Cajanus cajan chromosome 4, C.cajan_V1.0, whole genome shotgun sequence.
type: Entry
definition: Cajanus cajan chromosome 4, C.cajan_V1.0, whole genome shotgun sequence.
sequence version: NC_033807.1
sequence date: 2019-05-23
sequence: sequence
division: CON
label: NC_033807.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA376605
dblink: SAMN02981370
keyword: WGS
keyword: RefSeq
source: Cajanus cajan (pigeon pea)
organism: Cajanus cajan
taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus.
reference: 1
references: 22057054
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM003606.1.\nAssembly name: C.cajan_V1.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the BGI on 2016/03/30. The\noriginal whole-genome shotgun project has the accession\nAGCT00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: BGI\nAssembly Method :: SOAPdenovo v. 1.05\nAssembly Name :: C.cajan_V1.0\nGenome Coverage :: 160x\nSequencing Technology :: Illumina Hiseq2000\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Cajanus cajan Annotation Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 12502730
topology: linear
so has quality: SO_0000987
location: 1..12502730
location: region:1-12502730:1
RO_0002162: 3821

NC_033807
type: RefSeq
SIO_000068: refseq

PRJNA376605
type: BioProject
SIO_000068: bioproject

SAMN02981370
type: BioSample
SIO_000068: biosample

1
title: Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop of resource-poor farmers
author: Varshney, R.K.
author: Chen, W.
author: Li, Y.
author: Bharti, A.K.
author: Saxena, R.K.
author: Schlueter, J.A.
author: Donoghue, M.T.
author: Azam, S.
author: Fan, G.
author: Whaley, A.M.
author: Farmer, A.D.
author: Sheridan, J.
author: Iwata, A.
author: Tuteja, R.
author: Penmetsa, R.V.
author: Wu, W.
author: Upadhyaya, H.D.
author: Yang, S.P.
author: Shah, T.
author: Saxena, K.B.
author: Michael, T.
author: McCombie, W.R.
author: Yang, B.
author: Zhang, G.
author: Yang, H.
author: Wang, J.
author: Spillane, C.
author: Cook, D.R.
author: May, G.D.
author: Xu, X.
author: Jackson, S.A.
journal: Nat. Biotechnol.
volume: 30
issue: 1
pages: 83-89
year: 2012
pubmed: 22057054
comments: Publication Status: Online-Only

22057054
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12502730:1
position: 12502730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-12502730:1:source
so part of: sequence
organism: Cajanus cajan
mol type: genomic DNA
bio material: ICRISAT:ICPL 87119
chromosome: 4

3821
type: Taxonomy
SIO_000068: taxonomy

LOC109799307
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109799307
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10192..20088
location: region:10192-20088:1
so has part: feature:10192-20088:1:exon
subclass of: SO_0000011

109799307
type: Gene
SIO_000068: ncbigene

position:10192:1
position: 10192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20088:1
position: 20088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10192-20088:1:exon

LOC109799307
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3821
nc RNA class: lncRNA
gene: LOC109799307
product: uncharacterized LOC109799307
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XR_002239852.1
SIO_010081: LOC109799307
subclass of: SO_0000673
so part of: LOC109799307
location: join(10192..10218,10413..10520,16561..16565,20077..20088)
location: region:10192-20088:1
so has part: feature:10192-10218:1:exon
so has part: feature:10413-10520:1:exon
so has part: feature:16561-16565:1:exon
so has part: feature:20077-20088:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10192-10218:1:exon

position:10218:1
position: 10218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10413-10520:1:exon

position:10413:1
position: 10413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10520:1
position: 10520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:16561-16565:1:exon

position:16561:1
position: 16561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16565:1
position: 16565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:20077-20088:1:exon

position:20077:1
position: 20077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109798925
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798925
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 43006..48255
location: region:43006-48255:1
so has part: feature:43006-48255:1:exon
subclass of: SO_0000010

109798925
type: Gene
SIO_000068: ncbigene

position:43006:1
position: 43006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48255:1
position: 48255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43006-48255:1:exon

LOC109798925
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798925
product: LRR receptor-like serine/threonine-protein kinase RPK2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_029271243.1
SIO_010081: LOC109798925
subclass of: SO_0000673
so part of: LOC109798925
location: join(43006..43448,43842..46848,47698..48255)
location: region:43006-48255:1
so has part: feature:43006-43448:1:exon
so has part: feature:43842-46848:1:exon
so has part: feature:47698-48255:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:43006-43448:1:exon

position:43448:1
position: 43448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:43842-46848:1:exon

position:43842:1
position: 43842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46848:1
position: 46848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:47698-48255:1:exon

position:47698:1
position: 47698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109798925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798925
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LRR receptor-like serine/threonine-protein kinase RPK2
translation: MDLLFLLRCLLFFFFTSHLANALNATCPDALSLLSFKRFVSSDPSNLLAGWTNRTSPTLCRWRGVACGGAILSGRVTALNLTGLRGGELAPSLGDLSELRVLSLAGNMFSGEIPASLGNLRFLEVLELQGNNFSGRISDKMSFTFLRCLRFVNLSGNAFSGSLPSEMIGSGSVKIVDLSNNQFSGVILLNGSCDSLKHLKLSHNFLTGEIPPQIGKCRNLRTLLVDGNILEGRIPSEIGGVVELRVLDVSRNSLTGRVPKELANCVKLSVLVLTDLFEDHSEGGLEDGFRGEFNAFVGNIPHEVLLLSSLRVLWAPRANLGGRLPSGWSDLCSLRVLNLAQNYVTGVVPERLGMCRNLSFLDLSSNNLVGYLPTLQLQVPCMMYFNISRYNISGTLAGFRKERCQVSALELDGFNDDAYFDIPVWSFQKNALIGSGFEETSTVVVSHDFSWNSFVGSLPLFSLGDNLFSANHKVSYALSLNNNKFNGTLPYQLVSNCNELKTLSVNLSVNQLSGGNSQASILGCLKLTDFEAAYNQIDGSIGPGIGDLVMLQHLDLSGNKLSGSLPNQLGNLQNMKWMLLGGNNLTGVIPSQLSQLTSLAVLNLSHNALVGTIPTSLSNAKSLEILLLDHNNLSGEIPLSFSTLSNLVQLDVSFNNLSGHIPHLQHHNCDSYKGNEHLHSCPDPYSDSPASLPEPLEIQHTHKQRKFRTLVIAVVTSASVTLCTLLGIVLVIFSGRSKFGRLSSIRRRQVVTFQDVPTELSYDSVAMATGNFSIRFLIGTGGFGSTYKAELSPGFLVAIKRLSIGRFQGIQQFETEIRTLGRIRHKNLVTLIGYYVGKAEMFLIYNYLSGGNLEAFIHDRSGKNVQWPVIYKIAKDIAEALAYLHYSCVPRIVHRDIKPSNILLDEDLNAYISDFGLARLLEVSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELMSGRKSLDPSFSEYGNGFNIVPWAELLMTEGRCSELFSSTLWESGPKEKLLGLLKLALTCTEETLSIRPSMKQVLEKLKQLKS
SIO_010081: LOC109798925
subclass of: SO_0000673
so part of: LOC109798925
location: join(43239..43448,43842..46778)
location: region:43239-46778:1
so has part: feature:43239-43448:1:exon
so has part: feature:43842-46778:1:exon

XP_029127076.1
type: Protein
SIO_000068: ncbiprotein

position:43239:1
position: 43239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46778:1
position: 46778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43239-43448:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:43842-46778:1:exon

LOC109798733
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798733
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(52216..62270)
location: region:52216-62270:-1
so has part: feature:52216-62270:-1:exon
subclass of: SO_0000010

109798733
type: Gene
SIO_000068: ncbigene

position:52216:-1
position: 52216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62270:-1
position: 62270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52216-62270:-1:exon

LOC109798733
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798733
product: uncharacterized LOC109798733
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_020359110.2
SIO_010081: LOC109798733
subclass of: SO_0000673
so part of: LOC109798733
location: complement(join(52216..52746,52912..53022,53182..53241,56699..56816,57138..57238,57327..57398,57514..57601,57669..57737,58363..58500,58798..58910,59874..59945,60043..60147,61146..61259,61339..61433,61757..62270))
location: region:52216-62270:-1
so has part: feature:61757-62270:-1:exon
so has part: feature:61339-61433:-1:exon
so has part: feature:61146-61259:-1:exon
so has part: feature:60043-60147:-1:exon
so has part: feature:59874-59945:-1:exon
so has part: feature:58798-58910:-1:exon
so has part: feature:58363-58500:-1:exon
so has part: feature:57669-57737:-1:exon
so has part: feature:57514-57601:-1:exon
so has part: feature:57327-57398:-1:exon
so has part: feature:57138-57238:-1:exon
so has part: feature:56699-56816:-1:exon
so has part: feature:53182-53241:-1:exon
so has part: feature:52912-53022:-1:exon
so has part: feature:52216-52746:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:61757-62270:-1:exon

position:61757:-1
position: 61757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:61339-61433:-1:exon

position:61339:-1
position: 61339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61433:-1
position: 61433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:61146-61259:-1:exon

position:61146:-1
position: 61146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61259:-1
position: 61259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:60043-60147:-1:exon

position:60043:-1
position: 60043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60147:-1
position: 60147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:59874-59945:-1:exon

position:59874:-1
position: 59874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59945:-1
position: 59945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:58798-58910:-1:exon

position:58798:-1
position: 58798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58910:-1
position: 58910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:58363-58500:-1:exon

position:58363:-1
position: 58363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58500:-1
position: 58500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:57669-57737:-1:exon

position:57669:-1
position: 57669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57737:-1
position: 57737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:57514-57601:-1:exon

position:57514:-1
position: 57514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57601:-1
position: 57601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:57327-57398:-1:exon

position:57327:-1
position: 57327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57398:-1
position: 57398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:57138-57238:-1:exon

position:57138:-1
position: 57138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57238:-1
position: 57238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:56699-56816:-1:exon

position:56699:-1
position: 56699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56816:-1
position: 56816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:53182-53241:-1:exon

position:53182:-1
position: 53182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53241:-1
position: 53241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:52912-53022:-1:exon

position:52912:-1
position: 52912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53022:-1
position: 53022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:52216-52746:-1:exon

position:52746:-1
position: 52746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109798733
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798733
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109798733
translation: MAHLQGVDRKKGDVIRLERESVIPILKPKLIMTLANLIEHSSDRGEFLKLCKRIEYTIRAWYLLQFEDLMQLYSLFDPVHGAQKLEQQKLAPEEIDVLEQNFLTYLFQVMEKSNFKIVTDDEIDVAHSGQYLLNLPITVDESKLDKKLLKKYFEEHHHDDLPDFSDKYVIFRRGIGIDRTTDYFVMEKVDMLIGRFWAYLLRLTRLEKLLSRSKRHKHNKKDPKKDNEIISESNGNEFYVERIRLENMQLSFRNLLGKTLIQEPTFDRIIVVYRRANTKSKEDRGIFVKHFKNIPMADMEIVLPEKKNPGLTPMDWVKFLGSAVVGLVAVVSSLEMPTADWWVIIAVLSTVIGYCAKTYFTFQQNLAQYQNLITQSMYDKQLDSGKGTLLHLCDDVIQQEVKEVIVSFFILMEQGKATRQDLDQWCEELIKEEFNEECNFDVDDAVQKLENLGIVTRDSVGRYQCVGLRRANDIIGTTTEELVLKAKQGNFTP
SIO_010081: LOC109798733
subclass of: SO_0000673
so part of: LOC109798733
location: complement(join(52636..52746,52912..53022,53182..53241,56699..56816,57138..57238,57327..57398,57514..57601,57669..57737,58363..58500,58798..58910,59874..59945,60043..60147,61146..61259,61339..61433,61757..61871))
location: region:52636-61871:-1
so has part: feature:61757-61871:-1:exon
so has part: feature:61339-61433:-1:exon
so has part: feature:61146-61259:-1:exon
so has part: feature:60043-60147:-1:exon
so has part: feature:59874-59945:-1:exon
so has part: feature:58798-58910:-1:exon
so has part: feature:58363-58500:-1:exon
so has part: feature:57669-57737:-1:exon
so has part: feature:57514-57601:-1:exon
so has part: feature:57327-57398:-1:exon
so has part: feature:57138-57238:-1:exon
so has part: feature:56699-56816:-1:exon
so has part: feature:53182-53241:-1:exon
so has part: feature:52912-53022:-1:exon
so has part: feature:52636-52746:-1:exon

XP_020214699.1
type: Protein
SIO_000068: ncbiprotein

position:52636:-1
position: 52636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61871:-1
position: 61871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61757-61871:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:61339-61433:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:61146-61259:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:60043-60147:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:59874-59945:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:58798-58910:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:58363-58500:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:57669-57737:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:57514-57601:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:57327-57398:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:57138-57238:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:56699-56816:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:53182-53241:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:52912-53022:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:52636-52746:-1:exon

LOC109798761
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798761
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(64520..67267)
location: region:64520-67267:-1
so has part: feature:64520-67267:-1:exon
subclass of: SO_0000010

109798761
type: Gene
SIO_000068: ncbigene

position:64520:-1
position: 64520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67267:-1
position: 67267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64520-67267:-1:exon

LOC109798761
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798761
product: cytochrome b-c1 complex subunit Rieske-4, mitochondrial
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XM_020359148.2
SIO_010081: LOC109798761
subclass of: SO_0000673
so part of: LOC109798761
location: complement(join(64520..65448,66963..67267))
location: region:64520-67267:-1
so has part: feature:66963-67267:-1:exon
so has part: feature:64520-65448:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:66963-67267:-1:exon

position:66963:-1
position: 66963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:64520-65448:-1:exon

position:65448:-1
position: 65448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109798761
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798761
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome b-c1 complex subunit Rieske-4, mitochondrial
translation: MLRLAAKRLSSLSSTPSRANHAAAAFLSRSPAAPPSEERRSDPFSPRPQFFLPIRGFATETLIHTKENSIIPEIPATVSAVKNPSSKIVYDEHNHERFPPGDPSKRAFAYFVLSGGRFIYASLVRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDIKLANTVDVGSLRDPQQDAERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG
SIO_010081: LOC109798761
subclass of: SO_0000673
so part of: LOC109798761
location: complement(join(64805..65448,66963..67128))
location: region:64805-67128:-1
so has part: feature:66963-67128:-1:exon
so has part: feature:64805-65448:-1:exon

XP_020214737.1
type: Protein
SIO_000068: ncbiprotein

position:64805:-1
position: 64805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67128:-1
position: 67128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66963-67128:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:64805-65448:-1:exon

TRNAK-UUU
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: TRNAK-UUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 82114..82186
location: region:82114-82186:1
so has part: feature:82114-82186:1:exon
subclass of: SO_0000663

109799317
type: Gene
SIO_000068: ncbigene

position:82114:1
position: 82114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82186:1
position: 82186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82114-82186:1:exon

TRNAK-UUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3821
gene: TRNAK-UUU
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA lysine (anticodon UUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:82147..82149,aa:Lys,seq:ttt)
SIO_010081: TRNAK-UUU
subclass of: SO_0000673
so part of: TRNAK-UUU
location: 82114..82186
location: region:82114-82186:1
so has part: feature:82114-82186:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:82114-82186:1:exon

LOC109798432
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798432
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(111062..113019)
location: region:111062-113019:-1
so has part: feature:111062-113019:-1:exon
subclass of: SO_0000010

109798432
type: Gene
SIO_000068: ncbigene

position:111062:-1
position: 111062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113019:-1
position: 113019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111062-113019:-1:exon

LOC109798432
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798432
product: pentatricopeptide repeat-containing protein At5g47360
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020358708.2
SIO_010081: LOC109798432
subclass of: SO_0000673
so part of: LOC109798432
location: complement(111062..113019)
location: region:111062-113019:-1
so has part: feature:111062-113019:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:111062-113019:-1:exon

LOC109798432
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798432
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g47360
translation: MLVATGNTPLSLSLSLSLCQTKSLTSSPQPPSRSAYTLSASVFSFLDPHPFHLNPMSHFVNFRLFSLFHTVKTLPFSTHQTGTVDTLCTHLHQSNGSFENSLSKVKPKLNSQCVIQVLNSCHPKQPQLGVRFFVWAGFQSGYRHSAYMYTKACNLLGIRHNPHIIRDVVRSYEAEGCLVTVNMFREVLKLCKEAQLADVALWVLRKMQYSFNLHADTVMYNVVIRLCCKKGDIQMAEKLTREMSFNGLCPDLITYMAIVEGLCHAGRSEDAYSVLKVMRVHGCSPNLVILSAILDGMCRSGSMDRALELLDEMEKGGDCTPNVVTYTSVIQSFCKRGQWTEALDILDRMRALGCNANHVTVFTFVESLCAEGRVEEAYELMDKFAVEHGVSYGDCYSSLVISLIRIKKLEEAEKLFKEMLAGDVKLDTLASSLLLKELSVKDRVLDGFYLLEAIENKGCLSSIDSDIYSILLIGLCQRSHLTEATKLTKIMLKRSVLLQPPYKDDVIDILLKSGXKRSCEPVDWHT
SIO_010081: LOC109798432
subclass of: SO_0000673
so part of: LOC109798432
location: complement(111399..112978)
location: region:111399-112978:-1
so has part: feature:111399-112978:-1:exon

XP_020214297.1
type: Protein
SIO_000068: ncbiprotein

position:111399:-1
position: 111399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112978:-1
position: 112978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111399-112978:-1:exon

LOC109798431
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798431
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 113120..128905
location: region:113120-128905:1
so has part: feature:113120-128905:1:exon
subclass of: SO_0000010

109798431
type: Gene
SIO_000068: ncbigene

position:113120:1
position: 113120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128905:1
position: 128905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113120-128905:1:exon

LOC109798431
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798431
product: phosphoinositide phosphatase SAC1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_020358707.2
SIO_010081: LOC109798431
subclass of: SO_0000673
so part of: LOC109798431
location: join(113120..113341,113416..113620,113725..113890,113972..114197,115723..115799,118328..118360,119673..119860,119972..120069,121478..121611,121726..121857,123749..124130,124252..124373,124875..125087,126241..126420,127066..127177,128411..128905)
location: region:113120-128905:1
so has part: feature:113120-113341:1:exon
so has part: feature:113416-113620:1:exon
so has part: feature:113725-113890:1:exon
so has part: feature:113972-114197:1:exon
so has part: feature:115723-115799:1:exon
so has part: feature:118328-118360:1:exon
so has part: feature:119673-119860:1:exon
so has part: feature:119972-120069:1:exon
so has part: feature:121478-121611:1:exon
so has part: feature:121726-121857:1:exon
so has part: feature:123749-124130:1:exon
so has part: feature:124252-124373:1:exon
so has part: feature:124875-125087:1:exon
so has part: feature:126241-126420:1:exon
so has part: feature:127066-127177:1:exon
so has part: feature:128411-128905:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:113120-113341:1:exon

position:113341:1
position: 113341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:113416-113620:1:exon

position:113416:1
position: 113416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113620:1
position: 113620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:113725-113890:1:exon

position:113725:1
position: 113725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113890:1
position: 113890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:113972-114197:1:exon

position:113972:1
position: 113972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114197:1
position: 114197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:115723-115799:1:exon

position:115723:1
position: 115723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115799:1
position: 115799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:118328-118360:1:exon

position:118328:1
position: 118328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118360:1
position: 118360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:119673-119860:1:exon

position:119673:1
position: 119673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119860:1
position: 119860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:119972-120069:1:exon

position:119972:1
position: 119972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120069:1
position: 120069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:121478-121611:1:exon

position:121478:1
position: 121478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121611:1
position: 121611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:121726-121857:1:exon

position:121726:1
position: 121726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121857:1
position: 121857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:123749-124130:1:exon

position:123749:1
position: 123749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124130:1
position: 124130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:124252-124373:1:exon

position:124252:1
position: 124252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124373:1
position: 124373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:124875-125087:1:exon

position:124875:1
position: 124875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125087:1
position: 125087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:126241-126420:1:exon

position:126241:1
position: 126241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126420:1
position: 126420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:127066-127177:1:exon

position:127066:1
position: 127066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127177:1
position: 127177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:128411-128905:1:exon

position:128411:1
position: 128411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109798431
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798431
product: phosphoinositide phosphatase SAC1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_020358705.2
SIO_010081: LOC109798431
subclass of: SO_0000673
so part of: LOC109798431
location: join(113121..113341,113416..113620,113725..113890,113972..114197,115723..115799,118328..118360,119673..119860,119972..120069,121478..121611,121726..121857,123749..124130,124252..124373,124563..124673,124875..125087,126241..126420,127066..127177,128411..128905)
location: region:113121-128905:1
so has part: feature:113121-113341:1:exon
so has part: feature:113416-113620:1:exon
so has part: feature:113725-113890:1:exon
so has part: feature:113972-114197:1:exon
so has part: feature:115723-115799:1:exon
so has part: feature:118328-118360:1:exon
so has part: feature:119673-119860:1:exon
so has part: feature:119972-120069:1:exon
so has part: feature:121478-121611:1:exon
so has part: feature:121726-121857:1:exon
so has part: feature:123749-124130:1:exon
so has part: feature:124252-124373:1:exon
so has part: feature:124563-124673:1:exon
so has part: feature:124875-125087:1:exon
so has part: feature:126241-126420:1:exon
so has part: feature:127066-127177:1:exon
so has part: feature:128411-128905:1:exon

position:113121:1
position: 113121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113121-113341:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:113416-113620:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:113725-113890:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:113972-114197:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:115723-115799:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:118328-118360:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:119673-119860:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:119972-120069:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:121478-121611:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:121726-121857:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:123749-124130:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:124252-124373:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:124563-124673:1:exon

position:124563:1
position: 124563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124673:1
position: 124673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:124875-125087:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:126241-126420:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:127066-127177:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:128411-128905:1:exon

LOC109798431
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798431
product: phosphoinositide phosphatase SAC1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_020358706.1
SIO_010081: LOC109798431
subclass of: SO_0000673
so part of: LOC109798431
location: join(113201..113341,113416..113620,113725..113890,113972..114197,115723..115799,119673..119860,119972..120069,121478..121611,121726..121857,123749..124130,124252..124373,124563..124673,124875..125087,126241..126420,127066..127177,128411..128659)
location: region:113201-128659:1
so has part: feature:113201-113341:1:exon
so has part: feature:113416-113620:1:exon
so has part: feature:113725-113890:1:exon
so has part: feature:113972-114197:1:exon
so has part: feature:115723-115799:1:exon
so has part: feature:119673-119860:1:exon
so has part: feature:119972-120069:1:exon
so has part: feature:121478-121611:1:exon
so has part: feature:121726-121857:1:exon
so has part: feature:123749-124130:1:exon
so has part: feature:124252-124373:1:exon
so has part: feature:124563-124673:1:exon
so has part: feature:124875-125087:1:exon
so has part: feature:126241-126420:1:exon
so has part: feature:127066-127177:1:exon
so has part: feature:128411-128659:1:exon

position:113201:1
position: 113201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128659:1
position: 128659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113201-113341:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:113416-113620:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:113725-113890:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:113972-114197:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:115723-115799:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:119673-119860:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:119972-120069:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:121478-121611:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:121726-121857:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:123749-124130:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:124252-124373:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:124563-124673:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:124875-125087:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:126241-126420:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:127066-127177:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:128411-128659:1:exon

LOC109798431
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798431
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoinositide phosphatase SAC1 isoform X1
translation: MAKSGNKNMGSTSVSVSASAKVHPSNDPELDPDSYALEKFRLYETRARFYLIGSDRNKRFFRVLKIDRSEPSDLNISQDPVLYSPQEIKSLLQRIAEGNRATGGLTFVAKVFGIAGCIKFLESYYLILVTKRRQIGSICGHAIYSIKESQLITVPHVSIQSDLAHSKTELRYKKLLSSVDLTKDFFFSYTYPIMQSLQKNVSPCQDGGGMSYDNIFVWNAYLTQTIRSRCNNTIWTIALVHGHFRQIRLSIFGRDFSVSLISRRSRHFAGTREGLKEEELKTSYLKRGVNDRGRVANDVETEQIVLDEEAGSCKGKMSSVVQMRGSIPLFWSQEASRFSPKPDIILQRYDPTYQATKLHFEDLAKRYGNPIIVLNLIKTVEKRPREMMLRREFASAVGYLNQILPVENHLTFIQWDFHKFAKSKSANVLAVLGAVASEALDLTGFYYSGKPSIIKRANKSNRTSTGRDTSLRDLRASSGDLRIGNSNEMLNSVVNRDRETDMNHQNTKDNFSSDAPHFQSGVLRTNCIDCLDRTNVAQYAYGLQALGRQLHAMGLTDMPKVDPYSSIAAALMDMYQSMGDALAQQYGGSAAHNTVFPERQGKWKATTQSREFLKSIKRYYSNAYTDGEKQDAINLFLGYFQPQEGKPALWELDSDYYLHVSGIGDDLIPERCSEPNLKPSGRGGTVFTPIPACREDFSRIKLTSFDKLIEKTCSTIKNVRLCCEPDQRPGGGSGNSGVAPDAAEIQLKSPNWLFGQRKYEEGSSASKVASRETDVEGSHANGFCDLNWLSSGNDMNEEDVFQRYLTMTSTNEANGWYGGSLLGDQDESSEIYKHYAELCQGPALELFQNDPEREQHYAGALSTSSYEIVNDATVAAEMEAALKEYDQVGSDLGIIPMSCKFFADDPSWLTRWLTGEEKVPRL
SIO_010081: LOC109798431
subclass of: SO_0000673
so part of: LOC109798431
location: join(113201..113341,113416..113620,113725..113890,113972..114197,115723..115799,118328..118360,119673..119860,119972..120069,121478..121611,121726..121857,123749..124130,124252..124373,124563..124673,124875..125087,126241..126420,127066..127177,128411..128659)
location: region:113201-128659:1
so has part: feature:113201-113341:1:exon
so has part: feature:113416-113620:1:exon
so has part: feature:113725-113890:1:exon
so has part: feature:113972-114197:1:exon
so has part: feature:115723-115799:1:exon
so has part: feature:118328-118360:1:exon
so has part: feature:119673-119860:1:exon
so has part: feature:119972-120069:1:exon
so has part: feature:121478-121611:1:exon
so has part: feature:121726-121857:1:exon
so has part: feature:123749-124130:1:exon
so has part: feature:124252-124373:1:exon
so has part: feature:124563-124673:1:exon
so has part: feature:124875-125087:1:exon
so has part: feature:126241-126420:1:exon
so has part: feature:127066-127177:1:exon
so has part: feature:128411-128659:1:exon

XP_020214294.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113201-113341:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:113416-113620:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:113725-113890:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:113972-114197:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:115723-115799:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:118328-118360:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:119673-119860:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:119972-120069:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:121478-121611:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:121726-121857:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:123749-124130:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:124252-124373:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:124563-124673:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:124875-125087:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:126241-126420:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:127066-127177:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:128411-128659:1:exon

LOC109798431
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798431
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoinositide phosphatase SAC1 isoform X3
translation: MAKSGNKNMGSTSVSVSASAKVHPSNDPELDPDSYALEKFRLYETRARFYLIGSDRNKRFFRVLKIDRSEPSDLNISQDPVLYSPQEIKSLLQRIAEGNRATGGLTFVAKVFGIAGCIKFLESYYLILVTKRRQIGSICGHAIYSIKESQLITVPHVSIQSDLAHSKTELRYKKLLSSVDLTKDFFFSYTYPIMQSLQKNVSPCQDGGGMSYDNIFVWNAYLTQTIRSRCNNTIWTIALVHGHFRQIRLSIFGRDFSVSLISRRSRHFAGTREGLKEEELKTSYLKRGVNDRGRVANDVETEQIVLDEEAGSCKGKMSSVVQMRGSIPLFWSQEASRFSPKPDIILQRYDPTYQATKLHFEDLAKRYGNPIIVLNLIKTVEKRPREMMLRREFASAVGYLNQILPVENHLTFIQWDFHKFAKSKSANVLAVLGAVASEALDLTGFYYSGKPSIIKRANKSNRTSTGRDTSLRDLRASSGDLRIGNSNEMLNSVVNRDRETDMNHQNTKDNFSSDAPHFQSGVLRTNCIDCLDRTNVAQYAYGLQALGRQLHAMGLTDMPKVDPYSSIAAALMDMYQSMGDALAQQYGGSAAHNTVFPERQGKWKATTQSREFLKSIKRYYSNAYTDGEKQDAINFSEPNLKPSGRGGTVFTPIPACREDFSRIKLTSFDKLIEKTCSTIKNVRLCCEPDQRPGGGSGNSGVAPDAAEIQLKSPNWLFGQRKYEEGSSASKVASRETDVEGSHANGFCDLNWLSSGNDMNEEDVFQRYLTMTSTNEANGWYGGSLLGDQDESSEIYKHYAELCQGPALELFQNDPEREQHYAGALSTSSYEIVNDATVAAEMEAALKEYDQVGSDLGIIPMSCKFFADDPSWLTRWLTGEEKVPRL
SIO_010081: LOC109798431
subclass of: SO_0000673
so part of: LOC109798431
location: join(113201..113341,113416..113620,113725..113890,113972..114197,115723..115799,118328..118360,119673..119860,119972..120069,121478..121611,121726..121857,123749..124130,124252..124373,124875..125087,126241..126420,127066..127177,128411..128659)
location: region:113201-128659:1
so has part: feature:113201-113341:1:exon
so has part: feature:113416-113620:1:exon
so has part: feature:113725-113890:1:exon
so has part: feature:113972-114197:1:exon
so has part: feature:115723-115799:1:exon
so has part: feature:118328-118360:1:exon
so has part: feature:119673-119860:1:exon
so has part: feature:119972-120069:1:exon
so has part: feature:121478-121611:1:exon
so has part: feature:121726-121857:1:exon
so has part: feature:123749-124130:1:exon
so has part: feature:124252-124373:1:exon
so has part: feature:124875-125087:1:exon
so has part: feature:126241-126420:1:exon
so has part: feature:127066-127177:1:exon
so has part: feature:128411-128659:1:exon

XP_020214296.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113201-113341:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:113416-113620:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:113725-113890:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:113972-114197:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:115723-115799:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:118328-118360:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:119673-119860:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:119972-120069:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:121478-121611:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:121726-121857:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:123749-124130:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:124252-124373:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:124875-125087:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:126241-126420:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:127066-127177:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:128411-128659:1:exon

LOC109798431
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798431
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoinositide phosphatase SAC1 isoform X2
translation: MAKSGNKNMGSTSVSVSASAKVHPSNDPELDPDSYALEKFRLYETRARFYLIGSDRNKRFFRVLKIDRSEPSDLNISQDPVLYSPQEIKSLLQRIAEGNRATGGLTFVAKVFGIAGCIKFLESYYLILVTKRRQIGSICGHAIYSIKESQLITVPHVSIQSDLAHSKTELRYKKLLSSVDLTKDFFFSYTYPIMQSLQKNVSPCQDGGGMSYDNIFVWNAYLTQTIRSRCNNTIWTIALVHGHFRQIRLSIFGRDFSVSLISRRSRHFAGTRYLKRGVNDRGRVANDVETEQIVLDEEAGSCKGKMSSVVQMRGSIPLFWSQEASRFSPKPDIILQRYDPTYQATKLHFEDLAKRYGNPIIVLNLIKTVEKRPREMMLRREFASAVGYLNQILPVENHLTFIQWDFHKFAKSKSANVLAVLGAVASEALDLTGFYYSGKPSIIKRANKSNRTSTGRDTSLRDLRASSGDLRIGNSNEMLNSVVNRDRETDMNHQNTKDNFSSDAPHFQSGVLRTNCIDCLDRTNVAQYAYGLQALGRQLHAMGLTDMPKVDPYSSIAAALMDMYQSMGDALAQQYGGSAAHNTVFPERQGKWKATTQSREFLKSIKRYYSNAYTDGEKQDAINLFLGYFQPQEGKPALWELDSDYYLHVSGIGDDLIPERCSEPNLKPSGRGGTVFTPIPACREDFSRIKLTSFDKLIEKTCSTIKNVRLCCEPDQRPGGGSGNSGVAPDAAEIQLKSPNWLFGQRKYEEGSSASKVASRETDVEGSHANGFCDLNWLSSGNDMNEEDVFQRYLTMTSTNEANGWYGGSLLGDQDESSEIYKHYAELCQGPALELFQNDPEREQHYAGALSTSSYEIVNDATVAAEMEAALKEYDQVGSDLGIIPMSCKFFADDPSWLTRWLTGEEKVPRL
SIO_010081: LOC109798431
subclass of: SO_0000673
so part of: LOC109798431
location: join(113201..113341,113416..113620,113725..113890,113972..114197,115723..115799,119673..119860,119972..120069,121478..121611,121726..121857,123749..124130,124252..124373,124563..124673,124875..125087,126241..126420,127066..127177,128411..128659)
location: region:113201-128659:1
so has part: feature:113201-113341:1:exon
so has part: feature:113416-113620:1:exon
so has part: feature:113725-113890:1:exon
so has part: feature:113972-114197:1:exon
so has part: feature:115723-115799:1:exon
so has part: feature:119673-119860:1:exon
so has part: feature:119972-120069:1:exon
so has part: feature:121478-121611:1:exon
so has part: feature:121726-121857:1:exon
so has part: feature:123749-124130:1:exon
so has part: feature:124252-124373:1:exon
so has part: feature:124563-124673:1:exon
so has part: feature:124875-125087:1:exon
so has part: feature:126241-126420:1:exon
so has part: feature:127066-127177:1:exon
so has part: feature:128411-128659:1:exon

XP_020214295.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113201-113341:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:113416-113620:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:113725-113890:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:113972-114197:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:115723-115799:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:119673-119860:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:119972-120069:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:121478-121611:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:121726-121857:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:123749-124130:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:124252-124373:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:124563-124673:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:124875-125087:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:126241-126420:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:127066-127177:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:128411-128659:1:exon

LOC109798430
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798430
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(137117..147689)
location: region:137117-147689:-1
so has part: feature:137117-147689:-1:exon
subclass of: SO_0000010

109798430
type: Gene
SIO_000068: ncbigene

position:137117:-1
position: 137117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147689:-1
position: 147689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137117-147689:-1:exon

LOC109798430
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798430
product: ran-binding protein M homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_020358704.2
SIO_010081: LOC109798430
subclass of: SO_0000673
so part of: LOC109798430
location: complement(join(137117..137700,138387..138473,138705..138764,138963..139031,141223..141385,144481..144557,146555..146600,146734..146820,146906..147052,147121..147689))
location: region:137117-147689:-1
so has part: feature:147121-147689:-1:exon
so has part: feature:146906-147052:-1:exon
so has part: feature:146734-146820:-1:exon
so has part: feature:146555-146600:-1:exon
so has part: feature:144481-144557:-1:exon
so has part: feature:141223-141385:-1:exon
so has part: feature:138963-139031:-1:exon
so has part: feature:138705-138764:-1:exon
so has part: feature:138387-138473:-1:exon
so has part: feature:137117-137700:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147121-147689:-1:exon

position:147121:-1
position: 147121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:146906-147052:-1:exon

position:146906:-1
position: 146906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147052:-1
position: 147052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:146734-146820:-1:exon

position:146734:-1
position: 146734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146820:-1
position: 146820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:146555-146600:-1:exon

position:146555:-1
position: 146555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146600:-1
position: 146600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:144481-144557:-1:exon

position:144481:-1
position: 144481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144557:-1
position: 144557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:141223-141385:-1:exon

position:141223:-1
position: 141223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141385:-1
position: 141385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:138963-139031:-1:exon

position:138963:-1
position: 138963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139031:-1
position: 139031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:138705-138764:-1:exon

position:138705:-1
position: 138705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138764:-1
position: 138764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:138387-138473:-1:exon

position:138387:-1
position: 138387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138473:-1
position: 138473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:137117-137700:-1:exon

position:137700:-1
position: 137700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109798430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798430
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ran-binding protein M homolog
translation: MSESNGNSKRRNVEDQDLGLYFLEACRDREMKEGVMEEEEEAPRELNTINSSGGFVVVSTDKLSVKYTSVNLHGHDVGVIQANKPAPTKRLIYYFEIHVKDAGVKGQIAIGFTSETFKMRRQPGWEANSCGYHGDDGLLYRGHGKGEAFGPTFTSGDVVGAGINYAAHEFFFTKNGQVVGSVYKDMKGPLFPTIAVHSQNEEVHVNFGQKPFTFDLKEFEAQERMKQQLKIEEISVPPNVSYGIVRSYLLHYGYEDTLNSFDVASKSTVPPIYIAQESGSDDQEITYALNHRKTLRQLIRNGDIDVAFGKLREWYPQIVEDNTSATCFLLHCQKFIELVRVGALEEAVKYGRIELTCFFGLPVFEDLVQDCVALLAYEQPLESSVGYLLKDSQREVVADTVNAMILSTNPNTKESKHCLHSYLERLLRQLTACCLERRSLNGEQGEAFQLHRVLSSSKRG
SIO_010081: LOC109798430
subclass of: SO_0000673
so part of: LOC109798430
location: complement(join(137425..137700,138387..138473,138705..138764,138963..139031,141223..141385,144481..144557,146555..146600,146734..146820,146906..147052,147121..147491))
location: region:137425-147491:-1
so has part: feature:147121-147491:-1:exon
so has part: feature:146906-147052:-1:exon
so has part: feature:146734-146820:-1:exon
so has part: feature:146555-146600:-1:exon
so has part: feature:144481-144557:-1:exon
so has part: feature:141223-141385:-1:exon
so has part: feature:138963-139031:-1:exon
so has part: feature:138705-138764:-1:exon
so has part: feature:138387-138473:-1:exon
so has part: feature:137425-137700:-1:exon

XP_020214293.1
type: Protein
SIO_000068: ncbiprotein

position:137425:-1
position: 137425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147491:-1
position: 147491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147121-147491:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146906-147052:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:146734-146820:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:146555-146600:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:144481-144557:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141223-141385:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:138963-139031:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:138705-138764:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:138387-138473:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:137425-137700:-1:exon

LOC109798362
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798362
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(149051..171048)
location: region:149051-171048:-1
so has part: feature:149051-171048:-1:exon
subclass of: SO_0000010

109798362
type: Gene
SIO_000068: ncbigene

position:149051:-1
position: 149051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171048:-1
position: 171048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149051-171048:-1:exon

LOC109798362
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798362
product: DEAD-box ATP-dependent RNA helicase FANCM, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_020358595.2
SIO_010081: LOC109798362
subclass of: SO_0000673
so part of: LOC109798362
location: complement(join(149051..150009,150233..150373,150565..150616,150785..151240,151338..151733,152013..152076,152181..152516,152601..152728,157131..157296,157361..157410,157697..157767,157868..157928,166417..166547,167475..167668,169126..169239,169318..169439,169526..169580,169706..169797,169931..170045,170120..170202,170347..170490,170562..170796,170888..171048))
location: region:149051-171048:-1
so has part: feature:170888-171048:-1:exon
so has part: feature:170562-170796:-1:exon
so has part: feature:170347-170490:-1:exon
so has part: feature:170120-170202:-1:exon
so has part: feature:169931-170045:-1:exon
so has part: feature:169706-169797:-1:exon
so has part: feature:169526-169580:-1:exon
so has part: feature:169318-169439:-1:exon
so has part: feature:169126-169239:-1:exon
so has part: feature:167475-167668:-1:exon
so has part: feature:166417-166547:-1:exon
so has part: feature:157868-157928:-1:exon
so has part: feature:157697-157767:-1:exon
so has part: feature:157361-157410:-1:exon
so has part: feature:157131-157296:-1:exon
so has part: feature:152601-152728:-1:exon
so has part: feature:152181-152516:-1:exon
so has part: feature:152013-152076:-1:exon
so has part: feature:151338-151733:-1:exon
so has part: feature:150785-151240:-1:exon
so has part: feature:150565-150616:-1:exon
so has part: feature:150233-150373:-1:exon
so has part: feature:149051-150009:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:170888-171048:-1:exon

position:170888:-1
position: 170888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:170562-170796:-1:exon

position:170562:-1
position: 170562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170796:-1
position: 170796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:170347-170490:-1:exon

position:170347:-1
position: 170347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170490:-1
position: 170490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:170120-170202:-1:exon

position:170120:-1
position: 170120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170202:-1
position: 170202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:169931-170045:-1:exon

position:169931:-1
position: 169931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170045:-1
position: 170045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:169706-169797:-1:exon

position:169706:-1
position: 169706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169797:-1
position: 169797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:169526-169580:-1:exon

position:169526:-1
position: 169526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169580:-1
position: 169580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:169318-169439:-1:exon

position:169318:-1
position: 169318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169439:-1
position: 169439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:169126-169239:-1:exon

position:169126:-1
position: 169126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169239:-1
position: 169239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:167475-167668:-1:exon

position:167475:-1
position: 167475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167668:-1
position: 167668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:166417-166547:-1:exon

position:166417:-1
position: 166417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166547:-1
position: 166547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:157868-157928:-1:exon

position:157868:-1
position: 157868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157928:-1
position: 157928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:157697-157767:-1:exon

position:157697:-1
position: 157697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157767:-1
position: 157767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:157361-157410:-1:exon

position:157361:-1
position: 157361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157410:-1
position: 157410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:157131-157296:-1:exon

position:157131:-1
position: 157131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157296:-1
position: 157296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:152601-152728:-1:exon

position:152601:-1
position: 152601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152728:-1
position: 152728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:152181-152516:-1:exon

position:152181:-1
position: 152181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152516:-1
position: 152516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:152013-152076:-1:exon

position:152013:-1
position: 152013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152076:-1
position: 152076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:151338-151733:-1:exon

position:151338:-1
position: 151338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151733:-1
position: 151733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:150785-151240:-1:exon

position:150785:-1
position: 150785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151240:-1
position: 151240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:150565-150616:-1:exon

position:150565:-1
position: 150565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150616:-1
position: 150616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:150233-150373:-1:exon

position:150233:-1
position: 150233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150373:-1
position: 150373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:149051-150009:-1:exon

position:150009:-1
position: 150009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109798362
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798362
product: DEAD-box ATP-dependent RNA helicase FANCM, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_020358594.2
SIO_010081: LOC109798362
subclass of: SO_0000673
so part of: LOC109798362
location: complement(join(149051..150009,150233..150373,150565..150616,150785..151240,151338..151733,152013..152076,152181..152516,152601..152728,157131..157296,157361..157410,157697..157767,157868..157928,166417..166547,167475..167668,169126..169239,169318..169439,169526..169580,169706..169797,169931..170045,170120..170202,170347..170490,170562..170796,170876..171048))
location: region:149051-171048:-1
so has part: feature:170876-171048:-1:exon
so has part: feature:170562-170796:-1:exon
so has part: feature:170347-170490:-1:exon
so has part: feature:170120-170202:-1:exon
so has part: feature:169931-170045:-1:exon
so has part: feature:169706-169797:-1:exon
so has part: feature:169526-169580:-1:exon
so has part: feature:169318-169439:-1:exon
so has part: feature:169126-169239:-1:exon
so has part: feature:167475-167668:-1:exon
so has part: feature:166417-166547:-1:exon
so has part: feature:157868-157928:-1:exon
so has part: feature:157697-157767:-1:exon
so has part: feature:157361-157410:-1:exon
so has part: feature:157131-157296:-1:exon
so has part: feature:152601-152728:-1:exon
so has part: feature:152181-152516:-1:exon
so has part: feature:152013-152076:-1:exon
so has part: feature:151338-151733:-1:exon
so has part: feature:150785-151240:-1:exon
so has part: feature:150565-150616:-1:exon
so has part: feature:150233-150373:-1:exon
so has part: feature:149051-150009:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:170876-171048:-1:exon

position:170876:-1
position: 170876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:170562-170796:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:170347-170490:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:170120-170202:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:169931-170045:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:169706-169797:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:169526-169580:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:169318-169439:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:169126-169239:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:167475-167668:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:166417-166547:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:157868-157928:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:157697-157767:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:157361-157410:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:157131-157296:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:152601-152728:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:152181-152516:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:152013-152076:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:151338-151733:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:150785-151240:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:150565-150616:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:150233-150373:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:149051-150009:-1:exon

LOC109798362
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798362
product: DEAD-box ATP-dependent RNA helicase FANCM, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_020358596.2
SIO_010081: LOC109798362
subclass of: SO_0000673
so part of: LOC109798362
location: complement(join(149051..150009,150233..150373,150565..150616,150785..151240,151353..151733,152013..152076,152181..152516,152601..152728,157131..157296,157361..157410,157697..157767,157868..157928,166417..166547,167475..167668,169126..169239,169318..169439,169526..169580,169706..169797,169931..170045,170120..170202,170347..170490,170562..170796,170876..171047))
location: region:149051-171047:-1
so has part: feature:170876-171047:-1:exon
so has part: feature:170562-170796:-1:exon
so has part: feature:170347-170490:-1:exon
so has part: feature:170120-170202:-1:exon
so has part: feature:169931-170045:-1:exon
so has part: feature:169706-169797:-1:exon
so has part: feature:169526-169580:-1:exon
so has part: feature:169318-169439:-1:exon
so has part: feature:169126-169239:-1:exon
so has part: feature:167475-167668:-1:exon
so has part: feature:166417-166547:-1:exon
so has part: feature:157868-157928:-1:exon
so has part: feature:157697-157767:-1:exon
so has part: feature:157361-157410:-1:exon
so has part: feature:157131-157296:-1:exon
so has part: feature:152601-152728:-1:exon
so has part: feature:152181-152516:-1:exon
so has part: feature:152013-152076:-1:exon
so has part: feature:151353-151733:-1:exon
so has part: feature:150785-151240:-1:exon
so has part: feature:150565-150616:-1:exon
so has part: feature:150233-150373:-1:exon
so has part: feature:149051-150009:-1:exon

position:171047:-1
position: 171047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170876-171047:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:170562-170796:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:170347-170490:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:170120-170202:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:169931-170045:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:169706-169797:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:169526-169580:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:169318-169439:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:169126-169239:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:167475-167668:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:166417-166547:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:157868-157928:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:157697-157767:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:157361-157410:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:157131-157296:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:152601-152728:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:152181-152516:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:152013-152076:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:151353-151733:-1:exon

position:151353:-1
position: 151353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:150785-151240:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:150565-150616:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:150233-150373:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:149051-150009:-1:exon

LOC109798362
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798362
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DEAD-box ATP-dependent RNA helicase FANCM isoform X2
translation: MTSKNPHEIMDDEGFDWEAAAREIDVVCQLTSVTKEKGKGKVYEKRKQSTLDEFVSIGKKETPIPQFEDDDGGPTFVHQIDAEAAKTWTYPVNVPLRDYQFGITQSALFSNTLVALPTGLGKTLIAAVVMYNYFRWFPQGKIVFAAPSRPLVMQQIEACHNIVGIPQEWTVDMTGQISPPKRAQFWKTKRVFFVTPQVLEKDIHSGTCLVKYLVCLVIDEAHRAMGNYAYCEAVRELMAVPVQLRILALTATPGSKQQTIQAVIDNLHISRLEYRSETDHDVITYVHNRKIELIQVAMGPDAVEINNKFMEVIRPIVARLTNVGVIQNRDYRTLSPCQLLEIREKFRQRPKQDLSHVNYEDVEGYFGVLITLYYIHKLLSSHGIRPAYEMLERKLKQGYFAKFMSKNEVILKARQLMQQSLSHGASSPKLTKMLEVLLGHFKTNDPQNSRVIIFSNYRESVRDIMDALGDIGELVRATEFIGQSSGKAMKGQSQKVQQAVLKKFRSGTYNVIVATSIGEEGLDIMEVDLVISFDANISPLRMIQRMGRTGRKHDGRVVVLACEGAELKGYLRKQAKSKTISKHMRNGGVNSFTFHPSPRMIPHVLKPEVQYVELSIEKFIPRQQNLKDDEFHTSPSKDKLTVAEIDFLETYFVPTGENNCRMSLIAFPHFQTFPSRVHKVKHSPGTLMLIDIMQRLQGLVSFPEDDKTSSLQEALCLGPSKPVATTKLDEDKKDNESCSRHTMRSNVISVNCLELDCCHSGIQSKDFIDITPQDGTFSDLSKDQEETCEGDETIPETPIAKRSVSNKGDNAGQMVNLVEIEISSLVADACINGMKDEELSPRLTNFIRSGVVPESPVDERGRCLQGKSRFNSVIHECMLPVHLHQEQDVSSLSPWETEKVLIDRGTNKNACTSPVVNETQTSLLELKNRAIRRGLVFLSQTEEGHVHNTDPSFSDEALPDCGEMSESIKPARKFKRLRKAEDTESNINHKNNKIFASTANFLKSSSASNPARYKHGQGERKSTHNVRDFIEEEAEVSLDSFVSNDEDDEDGNSFDSFIDDRTNPTAASQLEASRLDMMAIYRRSLLSQTPSNGGLGFSATFTPDSVTMAASISESEDSSGKTVNHLHTEPTKQSVNPTSESVSIEQITSEAVPSTCSPTGTGTEIRSRKRRLSFYHSGHFPNMNLDREFALQSKKETVDADVIVTTDVLYDDQFYNDLDLDELEAQATSLLKRKLDLSIQKQDTVPQSHTPNLDIFRSPSFDLGIERHDISTDAARHLHSGN
SIO_010081: LOC109798362
subclass of: SO_0000673
so part of: LOC109798362
location: complement(join(149406..150009,150233..150373,150565..150616,150785..151240,151338..151733,152013..152076,152181..152516,152601..152728,157131..157296,157361..157410,157697..157767,157868..157928,166417..166547,167475..167668,169126..169239,169318..169439,169526..169580,169706..169797,169931..170045,170120..170202,170347..170490,170562..170796,170888..170926))
location: region:149406-170926:-1
so has part: feature:170888-170926:-1:exon
so has part: feature:170562-170796:-1:exon
so has part: feature:170347-170490:-1:exon
so has part: feature:170120-170202:-1:exon
so has part: feature:169931-170045:-1:exon
so has part: feature:169706-169797:-1:exon
so has part: feature:169526-169580:-1:exon
so has part: feature:169318-169439:-1:exon
so has part: feature:169126-169239:-1:exon
so has part: feature:167475-167668:-1:exon
so has part: feature:166417-166547:-1:exon
so has part: feature:157868-157928:-1:exon
so has part: feature:157697-157767:-1:exon
so has part: feature:157361-157410:-1:exon
so has part: feature:157131-157296:-1:exon
so has part: feature:152601-152728:-1:exon
so has part: feature:152181-152516:-1:exon
so has part: feature:152013-152076:-1:exon
so has part: feature:151338-151733:-1:exon
so has part: feature:150785-151240:-1:exon
so has part: feature:150565-150616:-1:exon
so has part: feature:150233-150373:-1:exon
so has part: feature:149406-150009:-1:exon

XP_020214184.1
type: Protein
SIO_000068: ncbiprotein

position:149406:-1
position: 149406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170926:-1
position: 170926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170888-170926:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:170562-170796:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:170347-170490:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:170120-170202:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:169931-170045:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:169706-169797:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:169526-169580:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:169318-169439:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:169126-169239:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:167475-167668:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:166417-166547:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:157868-157928:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:157697-157767:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:157361-157410:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:157131-157296:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:152601-152728:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:152181-152516:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:152013-152076:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:151338-151733:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:150785-151240:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:150565-150616:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:150233-150373:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:149406-150009:-1:exon

LOC109798362
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798362
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DEAD-box ATP-dependent RNA helicase FANCM isoform X3
translation: MTSKNPHEIMDDEVRKWGFDWEAAAREIDVVCQLTSVTKEKGKGKVYEKRKQSTLDEFVSIGKKETPIPQFEDDDGGPTFVHQIDAEAAKTWTYPVNVPLRDYQFGITQSALFSNTLVALPTGLGKTLIAAVVMYNYFRWFPQGKIVFAAPSRPLVMQQIEACHNIVGIPQEWTVDMTGQISPPKRAQFWKTKRVFFVTPQVLEKDIHSGTCLVKYLVCLVIDEAHRAMGNYAYCEAVRELMAVPVQLRILALTATPGSKQQTIQAVIDNLHISRLEYRSETDHDVITYVHNRKIELIQVAMGPDAVEINNKFMEVIRPIVARLTNVGVIQNRDYRTLSPCQLLEIREKFRQRPKQDLSHVNYEDVEGYFGVLITLYYIHKLLSSHGIRPAYEMLERKLKQGYFAKFMSKNEVILKARQLMQQSLSHGASSPKLTKMLEVLLGHFKTNDPQNSRVIIFSNYRESVRDIMDALGDIGELVRATEFIGQSSGKAMKGQSQKVQQAVLKKFRSGTYNVIVATSIGEEGLDIMEVDLVISFDANISPLRMIQRMGRTGRKHDGRVVVLACEGAELKGYLRKQAKSKTISKHMRNGGVNSFTFHPSPRMIPHVLKPEVQYVELSIEKFIPRQQNLKDDEFHTSPSKDKLTVAEIDFLETYFVPTGENNCRMSLIAFPHFQTFPSRVHKVKHSPGTLMLIDIMQRLQGLVSFPEDDKTSSLQEALCLGPSKPVATTKLDEDKKDNESCSRHTMRSNVISVNCLELDCCHSGIQSKDFIDITPQDGTFSDLSKDQEETCEGDETIPETPIAKRSVSNKGDNAGQMVNLVEIEISSLVADACINGMKDEELSPRLTNFIRSGVVPESPVDERGKSRFNSVIHECMLPVHLHQEQDVSSLSPWETEKVLIDRGTNKNACTSPVVNETQTSLLELKNRAIRRGLVFLSQTEEGHVHNTDPSFSDEALPDCGEMSESIKPARKFKRLRKAEDTESNINHKNNKIFASTANFLKSSSASNPARYKHGQGERKSTHNVRDFIEEEAEVSLDSFVSNDEDDEDGNSFDSFIDDRTNPTAASQLEASRLDMMAIYRRSLLSQTPSNGGLGFSATFTPDSVTMAASISESEDSSGKTVNHLHTEPTKQSVNPTSESVSIEQITSEAVPSTCSPTGTGTEIRSRKRRLSFYHSGHFPNMNLDREFALQSKKETVDADVIVTTDVLYDDQFYNDLDLDELEAQATSLLKRKLDLSIQKQDTVPQSHTPNLDIFRSPSFDLGIERHDISTDAARHLHSGN
SIO_010081: LOC109798362
subclass of: SO_0000673
so part of: LOC109798362
location: complement(join(149406..150009,150233..150373,150565..150616,150785..151240,151353..151733,152013..152076,152181..152516,152601..152728,157131..157296,157361..157410,157697..157767,157868..157928,166417..166547,167475..167668,169126..169239,169318..169439,169526..169580,169706..169797,169931..170045,170120..170202,170347..170490,170562..170796,170876..170926))
location: region:149406-170926:-1
so has part: feature:170876-170926:-1:exon
so has part: feature:170562-170796:-1:exon
so has part: feature:170347-170490:-1:exon
so has part: feature:170120-170202:-1:exon
so has part: feature:169931-170045:-1:exon
so has part: feature:169706-169797:-1:exon
so has part: feature:169526-169580:-1:exon
so has part: feature:169318-169439:-1:exon
so has part: feature:169126-169239:-1:exon
so has part: feature:167475-167668:-1:exon
so has part: feature:166417-166547:-1:exon
so has part: feature:157868-157928:-1:exon
so has part: feature:157697-157767:-1:exon
so has part: feature:157361-157410:-1:exon
so has part: feature:157131-157296:-1:exon
so has part: feature:152601-152728:-1:exon
so has part: feature:152181-152516:-1:exon
so has part: feature:152013-152076:-1:exon
so has part: feature:151353-151733:-1:exon
so has part: feature:150785-151240:-1:exon
so has part: feature:150565-150616:-1:exon
so has part: feature:150233-150373:-1:exon
so has part: feature:149406-150009:-1:exon

XP_020214185.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:170876-170926:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:170562-170796:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:170347-170490:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:170120-170202:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:169931-170045:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:169706-169797:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:169526-169580:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:169318-169439:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:169126-169239:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:167475-167668:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:166417-166547:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:157868-157928:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:157697-157767:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:157361-157410:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:157131-157296:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:152601-152728:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:152181-152516:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:152013-152076:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:151353-151733:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:150785-151240:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:150565-150616:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:150233-150373:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:149406-150009:-1:exon

LOC109798362
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798362
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DEAD-box ATP-dependent RNA helicase FANCM isoform X1
translation: MTSKNPHEIMDDEVRKWGFDWEAAAREIDVVCQLTSVTKEKGKGKVYEKRKQSTLDEFVSIGKKETPIPQFEDDDGGPTFVHQIDAEAAKTWTYPVNVPLRDYQFGITQSALFSNTLVALPTGLGKTLIAAVVMYNYFRWFPQGKIVFAAPSRPLVMQQIEACHNIVGIPQEWTVDMTGQISPPKRAQFWKTKRVFFVTPQVLEKDIHSGTCLVKYLVCLVIDEAHRAMGNYAYCEAVRELMAVPVQLRILALTATPGSKQQTIQAVIDNLHISRLEYRSETDHDVITYVHNRKIELIQVAMGPDAVEINNKFMEVIRPIVARLTNVGVIQNRDYRTLSPCQLLEIREKFRQRPKQDLSHVNYEDVEGYFGVLITLYYIHKLLSSHGIRPAYEMLERKLKQGYFAKFMSKNEVILKARQLMQQSLSHGASSPKLTKMLEVLLGHFKTNDPQNSRVIIFSNYRESVRDIMDALGDIGELVRATEFIGQSSGKAMKGQSQKVQQAVLKKFRSGTYNVIVATSIGEEGLDIMEVDLVISFDANISPLRMIQRMGRTGRKHDGRVVVLACEGAELKGYLRKQAKSKTISKHMRNGGVNSFTFHPSPRMIPHVLKPEVQYVELSIEKFIPRQQNLKDDEFHTSPSKDKLTVAEIDFLETYFVPTGENNCRMSLIAFPHFQTFPSRVHKVKHSPGTLMLIDIMQRLQGLVSFPEDDKTSSLQEALCLGPSKPVATTKLDEDKKDNESCSRHTMRSNVISVNCLELDCCHSGIQSKDFIDITPQDGTFSDLSKDQEETCEGDETIPETPIAKRSVSNKGDNAGQMVNLVEIEISSLVADACINGMKDEELSPRLTNFIRSGVVPESPVDERGRCLQGKSRFNSVIHECMLPVHLHQEQDVSSLSPWETEKVLIDRGTNKNACTSPVVNETQTSLLELKNRAIRRGLVFLSQTEEGHVHNTDPSFSDEALPDCGEMSESIKPARKFKRLRKAEDTESNINHKNNKIFASTANFLKSSSASNPARYKHGQGERKSTHNVRDFIEEEAEVSLDSFVSNDEDDEDGNSFDSFIDDRTNPTAASQLEASRLDMMAIYRRSLLSQTPSNGGLGFSATFTPDSVTMAASISESEDSSGKTVNHLHTEPTKQSVNPTSESVSIEQITSEAVPSTCSPTGTGTEIRSRKRRLSFYHSGHFPNMNLDREFALQSKKETVDADVIVTTDVLYDDQFYNDLDLDELEAQATSLLKRKLDLSIQKQDTVPQSHTPNLDIFRSPSFDLGIERHDISTDAARHLHSGN
SIO_010081: LOC109798362
subclass of: SO_0000673
so part of: LOC109798362
location: complement(join(149406..150009,150233..150373,150565..150616,150785..151240,151338..151733,152013..152076,152181..152516,152601..152728,157131..157296,157361..157410,157697..157767,157868..157928,166417..166547,167475..167668,169126..169239,169318..169439,169526..169580,169706..169797,169931..170045,170120..170202,170347..170490,170562..170796,170876..170926))
location: region:149406-170926:-1
so has part: feature:170876-170926:-1:exon
so has part: feature:170562-170796:-1:exon
so has part: feature:170347-170490:-1:exon
so has part: feature:170120-170202:-1:exon
so has part: feature:169931-170045:-1:exon
so has part: feature:169706-169797:-1:exon
so has part: feature:169526-169580:-1:exon
so has part: feature:169318-169439:-1:exon
so has part: feature:169126-169239:-1:exon
so has part: feature:167475-167668:-1:exon
so has part: feature:166417-166547:-1:exon
so has part: feature:157868-157928:-1:exon
so has part: feature:157697-157767:-1:exon
so has part: feature:157361-157410:-1:exon
so has part: feature:157131-157296:-1:exon
so has part: feature:152601-152728:-1:exon
so has part: feature:152181-152516:-1:exon
so has part: feature:152013-152076:-1:exon
so has part: feature:151338-151733:-1:exon
so has part: feature:150785-151240:-1:exon
so has part: feature:150565-150616:-1:exon
so has part: feature:150233-150373:-1:exon
so has part: feature:149406-150009:-1:exon

XP_020214183.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:170876-170926:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:170562-170796:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:170347-170490:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:170120-170202:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:169931-170045:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:169706-169797:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:169526-169580:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:169318-169439:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:169126-169239:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:167475-167668:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:166417-166547:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:157868-157928:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:157697-157767:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:157361-157410:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:157131-157296:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:152601-152728:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:152181-152516:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:152013-152076:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:151338-151733:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:150785-151240:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:150565-150616:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:150233-150373:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:149406-150009:-1:exon

LOC109798722
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798722
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 178627..183530
location: region:178627-183530:1
so has part: feature:178627-183530:1:exon
subclass of: SO_0000010

109798722
type: Gene
SIO_000068: ncbigene

position:178627:1
position: 178627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183530:1
position: 183530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178627-183530:1:exon

LOC109798722
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798722
product: immune-associated nucleotide-binding protein 9, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_020359094.1
SIO_010081: LOC109798722
subclass of: SO_0000673
so part of: LOC109798722
location: join(178627..178843,179420..179666,179769..180046,181182..181346,181427..181567,183066..183530)
location: region:178627-183530:1
so has part: feature:178627-178843:1:exon
so has part: feature:179420-179666:1:exon
so has part: feature:179769-180046:1:exon
so has part: feature:181182-181346:1:exon
so has part: feature:181427-181567:1:exon
so has part: feature:183066-183530:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:178627-178843:1:exon

position:178843:1
position: 178843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:179420-179666:1:exon

position:179420:1
position: 179420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179666:1
position: 179666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:179769-180046:1:exon

position:179769:1
position: 179769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180046:1
position: 180046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:181182-181346:1:exon

position:181182:1
position: 181182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181346:1
position: 181346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:181427-181567:1:exon

position:181427:1
position: 181427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181567:1
position: 181567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:183066-183530:1:exon

position:183066:1
position: 183066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109798722
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798722
product: immune-associated nucleotide-binding protein 9, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_020359095.2
SIO_010081: LOC109798722
subclass of: SO_0000673
so part of: LOC109798722
location: join(178657..178753,179420..179666,179769..180046,181182..181346,181427..181567,183066..183416)
location: region:178657-183416:1
so has part: feature:178657-178753:1:exon
so has part: feature:179420-179666:1:exon
so has part: feature:179769-180046:1:exon
so has part: feature:181182-181346:1:exon
so has part: feature:181427-181567:1:exon
so has part: feature:183066-183416:1:exon

position:178657:1
position: 178657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183416:1
position: 183416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178657-178753:1:exon

position:178753:1
position: 178753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:179420-179666:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:179769-180046:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:181182-181346:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:181427-181567:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:183066-183416:1:exon

LOC109798722
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798722
product: immune-associated nucleotide-binding protein 9, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_029271244.1
SIO_010081: LOC109798722
subclass of: SO_0000673
so part of: LOC109798722
location: join(178658..178843,179095..179174,179420..179666,179769..180046,181182..181346,181427..181567,183066..183416)
location: region:178658-183416:1
so has part: feature:178658-178843:1:exon
so has part: feature:179095-179174:1:exon
so has part: feature:179420-179666:1:exon
so has part: feature:179769-180046:1:exon
so has part: feature:181182-181346:1:exon
so has part: feature:181427-181567:1:exon
so has part: feature:183066-183416:1:exon

position:178658:1
position: 178658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178658-178843:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:179095-179174:1:exon

position:179095:1
position: 179095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179174:1
position: 179174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:179420-179666:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:179769-180046:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:181182-181346:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:181427-181567:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:183066-183416:1:exon

LOC109798722
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798722
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: immune-associated nucleotide-binding protein 9
translation: MMGGSSIDDDWDLTSSSNEVRTVVLVGRTGNGKSATGNTILGRKVFKSKASSHAVTTSCEMQTTELYEGQIINVIDTPGLFDFSAGSEFVGKEIVKCIDLAKDGIHAVLVVLSVRTRFTEEEESALRSLQKLFGSKIVDYMIVVFTGGDELEDNDETLEDYLGRGCPKPLKEILFLCENRYVLFDNKTKDERKRVGQVQELLSFVNMVLSRNVGRPYTDELFTELKKGAMELHNRQREVDSLKLKGHSEGELMEFKKQMQQTYDDQLKRITEMVESKLREATTRLEQQLAEEQAARLKAEENAMLAQMRSDDEIRKLREHLEKAHEELRKRGEVRCAIL
SIO_010081: LOC109798722
subclass of: SO_0000673
so part of: LOC109798722
location: join(179432..179666,179769..180046,181182..181346,181427..181567,183066..183266)
location: region:179432-183266:1
so has part: feature:179432-179666:1:exon
so has part: feature:179769-180046:1:exon
so has part: feature:181182-181346:1:exon
so has part: feature:181427-181567:1:exon
so has part: feature:183066-183266:1:exon

XP_020214683.1
type: Protein
SIO_000068: ncbiprotein

position:179432:1
position: 179432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183266:1
position: 183266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179432-179666:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:179769-180046:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:181182-181346:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:181427-181567:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:183066-183266:1:exon

LOC109798722
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798722
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: immune-associated nucleotide-binding protein 9
translation: MMGGSSIDDDWDLTSSSNEVRTVVLVGRTGNGKSATGNTILGRKVFKSKASSHAVTTSCEMQTTELYEGQIINVIDTPGLFDFSAGSEFVGKEIVKCIDLAKDGIHAVLVVLSVRTRFTEEEESALRSLQKLFGSKIVDYMIVVFTGGDELEDNDETLEDYLGRGCPKPLKEILFLCENRYVLFDNKTKDERKRVGQVQELLSFVNMVLSRNVGRPYTDELFTELKKGAMELHNRQREVDSLKLKGHSEGELMEFKKQMQQTYDDQLKRITEMVESKLREATTRLEQQLAEEQAARLKAEENAMLAQMRSDDEIRKLREHLEKAHEELRKRGEVRCAIL
SIO_010081: LOC109798722
subclass of: SO_0000673
so part of: LOC109798722
location: join(179432..179666,179769..180046,181182..181346,181427..181567,183066..183266)
location: region:179432-183266:1
so has part: feature:179432-179666:1:exon
so has part: feature:179769-180046:1:exon
so has part: feature:181182-181346:1:exon
so has part: feature:181427-181567:1:exon
so has part: feature:183066-183266:1:exon

XP_020214684.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:179432-179666:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:179769-180046:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:181182-181346:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:181427-181567:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:183066-183266:1:exon

LOC109798722
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798722
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: immune-associated nucleotide-binding protein 9
translation: MMGGSSIDDDWDLTSSSNEVRTVVLVGRTGNGKSATGNTILGRKVFKSKASSHAVTTSCEMQTTELYEGQIINVIDTPGLFDFSAGSEFVGKEIVKCIDLAKDGIHAVLVVLSVRTRFTEEEESALRSLQKLFGSKIVDYMIVVFTGGDELEDNDETLEDYLGRGCPKPLKEILFLCENRYVLFDNKTKDERKRVGQVQELLSFVNMVLSRNVGRPYTDELFTELKKGAMELHNRQREVDSLKLKGHSEGELMEFKKQMQQTYDDQLKRITEMVESKLREATTRLEQQLAEEQAARLKAEENAMLAQMRSDDEIRKLREHLEKAHEELRKRGEVRCAIL
SIO_010081: LOC109798722
subclass of: SO_0000673
so part of: LOC109798722
location: join(179432..179666,179769..180046,181182..181346,181427..181567,183066..183266)
location: region:179432-183266:1
so has part: feature:179432-179666:1:exon
so has part: feature:179769-180046:1:exon
so has part: feature:181182-181346:1:exon
so has part: feature:181427-181567:1:exon
so has part: feature:183066-183266:1:exon

XP_029127077.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:179432-179666:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:179769-180046:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:181182-181346:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:181427-181567:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:183066-183266:1:exon

LOC109798907
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798907
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(190159..191836)
location: region:190159-191836:-1
so has part: feature:190159-191836:-1:exon
subclass of: SO_0000011

109798907
type: Gene
SIO_000068: ncbigene

position:190159:-1
position: 190159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191836:-1
position: 191836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190159-191836:-1:exon

LOC109798907
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3821
nc RNA class: lncRNA
gene: LOC109798907
product: uncharacterized LOC109798907
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XR_002239820.2
SIO_010081: LOC109798907
subclass of: SO_0000673
so part of: LOC109798907
location: complement(join(190159..190845,191513..191836))
location: region:190159-191836:-1
so has part: feature:191513-191836:-1:exon
so has part: feature:190159-190845:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:191513-191836:-1:exon

position:191513:-1
position: 191513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:190159-190845:-1:exon

position:190845:-1
position: 190845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109798375
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798375
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(192442..205276)
location: region:192442-205276:-1
so has part: feature:192442-205276:-1:exon
subclass of: SO_0000010

109798375
type: Gene
SIO_000068: ncbigene

position:192442:-1
position: 192442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:205276:-1
position: 205276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192442-205276:-1:exon

LOC109798375
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798375
product: uncharacterized LOC109798375, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_020358610.1
SIO_010081: LOC109798375
subclass of: SO_0000673
so part of: LOC109798375
location: complement(join(192442..193003,193800..193851,195525..195641,197646..197902,201886..201955,203623..203768,205069..205276))
location: region:192442-205276:-1
so has part: feature:205069-205276:-1:exon
so has part: feature:203623-203768:-1:exon
so has part: feature:201886-201955:-1:exon
so has part: feature:197646-197902:-1:exon
so has part: feature:195525-195641:-1:exon
so has part: feature:193800-193851:-1:exon
so has part: feature:192442-193003:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:205069-205276:-1:exon

position:205069:-1
position: 205069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:203623-203768:-1:exon

position:203623:-1
position: 203623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:203768:-1
position: 203768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:201886-201955:-1:exon

position:201886:-1
position: 201886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201955:-1
position: 201955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:197646-197902:-1:exon

position:197646:-1
position: 197646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197902:-1
position: 197902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:195525-195641:-1:exon

position:195525:-1
position: 195525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195641:-1
position: 195641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:193800-193851:-1:exon

position:193800:-1
position: 193800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193851:-1
position: 193851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:192442-193003:-1:exon

position:193003:-1
position: 193003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109798375
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798375
product: uncharacterized LOC109798375, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_029271245.1
SIO_010081: LOC109798375
subclass of: SO_0000673
so part of: LOC109798375
location: complement(join(192442..193003,193800..193851,195525..195641,197646..197902,201886..201955,205069..205257))
location: region:192442-205257:-1
so has part: feature:205069-205257:-1:exon
so has part: feature:201886-201955:-1:exon
so has part: feature:197646-197902:-1:exon
so has part: feature:195525-195641:-1:exon
so has part: feature:193800-193851:-1:exon
so has part: feature:192442-193003:-1:exon

position:205257:-1
position: 205257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205069-205257:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:201886-201955:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:197646-197902:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:195525-195641:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:193800-193851:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:192442-193003:-1:exon

LOC109798375
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798375
product: uncharacterized LOC109798375, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_029271246.1
SIO_010081: LOC109798375
subclass of: SO_0000673
so part of: LOC109798375
location: complement(join(192442..193003,193800..193851,195525..195641,197646..197902,203623..203727,205069..205257))
location: region:192442-205257:-1
so has part: feature:205069-205257:-1:exon
so has part: feature:203623-203727:-1:exon
so has part: feature:197646-197902:-1:exon
so has part: feature:195525-195641:-1:exon
so has part: feature:193800-193851:-1:exon
so has part: feature:192442-193003:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:205069-205257:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:203623-203727:-1:exon

position:203727:-1
position: 203727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:197646-197902:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:195525-195641:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:193800-193851:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:192442-193003:-1:exon

LOC109798375
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798375
product: uncharacterized LOC109798375, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_020358613.2
SIO_010081: LOC109798375
subclass of: SO_0000673
so part of: LOC109798375
location: complement(join(192442..193003,193800..193851,195525..195641,197646..197902,201886..201955,203623..203759,205077..205255))
location: region:192442-205255:-1
so has part: feature:205077-205255:-1:exon
so has part: feature:203623-203759:-1:exon
so has part: feature:201886-201955:-1:exon
so has part: feature:197646-197902:-1:exon
so has part: feature:195525-195641:-1:exon
so has part: feature:193800-193851:-1:exon
so has part: feature:192442-193003:-1:exon

position:205255:-1
position: 205255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205077-205255:-1:exon

position:205077:-1
position: 205077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:203623-203759:-1:exon

position:203759:-1
position: 203759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:201886-201955:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:197646-197902:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:195525-195641:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:193800-193851:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:192442-193003:-1:exon

LOC109798375
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798375
product: uncharacterized LOC109798375, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_020358614.2
SIO_010081: LOC109798375
subclass of: SO_0000673
so part of: LOC109798375
location: complement(join(192442..193003,193800..193851,195525..195641,197646..197902,201886..201955,203623..203727,205069..205255))
location: region:192442-205255:-1
so has part: feature:205069-205255:-1:exon
so has part: feature:203623-203727:-1:exon
so has part: feature:201886-201955:-1:exon
so has part: feature:197646-197902:-1:exon
so has part: feature:195525-195641:-1:exon
so has part: feature:193800-193851:-1:exon
so has part: feature:192442-193003:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:205069-205255:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:203623-203727:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:201886-201955:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:197646-197902:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:195525-195641:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:193800-193851:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:192442-193003:-1:exon

LOC109798375
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798375
product: uncharacterized LOC109798375, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_020358611.2
SIO_010081: LOC109798375
subclass of: SO_0000673
so part of: LOC109798375
location: complement(join(192442..193003,193800..193851,195525..195641,197646..197902,201886..201955,203623..203759,205069..205255))
location: region:192442-205255:-1
so has part: feature:205069-205255:-1:exon
so has part: feature:203623-203759:-1:exon
so has part: feature:201886-201955:-1:exon
so has part: feature:197646-197902:-1:exon
so has part: feature:195525-195641:-1:exon
so has part: feature:193800-193851:-1:exon
so has part: feature:192442-193003:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:205069-205255:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:203623-203759:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:201886-201955:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:197646-197902:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:195525-195641:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:193800-193851:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:192442-193003:-1:exon

LOC109798375
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798375
product: uncharacterized LOC109798375, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_020358612.2
SIO_010081: LOC109798375
subclass of: SO_0000673
so part of: LOC109798375
location: complement(join(192442..193003,193800..193851,195525..195641,197646..197902,201886..201955,203623..203768,205077..205091))
location: region:192442-205091:-1
so has part: feature:205077-205091:-1:exon
so has part: feature:203623-203768:-1:exon
so has part: feature:201886-201955:-1:exon
so has part: feature:197646-197902:-1:exon
so has part: feature:195525-195641:-1:exon
so has part: feature:193800-193851:-1:exon
so has part: feature:192442-193003:-1:exon

position:205091:-1
position: 205091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205077-205091:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:203623-203768:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:201886-201955:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:197646-197902:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:195525-195641:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:193800-193851:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:192442-193003:-1:exon

LOC109798375
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798375
product: uncharacterized LOC109798375, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_020358616.2
SIO_010081: LOC109798375
subclass of: SO_0000673
so part of: LOC109798375
location: complement(join(192442..193003,193800..193851,195525..195641,197646..197902,203623..203762))
location: region:192442-203762:-1
so has part: feature:203623-203762:-1:exon
so has part: feature:197646-197902:-1:exon
so has part: feature:195525-195641:-1:exon
so has part: feature:193800-193851:-1:exon
so has part: feature:192442-193003:-1:exon

position:203762:-1
position: 203762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203623-203762:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197646-197902:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:195525-195641:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:193800-193851:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:192442-193003:-1:exon

LOC109798375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798375
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109798375 isoform X2
translation: MSYAIPLGNLIRDIRTKNAAVSHQLEYFDYPDQKLSWIKLYQKPQTTICKSKGFNRELMLRPSFPTFHYESEKLDVNTTSEVIVIVNNLWKVGDLVDWYTDGCYWSGSVTKILGNDKVQIDLLPPPLGEGSSYEALSKDLRPSLDWCPGKGWTVPMPMGDGCMQPCARIVNPANSDGTVKVDQPTVRTYFSPSQNLKGLLDCPDRNGMVFHESDSKVERACFSDNVSSAHIKDASIENLEKANINGGYNEYPAKKRSKKSLCLNSMSSNTIEAAIMDLEELVNRIKWLKGVLNLRMPLSDTKQPSWEFSQHHAPCN
SIO_010081: LOC109798375
subclass of: SO_0000673
so part of: LOC109798375
location: complement(join(192579..193003,193800..193851,195525..195641,197646..197902,201886..201955,205069..205098))
location: region:192579-205098:-1
so has part: feature:205069-205098:-1:exon
so has part: feature:201886-201955:-1:exon
so has part: feature:197646-197902:-1:exon
so has part: feature:195525-195641:-1:exon
so has part: feature:193800-193851:-1:exon
so has part: feature:192579-193003:-1:exon

XP_029127078.1
type: Protein
SIO_000068: ncbiprotein

position:192579:-1
position: 192579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:205098:-1
position: 205098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205069-205098:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:201886-201955:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:197646-197902:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:195525-195641:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:193800-193851:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:192579-193003:-1:exon

LOC109798375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798375
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109798375 isoform X1
translation: MPDLPFQVGDLAESRSFQVGYRGAWFRCKIRDIRTKNAAVSHQLEYFDYPDQKLSWIKLYQKPQTTICKSKGFNRELMLRPSFPTFHYESEKLDVNTTSEVIVIVNNLWKVGDLVDWYTDGCYWSGSVTKILGNDKVQIDLLPPPLGEGSSYEALSKDLRPSLDWCPGKGWTVPMPMGDGCMQPCARIVNPANSDGTVKVDQPTVRTYFSPSQNLKGLLDCPDRNGMVFHESDSKVERACFSDNVSSAHIKDASIENLEKANINGGYNEYPAKKRSKKSLCLNSMSSNTIEAAIMDLEELVNRIKWLKGVLNLRMPLSDTKQPSWEFSQHHAPCN
SIO_010081: LOC109798375
subclass of: SO_0000673
so part of: LOC109798375
location: complement(join(192579..193003,193800..193851,195525..195641,197646..197902,201886..201955,203623..203709))
location: region:192579-203709:-1
so has part: feature:203623-203709:-1:exon
so has part: feature:201886-201955:-1:exon
so has part: feature:197646-197902:-1:exon
so has part: feature:195525-195641:-1:exon
so has part: feature:193800-193851:-1:exon
so has part: feature:192579-193003:-1:exon

XP_020214199.1
type: Protein
SIO_000068: ncbiprotein

position:203709:-1
position: 203709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203623-203709:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:201886-201955:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:197646-197902:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:195525-195641:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:193800-193851:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:192579-193003:-1:exon

LOC109798375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798375
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109798375 isoform X1
translation: MPDLPFQVGDLAESRSFQVGYRGAWFRCKIRDIRTKNAAVSHQLEYFDYPDQKLSWIKLYQKPQTTICKSKGFNRELMLRPSFPTFHYESEKLDVNTTSEVIVIVNNLWKVGDLVDWYTDGCYWSGSVTKILGNDKVQIDLLPPPLGEGSSYEALSKDLRPSLDWCPGKGWTVPMPMGDGCMQPCARIVNPANSDGTVKVDQPTVRTYFSPSQNLKGLLDCPDRNGMVFHESDSKVERACFSDNVSSAHIKDASIENLEKANINGGYNEYPAKKRSKKSLCLNSMSSNTIEAAIMDLEELVNRIKWLKGVLNLRMPLSDTKQPSWEFSQHHAPCN
SIO_010081: LOC109798375
subclass of: SO_0000673
so part of: LOC109798375
location: complement(join(192579..193003,193800..193851,195525..195641,197646..197902,201886..201955,203623..203709))
location: region:192579-203709:-1
so has part: feature:203623-203709:-1:exon
so has part: feature:201886-201955:-1:exon
so has part: feature:197646-197902:-1:exon
so has part: feature:195525-195641:-1:exon
so has part: feature:193800-193851:-1:exon
so has part: feature:192579-193003:-1:exon

XP_020214200.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:203623-203709:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:201886-201955:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:197646-197902:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:195525-195641:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:193800-193851:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:192579-193003:-1:exon

LOC109798375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798375
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109798375 isoform X1
translation: MPDLPFQVGDLAESRSFQVGYRGAWFRCKIRDIRTKNAAVSHQLEYFDYPDQKLSWIKLYQKPQTTICKSKGFNRELMLRPSFPTFHYESEKLDVNTTSEVIVIVNNLWKVGDLVDWYTDGCYWSGSVTKILGNDKVQIDLLPPPLGEGSSYEALSKDLRPSLDWCPGKGWTVPMPMGDGCMQPCARIVNPANSDGTVKVDQPTVRTYFSPSQNLKGLLDCPDRNGMVFHESDSKVERACFSDNVSSAHIKDASIENLEKANINGGYNEYPAKKRSKKSLCLNSMSSNTIEAAIMDLEELVNRIKWLKGVLNLRMPLSDTKQPSWEFSQHHAPCN
SIO_010081: LOC109798375
subclass of: SO_0000673
so part of: LOC109798375
location: complement(join(192579..193003,193800..193851,195525..195641,197646..197902,201886..201955,203623..203709))
location: region:192579-203709:-1
so has part: feature:203623-203709:-1:exon
so has part: feature:201886-201955:-1:exon
so has part: feature:197646-197902:-1:exon
so has part: feature:195525-195641:-1:exon
so has part: feature:193800-193851:-1:exon
so has part: feature:192579-193003:-1:exon

XP_020214201.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:203623-203709:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:201886-201955:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:197646-197902:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:195525-195641:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:193800-193851:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:192579-193003:-1:exon

LOC109798375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798375
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109798375 isoform X1
translation: MPDLPFQVGDLAESRSFQVGYRGAWFRCKIRDIRTKNAAVSHQLEYFDYPDQKLSWIKLYQKPQTTICKSKGFNRELMLRPSFPTFHYESEKLDVNTTSEVIVIVNNLWKVGDLVDWYTDGCYWSGSVTKILGNDKVQIDLLPPPLGEGSSYEALSKDLRPSLDWCPGKGWTVPMPMGDGCMQPCARIVNPANSDGTVKVDQPTVRTYFSPSQNLKGLLDCPDRNGMVFHESDSKVERACFSDNVSSAHIKDASIENLEKANINGGYNEYPAKKRSKKSLCLNSMSSNTIEAAIMDLEELVNRIKWLKGVLNLRMPLSDTKQPSWEFSQHHAPCN
SIO_010081: LOC109798375
subclass of: SO_0000673
so part of: LOC109798375
location: complement(join(192579..193003,193800..193851,195525..195641,197646..197902,201886..201955,203623..203709))
location: region:192579-203709:-1
so has part: feature:203623-203709:-1:exon
so has part: feature:201886-201955:-1:exon
so has part: feature:197646-197902:-1:exon
so has part: feature:195525-195641:-1:exon
so has part: feature:193800-193851:-1:exon
so has part: feature:192579-193003:-1:exon

XP_020214202.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:203623-203709:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:201886-201955:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:197646-197902:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:195525-195641:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:193800-193851:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:192579-193003:-1:exon

LOC109798375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798375
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109798375 isoform X1
translation: MPDLPFQVGDLAESRSFQVGYRGAWFRCKIRDIRTKNAAVSHQLEYFDYPDQKLSWIKLYQKPQTTICKSKGFNRELMLRPSFPTFHYESEKLDVNTTSEVIVIVNNLWKVGDLVDWYTDGCYWSGSVTKILGNDKVQIDLLPPPLGEGSSYEALSKDLRPSLDWCPGKGWTVPMPMGDGCMQPCARIVNPANSDGTVKVDQPTVRTYFSPSQNLKGLLDCPDRNGMVFHESDSKVERACFSDNVSSAHIKDASIENLEKANINGGYNEYPAKKRSKKSLCLNSMSSNTIEAAIMDLEELVNRIKWLKGVLNLRMPLSDTKQPSWEFSQHHAPCN
SIO_010081: LOC109798375
subclass of: SO_0000673
so part of: LOC109798375
location: complement(join(192579..193003,193800..193851,195525..195641,197646..197902,201886..201955,203623..203709))
location: region:192579-203709:-1
so has part: feature:203623-203709:-1:exon
so has part: feature:201886-201955:-1:exon
so has part: feature:197646-197902:-1:exon
so has part: feature:195525-195641:-1:exon
so has part: feature:193800-193851:-1:exon
so has part: feature:192579-193003:-1:exon

XP_020214203.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:203623-203709:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:201886-201955:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:197646-197902:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:195525-195641:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:193800-193851:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:192579-193003:-1:exon

LOC109798375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798375
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109798375 isoform X3
translation: MVSMQELSWIKLYQKPQTTICKSKGFNRELMLRPSFPTFHYESEKLDVNTTSEVIVIVNNLWKVGDLVDWYTDGCYWSGSVTKILGNDKVQIDLLPPPLGEGSSYEALSKDLRPSLDWCPGKGWTVPMPMGDGCMQPCARIVNPANSDGTVKVDQPTVRTYFSPSQNLKGLLDCPDRNGMVFHESDSKVERACFSDNVSSAHIKDASIENLEKANINGGYNEYPAKKRSKKSLCLNSMSSNTIEAAIMDLEELVNRIKWLKGVLNLRMPLSDTKQPSWEFSQHHAPCN
SIO_010081: LOC109798375
subclass of: SO_0000673
so part of: LOC109798375
location: complement(join(192579..193003,193800..193851,195525..195641,197646..197902,203623..203638))
location: region:192579-203638:-1
so has part: feature:203623-203638:-1:exon
so has part: feature:197646-197902:-1:exon
so has part: feature:195525-195641:-1:exon
so has part: feature:193800-193851:-1:exon
so has part: feature:192579-193003:-1:exon

XP_020214205.1
type: Protein
SIO_000068: ncbiprotein

position:203638:-1
position: 203638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203623-203638:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197646-197902:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:195525-195641:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:193800-193851:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:192579-193003:-1:exon

LOC109798375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798375
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109798375 isoform X3
translation: MVSMQELSWIKLYQKPQTTICKSKGFNRELMLRPSFPTFHYESEKLDVNTTSEVIVIVNNLWKVGDLVDWYTDGCYWSGSVTKILGNDKVQIDLLPPPLGEGSSYEALSKDLRPSLDWCPGKGWTVPMPMGDGCMQPCARIVNPANSDGTVKVDQPTVRTYFSPSQNLKGLLDCPDRNGMVFHESDSKVERACFSDNVSSAHIKDASIENLEKANINGGYNEYPAKKRSKKSLCLNSMSSNTIEAAIMDLEELVNRIKWLKGVLNLRMPLSDTKQPSWEFSQHHAPCN
SIO_010081: LOC109798375
subclass of: SO_0000673
so part of: LOC109798375
location: complement(join(192579..193003,193800..193851,195525..195641,197646..197902,203623..203638))
location: region:192579-203638:-1
so has part: feature:203623-203638:-1:exon
so has part: feature:197646-197902:-1:exon
so has part: feature:195525-195641:-1:exon
so has part: feature:193800-193851:-1:exon
so has part: feature:192579-193003:-1:exon

XP_029127079.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:203623-203638:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197646-197902:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:195525-195641:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:193800-193851:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:192579-193003:-1:exon

LOC109799157
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109799157
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(210777..213883)
location: region:210777-213883:-1
so has part: feature:210777-213883:-1:exon
subclass of: SO_0000010

109799157
type: Gene
SIO_000068: ncbigene

position:210777:-1
position: 210777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213883:-1
position: 213883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210777-213883:-1:exon

LOC109799157
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109799157
product: cytochrome P450 72A15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XM_020359687.2
SIO_010081: LOC109799157
subclass of: SO_0000673
so part of: LOC109799157
location: complement(join(210777..211372,211476..211854,212172..212419,212930..213147,213434..213883))
location: region:210777-213883:-1
so has part: feature:213434-213883:-1:exon
so has part: feature:212930-213147:-1:exon
so has part: feature:212172-212419:-1:exon
so has part: feature:211476-211854:-1:exon
so has part: feature:210777-211372:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:213434-213883:-1:exon

position:213434:-1
position: 213434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:212930-213147:-1:exon

position:212930:-1
position: 212930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213147:-1
position: 213147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:212172-212419:-1:exon

position:212172:-1
position: 212172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212419:-1
position: 212419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:211476-211854:-1:exon

position:211476:-1
position: 211476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211854:-1
position: 211854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:210777-211372:-1:exon

position:211372:-1
position: 211372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109799157
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109799157
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome P450 72A15
translation: MSISGRPTEQVTMGGLRISSLNLTPTTLAISTVVATLLIWWFWNALNWVWLRPKRLERRLKEQGLQGNSYRPLVGDIRDMVKMTKEAKSKPMDPHSNDIAPRVLPYVVHTIAKYGKNSFMWLGPRPRLFILDPDKFKEIATKVYEFQKPETSPLFKLLASGFANYDGDKWAKHRKIVSPAFNVEKLKLLVPIFCQSCDDLISKLDSLLSSSNGSCELDVWPLVQNVSSDVLARAGFGSSYEEGRKVFELQREMLQHTMTLFKFAFIPGYRFLPTRTNRRMKAIDEEIRASLMGIINRRLKAIKAGEPTNNDLLGILLESNYKESEKRSGGGMSLREVVEEVKLFYLAGQEANAELLVWTLLLLGKHPDWQEKAREEVFKVFGNEKPDYDRLGQLKIVSMILQESLRLYPPVVMFSRYLRKDTKLGDLTIPAGVELVVPVSMLHQAKEFWGDDAGEFKPERFSEGVSKATRGKLSYLPFGWGPRLCIGQNFGLLEAKVAVSMILQRFSIEFSPSYAHAPSFIITLQPERGAHLILHKL
SIO_010081: LOC109799157
subclass of: SO_0000673
so part of: LOC109799157
location: complement(join(210947..211372,211476..211854,212172..212419,212930..213147,213434..213776))
location: region:210947-213776:-1
so has part: feature:213434-213776:-1:exon
so has part: feature:212930-213147:-1:exon
so has part: feature:212172-212419:-1:exon
so has part: feature:211476-211854:-1:exon
so has part: feature:210947-211372:-1:exon

XP_020215276.1
type: Protein
SIO_000068: ncbiprotein

position:210947:-1
position: 210947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213776:-1
position: 213776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213434-213776:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:212930-213147:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:212172-212419:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:211476-211854:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:210947-211372:-1:exon

LOC109798245
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798245
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(215685..228105)
location: region:215685-228105:-1
so has part: feature:215685-228105:-1:exon
subclass of: SO_0000010

109798245
type: Gene
SIO_000068: ncbigene

position:215685:-1
position: 215685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228105:-1
position: 228105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215685-228105:-1:exon

LOC109798245
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798245
product: queuine tRNA-ribosyltransferase accessory subunit 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XM_020358448.2
SIO_010081: LOC109798245
subclass of: SO_0000673
so part of: LOC109798245
location: complement(join(215685..216158,216268..216387,220696..220830,220927..220975,221398..221449,223518..223588,226962..227055,227225..227383,227506..227680,227766..228105))
location: region:215685-228105:-1
so has part: feature:227766-228105:-1:exon
so has part: feature:227506-227680:-1:exon
so has part: feature:227225-227383:-1:exon
so has part: feature:226962-227055:-1:exon
so has part: feature:223518-223588:-1:exon
so has part: feature:221398-221449:-1:exon
so has part: feature:220927-220975:-1:exon
so has part: feature:220696-220830:-1:exon
so has part: feature:216268-216387:-1:exon
so has part: feature:215685-216158:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:227766-228105:-1:exon

position:227766:-1
position: 227766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:227506-227680:-1:exon

position:227506:-1
position: 227506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227680:-1
position: 227680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:227225-227383:-1:exon

position:227225:-1
position: 227225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227383:-1
position: 227383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:226962-227055:-1:exon

position:226962:-1
position: 226962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227055:-1
position: 227055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:223518-223588:-1:exon

position:223518:-1
position: 223518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223588:-1
position: 223588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:221398-221449:-1:exon

position:221398:-1
position: 221398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221449:-1
position: 221449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:220927-220975:-1:exon

position:220927:-1
position: 220927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220975:-1
position: 220975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:220696-220830:-1:exon

position:220696:-1
position: 220696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220830:-1
position: 220830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:216268-216387:-1:exon

position:216268:-1
position: 216268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216387:-1
position: 216387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:215685-216158:-1:exon

position:216158:-1
position: 216158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109798245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798245
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: queuine tRNA-ribosyltransferase accessory subunit 2
translation: MQMKFVVKTAWNCGGRVGALEMGSCPGPIETPALLLSTRKGLPHFISPDLLTSLPSPDSHLLQISPLHFLEGLASTTISKLGGLHQMLGLHQYGIAAVARDSIQCLPESKGTTKLGASFETPCGRLLIKPKDYVEMISCMKPNIWATLADEVPAWVSDKRNKTSVDRTVRWLDDCLALNPAAGSIFGAIVGGPNLDERKRCAEEVAKRNVSGFWIGGFGLGEGIDERPALLSAIIDVLPDEKPRMISGLGLPEEILEGIDAGIDLFDSTYIYSLTLGGFALTFSLDKSGNQYKYQKSPIESDLTKINLRAKIYRKDMSPILGNCTCYTCKNHTKAYINHLFNVHEMLAQILLEIHNTHHYLTFFHVIREAIKDGRFEKFRQTFIESRRAHYEREAVCA
SIO_010081: LOC109798245
subclass of: SO_0000673
so part of: LOC109798245
location: complement(join(216023..216158,216268..216387,220696..220830,220927..220975,221398..221449,223518..223588,226962..227055,227225..227383,227506..227680,227766..227971))
location: region:216023-227971:-1
so has part: feature:227766-227971:-1:exon
so has part: feature:227506-227680:-1:exon
so has part: feature:227225-227383:-1:exon
so has part: feature:226962-227055:-1:exon
so has part: feature:223518-223588:-1:exon
so has part: feature:221398-221449:-1:exon
so has part: feature:220927-220975:-1:exon
so has part: feature:220696-220830:-1:exon
so has part: feature:216268-216387:-1:exon
so has part: feature:216023-216158:-1:exon

XP_020214037.1
type: Protein
SIO_000068: ncbiprotein

position:216023:-1
position: 216023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227971:-1
position: 227971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227766-227971:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227506-227680:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:227225-227383:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:226962-227055:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:223518-223588:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:221398-221449:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:220927-220975:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:220696-220830:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:216268-216387:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:216023-216158:-1:exon

LOC114915933
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC114915933
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(239693..239826)
location: region:239693-239826:-1
so has part: feature:239693-239826:-1:exon
subclass of: SO_0000578

114915933
type: Gene
SIO_000068: ncbigene

position:239693:-1
position: 239693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239826:-1
position: 239826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239693-239826:-1:exon

LOC114915933
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3821
nc RNA class: snoRNA
gene: LOC114915933
product: small nucleolar RNA Z247
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00321
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003804197.1
SIO_010081: LOC114915933
subclass of: SO_0000673
so part of: LOC114915933
location: complement(239693..239826)
location: region:239693-239826:-1
so has part: feature:239693-239826:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:239693-239826:-1:exon

LOC109799153
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109799153
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 242533..249345
location: region:242533-249345:1
so has part: feature:242533-249345:1:exon
subclass of: SO_0000010

109799153
type: Gene
SIO_000068: ncbigene

position:242533:1
position: 242533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249345:1
position: 249345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242533-249345:1:exon

LOC109799153
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 3821
gene: LOC109799153
product: beta-hexosaminidase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XR_002239845.2
SIO_010081: LOC109799153
so part of: LOC109799153
location: join(242533..243123,243538..243983,245982..246053,249144..249345)
location: region:242533-249345:1
so has part: feature:242533-243123:1:exon
so has part: feature:243538-243983:1:exon
so has part: feature:245982-246053:1:exon
so has part: feature:249144-249345:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:242533-243123:1:exon

position:243123:1
position: 243123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:243538-243983:1:exon

position:243538:1
position: 243538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243983:1
position: 243983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:245982-246053:1:exon

position:245982:1
position: 245982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246053:1
position: 246053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:249144-249345:1:exon

position:249144:1
position: 249144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109799153
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109799153
product: beta-hexosaminidase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_020359682.2
SIO_010081: LOC109799153
subclass of: SO_0000673
so part of: LOC109799153
location: join(242542..243123,243538..244001)
location: region:242542-244001:1
so has part: feature:242542-243123:1:exon
so has part: feature:243538-244001:1:exon

position:242542:1
position: 242542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244001:1
position: 244001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242542-243123:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:243538-244001:1:exon

LOC109799153
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109799153
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-hexosaminidase 1
translation: MFNFLNPGLSLSINGAASTIVRDTFDKYKGILFKHGDMFNFLNPTLSLSRNGVASAIVRDAFDRYKGILFKHGDRFSFLRTLRPAYDVSQMNIIVLSDIEEVQFDTMDLSGNEIVKLENVP
SIO_010081: LOC109799153
subclass of: SO_0000673
so part of: LOC109799153
location: join(242821..243123,243538..243600)
location: region:242821-243600:1
so has part: feature:242821-243123:1:exon
so has part: feature:243538-243600:1:exon

XP_020215271.1
type: Protein
SIO_000068: ncbiprotein

position:242821:1
position: 242821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243600:1
position: 243600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242821-243123:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:243538-243600:1:exon

LOC114915926
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC114915926
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 263035..263593
location: region:263035-263593:1
so has part: feature:263035-263593:1:exon
subclass of: SO_0000011

114915926
type: Gene
SIO_000068: ncbigene

position:263035:1
position: 263035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263593:1
position: 263593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:263035-263593:1:exon

LOC114915926
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3821
nc RNA class: lncRNA
gene: LOC114915926
product: uncharacterized LOC114915926
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XR_003804191.1
SIO_010081: LOC114915926
subclass of: SO_0000673
so part of: LOC114915926
location: join(263035..263213,263340..263593)
location: region:263035-263593:1
so has part: feature:263035-263213:1:exon
so has part: feature:263340-263593:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:263035-263213:1:exon

position:263213:1
position: 263213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:263340-263593:1:exon

position:263340:1
position: 263340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109798511
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798511
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(264405..266283)
location: region:264405-266283:-1
so has part: feature:264405-266283:-1:exon
subclass of: SO_0000010

109798511
type: Gene
SIO_000068: ncbigene

position:264405:-1
position: 264405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266283:-1
position: 266283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264405-266283:-1:exon

LOC109798511
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798511
product: paired amphipathic helix protein Sin3-like 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020358830.1
SIO_010081: LOC109798511
subclass of: SO_0000673
so part of: LOC109798511
location: complement(join(264405..264964,265288..265542,265658..265835,266254..266283))
location: region:264405-266283:-1
so has part: feature:266254-266283:-1:exon
so has part: feature:265658-265835:-1:exon
so has part: feature:265288-265542:-1:exon
so has part: feature:264405-264964:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:266254-266283:-1:exon

position:266254:-1
position: 266254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:265658-265835:-1:exon

position:265658:-1
position: 265658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265835:-1
position: 265835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:265288-265542:-1:exon

position:265288:-1
position: 265288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265542:-1
position: 265542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:264405-264964:-1:exon

position:264964:-1
position: 264964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109798511
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798511
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: paired amphipathic helix protein Sin3-like 4
translation: MHTGRVSWDQVIFSLHIADNILTYVSRVELDMLLLYVTETIEEVVKLLGKINANTTEGCSPICVEEHLTALNFRCIERIYGQHGLDVTNLLKKNASLVLPVILTRLKQKQDELARCRADFNIVWAEIYAKNYHKSLDHRSDYLKQQDTKSLSTTDLLEEIKEISEKKQKENDFLAISAVNRQPIIPLMESGYPDLEIHEDGPNDTEGVVKAKNNSAKSGIAIAKGHVSLGVGSNKMNPKSLNSNRNGNESVQLEESNSCKERKTNEDNMVEEDNYLYLECSTLKPETLRRSTQQGKVNINASIPNEVSRGNKQDHSIEQLVIANASLSSGMDKEWLWSLF
SIO_010081: LOC109798511
subclass of: SO_0000673
so part of: LOC109798511
location: complement(join(264405..264964,265288..265542,265658..265835,266254..266283))
location: region:264405-266283:-1
so has part: feature:266254-266283:-1:exon
so has part: feature:265658-265835:-1:exon
so has part: feature:265288-265542:-1:exon
so has part: feature:264405-264964:-1:exon

XP_020214419.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:266254-266283:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:265658-265835:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:265288-265542:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:264405-264964:-1:exon

LOC109799133
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109799133
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(292677..295806)
location: region:292677-295806:-1
so has part: feature:292677-295806:-1:exon
subclass of: SO_0000010

109799133
type: Gene
SIO_000068: ncbigene

position:292677:-1
position: 292677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295806:-1
position: 295806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292677-295806:-1:exon

LOC109799133
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109799133
product: endoglucanase 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_029271417.1
SIO_010081: LOC109799133
subclass of: SO_0000673
so part of: LOC109799133
location: complement(join(292677..293140,293241..293407,293539..293647,293752..293904,293996..294088,294307..294714,295559..295806))
location: region:292677-295806:-1
so has part: feature:295559-295806:-1:exon
so has part: feature:294307-294714:-1:exon
so has part: feature:293996-294088:-1:exon
so has part: feature:293752-293904:-1:exon
so has part: feature:293539-293647:-1:exon
so has part: feature:293241-293407:-1:exon
so has part: feature:292677-293140:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:295559-295806:-1:exon

position:295559:-1
position: 295559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:294307-294714:-1:exon

position:294307:-1
position: 294307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294714:-1
position: 294714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:293996-294088:-1:exon

position:293996:-1
position: 293996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294088:-1
position: 294088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:293752-293904:-1:exon

position:293752:-1
position: 293752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293904:-1
position: 293904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:293539-293647:-1:exon

position:293539:-1
position: 293539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293647:-1
position: 293647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:293241-293407:-1:exon

position:293241:-1
position: 293241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293407:-1
position: 293407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:292677-293140:-1:exon

position:293140:-1
position: 293140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109799133
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109799133
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endoglucanase 8
translation: MGLAQRWLLIVVGSILSGRGLTLRHNYGEALSKSILFFEGQRSGKLPPTQRMNWRKDSALQDLYILPPSNVSPLPPKVDLVGGYYDAGDNMKFNFPMAFSTTMLAWSVIEFGKFMGPELKHSLDAIRWGTDYLLKATSIPGFVFAQVGDPYADHNCWERPEDMDTPRTAFAVTKDYPASELSAEIAAALAASSIVYRKYHLSYSSRLLKRATMVFDFADKYRGSYNDSLGHWVCPFYCDFSGYQDELVWGAAWLLKATKLPYYLDYIAKNIHNVKNYGEFGWDSKDAGINVLLSKLLMNSSFNSKPFSLNADKFVCSVLPESPSVSVSYSPGGLLFKPGGSNLQHATAFSFLFLVYAGYLKKTNQQIDCSGNVLASPTRLKQIARSQVDYILGSNPENMSYMVGYGGKYPERIHHRASSLPSVDEHRGHIGCKEGSFYFQTQNPNPNLLSGAVVGGPDIKDSYADSRADFAHSEPTTYINAPLVGVLAYFKSHPS
SIO_010081: LOC109799133
subclass of: SO_0000673
so part of: LOC109799133
location: complement(join(292814..293140,293241..293407,293539..293647,293752..293904,293996..294088,294307..294714,295559..295789))
location: region:292814-295789:-1
so has part: feature:295559-295789:-1:exon
so has part: feature:294307-294714:-1:exon
so has part: feature:293996-294088:-1:exon
so has part: feature:293752-293904:-1:exon
so has part: feature:293539-293647:-1:exon
so has part: feature:293241-293407:-1:exon
so has part: feature:292814-293140:-1:exon

XP_029127250.1
type: Protein
SIO_000068: ncbiprotein

position:292814:-1
position: 292814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295789:-1
position: 295789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295559-295789:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:294307-294714:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:293996-294088:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:293752-293904:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:293539-293647:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:293241-293407:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:292814-293140:-1:exon

LOC109799040
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109799040
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 304667..309764
location: region:304667-309764:1
so has part: feature:304667-309764:1:exon
subclass of: SO_0000010

109799040
type: Gene
SIO_000068: ncbigene

position:304667:1
position: 304667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309764:1
position: 309764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304667-309764:1:exon

LOC109799040
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109799040
product: NAC domain-containing protein 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_020359517.2
SIO_010081: LOC109799040
subclass of: SO_0000673
so part of: LOC109799040
location: join(304667..305342,307064..307238,307359..307630,308678..309764)
location: region:304667-309764:1
so has part: feature:304667-305342:1:exon
so has part: feature:307064-307238:1:exon
so has part: feature:307359-307630:1:exon
so has part: feature:308678-309764:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:304667-305342:1:exon

position:305342:1
position: 305342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:307064-307238:1:exon

position:307064:1
position: 307064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307238:1
position: 307238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:307359-307630:1:exon

position:307359:1
position: 307359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307630:1
position: 307630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:308678-309764:1:exon

position:308678:1
position: 308678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109799040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109799040
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NAC domain-containing protein 7
translation: MNTFTHVPPGFRFHPTDEELVDYYLRKKVASRRIDLDVIKDVDLYKIEPWDLQEICRIGTEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRVTTMRKASEHDSPCWYEDQVSFMQDLDSPKQTSQSSLVYQIPYPCKKELDFPYQLPRDHFLQLPLLESPKLLQSSSTMNPNAVAPYVIDHANHSTMLPSSLIQEEQVGHQNFQYGNNNSNEQVAVDQVTDWRVLDKFVASQLSHDASKDNIIFQGTDNGNVVQFRHLDKQEIIMVPEENAPISNSTCPIDLWK
SIO_010081: LOC109799040
subclass of: SO_0000673
so part of: LOC109799040
location: join(307079..307238,307359..307630,308678..309298)
location: region:307079-309298:1
so has part: feature:307079-307238:1:exon
so has part: feature:307359-307630:1:exon
so has part: feature:308678-309298:1:exon

XP_020215106.1
type: Protein
SIO_000068: ncbiprotein

position:307079:1
position: 307079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309298:1
position: 309298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307079-307238:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:307359-307630:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:308678-309298:1:exon

LOC109799150
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109799150
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(317626..324406)
location: region:317626-324406:-1
so has part: feature:317626-324406:-1:exon
subclass of: SO_0000010

109799150
type: Gene
SIO_000068: ncbigene

position:317626:-1
position: 317626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324406:-1
position: 324406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317626-324406:-1:exon

LOC109799150
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109799150
product: agamous-like MADS-box protein AGL12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_020359679.2
SIO_010081: LOC109799150
subclass of: SO_0000673
so part of: LOC109799150
location: complement(join(317626..317951,318058..318099,320826..320867,320972..321071,321565..321626,323800..323881,323999..324406))
location: region:317626-324406:-1
so has part: feature:323999-324406:-1:exon
so has part: feature:323800-323881:-1:exon
so has part: feature:321565-321626:-1:exon
so has part: feature:320972-321071:-1:exon
so has part: feature:320826-320867:-1:exon
so has part: feature:318058-318099:-1:exon
so has part: feature:317626-317951:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:323999-324406:-1:exon

position:323999:-1
position: 323999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:323800-323881:-1:exon

position:323800:-1
position: 323800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323881:-1
position: 323881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:321565-321626:-1:exon

position:321565:-1
position: 321565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321626:-1
position: 321626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:320972-321071:-1:exon

position:320972:-1
position: 320972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321071:-1
position: 321071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:320826-320867:-1:exon

position:320826:-1
position: 320826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320867:-1
position: 320867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:318058-318099:-1:exon

position:318058:-1
position: 318058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318099:-1
position: 318099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:317626-317951:-1:exon

position:317951:-1
position: 317951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109799150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109799150
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: agamous-like MADS-box protein AGL12
translation: MARGKVQLKRIENSVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLVIFSAHGKLYELATKGTMQGLIERYMKFTPGAQPEAAPEAHPLDAKEETNKLKQEIQTLQKGIRYLFGGGNKTMTIDELQILEKNLEMWIYHIRSMKMNIMLQEIQALKDKEGTLKAANKYLQDKIVENTVVYNVAPYATDTPYPLIIQDEVFRLY
SIO_010081: LOC109799150
subclass of: SO_0000673
so part of: LOC109799150
location: complement(join(317856..317951,318058..318099,320826..320867,320972..321071,321565..321626,323800..323881,323999..324180))
location: region:317856-324180:-1
so has part: feature:323999-324180:-1:exon
so has part: feature:323800-323881:-1:exon
so has part: feature:321565-321626:-1:exon
so has part: feature:320972-321071:-1:exon
so has part: feature:320826-320867:-1:exon
so has part: feature:318058-318099:-1:exon
so has part: feature:317856-317951:-1:exon

XP_020215268.1
type: Protein
SIO_000068: ncbiprotein

position:317856:-1
position: 317856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324180:-1
position: 324180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323999-324180:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:323800-323881:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:321565-321626:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:320972-321071:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:320826-320867:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:318058-318099:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:317856-317951:-1:exon

LOC109798845
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798845
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(325897..330501)
location: region:325897-330501:-1
so has part: feature:325897-330501:-1:exon
subclass of: SO_0000010

109798845
type: Gene
SIO_000068: ncbigene

position:325897:-1
position: 325897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330501:-1
position: 330501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:325897-330501:-1:exon

LOC109798845
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798845
product: beta-fructofuranosidase, soluble isoenzyme I
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_020359248.2
SIO_010081: LOC109798845
subclass of: SO_0000673
so part of: LOC109798845
location: complement(join(325897..326450,326622..326709,326800..327026,327111..327272,327889..328745,329620..329628,329930..330501))
location: region:325897-330501:-1
so has part: feature:329930-330501:-1:exon
so has part: feature:329620-329628:-1:exon
so has part: feature:327889-328745:-1:exon
so has part: feature:327111-327272:-1:exon
so has part: feature:326800-327026:-1:exon
so has part: feature:326622-326709:-1:exon
so has part: feature:325897-326450:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:329930-330501:-1:exon

position:329930:-1
position: 329930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:329620-329628:-1:exon

position:329620:-1
position: 329620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329628:-1
position: 329628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:327889-328745:-1:exon

position:327889:-1
position: 327889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328745:-1
position: 328745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:327111-327272:-1:exon

position:327111:-1
position: 327111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327272:-1
position: 327272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:326800-327026:-1:exon

position:326800:-1
position: 326800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327026:-1
position: 327026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:326622-326709:-1:exon

position:326622:-1
position: 326622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326709:-1
position: 326709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:325897-326450:-1:exon

position:326450:-1
position: 326450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109798845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798845
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-fructofuranosidase, soluble isoenzyme I
translation: MKPDVENATQSPLLNPPSDREIGRRAQKGTLVSIASIVFLILSLVALALIIINHEPLEKDQKNNVKSLPLRPRGVAEGVSAKSNPYLSNKASYNWTNAMLSWQRTAFHFQPQTNWMNDPNGPLFYSGWYHIFYQYNPDSAVWGNITWGHAVSRDMIHWLYLPIALVPDTWHDINGVWSGSATLLPDGKIVMLYTGNTAQNVQVQNLAYPANLSDPLLLDWVKYADNPVLVPPPGIGPKDFRDPTTAWIGPDEKWRVTIGSKVNKTGLSLVYRTKDFIHYELSDHYLHAVPGTGMWECVDFFPVSVNGPNGLDSSVNGPEVKHVLKASLDDTKVDHYAIGTYFVENDTWVPDNPHEDVGIGLKLDYGRYYASKTFYDQQKQRRVLWGWINESDSETADLKKGWASLQTIPRTVLFDKKTRTNLLQWPVEEVDSLRLSNFEFEEVVVKPGSVVPLDIGPATQLDIFAEFEIEFLASKGIGKGNVGCGSGAVDRSALGPFGILAIADDQLSELTPIYFHLSSITSDASLTTSFCVDETRSSMAPDVSKLVFESKVPVLSDEKLSMRVLVDHSIIESFAQGGRTVISSRVYPTEAIYGAARLFLFNNATDINIKASLKIWQLNSAFIRPFPFD
SIO_010081: LOC109798845
subclass of: SO_0000673
so part of: LOC109798845
location: complement(join(326256..326450,326622..326709,326800..327026,327111..327272,327889..328745,329620..329628,329930..330281))
location: region:326256-330281:-1
so has part: feature:329930-330281:-1:exon
so has part: feature:329620-329628:-1:exon
so has part: feature:327889-328745:-1:exon
so has part: feature:327111-327272:-1:exon
so has part: feature:326800-327026:-1:exon
so has part: feature:326622-326709:-1:exon
so has part: feature:326256-326450:-1:exon

XP_020214837.1
type: Protein
SIO_000068: ncbiprotein

position:326256:-1
position: 326256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330281:-1
position: 330281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329930-330281:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:329620-329628:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:327889-328745:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:327111-327272:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:326800-327026:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:326622-326709:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:326256-326450:-1:exon

LOC109799021
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109799021
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(335461..341212)
location: region:335461-341212:-1
so has part: feature:335461-341212:-1:exon
subclass of: SO_0000010

109799021
type: Gene
SIO_000068: ncbigene

position:335461:-1
position: 335461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341212:-1
position: 341212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335461-341212:-1:exon

LOC109799021
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109799021
product: trehalose-phosphate phosphatase A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_020359494.2
SIO_010081: LOC109799021
subclass of: SO_0000673
so part of: LOC109799021
location: complement(join(335461..335920,336064..336156,336273..336343,336427..336496,336610..336687,336803..336904,336981..337037,337145..337270,337420..337491,337592..337732,337825..338309,340669..340750,341060..341212))
location: region:335461-341212:-1
so has part: feature:341060-341212:-1:exon
so has part: feature:340669-340750:-1:exon
so has part: feature:337825-338309:-1:exon
so has part: feature:337592-337732:-1:exon
so has part: feature:337420-337491:-1:exon
so has part: feature:337145-337270:-1:exon
so has part: feature:336981-337037:-1:exon
so has part: feature:336803-336904:-1:exon
so has part: feature:336610-336687:-1:exon
so has part: feature:336427-336496:-1:exon
so has part: feature:336273-336343:-1:exon
so has part: feature:336064-336156:-1:exon
so has part: feature:335461-335920:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:341060-341212:-1:exon

position:341060:-1
position: 341060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:340669-340750:-1:exon

position:340669:-1
position: 340669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340750:-1
position: 340750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:337825-338309:-1:exon

position:337825:-1
position: 337825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338309:-1
position: 338309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:337592-337732:-1:exon

position:337592:-1
position: 337592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337732:-1
position: 337732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:337420-337491:-1:exon

position:337420:-1
position: 337420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337491:-1
position: 337491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:337145-337270:-1:exon

position:337145:-1
position: 337145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337270:-1
position: 337270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:336981-337037:-1:exon

position:336981:-1
position: 336981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337037:-1
position: 337037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:336803-336904:-1:exon

position:336803:-1
position: 336803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336904:-1
position: 336904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:336610-336687:-1:exon

position:336610:-1
position: 336610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336687:-1
position: 336687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:336427-336496:-1:exon

position:336427:-1
position: 336427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336496:-1
position: 336496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:336273-336343:-1:exon

position:336273:-1
position: 336273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336343:-1
position: 336343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:336064-336156:-1:exon

position:336064:-1
position: 336064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336156:-1
position: 336156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:335461-335920:-1:exon

position:335920:-1
position: 335920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109799021
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109799021
product: trehalose-phosphate phosphatase A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_020359495.2
SIO_010081: LOC109799021
subclass of: SO_0000673
so part of: LOC109799021
location: complement(join(335461..335920,336064..336156,336273..336343,336427..336496,336610..336687,336803..336904,336981..337037,337145..337270,337420..337491,337592..337732,337825..338309,338624..339724))
location: region:335461-339724:-1
so has part: feature:338624-339724:-1:exon
so has part: feature:337825-338309:-1:exon
so has part: feature:337592-337732:-1:exon
so has part: feature:337420-337491:-1:exon
so has part: feature:337145-337270:-1:exon
so has part: feature:336981-337037:-1:exon
so has part: feature:336803-336904:-1:exon
so has part: feature:336610-336687:-1:exon
so has part: feature:336427-336496:-1:exon
so has part: feature:336273-336343:-1:exon
so has part: feature:336064-336156:-1:exon
so has part: feature:335461-335920:-1:exon

position:339724:-1
position: 339724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338624-339724:-1:exon

position:338624:-1
position: 338624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:337825-338309:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:337592-337732:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:337420-337491:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:337145-337270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:336981-337037:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:336803-336904:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:336610-336687:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:336427-336496:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:336273-336343:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:336064-336156:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:335461-335920:-1:exon

LOC109799021
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109799021
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trehalose-phosphate phosphatase A
translation: MDLKSNHTPVLTDSAPVTKSRLGVHSSLLPYSHTGATFTHGMLLTIPRKKTGILEDVRCSGWLDAMKSSSPPPRKIAKDVSHGFASSDADTAGSYFSWLLKYPSALTSFDQITNYAKGKRIALFMDYDGTLSPIVDNPDCAFMSDNMRTAVKKVAEYFPTAIISGRSRDKVYQFVGLTELYYAGSHGMDIIGPVRQSVSDNHPNCIRSTDKQGTEVNLFQPAAEFLPMINEVLKSLQECTKDIKGAKVENNKFCVSVHYRNVEEKSWDLVGQRVHDVLKDYPRLRLTHGRKVLEVRPVINWDKGKAVTFLLESLGLNNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSAPKESNAVYSLRDPSEVMEFLKSLVLWKSSTLKSLI
SIO_010081: LOC109799021
subclass of: SO_0000673
so part of: LOC109799021
location: complement(join(335858..335920,336064..336156,336273..336343,336427..336496,336610..336687,336803..336904,336981..337037,337145..337270,337420..337491,337592..337732,337825..338121))
location: region:335858-338121:-1
so has part: feature:337825-338121:-1:exon
so has part: feature:337592-337732:-1:exon
so has part: feature:337420-337491:-1:exon
so has part: feature:337145-337270:-1:exon
so has part: feature:336981-337037:-1:exon
so has part: feature:336803-336904:-1:exon
so has part: feature:336610-336687:-1:exon
so has part: feature:336427-336496:-1:exon
so has part: feature:336273-336343:-1:exon
so has part: feature:336064-336156:-1:exon
so has part: feature:335858-335920:-1:exon

XP_020215083.1
type: Protein
SIO_000068: ncbiprotein

position:335858:-1
position: 335858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338121:-1
position: 338121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337825-338121:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:337592-337732:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:337420-337491:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:337145-337270:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:336981-337037:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:336803-336904:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:336610-336687:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:336427-336496:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:336273-336343:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:336064-336156:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:335858-335920:-1:exon

LOC109799021
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109799021
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trehalose-phosphate phosphatase A
translation: MDLKSNHTPVLTDSAPVTKSRLGVHSSLLPYSHTGATFTHGMLLTIPRKKTGILEDVRCSGWLDAMKSSSPPPRKIAKDVSHGFASSDADTAGSYFSWLLKYPSALTSFDQITNYAKGKRIALFMDYDGTLSPIVDNPDCAFMSDNMRTAVKKVAEYFPTAIISGRSRDKVYQFVGLTELYYAGSHGMDIIGPVRQSVSDNHPNCIRSTDKQGTEVNLFQPAAEFLPMINEVLKSLQECTKDIKGAKVENNKFCVSVHYRNVEEKSWDLVGQRVHDVLKDYPRLRLTHGRKVLEVRPVINWDKGKAVTFLLESLGLNNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSAPKESNAVYSLRDPSEVMEFLKSLVLWKSSTLKSLI
SIO_010081: LOC109799021
subclass of: SO_0000673
so part of: LOC109799021
location: complement(join(335858..335920,336064..336156,336273..336343,336427..336496,336610..336687,336803..336904,336981..337037,337145..337270,337420..337491,337592..337732,337825..338121))
location: region:335858-338121:-1
so has part: feature:337825-338121:-1:exon
so has part: feature:337592-337732:-1:exon
so has part: feature:337420-337491:-1:exon
so has part: feature:337145-337270:-1:exon
so has part: feature:336981-337037:-1:exon
so has part: feature:336803-336904:-1:exon
so has part: feature:336610-336687:-1:exon
so has part: feature:336427-336496:-1:exon
so has part: feature:336273-336343:-1:exon
so has part: feature:336064-336156:-1:exon
so has part: feature:335858-335920:-1:exon

XP_020215084.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:337825-338121:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:337592-337732:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:337420-337491:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:337145-337270:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:336981-337037:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:336803-336904:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:336610-336687:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:336427-336496:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:336273-336343:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:336064-336156:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:335858-335920:-1:exon

LOC109798852
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798852
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(353204..356227)
location: region:353204-356227:-1
so has part: feature:353204-356227:-1:exon
subclass of: SO_0000010

109798852
type: Gene
SIO_000068: ncbigene

position:353204:-1
position: 353204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356227:-1
position: 356227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353204-356227:-1:exon

LOC109798852
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798852
product: BAG family molecular chaperone regulator 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_020359259.2
SIO_010081: LOC109798852
subclass of: SO_0000673
so part of: LOC109798852
location: complement(join(353204..353723,354255..354545,355409..356227))
location: region:353204-356227:-1
so has part: feature:355409-356227:-1:exon
so has part: feature:354255-354545:-1:exon
so has part: feature:353204-353723:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:355409-356227:-1:exon

position:355409:-1
position: 355409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:354255-354545:-1:exon

position:354255:-1
position: 354255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354545:-1
position: 354545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:353204-353723:-1:exon

position:353723:-1
position: 353723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109798852
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798852
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BAG family molecular chaperone regulator 7
translation: MSRFRRLHLIQQPSPFCYSETLAFPSFVQDSFSLSLDFPLLPSAFEGFADLVHAPALSYRRLQSDLRLQTLADRVAELESRFERVLGGDRKYTWTAEIKGAERNGFDRKYKWVAEIVEEEEKKKLAKNVKWTAEITGKGEESGSSRKYTFQVESGGAEKKGKEKEKVKEKEKHKKKGNGLRIVEIHEPSDHRDVVLRQAFAKRFGAVQNERGKKKDVSPQDAALLIQITFRAYLIRRSKALRALRELAVAKSKLKEIRAQFNNFAYRRHVARDAEERQRFSEKIIVLLLTVDAIEGADLMVRSAKRSMVDELEAMLDVVDPQPGGRSASASLSFKRRTFDMPDGVIRKEIEEGVAQVVQMLEEAENSSSTFEV
SIO_010081: LOC109798852
subclass of: SO_0000673
so part of: LOC109798852
location: complement(join(353487..353723,354255..354545,355409..356002))
location: region:353487-356002:-1
so has part: feature:355409-356002:-1:exon
so has part: feature:354255-354545:-1:exon
so has part: feature:353487-353723:-1:exon

XP_020214848.1
type: Protein
SIO_000068: ncbiprotein

position:353487:-1
position: 353487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356002:-1
position: 356002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355409-356002:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:354255-354545:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:353487-353723:-1:exon

LOC109799190
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109799190
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 360361..366287
location: region:360361-366287:1
so has part: feature:360361-366287:1:exon
subclass of: SO_0000010

109799190
type: Gene
SIO_000068: ncbigene

position:360361:1
position: 360361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366287:1
position: 366287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360361-366287:1:exon

LOC109799190
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109799190
product: COP9 signalosome complex subunit 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XM_020359731.1
SIO_010081: LOC109799190
subclass of: SO_0000673
so part of: LOC109799190
location: join(360361..360548,360697..360877,360966..361117,361859..361962,362076..362136,362406..362498,362582..362682,363810..363918,364019..364063,364144..364212,364291..364382,364485..364527,365032..365091,365299..365358,365991..366287)
location: region:360361-366287:1
so has part: feature:360361-360548:1:exon
so has part: feature:360697-360877:1:exon
so has part: feature:360966-361117:1:exon
so has part: feature:361859-361962:1:exon
so has part: feature:362076-362136:1:exon
so has part: feature:362406-362498:1:exon
so has part: feature:362582-362682:1:exon
so has part: feature:363810-363918:1:exon
so has part: feature:364019-364063:1:exon
so has part: feature:364144-364212:1:exon
so has part: feature:364291-364382:1:exon
so has part: feature:364485-364527:1:exon
so has part: feature:365032-365091:1:exon
so has part: feature:365299-365358:1:exon
so has part: feature:365991-366287:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:360361-360548:1:exon

position:360548:1
position: 360548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:360697-360877:1:exon

position:360697:1
position: 360697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360877:1
position: 360877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:360966-361117:1:exon

position:360966:1
position: 360966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361117:1
position: 361117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:361859-361962:1:exon

position:361859:1
position: 361859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361962:1
position: 361962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:362076-362136:1:exon

position:362076:1
position: 362076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362136:1
position: 362136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:362406-362498:1:exon

position:362406:1
position: 362406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362498:1
position: 362498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:362582-362682:1:exon

position:362582:1
position: 362582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362682:1
position: 362682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:363810-363918:1:exon

position:363810:1
position: 363810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363918:1
position: 363918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:364019-364063:1:exon

position:364019:1
position: 364019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364063:1
position: 364063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:364144-364212:1:exon

position:364144:1
position: 364144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364212:1
position: 364212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:364291-364382:1:exon

position:364291:1
position: 364291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364382:1
position: 364382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:364485-364527:1:exon

position:364485:1
position: 364485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364527:1
position: 364527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:365032-365091:1:exon

position:365032:1
position: 365032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365091:1
position: 365091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:365299-365358:1:exon

position:365299:1
position: 365299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365358:1
position: 365358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:365991-366287:1:exon

position:365991:1
position: 365991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109799190
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109799190
product: COP9 signalosome complex subunit 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_020359730.1
SIO_010081: LOC109799190
subclass of: SO_0000673
so part of: LOC109799190
location: join(360361..360548,360746..360877,360966..361117,361859..361962,362076..362136,362406..362498,362582..362682,363810..363918,364019..364063,364144..364212,364291..364382,364485..364527,365032..365091,365299..365358,365991..366287)
location: region:360361-366287:1
so has part: feature:360361-360548:1:exon
so has part: feature:360746-360877:1:exon
so has part: feature:360966-361117:1:exon
so has part: feature:361859-361962:1:exon
so has part: feature:362076-362136:1:exon
so has part: feature:362406-362498:1:exon
so has part: feature:362582-362682:1:exon
so has part: feature:363810-363918:1:exon
so has part: feature:364019-364063:1:exon
so has part: feature:364144-364212:1:exon
so has part: feature:364291-364382:1:exon
so has part: feature:364485-364527:1:exon
so has part: feature:365032-365091:1:exon
so has part: feature:365299-365358:1:exon
so has part: feature:365991-366287:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:360361-360548:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:360746-360877:1:exon

position:360746:1
position: 360746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:360966-361117:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:361859-361962:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:362076-362136:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:362406-362498:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:362582-362682:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:363810-363918:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:364019-364063:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:364144-364212:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:364291-364382:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:364485-364527:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:365032-365091:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:365299-365358:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:365991-366287:1:exon

LOC109799190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109799190
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: COP9 signalosome complex subunit 4
translation: MESAFASASAISDQRQKIEQYKSILYAVISSNDIVQARKFIDHMLSDDVPLVVSRQLLQTFAQELGRLEPETQKEIAHYTLAQIQPRVVSFEEQVLVIREKLAELYESEKQWSKAAQMLSGIDLDSGMRVIDDAFRLSKCVQIACLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLKYKVCYARILDLKRKFLEAALRYYDISQIEKRQIGDEEINEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFDELGTLLGIPPHKAEKIASRMIYEDRMRGSIDQVEAVIHFDDDTEELQRWDQQIVGLCQALNDVLDSMAKKGFPVPV
SIO_010081: LOC109799190
subclass of: SO_0000673
so part of: LOC109799190
location: join(360748..360877,360966..361117,361859..361962,362076..362136,362406..362498,362582..362682,363810..363918,364019..364063,364144..364212,364291..364382,364485..364527,365032..365091,365299..365358,365991..366065)
location: region:360748-366065:1
so has part: feature:360748-360877:1:exon
so has part: feature:360966-361117:1:exon
so has part: feature:361859-361962:1:exon
so has part: feature:362076-362136:1:exon
so has part: feature:362406-362498:1:exon
so has part: feature:362582-362682:1:exon
so has part: feature:363810-363918:1:exon
so has part: feature:364019-364063:1:exon
so has part: feature:364144-364212:1:exon
so has part: feature:364291-364382:1:exon
so has part: feature:364485-364527:1:exon
so has part: feature:365032-365091:1:exon
so has part: feature:365299-365358:1:exon
so has part: feature:365991-366065:1:exon

XP_020215319.1
type: Protein
SIO_000068: ncbiprotein

position:360748:1
position: 360748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366065:1
position: 366065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360748-360877:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:360966-361117:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:361859-361962:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:362076-362136:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:362406-362498:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:362582-362682:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:363810-363918:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:364019-364063:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:364144-364212:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:364291-364382:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:364485-364527:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:365032-365091:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:365299-365358:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:365991-366065:1:exon

LOC109799190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109799190
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: COP9 signalosome complex subunit 4
translation: MESAFASASAISDQRQKIEQYKSILYAVISSNDIVQARKFIDHMLSDDVPLVVSRQLLQTFAQELGRLEPETQKEIAHYTLAQIQPRVVSFEEQVLVIREKLAELYESEKQWSKAAQMLSGIDLDSGMRVIDDAFRLSKCVQIACLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLKYKVCYARILDLKRKFLEAALRYYDISQIEKRQIGDEEINEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFDELGTLLGIPPHKAEKIASRMIYEDRMRGSIDQVEAVIHFDDDTEELQRWDQQIVGLCQALNDVLDSMAKKGFPVPV
SIO_010081: LOC109799190
subclass of: SO_0000673
so part of: LOC109799190
location: join(360748..360877,360966..361117,361859..361962,362076..362136,362406..362498,362582..362682,363810..363918,364019..364063,364144..364212,364291..364382,364485..364527,365032..365091,365299..365358,365991..366065)
location: region:360748-366065:1
so has part: feature:360748-360877:1:exon
so has part: feature:360966-361117:1:exon
so has part: feature:361859-361962:1:exon
so has part: feature:362076-362136:1:exon
so has part: feature:362406-362498:1:exon
so has part: feature:362582-362682:1:exon
so has part: feature:363810-363918:1:exon
so has part: feature:364019-364063:1:exon
so has part: feature:364144-364212:1:exon
so has part: feature:364291-364382:1:exon
so has part: feature:364485-364527:1:exon
so has part: feature:365032-365091:1:exon
so has part: feature:365299-365358:1:exon
so has part: feature:365991-366065:1:exon

XP_020215320.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:360748-360877:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:360966-361117:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:361859-361962:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:362076-362136:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:362406-362498:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:362582-362682:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:363810-363918:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:364019-364063:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:364144-364212:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:364291-364382:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:364485-364527:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:365032-365091:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:365299-365358:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:365991-366065:1:exon

LOC109799187
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109799187
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 369896..374626
location: region:369896-374626:1
so has part: feature:369896-374626:1:exon
subclass of: SO_0000010

109799187
type: Gene
SIO_000068: ncbigene

position:369896:1
position: 369896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374626:1
position: 374626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369896-374626:1:exon

LOC109799187
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 3821
gene: LOC109799187
product: autophagy-related protein 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_003804093.1
SIO_010081: LOC109799187
so part of: LOC109799187
location: join(369896..370221,370358..370428,370514..370630,370785..370951,372006..372091,372650..372701,373087..373152,373409..373536,373816..373917,373998..374079,374353..374626)
location: region:369896-374626:1
so has part: feature:369896-370221:1:exon
so has part: feature:370358-370428:1:exon
so has part: feature:370514-370630:1:exon
so has part: feature:370785-370951:1:exon
so has part: feature:372006-372091:1:exon
so has part: feature:372650-372701:1:exon
so has part: feature:373087-373152:1:exon
so has part: feature:373409-373536:1:exon
so has part: feature:373816-373917:1:exon
so has part: feature:373998-374079:1:exon
so has part: feature:374353-374626:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:369896-370221:1:exon

position:370221:1
position: 370221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:370358-370428:1:exon

position:370358:1
position: 370358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370428:1
position: 370428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:370514-370630:1:exon

position:370514:1
position: 370514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370630:1
position: 370630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:370785-370951:1:exon

position:370785:1
position: 370785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370951:1
position: 370951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:372006-372091:1:exon

position:372006:1
position: 372006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372091:1
position: 372091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:372650-372701:1:exon

position:372650:1
position: 372650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372701:1
position: 372701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:373087-373152:1:exon

position:373087:1
position: 373087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373152:1
position: 373152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:373409-373536:1:exon

position:373409:1
position: 373409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373536:1
position: 373536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:373816-373917:1:exon

position:373816:1
position: 373816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373917:1
position: 373917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:373998-374079:1:exon

position:373998:1
position: 373998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374079:1
position: 374079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:374353-374626:1:exon

position:374353:1
position: 374353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109799187
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109799187
product: autophagy-related protein 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_020359727.2
SIO_010081: LOC109799187
subclass of: SO_0000673
so part of: LOC109799187
location: join(369896..370221,370358..370428,370514..370630,370785..370951,372006..372091,372650..372701,373087..373152,373409..373536,373816..373917,374353..374626)
location: region:369896-374626:1
so has part: feature:369896-370221:1:exon
so has part: feature:370358-370428:1:exon
so has part: feature:370514-370630:1:exon
so has part: feature:370785-370951:1:exon
so has part: feature:372006-372091:1:exon
so has part: feature:372650-372701:1:exon
so has part: feature:373087-373152:1:exon
so has part: feature:373409-373536:1:exon
so has part: feature:373816-373917:1:exon
so has part: feature:374353-374626:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:369896-370221:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:370358-370428:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:370514-370630:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:370785-370951:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:372006-372091:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:372650-372701:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:373087-373152:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:373409-373536:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:373816-373917:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:374353-374626:1:exon

LOC109799187
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109799187
product: autophagy-related protein 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XM_020359728.2
SIO_010081: LOC109799187
subclass of: SO_0000673
so part of: LOC109799187
location: join(369896..370221,370358..370428,370514..370630,370785..370951,372018..372091,372650..372701,373087..373152,373409..373536,373816..373917,374353..374626)
location: region:369896-374626:1
so has part: feature:369896-370221:1:exon
so has part: feature:370358-370428:1:exon
so has part: feature:370514-370630:1:exon
so has part: feature:370785-370951:1:exon
so has part: feature:372018-372091:1:exon
so has part: feature:372650-372701:1:exon
so has part: feature:373087-373152:1:exon
so has part: feature:373409-373536:1:exon
so has part: feature:373816-373917:1:exon
so has part: feature:374353-374626:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:369896-370221:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:370358-370428:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:370514-370630:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:370785-370951:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:372018-372091:1:exon

position:372018:1
position: 372018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:372650-372701:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:373087-373152:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:373409-373536:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:373816-373917:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:374353-374626:1:exon

LOC109799187
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109799187
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: autophagy-related protein 3 isoform X1
translation: MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVTAGDNLVAKCPTWSWESGEPGKRKPYLPPEKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDDEDNDGWLATHGKPKETKSDEDENLPSMESLEISGKSPIKQIPSYMGADEEEDIPDMAEFEDTSNVIETDPATLQSTYLVAQEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKTVTIEDHPHLPGKHASIHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKFMASVIPTIEYDYTMDFDLGSTSN
SIO_010081: LOC109799187
subclass of: SO_0000673
so part of: LOC109799187
location: join(370061..370221,370358..370428,370514..370630,370785..370951,372006..372091,372650..372701,373087..373152,373409..373536,373816..373912)
location: region:370061-373912:1
so has part: feature:370061-370221:1:exon
so has part: feature:370358-370428:1:exon
so has part: feature:370514-370630:1:exon
so has part: feature:370785-370951:1:exon
so has part: feature:372006-372091:1:exon
so has part: feature:372650-372701:1:exon
so has part: feature:373087-373152:1:exon
so has part: feature:373409-373536:1:exon
so has part: feature:373816-373912:1:exon

XP_020215316.1
type: Protein
SIO_000068: ncbiprotein

position:370061:1
position: 370061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373912:1
position: 373912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:370061-370221:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:370358-370428:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:370514-370630:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:370785-370951:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:372006-372091:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:372650-372701:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:373087-373152:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:373409-373536:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:373816-373912:1:exon

LOC109799187
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109799187
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: autophagy-related protein 3 isoform X2
translation: MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVTAGDNLVAKCPTWSWESGEPGKRKPYLPPEKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDDEDNDGWLATHGKPKETKSDEDENLPSMESLEISGKSPIKQIPSYMGADEEEDIPDMAEFEDTSNVIETDPSTYLVAQEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKTVTIEDHPHLPGKHASIHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKFMASVIPTIEYDYTMDFDLGSTSN
SIO_010081: LOC109799187
subclass of: SO_0000673
so part of: LOC109799187
location: join(370061..370221,370358..370428,370514..370630,370785..370951,372018..372091,372650..372701,373087..373152,373409..373536,373816..373912)
location: region:370061-373912:1
so has part: feature:370061-370221:1:exon
so has part: feature:370358-370428:1:exon
so has part: feature:370514-370630:1:exon
so has part: feature:370785-370951:1:exon
so has part: feature:372018-372091:1:exon
so has part: feature:372650-372701:1:exon
so has part: feature:373087-373152:1:exon
so has part: feature:373409-373536:1:exon
so has part: feature:373816-373912:1:exon

XP_020215317.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:370061-370221:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:370358-370428:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:370514-370630:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:370785-370951:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:372018-372091:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:372650-372701:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:373087-373152:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:373409-373536:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:373816-373912:1:exon

LOC109798351
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798351
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 375852..380950
location: region:375852-380950:1
so has part: feature:375852-380950:1:exon
subclass of: SO_0000010

109798351
type: Gene
SIO_000068: ncbigene

position:375852:1
position: 375852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380950:1
position: 380950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375852-380950:1:exon

LOC109798351
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798351
product: splicing factor-like protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_020358581.2
SIO_010081: LOC109798351
subclass of: SO_0000673
so part of: LOC109798351
location: join(375852..376159,376469..378688,379844..380950)
location: region:375852-380950:1
so has part: feature:375852-376159:1:exon
so has part: feature:376469-378688:1:exon
so has part: feature:379844-380950:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:375852-376159:1:exon

position:376159:1
position: 376159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:376469-378688:1:exon

position:376469:1
position: 376469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:378688:1
position: 378688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:379844-380950:1:exon

position:379844:1
position: 379844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109798351
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798351
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: splicing factor-like protein 1
translation: MDAVDSTPPLPPLPPYDPSQQDHAPPEYHQSETAQNGTNYGKPSENGDNNNSGSHPSIPKPLLSDNGFTGSGTDKDQSGGEEETTSKRRRRSRWDPQPESNDQSGGESGTGPKKRKSRWADDDPKPVIQLPDFMGGIEFDPEIQALNSRLLEISRMLQSGLPLDDRPEGARSPSPEPIYDNMGIRINTREYRARERLQKERQEIISQIIKKNPAFKPPADYRPPKLQKKLYIPMKEYPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSVKEGRLQQKRDLKPDPSENEDLHVLVEAETPESLEAAAGMVEKLLQPVDEVLNEHKRQQLRELAALNGTIRDEEYCRLCGEPGHRQYACPTRTSTFKSEVVCKHCGDGGHPSIDCPVKGATGKKMDDEYQNFLAELGGSVPESATKQSSTLAIGAGTSGSNPPWANNAGTAGGAPQAGLGAAAVKKEIDDTNLYIGYLPPTLDDDGLIQLFQQFGEIVMAKVIKDRMSGLSKGYGFVKYADITMANNAILAMNGYRLEGRTIAVRVAGKPPQPVVPPGPPASAVPTYPVPSQPLGAYPSQQYAAGGPLGSAPPGSYGGTPVPWGPPVPPPYAPYAPPPPGSTMYPPMQGQPMPPYGVQYPPPVQTGPPGAPSQPATSSEMHPSYPPGVQSDNSTSTQSVPPVNVYGNSVPSMPPAAQPTYPPSYGYPPYYNAVPPPPPPPAPVPVSTSDQSHNIANVPWASNPLVLPPASSVEKTTYGADQSQSIANVPRATNPPVPSPASSAEKTSYAADSEYEKFMAEMK
SIO_010081: LOC109798351
subclass of: SO_0000673
so part of: LOC109798351
location: join(375963..376159,376469..378656)
location: region:375963-378656:1
so has part: feature:375963-376159:1:exon
so has part: feature:376469-378656:1:exon

XP_020214170.1
type: Protein
SIO_000068: ncbiprotein

position:375963:1
position: 375963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:378656:1
position: 378656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375963-376159:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376469-378656:1:exon

LOC109798848
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798848
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 385967..389104
location: region:385967-389104:1
so has part: feature:385967-389104:1:exon
subclass of: SO_0000010

109798848
type: Gene
SIO_000068: ncbigene

position:385967:1
position: 385967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389104:1
position: 389104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:385967-389104:1:exon

LOC109798848
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798848
product: DNA-directed RNA polymerase III subunit rpc4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XM_020359253.2
SIO_010081: LOC109798848
subclass of: SO_0000673
so part of: LOC109798848
location: join(385967..386125,386206..386258,386344..386404,387056..387095,387338..387579,387665..387728,387903..387994,388083..388310,388748..389104)
location: region:385967-389104:1
so has part: feature:385967-386125:1:exon
so has part: feature:386206-386258:1:exon
so has part: feature:386344-386404:1:exon
so has part: feature:387056-387095:1:exon
so has part: feature:387338-387579:1:exon
so has part: feature:387665-387728:1:exon
so has part: feature:387903-387994:1:exon
so has part: feature:388083-388310:1:exon
so has part: feature:388748-389104:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:385967-386125:1:exon

position:386125:1
position: 386125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:386206-386258:1:exon

position:386206:1
position: 386206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:386258:1
position: 386258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:386344-386404:1:exon

position:386344:1
position: 386344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:386404:1
position: 386404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:387056-387095:1:exon

position:387056:1
position: 387056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387095:1
position: 387095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:387338-387579:1:exon

position:387338:1
position: 387338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387579:1
position: 387579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:387665-387728:1:exon

position:387665:1
position: 387665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387728:1
position: 387728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:387903-387994:1:exon

position:387903:1
position: 387903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387994:1
position: 387994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:388083-388310:1:exon

position:388083:1
position: 388083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388310:1
position: 388310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:388748-389104:1:exon

position:388748:1
position: 388748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109798848
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798848
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-directed RNA polymerase III subunit rpc4
translation: MDPDQVSSRTRKLKYPPKPPPKPKLRKPKAEANDKQKEDSAQARSLLRRCESLARPEPKVERKSSAEVAFSPAVSSPSLRTYGTSNGSPSKHFSNEQTLLIRSSAATEEDQNDFRMIDVTDDATNASATNASATRNKGEYKELWDYDHSYYPTTLPLRKPNSGDPEILDEEEFGEAAASVEYDENAVNSAAELGLLEKSEQQTMLFFKFPAALPLEKQNNKGKEKIGTSTVTGEPTKSKGIALEELPRGHMGKMLVYKSGAIKLKLGETLFDVSSGTNCVFAQDIVAMNAAQKQCCNLSKINKRVVVVPDLDSIDL
SIO_010081: LOC109798848
subclass of: SO_0000673
so part of: LOC109798848
location: join(386090..386125,386206..386258,386344..386404,387056..387095,387338..387579,387665..387728,387903..387994,388083..388310,388748..388882)
location: region:386090-388882:1
so has part: feature:386090-386125:1:exon
so has part: feature:386206-386258:1:exon
so has part: feature:386344-386404:1:exon
so has part: feature:387056-387095:1:exon
so has part: feature:387338-387579:1:exon
so has part: feature:387665-387728:1:exon
so has part: feature:387903-387994:1:exon
so has part: feature:388083-388310:1:exon
so has part: feature:388748-388882:1:exon

XP_020214842.1
type: Protein
SIO_000068: ncbiprotein

position:386090:1
position: 386090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388882:1
position: 388882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:386090-386125:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:386206-386258:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:386344-386404:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:387056-387095:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:387338-387579:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:387665-387728:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:387903-387994:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:388083-388310:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:388748-388882:1:exon

LOC109798513
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798513
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 389201..389993
location: region:389201-389993:1
so has part: feature:389201-389993:1:exon
subclass of: SO_0000010

109798513
type: Gene
SIO_000068: ncbigene

position:389201:1
position: 389201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389993:1
position: 389993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:389201-389993:1:exon

LOC109798513
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798513
product: pectinesterase inhibitor 7-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_020358831.1
SIO_010081: LOC109798513
subclass of: SO_0000673
so part of: LOC109798513
location: join(389201..389225,389514..389821,389919..389993)
location: region:389201-389993:1
so has part: feature:389201-389225:1:exon
so has part: feature:389514-389821:1:exon
so has part: feature:389919-389993:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:389201-389225:1:exon

position:389225:1
position: 389225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:389514-389821:1:exon

position:389514:1
position: 389514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389821:1
position: 389821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:389919-389993:1:exon

position:389919:1
position: 389919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109798513
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798513
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pectinesterase inhibitor 7-like
translation: MTNKPVPVIHTTIPFRFSLLLFTFTFTFSHFTLSATTVTTAPDASGNIDFIRASCNTTLYQDLCLSRFAVAVHRNHANLARVAVAVSLSKAHGAAAYRTSQSATEPPHQPRVVLDCSVELFRQILAASIGVLLFE
SIO_010081: LOC109798513
subclass of: SO_0000673
so part of: LOC109798513
location: join(389201..389225,389514..389821,389919..389993)
location: region:389201-389993:1
so has part: feature:389201-389225:1:exon
so has part: feature:389514-389821:1:exon
so has part: feature:389919-389993:1:exon

XP_020214420.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:389201-389225:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:389514-389821:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:389919-389993:1:exon

LOC109798338
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798338
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 397440..402562
location: region:397440-402562:1
so has part: feature:397440-402562:1:exon
subclass of: SO_0000010

109798338
type: Gene
SIO_000068: ncbigene

position:397440:1
position: 397440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402562:1
position: 402562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397440-402562:1:exon

LOC109798338
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798338
product: uncharacterized LOC109798338, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_020358561.2
SIO_010081: LOC109798338
subclass of: SO_0000673
so part of: LOC109798338
location: join(397440..397890,397973..398106,398192..398351,398506..398623,398765..399068,399565..399778,399947..400036,400217..400472,400629..400741,401466..401570,401666..401713,401813..401923,402005..402095,402186..402562)
location: region:397440-402562:1
so has part: feature:397440-397890:1:exon
so has part: feature:397973-398106:1:exon
so has part: feature:398192-398351:1:exon
so has part: feature:398506-398623:1:exon
so has part: feature:398765-399068:1:exon
so has part: feature:399565-399778:1:exon
so has part: feature:399947-400036:1:exon
so has part: feature:400217-400472:1:exon
so has part: feature:400629-400741:1:exon
so has part: feature:401466-401570:1:exon
so has part: feature:401666-401713:1:exon
so has part: feature:401813-401923:1:exon
so has part: feature:402005-402095:1:exon
so has part: feature:402186-402562:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:397440-397890:1:exon

position:397890:1
position: 397890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:397973-398106:1:exon

position:397973:1
position: 397973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398106:1
position: 398106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:398192-398351:1:exon

position:398192:1
position: 398192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398351:1
position: 398351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:398506-398623:1:exon

position:398506:1
position: 398506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398623:1
position: 398623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:398765-399068:1:exon

position:398765:1
position: 398765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399068:1
position: 399068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:399565-399778:1:exon

position:399565:1
position: 399565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399778:1
position: 399778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:399947-400036:1:exon

position:399947:1
position: 399947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400036:1
position: 400036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:400217-400472:1:exon

position:400217:1
position: 400217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400472:1
position: 400472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:400629-400741:1:exon

position:400629:1
position: 400629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400741:1
position: 400741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:401466-401570:1:exon

position:401466:1
position: 401466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401570:1
position: 401570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:401666-401713:1:exon

position:401666:1
position: 401666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401713:1
position: 401713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:401813-401923:1:exon

position:401813:1
position: 401813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401923:1
position: 401923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:402005-402095:1:exon

position:402005:1
position: 402005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402095:1
position: 402095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:402186-402562:1:exon

position:402186:1
position: 402186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109798338
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798338
product: uncharacterized LOC109798338, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_020358559.2
SIO_010081: LOC109798338
subclass of: SO_0000673
so part of: LOC109798338
location: join(397440..397890,397973..398106,398202..398351,398506..398623,398765..399068,399565..399778,399947..400036,400217..400472,400629..400741,401466..401570,401666..401713,401813..401923,402005..402095,402186..402562)
location: region:397440-402562:1
so has part: feature:397440-397890:1:exon
so has part: feature:397973-398106:1:exon
so has part: feature:398202-398351:1:exon
so has part: feature:398506-398623:1:exon
so has part: feature:398765-399068:1:exon
so has part: feature:399565-399778:1:exon
so has part: feature:399947-400036:1:exon
so has part: feature:400217-400472:1:exon
so has part: feature:400629-400741:1:exon
so has part: feature:401466-401570:1:exon
so has part: feature:401666-401713:1:exon
so has part: feature:401813-401923:1:exon
so has part: feature:402005-402095:1:exon
so has part: feature:402186-402562:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:397440-397890:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:397973-398106:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:398202-398351:1:exon

position:398202:1
position: 398202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:398506-398623:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:398765-399068:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:399565-399778:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:399947-400036:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:400217-400472:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:400629-400741:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:401466-401570:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:401666-401713:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:401813-401923:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:402005-402095:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:402186-402562:1:exon

LOC109798338
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798338
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109798338 isoform X1
translation: MALLTFPHFPSLSSFPSTRSFSRTRRYCSMKATGTAILWFKHDLRTDDHPALLAASSTFRSLLPLYVFDRRILSRFSDETLELVLLAVQDLRKSLRDRGSDLMIRFGNAESVIQQLATEVKATCVFAEQEVEYELRFIIDVVRQRLKSVTVSQGTPRIELWQTPFYDVKDLQDLPLSYDEFKKLRFPVTTPLQLSESTLPGAEMELDWGVLPSYDDVKGFMTSNQRKSGENWSLIKETSAETVLRRKVLKSGDSIERSSGFRQTQSRERNGSVFVTQKGSVVGGSTNNVLNALAAYLRYLEGTARDDWQEVHEKVRASESRSGASFNELFGPALSLGLISRRRVHYEAIKYEKERNAGFLSPFGYSAATIAAAVDAVCSMEWYWLVALRNQINNEGIHSTRIWKWKGFLIQYTVAGEDGPAVLLVHGFGAFWEHYRDNIRGLAESGNRVWAITMLGFGKSEKPNVVYTELLWAELLRDFIVDVVGEPVHLVGNSIGGYLVAIVASIWSVLIKSIVLINSAGNVIPSYSYIPLSGIQDRQTSGASWLGSRILLFYLRLRTQEILKKCYPTRVERVDGSLINEILRASYDPGVLVVLESIFSFNLSLPINFLLEDVKEKVLVIQGMKDPISDSNSKVAMLKEHCDGVMIKELDAGHCPHDEVPERVNTIISEWILGVESNILAECPV
SIO_010081: LOC109798338
subclass of: SO_0000673
so part of: LOC109798338
location: join(397668..397890,397973..398106,398202..398351,398506..398623,398765..399068,399565..399778,399947..400036,400217..400472,400629..400741,401466..401570,401666..401713,401813..401923,402005..402095,402186..402286)
location: region:397668-402286:1
so has part: feature:397668-397890:1:exon
so has part: feature:397973-398106:1:exon
so has part: feature:398202-398351:1:exon
so has part: feature:398506-398623:1:exon
so has part: feature:398765-399068:1:exon
so has part: feature:399565-399778:1:exon
so has part: feature:399947-400036:1:exon
so has part: feature:400217-400472:1:exon
so has part: feature:400629-400741:1:exon
so has part: feature:401466-401570:1:exon
so has part: feature:401666-401713:1:exon
so has part: feature:401813-401923:1:exon
so has part: feature:402005-402095:1:exon
so has part: feature:402186-402286:1:exon

XP_020214148.1
type: Protein
SIO_000068: ncbiprotein

position:397668:1
position: 397668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402286:1
position: 402286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397668-397890:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:397973-398106:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:398202-398351:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:398506-398623:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:398765-399068:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:399565-399778:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:399947-400036:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:400217-400472:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:400629-400741:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:401466-401570:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:401666-401713:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:401813-401923:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:402005-402095:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:402186-402286:1:exon

LOC109798338
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798338
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109798338 isoform X2
translation: MRRASFSSLRRRTEQVKATCVFAEQEVEYELRFIIDVVRQRLKSVTVSQGTPRIELWQTPFYDVKDLQDLPLSYDEFKKLRFPVTTPLQLSESTLPGAEMELDWGVLPSYDDVKGFMTSNQRKSGENWSLIKETSAETVLRRKVLKSGDSIERSSGFRQTQSRERNGSVFVTQKGSVVGGSTNNVLNALAAYLRYLEGTARDDWQEVHEKVRASESRSGASFNELFGPALSLGLISRRRVHYEAIKYEKERNAGFLSPFGYSAATIAAAVDAVCSMEWYWLVALRNQINNEGIHSTRIWKWKGFLIQYTVAGEDGPAVLLVHGFGAFWEHYRDNIRGLAESGNRVWAITMLGFGKSEKPNVVYTELLWAELLRDFIVDVVGEPVHLVGNSIGGYLVAIVASIWSVLIKSIVLINSAGNVIPSYSYIPLSGIQDRQTSGASWLGSRILLFYLRLRTQEILKKCYPTRVERVDGSLINEILRASYDPGVLVVLESIFSFNLSLPINFLLEDVKEKVLVIQGMKDPISDSNSKVAMLKEHCDGVMIKELDAGHCPHDEVPERVNTIISEWILGVESNILAECPV
SIO_010081: LOC109798338
subclass of: SO_0000673
so part of: LOC109798338
location: join(398072..398106,398192..398351,398506..398623,398765..399068,399565..399778,399947..400036,400217..400472,400629..400741,401466..401570,401666..401713,401813..401923,402005..402095,402186..402286)
location: region:398072-402286:1
so has part: feature:398072-398106:1:exon
so has part: feature:398192-398351:1:exon
so has part: feature:398506-398623:1:exon
so has part: feature:398765-399068:1:exon
so has part: feature:399565-399778:1:exon
so has part: feature:399947-400036:1:exon
so has part: feature:400217-400472:1:exon
so has part: feature:400629-400741:1:exon
so has part: feature:401466-401570:1:exon
so has part: feature:401666-401713:1:exon
so has part: feature:401813-401923:1:exon
so has part: feature:402005-402095:1:exon
so has part: feature:402186-402286:1:exon

XP_020214150.1
type: Protein
SIO_000068: ncbiprotein

position:398072:1
position: 398072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:398072-398106:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:398192-398351:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:398506-398623:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:398765-399068:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:399565-399778:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:399947-400036:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:400217-400472:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:400629-400741:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:401466-401570:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:401666-401713:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:401813-401923:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:402005-402095:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:402186-402286:1:exon

LOC109799155
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109799155
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 404818..413418
location: region:404818-413418:1
so has part: feature:404818-413418:1:exon
subclass of: SO_0000010

109799155
type: Gene
SIO_000068: ncbigene

position:404818:1
position: 404818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413418:1
position: 413418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404818-413418:1:exon

LOC109799155
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109799155
product: protein RFT1 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_020359684.2
SIO_010081: LOC109799155
subclass of: SO_0000673
so part of: LOC109799155
location: join(404818..405057,405188..405247,405434..405513,405789..405883,406674..406831,407038..407189,407774..407892,408542..408705,408838..408912,409500..409571,410486..410623,411470..411625,412510..412562,412642..412820,412938..413028,413107..413418)
location: region:404818-413418:1
so has part: feature:404818-405057:1:exon
so has part: feature:405188-405247:1:exon
so has part: feature:405434-405513:1:exon
so has part: feature:405789-405883:1:exon
so has part: feature:406674-406831:1:exon
so has part: feature:407038-407189:1:exon
so has part: feature:407774-407892:1:exon
so has part: feature:408542-408705:1:exon
so has part: feature:408838-408912:1:exon
so has part: feature:409500-409571:1:exon
so has part: feature:410486-410623:1:exon
so has part: feature:411470-411625:1:exon
so has part: feature:412510-412562:1:exon
so has part: feature:412642-412820:1:exon
so has part: feature:412938-413028:1:exon
so has part: feature:413107-413418:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:404818-405057:1:exon

position:405057:1
position: 405057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:405188-405247:1:exon

position:405188:1
position: 405188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405247:1
position: 405247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:405434-405513:1:exon

position:405434:1
position: 405434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405513:1
position: 405513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:405789-405883:1:exon

position:405789:1
position: 405789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405883:1
position: 405883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:406674-406831:1:exon

position:406674:1
position: 406674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406831:1
position: 406831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:407038-407189:1:exon

position:407038:1
position: 407038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407189:1
position: 407189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:407774-407892:1:exon

position:407774:1
position: 407774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407892:1
position: 407892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:408542-408705:1:exon

position:408542:1
position: 408542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408705:1
position: 408705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:408838-408912:1:exon

position:408838:1
position: 408838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408912:1
position: 408912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:409500-409571:1:exon

position:409500:1
position: 409500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:409571:1
position: 409571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:410486-410623:1:exon

position:410486:1
position: 410486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:410623:1
position: 410623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:411470-411625:1:exon

position:411470:1
position: 411470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:411625:1
position: 411625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:412510-412562:1:exon

position:412510:1
position: 412510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412562:1
position: 412562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:412642-412820:1:exon

position:412642:1
position: 412642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412820:1
position: 412820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:412938-413028:1:exon

position:412938:1
position: 412938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413028:1
position: 413028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:413107-413418:1:exon

position:413107:1
position: 413107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109799155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109799155
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein RFT1 homolog isoform X1
translation: MSKGKEATNLSRTFKYLLATQFLSRGIPFIFNTWIVRHLTEEDYALYAVQFQLFVTCILFLSREGFRRACLRMDLKCDGTSMGDVVKLMKVVWMSFPLGIFITIVVCLFVFWWQQISYCSPHGQAILINGFACILELLAEPAYILSQNLVLLELRLMVETVATLSRCLTMYFLIVKQIGIEKSIIFALSQSAYGACIFFGYWGYLLLFQKFRASYLFPLREGKVIDFDQQLSKMCILFTFQSFRKLILQEGEKIVLVWLDTPYNQAVYGLVDKLGSLVVRLVFLPFEESSYATFARSASGEYPGKSKKLGNYLTESLKLVLLIGLVFMAFGPSYSYSLIRLLYGEKWSDGEASTALRYYCFYVIVLAMNGTSESFMHAVASESQLKRSNDSLLIFSLIYIVLNVLLIRLAGAVGLIMANSLNMTLRILYSATFIKSYFQGSSSFSFSGCLPSGWIILFLSGIITFISENVFLDRDNFWPSFMIHLSVGLGCFCVSSYVIYCREKPFIRRIIRFNDHLD
SIO_010081: LOC109799155
subclass of: SO_0000673
so part of: LOC109799155
location: join(405193..405247,405434..405513,405789..405883,406674..406831,407038..407189,407774..407892,408542..408705,408838..408912,409500..409571,410486..410623,411470..411625,412510..412562,412642..412820,412938..412998)
location: region:405193-412998:1
so has part: feature:405193-405247:1:exon
so has part: feature:405434-405513:1:exon
so has part: feature:405789-405883:1:exon
so has part: feature:406674-406831:1:exon
so has part: feature:407038-407189:1:exon
so has part: feature:407774-407892:1:exon
so has part: feature:408542-408705:1:exon
so has part: feature:408838-408912:1:exon
so has part: feature:409500-409571:1:exon
so has part: feature:410486-410623:1:exon
so has part: feature:411470-411625:1:exon
so has part: feature:412510-412562:1:exon
so has part: feature:412642-412820:1:exon
so has part: feature:412938-412998:1:exon

XP_020215273.1
type: Protein
SIO_000068: ncbiprotein

position:405193:1
position: 405193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412998:1
position: 412998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405193-405247:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:405434-405513:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:405789-405883:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:406674-406831:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:407038-407189:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:407774-407892:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:408542-408705:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:408838-408912:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:409500-409571:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:410486-410623:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:411470-411625:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:412510-412562:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:412642-412820:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:412938-412998:1:exon

LOC109799155
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109799155
product: protein RFT1 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_020359686.2
SIO_010081: LOC109799155
subclass of: SO_0000673
so part of: LOC109799155
location: join(405788..405914,406674..406831,407038..407189,407774..407892,408542..408705,408838..408912,409500..409571,410486..410623,411470..411625,412510..412562,412642..412820,412938..413028,413107..413418)
location: region:405788-413418:1
so has part: feature:405788-405914:1:exon
so has part: feature:406674-406831:1:exon
so has part: feature:407038-407189:1:exon
so has part: feature:407774-407892:1:exon
so has part: feature:408542-408705:1:exon
so has part: feature:408838-408912:1:exon
so has part: feature:409500-409571:1:exon
so has part: feature:410486-410623:1:exon
so has part: feature:411470-411625:1:exon
so has part: feature:412510-412562:1:exon
so has part: feature:412642-412820:1:exon
so has part: feature:412938-413028:1:exon
so has part: feature:413107-413418:1:exon

position:405788:1
position: 405788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405788-405914:1:exon

position:405914:1
position: 405914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:406674-406831:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:407038-407189:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:407774-407892:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:408542-408705:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:408838-408912:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:409500-409571:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:410486-410623:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:411470-411625:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:412510-412562:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:412642-412820:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:412938-413028:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:413107-413418:1:exon

LOC109799155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109799155
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein RFT1 homolog isoform X2
translation: MGDVVKLMKVVWMSFPLGIFITIVVCLFVFWWQQISYCSPHGQAILINGFACILELLAEPAYILSQNLVLLELRLMVETVATLSRCLTMYFLIVKQIGIEKSIIFALSQSAYGACIFFGYWGYLLLFQKFRASYLFPLREGKVIDFDQQLSKMCILFTFQSFRKLILQEGEKIVLVWLDTPYNQAVYGLVDKLGSLVVRLVFLPFEESSYATFARSASGEYPGKSKKLGNYLTESLKLVLLIGLVFMAFGPSYSYSLIRLLYGEKWSDGEASTALRYYCFYVIVLAMNGTSESFMHAVASESQLKRSNDSLLIFSLIYIVLNVLLIRLAGAVGLIMANSLNMTLRILYSATFIKSYFQGSSSFSFSGCLPSGWIILFLSGIITFISENVFLDRDNFWPSFMIHLSVGLGCFCVSSYVIYCREKPFIRRIIRFNDHLD
SIO_010081: LOC109799155
subclass of: SO_0000673
so part of: LOC109799155
location: join(406687..406831,407038..407189,407774..407892,408542..408705,408838..408912,409500..409571,410486..410623,411470..411625,412510..412562,412642..412820,412938..412998)
location: region:406687-412998:1
so has part: feature:406687-406831:1:exon
so has part: feature:407038-407189:1:exon
so has part: feature:407774-407892:1:exon
so has part: feature:408542-408705:1:exon
so has part: feature:408838-408912:1:exon
so has part: feature:409500-409571:1:exon
so has part: feature:410486-410623:1:exon
so has part: feature:411470-411625:1:exon
so has part: feature:412510-412562:1:exon
so has part: feature:412642-412820:1:exon
so has part: feature:412938-412998:1:exon

XP_020215275.1
type: Protein
SIO_000068: ncbiprotein

position:406687:1
position: 406687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406687-406831:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:407038-407189:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:407774-407892:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:408542-408705:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:408838-408912:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:409500-409571:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:410486-410623:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:411470-411625:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:412510-412562:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:412642-412820:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:412938-412998:1:exon

LOC109798726
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798726
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 427507..431759
location: region:427507-431759:1
so has part: feature:427507-431759:1:exon
subclass of: SO_0000010

109798726
type: Gene
SIO_000068: ncbigene

position:427507:1
position: 427507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431759:1
position: 431759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:427507-431759:1:exon

LOC109798726
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798726
product: leucine-rich repeat receptor-like protein kinase TDR
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_020359102.2
SIO_010081: LOC109798726
subclass of: SO_0000673
so part of: LOC109798726
location: join(427507..430661,431103..431759)
location: region:427507-431759:1
so has part: feature:427507-430661:1:exon
so has part: feature:431103-431759:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:427507-430661:1:exon

position:430661:1
position: 430661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:431103-431759:1:exon

position:431103:1
position: 431103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109798726
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798726
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat receptor-like protein kinase TDR
translation: MKPFLLFLTFSFLCQTHPLLVFSATTLPLQLITLLSIKSSLLDPLNNLHDWDPSPTSNSNHQDPIWCSWRGITCHPKTSQITTLDLSHLNLSGTVSPQIRHLSTLNHLNLSGNDFSGSFQSSIFELTELRTLDISRNSFNSTFPPGISKLKFLRFFNAYSNSFTGSLPQDLTGLRFLEQLNLGGSYFSGTIPPGYGTFPRLKFIDLAGNNLVGPLPPQLGHLAELEHLEIGYNNFSGTLPLELALLSNLKYLDISTANISGNVIPELGNLTKLETLLLFRNRLTGEIPPSIGKLKSLKGLDLSDNELTGPIPTQVTMLKELTMLNLMNNNLTGEIPEGIGELPKLETLFLFNNSLTGTLPQQLGSNGLLQRLDVSTNSLEGPIPRNVCNGNKLVRLILFLNNFTRSLPPSLANCTSLTRVRIQNNFLNGSIPQGLTLLPNLTFLDLSNNNFQGQVPEHLGNLQYFNISGNSFGTPLPSSIWNATNLQIFSAAFSNITGQIPDFIGCQTLYKLELHGNAINGTIPWDIGHCQKLIVLNLSRNALTGIIPWEISVLPSITDVDLSHNSLTGTIPSNFNNCTTLENFNVSFNSLTGPIPSSGIFPNLHPSSYSGNQGLCGGVLAKPCAADALAAAENQVDVRRQQPKKTAGAIVWIVAAAFGIGLFVLVAGTRCFHANYKRRFGDEVGPWKLTAFQRLNFRAEDVLECLSMSDKILGMGSTGTVYRAEMPGGEMIAVKKLWGKQKENIRRRRGVLAEVEVLGNVRHRNIVRLLGCCSNRECTMLLYEYMPNGNLDDLLHAKNKGDNLVADWFTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDADMEARVADFGVAKLIQTDESMSVIAGSYGYIAPEYAYTLQVDEKSDIYSYGVVLMEILSGKRSVDSEFGDGNSIVDWVRSKIKSKDGVNDILDKNAGAGCTPVREEMIQMLRIALLCTSRNPADRPSMRDVVLMLQEAKPKRKLLHSVGDNVLAVADIPLPQKPNLDQC
SIO_010081: LOC109798726
subclass of: SO_0000673
so part of: LOC109798726
location: join(428021..430661,431103..431512)
location: region:428021-431512:1
so has part: feature:428021-430661:1:exon
so has part: feature:431103-431512:1:exon

XP_020214691.1
type: Protein
SIO_000068: ncbiprotein

position:428021:1
position: 428021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431512:1
position: 431512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428021-430661:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:431103-431512:1:exon

LOC109798699
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798699
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 436081..444323
location: region:436081-444323:1
so has part: feature:436081-444323:1:exon
subclass of: SO_0000011

109798699
type: Gene
SIO_000068: ncbigene

position:436081:1
position: 436081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444323:1
position: 444323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:436081-444323:1:exon

LOC109798699
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3821
nc RNA class: lncRNA
gene: LOC109798699
product: uncharacterized LOC109798699
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XR_002239812.2
SIO_010081: LOC109798699
subclass of: SO_0000673
so part of: LOC109798699
location: join(436081..436405,443086..443142,443911..444323)
location: region:436081-444323:1
so has part: feature:436081-436405:1:exon
so has part: feature:443086-443142:1:exon
so has part: feature:443911-444323:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:436081-436405:1:exon

position:436405:1
position: 436405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:443086-443142:1:exon

position:443086:1
position: 443086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443142:1
position: 443142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:443911-444323:1:exon

position:443911:1
position: 443911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109799182
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109799182
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 448673..467105
location: region:448673-467105:1
so has part: feature:448673-467105:1:exon
subclass of: SO_0000010

109799182
type: Gene
SIO_000068: ncbigene

position:448673:1
position: 448673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:467105:1
position: 467105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:448673-467105:1:exon

LOC109799182
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109799182
product: structural maintenance of chromosomes protein 6B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_020359719.2
SIO_010081: LOC109799182
subclass of: SO_0000673
so part of: LOC109799182
location: join(448673..449002,449170..449275,450813..450946,451349..451404,451792..451878,451952..452139,452894..453026,455477..455596,455981..456115,456864..456940,457023..457098,458174..458248,458427..458531,459245..459414,459518..459620,461412..461524,462238..462442,462855..462986,463144..463258,463373..463458,463565..463660,464535..464671,464788..464890,465626..465705,465810..465888,466124..466181,466448..466545,466646..466740,466870..467105)
location: region:448673-467105:1
so has part: feature:448673-449002:1:exon
so has part: feature:449170-449275:1:exon
so has part: feature:450813-450946:1:exon
so has part: feature:451349-451404:1:exon
so has part: feature:451792-451878:1:exon
so has part: feature:451952-452139:1:exon
so has part: feature:452894-453026:1:exon
so has part: feature:455477-455596:1:exon
so has part: feature:455981-456115:1:exon
so has part: feature:456864-456940:1:exon
so has part: feature:457023-457098:1:exon
so has part: feature:458174-458248:1:exon
so has part: feature:458427-458531:1:exon
so has part: feature:459245-459414:1:exon
so has part: feature:459518-459620:1:exon
so has part: feature:461412-461524:1:exon
so has part: feature:462238-462442:1:exon
so has part: feature:462855-462986:1:exon
so has part: feature:463144-463258:1:exon
so has part: feature:463373-463458:1:exon
so has part: feature:463565-463660:1:exon
so has part: feature:464535-464671:1:exon
so has part: feature:464788-464890:1:exon
so has part: feature:465626-465705:1:exon
so has part: feature:465810-465888:1:exon
so has part: feature:466124-466181:1:exon
so has part: feature:466448-466545:1:exon
so has part: feature:466646-466740:1:exon
so has part: feature:466870-467105:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:448673-449002:1:exon

position:449002:1
position: 449002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:449170-449275:1:exon

position:449170:1
position: 449170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449275:1
position: 449275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:450813-450946:1:exon

position:450813:1
position: 450813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450946:1
position: 450946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:451349-451404:1:exon

position:451349:1
position: 451349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451404:1
position: 451404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:451792-451878:1:exon

position:451792:1
position: 451792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451878:1
position: 451878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:451952-452139:1:exon

position:451952:1
position: 451952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452139:1
position: 452139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:452894-453026:1:exon

position:452894:1
position: 452894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453026:1
position: 453026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:455477-455596:1:exon

position:455477:1
position: 455477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455596:1
position: 455596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:455981-456115:1:exon

position:455981:1
position: 455981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456115:1
position: 456115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:456864-456940:1:exon

position:456864:1
position: 456864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456940:1
position: 456940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:457023-457098:1:exon

position:457023:1
position: 457023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457098:1
position: 457098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:458174-458248:1:exon

position:458174:1
position: 458174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458248:1
position: 458248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:458427-458531:1:exon

position:458427:1
position: 458427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458531:1
position: 458531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:459245-459414:1:exon

position:459245:1
position: 459245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459414:1
position: 459414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:459518-459620:1:exon

position:459518:1
position: 459518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459620:1
position: 459620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:461412-461524:1:exon

position:461412:1
position: 461412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461524:1
position: 461524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:462238-462442:1:exon

position:462238:1
position: 462238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462442:1
position: 462442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:462855-462986:1:exon

position:462855:1
position: 462855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462986:1
position: 462986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:463144-463258:1:exon

position:463144:1
position: 463144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463258:1
position: 463258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:463373-463458:1:exon

position:463373:1
position: 463373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463458:1
position: 463458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:463565-463660:1:exon

position:463565:1
position: 463565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463660:1
position: 463660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:464535-464671:1:exon

position:464535:1
position: 464535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464671:1
position: 464671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:464788-464890:1:exon

position:464788:1
position: 464788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464890:1
position: 464890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:465626-465705:1:exon

position:465626:1
position: 465626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465705:1
position: 465705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:465810-465888:1:exon

position:465810:1
position: 465810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465888:1
position: 465888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:466124-466181:1:exon

position:466124:1
position: 466124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466181:1
position: 466181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:466448-466545:1:exon

position:466448:1
position: 466448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466545:1
position: 466545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:466646-466740:1:exon

position:466646:1
position: 466646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466740:1
position: 466740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:466870-467105:1:exon

position:466870:1
position: 466870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109799182
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109799182
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: structural maintenance of chromosomes protein 6B
translation: MEESSSRVSPTLHQPTAGIIKRLRLENFMCHSKHETDFGNHVNFITGQNGSGKSAILTALCVAFGCRAKGTQRASTLKDFIKTGASNAVIQVEIQNEGEDAFKPDIYGDVIIVERRLSESTSSTTLKDHQGRKVVSRKADLLEIVEHFNIDVENPCVIMSQDKSREFLHSGNNKDKFKFFYKATLLQQVNDLLESISKEIIAAHDIVEELETAIRPIEKELHELQGKIRTMEHVEQISIQVQQLKKKLAWSWVYDVDKQLEEQNIKIEKLKNRIPTCQAKIDQQLHRIEKLMESCSKKRAEIKSMLATTSEVKQMKENLNQSVSMAKKEAFVLERDCKSKTGNIQKMIQQLKKLEQQVHDIREQHIKNTQAEESDKEEKLKGLKDEVHAAELELNRLKDEDASIMDCIHRQNEEIQKIADKIRDHEKNRHYITCRIRDLQKHQSNKITVFGGEKVIDLLRIIERHHQKFKMPPIGPIGAHLKLLHGNKWAVALEYAIGKLLNSFIVTDHTDFRLLKQCAKEANYGHLQIIIYDFSTPRLMMPQHMLPDTEHPSVLSVLQCENHTVINVLVDLGNVERQVLVNDYETGKVVAFERRIRNLKEVYASNGCRMFSRGSVQTVLPPNKKQRTGRLCGSFEDEIEKLHAEADDELKAADDCKRIKRAAEVKLEELDKKVNSIKRQCVNAGKSFTSKKVALEEEMHLHTAENSATSLSTVDELIEEISEIQKNIDKEQVLLEGLQQKGCEAAGKADDLKVKFDKLCESANDEIAALEKSESDLVEIEKEMDSAKKAKEHYEGVMKNKVLLDIKEAEEHYLELTKRREESVEKASIICSQNELDSLGGCHGNTPEQISAQVERLNQTLKRESQRYSESIDDLRMLYKKKERKIMKRQQVYKTLRQKLDACQRALELRQRKFKRNATYLKHQLSWKFNGHLRKKGISGLIKVNYEEKTLMIEVQMPQDASNRAVRDTRGLSGGERSFSTLCFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFAEAHGSQWIFITPHDTSMVRAGNRIKKMQMAAPRS
SIO_010081: LOC109799182
subclass of: SO_0000673
so part of: LOC109799182
location: join(448852..449002,449170..449275,450813..450946,451349..451404,451792..451878,451952..452139,452894..453026,455477..455596,455981..456115,456864..456940,457023..457098,458174..458248,458427..458531,459245..459414,459518..459620,461412..461524,462238..462442,462855..462986,463144..463258,463373..463458,463565..463660,464535..464671,464788..464890,465626..465705,465810..465888,466124..466181,466448..466545,466646..466740,466870..466927)
location: region:448852-466927:1
so has part: feature:448852-449002:1:exon
so has part: feature:449170-449275:1:exon
so has part: feature:450813-450946:1:exon
so has part: feature:451349-451404:1:exon
so has part: feature:451792-451878:1:exon
so has part: feature:451952-452139:1:exon
so has part: feature:452894-453026:1:exon
so has part: feature:455477-455596:1:exon
so has part: feature:455981-456115:1:exon
so has part: feature:456864-456940:1:exon
so has part: feature:457023-457098:1:exon
so has part: feature:458174-458248:1:exon
so has part: feature:458427-458531:1:exon
so has part: feature:459245-459414:1:exon
so has part: feature:459518-459620:1:exon
so has part: feature:461412-461524:1:exon
so has part: feature:462238-462442:1:exon
so has part: feature:462855-462986:1:exon
so has part: feature:463144-463258:1:exon
so has part: feature:463373-463458:1:exon
so has part: feature:463565-463660:1:exon
so has part: feature:464535-464671:1:exon
so has part: feature:464788-464890:1:exon
so has part: feature:465626-465705:1:exon
so has part: feature:465810-465888:1:exon
so has part: feature:466124-466181:1:exon
so has part: feature:466448-466545:1:exon
so has part: feature:466646-466740:1:exon
so has part: feature:466870-466927:1:exon

XP_020215308.1
type: Protein
SIO_000068: ncbiprotein

position:448852:1
position: 448852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466927:1
position: 466927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:448852-449002:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:449170-449275:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:450813-450946:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:451349-451404:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:451792-451878:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:451952-452139:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:452894-453026:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:455477-455596:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:455981-456115:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:456864-456940:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:457023-457098:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:458174-458248:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:458427-458531:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:459245-459414:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:459518-459620:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:461412-461524:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:462238-462442:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:462855-462986:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:463144-463258:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:463373-463458:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:463565-463660:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:464535-464671:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:464788-464890:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:465626-465705:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:465810-465888:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:466124-466181:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:466448-466545:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:466646-466740:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:466870-466927:1:exon

LOC109798672
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798672
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 470057..480382
location: region:470057-480382:1
so has part: feature:470057-480382:1:exon
subclass of: SO_0000011

109798672
type: Gene
SIO_000068: ncbigene

position:470057:1
position: 470057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480382:1
position: 480382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:470057-480382:1:exon

LOC109798672
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3821
nc RNA class: lncRNA
gene: LOC109798672
product: uncharacterized LOC109798672, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XR_003804098.1
SIO_010081: LOC109798672
subclass of: SO_0000673
so part of: LOC109798672
location: join(470057..470303,479615..479701,479787..480382)
location: region:470057-480382:1
so has part: feature:470057-470303:1:exon
so has part: feature:479615-479701:1:exon
so has part: feature:479787-480382:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:470057-470303:1:exon

position:470303:1
position: 470303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:479615-479701:1:exon

position:479615:1
position: 479615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479701:1
position: 479701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:479787-480382:1:exon

position:479787:1
position: 479787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109798672
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3821
nc RNA class: lncRNA
gene: LOC109798672
product: uncharacterized LOC109798672, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_003804099.1
SIO_010081: LOC109798672
subclass of: SO_0000673
so part of: LOC109798672
location: join(470063..471489,473552..475909,479615..479701,479787..480382)
location: region:470063-480382:1
so has part: feature:470063-471489:1:exon
so has part: feature:473552-475909:1:exon
so has part: feature:479615-479701:1:exon
so has part: feature:479787-480382:1:exon

position:470063:1
position: 470063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:470063-471489:1:exon

position:471489:1
position: 471489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:473552-475909:1:exon

position:473552:1
position: 473552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475909:1
position: 475909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:479615-479701:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:479787-480382:1:exon

LOC109798672
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3821
nc RNA class: lncRNA
gene: LOC109798672
product: uncharacterized LOC109798672, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_003804100.1
SIO_010081: LOC109798672
subclass of: SO_0000673
so part of: LOC109798672
location: join(470064..471334,471420..471489,473552..475909,479615..479701,479787..480382)
location: region:470064-480382:1
so has part: feature:470064-471334:1:exon
so has part: feature:471420-471489:1:exon
so has part: feature:473552-475909:1:exon
so has part: feature:479615-479701:1:exon
so has part: feature:479787-480382:1:exon

position:470064:1
position: 470064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:470064-471334:1:exon

position:471334:1
position: 471334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:471420-471489:1:exon

position:471420:1
position: 471420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:473552-475909:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:479615-479701:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:479787-480382:1:exon

LOC109798672
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3821
nc RNA class: lncRNA
gene: LOC109798672
product: uncharacterized LOC109798672, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_003804095.1
SIO_010081: LOC109798672
subclass of: SO_0000673
so part of: LOC109798672
location: join(470064..471334,473552..475967,479615..479701,479787..480382)
location: region:470064-480382:1
so has part: feature:470064-471334:1:exon
so has part: feature:473552-475967:1:exon
so has part: feature:479615-479701:1:exon
so has part: feature:479787-480382:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:470064-471334:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:473552-475967:1:exon

position:475967:1
position: 475967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:479615-479701:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:479787-480382:1:exon

LOC109798672
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3821
nc RNA class: lncRNA
gene: LOC109798672
product: uncharacterized LOC109798672, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XR_003804096.1
SIO_010081: LOC109798672
subclass of: SO_0000673
so part of: LOC109798672
location: join(470065..471334,473552..475913,479615..479701,479787..480382)
location: region:470065-480382:1
so has part: feature:470065-471334:1:exon
so has part: feature:473552-475913:1:exon
so has part: feature:479615-479701:1:exon
so has part: feature:479787-480382:1:exon

position:470065:1
position: 470065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:470065-471334:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:473552-475913:1:exon

position:475913:1
position: 475913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:479615-479701:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:479787-480382:1:exon

LOC109798672
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3821
nc RNA class: lncRNA
gene: LOC109798672
product: uncharacterized LOC109798672, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XR_003804094.1
SIO_010081: LOC109798672
subclass of: SO_0000673
so part of: LOC109798672
location: join(470065..471334,473552..475909,479615..479701,479787..480382)
location: region:470065-480382:1
so has part: feature:470065-471334:1:exon
so has part: feature:473552-475909:1:exon
so has part: feature:479615-479701:1:exon
so has part: feature:479787-480382:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:470065-471334:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:473552-475909:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:479615-479701:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:479787-480382:1:exon

LOC109798672
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3821
nc RNA class: lncRNA
gene: LOC109798672
product: uncharacterized LOC109798672, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XR_003804101.1
SIO_010081: LOC109798672
subclass of: SO_0000673
so part of: LOC109798672
location: join(470070..471334,471420..471489,479615..479701,479787..480382)
location: region:470070-480382:1
so has part: feature:470070-471334:1:exon
so has part: feature:471420-471489:1:exon
so has part: feature:479615-479701:1:exon
so has part: feature:479787-480382:1:exon

position:470070:1
position: 470070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:470070-471334:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:471420-471489:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:479615-479701:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:479787-480382:1:exon

LOC109798672
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3821
nc RNA class: lncRNA
gene: LOC109798672
product: uncharacterized LOC109798672, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XR_003804097.1
SIO_010081: LOC109798672
subclass of: SO_0000673
so part of: LOC109798672
location: join(470074..471334,479615..479701,479787..480382)
location: region:470074-480382:1
so has part: feature:470074-471334:1:exon
so has part: feature:479615-479701:1:exon
so has part: feature:479787-480382:1:exon

position:470074:1
position: 470074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:470074-471334:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:479615-479701:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:479787-480382:1:exon

LOC109798819
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798819
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 486702..489557
location: region:486702-489557:1
so has part: feature:486702-489557:1:exon
subclass of: SO_0000010

109798819
type: Gene
SIO_000068: ncbigene

position:486702:1
position: 486702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:489557:1
position: 489557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486702-489557:1:exon

LOC109798819
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798819
product: F-box protein At5g07670
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_020359214.2
SIO_010081: LOC109798819
subclass of: SO_0000673
so part of: LOC109798819
location: join(486702..488078,488920..489557)
location: region:486702-489557:1
so has part: feature:486702-488078:1:exon
so has part: feature:488920-489557:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:486702-488078:1:exon

position:488078:1
position: 488078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:488920-489557:1:exon

position:488920:1
position: 488920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109798819
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798819
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box protein At5g07670
translation: MSFRSENQNPNPNPNPNPSPTPPSKKRWSDIWLRSKPLTEMVMAMKLQSPLAIADRTLLLSDELLLKILAAISDSQTQRNANSLVCKRWLNLQGRLLRSLAISDWNFLLSGRLIHRFPNLNHVDLTSATFVSPRNSGILLSNRVLTVHLTAATSPNWCFCEDAMLPVEVIDTGLASLAAACPNLRRLRLIGASEMGVLSVAEDCPTLQDLELQRCSDAVLRGIAACRNLQILKLVGHVDGFYNSVVSDIGLTILAQGCKRLVKLELSGCEGSFDGVKAIGKCCQMLEELTFSDHRMDDGWLAALSFCENLKTLRIVSCKRIDSNPGMEEYLGSCSALERLHLEKCLLRDKKSVAALFSVCRNVREVVLQDCWGFDDGIFSLAITCRRVKLLYLEGCSLITTDGLESVIHSWKELQRLRVVSCKNIKDNEISPALATLFTTLKELRWSPDTKSLLPSSLAGTTMGKKGGKFFRRTR
SIO_010081: LOC109798819
subclass of: SO_0000673
so part of: LOC109798819
location: join(486922..488078,488920..489190)
location: region:486922-489190:1
so has part: feature:486922-488078:1:exon
so has part: feature:488920-489190:1:exon

XP_020214803.1
type: Protein
SIO_000068: ncbiprotein

position:486922:1
position: 486922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:489190:1
position: 489190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486922-488078:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:488920-489190:1:exon

LOC109798865
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798865
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 492144..499024
location: region:492144-499024:1
so has part: feature:492144-499024:1:exon
subclass of: SO_0000010

109798865
type: Gene
SIO_000068: ncbigene

position:492144:1
position: 492144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499024:1
position: 499024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492144-499024:1:exon

LOC109798865
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798865
product: uncharacterized LOC109798865, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XM_020359280.2
SIO_010081: LOC109798865
subclass of: SO_0000673
so part of: LOC109798865
location: join(492144..492426,492494..492577,492693..492766,492853..492886,493315..493373,493772..493886,494127..494164,494684..494781,494972..495027,496079..496355,496470..496582,497054..497110,497326..497391,497722..497796,498254..498335,498662..499024)
location: region:492144-499024:1
so has part: feature:492144-492426:1:exon
so has part: feature:492494-492577:1:exon
so has part: feature:492693-492766:1:exon
so has part: feature:492853-492886:1:exon
so has part: feature:493315-493373:1:exon
so has part: feature:493772-493886:1:exon
so has part: feature:494127-494164:1:exon
so has part: feature:494684-494781:1:exon
so has part: feature:494972-495027:1:exon
so has part: feature:496079-496355:1:exon
so has part: feature:496470-496582:1:exon
so has part: feature:497054-497110:1:exon
so has part: feature:497326-497391:1:exon
so has part: feature:497722-497796:1:exon
so has part: feature:498254-498335:1:exon
so has part: feature:498662-499024:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:492144-492426:1:exon

position:492426:1
position: 492426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:492494-492577:1:exon

position:492494:1
position: 492494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492577:1
position: 492577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:492693-492766:1:exon

position:492693:1
position: 492693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492766:1
position: 492766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:492853-492886:1:exon

position:492853:1
position: 492853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492886:1
position: 492886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:493315-493373:1:exon

position:493315:1
position: 493315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:493373:1
position: 493373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:493772-493886:1:exon

position:493772:1
position: 493772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:493886:1
position: 493886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:494127-494164:1:exon

position:494127:1
position: 494127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494164:1
position: 494164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:494684-494781:1:exon

position:494684:1
position: 494684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494781:1
position: 494781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:494972-495027:1:exon

position:494972:1
position: 494972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495027:1
position: 495027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:496079-496355:1:exon

position:496079:1
position: 496079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496355:1
position: 496355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:496470-496582:1:exon

position:496470:1
position: 496470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496582:1
position: 496582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:497054-497110:1:exon

position:497054:1
position: 497054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497110:1
position: 497110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:497326-497391:1:exon

position:497326:1
position: 497326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497391:1
position: 497391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:497722-497796:1:exon

position:497722:1
position: 497722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497796:1
position: 497796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:498254-498335:1:exon

position:498254:1
position: 498254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498335:1
position: 498335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:498662-499024:1:exon

position:498662:1
position: 498662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109798865
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798865
product: uncharacterized LOC109798865, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_029271248.1
SIO_010081: LOC109798865
subclass of: SO_0000673
so part of: LOC109798865
location: join(492144..492426,492494..492577,492693..492766,492853..492886,493315..493373,493772..493886,494127..494164,494684..494781,494972..495027,496079..496355,496470..496582,497054..497110,497326..497391,497722..497796,497876..498179)
location: region:492144-498179:1
so has part: feature:492144-492426:1:exon
so has part: feature:492494-492577:1:exon
so has part: feature:492693-492766:1:exon
so has part: feature:492853-492886:1:exon
so has part: feature:493315-493373:1:exon
so has part: feature:493772-493886:1:exon
so has part: feature:494127-494164:1:exon
so has part: feature:494684-494781:1:exon
so has part: feature:494972-495027:1:exon
so has part: feature:496079-496355:1:exon
so has part: feature:496470-496582:1:exon
so has part: feature:497054-497110:1:exon
so has part: feature:497326-497391:1:exon
so has part: feature:497722-497796:1:exon
so has part: feature:497876-498179:1:exon

position:498179:1
position: 498179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492144-492426:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:492494-492577:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:492693-492766:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:492853-492886:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:493315-493373:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:493772-493886:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:494127-494164:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:494684-494781:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:494972-495027:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:496079-496355:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:496470-496582:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:497054-497110:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:497326-497391:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:497722-497796:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:497876-498179:1:exon

position:497876:1
position: 497876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109798865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798865
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109798865 isoform X1
translation: MKKEKEKIVNVTSPVSGEDSDDKQSSSFPSVRFSSRNGSSKYDFVKVKVWLGDNADHYYVLSRFLLSRMLTVTKIPNHVAIKIALELKKLLIDNSLLDVSQSDLEANLFKLMERRGYGEEYINRYKMMTRFHHQRVPLVILVCGTACVGKSTIATLLAQRLNLPNVLQTDMVYELLRTSTDAPLASTPVWARDFSSSEELITEFCRECRVVRKGLAGDLKKAMKDGKPIIIEGIHLDPSIYLVDDENKSPSGVHSENKVINPASVTVDDSATIQEKNIHEGSSDENNGGSKILSSNEGVSTDQVDSVSNSMASMGLIESISEHKGASLRELETDKPAISKAKSGPKPIIVPIVLKMAEFDHKALLEEWITSRTFNDKCPDLDNEKLVANLKTIQDYLCSFTSQGLTVVNVSATTFPQTLDWLHGYLLQCIEQGIKENVTQVVAA
SIO_010081: LOC109798865
subclass of: SO_0000673
so part of: LOC109798865
location: join(492289..492426,492494..492577,492693..492766,492853..492886,493315..493373,493772..493886,494127..494164,494684..494781,494972..495027,496079..496355,496470..496582,497054..497110,497326..497391,497722..497796,498254..498304)
location: region:492289-498304:1
so has part: feature:492289-492426:1:exon
so has part: feature:492494-492577:1:exon
so has part: feature:492693-492766:1:exon
so has part: feature:492853-492886:1:exon
so has part: feature:493315-493373:1:exon
so has part: feature:493772-493886:1:exon
so has part: feature:494127-494164:1:exon
so has part: feature:494684-494781:1:exon
so has part: feature:494972-495027:1:exon
so has part: feature:496079-496355:1:exon
so has part: feature:496470-496582:1:exon
so has part: feature:497054-497110:1:exon
so has part: feature:497326-497391:1:exon
so has part: feature:497722-497796:1:exon
so has part: feature:498254-498304:1:exon

XP_020214869.1
type: Protein
SIO_000068: ncbiprotein

position:492289:1
position: 492289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498304:1
position: 498304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492289-492426:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:492494-492577:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:492693-492766:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:492853-492886:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:493315-493373:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:493772-493886:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:494127-494164:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:494684-494781:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:494972-495027:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:496079-496355:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:496470-496582:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:497054-497110:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:497326-497391:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:497722-497796:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:498254-498304:1:exon

LOC109798865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798865
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109798865 isoform X2
translation: MKKEKEKIVNVTSPVSGEDSDDKQSSSFPSVRFSSRNGSSKYDFVKVKVWLGDNADHYYVLSRFLLSRMLTVTKIPNHVAIKIALELKKLLIDNSLLDVSQSDLEANLFKLMERRGYGEEYINRYKMMTRFHHQRVPLVILVCGTACVGKSTIATLLAQRLNLPNVLQTDMVYELLRTSTDAPLASTPVWARDFSSSEELITEFCRECRVVRKGLAGDLKKAMKDGKPIIIEGIHLDPSIYLVDDENKSPSGVHSENKVINPASVTVDDSATIQEKNIHEGSSDENNGGSKILSSNEGVSTDQVDSVSNSMASMGLIESISEHKGASLRELETDKPAISKAKSGPKPIIVPIVLKMAEFDHKALLEEWITSRTFNDKCPDLDNEKLVANLKTIQDYLCSFTSQGLTVVNVSATTFPQTLDWLHGYLLQD
SIO_010081: LOC109798865
subclass of: SO_0000673
so part of: LOC109798865
location: join(492289..492426,492494..492577,492693..492766,492853..492886,493315..493373,493772..493886,494127..494164,494684..494781,494972..495027,496079..496355,496470..496582,497054..497110,497326..497391,497722..497796,497876..497881)
location: region:492289-497881:1
so has part: feature:492289-492426:1:exon
so has part: feature:492494-492577:1:exon
so has part: feature:492693-492766:1:exon
so has part: feature:492853-492886:1:exon
so has part: feature:493315-493373:1:exon
so has part: feature:493772-493886:1:exon
so has part: feature:494127-494164:1:exon
so has part: feature:494684-494781:1:exon
so has part: feature:494972-495027:1:exon
so has part: feature:496079-496355:1:exon
so has part: feature:496470-496582:1:exon
so has part: feature:497054-497110:1:exon
so has part: feature:497326-497391:1:exon
so has part: feature:497722-497796:1:exon
so has part: feature:497876-497881:1:exon

XP_029127081.1
type: Protein
SIO_000068: ncbiprotein

position:497881:1
position: 497881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492289-492426:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:492494-492577:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:492693-492766:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:492853-492886:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:493315-493373:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:493772-493886:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:494127-494164:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:494684-494781:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:494972-495027:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:496079-496355:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:496470-496582:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:497054-497110:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:497326-497391:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:497722-497796:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:497876-497881:1:exon

LOC109798377
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798377
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(500198..502226)
location: region:500198-502226:-1
so has part: feature:500198-502226:-1:exon
subclass of: SO_0000010

109798377
type: Gene
SIO_000068: ncbigene

position:500198:-1
position: 500198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502226:-1
position: 502226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500198-502226:-1:exon

LOC109798377
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798377
product: probable NAD(P)H-dependent oxidoreductase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_020358617.2
SIO_010081: LOC109798377
subclass of: SO_0000673
so part of: LOC109798377
location: complement(join(500198..500523,500646..500825,501002..501245,501629..501804,502107..502226))
location: region:500198-502226:-1
so has part: feature:502107-502226:-1:exon
so has part: feature:501629-501804:-1:exon
so has part: feature:501002-501245:-1:exon
so has part: feature:500646-500825:-1:exon
so has part: feature:500198-500523:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:502107-502226:-1:exon

position:502107:-1
position: 502107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:501629-501804:-1:exon

position:501629:-1
position: 501629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501804:-1
position: 501804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:501002-501245:-1:exon

position:501002:-1
position: 501002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501245:-1
position: 501245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:500646-500825:-1:exon

position:500646:-1
position: 500646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500825:-1
position: 500825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:500198-500523:-1:exon

position:500523:-1
position: 500523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109798377
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798377
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable NAD(P)H-dependent oxidoreductase 1
translation: MRSNHVRLNCGITLPRIGFGTYSFPNDRKTTELAVHKALEMGYRHFDSAKIYGSEPAVGKAINEAICVGEIEREDIFLTSKLWGSDHHDPVSALKQTLENMGMEYLDMYLVHWPVSLKPWVDYPVPNEDDFEKLDLETTWAGMEKCLEMGLCRCIGVSNFSSNKIECLLDYASTPPAVNQVEMHPMWRQGRLRKTCGDHKIHVSAYSPLGGPGNAWGSTAVVNHPIIRSIAFKHKATPAQVALKWGLSKGSSMIVKSFNHGRMKENIGAFDLRLDNEDMLEIEKLEEVKIMRGEFHVNDTTSPYKTIEELWDGEI
SIO_010081: LOC109798377
subclass of: SO_0000673
so part of: LOC109798377
location: complement(join(500296..500523,500646..500825,501002..501245,501629..501804,502107..502226))
location: region:500296-502226:-1
so has part: feature:502107-502226:-1:exon
so has part: feature:501629-501804:-1:exon
so has part: feature:501002-501245:-1:exon
so has part: feature:500646-500825:-1:exon
so has part: feature:500296-500523:-1:exon

XP_020214206.1
type: Protein
SIO_000068: ncbiprotein

position:500296:-1
position: 500296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:502107-502226:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:501629-501804:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:501002-501245:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:500646-500825:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:500296-500523:-1:exon

LOC114915898
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC114915898
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(515135..515692)
location: region:515135-515692:-1
so has part: feature:515135-515692:-1:exon
subclass of: SO_0000011

114915898
type: Gene
SIO_000068: ncbigene

position:515135:-1
position: 515135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:515692:-1
position: 515692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:515135-515692:-1:exon

LOC114915898
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3821
nc RNA class: lncRNA
gene: LOC114915898
product: uncharacterized LOC114915898
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_003804088.1
SIO_010081: LOC114915898
subclass of: SO_0000673
so part of: LOC114915898
location: complement(join(515135..515381,515471..515692))
location: region:515135-515692:-1
so has part: feature:515471-515692:-1:exon
so has part: feature:515135-515381:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:515471-515692:-1:exon

position:515471:-1
position: 515471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:515135-515381:-1:exon

position:515381:-1
position: 515381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109798265
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798265
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(519630..523006)
location: region:519630-523006:-1
so has part: feature:519630-523006:-1:exon
subclass of: SO_0000010

109798265
type: Gene
SIO_000068: ncbigene

position:519630:-1
position: 519630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:523006:-1
position: 523006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:519630-523006:-1:exon

LOC109798265
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798265
product: MDIS1-interacting receptor like kinase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_020358471.2
SIO_010081: LOC109798265
subclass of: SO_0000673
so part of: LOC109798265
location: complement(join(519630..520184,520328..523006))
location: region:519630-523006:-1
so has part: feature:520328-523006:-1:exon
so has part: feature:519630-520184:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:520328-523006:-1:exon

position:520328:-1
position: 520328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:519630-520184:-1:exon

position:520184:-1
position: 520184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109798265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798265
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MDIS1-interacting receptor like kinase 2
translation: MSNSNHACHAWLAIPATLLVLLALCEGTSGLTQAEALLRWKQSLPNQPILDSWVMNSTTSPCSWRGITCDTQGTVTIINLARAKLAGTLRNFNLSLFPNLLHLDLSDNSFTGPIPQNIGLLSMLQFLDFSGNNLNGTLPLSIANLTQVYELDVSRNHITGILDPRLFPDGSDEPKSGLIGIGNLLFQDTSLSGTIPNEIGNIRNLTLLALDGSHFYGPIPSSLGNCTHLSTLRMSQNNLTGPIPPSIGKLTNLTEVFLHQNHLNGTVPQEFGNLSSLVVLHLAENNFVGELPPQVCKSGTLVNFSAAYNSFTGPIPISLRNCPALYRVRIEYNRLTGYADQDFGVYPNLTYMDFSYNRVQGRISENWGSCKNLQSLNMAGNAISGNIPGELFQLDQLQELDLSSNQISGEIPPQIGNSSKLYKLNLSDNKFSGLLPAKIGRLSNLQSLDLSRNMLLGPIPNEIGDISNLQNLNLSNNYFSGTIPYQVGNLAALQQFLDLSYNSLSGDIPSNLGKLSNLISLNISHNNLSGSIPDPLSDLLSLLEINLSYNYLEGPVPKGGIFNSSQFLDLSKNKNLCGNIRGLNPCNVPHTKPDGGSRNKNMLVIPIVASLGGVLFLYLVLVGIIFFCYKRKSRAPRQRNSFRSNPFSIWHFNGKVVYRDIIEATRNFDDQYCIGEGALGKVYKAEMQGGEVYAVKKLKCDSDNIDIESIKCFQNEVEAMTETRHRNIVKLYGFCCEGMHTFLIYEYMDRGNLADMLRNDKEALELDWHKRVDIIKCVASALSYMHHDCAPPLIHRDISSNNILLSSNLEAHVSDFGTARFLKPDSSIWTSFAGTYGYAAPELAYTMAVTEKCDVFSFGVLVLEILTGKHPGDLVSSMQTSGEQKVNLKDILDPRLSPPSKRHILNELDFIVNLALSCLKTNPQSRPTMRSIAQLLQMDTA
SIO_010081: LOC109798265
subclass of: SO_0000673
so part of: LOC109798265
location: complement(join(519883..520184,520328..522851))
location: region:519883-522851:-1
so has part: feature:520328-522851:-1:exon
so has part: feature:519883-520184:-1:exon

XP_020214060.1
type: Protein
SIO_000068: ncbiprotein

position:519883:-1
position: 519883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522851:-1
position: 522851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:520328-522851:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:519883-520184:-1:exon

LOC109798514
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798514
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(524988..528399)
location: region:524988-528399:-1
so has part: feature:524988-528399:-1:exon
subclass of: SO_0000010

109798514
type: Gene
SIO_000068: ncbigene

position:524988:-1
position: 524988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528399:-1
position: 528399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:524988-528399:-1:exon

LOC109798514
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798514
product: MDIS1-interacting receptor like kinase 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_020358832.2
SIO_010081: LOC109798514
subclass of: SO_0000673
so part of: LOC109798514
location: complement(join(524988..525395,525730..528399))
location: region:524988-528399:-1
so has part: feature:525730-528399:-1:exon
so has part: feature:524988-525395:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:525730-528399:-1:exon

position:525730:-1
position: 525730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:524988-525395:-1:exon

position:525395:-1
position: 525395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109798514
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798514
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MDIS1-interacting receptor like kinase 2-like
translation: MTMSNHTCYHACLAIQTTFLILLALCQATSGQTQAEALLKWKQSLPNQPILDSWVMNSTTSPCSWRGITCDSQGTVTIINLAYTGLTGTLQNLNFSFFPNLLRLDLKENNLTGPIPQNIGVLSNLQFLDLSSNYLNGSLPLSIANLTQVHELDVSRNDITGILDPRLFPDGSDSPKSGLIGIRNLLFQDTLLGGTIPNEIGNIRNLTLLALDGNNFYGPIPPSLGNCTHLSILRMPENQLTGPIPPSIGKLTNLTDVRFQINNLNGTVPREFGNLSSLIVLHLAENNFVGELPPQVCKSGTLVNFSAAYNSFTGPLPMSLRNCPALYRVRLEYNRLSGYADQDFGVYPNLTYLDFSYNRVEGDISPNWGACKNLQSLNMAGNAISSNIPGELFQLDQLQELDLSSNQISGEIPPQIGNSSNLYELNLSDNKLSGMVPPDIGKLSNLRSLDLSMNMLLGPIPNQLGDISNLRNLNLSNNDFNGTIPYQVGNLAQLQDFLDLSYNSLSGEIPSDVGRLSNLISLNISHNNLSGSIPDTISKMLSLSAINLSYNNLEGPVPEGGIFNSSHPLDLSNNKGLCGNIQGLQPCNVSLTKPDGRSSNKKKVVIPIVASLGGALFVSLVCIGSVFFCYKRNSRTRRQKSSIKIPNPFSIWYFNGRVVYGDIIEATKNFDNQYCIGEGALGKVYKAEMKGRQVFAVKKLKCDADNLDVESIKNFQNEVEAMTETRHRNIVKLYGFCCEGMHTFLIYEYMDRGNLSEMLRNDTDALELDWPKRVDIIKDVASALSYMHHDCAPPLIHRDISSKNILLSSNLEAHVSDFGTARFLKPDSPIWTSFAGTFGYAAPELAYTMAVTEKCDVFSFGVLAFEVLTGKHPGDLVSYIQTSSEQKINFKEILDPRLLPPPKSHILKELALIADLALSCLQTNPQSRPTMRSIAQLLEMETAEQT
SIO_010081: LOC109798514
subclass of: SO_0000673
so part of: LOC109798514
location: complement(join(525085..525395,525730..528259))
location: region:525085-528259:-1
so has part: feature:525730-528259:-1:exon
so has part: feature:525085-525395:-1:exon

XP_020214421.1
type: Protein
SIO_000068: ncbiprotein

position:525085:-1
position: 525085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528259:-1
position: 528259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:525730-528259:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:525085-525395:-1:exon

LOC109798774
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798774
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 541368..546947
location: region:541368-546947:1
so has part: feature:541368-546947:1:exon
subclass of: SO_0000010

109798774
type: Gene
SIO_000068: ncbigene

position:541368:1
position: 541368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546947:1
position: 546947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541368-546947:1:exon

LOC109798774
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798774
product: purple acid phosphatase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_020359167.2
SIO_010081: LOC109798774
subclass of: SO_0000673
so part of: LOC109798774
location: join(541368..541553,541733..541969,542381..542581,542712..542823,543377..543606,543771..543909,544766..544986,545242..545363,546485..546947)
location: region:541368-546947:1
so has part: feature:541368-541553:1:exon
so has part: feature:541733-541969:1:exon
so has part: feature:542381-542581:1:exon
so has part: feature:542712-542823:1:exon
so has part: feature:543377-543606:1:exon
so has part: feature:543771-543909:1:exon
so has part: feature:544766-544986:1:exon
so has part: feature:545242-545363:1:exon
so has part: feature:546485-546947:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:541368-541553:1:exon

position:541553:1
position: 541553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:541733-541969:1:exon

position:541733:1
position: 541733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541969:1
position: 541969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:542381-542581:1:exon

position:542381:1
position: 542381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542581:1
position: 542581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:542712-542823:1:exon

position:542712:1
position: 542712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542823:1
position: 542823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:543377-543606:1:exon

position:543377:1
position: 543377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:543606:1
position: 543606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:543771-543909:1:exon

position:543771:1
position: 543771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:543909:1
position: 543909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:544766-544986:1:exon

position:544766:1
position: 544766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544986:1
position: 544986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:545242-545363:1:exon

position:545242:1
position: 545242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:545363:1
position: 545363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:546485-546947:1:exon

position:546485:1
position: 546485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109798774
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798774
product: purple acid phosphatase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_020359168.2
SIO_010081: LOC109798774
subclass of: SO_0000673
so part of: LOC109798774
location: join(541394..541654,541733..541969,542381..542581,542712..542823,543377..543606,543771..543909,544766..544986,545242..545363,546485..546947)
location: region:541394-546947:1
so has part: feature:541394-541654:1:exon
so has part: feature:541733-541969:1:exon
so has part: feature:542381-542581:1:exon
so has part: feature:542712-542823:1:exon
so has part: feature:543377-543606:1:exon
so has part: feature:543771-543909:1:exon
so has part: feature:544766-544986:1:exon
so has part: feature:545242-545363:1:exon
so has part: feature:546485-546947:1:exon

position:541394:1
position: 541394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541394-541654:1:exon

position:541654:1
position: 541654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:541733-541969:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:542381-542581:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:542712-542823:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:543377-543606:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:543771-543909:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:544766-544986:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:545242-545363:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:546485-546947:1:exon

LOC109798774
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798774
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: purple acid phosphatase
translation: MGTVEGLLAFALVLNVCVVCNGGTSSSFVRKVEKTVDMPLDSDVFTVPPGYNAPQQVHITQGDLVGRAVIVSWVTVDEPGSSEVRYWRENSHRKKIAEGKVVTYRYFNYSSGFIHHTTISHLEYNSKYYYEVGLTNTTRQFWFMTPPEIGPDVPYTFGLIGDLGQSFDSNKTLSHYELNPRKGQTILFVGDLSYADNYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIDFAPEIGETVPFKPYTHRYRVPYRASQSTSPFWYSIKRASAHIIVLASYSAYGKYTPQYKWLEEELPKVNRTETPWLIVLMHSPWYNSYNYHYMEGETMRVMYEPWFVKYKVDVVFAGHVHAYERSERVSNVAYNVVNGLCSPIKDQSAPVYITIGDGGNLEGLATNMTEPQPEYSAFREASFGHAIFEIKNRTHAYYGWHRNQDGVAVEADSLWFYNRFWHPVDDSTVHVSH
SIO_010081: LOC109798774
subclass of: SO_0000673
so part of: LOC109798774
location: join(541802..541969,542381..542581,542712..542823,543377..543606,543771..543909,544766..544986,545242..545363,546485..546686)
location: region:541802-546686:1
so has part: feature:541802-541969:1:exon
so has part: feature:542381-542581:1:exon
so has part: feature:542712-542823:1:exon
so has part: feature:543377-543606:1:exon
so has part: feature:543771-543909:1:exon
so has part: feature:544766-544986:1:exon
so has part: feature:545242-545363:1:exon
so has part: feature:546485-546686:1:exon

XP_020214756.1
type: Protein
SIO_000068: ncbiprotein

position:541802:1
position: 541802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546686:1
position: 546686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541802-541969:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:542381-542581:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:542712-542823:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:543377-543606:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:543771-543909:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:544766-544986:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:545242-545363:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:546485-546686:1:exon

LOC109798774
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798774
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: purple acid phosphatase
translation: MGTVEGLLAFALVLNVCVVCNGGTSSSFVRKVEKTVDMPLDSDVFTVPPGYNAPQQVHITQGDLVGRAVIVSWVTVDEPGSSEVRYWRENSHRKKIAEGKVVTYRYFNYSSGFIHHTTISHLEYNSKYYYEVGLTNTTRQFWFMTPPEIGPDVPYTFGLIGDLGQSFDSNKTLSHYELNPRKGQTILFVGDLSYADNYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIDFAPEIGETVPFKPYTHRYRVPYRASQSTSPFWYSIKRASAHIIVLASYSAYGKYTPQYKWLEEELPKVNRTETPWLIVLMHSPWYNSYNYHYMEGETMRVMYEPWFVKYKVDVVFAGHVHAYERSERVSNVAYNVVNGLCSPIKDQSAPVYITIGDGGNLEGLATNMTEPQPEYSAFREASFGHAIFEIKNRTHAYYGWHRNQDGVAVEADSLWFYNRFWHPVDDSTVHVSH
SIO_010081: LOC109798774
subclass of: SO_0000673
so part of: LOC109798774
location: join(541802..541969,542381..542581,542712..542823,543377..543606,543771..543909,544766..544986,545242..545363,546485..546686)
location: region:541802-546686:1
so has part: feature:541802-541969:1:exon
so has part: feature:542381-542581:1:exon
so has part: feature:542712-542823:1:exon
so has part: feature:543377-543606:1:exon
so has part: feature:543771-543909:1:exon
so has part: feature:544766-544986:1:exon
so has part: feature:545242-545363:1:exon
so has part: feature:546485-546686:1:exon

XP_020214757.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:541802-541969:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:542381-542581:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:542712-542823:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:543377-543606:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:543771-543909:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:544766-544986:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:545242-545363:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:546485-546686:1:exon

LOC109798775
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798775
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 554546..556846
location: region:554546-556846:1
so has part: feature:554546-556846:1:exon
subclass of: SO_0000010

109798775
type: Gene
SIO_000068: ncbigene

position:554546:1
position: 554546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556846:1
position: 556846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:554546-556846:1:exon

LOC109798775
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798775
product: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_020359170.2
SIO_010081: LOC109798775
subclass of: SO_0000673
so part of: LOC109798775
location: join(554546..554864,554990..555087,555311..555341,555433..555532,555639..555709,556113..556256,556417..556846)
location: region:554546-556846:1
so has part: feature:554546-554864:1:exon
so has part: feature:554990-555087:1:exon
so has part: feature:555311-555341:1:exon
so has part: feature:555433-555532:1:exon
so has part: feature:555639-555709:1:exon
so has part: feature:556113-556256:1:exon
so has part: feature:556417-556846:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:554546-554864:1:exon

position:554864:1
position: 554864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:554990-555087:1:exon

position:554990:1
position: 554990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555087:1
position: 555087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:555311-555341:1:exon

position:555311:1
position: 555311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555341:1
position: 555341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:555433-555532:1:exon

position:555433:1
position: 555433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555532:1
position: 555532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:555639-555709:1:exon

position:555639:1
position: 555639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555709:1
position: 555709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:556113-556256:1:exon

position:556113:1
position: 556113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556256:1
position: 556256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:556417-556846:1:exon

position:556417:1
position: 556417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109798775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798775
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1
translation: MEVNHYIGRMEGEAKVSSENNQKGRFQRICVFCGSRVGYKSSFSDAALELGKLLVERKIDLVYGGGRLGLMGLISQTVLKGGCHVLGVIPQALLPREISGETFGEVKTVADMHERKSVMAKHADAFIALPGGYGTMEELMEVVAWSQLGIHDKPVGLLNVDGYFNCLLTLFDKGVEEGFIDISARHIVVIADTAAELIRKMEEYVPNHQKVAPRQSWATDQLLLESAETRETLRS
SIO_010081: LOC109798775
subclass of: SO_0000673
so part of: LOC109798775
location: join(554703..554864,554990..555087,555311..555341,555433..555532,555639..555709,556113..556256,556417..556518)
location: region:554703-556518:1
so has part: feature:554703-554864:1:exon
so has part: feature:554990-555087:1:exon
so has part: feature:555311-555341:1:exon
so has part: feature:555433-555532:1:exon
so has part: feature:555639-555709:1:exon
so has part: feature:556113-556256:1:exon
so has part: feature:556417-556518:1:exon

XP_020214759.2
type: Protein
SIO_000068: ncbiprotein

position:554703:1
position: 554703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556518:1
position: 556518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:554703-554864:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:554990-555087:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:555311-555341:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:555433-555532:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:555639-555709:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:556113-556256:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:556417-556518:1:exon

LOC109798808
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798808
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(559048..565973)
location: region:559048-565973:-1
so has part: feature:559048-565973:-1:exon
subclass of: SO_0000010

109798808
type: Gene
SIO_000068: ncbigene

position:559048:-1
position: 559048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:565973:-1
position: 565973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:559048-565973:-1:exon

LOC109798808
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798808
product: actin-related protein 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XM_020359205.2
SIO_010081: LOC109798808
subclass of: SO_0000673
so part of: LOC109798808
location: complement(join(559048..559593,559776..559843,562305..562488,563173..563417,564422..564563,564821..565036,565721..565973))
location: region:559048-565973:-1
so has part: feature:565721-565973:-1:exon
so has part: feature:564821-565036:-1:exon
so has part: feature:564422-564563:-1:exon
so has part: feature:563173-563417:-1:exon
so has part: feature:562305-562488:-1:exon
so has part: feature:559776-559843:-1:exon
so has part: feature:559048-559593:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:565721-565973:-1:exon

position:565721:-1
position: 565721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:564821-565036:-1:exon

position:564821:-1
position: 564821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:565036:-1
position: 565036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:564422-564563:-1:exon

position:564422:-1
position: 564422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564563:-1
position: 564563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:563173-563417:-1:exon

position:563173:-1
position: 563173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:563417:-1
position: 563417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:562305-562488:-1:exon

position:562305:-1
position: 562305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:562488:-1
position: 562488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:559776-559843:-1:exon

position:559776:-1
position: 559776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559843:-1
position: 559843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:559048-559593:-1:exon

position:559593:-1
position: 559593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109798808
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798808
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin-related protein 7
translation: MEAAVVDVGSKLLKAGFAIPDQTPAMIIPTQMKQMLDDGSVTDNSPADNVTVDPVVRGFIRDWDAIEDLLHHVLYSGLGWEIGNEGQILFTDPLCTPKANKEQLVQLMFETFNISGFYASEQAVLSLYAVGRISGCSVDIGHGKIDIAPVIEGAVHHIASRRFEFGGTDLTNFLAQELGKSNPHVNISLSDVEKIKEQYSCCAEDEVAYQKIQYSCPVEKHTLPDGQVITIGRERYTVGEALFQPCLLGLEAHGIVDQLVRAISTVSSDNQRQLLENTVVCGGTSSMIGFEERFQKESSLSSSAVQPTLVKPPEYMPENLTMYSAWVGGAILAKVVFPQNQHITKGDYDETGPSIVHRKCF
SIO_010081: LOC109798808
subclass of: SO_0000673
so part of: LOC109798808
location: complement(join(559441..559593,559776..559843,562305..562488,563173..563417,564422..564563,564821..565036,565721..565798))
location: region:559441-565798:-1
so has part: feature:565721-565798:-1:exon
so has part: feature:564821-565036:-1:exon
so has part: feature:564422-564563:-1:exon
so has part: feature:563173-563417:-1:exon
so has part: feature:562305-562488:-1:exon
so has part: feature:559776-559843:-1:exon
so has part: feature:559441-559593:-1:exon

XP_020214794.1
type: Protein
SIO_000068: ncbiprotein

position:559441:-1
position: 559441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:565798:-1
position: 565798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565721-565798:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:564821-565036:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:564422-564563:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:563173-563417:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:562305-562488:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:559776-559843:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:559441-559593:-1:exon

LOC109798690
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798690
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(567140..571442)
location: region:567140-571442:-1
so has part: feature:567140-571442:-1:exon
subclass of: SO_0000010

109798690
type: Gene
SIO_000068: ncbigene

position:567140:-1
position: 567140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:571442:-1
position: 571442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:567140-571442:-1:exon

LOC109798690
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798690
product: uncharacterized LOC109798690, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_020359045.2
SIO_010081: LOC109798690
subclass of: SO_0000673
so part of: LOC109798690
location: complement(join(567140..569674,570823..570968,571153..571442))
location: region:567140-571442:-1
so has part: feature:571153-571442:-1:exon
so has part: feature:570823-570968:-1:exon
so has part: feature:567140-569674:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:571153-571442:-1:exon

position:571153:-1
position: 571153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:570823-570968:-1:exon

position:570823:-1
position: 570823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:570968:-1
position: 570968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:567140-569674:-1:exon

position:569674:-1
position: 569674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109798690
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798690
product: uncharacterized LOC109798690, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_020359044.2
SIO_010081: LOC109798690
subclass of: SO_0000673
so part of: LOC109798690
location: complement(join(567140..569674,570823..571082,571153..571441))
location: region:567140-571441:-1
so has part: feature:571153-571441:-1:exon
so has part: feature:570823-571082:-1:exon
so has part: feature:567140-569674:-1:exon

position:571441:-1
position: 571441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:571153-571441:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:570823-571082:-1:exon

position:571082:-1
position: 571082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:567140-569674:-1:exon

LOC109798690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798690
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109798690 isoform X2
translation: MEGDWSSQSNWTIASGSVRDCITFHSSLSFSDHHATQSTPTPLLLHPPSPHHSPPCQIKIRCGVAVRDDVVLSSPSVPHLTDDSVKMEDDWVEVKVPDVAKHSAKTSQDLYEATAEIDDANPCISVTLRLLSLQNKGCVYVDEIYVFADPVDSADTESQESHNENTSGSSLMAMFLPTLMQLSKTKGLSNLNALRKENQHVLGNDLEATHPSDSVIKTQLKGEATITDPQEVKLNEVQGGWMGPHPLDTFSQLAKMEGNHTSVPSQTTKINNTHSFIPSKIAEKENDHSAIPFQSAKTECNINSVPMQVAISESNPGDSLGGNVERVLEQLVSRMDRIEEICLGFQEKMVLPMNSIEARLQRVEQQLDTLTKKSQNSTLPSCSRIFAPDASCSDSDAISCDNCPDYAATKESESDEKHLHTEVRYVSAHISDSANTTQLLPGLVVTAPEFPDGEDEEVDASGLETDVDEKVDASGLEADKDEEVDASGLEADKDEEVDASGLEADEDEEVDASGPETDSSKNKAKQSIDDALSSALANFLSSTPLNSPKYTKSLTVKAPEFLNEDADDHESNSQIVKNDSVHLTDREEFGHIQVLASSNTSLENSEKINPDSNDKNSENTSQEAEEHDQFCSAEGDQDEATLKTTEHSPKADVVDNFEEDKNGKINGKKSDGLSSNTSDISNGLLDNLTPCGYNSINEEEPLSGTELTVASEVSRKTHENIIENVLGFSLASSIVDFENPILDVKFISQRTPATESFLEDFLVETQEAKESNGDFPVLKSNGDLSVEEQSNLISIEDGELVNPTSDSHFAVDKDLCTSIAAEPVNIEGDNLPVLEDHKRKRDQMSSSLI
SIO_010081: LOC109798690
subclass of: SO_0000673
so part of: LOC109798690
location: complement(join(567449..569674,570823..570968,571153..571330))
location: region:567449-571330:-1
so has part: feature:571153-571330:-1:exon
so has part: feature:570823-570968:-1:exon
so has part: feature:567449-569674:-1:exon

XP_020214634.1
type: Protein
SIO_000068: ncbiprotein

position:567449:-1
position: 567449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:571330:-1
position: 571330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:571153-571330:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:570823-570968:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:567449-569674:-1:exon

LOC109798690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798690
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109798690 isoform X1
translation: MEGDWSSQSNWTIASGSVRDCITFHSSLSFSDHHATQSTPTPLLLHPPSPHHSPPCQIKITFPEKHELRQIYVRSTARVYEIYYAPDSRSNDDYLCTVRCGVAVRDDVVLSSPSVPHLTDDSVKMEDDWVEVKVPDVAKHSAKTSQDLYEATAEIDDANPCISVTLRLLSLQNKGCVYVDEIYVFADPVDSADTESQESHNENTSGSSLMAMFLPTLMQLSKTKGLSNLNALRKENQHVLGNDLEATHPSDSVIKTQLKGEATITDPQEVKLNEVQGGWMGPHPLDTFSQLAKMEGNHTSVPSQTTKINNTHSFIPSKIAEKENDHSAIPFQSAKTECNINSVPMQVAISESNPGDSLGGNVERVLEQLVSRMDRIEEICLGFQEKMVLPMNSIEARLQRVEQQLDTLTKKSQNSTLPSCSRIFAPDASCSDSDAISCDNCPDYAATKESESDEKHLHTEVRYVSAHISDSANTTQLLPGLVVTAPEFPDGEDEEVDASGLETDVDEKVDASGLEADKDEEVDASGLEADKDEEVDASGLEADEDEEVDASGPETDSSKNKAKQSIDDALSSALANFLSSTPLNSPKYTKSLTVKAPEFLNEDADDHESNSQIVKNDSVHLTDREEFGHIQVLASSNTSLENSEKINPDSNDKNSENTSQEAEEHDQFCSAEGDQDEATLKTTEHSPKADVVDNFEEDKNGKINGKKSDGLSSNTSDISNGLLDNLTPCGYNSINEEEPLSGTELTVASEVSRKTHENIIENVLGFSLASSIVDFENPILDVKFISQRTPATESFLEDFLVETQEAKESNGDFPVLKSNGDLSVEEQSNLISIEDGELVNPTSDSHFAVDKDLCTSIAAEPVNIEGDNLPVLEDHKRKRDQMSSSLI
SIO_010081: LOC109798690
subclass of: SO_0000673
so part of: LOC109798690
location: complement(join(567449..569674,570823..571082,571153..571330))
location: region:567449-571330:-1
so has part: feature:571153-571330:-1:exon
so has part: feature:570823-571082:-1:exon
so has part: feature:567449-569674:-1:exon

XP_020214633.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:571153-571330:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:570823-571082:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:567449-569674:-1:exon

LOC109798515
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798515
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(582062..583121)
location: region:582062-583121:-1
so has part: feature:582062-583121:-1:exon
subclass of: SO_0000010

109798515
type: Gene
SIO_000068: ncbigene

position:582062:-1
position: 582062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:583121:-1
position: 583121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:582062-583121:-1:exon

LOC109798515
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798515
product: zinc finger protein ZAT9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_020358833.1
SIO_010081: LOC109798515
subclass of: SO_0000673
so part of: LOC109798515
location: complement(join(582062..582533,582562..583121))
location: region:582062-583121:-1
so has part: feature:582562-583121:-1:exon
so has part: feature:582062-582533:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:582562-583121:-1:exon

position:582562:-1
position: 582562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:582062-582533:-1:exon

position:582533:-1
position: 582533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109798515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798515
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein ZAT9
translation: MEKNNSKVCKICDKCFSNGKAMGGHMRSHFAKLPIPPKPETKNQALDNSAELTYRPNQSASSQTSQSQKKPAQNFRSLKRSLFSFSTNTNRENEFRPYPKNPTRKRSKCHRKFIAAIEMKADSEQVTPKPDSLFAEEAARSLLMLSKDKWPESKEIKNQEVKEIRAKDKEDGRDDLLAQIPSQANFNLIRVLVGKKQTIRKKWPESKEIKNQEVKEIRAKDKEDGRDDLLAQIPSQANFKCDKCGKIFQSHQALGGHKANHKKNENTWQGGDPDNDGTSKKSDDVGEKVFECPYCSKVFKSARALGGHKKVHFSYNKANAQSSANQFGRKLVVDLNFPAPIED
SIO_010081: LOC109798515
subclass of: SO_0000673
so part of: LOC109798515
location: complement(join(582062..582533,582562..583121))
location: region:582062-583121:-1
so has part: feature:582562-583121:-1:exon
so has part: feature:582062-582533:-1:exon

XP_020214422.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:582562-583121:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:582062-582533:-1:exon

LOC109798900
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798900
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(583875..584373)
location: region:583875-584373:-1
so has part: feature:583875-584373:-1:exon
subclass of: SO_0000010

109798900
type: Gene
SIO_000068: ncbigene

position:583875:-1
position: 583875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:584373:-1
position: 584373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:583875-584373:-1:exon

LOC109798900
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798900
product: photosystem II 5 kDa protein, chloroplastic
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020359332.2
SIO_010081: LOC109798900
subclass of: SO_0000673
so part of: LOC109798900
location: complement(583875..584373)
location: region:583875-584373:-1
so has part: feature:583875-584373:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:583875-584373:-1:exon

LOC109798900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798900
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: photosystem II 5 kDa protein, chloroplastic
translation: MASITMTASFLGTSTIGHRSPVASQRRLVVANSAKSVEGEKVKMSYENEKEGSNGRRNMMFAAAAAAVCSVAGMAVADEPKRGTPEARKLYSPVCVTMPTARICHK
SIO_010081: LOC109798900
subclass of: SO_0000673
so part of: LOC109798900
location: complement(583998..584318)
location: region:583998-584318:-1
so has part: feature:583998-584318:-1:exon

XP_020214921.1
type: Protein
SIO_000068: ncbiprotein

position:583998:-1
position: 583998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:584318:-1
position: 584318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:583998-584318:-1:exon

LOC109798264
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798264
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(584741..590582)
location: region:584741-590582:-1
so has part: feature:584741-590582:-1:exon
subclass of: SO_0000010

109798264
type: Gene
SIO_000068: ncbigene

position:584741:-1
position: 584741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590582:-1
position: 590582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:584741-590582:-1:exon

LOC109798264
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798264
product: tRNA-dihydrouridine(20/20a) synthase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_020358470.2
SIO_010081: LOC109798264
subclass of: SO_0000673
so part of: LOC109798264
location: complement(join(584741..585232,585910..585990,586375..586455,586569..586641,586831..586892,587061..587142,587795..587912,588756..588858,588980..589049,589146..589273,589590..589716,589843..590092,590385..590582))
location: region:584741-590582:-1
so has part: feature:590385-590582:-1:exon
so has part: feature:589843-590092:-1:exon
so has part: feature:589590-589716:-1:exon
so has part: feature:589146-589273:-1:exon
so has part: feature:588980-589049:-1:exon
so has part: feature:588756-588858:-1:exon
so has part: feature:587795-587912:-1:exon
so has part: feature:587061-587142:-1:exon
so has part: feature:586831-586892:-1:exon
so has part: feature:586569-586641:-1:exon
so has part: feature:586375-586455:-1:exon
so has part: feature:585910-585990:-1:exon
so has part: feature:584741-585232:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:590385-590582:-1:exon

position:590385:-1
position: 590385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:589843-590092:-1:exon

position:589843:-1
position: 589843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590092:-1
position: 590092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:589590-589716:-1:exon

position:589590:-1
position: 589590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589716:-1
position: 589716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:589146-589273:-1:exon

position:589146:-1
position: 589146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589273:-1
position: 589273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:588980-589049:-1:exon

position:588980:-1
position: 588980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589049:-1
position: 589049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:588756-588858:-1:exon

position:588756:-1
position: 588756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588858:-1
position: 588858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:587795-587912:-1:exon

position:587795:-1
position: 587795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:587912:-1
position: 587912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:587061-587142:-1:exon

position:587061:-1
position: 587061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:587142:-1
position: 587142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:586831-586892:-1:exon

position:586831:-1
position: 586831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586892:-1
position: 586892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:586569-586641:-1:exon

position:586569:-1
position: 586569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586641:-1
position: 586641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:586375-586455:-1:exon

position:586375:-1
position: 586375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586455:-1
position: 586455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:585910-585990:-1:exon

position:585910:-1
position: 585910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:585990:-1
position: 585990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:584741-585232:-1:exon

position:585232:-1
position: 585232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109798264
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798264
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109798264 isoform X1
translation: MTKLAGYSLAVSFAPISYNLVKNNCRFTIGISRRNKCSSRLFSIHAQKEQLHEKPGVVGRYYFPPWFSVAPMMDWTDHHYRTLARLISKHSWLYTEMLAAETIVHQKDNLDRFLAYSPDQHPIVLQIGGSNIESLAKATELANTYCYDEINLNCGCPSPKVAGHGCFGVSLMLNPKFVAEAMSAIAASTNVPVSVKCRIGVDDHDSYHELCDFIYQVSSLSPTKHFIIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVSAAREAGAHGVMVGRAAYNNPWHILGHVDATIYGTPRCGLTRRQVLEKYLAYGDSELGKYGHKPTVRDIVKPLLHLFHSEPGNGLWKRKADAAFRNCTTIESFFEETLVAIPDSVLDSPVAEPPPGRGDLFANIHNLLPPSYRKREEAVTICA
SIO_010081: LOC109798264
subclass of: SO_0000673
so part of: LOC109798264
location: complement(join(585065..585232,585910..585990,586375..586455,586569..586641,586831..586892,587061..587142,587795..587912,588756..588858,588980..589049,589146..589273,589590..589716,589843..590045))
location: region:585065-590045:-1
so has part: feature:589843-590045:-1:exon
so has part: feature:589590-589716:-1:exon
so has part: feature:589146-589273:-1:exon
so has part: feature:588980-589049:-1:exon
so has part: feature:588756-588858:-1:exon
so has part: feature:587795-587912:-1:exon
so has part: feature:587061-587142:-1:exon
so has part: feature:586831-586892:-1:exon
so has part: feature:586569-586641:-1:exon
so has part: feature:586375-586455:-1:exon
so has part: feature:585910-585990:-1:exon
so has part: feature:585065-585232:-1:exon

XP_020214059.1
type: Protein
SIO_000068: ncbiprotein

position:585065:-1
position: 585065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590045:-1
position: 590045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:589843-590045:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:589590-589716:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:589146-589273:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:588980-589049:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:588756-588858:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:587795-587912:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:587061-587142:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:586831-586892:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:586569-586641:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:586375-586455:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:585910-585990:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:585065-585232:-1:exon

LOC109798264
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798264
product: tRNA-dihydrouridine(20/20a) synthase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_029271249.1
SIO_010081: LOC109798264
subclass of: SO_0000673
so part of: LOC109798264
location: complement(join(585101..585232,585910..585990,586517..586641,586831..586892,587061..587142,587795..587912,588756..588858,588980..589049,589146..589273,589590..589716,589843..590092,590385..590582))
location: region:585101-590582:-1
so has part: feature:590385-590582:-1:exon
so has part: feature:589843-590092:-1:exon
so has part: feature:589590-589716:-1:exon
so has part: feature:589146-589273:-1:exon
so has part: feature:588980-589049:-1:exon
so has part: feature:588756-588858:-1:exon
so has part: feature:587795-587912:-1:exon
so has part: feature:587061-587142:-1:exon
so has part: feature:586831-586892:-1:exon
so has part: feature:586517-586641:-1:exon
so has part: feature:585910-585990:-1:exon
so has part: feature:585101-585232:-1:exon

position:585101:-1
position: 585101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:590385-590582:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:589843-590092:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:589590-589716:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:589146-589273:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:588980-589049:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:588756-588858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:587795-587912:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:587061-587142:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:586831-586892:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:586517-586641:-1:exon

position:586517:-1
position: 586517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:585910-585990:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:585101-585232:-1:exon

LOC109798264
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798264
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109798264 isoform X2
translation: MTKLAGYSLAVSFAPISYNLVKNNCRFTIGISRRNKCSSRLFSIHAQKEQLHEKPGVVGRYYFPPWFSVAPMMDWTDHHYRTLARLISKHSWLYTEMLAAETIVHQKDNLDRFLAYSPDQHPIVLQIGGSNIESLAKATELANTYCYDEINLNCGCPSPKVAGHGCFGVSLMLNPKFVAEAMSAIAASTNVPVSVKCRIGVDDHDSYHELCDFIYQVSSLSPTKHFIIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVSAAREAGAHGVMVGRAAYNNPWHILGHVDATIYGTPRCGLTRRQVHLHNIWLSMDSSAPILTFTPSFPFGTWEWTLEAQS
SIO_010081: LOC109798264
subclass of: SO_0000673
so part of: LOC109798264
location: complement(join(585932..585990,586517..586641,586831..586892,587061..587142,587795..587912,588756..588858,588980..589049,589146..589273,589590..589716,589843..590045))
location: region:585932-590045:-1
so has part: feature:589843-590045:-1:exon
so has part: feature:589590-589716:-1:exon
so has part: feature:589146-589273:-1:exon
so has part: feature:588980-589049:-1:exon
so has part: feature:588756-588858:-1:exon
so has part: feature:587795-587912:-1:exon
so has part: feature:587061-587142:-1:exon
so has part: feature:586831-586892:-1:exon
so has part: feature:586517-586641:-1:exon
so has part: feature:585932-585990:-1:exon

XP_029127082.1
type: Protein
SIO_000068: ncbiprotein

position:585932:-1
position: 585932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:589843-590045:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:589590-589716:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:589146-589273:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:588980-589049:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:588756-588858:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:587795-587912:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:587061-587142:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:586831-586892:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:586517-586641:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:585932-585990:-1:exon

LOC109798449
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798449
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 594674..606785
location: region:594674-606785:1
so has part: feature:594674-606785:1:exon
subclass of: SO_0000010

109798449
type: Gene
SIO_000068: ncbigene

position:594674:1
position: 594674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:606785:1
position: 606785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:594674-606785:1:exon

LOC109798449
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 3821
gene: LOC109798449
product: altered inheritance of mitochondria protein 3, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_003804111.1
SIO_010081: LOC109798449
so part of: LOC109798449
location: join(594674..594820,594985..595046,595772..596021,596121..596336,596413..599685,599929..600113,600229..600313,600454..600506,601159..601328,603609..606785)
location: region:594674-606785:1
so has part: feature:594674-594820:1:exon
so has part: feature:594985-595046:1:exon
so has part: feature:595772-596021:1:exon
so has part: feature:596121-596336:1:exon
so has part: feature:596413-599685:1:exon
so has part: feature:599929-600113:1:exon
so has part: feature:600229-600313:1:exon
so has part: feature:600454-600506:1:exon
so has part: feature:601159-601328:1:exon
so has part: feature:603609-606785:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:594674-594820:1:exon

position:594820:1
position: 594820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:594985-595046:1:exon

position:594985:1
position: 594985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:595046:1
position: 595046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:595772-596021:1:exon

position:595772:1
position: 595772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:596021:1
position: 596021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:596121-596336:1:exon

position:596121:1
position: 596121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:596336:1
position: 596336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:596413-599685:1:exon

position:596413:1
position: 596413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:599685:1
position: 599685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:599929-600113:1:exon

position:599929:1
position: 599929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:600113:1
position: 600113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:600229-600313:1:exon

position:600229:1
position: 600229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:600313:1
position: 600313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:600454-600506:1:exon

position:600454:1
position: 600454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:600506:1
position: 600506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:601159-601328:1:exon

position:601159:1
position: 601159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:601328:1
position: 601328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:603609-606785:1:exon

position:603609:1
position: 603609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109798449
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 3821
gene: LOC109798449
product: altered inheritance of mitochondria protein 3, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_003804110.1
SIO_010081: LOC109798449
so part of: LOC109798449
location: join(594674..594820,594985..595046,595772..596021,596121..596336,596413..599685,599929..600113,600229..600313,600454..600506,601170..601328,603609..606785)
location: region:594674-606785:1
so has part: feature:594674-594820:1:exon
so has part: feature:594985-595046:1:exon
so has part: feature:595772-596021:1:exon
so has part: feature:596121-596336:1:exon
so has part: feature:596413-599685:1:exon
so has part: feature:599929-600113:1:exon
so has part: feature:600229-600313:1:exon
so has part: feature:600454-600506:1:exon
so has part: feature:601170-601328:1:exon
so has part: feature:603609-606785:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:594674-594820:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:594985-595046:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:595772-596021:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:596121-596336:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:596413-599685:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:599929-600113:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:600229-600313:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:600454-600506:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:601170-601328:1:exon

position:601170:1
position: 601170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:603609-606785:1:exon

LOC109798449
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 3821
gene: LOC109798449
product: altered inheritance of mitochondria protein 3, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XR_003804112.1
SIO_010081: LOC109798449
so part of: LOC109798449
location: join(594674..594820,594985..595046,595772..596021,596121..596336,596413..599685,599929..600113,600229..600313,600454..600506,603609..606785)
location: region:594674-606785:1
so has part: feature:594674-594820:1:exon
so has part: feature:594985-595046:1:exon
so has part: feature:595772-596021:1:exon
so has part: feature:596121-596336:1:exon
so has part: feature:596413-599685:1:exon
so has part: feature:599929-600113:1:exon
so has part: feature:600229-600313:1:exon
so has part: feature:600454-600506:1:exon
so has part: feature:603609-606785:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:594674-594820:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:594985-595046:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:595772-596021:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:596121-596336:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:596413-599685:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:599929-600113:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:600229-600313:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:600454-600506:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:603609-606785:1:exon

LOC109798449
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 3821
gene: LOC109798449
product: altered inheritance of mitochondria protein 3, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_003804113.1
SIO_010081: LOC109798449
so part of: LOC109798449
location: join(594674..594820,594985..595046,595772..596021,596121..596336,596413..599685,599929..600113,600229..600313,600454..600506,602404..602611)
location: region:594674-602611:1
so has part: feature:594674-594820:1:exon
so has part: feature:594985-595046:1:exon
so has part: feature:595772-596021:1:exon
so has part: feature:596121-596336:1:exon
so has part: feature:596413-599685:1:exon
so has part: feature:599929-600113:1:exon
so has part: feature:600229-600313:1:exon
so has part: feature:600454-600506:1:exon
so has part: feature:602404-602611:1:exon

position:602611:1
position: 602611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:594674-594820:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:594985-595046:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:595772-596021:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:596121-596336:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:596413-599685:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:599929-600113:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:600229-600313:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:600454-600506:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:602404-602611:1:exon

position:602404:1
position: 602404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109798449
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798449
product: altered inheritance of mitochondria protein 3, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_029271250.1
SIO_010081: LOC109798449
subclass of: SO_0000673
so part of: LOC109798449
location: join(594674..594820,594985..595046,595772..596021,596121..596336,596413..599685,599929..600113,600229..600313,600454..600745)
location: region:594674-600745:1
so has part: feature:594674-594820:1:exon
so has part: feature:594985-595046:1:exon
so has part: feature:595772-596021:1:exon
so has part: feature:596121-596336:1:exon
so has part: feature:596413-599685:1:exon
so has part: feature:599929-600113:1:exon
so has part: feature:600229-600313:1:exon
so has part: feature:600454-600745:1:exon

position:600745:1
position: 600745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:594674-594820:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:594985-595046:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:595772-596021:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:596121-596336:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:596413-599685:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:599929-600113:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:600229-600313:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:600454-600745:1:exon

LOC109798449
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 3821
gene: LOC109798449
product: altered inheritance of mitochondria protein 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_003804107.1
SIO_010081: LOC109798449
so part of: LOC109798449
location: join(594675..594820,594985..595046,595772..596021,596121..596336,596413..599685,599929..600113,600229..600371,600454..600506,601159..601328,603609..606785)
location: region:594675-606785:1
so has part: feature:594675-594820:1:exon
so has part: feature:594985-595046:1:exon
so has part: feature:595772-596021:1:exon
so has part: feature:596121-596336:1:exon
so has part: feature:596413-599685:1:exon
so has part: feature:599929-600113:1:exon
so has part: feature:600229-600371:1:exon
so has part: feature:600454-600506:1:exon
so has part: feature:601159-601328:1:exon
so has part: feature:603609-606785:1:exon

position:594675:1
position: 594675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:594675-594820:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:594985-595046:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:595772-596021:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:596121-596336:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:596413-599685:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:599929-600113:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:600229-600371:1:exon

position:600371:1
position: 600371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:600454-600506:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:601159-601328:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:603609-606785:1:exon

LOC109798449
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 3821
gene: LOC109798449
product: altered inheritance of mitochondria protein 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_003804106.1
SIO_010081: LOC109798449
so part of: LOC109798449
location: join(594675..594820,594985..595046,595772..596021,596121..596336,596413..599685,599929..600113,600229..600371,600454..600506,601170..601328,603609..606785)
location: region:594675-606785:1
so has part: feature:594675-594820:1:exon
so has part: feature:594985-595046:1:exon
so has part: feature:595772-596021:1:exon
so has part: feature:596121-596336:1:exon
so has part: feature:596413-599685:1:exon
so has part: feature:599929-600113:1:exon
so has part: feature:600229-600371:1:exon
so has part: feature:600454-600506:1:exon
so has part: feature:601170-601328:1:exon
so has part: feature:603609-606785:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:594675-594820:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:594985-595046:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:595772-596021:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:596121-596336:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:596413-599685:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:599929-600113:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:600229-600371:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:600454-600506:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:601170-601328:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:603609-606785:1:exon

LOC109798449
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 3821
gene: LOC109798449
product: altered inheritance of mitochondria protein 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XR_003804108.1
SIO_010081: LOC109798449
so part of: LOC109798449
location: join(594675..594820,594985..595046,595772..596021,596121..596336,596413..599685,599929..600113,600229..600371,600454..600506,603609..606785)
location: region:594675-606785:1
so has part: feature:594675-594820:1:exon
so has part: feature:594985-595046:1:exon
so has part: feature:595772-596021:1:exon
so has part: feature:596121-596336:1:exon
so has part: feature:596413-599685:1:exon
so has part: feature:599929-600113:1:exon
so has part: feature:600229-600371:1:exon
so has part: feature:600454-600506:1:exon
so has part: feature:603609-606785:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:594675-594820:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:594985-595046:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:595772-596021:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:596121-596336:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:596413-599685:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:599929-600113:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:600229-600371:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:600454-600506:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:603609-606785:1:exon

LOC109798449
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 3821
gene: LOC109798449
product: altered inheritance of mitochondria protein 3, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_003804109.1
SIO_010081: LOC109798449
so part of: LOC109798449
location: join(594675..594820,594985..595046,595772..596021,596121..596336,596413..599685,599929..600113,600229..600371,600454..600506,602404..602611)
location: region:594675-602611:1
so has part: feature:594675-594820:1:exon
so has part: feature:594985-595046:1:exon
so has part: feature:595772-596021:1:exon
so has part: feature:596121-596336:1:exon
so has part: feature:596413-599685:1:exon
so has part: feature:599929-600113:1:exon
so has part: feature:600229-600371:1:exon
so has part: feature:600454-600506:1:exon
so has part: feature:602404-602611:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:594675-594820:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:594985-595046:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:595772-596021:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:596121-596336:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:596413-599685:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:599929-600113:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:600229-600371:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:600454-600506:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:602404-602611:1:exon

LOC109798449
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 3821
gene: LOC109798449
product: altered inheritance of mitochondria protein 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XR_003804103.1
SIO_010081: LOC109798449
so part of: LOC109798449
location: join(594675..594820,594985..595046,595772..596021,596121..596336,596413..599685,599929..600113,600229..600371,600454..600745)
location: region:594675-600745:1
so has part: feature:594675-594820:1:exon
so has part: feature:594985-595046:1:exon
so has part: feature:595772-596021:1:exon
so has part: feature:596121-596336:1:exon
so has part: feature:596413-599685:1:exon
so has part: feature:599929-600113:1:exon
so has part: feature:600229-600371:1:exon
so has part: feature:600454-600745:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:594675-594820:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:594985-595046:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:595772-596021:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:596121-596336:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:596413-599685:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:599929-600113:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:600229-600371:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:600454-600745:1:exon

LOC109798449
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 3821
gene: LOC109798449
product: altered inheritance of mitochondria protein 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XR_003804104.1
SIO_010081: LOC109798449
so part of: LOC109798449
location: join(594675..594820,594985..595060,595772..596021,596121..596336,596413..599685,599929..600113,600229..600371,600454..600743)
location: region:594675-600743:1
so has part: feature:594675-594820:1:exon
so has part: feature:594985-595060:1:exon
so has part: feature:595772-596021:1:exon
so has part: feature:596121-596336:1:exon
so has part: feature:596413-599685:1:exon
so has part: feature:599929-600113:1:exon
so has part: feature:600229-600371:1:exon
so has part: feature:600454-600743:1:exon

position:600743:1
position: 600743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:594675-594820:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:594985-595060:1:exon

position:595060:1
position: 595060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:595772-596021:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:596121-596336:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:596413-599685:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:599929-600113:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:600229-600371:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:600454-600743:1:exon

LOC109798449
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 3821
gene: LOC109798449
product: altered inheritance of mitochondria protein 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XR_003804105.1
SIO_010081: LOC109798449
so part of: LOC109798449
location: join(594675..594820,594985..595046,595809..596021,596121..596336,596413..599685,599929..600113,600229..600371,600454..600743)
location: region:594675-600743:1
so has part: feature:594675-594820:1:exon
so has part: feature:594985-595046:1:exon
so has part: feature:595809-596021:1:exon
so has part: feature:596121-596336:1:exon
so has part: feature:596413-599685:1:exon
so has part: feature:599929-600113:1:exon
so has part: feature:600229-600371:1:exon
so has part: feature:600454-600743:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:594675-594820:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:594985-595046:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:595809-596021:1:exon

position:595809:1
position: 595809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:596121-596336:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:596413-599685:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:599929-600113:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:600229-600371:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:600454-600743:1:exon

LOC109798449
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798449
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: altered inheritance of mitochondria protein 3
translation: MGFDNECIVNIQSLAGEYFCPVCRLLVFPNEALQSQCTHLYCKPCLTYVVSTTRACPYDGYLVTEADSKPLTESNKALAETIGKIAVHCLYHRSGCTWQGTLSECTSHCSGCAFGNSPVVCNRCGIQIVHRQVQEHAQNCPGVQGQVQQVAITQDPSATSAVASTDQNQTTAPVAATASQALTSQTAVTTMPGQVSNQLPNSASQTQAVVQPTAEQWYQQQQQYQQYYQQYPGQDPYQQQYQHYYPYQQSGVPQYQQAYGQPQPQAQSQPQPQTQHQSQPQLQPQPQAQGLSQPPSHIQAPVAPSSQNQMQVQQQPQQLQPAVQPHGQTNHAPGHGQALPQAQTQPYPYPQVQPHSVQPQPQQHMQVPPYQQPLPQMQHSQPQIQQPVQKYPVPQPQVHPQLQPNAPVQHVSQLPMPPHQPVTPNVQPQVQSATSHSVTGHHSYPQPLPHPNMQPGIPHHTMHMHAQSGPQPQAQHPVQMQNQFPPQIPTTRPNQSHTMFPNQQQPALLPSSVQGQTNPPLQQQPIYTHNQQPGQINQRPTLQPVQQIPQQPYAQHQMPMPPHLRPQGPAHSFPKHAYPQSQGNAALSNSIQHSQSQNPAGRPLAPNHAGHLQPFAQSPNTIPVRPGQNGAGYLPENQKLLVGTNNQVQLPSELQSRAPESIDRQGDVVEQQTDSASGKQGKFFKDLDIVSGSAIELKSEKVETDLKPVEAGNKQNNEDPHSLKTSVPNGNALENSDSVNKNLGMGESAESNWKPSIGNKSVGSMHEVQNDSNEHSVQGNEFQDGHPPKTETKLPDSESDKLGNDDNPAHSVSQSNGGFAQLSHTATFSDQSKHQQQMINYGPPSVQQRSSAMLASQLPHPTVPNQLLSSEHSSALVRNHGSAHAHHSGQPLTENFPQTMFKQQQDSDIQFNNPGRSFQSQSLGPPRPFNQVHEPPFHAGASNLSRLGGPQFGAPLPGDMHGRMTANVPPHAPEGFGLQDGRFKPFHVPNQQNIDRREFDDDLKKFSRMPLDAEPVSKFGNFSLGAHEAGKRPVGIHDNVIKKLGSTLHPGYLGPGPGYGRHHMDGMAPRSPVGEYAEMSSRRLGPHSGSLVGKSGIDDFDGRVARHFGDFRDSRFPRLPSHLHGDEFDGFGNFRMGEHPRSGDFIGQDEFPGHFRRGEHLGPHNIPRHLQLGDPVGFGAHPGHMRAVELGGFRSFESFNKGNRPGHPQLGEPGFRSSFSLAGFPNDAGFLSGDIRSFDNLRRRKASSMGWCRICKVDCETVEGLDLHSQTKEHQMMAMDIVKTIKQNAKKQKLIPSEQGSVDEGNKMHNAVFEGRGNKH
SIO_010081: LOC109798449
subclass of: SO_0000673
so part of: LOC109798449
location: join(595815..596021,596121..596336,596413..599685,599929..600113,600229..600310)
location: region:595815-600310:1
so has part: feature:595815-596021:1:exon
so has part: feature:596121-596336:1:exon
so has part: feature:596413-599685:1:exon
so has part: feature:599929-600113:1:exon
so has part: feature:600229-600310:1:exon

XP_029127083.1
type: Protein
SIO_000068: ncbiprotein

position:595815:1
position: 595815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:600310:1
position: 600310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:595815-596021:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:596121-596336:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:596413-599685:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:599929-600113:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:600229-600310:1:exon

LOC109798639
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798639
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 615454..623047
location: region:615454-623047:1
so has part: feature:615454-623047:1:exon
subclass of: SO_0000010

109798639
type: Gene
SIO_000068: ncbigene

position:615454:1
position: 615454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:623047:1
position: 623047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:615454-623047:1:exon

LOC109798639
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798639
product: uncharacterized LOC109798639, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_020358979.2
SIO_010081: LOC109798639
subclass of: SO_0000673
so part of: LOC109798639
location: join(615454..615791,615951..616281,616580..616754,616837..616886,617696..617788,617868..617956,618677..618755,619142..619224,619764..619842,619962..620685,620927..621007,621570..622152,622455..623047)
location: region:615454-623047:1
so has part: feature:615454-615791:1:exon
so has part: feature:615951-616281:1:exon
so has part: feature:616580-616754:1:exon
so has part: feature:616837-616886:1:exon
so has part: feature:617696-617788:1:exon
so has part: feature:617868-617956:1:exon
so has part: feature:618677-618755:1:exon
so has part: feature:619142-619224:1:exon
so has part: feature:619764-619842:1:exon
so has part: feature:619962-620685:1:exon
so has part: feature:620927-621007:1:exon
so has part: feature:621570-622152:1:exon
so has part: feature:622455-623047:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:615454-615791:1:exon

position:615791:1
position: 615791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:615951-616281:1:exon

position:615951:1
position: 615951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:616281:1
position: 616281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:616580-616754:1:exon

position:616580:1
position: 616580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:616754:1
position: 616754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:616837-616886:1:exon

position:616837:1
position: 616837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:616886:1
position: 616886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:617696-617788:1:exon

position:617696:1
position: 617696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:617788:1
position: 617788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:617868-617956:1:exon

position:617868:1
position: 617868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:617956:1
position: 617956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:618677-618755:1:exon

position:618677:1
position: 618677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:618755:1
position: 618755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:619142-619224:1:exon

position:619142:1
position: 619142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:619224:1
position: 619224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:619764-619842:1:exon

position:619764:1
position: 619764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:619842:1
position: 619842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:619962-620685:1:exon

position:619962:1
position: 619962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:620685:1
position: 620685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:620927-621007:1:exon

position:620927:1
position: 620927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:621007:1
position: 621007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:621570-622152:1:exon

position:621570:1
position: 621570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:622152:1
position: 622152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:622455-623047:1:exon

position:622455:1
position: 622455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109798639
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798639
product: uncharacterized LOC109798639, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_020358980.2
SIO_010081: LOC109798639
subclass of: SO_0000673
so part of: LOC109798639
location: join(615454..615791,615951..616275,616580..616754,616837..616886,617696..617788,617868..617956,618677..618755,619142..619224,619764..619842,619962..620685,620927..621007,621570..622152,622455..623047)
location: region:615454-623047:1
so has part: feature:615454-615791:1:exon
so has part: feature:615951-616275:1:exon
so has part: feature:616580-616754:1:exon
so has part: feature:616837-616886:1:exon
so has part: feature:617696-617788:1:exon
so has part: feature:617868-617956:1:exon
so has part: feature:618677-618755:1:exon
so has part: feature:619142-619224:1:exon
so has part: feature:619764-619842:1:exon
so has part: feature:619962-620685:1:exon
so has part: feature:620927-621007:1:exon
so has part: feature:621570-622152:1:exon
so has part: feature:622455-623047:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:615454-615791:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:615951-616275:1:exon

position:616275:1
position: 616275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:616580-616754:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:616837-616886:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:617696-617788:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:617868-617956:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:618677-618755:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:619142-619224:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:619764-619842:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:619962-620685:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:620927-621007:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:621570-622152:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:622455-623047:1:exon

LOC109798639
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798639
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109798639 isoform X1
translation: MAFHVACPITCRRICFCALGFPRALHAPDPANAFLHDVAALGDFLANATVDDATVQVAVPKVLPPPPPPPTTDGVPPGVDAIDESASMKAKRIALQRKGAAAMIAAEEYARRFESGDVVVSNTPGNLTGDEQGQSNRTYCRFCKCGEVEGSERAQKMLSCKSCGKKYHRNCLRSWGRHRDLFHWSSWTCPLCRICEACRRTGDPFKFMFCKRCDGAYHCYCLQPPHKSVCNGPYLCPKHSRCHSCGSNVPGNGLSVRWFMSYTCCDACGRLFTKGNYCPVCLKVYRDSESTPMVCCDTCQLWVHCQCDNISDERYHQFQVDGNLQYKCPTCRGECYQVKNPEDAAQEIWRRRNIAERDLIASLRAAAGLPTQEEIFSISPYSDDEDGGPLKLKSESTRSFKFSLKNLSSDSPKKKSSNKKTAKKKDSQSFMTSKIDTHNSFEGHSDIKSLHSLDDDKNDDVQSQRNEGPDVYSSPATGSLSQTDAPCPINQPGVLKHKFVDEVMVSDEERKPRFVRIKSNKAHILDSEEESGKQNVKTQNVKGKKLVINLGARKINVASSPRSDTSSCQKDQDLVAVNGNEDISQSRKGDKFASDRQDGTARHIDGNRVDSGQSNFFKVSGREGNLIKLGKVKPDVSEFNPTSGRGNMSDGRVKHNTDGTIDQVGLKVTSRGERVHLGKQSEVSSDACDETDDNNNRTPSHSLPKDSKPLLKFKFKKPSIESQNSPHQEEEKIIKGQRSKRKRPSPFKEKTPFNESENASQSHQDSVMDEILDANWILMKLGSDAIGKRVEVHQSSDNSWHKGVVTDVVDGTSKLHVALDDGKVKTLELRKQGVRFVSQKQKRSKT
SIO_010081: LOC109798639
subclass of: SO_0000673
so part of: LOC109798639
location: join(615760..615791,615951..616281,616580..616754,616837..616886,617696..617788,617868..617956,618677..618755,619142..619224,619764..619842,619962..620685,620927..621007,621570..622152,622455..622596)
location: region:615760-622596:1
so has part: feature:615760-615791:1:exon
so has part: feature:615951-616281:1:exon
so has part: feature:616580-616754:1:exon
so has part: feature:616837-616886:1:exon
so has part: feature:617696-617788:1:exon
so has part: feature:617868-617956:1:exon
so has part: feature:618677-618755:1:exon
so has part: feature:619142-619224:1:exon
so has part: feature:619764-619842:1:exon
so has part: feature:619962-620685:1:exon
so has part: feature:620927-621007:1:exon
so has part: feature:621570-622152:1:exon
so has part: feature:622455-622596:1:exon

XP_020214568.1
type: Protein
SIO_000068: ncbiprotein

position:615760:1
position: 615760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:622596:1
position: 622596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:615760-615791:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:615951-616281:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:616580-616754:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:616837-616886:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:617696-617788:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:617868-617956:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:618677-618755:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:619142-619224:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:619764-619842:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:619962-620685:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:620927-621007:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:621570-622152:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:622455-622596:1:exon

LOC109798639
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798639
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109798639 isoform X2
translation: MAFHVACPITCRRICFCALGFPRALHAPDPANAFLHDVAALGDFLANATVDDATVQVAVPKVLPPPPPPPTTDGVPPGVDAIDESASMKAKRIALQRKGAAAMIAAEEYARRFESGDVVNTPGNLTGDEQGQSNRTYCRFCKCGEVEGSERAQKMLSCKSCGKKYHRNCLRSWGRHRDLFHWSSWTCPLCRICEACRRTGDPFKFMFCKRCDGAYHCYCLQPPHKSVCNGPYLCPKHSRCHSCGSNVPGNGLSVRWFMSYTCCDACGRLFTKGNYCPVCLKVYRDSESTPMVCCDTCQLWVHCQCDNISDERYHQFQVDGNLQYKCPTCRGECYQVKNPEDAAQEIWRRRNIAERDLIASLRAAAGLPTQEEIFSISPYSDDEDGGPLKLKSESTRSFKFSLKNLSSDSPKKKSSNKKTAKKKDSQSFMTSKIDTHNSFEGHSDIKSLHSLDDDKNDDVQSQRNEGPDVYSSPATGSLSQTDAPCPINQPGVLKHKFVDEVMVSDEERKPRFVRIKSNKAHILDSEEESGKQNVKTQNVKGKKLVINLGARKINVASSPRSDTSSCQKDQDLVAVNGNEDISQSRKGDKFASDRQDGTARHIDGNRVDSGQSNFFKVSGREGNLIKLGKVKPDVSEFNPTSGRGNMSDGRVKHNTDGTIDQVGLKVTSRGERVHLGKQSEVSSDACDETDDNNNRTPSHSLPKDSKPLLKFKFKKPSIESQNSPHQEEEKIIKGQRSKRKRPSPFKEKTPFNESENASQSHQDSVMDEILDANWILMKLGSDAIGKRVEVHQSSDNSWHKGVVTDVVDGTSKLHVALDDGKVKTLELRKQGVRFVSQKQKRSKT
SIO_010081: LOC109798639
subclass of: SO_0000673
so part of: LOC109798639
location: join(615760..615791,615951..616275,616580..616754,616837..616886,617696..617788,617868..617956,618677..618755,619142..619224,619764..619842,619962..620685,620927..621007,621570..622152,622455..622596)
location: region:615760-622596:1
so has part: feature:615760-615791:1:exon
so has part: feature:615951-616275:1:exon
so has part: feature:616580-616754:1:exon
so has part: feature:616837-616886:1:exon
so has part: feature:617696-617788:1:exon
so has part: feature:617868-617956:1:exon
so has part: feature:618677-618755:1:exon
so has part: feature:619142-619224:1:exon
so has part: feature:619764-619842:1:exon
so has part: feature:619962-620685:1:exon
so has part: feature:620927-621007:1:exon
so has part: feature:621570-622152:1:exon
so has part: feature:622455-622596:1:exon

XP_020214569.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:615760-615791:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:615951-616275:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:616580-616754:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:616837-616886:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:617696-617788:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:617868-617956:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:618677-618755:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:619142-619224:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:619764-619842:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:619962-620685:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:620927-621007:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:621570-622152:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:622455-622596:1:exon

LOC109798857
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798857
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 624452..627179
location: region:624452-627179:1
so has part: feature:624452-627179:1:exon
subclass of: SO_0000010

109798857
type: Gene
SIO_000068: ncbigene

position:624452:1
position: 624452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:627179:1
position: 627179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:624452-627179:1:exon

LOC109798857
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798857
product: DNA-directed RNA polymerases II, IV and V subunit 11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_020359264.2
SIO_010081: LOC109798857
subclass of: SO_0000673
so part of: LOC109798857
location: join(624452..624604,624689..624778,624877..624955,625891..625986,626723..627179)
location: region:624452-627179:1
so has part: feature:624452-624604:1:exon
so has part: feature:624689-624778:1:exon
so has part: feature:624877-624955:1:exon
so has part: feature:625891-625986:1:exon
so has part: feature:626723-627179:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:624452-624604:1:exon

position:624604:1
position: 624604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:624689-624778:1:exon

position:624689:1
position: 624689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:624778:1
position: 624778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:624877-624955:1:exon

position:624877:1
position: 624877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:624955:1
position: 624955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:625891-625986:1:exon

position:625891:1
position: 625891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:625986:1
position: 625986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:626723-627179:1:exon

position:626723:1
position: 626723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109798857
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798857
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-directed RNA polymerases II, IV and V subunit 11
translation: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDPNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQSINDLDREFDHLKNAFEAEMLKLARDY
SIO_010081: LOC109798857
subclass of: SO_0000673
so part of: LOC109798857
location: join(624552..624604,624689..624778,624877..624955,625891..625986,626723..626755)
location: region:624552-626755:1
so has part: feature:624552-624604:1:exon
so has part: feature:624689-624778:1:exon
so has part: feature:624877-624955:1:exon
so has part: feature:625891-625986:1:exon
so has part: feature:626723-626755:1:exon

XP_020214853.1
type: Protein
SIO_000068: ncbiprotein

position:624552:1
position: 624552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:626755:1
position: 626755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:624552-624604:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:624689-624778:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:624877-624955:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:625891-625986:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:626723-626755:1:exon

LOC109798856
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798856
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(627555..630682)
location: region:627555-630682:-1
so has part: feature:627555-630682:-1:exon
subclass of: SO_0000010

109798856
type: Gene
SIO_000068: ncbigene

position:627555:-1
position: 627555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:630682:-1
position: 630682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:627555-630682:-1:exon

LOC109798856
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798856
product: cation/H(+) antiporter 28
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 66% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_020359262.2
SIO_010081: LOC109798856
subclass of: SO_0000673
so part of: LOC109798856
location: complement(join(627555..628163,628430..629023,629196..630203,630294..630682))
location: region:627555-630682:-1
so has part: feature:630294-630682:-1:exon
so has part: feature:629196-630203:-1:exon
so has part: feature:628430-629023:-1:exon
so has part: feature:627555-628163:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:630294-630682:-1:exon

position:630294:-1
position: 630294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:629196-630203:-1:exon

position:629196:-1
position: 629196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:630203:-1
position: 630203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:628430-629023:-1:exon

position:628430:-1
position: 628430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:629023:-1
position: 629023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:627555-628163:-1:exon

position:628163:-1
position: 628163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109798856
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798856
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cation/H(+) antiporter 28
translation: MAVAITQCSEKLGYLILQLGKNFLVFMAMVIACNGAHYVLKPYAQPRIASDIIVGLIMGNIPFLRKLYDEFNSTFGFIIDFGMMCYMFALGIEMDPYALLRRPSKDAQIAYSGIIFTFVISCSLTPLLHYFTEERGFAFILCLSALVSSTASPVLTRLLTNLKIGKSDIGKLVIGAGMHADFVCSLLLSVGYIFMPAEAFCVGPQPHSHVEKTTQSVITMSVAVVAQTVFTGLVSPVFMAWVNDENPEGRPMKGPHLVLSIAFVVIICASSTLYNYNPVLSAFITGTCFPREGRVSKWVVGKINYLLTTIFYPIFFLWMGYAADFTRLAPGDPVTWLRLILPVVMAVVGKVAGTLAVGALLGFHWPESLVIGLLLVTKGHFQIYMVIKGINCGSTISAGIMSVIATFLTVVHAPIIVAHIIKRARRRAPTHTMALQLLDPSSELRILLCVHGPPNVPASINFMEISRGTTEPGLLVYLAEIIELTDQIEATVETGEGIHASTVRDKAVIEMREQVTSSFKAYLDNDGDGITLKRSLAISTINNMAQNICSLAEELMIALIILPFHRSQRQDGKLDGGNQGFRYVNRKLLKTAPCSVGILVNRGFGSIPKISRSEVTLQVAAIFIGGKDDREVLAYAGRVAWHSGVKVTVIRFLVDTSAESSRLAAYRVSLPEQEEEMGLDDECFAQFYEKHIVAGRIHYMEKHLANAGETFATLRSLEGQYSLVVVGREGGINSILTKGMNDWQQCPELGPIGDVLSGPDFSTSVSVLIIQQHKLRGELDGLDEDFSIM
SIO_010081: LOC109798856
subclass of: SO_0000673
so part of: LOC109798856
location: complement(join(627555..628163,628430..629023,629196..630203,630294..630452))
location: region:627555-630452:-1
so has part: feature:630294-630452:-1:exon
so has part: feature:629196-630203:-1:exon
so has part: feature:628430-629023:-1:exon
so has part: feature:627555-628163:-1:exon

XP_020214851.1
type: Protein
SIO_000068: ncbiprotein

position:630452:-1
position: 630452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:630294-630452:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:629196-630203:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:628430-629023:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:627555-628163:-1:exon

LOC109798874
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798874
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 634245..645222
location: region:634245-645222:1
so has part: feature:634245-645222:1:exon
subclass of: SO_0000010

109798874
type: Gene
SIO_000068: ncbigene

position:634245:1
position: 634245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:645222:1
position: 645222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:634245-645222:1:exon

LOC109798874
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798874
product: uncharacterized LOC109798874
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_020359293.2
SIO_010081: LOC109798874
subclass of: SO_0000673
so part of: LOC109798874
location: join(634245..634593,634714..634788,635308..635423,636272..636386,636519..636647,636799..636846,637210..637331,637420..637616,637712..638004,638163..638312,638428..638949,639060..639206,641040..641115,642572..642699,642949..643149,643226..643363,643466..643597,644011..644244,644454..645222)
location: region:634245-645222:1
so has part: feature:634245-634593:1:exon
so has part: feature:634714-634788:1:exon
so has part: feature:635308-635423:1:exon
so has part: feature:636272-636386:1:exon
so has part: feature:636519-636647:1:exon
so has part: feature:636799-636846:1:exon
so has part: feature:637210-637331:1:exon
so has part: feature:637420-637616:1:exon
so has part: feature:637712-638004:1:exon
so has part: feature:638163-638312:1:exon
so has part: feature:638428-638949:1:exon
so has part: feature:639060-639206:1:exon
so has part: feature:641040-641115:1:exon
so has part: feature:642572-642699:1:exon
so has part: feature:642949-643149:1:exon
so has part: feature:643226-643363:1:exon
so has part: feature:643466-643597:1:exon
so has part: feature:644011-644244:1:exon
so has part: feature:644454-645222:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:634245-634593:1:exon

position:634593:1
position: 634593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:634714-634788:1:exon

position:634714:1
position: 634714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:634788:1
position: 634788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:635308-635423:1:exon

position:635308:1
position: 635308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:635423:1
position: 635423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:636272-636386:1:exon

position:636272:1
position: 636272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:636386:1
position: 636386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:636519-636647:1:exon

position:636519:1
position: 636519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:636647:1
position: 636647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:636799-636846:1:exon

position:636799:1
position: 636799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:636846:1
position: 636846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:637210-637331:1:exon

position:637210:1
position: 637210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:637331:1
position: 637331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:637420-637616:1:exon

position:637420:1
position: 637420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:637616:1
position: 637616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:637712-638004:1:exon

position:637712:1
position: 637712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:638004:1
position: 638004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:638163-638312:1:exon

position:638163:1
position: 638163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:638312:1
position: 638312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:638428-638949:1:exon

position:638428:1
position: 638428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:638949:1
position: 638949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:639060-639206:1:exon

position:639060:1
position: 639060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:639206:1
position: 639206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:641040-641115:1:exon

position:641040:1
position: 641040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:641115:1
position: 641115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:642572-642699:1:exon

position:642572:1
position: 642572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:642699:1
position: 642699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:642949-643149:1:exon

position:642949:1
position: 642949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:643149:1
position: 643149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:643226-643363:1:exon

position:643226:1
position: 643226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:643363:1
position: 643363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:643466-643597:1:exon

position:643466:1
position: 643466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:643597:1
position: 643597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:644011-644244:1:exon

position:644011:1
position: 644011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:644244:1
position: 644244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:644454-645222:1:exon

position:644454:1
position: 644454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109798874
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798874
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109798874
translation: MSVISRNIWPVCGSLCCFCPALRERSRHPIKRYKKLLADIFPRSPDEEPNERMIGKLCEYAARNPLRVPKITSYLEQRCYRELRTENYQSVKVVICIYRKLLISCKDQMPLFASSLLSIIQILLDQSRHDEVQILGCQTLFDFVNNQRDGTYMFNLDGFITKLCNLAQEMGDDVKIQHLRAAGLQVLSSMVWFMGEFTHISVEFDNVVSVVLENYGDVNQDSENANSMRVYSWRSIVNDKGEANVPMDDATNPGFWSRVCIQNMAKLAKEGTTVRRVLESLFRYFDNANLWSPEHGLALSVLLNMQSIIENSGQNTHLLLSILVKHLDHKNVLKNPNMQLDIVGVITHLAQQTRVQQSVAIIGALSDMMRHLRKSIHCSIDDSNLGSEIIQWNQKYRLEVDECLVQLTIKIADAGPVIDTMAVLLENMSNITVMARTLIAAVYRTAQIVASIPNLSYQNKAFPEALFHQLLLAMVHADHETRVGAHRIFSVVLVPSSVCPQPSSSDPPITKAADIQRMLSRNVSVFSSSAALFEKLERKQNSLPEDNSNTDGKVNDNTILNRLKSTYSRTASKRKSGIGSTEYLENRNSKNSNSSVMNRLKSSYTRVTSVRKPQITTTGEENITNTSNTTDKQQVLPIRLSSHQITLLLSSIWAQSIYPLNTPQNFEAIAHTYSLVLLVARSKNSSDEALTQSFQLAFSLRSISLNENVKLQPSRRRSLFTLATSMIIFASKAYNVLSLISIAKMALADKTADPFLQLVNDSKLQAVTDTVRLPSNAYGSKEDDEDALKSLSAVNLTESQSKESFATMIVQSLGKSSKESSMLKEQLLNEFSPDDACPLGTQLSAETTGNMYESGLKDDKLPDMVDISLFTIDDDIPASGLESQDNSDAQQQPSQNLSLLSVDDILGSVSETTHQVGRISISTPFDMPYKEMALHCENLLVGKQQKLSTFMAANSIQGCSFRIPLPEYNQEKDASSNSNVQLTLPSSGNPFLDTNFDSTSHNTLPGTAPMLCATAYQQHQPAFFQLPASRPYDNFLKAAGC
SIO_010081: LOC109798874
subclass of: SO_0000673
so part of: LOC109798874
location: join(634459..634593,634714..634788,635308..635423,636272..636386,636519..636647,636799..636846,637210..637331,637420..637616,637712..638004,638163..638312,638428..638949,639060..639206,641040..641115,642572..642699,642949..643149,643226..643363,643466..643597,644011..644244,644454..644621)
location: region:634459-644621:1
so has part: feature:634459-634593:1:exon
so has part: feature:634714-634788:1:exon
so has part: feature:635308-635423:1:exon
so has part: feature:636272-636386:1:exon
so has part: feature:636519-636647:1:exon
so has part: feature:636799-636846:1:exon
so has part: feature:637210-637331:1:exon
so has part: feature:637420-637616:1:exon
so has part: feature:637712-638004:1:exon
so has part: feature:638163-638312:1:exon
so has part: feature:638428-638949:1:exon
so has part: feature:639060-639206:1:exon
so has part: feature:641040-641115:1:exon
so has part: feature:642572-642699:1:exon
so has part: feature:642949-643149:1:exon
so has part: feature:643226-643363:1:exon
so has part: feature:643466-643597:1:exon
so has part: feature:644011-644244:1:exon
so has part: feature:644454-644621:1:exon

XP_020214882.1
type: Protein
SIO_000068: ncbiprotein

position:634459:1
position: 634459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:644621:1
position: 644621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:634459-634593:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:634714-634788:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:635308-635423:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:636272-636386:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:636519-636647:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:636799-636846:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:637210-637331:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:637420-637616:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:637712-638004:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:638163-638312:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:638428-638949:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:639060-639206:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:641040-641115:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:642572-642699:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:642949-643149:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:643226-643363:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:643466-643597:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:644011-644244:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:644454-644621:1:exon

LOC109798248
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798248
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 649116..653353
location: region:649116-653353:1
so has part: feature:649116-653353:1:exon
subclass of: SO_0000010

109798248
type: Gene
SIO_000068: ncbigene

position:649116:1
position: 649116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:653353:1
position: 653353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:649116-653353:1:exon

LOC109798248
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798248
product: peptidyl-prolyl cis-trans isomerase FKBP42
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020358452.2
SIO_010081: LOC109798248
subclass of: SO_0000673
so part of: LOC109798248
location: join(649116..649218,649360..649400,649496..649681,650289..650378,650507..650691,650759..650881,651222..651374,652821..653353)
location: region:649116-653353:1
so has part: feature:649116-649218:1:exon
so has part: feature:649360-649400:1:exon
so has part: feature:649496-649681:1:exon
so has part: feature:650289-650378:1:exon
so has part: feature:650507-650691:1:exon
so has part: feature:650759-650881:1:exon
so has part: feature:651222-651374:1:exon
so has part: feature:652821-653353:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:649116-649218:1:exon

position:649218:1
position: 649218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:649360-649400:1:exon

position:649360:1
position: 649360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:649400:1
position: 649400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:649496-649681:1:exon

position:649496:1
position: 649496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:649681:1
position: 649681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:650289-650378:1:exon

position:650289:1
position: 650289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:650378:1
position: 650378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:650507-650691:1:exon

position:650507:1
position: 650507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:650691:1
position: 650691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:650759-650881:1:exon

position:650759:1
position: 650759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:650881:1
position: 650881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:651222-651374:1:exon

position:651222:1
position: 651222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:651374:1
position: 651374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:652821-653353:1:exon

position:652821:1
position: 652821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109798248
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798248
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-prolyl cis-trans isomerase FKBP42
translation: MEEVQESQTPSSLGQEDENGVITESSAFVKGEPEQEFSSNPPKVDSEAEVLHDKVTKQIIKEGHGQKPSKYSTCFFHYRAWSEKTQHKFEDTWQEQRPTEMVLGKEKKEMTGLGIGVASMKAGERALLHVGWELGYGEEGSFSFPNVPPMADLVYEVELIGFDETKEGKARSDMTVEERIGAADRRKMDGNALYQDGKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPSHLNTAACLIKLNRYEEAIGQCTIVLGEDENNVKALFRRGKARAALGQTDAAKEDFLKARKYAPEDKAIAKELRLLAEHDKAVYQKQKEIYKGIFGPRPEPVPKRRNWLILIWQWLLSVFYRLLTLFKRESHKSD
SIO_010081: LOC109798248
subclass of: SO_0000673
so part of: LOC109798248
location: join(649361..649400,649496..649681,650289..650378,650507..650691,650759..650881,651222..651374,652821..653156)
location: region:649361-653156:1
so has part: feature:649361-649400:1:exon
so has part: feature:649496-649681:1:exon
so has part: feature:650289-650378:1:exon
so has part: feature:650507-650691:1:exon
so has part: feature:650759-650881:1:exon
so has part: feature:651222-651374:1:exon
so has part: feature:652821-653156:1:exon

XP_020214041.1
type: Protein
SIO_000068: ncbiprotein

position:649361:1
position: 649361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:653156:1
position: 653156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:649361-649400:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:649496-649681:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:650289-650378:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:650507-650691:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:650759-650881:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:651222-651374:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:652821-653156:1:exon

LOC109798336
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798336
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 664304..669710
location: region:664304-669710:1
so has part: feature:664304-669710:1:exon
subclass of: SO_0000010

109798336
type: Gene
SIO_000068: ncbigene

position:664304:1
position: 664304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:669710:1
position: 669710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:664304-669710:1:exon

LOC109798336
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798336
product: protein OBERON 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_029271251.1
SIO_010081: LOC109798336
subclass of: SO_0000673
so part of: LOC109798336
location: join(664304..667013,667161..667782,668718..669710)
location: region:664304-669710:1
so has part: feature:664304-667013:1:exon
so has part: feature:667161-667782:1:exon
so has part: feature:668718-669710:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:664304-667013:1:exon

position:667013:1
position: 667013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:667161-667782:1:exon

position:667161:1
position: 667161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:667782:1
position: 667782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:668718-669710:1:exon

position:668718:1
position: 668718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109798336
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798336
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein OBERON 4
translation: MKRLRSSEDLHSYGEKNSGCKDSNLNRSFSSAQRTFYYKQENARKGLVSSSSSSSRYERDRTVEEDREGSRVVRKRSEHDFEGFDRRKGFDRYRESERGLIHRSESFCGGGGSRRDQFPKGFRSERERSRREGSVSSWRRGLKDLDERERERERVVRSPKGLRDVKSPSWSKDSVSESEQSKKRSSSSPRPFRDANSAKSKSKSPTWSKDSDCEQSKSVEVKKTEEESLQQVQSGSSSEMEEGELEPEPQPEPVLPSGEDLPSVTLETDEKQVQNENENECRPDGDTDAVMEERQELSSKEEVKPDEEVGCEVKDAEKEVDKLPDVQDDPTEEMVVTETDVGSVGNGDGDREECLDAGGAECEEEEAKKDADLEKEKVVLLNEEEQKQDKAVGQETSMDVVKPESNDEVSTGNETPKHVDRETMMEGLINNVKDKGKGVSVAFVPTDVAHSAEDGLWIDRGSRDFPTCSVDVIEGPSTRGFELFSRSPVRKVEKVDHSVLNDHKDDMEQLDLTLSLPNVLLPIGAHETTSQAPGSPSQARSVQSLSNTFCTNSDGFTASMSFSGSQSLYHNPSCSLTKNSVDYEQSVGSRPLFQGIDWQGLSQSDPKQKEVPFGQRTSANGNGSLYQSQASWGALDSQAVKGQHSRVLEGSSKMGGGIDRQLSFHKQFSGQSRRLDDVRSPSQSVGSHDIGSNYSFEKKREVRDRSTGSLYRTTSQKEQEQLLMGGVDFVETNIARIVSEPVHAMSRKFHEMTGQSLVSLKEGIREIMLNADKHGQILAFQKVLQNRSDIVLDVLLKCHRVQLEILVALKTGLTHFLHLDNSISSSELAQIFLNLRCKNLSCRSQLPVDECDCKVCAQKNGFCRECMCLVCSKFDNASNTCSWVGCDVCLHWCHTDCGLRESYIRNGHGTKGMTEMQFHCIACDHPSEMFGFVKEVFHNFAKDWSVEALCKELEYVKRIFSASKDMRGRQLYEIAEQMLPRLANKSNLHEVLRHITSFLTNGDPSKLPTTTNFSGKEQIKENNGVAGPSQEVAWMKSIYSEKPPLLERPANILPSFGQNDKRTFGQELQMSSIQKDFCFDELESIVKVKQAEAKMFQSRADDARREAEGLKRIAVAKSEKIEEEYANRIAKLRLTETDEIRKQKFEELQTLERAHMEYLNMKRRMETDIKDLLSKMEATKMSLAM
SIO_010081: LOC109798336
subclass of: SO_0000673
so part of: LOC109798336
location: join(664635..667013,667161..667782,668718..669274)
location: region:664635-669274:1
so has part: feature:664635-667013:1:exon
so has part: feature:667161-667782:1:exon
so has part: feature:668718-669274:1:exon

XP_029127084.1
type: Protein
SIO_000068: ncbiprotein

position:664635:1
position: 664635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:669274:1
position: 669274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:664635-667013:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:667161-667782:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:668718-669274:1:exon

LOC109798282
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798282
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 675395..677486
location: region:675395-677486:1
so has part: feature:675395-677486:1:exon
subclass of: SO_0000010

109798282
type: Gene
SIO_000068: ncbigene

position:675395:1
position: 675395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:677486:1
position: 677486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:675395-677486:1:exon

LOC109798282
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798282
product: uncharacterized LOC109798282
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_020358491.2
SIO_010081: LOC109798282
subclass of: SO_0000673
so part of: LOC109798282
location: join(675395..675604,675749..676243,676759..677486)
location: region:675395-677486:1
so has part: feature:675395-675604:1:exon
so has part: feature:675749-676243:1:exon
so has part: feature:676759-677486:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:675395-675604:1:exon

position:675604:1
position: 675604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:675749-676243:1:exon

position:675749:1
position: 675749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:676243:1
position: 676243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:676759-677486:1:exon

position:676759:1
position: 676759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109798282
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798282
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109798282
translation: MAATFIFTLSLAMLCAASAFAAVHRRVPETYLRNGNFEERPDPRNLKKSTLIGKHALPKWEINGHVEYVSGGPQPGGMFFPVSHGEHAVRLGNEASISQTIRVKPGMWYSLILGASRTCAQDEVLRISVPPQSGDVPLQTLYSLNGDVIAWGFRATSNVAKVTLHNPGIQEDPACGPLVDAVAIAQFYPPRPTRANLVKNPGFEEGPFPIFNSTHGVLLPPKQEDRMSPLPGWMIESLKAVKFIDSEHFTVPFGQGAIELIAGRESVIAQILRTVPNKVYNMKFTIGDARNGCHGSMMVEAFAAKDTLKVPFKSVGKGHFKTVSFKFKAIENRTRITFYSSFYHTKIHDYGSLCGPVVDQVIVHPVA
SIO_010081: LOC109798282
subclass of: SO_0000673
so part of: LOC109798282
location: join(675517..675604,675749..676243,676759..677279)
location: region:675517-677279:1
so has part: feature:675517-675604:1:exon
so has part: feature:675749-676243:1:exon
so has part: feature:676759-677279:1:exon

XP_020214080.1
type: Protein
SIO_000068: ncbiprotein

position:675517:1
position: 675517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:677279:1
position: 677279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:675517-675604:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:675749-676243:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:676759-677279:1:exon

LOC114915906
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC114915906
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(676628..679887)
location: region:676628-679887:-1
so has part: feature:676628-679887:-1:exon
subclass of: SO_0000011

114915906
type: Gene
SIO_000068: ncbigene

position:676628:-1
position: 676628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:679887:-1
position: 679887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:676628-679887:-1:exon

LOC114915906
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3821
nc RNA class: lncRNA
gene: LOC114915906
product: uncharacterized LOC114915906
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_003804114.1
SIO_010081: LOC114915906
subclass of: SO_0000673
so part of: LOC114915906
location: complement(join(676628..677875,678408..679887))
location: region:676628-679887:-1
so has part: feature:678408-679887:-1:exon
so has part: feature:676628-677875:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:678408-679887:-1:exon

position:678408:-1
position: 678408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:676628-677875:-1:exon

position:677875:-1
position: 677875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109798353
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798353
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(684378..694035)
location: region:684378-694035:-1
so has part: feature:684378-694035:-1:exon
subclass of: SO_0000010

109798353
type: Gene
SIO_000068: ncbigene

position:684378:-1
position: 684378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694035:-1
position: 694035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:684378-694035:-1:exon

LOC109798353
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798353
product: uncharacterized LOC109798353, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_020358583.2
SIO_010081: LOC109798353
subclass of: SO_0000673
so part of: LOC109798353
location: complement(join(684378..684606,684734..684809,685343..685388,685554..685621,686751..686846,687532..687659,687870..687934,688119..688224,689178..689246,690119..690180,690923..690995,692292..692344,692529..692582,692705..692754,693527..693604,693845..694035))
location: region:684378-694035:-1
so has part: feature:693845-694035:-1:exon
so has part: feature:693527-693604:-1:exon
so has part: feature:692705-692754:-1:exon
so has part: feature:692529-692582:-1:exon
so has part: feature:692292-692344:-1:exon
so has part: feature:690923-690995:-1:exon
so has part: feature:690119-690180:-1:exon
so has part: feature:689178-689246:-1:exon
so has part: feature:688119-688224:-1:exon
so has part: feature:687870-687934:-1:exon
so has part: feature:687532-687659:-1:exon
so has part: feature:686751-686846:-1:exon
so has part: feature:685554-685621:-1:exon
so has part: feature:685343-685388:-1:exon
so has part: feature:684734-684809:-1:exon
so has part: feature:684378-684606:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:693845-694035:-1:exon

position:693845:-1
position: 693845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:693527-693604:-1:exon

position:693527:-1
position: 693527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:693604:-1
position: 693604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:692705-692754:-1:exon

position:692705:-1
position: 692705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:692754:-1
position: 692754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:692529-692582:-1:exon

position:692529:-1
position: 692529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:692582:-1
position: 692582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:692292-692344:-1:exon

position:692292:-1
position: 692292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:692344:-1
position: 692344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:690923-690995:-1:exon

position:690923:-1
position: 690923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:690995:-1
position: 690995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:690119-690180:-1:exon

position:690119:-1
position: 690119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:690180:-1
position: 690180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:689178-689246:-1:exon

position:689178:-1
position: 689178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:689246:-1
position: 689246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:688119-688224:-1:exon

position:688119:-1
position: 688119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:688224:-1
position: 688224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:687870-687934:-1:exon

position:687870:-1
position: 687870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:687934:-1
position: 687934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:687532-687659:-1:exon

position:687532:-1
position: 687532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:687659:-1
position: 687659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:686751-686846:-1:exon

position:686751:-1
position: 686751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:686846:-1
position: 686846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:685554-685621:-1:exon

position:685554:-1
position: 685554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685621:-1
position: 685621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:685343-685388:-1:exon

position:685343:-1
position: 685343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685388:-1
position: 685388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:684734-684809:-1:exon

position:684734:-1
position: 684734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684809:-1
position: 684809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:684378-684606:-1:exon

position:684606:-1
position: 684606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109798353
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798353
product: uncharacterized LOC109798353, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_020358584.2
SIO_010081: LOC109798353
subclass of: SO_0000673
so part of: LOC109798353
location: complement(join(684378..684606,684734..684809,685343..685388,685554..685621,686751..686846,687559..687659,687870..687934,688119..688224,689178..689246,690119..690180,690923..690995,692292..692344,692529..692582,692705..692754,693527..693604,693845..694034))
location: region:684378-694034:-1
so has part: feature:693845-694034:-1:exon
so has part: feature:693527-693604:-1:exon
so has part: feature:692705-692754:-1:exon
so has part: feature:692529-692582:-1:exon
so has part: feature:692292-692344:-1:exon
so has part: feature:690923-690995:-1:exon
so has part: feature:690119-690180:-1:exon
so has part: feature:689178-689246:-1:exon
so has part: feature:688119-688224:-1:exon
so has part: feature:687870-687934:-1:exon
so has part: feature:687559-687659:-1:exon
so has part: feature:686751-686846:-1:exon
so has part: feature:685554-685621:-1:exon
so has part: feature:685343-685388:-1:exon
so has part: feature:684734-684809:-1:exon
so has part: feature:684378-684606:-1:exon

position:694034:-1
position: 694034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:693845-694034:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:693527-693604:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:692705-692754:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:692529-692582:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:692292-692344:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:690923-690995:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:690119-690180:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:689178-689246:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:688119-688224:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:687870-687934:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:687559-687659:-1:exon

position:687559:-1
position: 687559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:686751-686846:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:685554-685621:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:685343-685388:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:684734-684809:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:684378-684606:-1:exon

LOC109798353
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798353
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109798353 isoform X2
translation: MNMQTLSLFGFPRPISQHGVVPAHAMSYSSQTSIPYLTTTSISFTQLQDKNADLSSKIEQGFGPNGLGILSVTDVPGYSSLRRNLLHLAPRLANLPKEVKEELEDPHSRYNFGWSHGKEKLESGKPDILKGSFYANPILDTPTTEASLIQRYPSYCGSNIWPKNALPELEEAFKALGKLIFEVGLMLAYHCDQYVSKGMKIHKDEGLESILRRSRCHKGRLLYYFPSQQGIPDGNSLSSWCGWHTDHGSLTGLTCGIFTRDGVEIVCPDSGAGLYIRTRNDQIVKVVYGEDDIAYQIGETTEILSGGYLCATPHCVQAAKGEESYGIERSTFALFMQPDWDEKLKFPDEVHIHKELIPSNAVLTFGEYSEMLLDKYYH
SIO_010081: LOC109798353
subclass of: SO_0000673
so part of: LOC109798353
location: complement(join(684738..684809,685343..685388,685554..685621,686751..686846,687559..687659,687870..687934,688119..688224,689178..689246,690119..690180,690923..690995,692292..692344,692529..692582,692705..692754,693527..693604,693845..693988))
location: region:684738-693988:-1
so has part: feature:693845-693988:-1:exon
so has part: feature:693527-693604:-1:exon
so has part: feature:692705-692754:-1:exon
so has part: feature:692529-692582:-1:exon
so has part: feature:692292-692344:-1:exon
so has part: feature:690923-690995:-1:exon
so has part: feature:690119-690180:-1:exon
so has part: feature:689178-689246:-1:exon
so has part: feature:688119-688224:-1:exon
so has part: feature:687870-687934:-1:exon
so has part: feature:687559-687659:-1:exon
so has part: feature:686751-686846:-1:exon
so has part: feature:685554-685621:-1:exon
so has part: feature:685343-685388:-1:exon
so has part: feature:684738-684809:-1:exon

XP_020214173.1
type: Protein
SIO_000068: ncbiprotein

position:684738:-1
position: 684738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:693988:-1
position: 693988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:693845-693988:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:693527-693604:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:692705-692754:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:692529-692582:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:692292-692344:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:690923-690995:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:690119-690180:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:689178-689246:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:688119-688224:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:687870-687934:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:687559-687659:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:686751-686846:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:685554-685621:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:685343-685388:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:684738-684809:-1:exon

LOC109798353
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798353
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109798353 isoform X1
translation: MNMQTLSLFGFPRPISQHGVVPAHAMSYSSQTSIPYLTTTSISFTQLQDKNADLSSKIEQGFGPNGLGILSVTDVPGYSSLRRNLLHLAPRLANLPKEVKEELEDPHSRYNFGWSHGKEKLESGKPDILKGSFYANPILDTPTTEASLIQRYPSYCGSNIWPKNALPELEEAFKALGKLIFEVGLMLAYHCDQYVSKGMKIHKDEGLESILRRSRCHKGRLLYYFPSQQGIPDGNSLSSWCGWHTDHGSLTGLTCGIFTRDGVEIVCPDSGAGLYIRTRNDQIVKVYMRLLEIQVVYGEDDIAYQIGETTEILSGGYLCATPHCVQAAKGEESYGIERSTFALFMQPDWDEKLKFPDEVHIHKELIPSNAVLTFGEYSEMLLDKYYH
SIO_010081: LOC109798353
subclass of: SO_0000673
so part of: LOC109798353
location: complement(join(684738..684809,685343..685388,685554..685621,686751..686846,687532..687659,687870..687934,688119..688224,689178..689246,690119..690180,690923..690995,692292..692344,692529..692582,692705..692754,693527..693604,693845..693988))
location: region:684738-693988:-1
so has part: feature:693845-693988:-1:exon
so has part: feature:693527-693604:-1:exon
so has part: feature:692705-692754:-1:exon
so has part: feature:692529-692582:-1:exon
so has part: feature:692292-692344:-1:exon
so has part: feature:690923-690995:-1:exon
so has part: feature:690119-690180:-1:exon
so has part: feature:689178-689246:-1:exon
so has part: feature:688119-688224:-1:exon
so has part: feature:687870-687934:-1:exon
so has part: feature:687532-687659:-1:exon
so has part: feature:686751-686846:-1:exon
so has part: feature:685554-685621:-1:exon
so has part: feature:685343-685388:-1:exon
so has part: feature:684738-684809:-1:exon

XP_020214172.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:693845-693988:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:693527-693604:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:692705-692754:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:692529-692582:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:692292-692344:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:690923-690995:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:690119-690180:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:689178-689246:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:688119-688224:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:687870-687934:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:687532-687659:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:686751-686846:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:685554-685621:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:685343-685388:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:684738-684809:-1:exon

LOC109799164
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109799164
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 701933..706648
location: region:701933-706648:1
so has part: feature:701933-706648:1:exon
subclass of: SO_0000010

109799164
type: Gene
SIO_000068: ncbigene

position:701933:1
position: 701933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:706648:1
position: 706648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:701933-706648:1:exon

LOC109799164
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109799164
product: uncharacterized LOC109799164, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_020359697.2
SIO_010081: LOC109799164
subclass of: SO_0000673
so part of: LOC109799164
location: join(701933..702037,702166..702328,703737..703830,704435..704634,704988..706648)
location: region:701933-706648:1
so has part: feature:701933-702037:1:exon
so has part: feature:702166-702328:1:exon
so has part: feature:703737-703830:1:exon
so has part: feature:704435-704634:1:exon
so has part: feature:704988-706648:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:701933-702037:1:exon

position:702037:1
position: 702037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:702166-702328:1:exon

position:702166:1
position: 702166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:702328:1
position: 702328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:703737-703830:1:exon

position:703737:1
position: 703737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:703830:1
position: 703830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:704435-704634:1:exon

position:704435:1
position: 704435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:704634:1
position: 704634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:704988-706648:1:exon

position:704988:1
position: 704988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109799164
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109799164
product: uncharacterized LOC109799164, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_020359696.2
SIO_010081: LOC109799164
subclass of: SO_0000673
so part of: LOC109799164
location: join(701933..702037,702166..702328,703737..703830,704435..704634,705037..706648)
location: region:701933-706648:1
so has part: feature:701933-702037:1:exon
so has part: feature:702166-702328:1:exon
so has part: feature:703737-703830:1:exon
so has part: feature:704435-704634:1:exon
so has part: feature:705037-706648:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:701933-702037:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:702166-702328:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:703737-703830:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:704435-704634:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:705037-706648:1:exon

position:705037:1
position: 705037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109799164
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109799164
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109799164 isoform X1
translation: MEDSGAILAHISSLKEMLDQVNEEIEANIQITREIESSIVKCEEIEADFATREAELIKTSAMLQFDTVGYVTVAADFRASVSTLEKELCCLKMKRDEMVNKMNEKRENFTTLCLEFQREIDKREDCEVRTVLSEKDSLENEIQLLEKKNNVFKNSVLAFVEEILEDLHSSNSALEVQILRSNWENEKLLKDINDLKTTLLSAIGTSDDIL
SIO_010081: LOC109799164
subclass of: SO_0000673
so part of: LOC109799164
location: join(701978..702037,702166..702328,703737..703830,704435..704634,705037..705152)
location: region:701978-705152:1
so has part: feature:701978-702037:1:exon
so has part: feature:702166-702328:1:exon
so has part: feature:703737-703830:1:exon
so has part: feature:704435-704634:1:exon
so has part: feature:705037-705152:1:exon

XP_020215285.1
type: Protein
SIO_000068: ncbiprotein

position:701978:1
position: 701978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:705152:1
position: 705152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:701978-702037:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:702166-702328:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:703737-703830:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:704435-704634:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:705037-705152:1:exon

LOC109799164
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109799164
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109799164 isoform X2
translation: MEDSGAILAHISSLKEMLDQVNEEIEANIQITREIESSIVKCEEIEADFATREAELIKTSAMLQFDTVGYVTVAADFRASVSTLEKELCCLKMKRDEMVNKMNEKRENFTTLCLEFQREIDKREDCEVRTVLSEKDSLENEIQLLEKKNNVFKNSVLAFVEEILEDLHSSNSVMFCNLSNSLPHDPYCSIRSSDTEE
SIO_010081: LOC109799164
subclass of: SO_0000673
so part of: LOC109799164
location: join(701978..702037,702166..702328,703737..703830,704435..704634,704988..705064)
location: region:701978-705064:1
so has part: feature:701978-702037:1:exon
so has part: feature:702166-702328:1:exon
so has part: feature:703737-703830:1:exon
so has part: feature:704435-704634:1:exon
so has part: feature:704988-705064:1:exon

XP_020215286.1
type: Protein
SIO_000068: ncbiprotein

position:705064:1
position: 705064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:701978-702037:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:702166-702328:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:703737-703830:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:704435-704634:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:704988-705064:1:exon

LOC109799147
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109799147
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 715995..720202
location: region:715995-720202:1
so has part: feature:715995-720202:1:exon
subclass of: SO_0000010

109799147
type: Gene
SIO_000068: ncbigene

position:715995:1
position: 715995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:720202:1
position: 720202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:715995-720202:1:exon

LOC109799147
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109799147
product: cycloartenol-C-24-methyltransferase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_029271409.1
SIO_010081: LOC109799147
subclass of: SO_0000673
so part of: LOC109799147
location: join(715995..716123,716495..716561,717025..717098,717190..717274,717354..717409,717936..717990,718193..718240,718479..718562,718812..718928,719035..719118,719219..719344,719452..719549,719857..720202)
location: region:715995-720202:1
so has part: feature:715995-716123:1:exon
so has part: feature:716495-716561:1:exon
so has part: feature:717025-717098:1:exon
so has part: feature:717190-717274:1:exon
so has part: feature:717354-717409:1:exon
so has part: feature:717936-717990:1:exon
so has part: feature:718193-718240:1:exon
so has part: feature:718479-718562:1:exon
so has part: feature:718812-718928:1:exon
so has part: feature:719035-719118:1:exon
so has part: feature:719219-719344:1:exon
so has part: feature:719452-719549:1:exon
so has part: feature:719857-720202:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:715995-716123:1:exon

position:716123:1
position: 716123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:716495-716561:1:exon

position:716495:1
position: 716495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:716561:1
position: 716561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:717025-717098:1:exon

position:717025:1
position: 717025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:717098:1
position: 717098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:717190-717274:1:exon

position:717190:1
position: 717190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:717274:1
position: 717274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:717354-717409:1:exon

position:717354:1
position: 717354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:717409:1
position: 717409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:717936-717990:1:exon

position:717936:1
position: 717936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:717990:1
position: 717990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:718193-718240:1:exon

position:718193:1
position: 718193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:718240:1
position: 718240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:718479-718562:1:exon

position:718479:1
position: 718479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:718562:1
position: 718562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:718812-718928:1:exon

position:718812:1
position: 718812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:718928:1
position: 718928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:719035-719118:1:exon

position:719035:1
position: 719035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:719118:1
position: 719118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:719219-719344:1:exon

position:719219:1
position: 719219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:719344:1
position: 719344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:719452-719549:1:exon

position:719452:1
position: 719452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:719549:1
position: 719549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:719857-720202:1:exon

position:719857:1
position: 719857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109799147
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109799147
product: cycloartenol-C-24-methyltransferase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_020359675.2
SIO_010081: LOC109799147
subclass of: SO_0000673
so part of: LOC109799147
location: join(715996..716123,716210..716309,716495..716561,717025..717098,717190..717274,717354..717409,717936..717990,718193..718240,718479..718562,718812..718928,719035..719118,719219..719344,719452..719549,719857..720202)
location: region:715996-720202:1
so has part: feature:715996-716123:1:exon
so has part: feature:716210-716309:1:exon
so has part: feature:716495-716561:1:exon
so has part: feature:717025-717098:1:exon
so has part: feature:717190-717274:1:exon
so has part: feature:717354-717409:1:exon
so has part: feature:717936-717990:1:exon
so has part: feature:718193-718240:1:exon
so has part: feature:718479-718562:1:exon
so has part: feature:718812-718928:1:exon
so has part: feature:719035-719118:1:exon
so has part: feature:719219-719344:1:exon
so has part: feature:719452-719549:1:exon
so has part: feature:719857-720202:1:exon

position:715996:1
position: 715996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:715996-716123:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:716210-716309:1:exon

position:716210:1
position: 716210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:716309:1
position: 716309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:716495-716561:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:717025-717098:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:717190-717274:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:717354-717409:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:717936-717990:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:718193-718240:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:718479-718562:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:718812-718928:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:719035-719118:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:719219-719344:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:719452-719549:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:719857-720202:1:exon

LOC109799147
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109799147
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cycloartenol-C-24-methyltransferase isoform X2
translation: MYEKYHVYYGGQEEERKANYTDMVNKYYDLSTSFYEYGWGQSFHFAPRWKGESLQESLKRHEHFLALQLGLKPGQKVLDVGCGIGGPLREISRFSSTSITGLNNNEYQITRAKELNRITGVDKTCHLVKADFMKMPFSDNSFDAVYAIEATCHAPDAYGCYKEIFRVLKPGQYFAAYEWCMTRAFDPNNKDHQRIKAEIEIGDGLPDIRLTSKCAEALNQAGFEVLWEKDLAIDSPVPWYDPLDTSRFSLNTFRLTALGRFFTRSLVKSLEFVGLAPRGSLRVQEFLEKAGDGLVEGGKKEIFTPMYFFLARKPDYNI
SIO_010081: LOC109799147
subclass of: SO_0000673
so part of: LOC109799147
location: join(716122..716123,716495..716561,717025..717098,717190..717274,717354..717409,717936..717990,718193..718240,718479..718562,718812..718928,719035..719118,719219..719344,719452..719549,719857..719917)
location: region:716122-719917:1
so has part: feature:716122-716123:1:exon
so has part: feature:716495-716561:1:exon
so has part: feature:717025-717098:1:exon
so has part: feature:717190-717274:1:exon
so has part: feature:717354-717409:1:exon
so has part: feature:717936-717990:1:exon
so has part: feature:718193-718240:1:exon
so has part: feature:718479-718562:1:exon
so has part: feature:718812-718928:1:exon
so has part: feature:719035-719118:1:exon
so has part: feature:719219-719344:1:exon
so has part: feature:719452-719549:1:exon
so has part: feature:719857-719917:1:exon

XP_029127242.1
type: Protein
SIO_000068: ncbiprotein

position:716122:1
position: 716122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:719917:1
position: 719917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:716122-716123:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:716495-716561:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:717025-717098:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:717190-717274:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:717354-717409:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:717936-717990:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:718193-718240:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:718479-718562:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:718812-718928:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:719035-719118:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:719219-719344:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:719452-719549:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:719857-719917:1:exon

LOC109799147
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109799147
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cycloartenol-C-24-methyltransferase isoform X1
translation: MNLASGVGGKIDKSQILSAVEEYEKYHVYYGGQEEERKANYTDMVNKYYDLSTSFYEYGWGQSFHFAPRWKGESLQESLKRHEHFLALQLGLKPGQKVLDVGCGIGGPLREISRFSSTSITGLNNNEYQITRAKELNRITGVDKTCHLVKADFMKMPFSDNSFDAVYAIEATCHAPDAYGCYKEIFRVLKPGQYFAAYEWCMTRAFDPNNKDHQRIKAEIEIGDGLPDIRLTSKCAEALNQAGFEVLWEKDLAIDSPVPWYDPLDTSRFSLNTFRLTALGRFFTRSLVKSLEFVGLAPRGSLRVQEFLEKAGDGLVEGGKKEIFTPMYFFLARKPDYNI
SIO_010081: LOC109799147
subclass of: SO_0000673
so part of: LOC109799147
location: join(716245..716309,716495..716561,717025..717098,717190..717274,717354..717409,717936..717990,718193..718240,718479..718562,718812..718928,719035..719118,719219..719344,719452..719549,719857..719917)
location: region:716245-719917:1
so has part: feature:716245-716309:1:exon
so has part: feature:716495-716561:1:exon
so has part: feature:717025-717098:1:exon
so has part: feature:717190-717274:1:exon
so has part: feature:717354-717409:1:exon
so has part: feature:717936-717990:1:exon
so has part: feature:718193-718240:1:exon
so has part: feature:718479-718562:1:exon
so has part: feature:718812-718928:1:exon
so has part: feature:719035-719118:1:exon
so has part: feature:719219-719344:1:exon
so has part: feature:719452-719549:1:exon
so has part: feature:719857-719917:1:exon

XP_020215264.1
type: Protein
SIO_000068: ncbiprotein

position:716245:1
position: 716245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:716245-716309:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:716495-716561:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:717025-717098:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:717190-717274:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:717354-717409:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:717936-717990:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:718193-718240:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:718479-718562:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:718812-718928:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:719035-719118:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:719219-719344:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:719452-719549:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:719857-719917:1:exon

TRNAR-UCU
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: TRNAR-UCU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 722318..722390
location: region:722318-722390:1
so has part: feature:722318-722390:1:exon
subclass of: SO_0000663

109799329
type: Gene
SIO_000068: ncbigene

position:722318:1
position: 722318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:722390:1
position: 722390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:722318-722390:1:exon

TRNAR-UCU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3821
gene: TRNAR-UCU
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA arginine (anticodon UCU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:722351..722353,aa:Arg,seq:tct)
SIO_010081: TRNAR-UCU
subclass of: SO_0000673
so part of: TRNAR-UCU
location: 722318..722390
location: region:722318-722390:1
so has part: feature:722318-722390:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:722318-722390:1:exon

LOC109798463
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798463
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 730462..752078
location: region:730462-752078:1
so has part: feature:730462-752078:1:exon
subclass of: SO_0000010

109798463
type: Gene
SIO_000068: ncbigene

position:730462:1
position: 730462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:752078:1
position: 752078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:730462-752078:1:exon

LOC109798463
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798463
product: polyamine oxidase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_020358771.2
SIO_010081: LOC109798463
subclass of: SO_0000673
so part of: LOC109798463
location: join(730462..730606,730699..730948,731203..731337,731474..731526,731669..731823,746289..746432,748622..748771,750203..750457,751375..751456,751633..752078)
location: region:730462-752078:1
so has part: feature:730462-730606:1:exon
so has part: feature:730699-730948:1:exon
so has part: feature:731203-731337:1:exon
so has part: feature:731474-731526:1:exon
so has part: feature:731669-731823:1:exon
so has part: feature:746289-746432:1:exon
so has part: feature:748622-748771:1:exon
so has part: feature:750203-750457:1:exon
so has part: feature:751375-751456:1:exon
so has part: feature:751633-752078:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:730462-730606:1:exon

position:730606:1
position: 730606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:730699-730948:1:exon

position:730699:1
position: 730699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:730948:1
position: 730948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:731203-731337:1:exon

position:731203:1
position: 731203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:731337:1
position: 731337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:731474-731526:1:exon

position:731474:1
position: 731474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:731526:1
position: 731526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:731669-731823:1:exon

position:731669:1
position: 731669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:731823:1
position: 731823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:746289-746432:1:exon

position:746289:1
position: 746289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:746432:1
position: 746432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:748622-748771:1:exon

position:748622:1
position: 748622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:748771:1
position: 748771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:750203-750457:1:exon

position:750203:1
position: 750203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:750457:1
position: 750457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:751375-751456:1:exon

position:751375:1
position: 751375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:751456:1
position: 751456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:751633-752078:1:exon

position:751633:1
position: 751633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109798463
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798463
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyamine oxidase 1
translation: MDSPSRSSVIIVGAGVSGISAAKVLAENGVKDIVILEASDRIGGRIRKENFGGFSVELGAGWIVGVGGKESNPVWELAAESGLRTCFSDYSNARYNIYDRSGKIFPSEIAADSYRKAVNSAIQNLNNQETDRRADSSKITESESPLTPLELAIDFILHDFEMAEVEPISTFTDFGEREYLVADERGYDYLLYKIAEDFLFTSEGRIMDSRLKLNQVVREIQHSGSGVTVITEDDCIYEANYVILSVSIGVLQSDLVAFNPPLPIWKLKAIQKCDVMVYTKIFLKFPYKFWPIGPGKEFFIYAHEQRGYYTFWQQMENAYPGSNILVVTLTNGESKRVEAQSDENTLREAMEVLRDIFGSNIPDAIDILVPRWWNDRFQRGSYSNYPIISNPQVVRDMKAPVGRVFFTGEHTSERFNGYVHGGYLAGIDSSKELLEEMRKDDRENESKTLLLEPMLALTECKIPGQLYLRGKLGMAEAKL
SIO_010081: LOC109798463
subclass of: SO_0000673
so part of: LOC109798463
location: join(730555..730606,730699..730948,731203..731337,731474..731526,731669..731823,746289..746432,748622..748771,750203..750457,751375..751456,751633..751796)
location: region:730555-751796:1
so has part: feature:730555-730606:1:exon
so has part: feature:730699-730948:1:exon
so has part: feature:731203-731337:1:exon
so has part: feature:731474-731526:1:exon
so has part: feature:731669-731823:1:exon
so has part: feature:746289-746432:1:exon
so has part: feature:748622-748771:1:exon
so has part: feature:750203-750457:1:exon
so has part: feature:751375-751456:1:exon
so has part: feature:751633-751796:1:exon

XP_020214360.1
type: Protein
SIO_000068: ncbiprotein

position:730555:1
position: 730555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:751796:1
position: 751796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:730555-730606:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:730699-730948:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:731203-731337:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:731474-731526:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:731669-731823:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:746289-746432:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:748622-748771:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:750203-750457:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:751375-751456:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:751633-751796:1:exon

LOC109798464
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798464
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(751480..757106)
location: region:751480-757106:-1
so has part: feature:751480-757106:-1:exon
subclass of: SO_0000010

109798464
type: Gene
SIO_000068: ncbigene

position:751480:-1
position: 751480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:757106:-1
position: 757106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:751480-757106:-1:exon

LOC109798464
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 3821
gene: LOC109798464
product: aminoacyl tRNA synthase complex-interacting multifunctional protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XR_002239787.2
SIO_010081: LOC109798464
so part of: LOC109798464
location: complement(join(751480..752322,752918..753112,753994..754200,756696..757106))
location: region:751480-757106:-1
so has part: feature:756696-757106:-1:exon
so has part: feature:753994-754200:-1:exon
so has part: feature:752918-753112:-1:exon
so has part: feature:751480-752322:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:756696-757106:-1:exon

position:756696:-1
position: 756696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:753994-754200:-1:exon

position:753994:-1
position: 753994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:754200:-1
position: 754200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:752918-753112:-1:exon

position:752918:-1
position: 752918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:753112:-1
position: 753112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:751480-752322:-1:exon

position:752322:-1
position: 752322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109798464
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 3821
gene: LOC109798464
product: aminoacyl tRNA synthase complex-interacting multifunctional protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XR_002239786.2
SIO_010081: LOC109798464
so part of: LOC109798464
location: complement(join(751480..752346,752918..753112,753994..754200,756696..757106))
location: region:751480-757106:-1
so has part: feature:756696-757106:-1:exon
so has part: feature:753994-754200:-1:exon
so has part: feature:752918-753112:-1:exon
so has part: feature:751480-752346:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:756696-757106:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:753994-754200:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:752918-753112:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:751480-752346:-1:exon

position:752346:-1
position: 752346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109798464
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798464
product: aminoacyl tRNA synthase complex-interacting multifunctional protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_020358772.2
SIO_010081: LOC109798464
subclass of: SO_0000673
so part of: LOC109798464
location: complement(join(752645..753112,753994..754200,756696..757106))
location: region:752645-757106:-1
so has part: feature:756696-757106:-1:exon
so has part: feature:753994-754200:-1:exon
so has part: feature:752645-753112:-1:exon

position:752645:-1
position: 752645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:756696-757106:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:753994-754200:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:752645-753112:-1:exon

LOC109798464
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798464
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aminoacyl tRNA synthase complex-interacting multifunctional protein 1
translation: MAKALRVGSVISLCSLRNTTPHFPLLSHATRFRSKFPFFSLSSSPNPSGSPSFCTLSSSSSSSSVSTDEAVTSNNGEAENNVKDAAGLLDIRVGRILRAWKHDEADSLYVEEVDIGEPEPRIICSGLVKYIPLEHLQGKKVIVLSNLKPRNMRGVKSSGMLMAASDAKHENVELLFPPEEATTGERIWFGTEDEKDNQPAAATPNQIQKKKIWELVQPHLKTDVSCTAMLGEHVMRTSVGSVACQSLQKANIS
SIO_010081: LOC109798464
subclass of: SO_0000673
so part of: LOC109798464
location: complement(join(752969..753112,753994..754200,756696..757106))
location: region:752969-757106:-1
so has part: feature:756696-757106:-1:exon
so has part: feature:753994-754200:-1:exon
so has part: feature:752969-753112:-1:exon

XP_020214361.1
type: Protein
SIO_000068: ncbiprotein

position:752969:-1
position: 752969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:756696-757106:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:753994-754200:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:752969-753112:-1:exon

TRNAG-UCC
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: TRNAG-UCC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(759164..759235)
location: region:759164-759235:-1
so has part: feature:759164-759235:-1:exon
subclass of: SO_0000663

109799323
type: Gene
SIO_000068: ncbigene

position:759164:-1
position: 759164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:759235:-1
position: 759235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:759164-759235:-1:exon

TRNAG-UCC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3821
gene: TRNAG-UCC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon UCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(759200..759202),aa:Gly,seq:tcc)
SIO_010081: TRNAG-UCC
subclass of: SO_0000673
so part of: TRNAG-UCC
location: complement(759164..759235)
location: region:759164-759235:-1
so has part: feature:759164-759235:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:759164-759235:-1:exon

LOC109798765
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798765
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(760015..765092)
location: region:760015-765092:-1
so has part: feature:760015-765092:-1:exon
subclass of: SO_0000010

109798765
type: Gene
SIO_000068: ncbigene

position:760015:-1
position: 760015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:765092:-1
position: 765092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:760015-765092:-1:exon

LOC109798765
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798765
product: uncharacterized GPI-anchored protein At1g61900, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_029271252.1
SIO_010081: LOC109798765
subclass of: SO_0000673
so part of: LOC109798765
location: complement(join(760015..760689,760938..760985,761126..761269,761791..762036,762619..763488,763769..763951,764801..765092))
location: region:760015-765092:-1
so has part: feature:764801-765092:-1:exon
so has part: feature:763769-763951:-1:exon
so has part: feature:762619-763488:-1:exon
so has part: feature:761791-762036:-1:exon
so has part: feature:761126-761269:-1:exon
so has part: feature:760938-760985:-1:exon
so has part: feature:760015-760689:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:764801-765092:-1:exon

position:764801:-1
position: 764801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:763769-763951:-1:exon

position:763769:-1
position: 763769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:763951:-1
position: 763951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:762619-763488:-1:exon

position:762619:-1
position: 762619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:763488:-1
position: 763488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:761791-762036:-1:exon

position:761791:-1
position: 761791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:762036:-1
position: 762036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:761126-761269:-1:exon

position:761126:-1
position: 761126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:761269:-1
position: 761269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:760938-760985:-1:exon

position:760938:-1
position: 760938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:760985:-1
position: 760985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:760015-760689:-1:exon

position:760689:-1
position: 760689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109798765
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798765
product: uncharacterized GPI-anchored protein At1g61900, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_020359151.2
SIO_010081: LOC109798765
subclass of: SO_0000673
so part of: LOC109798765
location: complement(join(760015..760689,760938..760985,761126..761269,761671..761685,761791..762036,762619..763488,763769..763951,764801..765092))
location: region:760015-765092:-1
so has part: feature:764801-765092:-1:exon
so has part: feature:763769-763951:-1:exon
so has part: feature:762619-763488:-1:exon
so has part: feature:761791-762036:-1:exon
so has part: feature:761671-761685:-1:exon
so has part: feature:761126-761269:-1:exon
so has part: feature:760938-760985:-1:exon
so has part: feature:760015-760689:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:764801-765092:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:763769-763951:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:762619-763488:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:761791-762036:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:761671-761685:-1:exon

position:761671:-1
position: 761671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:761685:-1
position: 761685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:761126-761269:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:760938-760985:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:760015-760689:-1:exon

LOC109798765
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798765
product: uncharacterized GPI-anchored protein At1g61900, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_020359152.2
SIO_010081: LOC109798765
subclass of: SO_0000673
so part of: LOC109798765
location: complement(join(760616..760689,760938..760985,761126..761269,761671..761685,761791..762036,762619..763488,763769..763922,764801..765019))
location: region:760616-765019:-1
so has part: feature:764801-765019:-1:exon
so has part: feature:763769-763922:-1:exon
so has part: feature:762619-763488:-1:exon
so has part: feature:761791-762036:-1:exon
so has part: feature:761671-761685:-1:exon
so has part: feature:761126-761269:-1:exon
so has part: feature:760938-760985:-1:exon
so has part: feature:760616-760689:-1:exon

position:760616:-1
position: 760616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:765019:-1
position: 765019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:764801-765019:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:763769-763922:-1:exon

position:763922:-1
position: 763922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:762619-763488:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:761791-762036:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:761671-761685:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:761126-761269:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:760938-760985:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:760616-760689:-1:exon

LOC109798765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798765
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized GPI-anchored protein At1g61900 isoform X2
translation: MGCSQDANYFRGSLYCQLIIFFIWLLTFQDVTAQELHADVRKVSSLVELAKEPASGESGLFDPIEISPAVLPKFPYPTESLPPMYPTFPARYEPVLTGKCPVNFSHPDISNILDKTASDCTGPLAALVGNVICCPQFSSLIHIFQGFFSMKSDKLVLPNAVADHCYSDIISILASRGANSTIPTLCSIKSSNFTGGSCPVKDDSTFEKTVNTSKLLEACSTVDPLKECCRPVCQPAIMDAALQISGRQMMINNNENMAGEVNHTDYLNDCKGVVYSYISKKLSSEAANTAFRILSACKVNKVCPLTFNEPTEVINACQNVAAPSPSCCSSLNTYIAGIQKQMLITNKQAIICATLFGSMLRGGGVMTNIYQLCDVDLKDFSIQGCLLRSLPGDVIFDNSSGFSFTCDLSDNIPAPWPTSASPITSMSLCGPEMSLPALPTSQTFKNNSCNCGGVGLLVLIFSFFIFGTLFY
SIO_010081: LOC109798765
subclass of: SO_0000673
so part of: LOC109798765
location: complement(join(760616..760689,760938..760985,761126..761269,761791..762036,762619..763488,763769..763802))
location: region:760616-763802:-1
so has part: feature:763769-763802:-1:exon
so has part: feature:762619-763488:-1:exon
so has part: feature:761791-762036:-1:exon
so has part: feature:761126-761269:-1:exon
so has part: feature:760938-760985:-1:exon
so has part: feature:760616-760689:-1:exon

XP_029127085.1
type: Protein
SIO_000068: ncbiprotein

position:763802:-1
position: 763802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:763769-763802:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:762619-763488:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:761791-762036:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:761126-761269:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:760938-760985:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:760616-760689:-1:exon

LOC109798765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798765
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized GPI-anchored protein At1g61900 isoform X1
translation: MGCSQDANYFRGSLYCQLIIFFIWLLTFQDVTAQELHADVRKVSSLVELAKEPASGESGLFDPIEISPAVLPKFPYPTESLPPMYPTFPARYEPVLTGKCPVNFSHPDISNILDKTASDCTGPLAALVGNVICCPQFSSLIHIFQGFFSMKSDKLVLPNAVADHCYSDIISILASRGANSTIPTLCSIKSSNFTGGSCPVKDDSTFEKTVNTSKLLEACSTVDPLKECCRPVCQPAIMDAALQISGRQMMINNNENMAGEVNHTDYLNDCKGVVYSYISKKLSSEAANTAFRILSACKVNKVCPLTFNEPTEVINACQNVAAPSPSCCSSLNTYIAGIQKQMLITNKQAIICATLFGSMLRGGGVMTNIYQLCDVDLKDFSIQAYGQQGCLLRSLPGDVIFDNSSGFSFTCDLSDNIPAPWPTSASPITSMSLCGPEMSLPALPTSQTFKNNSCNCGGVGLLVLIFSFFIFGTLFY
SIO_010081: LOC109798765
subclass of: SO_0000673
so part of: LOC109798765
location: complement(join(760616..760689,760938..760985,761126..761269,761671..761685,761791..762036,762619..763488,763769..763802))
location: region:760616-763802:-1
so has part: feature:763769-763802:-1:exon
so has part: feature:762619-763488:-1:exon
so has part: feature:761791-762036:-1:exon
so has part: feature:761671-761685:-1:exon
so has part: feature:761126-761269:-1:exon
so has part: feature:760938-760985:-1:exon
so has part: feature:760616-760689:-1:exon

XP_020214740.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:763769-763802:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:762619-763488:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:761791-762036:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:761671-761685:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:761126-761269:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:760938-760985:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:760616-760689:-1:exon

LOC109798765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798765
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized GPI-anchored protein At1g61900 isoform X1
translation: MGCSQDANYFRGSLYCQLIIFFIWLLTFQDVTAQELHADVRKVSSLVELAKEPASGESGLFDPIEISPAVLPKFPYPTESLPPMYPTFPARYEPVLTGKCPVNFSHPDISNILDKTASDCTGPLAALVGNVICCPQFSSLIHIFQGFFSMKSDKLVLPNAVADHCYSDIISILASRGANSTIPTLCSIKSSNFTGGSCPVKDDSTFEKTVNTSKLLEACSTVDPLKECCRPVCQPAIMDAALQISGRQMMINNNENMAGEVNHTDYLNDCKGVVYSYISKKLSSEAANTAFRILSACKVNKVCPLTFNEPTEVINACQNVAAPSPSCCSSLNTYIAGIQKQMLITNKQAIICATLFGSMLRGGGVMTNIYQLCDVDLKDFSIQAYGQQGCLLRSLPGDVIFDNSSGFSFTCDLSDNIPAPWPTSASPITSMSLCGPEMSLPALPTSQTFKNNSCNCGGVGLLVLIFSFFIFGTLFY
SIO_010081: LOC109798765
subclass of: SO_0000673
so part of: LOC109798765
location: complement(join(760616..760689,760938..760985,761126..761269,761671..761685,761791..762036,762619..763488,763769..763802))
location: region:760616-763802:-1
so has part: feature:763769-763802:-1:exon
so has part: feature:762619-763488:-1:exon
so has part: feature:761791-762036:-1:exon
so has part: feature:761671-761685:-1:exon
so has part: feature:761126-761269:-1:exon
so has part: feature:760938-760985:-1:exon
so has part: feature:760616-760689:-1:exon

XP_020214741.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:763769-763802:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:762619-763488:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:761791-762036:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:761671-761685:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:761126-761269:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:760938-760985:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:760616-760689:-1:exon

LOC109798696
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798696
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(768642..773558)
location: region:768642-773558:-1
so has part: feature:768642-773558:-1:exon
subclass of: SO_0000010

109798696
type: Gene
SIO_000068: ncbigene

position:768642:-1
position: 768642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:773558:-1
position: 773558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:768642-773558:-1:exon

LOC109798696
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798696
product: 50S ribosomal protein L1, chloroplastic
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_020359057.2
SIO_010081: LOC109798696
subclass of: SO_0000673
so part of: LOC109798696
location: complement(join(768642..769064,769146..769271,769520..769603,769985..770112,771594..771648,771765..771944,773086..773558))
location: region:768642-773558:-1
so has part: feature:773086-773558:-1:exon
so has part: feature:771765-771944:-1:exon
so has part: feature:771594-771648:-1:exon
so has part: feature:769985-770112:-1:exon
so has part: feature:769520-769603:-1:exon
so has part: feature:769146-769271:-1:exon
so has part: feature:768642-769064:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:773086-773558:-1:exon

position:773086:-1
position: 773086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:771765-771944:-1:exon

position:771765:-1
position: 771765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:771944:-1
position: 771944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:771594-771648:-1:exon

position:771594:-1
position: 771594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:771648:-1
position: 771648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:769985-770112:-1:exon

position:769985:-1
position: 769985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:770112:-1
position: 770112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:769520-769603:-1:exon

position:769520:-1
position: 769520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:769603:-1
position: 769603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:769146-769271:-1:exon

position:769146:-1
position: 769146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:769271:-1
position: 769271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:768642-769064:-1:exon

position:769064:-1
position: 769064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109798696
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798696
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 50S ribosomal protein L1, chloroplastic
translation: MASCTAPPSLMLTHADLSPSLRSFSHRPISRTFSLYPLVFKPTLWAHLREPRPRSSPALVAALAAELQVPETLDQTEDGLAEPDATATVTTVKPKKGKAALPLKRDRTRSKRFLEIQKLRERKKEYDLKTAISLVKETAKTKFVETVEAHFRLNIDPKYNDQQLRATVNLPKGTGKPVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKILGPRGLMPNPKAGTVTPNIPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEDDLLINLLAAVKSVEANKPSGAKGVYWKSAHICSAMGPSIRLNIREMLDYRLPSI
SIO_010081: LOC109798696
subclass of: SO_0000673
so part of: LOC109798696
location: complement(join(768930..769064,769146..769271,769520..769603,769985..770112,771594..771648,771765..771944,773086..773406))
location: region:768930-773406:-1
so has part: feature:773086-773406:-1:exon
so has part: feature:771765-771944:-1:exon
so has part: feature:771594-771648:-1:exon
so has part: feature:769985-770112:-1:exon
so has part: feature:769520-769603:-1:exon
so has part: feature:769146-769271:-1:exon
so has part: feature:768930-769064:-1:exon

XP_020214646.1
type: Protein
SIO_000068: ncbiprotein

position:768930:-1
position: 768930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:773406:-1
position: 773406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:773086-773406:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:771765-771944:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:771594-771648:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:769985-770112:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:769520-769603:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:769146-769271:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:768930-769064:-1:exon

LOC109798764
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798764
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 779848..784417
location: region:779848-784417:1
so has part: feature:779848-784417:1:exon
subclass of: SO_0000010

109798764
type: Gene
SIO_000068: ncbigene

position:779848:1
position: 779848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:784417:1
position: 784417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:779848-784417:1:exon

LOC109798764
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798764
product: protein RETICULATA-RELATED 4, chloroplastic
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_020359150.2
SIO_010081: LOC109798764
subclass of: SO_0000673
so part of: LOC109798764
location: join(779848..780427,781951..782019,782228..782359,782493..782546,782623..782667,783603..783742,783815..783940,784035..784417)
location: region:779848-784417:1
so has part: feature:779848-780427:1:exon
so has part: feature:781951-782019:1:exon
so has part: feature:782228-782359:1:exon
so has part: feature:782493-782546:1:exon
so has part: feature:782623-782667:1:exon
so has part: feature:783603-783742:1:exon
so has part: feature:783815-783940:1:exon
so has part: feature:784035-784417:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:779848-780427:1:exon

position:780427:1
position: 780427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:781951-782019:1:exon

position:781951:1
position: 781951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:782019:1
position: 782019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:782228-782359:1:exon

position:782228:1
position: 782228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:782359:1
position: 782359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:782493-782546:1:exon

position:782493:1
position: 782493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:782546:1
position: 782546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:782623-782667:1:exon

position:782623:1
position: 782623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:782667:1
position: 782667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:783603-783742:1:exon

position:783603:1
position: 783603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:783742:1
position: 783742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:783815-783940:1:exon

position:783815:1
position: 783815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:783940:1
position: 783940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:784035-784417:1:exon

position:784035:1
position: 784035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109798764
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798764
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein RETICULATA-RELATED 4, chloroplastic
translation: MALASFSAPSFSLHFSPRSPFPLSTSSLSSRRTARFPPSAPLSTPAIFASAHGNGAGGGRGAGGGGGGGGDDEAEDRNRNREEALLVLAQAGRPLENLQADLAAAIQSGRVPAAIVQRLFELEKSAVFRWLLNFGGFRERLLADDLFLTKVAIECGVGIFTKTAAELEKRKEKFSKELDFVCADVIMAIVADFMLVWLPAPTVSLRPPLAVSAGTIAKFFYGCPENAFQVALAGTSYTLIQRIGAIVRNGAKLFAVGTGASLIGTGVTNALINARKVVDKSFAAEAEDVPVISTSIAYGVYMAVSSNLRYQILAGIIEQRILEPLLHQQKLILSAICFAVRTGNTFLGSLLWVDYARWVGVQRSRD
SIO_010081: LOC109798764
subclass of: SO_0000673
so part of: LOC109798764
location: join(779942..780427,781951..782019,782228..782359,782493..782546,782623..782667,783603..783742,783815..783940,784035..784083)
location: region:779942-784083:1
so has part: feature:779942-780427:1:exon
so has part: feature:781951-782019:1:exon
so has part: feature:782228-782359:1:exon
so has part: feature:782493-782546:1:exon
so has part: feature:782623-782667:1:exon
so has part: feature:783603-783742:1:exon
so has part: feature:783815-783940:1:exon
so has part: feature:784035-784083:1:exon

XP_020214739.1
type: Protein
SIO_000068: ncbiprotein

position:779942:1
position: 779942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:784083:1
position: 784083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:779942-780427:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:781951-782019:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:782228-782359:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:782493-782546:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:782623-782667:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:783603-783742:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:783815-783940:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:784035-784083:1:exon

LOC109798995
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798995
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 785346..787273
location: region:785346-787273:1
so has part: feature:785346-787273:1:exon
subclass of: SO_0000010

109798995
type: Gene
SIO_000068: ncbigene

position:785346:1
position: 785346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:787273:1
position: 787273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:785346-787273:1:exon

LOC109798995
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798995
product: pentatricopeptide repeat-containing protein At1g34160
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020359459.2
SIO_010081: LOC109798995
subclass of: SO_0000673
so part of: LOC109798995
location: 785346..787273
location: region:785346-787273:1
so has part: feature:785346-787273:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:785346-787273:1:exon

LOC109798995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798995
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pentatricopeptide repeat-containing protein At1g34160
translation: MASQSQSQLDSLLQKCTSLIHMKQLQAHLITTGKFQFHPSRTKLLELCAISPAGNLSFAAQVFRRIQTPSTNDWNALLRGLAQGPEPAQALSWYRAISRSPQKVDALTCSFALKGCARALAFSEATQIHSQLLRFGFEADVLLLTTLLDVYAKTGDIDAAQKLFDRMPKRDIASWNAMISGLAQGSRPNEAIALFNRMKEEGWRPNEVTVLGALSACSQLGALKQGQIIHAYVVDEKLDTNVIVCNAVIDMYAKCGFVDKAYSVFLSMSCRKSLITWNTMIMAFAMNGDGCKALDLLDQMVVDGVNPDAVSYLAALCACNHGGLVEEGVRLFDMMKGCGVKLNVKHYGSVVDLLGRAGRIKEACEVINSMPMFPDVVLWQSLLGASKTHGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAAQQRWHDVGRVRKAMKIKDVRKVPGFSYTEIDCRIHKFVNGDQSHPSSKEIYAKLDEIKFRIKAYGYAAETNLVLHDIGEEDKENVLNYHSEKLAVAYGLISTSDETPIQVIKNLRICVDCHAVIKIISKIYNREIIVRDRARFHRFKEGVCSCRDYW
SIO_010081: LOC109798995
subclass of: SO_0000673
so part of: LOC109798995
location: 785423..787162
location: region:785423-787162:1
so has part: feature:785423-787162:1:exon

XP_020215048.1
type: Protein
SIO_000068: ncbiprotein

position:785423:1
position: 785423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:787162:1
position: 787162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:785423-787162:1:exon

LOC109798596
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109798596
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 788188..796930
location: region:788188-796930:1
so has part: feature:788188-796930:1:exon
subclass of: SO_0000010

109798596
type: Gene
SIO_000068: ncbigene

position:788188:1
position: 788188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:796930:1
position: 796930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:788188-796930:1:exon

LOC109798596
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798596
product: phosphatidylinositol 3-kinase, root isoform, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XM_020358930.2
SIO_010081: LOC109798596
subclass of: SO_0000673
so part of: LOC109798596
location: join(788188..788530,788629..788725,789289..789385,789611..789763,789871..790080,790454..790632,791338..791485,792226..792321,792919..793054,793142..793263,793767..793961,794147..794317,794491..794628,794861..795015,795620..795763,795866..796013,796090..796270,796542..796930)
location: region:788188-796930:1
so has part: feature:788188-788530:1:exon
so has part: feature:788629-788725:1:exon
so has part: feature:789289-789385:1:exon
so has part: feature:789611-789763:1:exon
so has part: feature:789871-790080:1:exon
so has part: feature:790454-790632:1:exon
so has part: feature:791338-791485:1:exon
so has part: feature:792226-792321:1:exon
so has part: feature:792919-793054:1:exon
so has part: feature:793142-793263:1:exon
so has part: feature:793767-793961:1:exon
so has part: feature:794147-794317:1:exon
so has part: feature:794491-794628:1:exon
so has part: feature:794861-795015:1:exon
so has part: feature:795620-795763:1:exon
so has part: feature:795866-796013:1:exon
so has part: feature:796090-796270:1:exon
so has part: feature:796542-796930:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:788188-788530:1:exon

position:788530:1
position: 788530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:788629-788725:1:exon

position:788629:1
position: 788629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:788725:1
position: 788725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:789289-789385:1:exon

position:789289:1
position: 789289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:789385:1
position: 789385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:789611-789763:1:exon

position:789611:1
position: 789611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:789763:1
position: 789763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:789871-790080:1:exon

position:789871:1
position: 789871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:790080:1
position: 790080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:790454-790632:1:exon

position:790454:1
position: 790454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:790632:1
position: 790632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:791338-791485:1:exon

position:791338:1
position: 791338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:791485:1
position: 791485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:792226-792321:1:exon

position:792226:1
position: 792226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:792321:1
position: 792321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:792919-793054:1:exon

position:792919:1
position: 792919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:793054:1
position: 793054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:793142-793263:1:exon

position:793142:1
position: 793142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:793263:1
position: 793263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:793767-793961:1:exon

position:793767:1
position: 793767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:793961:1
position: 793961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:794147-794317:1:exon

position:794147:1
position: 794147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:794317:1
position: 794317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:794491-794628:1:exon

position:794491:1
position: 794491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:794628:1
position: 794628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:794861-795015:1:exon

position:794861:1
position: 794861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:795015:1
position: 795015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:795620-795763:1:exon

position:795620:1
position: 795620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:795763:1
position: 795763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:795866-796013:1:exon

position:795866:1
position: 795866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:796013:1
position: 796013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:796090-796270:1:exon

position:796090:1
position: 796090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:796270:1
position: 796270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:796542-796930:1:exon

position:796542:1
position: 796542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109798596
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798596
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 3-kinase, root isoform isoform X1
translation: MTDNEFRFFLSCDINLPVTFRVERLEGNLPLPKFPNLENNAPAENRSTELFVECALYIDGAPFGLPTRTRLESTGPSYCWNELITLTTKYRDLTAQSQLTFTVWDLSHGEGLIGGATILLFNSKKQLKTGKQKLRLWAGKEADGTFPTSTPGKVPRHERGELERLEKLVNKYERGQIQRVDWLDRLTFKTMERIKERESLKNGSSHLYLVVDFCSFEHRVVFQESGANFLLPSPIASTNDIVIVWDPEVGKINPSEHKQLKLARSLTRGVIDRDLKPSSNERKSIQRILKYPPTRTLSGDERQLLWKFRFSLMSEKRALTKFLRCVEWSDVQEAKQALELMGKWEMIDVCDALELLSPVFESEEVRAYAVSVLERADDEELQCYLLQLVQALRFERSDKSRLSHFLVQRALCNIELASFLRWFVAVELYDPAYAKRFYCTYEILEENMMKMAAGVNGEEDGFKQWQSLVRQTELTAQLCSITRDVRNVRGNTQKKIEKLRQLLSGLLSELTYFDEPIRSPLAPGVLITGIVPSESSIFKSALHPLRLTFRTANGGTSKIIFKKGDDIRQDQLVVQMVSLMDRLLKLENLDLHLTPYKVLATGQDEGMLEFIPSRSLAQILSEHRSIISYLQKFHPDDHGPFGITATCLETFIKSCAGYSVITYILGIGDRHLDNLLLRNDGRLFHVDFGFILGRDPKPFPPPMKLCKEMVEAMGGAESQYYTRFKSYCCEAYNILRKSSNLILNLFYLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEASIHFFQDLINESVSALFPQMVETIHRWAQYWR
SIO_010081: LOC109798596
subclass of: SO_0000673
so part of: LOC109798596
location: join(788419..788530,788629..788725,789289..789385,789611..789763,789871..790080,790454..790632,791338..791485,792226..792321,792919..793054,793142..793263,793767..793961,794147..794317,794491..794628,794861..795015,795620..795763,795866..796013,796090..796227)
location: region:788419-796227:1
so has part: feature:788419-788530:1:exon
so has part: feature:788629-788725:1:exon
so has part: feature:789289-789385:1:exon
so has part: feature:789611-789763:1:exon
so has part: feature:789871-790080:1:exon
so has part: feature:790454-790632:1:exon
so has part: feature:791338-791485:1:exon
so has part: feature:792226-792321:1:exon
so has part: feature:792919-793054:1:exon
so has part: feature:793142-793263:1:exon
so has part: feature:793767-793961:1:exon
so has part: feature:794147-794317:1:exon
so has part: feature:794491-794628:1:exon
so has part: feature:794861-795015:1:exon
so has part: feature:795620-795763:1:exon
so has part: feature:795866-796013:1:exon
so has part: feature:796090-796227:1:exon

XP_020214519.1
type: Protein
SIO_000068: ncbiprotein

position:788419:1
position: 788419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:796227:1
position: 796227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:788419-788530:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:788629-788725:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:789289-789385:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:789611-789763:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:789871-790080:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:790454-790632:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:791338-791485:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:792226-792321:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:792919-793054:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:793142-793263:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:793767-793961:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:794147-794317:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:794491-794628:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:794861-795015:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:795620-795763:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:795866-796013:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:796090-796227:1:exon

LOC109798596
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109798596
product: phosphatidylinositol 3-kinase, root isoform, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_020358931.2
SIO_010081: LOC109798596
subclass of: SO_0000673
so part of: LOC109798596
location: join(788654..788725,789294..789385,789611..789763,789871..790080,790454..790632,791338..791485,792226..792321,792919..793054,793142..793263,793767..793961,794147..794317,794491..794628,794861..795015,795620..795763,795866..796013,796090..796270,796542..796930)
location: region:788654-796930:1
so has part: feature:788654-788725:1:exon
so has part: feature:789294-789385:1:exon
so has part: feature:789611-789763:1:exon
so has part: feature:789871-790080:1:exon
so has part: feature:790454-790632:1:exon
so has part: feature:791338-791485:1:exon
so has part: feature:792226-792321:1:exon
so has part: feature:792919-793054:1:exon
so has part: feature:793142-793263:1:exon
so has part: feature:793767-793961:1:exon
so has part: feature:794147-794317:1:exon
so has part: feature:794491-794628:1:exon
so has part: feature:794861-795015:1:exon
so has part: feature:795620-795763:1:exon
so has part: feature:795866-796013:1:exon
so has part: feature:796090-796270:1:exon
so has part: feature:796542-796930:1:exon

position:788654:1
position: 788654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:788654-788725:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:789294-789385:1:exon

position:789294:1
position: 789294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:789611-789763:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:789871-790080:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:790454-790632:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:791338-791485:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:792226-792321:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:792919-793054:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:793142-793263:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:793767-793961:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:794147-794317:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:794491-794628:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:794861-795015:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:795620-795763:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:795866-796013:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:796090-796270:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:796542-796930:1:exon

LOC109798596
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109798596
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 3-kinase, root isoform isoform X2
translation: MVHRLAFPPEQESTGPSYCWNELITLTTKYRDLTAQSQLTFTVWDLSHGEGLIGGATILLFNSKKQLKTGKQKLRLWAGKEADGTFPTSTPGKVPRHERGELERLEKLVNKYERGQIQRVDWLDRLTFKTMERIKERESLKNGSSHLYLVVDFCSFEHRVVFQESGANFLLPSPIASTNDIVIVWDPEVGKINPSEHKQLKLARSLTRGVIDRDLKPSSNERKSIQRILKYPPTRTLSGDERQLLWKFRFSLMSEKRALTKFLRCVEWSDVQEAKQALELMGKWEMIDVCDALELLSPVFESEEVRAYAVSVLERADDEELQCYLLQLVQALRFERSDKSRLSHFLVQRALCNIELASFLRWFVAVELYDPAYAKRFYCTYEILEENMMKMAAGVNGEEDGFKQWQSLVRQTELTAQLCSITRDVRNVRGNTQKKIEKLRQLLSGLLSELTYFDEPIRSPLAPGVLITGIVPSESSIFKSALHPLRLTFRTANGGTSKIIFKKGDDIRQDQLVVQMVSLMDRLLKLENLDLHLTPYKVLATGQDEGMLEFIPSRSLAQILSEHRSIISYLQKFHPDDHGPFGITATCLETFIKSCAGYSVITYILGIGDRHLDNLLLRNDGRLFHVDFGFILGRDPKPFPPPMKLCKEMVEAMGGAESQYYTRFKSYCCEAYNILRKSSNLILNLFYLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEASIHFFQDLINESVSALFPQMVETIHRWAQYWR
SIO_010081: LOC109798596
subclass of: SO_0000673
so part of: LOC109798596
location: join(788692..788725,789294..789385,789611..789763,789871..790080,790454..790632,791338..791485,792226..792321,792919..793054,793142..793263,793767..793961,794147..794317,794491..794628,794861..795015,795620..795763,795866..796013,796090..796227)
location: region:788692-796227:1
so has part: feature:788692-788725:1:exon
so has part: feature:789294-789385:1:exon
so has part: feature:789611-789763:1:exon
so has part: feature:789871-790080:1:exon
so has part: feature:790454-790632:1:exon
so has part: feature:791338-791485:1:exon
so has part: feature:792226-792321:1:exon
so has part: feature:792919-793054:1:exon
so has part: feature:793142-793263:1:exon
so has part: feature:793767-793961:1:exon
so has part: feature:794147-794317:1:exon
so has part: feature:794491-794628:1:exon
so has part: feature:794861-795015:1:exon
so has part: feature:795620-795763:1:exon
so has part: feature:795866-796013:1:exon
so has part: feature:796090-796227:1:exon

XP_020214520.1
type: Protein
SIO_000068: ncbiprotein

position:788692:1
position: 788692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:788692-788725:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:789294-789385:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:789611-789763:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:789871-790080:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:790454-790632:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:791338-791485:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:792226-792321:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:792919-793054:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:793142-793263:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:793767-793961:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:794147-794317:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:794491-794628:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:794861-795015:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:795620-795763:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:795866-796013:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:796090-796227:1:exon

LOC109799046
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109799046
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 798579..799656
location: region:798579-799656:1
so has part: feature:798579-799656:1:exon
subclass of: SO_0000010

109799046
type: Gene
SIO_000068: ncbigene

position:798579:1
position: 798579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:799656:1
position: 799656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:798579-799656:1:exon

LOC109799046
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109799046
product: uncharacterized LOC109799046
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_020359528.2
SIO_010081: LOC109799046
subclass of: SO_0000673
so part of: LOC109799046
location: join(798579..798795,798871..798923,799213..799656)
location: region:798579-799656:1
so has part: feature:798579-798795:1:exon
so has part: feature:798871-798923:1:exon
so has part: feature:799213-799656:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:798579-798795:1:exon

position:798795:1
position: 798795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:798871-798923:1:exon

position:798871:1
position: 798871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:798923:1
position: 798923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:799213-799656:1:exon

position:799213:1
position: 799213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109799046
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3821
gene: LOC109799046
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109799046
translation: MTQKANLFKGQAKKKSIPPNRHGKAPVIRKGKRFVKPSKVTKEMDADREVSKFINHCNEIKAATLATKDGGQLGIIKQPQEPPSK
SIO_010081: LOC109799046
subclass of: SO_0000673
so part of: LOC109799046
location: join(798705..798795,798871..798923,799213..799326)
location: region:798705-799326:1
so has part: feature:798705-798795:1:exon
so has part: feature:798871-798923:1:exon
so has part: feature:799213-799326:1:exon

XP_020215117.1
type: Protein
SIO_000068: ncbiprotein

position:798705:1
position: 798705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:799326:1
position: 799326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:798705-798795:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:798871-798923:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:799213-799326:1:exon

LOC109799047
type: Gene
subclass of: SO_0000704
RO_0002162: 3821
gene: LOC109799047
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 802457..807470
location: region:802457-807470:1
so has part: feature:802457-807470:1:exon
subclass of: SO_0000010

109799047
type: Gene
SIO_000068: ncbigene

position:802457:1
position: 802457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:807470:1
position: 807470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:802457-807470:1:exon

LOC109799047
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3821
gene: LOC109799047
product: ubiquitin-like modifier-activating enzyme atg7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_020359530.2
SIO_010081: LOC109799047
subclass of: SO_0000673
so part of: LOC109799047
location: join(802457..802749,802873..803090,803210..803401,803492..803546,803657..803751,804473..804662,804758..804857,804992..805136,805209..805367,805457..805645,805833..805994,806072..806187,806329..806468)
location: region:802457-806468:1
so has part: feature:802457-802749:1:exon
so has part: feature:802873-803090:1:exon
so has part: feature:803210-803401:1:exon
so has part: feature:803492-803546:1:exon
so has part: feature:803657-803751:1:exon
so has part: feature:804473-804662:1:exon
so has part: feature:804758-804857:1:exon
so has part: feature:804992-805136:1:exon
so has part: feature:805209-805367:1:exon
so has part: feature:805457-805645:1:exon
so has part: feature:805833-805994:1:exon
so has part: feature:806072-806187:1:exon
so has part: feature:806329-806468:1:exon

position:806468:1
position: 806468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:802457-802749:1:exon

position:802749:1
position: 802749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:802873-803090:1:exon

position:802873:1
position: 802873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:803090:1
position: 803090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:803210-803401:1:exon