735630:1:exon

LOC109805128
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109805128
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1745700..1750576)
location: region:1745700-1750576:-1
so has part: feature:1745700-1750576:-1:exon
subclass of: SO_0000010

109805128
type: Gene
SIO_000068: ncbigene

position:1745700:-1
position: 1745700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1750576:-1
position: 1750576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1745700-1750576:-1:exon

LOC109805128
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805128
product: dynein light chain 2, cytoplasmic
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 81 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_020367113.2
SIO_010081: LOC109805128
subclass of: SO_0000673
so part of: LOC109805128
location: complement(join(1745700..1746020,1749940..1750045,1750170..1750576))
location: region:1745700-1750576:-1
so has part: feature:1750170-1750576:-1:exon
so has part: feature:1749940-1750045:-1:exon
so has part: feature:1745700-1746020:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1750170-1750576:-1:exon

position:1750170:-1
position: 1750170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1749940-1750045:-1:exon

position:1749940:-1
position: 1749940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1750045:-1
position: 1750045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1745700-1746020:-1:exon

position:1746020:-1
position: 1746020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109805128
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805128
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynein light chain 2, cytoplasmic
translation: MNQDAKKNIAGPLTARPDSDDRKPLPLPSTAPPVPPKKVIIKSADMISDMQKEAVDIAVAAFEKYNVEKDVAEQIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG
SIO_010081: LOC109805128
subclass of: SO_0000673
so part of: LOC109805128
location: complement(join(1745938..1746020,1749940..1750045,1750170..1750349))
location: region:1745938-1750349:-1
so has part: feature:1750170-1750349:-1:exon
so has part: feature:1749940-1750045:-1:exon
so has part: feature:1745938-1746020:-1:exon

XP_020222702.1
type: Protein
SIO_000068: ncbiprotein

position:1745938:-1
position: 1745938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1750349:-1
position: 1750349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1750170-1750349:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1749940-1750045:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1745938-1746020:-1:exon

LOC109805129
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109805129
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1752597..1758058)
location: region:1752597-1758058:-1
so has part: feature:1752597-1758058:-1:exon
subclass of: SO_0000010

109805129
type: Gene
SIO_000068: ncbigene

position:1752597:-1
position: 1752597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1758058:-1
position: 1758058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1752597-1758058:-1:exon

LOC109805129
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805129
product: dynein light chain 2, cytoplasmic
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 85 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XM_020367114.2
SIO_010081: LOC109805129
subclass of: SO_0000673
so part of: LOC109805129
location: complement(join(1752597..1752871,1757516..1757621,1757747..1758058))
location: region:1752597-1758058:-1
so has part: feature:1757747-1758058:-1:exon
so has part: feature:1757516-1757621:-1:exon
so has part: feature:1752597-1752871:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1757747-1758058:-1:exon

position:1757747:-1
position: 1757747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1757516-1757621:-1:exon

position:1757516:-1
position: 1757516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1757621:-1
position: 1757621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1752597-1752871:-1:exon

position:1752871:-1
position: 1752871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109805129
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805129
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynein light chain 2, cytoplasmic
translation: MNEDAKKSTPGPLTARPGPDDRKPLSLPSTAPPVPPKKVIIKSADMISDMQKEAVDIAVAAFEKYNVEKDVAEQIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG
SIO_010081: LOC109805129
subclass of: SO_0000673
so part of: LOC109805129
location: complement(join(1752789..1752871,1757516..1757621,1757747..1757926))
location: region:1752789-1757926:-1
so has part: feature:1757747-1757926:-1:exon
so has part: feature:1757516-1757621:-1:exon
so has part: feature:1752789-1752871:-1:exon

XP_020222703.1
type: Protein
SIO_000068: ncbiprotein

position:1752789:-1
position: 1752789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1757926:-1
position: 1757926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1757747-1757926:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1757516-1757621:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1752789-1752871:-1:exon

LOC109805336
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109805336
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1763173..1767337
location: region:1763173-1767337:1
so has part: feature:1763173-1767337:1:exon
subclass of: SO_0000010

109805336
type: Gene
SIO_000068: ncbigene

position:1763173:1
position: 1763173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1767337:1
position: 1767337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1763173-1767337:1:exon

LOC109805336
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805336
product: bidirectional sugar transporter SWEET17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_020367376.2
SIO_010081: LOC109805336
subclass of: SO_0000673
so part of: LOC109805336
location: join(1763173..1763307,1763405..1763441,1763548..1763758,1764054..1764215,1766516..1766635,1766866..1767337)
location: region:1763173-1767337:1
so has part: feature:1763173-1763307:1:exon
so has part: feature:1763405-1763441:1:exon
so has part: feature:1763548-1763758:1:exon
so has part: feature:1764054-1764215:1:exon
so has part: feature:1766516-1766635:1:exon
so has part: feature:1766866-1767337:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1763173-1763307:1:exon

position:1763307:1
position: 1763307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1763405-1763441:1:exon

position:1763405:1
position: 1763405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1763441:1
position: 1763441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1763548-1763758:1:exon

position:1763548:1
position: 1763548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1763758:1
position: 1763758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1764054-1764215:1:exon

position:1764054:1
position: 1764054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1764215:1
position: 1764215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1766516-1766635:1:exon

position:1766516:1
position: 1766516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1766635:1
position: 1766635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1766866-1767337:1:exon

position:1766866:1
position: 1766866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109805336
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805336
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bidirectional sugar transporter SWEET17
translation: MAEPSFFVGVIGNIISILMFLSPVPTFWKIKKHRSTEDFSSLPYICTLLNCSLWTYYGIIKAGEYLVATVNGFGIVVETIYIILFLIYAPKGVRAKACILALLLDVGILAAAIVITQIALHGEARSGAVGIMGAGLNIVMYSSPLSVMKTVVTTKSVKYMPFFLSFFFFLNGGVWLLYAILVRDVILGVPNGTGFFLGAMQLGLYAIYRDGSKRVSNNRLEEGLQHEPLMSQSNNESHQKEEERPI
SIO_010081: LOC109805336
subclass of: SO_0000673
so part of: LOC109805336
location: join(1763274..1763307,1763405..1763441,1763548..1763758,1764054..1764215,1766516..1766635,1766866..1767042)
location: region:1763274-1767042:1
so has part: feature:1763274-1763307:1:exon
so has part: feature:1763405-1763441:1:exon
so has part: feature:1763548-1763758:1:exon
so has part: feature:1764054-1764215:1:exon
so has part: feature:1766516-1766635:1:exon
so has part: feature:1766866-1767042:1:exon

XP_020222965.1
type: Protein
SIO_000068: ncbiprotein

position:1763274:1
position: 1763274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1767042:1
position: 1767042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1763274-1763307:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1763405-1763441:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1763548-1763758:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1764054-1764215:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1766516-1766635:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1766866-1767042:1:exon

LOC109805307
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109805307
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1798382..1805122
location: region:1798382-1805122:1
so has part: feature:1798382-1805122:1:exon
subclass of: SO_0000010

109805307
type: Gene
SIO_000068: ncbigene

position:1798382:1
position: 1798382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1805122:1
position: 1805122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1798382-1805122:1:exon

LOC109805307
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805307
product: mediator of RNA polymerase II transcription subunit 25, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_020367341.2
SIO_010081: LOC109805307
subclass of: SO_0000673
so part of: LOC109805307
location: join(1798382..1798536,1802594..1803273,1803707..1803763,1803949..1803977,1804187..1804261,1804358..1804448,1804588..1804674,1804788..1805122)
location: region:1798382-1805122:1
so has part: feature:1798382-1798536:1:exon
so has part: feature:1802594-1803273:1:exon
so has part: feature:1803707-1803763:1:exon
so has part: feature:1803949-1803977:1:exon
so has part: feature:1804187-1804261:1:exon
so has part: feature:1804358-1804448:1:exon
so has part: feature:1804588-1804674:1:exon
so has part: feature:1804788-1805122:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1798382-1798536:1:exon

position:1798536:1
position: 1798536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1802594-1803273:1:exon

position:1802594:1
position: 1802594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1803273:1
position: 1803273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1803707-1803763:1:exon

position:1803707:1
position: 1803707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1803763:1
position: 1803763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1803949-1803977:1:exon

position:1803949:1
position: 1803949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1803977:1
position: 1803977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1804187-1804261:1:exon

position:1804187:1
position: 1804187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1804261:1
position: 1804261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1804358-1804448:1:exon

position:1804358:1
position: 1804358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1804448:1
position: 1804448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1804588-1804674:1:exon

position:1804588:1
position: 1804588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1804674:1
position: 1804674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1804788-1805122:1:exon

position:1804788:1
position: 1804788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109805307
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805307
product: mediator of RNA polymerase II transcription subunit 25, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_020367342.2
SIO_010081: LOC109805307
subclass of: SO_0000673
so part of: LOC109805307
location: join(1798393..1798536,1802603..1803273,1803707..1803763,1803949..1803977,1804187..1804261,1804358..1804448,1804588..1804674,1804788..1805122)
location: region:1798393-1805122:1
so has part: feature:1798393-1798536:1:exon
so has part: feature:1802603-1803273:1:exon
so has part: feature:1803707-1803763:1:exon
so has part: feature:1803949-1803977:1:exon
so has part: feature:1804187-1804261:1:exon
so has part: feature:1804358-1804448:1:exon
so has part: feature:1804588-1804674:1:exon
so has part: feature:1804788-1805122:1:exon

position:1798393:1
position: 1798393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1798393-1798536:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1802603-1803273:1:exon

position:1802603:1
position: 1802603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1803707-1803763:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1803949-1803977:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1804187-1804261:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1804358-1804448:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1804588-1804674:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1804788-1805122:1:exon

LOC109805307
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805307
product: mediator of RNA polymerase II transcription subunit 25, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_020367344.2
SIO_010081: LOC109805307
subclass of: SO_0000673
so part of: LOC109805307
location: join(1798480..1798617,1802594..1803273,1803707..1803763,1803949..1803977,1804187..1804261,1804358..1804448,1804588..1804674,1804788..1805122)
location: region:1798480-1805122:1
so has part: feature:1798480-1798617:1:exon
so has part: feature:1802594-1803273:1:exon
so has part: feature:1803707-1803763:1:exon
so has part: feature:1803949-1803977:1:exon
so has part: feature:1804187-1804261:1:exon
so has part: feature:1804358-1804448:1:exon
so has part: feature:1804588-1804674:1:exon
so has part: feature:1804788-1805122:1:exon

position:1798480:1
position: 1798480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1798480-1798617:1:exon

position:1798617:1
position: 1798617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1802594-1803273:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1803707-1803763:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1803949-1803977:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1804187-1804261:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1804358-1804448:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1804588-1804674:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1804788-1805122:1:exon

LOC109805307
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805307
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mediator of RNA polymerase II transcription subunit 25 isoform X1
translation: MKVDTGGQSDFIMEGQGEPAQVTMDITAQSVANDIASNSPMVASTSIIGERSSRGQDQELGGNMGVVNPILTLENFSSSGFSFPQPVVASTSATRGLAPELIGNVGVVNPIPTSENNSNSRWQHPSGGNNTIDGLGTHDPLPLDPPQVGASLGNSMFPNSMENSLNQFQSTMLPSFPMLPYSGGASSSSDSHQQFQRHHPFEITELGPLGTPTMRYYAQQKDHRNILHPPPLMDVQGYVKTWEGCLVGRDDYSYRASFNQAGVMIKPTSPSSLTSAWSSRLEIVIFIPKNAVNYTLKIIGGPIDYVFFHTTEFNNLDLYHHLMSKNLCAKIELPTQTIILSTTESKYHFLGIIFPADTIFIELA
SIO_010081: LOC109805307
subclass of: SO_0000673
so part of: LOC109805307
location: join(1798488..1798536,1802594..1803273,1803707..1803763,1803949..1803977,1804187..1804261,1804358..1804448,1804588..1804674,1804788..1804814)
location: region:1798488-1804814:1
so has part: feature:1798488-1798536:1:exon
so has part: feature:1802594-1803273:1:exon
so has part: feature:1803707-1803763:1:exon
so has part: feature:1803949-1803977:1:exon
so has part: feature:1804187-1804261:1:exon
so has part: feature:1804358-1804448:1:exon
so has part: feature:1804588-1804674:1:exon
so has part: feature:1804788-1804814:1:exon

XP_020222930.1
type: Protein
SIO_000068: ncbiprotein

position:1798488:1
position: 1798488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1804814:1
position: 1804814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1798488-1798536:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1802594-1803273:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1803707-1803763:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1803949-1803977:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1804187-1804261:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1804358-1804448:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1804588-1804674:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1804788-1804814:1:exon

LOC109805307
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805307
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mediator of RNA polymerase II transcription subunit 25 isoform X2
translation: MKVDTGGQSDFIMEGQAQVTMDITAQSVANDIASNSPMVASTSIIGERSSRGQDQELGGNMGVVNPILTLENFSSSGFSFPQPVVASTSATRGLAPELIGNVGVVNPIPTSENNSNSRWQHPSGGNNTIDGLGTHDPLPLDPPQVGASLGNSMFPNSMENSLNQFQSTMLPSFPMLPYSGGASSSSDSHQQFQRHHPFEITELGPLGTPTMRYYAQQKDHRNILHPPPLMDVQGYVKTWEGCLVGRDDYSYRASFNQAGVMIKPTSPSSLTSAWSSRLEIVIFIPKNAVNYTLKIIGGPIDYVFFHTTEFNNLDLYHHLMSKNLCAKIELPTQTIILSTTESKYHFLGIIFPADTIFIELA
SIO_010081: LOC109805307
subclass of: SO_0000673
so part of: LOC109805307
location: join(1798488..1798536,1802603..1803273,1803707..1803763,1803949..1803977,1804187..1804261,1804358..1804448,1804588..1804674,1804788..1804814)
location: region:1798488-1804814:1
so has part: feature:1798488-1798536:1:exon
so has part: feature:1802603-1803273:1:exon
so has part: feature:1803707-1803763:1:exon
so has part: feature:1803949-1803977:1:exon
so has part: feature:1804187-1804261:1:exon
so has part: feature:1804358-1804448:1:exon
so has part: feature:1804588-1804674:1:exon
so has part: feature:1804788-1804814:1:exon

XP_020222931.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1798488-1798536:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1802603-1803273:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1803707-1803763:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1803949-1803977:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1804187-1804261:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1804358-1804448:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1804588-1804674:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1804788-1804814:1:exon

LOC109805307
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109805307
product: mediator of RNA polymerase II transcription subunit 25, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_020367343.2
SIO_010081: LOC109805307
subclass of: SO_0000673
so part of: LOC109805307
location: join(1798668..1799308,1802594..1803273,1803707..1803763,1803949..1803977,1804187..1804261,1804358..1804448,1804588..1804674,1804788..1805122)
location: region:1798668-1805122:1
so has part: feature:1798668-1799308:1:exon
so has part: feature:1802594-1803273:1:exon
so has part: feature:1803707-1803763:1:exon
so has part: feature:1803949-1803977:1:exon
so has part: feature:1804187-1804261:1:exon
so has part: feature:1804358-1804448:1:exon
so has part: feature:1804588-1804674:1:exon
so has part: feature:1804788-1805122:1:exon

position:1798668:1
position: 1798668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1798668-1799308:1:exon

position:1799308:1
position: 1799308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1802594-1803273:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1803707-1803763:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1803949-1803977:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1804187-1804261:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1804358-1804448:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1804588-1804674:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1804788-1805122:1:exon

LOC109805307
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805307
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mediator of RNA polymerase II transcription subunit 25 isoform X3
translation: MDITAQSVANDIASNSPMVASTSIIGERSSRGQDQELGGNMGVVNPILTLENFSSSGFSFPQPVVASTSATRGLAPELIGNVGVVNPIPTSENNSNSRWQHPSGGNNTIDGLGTHDPLPLDPPQVGASLGNSMFPNSMENSLNQFQSTMLPSFPMLPYSGGASSSSDSHQQFQRHHPFEITELGPLGTPTMRYYAQQKDHRNILHPPPLMDVQGYVKTWEGCLVGRDDYSYRASFNQAGVMIKPTSPSSLTSAWSSRLEIVIFIPKNAVNYTLKIIGGPIDYVFFHTTEFNNLDLYHHLMSKNLCAKIELPTQTIILSTTESKYHFLGIIFPADTIFIELA
SIO_010081: LOC109805307
subclass of: SO_0000673
so part of: LOC109805307
location: join(1802614..1803273,1803707..1803763,1803949..1803977,1804187..1804261,1804358..1804448,1804588..1804674,1804788..1804814)
location: region:1802614-1804814:1
so has part: feature:1802614-1803273:1:exon
so has part: feature:1803707-1803763:1:exon
so has part: feature:1803949-1803977:1:exon
so has part: feature:1804187-1804261:1:exon
so has part: feature:1804358-1804448:1:exon
so has part: feature:1804588-1804674:1:exon
so has part: feature:1804788-1804814:1:exon

XP_020222932.1
type: Protein
SIO_000068: ncbiprotein

position:1802614:1
position: 1802614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1802614-1803273:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1803707-1803763:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1803949-1803977:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1804187-1804261:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1804358-1804448:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1804588-1804674:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1804788-1804814:1:exon

LOC109805307
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109805307
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mediator of RNA polymerase II transcription subunit 25 isoform X3
translation: MDITAQSVANDIASNSPMVASTSIIGERSSRGQDQELGGNMGVVNPILTLENFSSSGFSFPQPVVASTSATRGLAPELIGNVGVVNPIPTSENNSNSRWQHPSGGNNTIDGLGTHDPLPLDPPQVGASLGNSMFPNSMENSLNQFQSTMLPSFPMLPYSGGASSSSDSHQQFQRHHPFEITELGPLGTPTMRYYAQQKDHRNILHPPPLMDVQGYVKTWEGCLVGRDDYSYRASFNQAGVMIKPTSPSSLTSAWSSRLEIVIFIPKNAVNYTLKIIGGPIDYVFFHTTEFNNLDLYHHLMSKNLCAKIELPTQTIILSTTESKYHFLGIIFPADTIFIELA
SIO_010081: LOC109805307
subclass of: SO_0000673
so part of: LOC109805307
location: join(1802614..1803273,1803707..1803763,1803949..1803977,1804187..1804261,1804358..1804448,1804588..1804674,1804788..1804814)
location: region:1802614-1804814:1
so has part: feature:1802614-1803273:1:exon
so has part: feature:1803707-1803763:1:exon
so has part: feature:1803949-1803977:1:exon
so has part: feature:1804187-1804261:1:exon
so has part: feature:1804358-1804448:1:exon
so has part: feature:1804588-1804674:1:exon
so has part: feature:1804788-1804814:1:exon

XP_020222933.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1802614-1803273:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1803707-1803763:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1803949-1803977:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1804187-1804261:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1804358-1804448:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1804588-1804674:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1804788-1804814:1:exon

LOC109804878
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804878
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1809225..1829815)
location: region:1809225-1829815:-1
so has part: feature:1809225-1829815:-1:exon
subclass of: SO_0000010

109804878
type: Gene
SIO_000068: ncbigene

position:1809225:-1
position: 1809225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1829815:-1
position: 1829815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1809225-1829815:-1:exon

LOC109804878
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109804878
product: vacuolar sorting protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_020366779.2
SIO_010081: LOC109804878
subclass of: SO_0000673
so part of: LOC109804878
location: complement(join(1809225..1809630,1810384..1810554,1811012..1811101,1813433..1813544,1813629..1813697,1814114..1814169,1814359..1814452,1814723..1814914,1817100..1817148,1817415..1817487,1817593..1817865,1820796..1820937,1821249..1821445,1824955..1825230,1828526..1829815))
location: region:1809225-1829815:-1
so has part: feature:1828526-1829815:-1:exon
so has part: feature:1824955-1825230:-1:exon
so has part: feature:1821249-1821445:-1:exon
so has part: feature:1820796-1820937:-1:exon
so has part: feature:1817593-1817865:-1:exon
so has part: feature:1817415-1817487:-1:exon
so has part: feature:1817100-1817148:-1:exon
so has part: feature:1814723-1814914:-1:exon
so has part: feature:1814359-1814452:-1:exon
so has part: feature:1814114-1814169:-1:exon
so has part: feature:1813629-1813697:-1:exon
so has part: feature:1813433-1813544:-1:exon
so has part: feature:1811012-1811101:-1:exon
so has part: feature:1810384-1810554:-1:exon
so has part: feature:1809225-1809630:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1828526-1829815:-1:exon

position:1828526:-1
position: 1828526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1824955-1825230:-1:exon

position:1824955:-1
position: 1824955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1825230:-1
position: 1825230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1821249-1821445:-1:exon

position:1821249:-1
position: 1821249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1821445:-1
position: 1821445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1820796-1820937:-1:exon

position:1820796:-1
position: 1820796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1820937:-1
position: 1820937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1817593-1817865:-1:exon

position:1817593:-1
position: 1817593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1817865:-1
position: 1817865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1817415-1817487:-1:exon

position:1817415:-1
position: 1817415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1817487:-1
position: 1817487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1817100-1817148:-1:exon

position:1817100:-1
position: 1817100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1817148:-1
position: 1817148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1814723-1814914:-1:exon

position:1814723:-1
position: 1814723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1814914:-1
position: 1814914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1814359-1814452:-1:exon

position:1814359:-1
position: 1814359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1814452:-1
position: 1814452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1814114-1814169:-1:exon

position:1814114:-1
position: 1814114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1814169:-1
position: 1814169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1813629-1813697:-1:exon

position:1813629:-1
position: 1813629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1813697:-1
position: 1813697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1813433-1813544:-1:exon

position:1813433:-1
position: 1813433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1813544:-1
position: 1813544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1811012-1811101:-1:exon

position:1811012:-1
position: 1811012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1811101:-1
position: 1811101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1810384-1810554:-1:exon

position:1810384:-1
position: 1810384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1810554:-1
position: 1810554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1809225-1809630:-1:exon

position:1809630:-1
position: 1809630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109804878
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109804878
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar sorting protein 3
translation: MAKVENSMTRVVLEPHAQFDLAAHSRASSIRSLAIATLPNPKRHRTTFLYVGTHSGTLFSLSADSNDNDAAQNDNAVLRKLSFLRSVSVSDAAVESISVIEEFGKVLLLSDGALFLVDSELSNRASKLSFSKGVSLVARRRFRNGESEGLGSGLGSGSGLGLFQKLGGVREVQSEGACVFALVVGKRLILVELVLGNRNGKSERDDGGGGALVALKEIQCVDGVVSAMVWLNDSIIVGTVNGYSLISCVTGQSSVIFSLPDVSRPPRLKLLHKEWRVLLLVDNVGVIVDAHGQPVGGSLVFRYGLDSVGEIDSYVVVVSDGKIELYHKRNGSCVQVLPFGGEGVGRCVVASEEDRGGRLVAVATATKVVCYQKLPSVEQIKGLLRKKNYKGAISLVEELESEGEMSKDLLSFVHAQVGFLLLFDLHFEEAVDHFLLSETMQPSEVFPFIMRDPNRWSLLVPRNRYWGLHPPPAPLEDVIDDGLMTIQRASFLRKAGVETIVDNDLFLNPANRADLLESAIKNISRYLEACREKDLTQSVREGVDTLLMYLYRALNCVEEMERLASSTNWCVVEELEQMLEESGHLQTLAFLCASKGMSSKAVHIWRILARNYSSGLWKDPTLENCTEDSGENLISGRAIAATEASKILEESSDQDLILQHLGWIADISQVLAVKVLTSDKREIQLSPDEVITTIDPQKVEILQRYLQWLIEDQDCNDTQLHTLYGLSLSKSAIEAFESENVSESLDSGNTETRSLDTLKKSIFQIPVRERLQIFLQSSDLYDPEEVLDLIEGSELWFEKAILYRRLGQETLVLQILALKLEDSEAAEQYCAEIGRADAYMQLLEMYLDPQDGKDPMFTAAVRLLHNHGESLDPLQVLEKLSPDMPLQLASETLLRMFRARVHHHRQGQIVHNLSRAVDIDARLSRLEERSRHVQINDESLCDSCNARLGTKLFAMYPDDTVVCYKCYRRQGESVSVSGRNFKEDILIKPGWLVSR
SIO_010081: LOC109804878
subclass of: SO_0000673
so part of: LOC109804878
location: complement(join(1809538..1809630,1810384..1810554,1811012..1811101,1813433..1813544,1813629..1813697,1814114..1814169,1814359..1814452,1814723..1814914,1817100..1817148,1817415..1817487,1817593..1817865,1820796..1820937,1821249..1821445,1824955..1825230,1828526..1829626))
location: region:1809538-1829626:-1
so has part: feature:1828526-1829626:-1:exon
so has part: feature:1824955-1825230:-1:exon
so has part: feature:1821249-1821445:-1:exon
so has part: feature:1820796-1820937:-1:exon
so has part: feature:1817593-1817865:-1:exon
so has part: feature:1817415-1817487:-1:exon
so has part: feature:1817100-1817148:-1:exon
so has part: feature:1814723-1814914:-1:exon
so has part: feature:1814359-1814452:-1:exon
so has part: feature:1814114-1814169:-1:exon
so has part: feature:1813629-1813697:-1:exon
so has part: feature:1813433-1813544:-1:exon
so has part: feature:1811012-1811101:-1:exon
so has part: feature:1810384-1810554:-1:exon
so has part: feature:1809538-1809630:-1:exon

XP_020222368.1
type: Protein
SIO_000068: ncbiprotein

position:1809538:-1
position: 1809538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1829626:-1
position: 1829626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1828526-1829626:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1824955-1825230:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1821249-1821445:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1820796-1820937:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1817593-1817865:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1817415-1817487:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1817100-1817148:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1814723-1814914:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1814359-1814452:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1814114-1814169:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1813629-1813697:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1813433-1813544:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1811012-1811101:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1810384-1810554:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1809538-1809630:-1:exon

LOC109804849
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109804849
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1835102..1845519)
location: region:1835102-1845519:-1
so has part: feature:1835102-1845519:-1:exon
subclass of: SO_0000010

109804849
type: Gene
SIO_000068: ncbigene