Comamonas odontotermitis strain WLL plasmid unnamed1, complete sequence.
Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.
Submitted (13-SEP-2021) College of Resources and Environmental Sciences, Nanjing Agricultural University, Weigang1#, Nanjing, Jiangsu 210095, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP083452.1.\nBacteria and source DNA available from Jiangsu Provincial Key Lab\nof Solid Organic Waste Utilization,Nanjing Agricultural University,\nNanjing 210095, Jiangsu, Peoples R China.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP 2.3 v. March-2019\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 120.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 10/16/2022 03:30:38\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 4,452\nCDSs (total) :: 4,350\nGenes (coding) :: 4,296\nCDSs (with protein) :: 4,296\nGenes (RNA) :: 102\nrRNAs :: 6, 6, 6 (5S, 16S, 23S)\ncomplete rRNAs :: 6, 6, 6 (5S, 16S, 23S)\ntRNAs :: 81\nncRNAs :: 3\nPseudo Genes (total) :: 54\nCDSs (without protein) :: 54\nPseudo Genes (ambiguous residues) :: 0 of 54\nPseudo Genes (frameshifted) :: 17 of 54\nPseudo Genes (incomplete) :: 42 of 54\nPseudo Genes (internal stop) :: 5 of 54\nPseudo Genes (multiple problems) :: 8 of 54\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: similar to AA sequence:RefSeq:WP_003069469.1
GO:0016021 - integral component of membrane [Evidence IEA]
GO:0015293 - symporter activity [Evidence IEA]
GO:0032329 - serine transport [Evidence IEA]; GO:0015826 - threonine transport [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012202593.1
COORDINATES: similar to AA sequence:RefSeq:WP_010466445.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019043172.1
COORDINATES: similar to AA sequence:RefSeq:WP_010110259.1
GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006299455.1
COORDINATES: similar to AA sequence:RefSeq:WP_016452157.1
COORDINATES: similar to AA sequence:RefSeq:WP_016448685.1
catalyzes the formation of 5-keto-4-deoxy-D-glucarate from glucarate; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013519393.1
COORDINATES: similar to AA sequence:RefSeq:WP_020227625.1
GO:0047448 - 5-dehydro-4-deoxyglucarate dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003059547.1
tripartite tricarboxylate transporter substrate binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011805239.1
FadR/GntR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_019655827.1
COORDINATES: similar to AA sequence:RefSeq:WP_019332510.1
SMP-30/gluconolactonase/LRE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012746866.1
TRAP transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013595022.1
COORDINATES: similar to AA sequence:RefSeq:WP_019655823.1
COORDINATES: similar to AA sequence:RefSeq:WP_012746863.1
GO:0008867 - galactarate dehydratase activity [Evidence IEA]
GO:0046392 - galactarate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017405277.1
COORDINATES: similar to AA sequence:RefSeq:WP_020228910.1
COORDINATES: similar to AA sequence:RefSeq:WP_007874195.1
GO:0019867 - outer membrane [Evidence IEA]
GO:0015343 - siderophore transmembrane transporter activity [Evidence IEA]
GO:0015891 - siderophore transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019702642.1
COORDINATES: similar to AA sequence:RefSeq:WP_018907470.1
COORDINATES: similar to AA sequence:RefSeq:WP_017710129.1
COORDINATES: similar to AA sequence:RefSeq:WP_011003972.1
COORDINATES: similar to AA sequence:RefSeq:WP_011003971.1
COORDINATES: similar to AA sequence:RefSeq:WP_012840186.1
GO:0004474 - malate synthase activity [Evidence IEA]
GO:0006097 - glyoxylate cycle [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003262825.1
COORDINATES: similar to AA sequence:RefSeq:WP_003080926.1
COORDINATES: similar to AA sequence:RefSeq:WP_003068182.1
COORDINATES: similar to AA sequence:RefSeq:WP_003080931.1
COORDINATES: similar to AA sequence:RefSeq:WP_003060536.1
COORDINATES: similar to AA sequence:RefSeq:WP_010466436.1
COORDINATES: similar to AA sequence:RefSeq:WP_011793597.1
GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013804755.1
GO:0042834 - peptidoglycan binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013592970.1
thiol:disulfide interchange protein DsbA/DsbL
COORDINATES: similar to AA sequence:RefSeq:WP_013520829.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0001530 - lipopolysaccharide binding [Evidence IEA]
GO:0015920 - lipopolysaccharide transport [Evidence IEA]
lipopolysaccharide transport periplasmic protein LptA
COORDINATES: similar to AA sequence:RefSeq:WP_016450697.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]; GO:0015221 - lipopolysaccharide transmembrane transporter activity [Evidence IEA]
LPS export ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_003060568.1
GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012675.2
COORDINATES: similar to AA sequence:RefSeq:WP_003080945.1
aspartyl/asparaginyl beta-hydroxylase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010401043.1
COORDINATES: similar to AA sequence:RefSeq:WP_009393272.1
COORDINATES: similar to AA sequence:RefSeq:WP_013391892.1
COORDINATES: similar to AA sequence:RefSeq:WP_012839987.1
organic hydroperoxide resistance protein
COORDINATES: similar to AA sequence:RefSeq:WP_010462825.1
COORDINATES: similar to AA sequence:RefSeq:WP_020228652.1
GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_019042389.1
COORDINATES: similar to AA sequence:RefSeq:WP_006576985.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0004644 - phosphoribosylglycinamide formyltransferase activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
formate-dependent phosphoribosylglycinamide formyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013517463.1
tannase/feruloyl esterase family alpha/beta hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_011808938.1
GO:0008714 - AMP nucleosidase activity [Evidence IEA]
GO:0044209 - AMP salvage [Evidence IEA]; GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003068715.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003724 - RNA helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003050831.1
cation diffusion facilitator family transporter
COORDINATES: similar to AA sequence:RefSeq:WP_003068709.1
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007923309.1
COORDINATES: similar to AA sequence:RefSeq:WP_003051143.1
COORDINATES: similar to AA sequence:RefSeq:WP_016451887.1
GO:0016805 - dipeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007868454.1
2-dehydro-3-deoxy-6-phosphogalactonate aldolase
COORDINATES: similar to AA sequence:RefSeq:WP_018905523.1
COORDINATES: similar to AA sequence:RefSeq:WP_013539755.1
COORDINATES: similar to AA sequence:RefSeq:WP_007849611.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007849607.1
COORDINATES: similar to AA sequence:RefSeq:WP_019646638.1
COORDINATES: similar to AA sequence:RefSeq:WP_007849591.1
COORDINATES: similar to AA sequence:RefSeq:WP_011481622.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015064677.1
COORDINATES: similar to AA sequence:RefSeq:WP_015064678.1
MurR/RpiR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_010466594.1
COORDINATES: similar to AA sequence:RefSeq:WP_019042038.1
COORDINATES: similar to AA sequence:RefSeq:WP_011793367.1
COORDINATES: similar to AA sequence:RefSeq:WP_012205503.1
COORDINATES: similar to AA sequence:RefSeq:WP_016445986.1
COORDINATES: similar to AA sequence:RefSeq:WP_011967091.1
COORDINATES: similar to AA sequence:RefSeq:WP_017674906.1
COORDINATES: similar to AA sequence:RefSeq:WP_013804301.1
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012203154.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011797255.1
COORDINATES: similar to AA sequence:RefSeq:WP_011797254.1
GO:0009379 - Holliday junction helicase complex [Evidence IEA]
GO:0009378 - four-way junction helicase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
Holliday junction branch migration protein RuvA
COORDINATES: protein motif:HMM:NF024758.2
trypsin-like peptidase domain-containing protein
COORDINATES: protein motif:HMM:NF012318.2
COORDINATES: similar to AA sequence:RefSeq:WP_013517481.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0009378 - four-way junction helicase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
Holliday junction branch migration DNA helicase RuvB
COORDINATES: protein motif:HMM:NF015431.2
COORDINATES: similar to AA sequence:RefSeq:WP_013517486.1
COORDINATES: similar to AA sequence:RefSeq:WP_011797246.1
COORDINATES: similar to AA sequence:RefSeq:WP_013699588.1
GO:0008033 - tRNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008907163.1
COORDINATES: similar to AA sequence:RefSeq:WP_008907164.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013900040.1
COORDINATES: similar to AA sequence:RefSeq:WP_006767272.1
COORDINATES: similar to AA sequence:RefSeq:WP_019654597.1
COORDINATES: similar to AA sequence:RefSeq:WP_010462722.1
COORDINATES: similar to AA sequence:RefSeq:WP_013596460.1
COORDINATES: protein motif:HMM:NF019581.2
COORDINATES: similar to AA sequence:RefSeq:WP_012203183.1
COORDINATES: similar to AA sequence:RefSeq:WP_011806426.1
COORDINATES: similar to AA sequence:RefSeq:WP_013800961.1
COORDINATES: similar to AA sequence:RefSeq:WP_016451135.1
COORDINATES: similar to AA sequence:RefSeq:WP_011806423.1
COORDINATES: similar to AA sequence:RefSeq:WP_016447842.1
COORDINATES: similar to AA sequence:RefSeq:WP_005799676.1
endonuclease/exonuclease/phosphatase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005798289.1
GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
GO:0006662 - glycerol ether metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003058179.1
COORDINATES: similar to AA sequence:RefSeq:WP_020165153.1
GO:0004672 - protein kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016453825.1
COORDINATES: similar to AA sequence:RefSeq:WP_016449754.1
COORDINATES: protein motif:HMM:NF018435.2
COORDINATES: similar to AA sequence:RefSeq:WP_015015871.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0004810 - tRNA adenylyltransferase activity [Evidence IEA]
GO:0001680 - tRNA 3'-terminal CCA addition [Evidence IEA]
multifunctional CCA addition/repair protein
COORDINATES: similar to AA sequence:RefSeq:WP_012204644.1
COORDINATES: similar to AA sequence:RefSeq:WP_007850716.1
amino acid ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011797220.1
glutathione S-transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019577188.1
COORDINATES: protein motif:HMM:NF013231.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020226454.1
GO:0030272 - 5-formyltetrahydrofolate cyclo-ligase activity [Evidence IEA]
GO:0006730 - one-carbon metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007856548.1
lytic transglycosylase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013517068.1
COORDINATES: similar to AA sequence:RefSeq:WP_006158031.1
COORDINATES: similar to AA sequence:RefSeq:WP_011519559.1
crotonase/enoyl-CoA hydratase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016450520.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_010812089.1
COORDINATES: similar to AA sequence:RefSeq:WP_017406999.1
COORDINATES: similar to AA sequence:RefSeq:WP_013721174.1
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019573140.1
COORDINATES: similar to AA sequence:RefSeq:WP_003060679.1
COORDINATES: similar to AA sequence:RefSeq:WP_011810210.1
hydroxypyruvate isomerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012204770.1
COORDINATES: similar to AA sequence:RefSeq:WP_003477534.1
dicarboxylate/amino acid:cation symporter
COORDINATES: similar to AA sequence:RefSeq:WP_015016085.1
COORDINATES: similar to AA sequence:RefSeq:WP_010466423.1
FMN-binding glutamate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_020227898.1
COORDINATES: similar to AA sequence:RefSeq:WP_011348483.1
COORDINATES: similar to AA sequence:RefSeq:WP_011348484.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011280425.1
COORDINATES: similar to AA sequence:RefSeq:WP_003068040.1
COORDINATES: similar to AA sequence:RefSeq:WP_005674485.1
TFIIB-type zinc ribbon-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013593771.1
glycine zipper domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010100852.1
COORDINATES: similar to AA sequence:RefSeq:WP_013804725.1
COORDINATES: similar to AA sequence:RefSeq:WP_008906582.1
COORDINATES: similar to AA sequence:RefSeq:WP_008906577.1
GO:0009030 - thiamine-phosphate kinase activity [Evidence IEA]
GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011793619.1
COORDINATES: similar to AA sequence:RefSeq:WP_010466397.1
COORDINATES: similar to AA sequence:RefSeq:WP_012202654.1
GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007635327.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012402.2
COORDINATES: similar to AA sequence:RefSeq:WP_010466390.1
GO:0008967 - phosphoglycolate phosphatase activity [Evidence IEA]
GO:0043094 - cellular metabolic compound salvage [Evidence IEA]; GO:0008152 - metabolic process [Evidence IEA]; GO:0009853 - photorespiration [Evidence IEA]
PGP is an essential enzyme in the glycolate salvage pathway in higher organisms (photorespiration in plants). Phosphoglycolate results from the oxidase activity of RubisCO in the Calvin cycle when concentrations of carbon dioxide are low relative to oxygen. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (PF00702); Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015765345.1
GO:0004014 - adenosylmethionine decarboxylase activity [Evidence IEA]
GO:0008295 - spermidine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012655421.1
GO:0004049 - anthranilate synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013520796.1
COORDINATES: similar to AA sequence:RefSeq:WP_017405879.1
aminodeoxychorismate/anthranilate synthase component II
COORDINATES: similar to AA sequence:RefSeq:WP_009598761.1
COORDINATES: similar to AA sequence:RefSeq:WP_013723149.1
GO:0004048 - anthranilate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012655424.1
GO:0004425 - indole-3-glycerol-phosphate synthase activity [Evidence IEA]
GO:0006568 - tryptophan metabolic process [Evidence IEA]
indole-3-glycerol phosphate synthase TrpC
COORDINATES: similar to AA sequence:RefSeq:WP_005417155.1
COORDINATES: similar to AA sequence:RefSeq:WP_003079607.1
COORDINATES: similar to AA sequence:RefSeq:WP_003079605.1
GO:0008849 - enterochelin esterase activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007860133.1
GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008906551.1
COORDINATES: similar to AA sequence:RefSeq:WP_007860137.1
COORDINATES: similar to AA sequence:RefSeq:WP_019042674.1
gamma-glutamyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008266192.1
COORDINATES: similar to AA sequence:RefSeq:WP_003051904.1
COORDINATES: similar to AA sequence:RefSeq:WP_013804470.1
siderophore ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_020011664.1
iron chelate uptake ABC transporter family permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012202939.1
COORDINATES: similar to AA sequence:RefSeq:WP_003491907.1
COORDINATES: protein motif:HMM:NF012708.2
COORDINATES: similar to AA sequence:RefSeq:WP_007857942.1
GO:0016853 - isomerase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA
COORDINATES: similar to AA sequence:RefSeq:WP_010459431.1
COORDINATES: similar to AA sequence:RefSeq:WP_018903047.1
glycine betaine ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF028007.2
COORDINATES: similar to AA sequence:RefSeq:WP_020204145.1
GO:0003678 - DNA helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010466369.1
LysR substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF013718.2
COORDINATES: similar to AA sequence:RefSeq:WP_011803842.1
GO:0008412 - 4-hydroxybenzoate octaprenyltransferase activity [Evidence IEA]
GO:0006744 - ubiquinone biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007853933.1
COORDINATES: similar to AA sequence:RefSeq:WP_020227941.1
GO:0004735 - pyrroline-5-carboxylate reductase activity [Evidence IEA]
GO:0006561 - proline biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015012302.1
COORDINATES: similar to AA sequence:RefSeq:WP_013544117.1
esterase-like activity of phytase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012840095.1
GO:0015250 - water channel activity [Evidence IEA]
GO:0006833 - water transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_076612240.1
COORDINATES: similar to AA sequence:RefSeq:WP_015016028.1
GO:0004370 - glycerol kinase activity [Evidence IEA]
GO:0006071 - glycerol metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013520747.1
DeoR/GlpR family DNA-binding transcription regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011516940.1
COORDINATES: similar to AA sequence:RefSeq:WP_008906530.1
COORDINATES: similar to AA sequence:RefSeq:WP_007831603.1
COORDINATES: similar to AA sequence:RefSeq:WP_007831605.1
COORDINATES: similar to AA sequence:RefSeq:WP_007831606.1
COORDINATES: similar to AA sequence:RefSeq:WP_019699976.1
COORDINATES: similar to AA sequence:RefSeq:WP_012840092.1
glycerol-3-phosphate dehydrogenase/oxidase
COORDINATES: similar to AA sequence:RefSeq:WP_009124801.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011799760.1
COORDINATES: similar to AA sequence:RefSeq:WP_019561677.1
COORDINATES: similar to AA sequence:RefSeq:WP_007869264.1
COORDINATES: similar to AA sequence:RefSeq:WP_011799763.1
COORDINATES: similar to AA sequence:RefSeq:WP_012202969.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015016015.1
COORDINATES: similar to AA sequence:RefSeq:WP_011793793.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007861725.1
COORDINATES: similar to AA sequence:RefSeq:WP_015867794.1
COORDINATES: similar to AA sequence:RefSeq:WP_012202974.1
GO:0005887 - integral component of plasma membrane [Evidence IEA]
GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO:0043952 - protein transport by the Sec complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012348927.1
COORDINATES: similar to AA sequence:RefSeq:WP_018440462.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010106947.1
COORDINATES: similar to AA sequence:RefSeq:WP_011793800.1
GO:0015935 - small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012348923.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
DNA-directed RNA polymerase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_012840089.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011481419.1
COORDINATES: similar to AA sequence:RefSeq:WP_018903764.1
COORDINATES: protein motif:HMM:NF020084.2
FIST N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012202467.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_008903530.1
COORDINATES: similar to AA sequence:RefSeq:WP_013596740.1
COORDINATES: protein motif:HMM:NF015827.2
COORDINATES: similar to AA sequence:RefSeq:WP_007831187.1
COORDINATES: similar to AA sequence:RefSeq:WP_019577552.1
COORDINATES: similar to AA sequence:RefSeq:WP_014900481.1
COORDINATES: similar to AA sequence:RefSeq:WP_019576386.1
COORDINATES: similar to AA sequence:RefSeq:WP_019653939.1
COORDINATES: similar to AA sequence:RefSeq:WP_005799378.1
COORDINATES: protein motif:HMM:TIGR00254.1
GO:0009975 - cyclase activity [Evidence IEA]
GO:0009966 - regulation of signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008903517.1
GO:0008479 - queuine tRNA-ribosyltransferase activity [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019704062.1
COORDINATES: similar to AA sequence:RefSeq:WP_019652730.1
LLM class flavin-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_010460083.1
COORDINATES: similar to AA sequence:RefSeq:WP_019652732.1
COORDINATES: similar to AA sequence:RefSeq:WP_004398740.1
amino acid ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF012738.2
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007824971.1
COORDINATES: similar to AA sequence:RefSeq:WP_008523058.1
COORDINATES: similar to AA sequence:RefSeq:WP_006049793.1
COORDINATES: similar to AA sequence:RefSeq:WP_019652735.1
COORDINATES: similar to AA sequence:RefSeq:WP_013594659.1
GO:0008752 - FMN reductase activity [Evidence IEA]
GO:0044273 - sulfur compound catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003059287.1
COORDINATES: similar to AA sequence:RefSeq:WP_011796253.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]; GO:0003959 - NADPH dehydrogenase activity [Evidence IEA]
bifunctional salicylyl-CoA 5-hydroxylase/oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_003078050.1
COORDINATES: similar to AA sequence:RefSeq:WP_003059280.1
COORDINATES: similar to AA sequence:RefSeq:WP_013209156.1
COORDINATES: similar to AA sequence:RefSeq:WP_011796248.1
GO:0016405 - CoA-ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013594507.1
COORDINATES: similar to AA sequence:RefSeq:WP_019700979.1
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_019559360.1
COORDINATES: similar to AA sequence:RefSeq:WP_012206284.1
COORDINATES: similar to AA sequence:RefSeq:WP_019700982.1
COORDINATES: similar to AA sequence:RefSeq:WP_003078043.1
COORDINATES: similar to AA sequence:RefSeq:WP_019559364.1
COORDINATES: similar to AA sequence:RefSeq:WP_013594513.1
COORDINATES: similar to AA sequence:RefSeq:WP_020229885.1
COORDINATES: similar to AA sequence:RefSeq:WP_020229886.1
COORDINATES: similar to AA sequence:RefSeq:WP_007849716.1
COORDINATES: similar to AA sequence:RefSeq:WP_007849721.1
COORDINATES: similar to AA sequence:RefSeq:WP_007849724.1
COORDINATES: similar to AA sequence:RefSeq:WP_003078024.1
COORDINATES: similar to AA sequence:RefSeq:WP_015015963.1
COORDINATES: similar to AA sequence:RefSeq:WP_012836830.1
GO:0005658 - alpha DNA polymerase:primase complex [Evidence IEA]
GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011799869.1
lysophospholipid acyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015012415.1
SprT family zinc-dependent metalloprotease
COORDINATES: similar to AA sequence:RefSeq:WP_003050996.1
rhodanese-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018874680.1
COORDINATES: similar to AA sequence:RefSeq:WP_005373536.1
COORDINATES: similar to AA sequence:RefSeq:WP_014190027.1
COORDINATES: similar to AA sequence:RefSeq:WP_003073430.1
COORDINATES: similar to AA sequence:RefSeq:WP_015012418.1
COORDINATES: similar to AA sequence:RefSeq:WP_015012423.1
GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010462606.1
COORDINATES: similar to AA sequence:RefSeq:WP_012655577.1
GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
glucose-1-phosphate thymidylyltransferase RfbA
COORDINATES: similar to AA sequence:RefSeq:WP_019702873.1
GO:0008830 - dTDP-4-dehydrorhamnose 3,5-epimerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013596394.1
GO:0015627 - type II protein secretion system complex [Evidence IEA]
GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013804233.1
type II secretion system F family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007233710.1
type II secretion system major pseudopilin GspG
COORDINATES: similar to AA sequence:RefSeq:WP_020425011.1
prepilin-type N-terminal cleavage/methylation domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011808480.1
COORDINATES: similar to AA sequence:RefSeq:WP_013804230.1
COORDINATES: similar to AA sequence:RefSeq:WP_013596388.1
COORDINATES: protein motif:HMM:NF016992.2
COORDINATES: similar to AA sequence:RefSeq:WP_019702864.1
COORDINATES: protein motif:HMM:TIGR02517.1
COORDINATES: similar to AA sequence:RefSeq:WP_011797163.1
COORDINATES: protein motif:HMM:NF024545.2
COORDINATES: similar to AA sequence:RefSeq:WP_013596380.1
COORDINATES: similar to AA sequence:RefSeq:WP_019702858.1
COORDINATES: similar to AA sequence:RefSeq:WP_008903221.1
COORDINATES: similar to AA sequence:RefSeq:WP_016446450.1
COORDINATES: protein motif:HMM:NF025025.2
COORDINATES: similar to AA sequence:RefSeq:WP_011808429.1
methyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012203249.1
COORDINATES: similar to AA sequence:RefSeq:WP_010099746.1
COORDINATES: similar to AA sequence:RefSeq:WP_019656864.1
GO:0003991 - acetylglutamate kinase activity [Evidence IEA]
GO:0006592 - ornithine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012203254.1
GO:0010974 - negative regulation of division septum assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019574180.1
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_019656891.1
acyl-CoA dehydrogenase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010462534.1
COORDINATES: similar to AA sequence:RefSeq:WP_013596366.1
3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012203270.1
GO:0016746 - acyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011797111.1
COORDINATES: similar to AA sequence:RefSeq:WP_012655597.1
COORDINATES: similar to AA sequence:RefSeq:WP_013593057.1
COORDINATES: similar to AA sequence:RefSeq:WP_012836845.1
COORDINATES: similar to AA sequence:RefSeq:WP_016450378.1
COORDINATES: similar to AA sequence:RefSeq:WP_004321166.1
COORDINATES: similar to AA sequence:RefSeq:WP_012839891.1
COORDINATES: similar to AA sequence:RefSeq:WP_012655600.1
COORDINATES: similar to AA sequence:RefSeq:WP_013721376.1
ABC transporter ATP-binding protein/permease
COORDINATES: similar to AA sequence:RefSeq:WP_006159009.1
COORDINATES: similar to AA sequence:RefSeq:WP_015914384.1
COORDINATES: similar to AA sequence:RefSeq:WP_013541982.1
COORDINATES: similar to AA sequence:RefSeq:WP_011300265.1
COORDINATES: similar to AA sequence:RefSeq:WP_013540858.1
COORDINATES: similar to AA sequence:RefSeq:WP_017526947.1
COORDINATES: similar to AA sequence:RefSeq:WP_011806934.1
COORDINATES: similar to AA sequence:RefSeq:WP_007852163.1
COORDINATES: similar to AA sequence:RefSeq:WP_007862963.1
PhzF family phenazine biosynthesis protein
COORDINATES: similar to AA sequence:RefSeq:WP_013596683.1
COORDINATES: similar to AA sequence:RefSeq:WP_007838937.1
COORDINATES: similar to AA sequence:RefSeq:WP_011797448.1
PLP-dependent aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013520670.1
COORDINATES: similar to AA sequence:RefSeq:WP_008904429.1
COORDINATES: similar to AA sequence:RefSeq:WP_013800378.1