Glutamicibacter nicotianae strain OTC-16 plasmid unnamed2, complete sequence.
type: Entry
definition: Glutamicibacter nicotianae strain OTC-16 plasmid unnamed2, complete sequence.
sequence version: NZ_CP033083.1
sequence date: 2023-04-23
sequence: sequence
division: CON
label: NZ_CP033083.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN10052990
keyword: RefSeq
source: Glutamicibacter nicotianae
organism: Glutamicibacter nicotianae
taxonomy: Bacteria; Actinomycetota; Actinomycetes; Micrococcales; Micrococcaceae; Glutamicibacter.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP033083.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: FALCON v. v0.3.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 380.0x\nSequencing Technology :: PacBio RSII; Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/23/2023 04:04:57\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,582\nCDSs (total) :: 3,493\nGenes (coding) :: 3,445\nCDSs (with protein) :: 3,445\nGenes (RNA) :: 89\nrRNAs :: 7, 6, 6 (5S, 16S, 23S)\ncomplete rRNAs :: 7, 6, 6 (5S, 16S, 23S)\ntRNAs :: 67\nncRNAs :: 3\nPseudo Genes (total) :: 48\nCDSs (without protein) :: 48\nPseudo Genes (ambiguous residues) :: 0 of 48\nPseudo Genes (frameshifted) :: 17 of 48\nPseudo Genes (incomplete) :: 32 of 48\nPseudo Genes (internal stop) :: 4 of 48\nPseudo Genes (multiple problems) :: 4 of 48\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 29841
topology: circular
so has quality: SO_0000988
location: 1..29841
location: region:1-29841:1
RO_0002162: 37929

NZ_CP033083
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN10052990
type: BioSample
SIO_000068: biosample

1
title: Complete genome sequence of Oxytetracycline degradation strain Arthrobacter nicotianae OTC-16
author: Shi, Y.
author: Zhu, R.
journal: Unpublished

2
title: Direct Submission
author: Shi, Y.
author: Zhu, R.
journal: Submitted (15-OCT-2018) School of Forestry & Bio-technology, Zhejiang A & F University, Wu Su Street 666, Ling'an, Hangzhou, Zhejiang 311300, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition
type: FuzzyPosition

position:29841:1
position: 29841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition
type: FuzzyPosition

feature:1-29841:1:source
so part of: sequence
organism: Glutamicibacter nicotianae
mol type: genomic DNA
strain: OTC-16
isolation source: active sludge around pharmaceutical factory
plasmid: unnamed2
country: China: Zhejiang, Taizhou
collection date: 2016-12-12

37929
type: Taxonomy
SIO_000068: taxonomy

D3647_RS17595
type: Gene
subclass of: SO_0000704
RO_0002162: 37929
gene: intI1
locus tag: D3647_RS17595
pseudo: true
so part of: sequence
location: join(29247..29841,1..>1)
location: region:1-29841:1
so has part: feature:29247-29841:1:exon
so has part: feature:1-1:1:exon
subclass of: SO_0000010

urn:…
SIO_000300: 1
SIO_000628: feature:29247-29841:1:exon

position:29247:1
position: 29247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-1:1:exon

D3647_RS17595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37929
gene: intI1
locus tag: D3647_RS17595
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005221021.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: class 1 integron integrase IntI1
SIO_010081: D3647_RS17595
subclass of: SO_0000673
so part of: D3647_RS17595
location: join(29247..29841,1..>1)
location: region:1-29841:1
so has part: feature:29247-29841:1:exon
so has part: feature:1-1:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29247-29841:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-1:1:exon

D3647_RS18425
type: Gene
subclass of: SO_0000704
RO_0002162: 37929
locus tag: D3647_RS18425
so part of: sequence
location: complement(444..647)
location: region:444-647:-1
so has part: feature:444-647:-1:exon
subclass of: SO_0000010

position:444:-1
position: 444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:647:-1
position: 647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444-647:-1:exon

D3647_RS18425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37929
locus tag: D3647_RS18425
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: DDE-type integrase/transposase/recombinase
translation: MEKRLRWFWRRGFDPSWRLDETYVKVRGKWTYLYRAVDKRGDTIDFYLSPTRSAKAAKRFLGKACEA
SIO_010081: D3647_RS18425
subclass of: SO_0000673
so part of: D3647_RS18425
location: complement(444..647)
location: region:444-647:-1
so has part: feature:444-647:-1:exon

WP_244213646.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:444-647:-1:exon

D3647_RS17610
type: Gene
subclass of: SO_0000704
RO_0002162: 37929
gene: tet(33)
locus tag: D3647_RS17610
pseudo: true
so part of: sequence
location: complement(1187..2409)
location: region:1187-2409:-1
so has part: feature:1187-2409:-1:exon
subclass of: SO_0000010

position:1187:-1
position: 1187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2409:-1
position: 2409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1187-2409:-1:exon

D3647_RS17610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37929
gene: tet(33)
locus tag: D3647_RS17610
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010991840.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: tetracycline efflux MFS transporter Tet(33)
SIO_010081: D3647_RS17610
subclass of: SO_0000673
so part of: D3647_RS17610
location: complement(1187..2409)
location: region:1187-2409:-1
so has part: feature:1187-2409:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1187-2409:-1:exon

D3647_RS17615
type: Gene
subclass of: SO_0000704
RO_0002162: 37929
locus tag: D3647_RS17615
so part of: sequence
location: 2448..3017
location: region:2448-3017:1
so has part: feature:2448-3017:1:exon
subclass of: SO_0000010

position:2448:1
position: 2448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3017:1
position: 3017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2448-3017:1:exon

D3647_RS17615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37929
locus tag: D3647_RS17615
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010154754.1
GO process: GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TetR/AcrR family transcriptional regulator C-terminal domain-containing protein
translation: MAQKQARLDRAAVLRGARHVLNNTGIDGFTTRALAAHLRVQQPALYWHFRTKAHLLGSLAADVLDREHHASLPESGERWDDFLLRNARSFRTALLAVRDGARLHAEFHRQKSDQMPAGSDAPESQIEFLVSEGFAEGSAVRALMAISRYTVGFVLEEQTALDNGCEPVDQDLDFEFGLVAMVEGLASKR
SIO_010081: D3647_RS17615
subclass of: SO_0000673
so part of: D3647_RS17615
location: 2448..3017
location: region:2448-3017:1
so has part: feature:2448-3017:1:exon

WP_005882738.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2448-3017:1:exon

D3647_RS17625
type: Gene
subclass of: SO_0000704
RO_0002162: 37929
gene: mobF
locus tag: D3647_RS17625
pseudo: true
so part of: sequence
location: 3681..>4697
location: region:3681-4697:1
so has part: feature:3681-4697:1:exon
subclass of: SO_0000010

position:3681:1
position: 3681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4697:1
position: 4697
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3681-4697:1:exon

D3647_RS17625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37929
gene: mobF
locus tag: D3647_RS17625
inference: COORDINATES: protein motif:HMM:NF041492.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: MobF family relaxase
SIO_010081: D3647_RS17625
subclass of: SO_0000673
so part of: D3647_RS17625
location: 3681..>4697
location: region:3681-4697:1
so has part: feature:3681-4697:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3681-4697:1:exon

D3647_RS17635
type: Gene
subclass of: SO_0000704
RO_0002162: 37929
locus tag: D3647_RS17635
so part of: sequence
location: complement(5171..5935)
location: region:5171-5935:-1
so has part: feature:5171-5935:-1:exon
subclass of: SO_0000010

position:5171:-1
position: 5171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5935:-1
position: 5935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5171-5935:-1:exon

D3647_RS17635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37929
locus tag: D3647_RS17635
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001389365.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS6-like element IS6100 family transposase
translation: MTDFKWRHFQGDVILWAVRWYCRYPISYRDLEEMLAERGISVDHTTIYRWVQCYAPEMEKRLRWFWRRGFDPSWRLDETYVKVRGKWTYLYRAVDKRGDTIDFYLSPTRSAKAAKRFLGKALRGLKHWEKPATLNTDKAPSYGAAITELKREGKLDRETAHRQVKYLNNVIEADHGKLKILIKPVRGFKSIPTAYATIKGFEVMRALRKGQARPWCLQPGIRGEVRLVERAFGIGPSALTEAMGMLNHHFAAAA
SIO_010081: D3647_RS17635
subclass of: SO_0000673
so part of: D3647_RS17635
location: complement(5171..5935)
location: region:5171-5935:-1
so has part: feature:5171-5935:-1:exon

WP_001389365.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5171-5935:-1:exon

D3647_RS18430
type: Gene
subclass of: SO_0000704
RO_0002162: 37929
locus tag: D3647_RS18430
pseudo: true
so part of: sequence
location: complement(6053..>6121)
location: region:6053-6121:-1
so has part: feature:6053-6121:-1:exon
subclass of: SO_0000010

position:6053:-1
position: 6053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6121:-1
position: 6121
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6053-6121:-1:exon

D3647_RS18430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37929
locus tag: D3647_RS18430
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005229646.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: D3647_RS18430
subclass of: SO_0000673
so part of: D3647_RS18430
location: complement(6053..>6121)
location: region:6053-6121:-1
so has part: feature:6053-6121:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6053-6121:-1:exon

D3647_RS17645
type: Gene
subclass of: SO_0000704
RO_0002162: 37929
locus tag: D3647_RS17645
so part of: sequence
location: complement(6442..6942)
location: region:6442-6942:-1
so has part: feature:6442-6942:-1:exon
subclass of: SO_0000010

position:6442:-1
position: 6442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6942:-1
position: 6942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6442-6942:-1:exon

D3647_RS17645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37929
locus tag: D3647_RS17645
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004194535.1
GO function: GO:0008080 - N-acetyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MDSEEPPNVRVACSGDIDEVVRLMHDAAAWMSAKGTPAWDVARIDRTFAETFVLRSELLVASCSDGIVGCCTLSAEDPEFWPDALKGEAAYLHKLAVRRTHAGRGVSSALIEACRHAARTQGCAKLRLDCHPNLRGLYERLGFTHVDTFNPGWDPTFIAERLELEI
SIO_010081: D3647_RS17645
subclass of: SO_0000673
so part of: D3647_RS17645
location: complement(6442..6942)
location: region:6442-6942:-1
so has part: feature:6442-6942:-1:exon

WP_000376623.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6442-6942:-1:exon

D3647_RS17655
type: Gene
subclass of: SO_0000704
RO_0002162: 37929
gene: sul1
locus tag: D3647_RS17655
so part of: sequence
location: complement(7070..7909)
location: region:7070-7909:-1
so has part: feature:7070-7909:-1:exon
subclass of: SO_0000010

position:7070:-1
position: 7070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7909:-1
position: 7909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7070-7909:-1:exon

D3647_RS17655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37929
gene: sul1
locus tag: D3647_RS17655
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000259031.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfonamide-resistant dihydropteroate synthase Sul1
translation: MVTVFGILNLTEDSFFDESRRLDPAGAVTAAIEMLRVGSDVVDVGPAASHPDARPVSPADEIRRIAPLLDALSDQMHRVSIDSFQPETQRYALKRGVGYLNDIQGFPDPALYPDIAEADCRLVVMHSAQRDGIATRTGHLRPEDALDEIVRFFEARVSALRRSGVAADRLILDPGMGFFLSPAPETSLHVLSNLQKLKSALGLPLLVSVSRKSFLGATVGLPVKDLGPASLAAELHAIGNGADYVRTHAPGDLRSAITFSETLAKFRSRDARDRGLDHA
SIO_010081: D3647_RS17655
subclass of: SO_0000673
so part of: D3647_RS17655
location: complement(7070..7909)
location: region:7070-7909:-1
so has part: feature:7070-7909:-1:exon

WP_000259031.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7070-7909:-1:exon

D3647_RS17660
type: Gene
subclass of: SO_0000704
RO_0002162: 37929
locus tag: D3647_RS17660
so part of: sequence
location: complement(7903..8250)
location: region:7903-8250:-1
so has part: feature:7903-8250:-1:exon
subclass of: SO_0000010

position:7903:-1
position: 7903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8250:-1
position: 8250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7903-8250:-1:exon

D3647_RS17660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37929
locus tag: D3647_RS17660
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000679427.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: quaternary ammonium compound efflux SMR transporter QacE delta 1
translation: MKGWLFLVIAIVGEVIATSALKSSEGFTKLAPSAVVIIGYGIAFYFLSLVLKSIPVGVAYAVWSGLGVVIITAIAWLLHGQKLDAWGFVGMGLIIAAFLLARSPSWKSLRRPTPW
SIO_010081: D3647_RS17660
subclass of: SO_0000673
so part of: D3647_RS17660
location: complement(7903..8250)
location: region:7903-8250:-1
so has part: feature:7903-8250:-1:exon

WP_000679427.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7903-8250:-1:exon

D3647_RS17665
type: Gene
subclass of: SO_0000704
RO_0002162: 37929
locus tag: D3647_RS17665
pseudo: true
so part of: sequence
location: complement(8367..9205)
location: region:8367-9205:-1
so has part: feature:8367-9205:-1:exon
subclass of: SO_0000010

position:8367:-1
position: 8367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9205:-1
position: 9205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8367-9205:-1:exon

D3647_RS17665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37929
locus tag: D3647_RS17665
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001749984.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: AadA family aminoglycoside 3''-O-nucleotidyltransferase
SIO_010081: D3647_RS17665
subclass of: SO_0000673
so part of: D3647_RS17665
location: complement(8367..9205)
location: region:8367-9205:-1
so has part: feature:8367-9205:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8367-9205:-1:exon

D3647_RS17670
type: Gene
subclass of: SO_0000704
RO_0002162: 37929
gene: intI1
locus tag: D3647_RS17670
pseudo: true
so part of: sequence
location: 9351..>9947
location: region:9351-9947:1
so has part: feature:9351-9947:1:exon
subclass of: SO_0000010

position:9351:1
position: 9351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9947:1
position: 9947
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9351-9947:1:exon

D3647_RS17670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37929
gene: intI1
locus tag: D3647_RS17670
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005221021.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: class 1 integron integrase IntI1
SIO_010081: D3647_RS17670
subclass of: SO_0000673
so part of: D3647_RS17670
location: 9351..>9947
location: region:9351-9947:1
so has part: feature:9351-9947:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9351-9947:1:exon

D3647_RS17680
type: Gene
subclass of: SO_0000704
RO_0002162: 37929
locus tag: D3647_RS17680
so part of: sequence
location: complement(10001..10765)
location: region:10001-10765:-1
so has part: feature:10001-10765:-1:exon
subclass of: SO_0000010

position:10001:-1
position: 10001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10765:-1
position: 10765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10001-10765:-1:exon

D3647_RS17680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37929
locus tag: D3647_RS17680
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001389365.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS6-like element IS6100 family transposase
translation: MTDFKWRHFQGDVILWAVRWYCRYPISYRDLEEMLAERGISVDHTTIYRWVQCYAPEMEKRLRWFWRRGFDPSWRLDETYVKVRGKWTYLYRAVDKRGDTIDFYLSPTRSAKAAKRFLGKALRGLKHWEKPATLNTDKAPSYGAAITELKREGKLDRETAHRQVKYLNNVIEADHGKLKILIKPVRGFKSIPTAYATIKGFEVMRALRKGQARPWCLQPGIRGEVRLVERAFGIGPSALTEAMGMLNHHFAAAA
SIO_010081: D3647_RS17680
subclass of: SO_0000673
so part of: D3647_RS17680
location: complement(10001..10765)
location: region:10001-10765:-1
so has part: feature:10001-10765:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10001-10765:-1:exon

D3647_RS17690
type: Gene
subclass of: SO_0000704
RO_0002162: 37929
gene: tet(33)
locus tag: D3647_RS17690
so part of: sequence
location: complement(11135..12358)
location: region:11135-12358:-1
so has part: feature:11135-12358:-1:exon
subclass of: SO_0000010

position:11135:-1
position: 11135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12358:-1
position: 12358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11135-12358:-1:exon

D3647_RS17690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37929
gene: tet(33)
locus tag: D3647_RS17690
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010991840.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetracycline efflux MFS transporter Tet(33)
translation: MSSLTSARGSLATVLITASLDAAGMGLVMPILPALLHEAGVTADAVPLNVGVLIALYAVMQFIFAPVLGTLSDRFGRRRVLLVSLAGATVDYLVLATTSALSVFYIARAVAGITGATNAVTATVIADITPPHQRAKRFGLLSACYGGGMIAGPAMGGLFGAISPHLPFLLAALLSASNLALTFILLRETRPDSPARSASLAQHRGRPGLSAVPGITFLLVAFGLVQFIGQAPGATWVLFTEHRLDWSPVEVGISLSVFGIVQVLVQALLTGRIVEWIGEAKTVIIGCITDALGLVGLAIVTDAFSMAPILAALGIGGIGLPALQTLLSQRVDEQHQGRLQGVLASINSVTSIFGPVAFTTIFALTYINADGFLWLCAAALYVPCVILIMRGTAASPKFGSWASGDSM
SIO_010081: D3647_RS17690
subclass of: SO_0000673
so part of: D3647_RS17690
location: complement(11135..12358)
location: region:11135-12358:-1
so has part: feature:11135-12358:-1:exon

WP_121867990.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11135-12358:-1:exon

D3647_RS17695
type: Gene
subclass of: SO_0000704
RO_0002162: 37929
locus tag: D3647_RS17695
so part of: sequence
location: 12397..12966
location: region:12397-12966:1
so has part: feature:12397-12966:1:exon
subclass of: SO_0000010

position:12397:1
position: 12397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12966:1
position: 12966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12397-12966:1:exon

D3647_RS17695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37929
locus tag: D3647_RS17695
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010154754.1
GO process: GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TetR/AcrR family transcriptional regulator C-terminal domain-containing protein
translation: MAQKQARLDRAAVLRGARHVLNNTGIDGFTTRALAAHLRVQQPALYWHFRTKAHLLGSLAADVLDREHHASLPESGERWDDFLLRNARSFRTALLAVRDGARLHAEFHRQKSDQMPAGSDAPESQIEFLVSEGFAEGSAVRALMAISRYTVGFVLEEQTALDNGCEPVDQDLDFEFGLVAMVEGLASKR
SIO_010081: D3647_RS17695
subclass of: SO_0000673
so part of: D3647_RS17695
location: 12397..12966
location: region:12397-12966:1
so has part: feature:12397-12966:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12397-12966:1:exon

D3647_RS17705
type: Gene
subclass of: SO_0000704
RO_0002162: 37929
gene: mobF
locus tag: D3647_RS17705
pseudo: true
so part of: sequence
location: 13630..>14646
location: region:13630-14646:1
so has part: feature:13630-14646:1:exon
subclass of: SO_0000010

position:13630:1
position: 13630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14646:1
position: 14646
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13630-14646:1:exon

D3647_RS17705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37929
gene: mobF
locus tag: D3647_RS17705
inference: COORDINATES: protein motif:HMM:NF041492.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: MobF family relaxase
SIO_010081: D3647_RS17705
subclass of: SO_0000673
so part of: D3647_RS17705
location: 13630..>14646
location: region:13630-14646:1
so has part: feature:13630-14646:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13630-14646:1:exon

D3647_RS17715
type: Gene
subclass of: SO_0000704
RO_0002162: 37929
locus tag: D3647_RS17715
so part of: sequence
location: complement(15120..15884)
location: region:15120-15884:-1
so has part: feature:15120-15884:-1:exon
subclass of: SO_0000010

position:15120:-1
position: 15120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15884:-1
position: 15884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15120-15884:-1:exon

D3647_RS17715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37929
locus tag: D3647_RS17715
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001389365.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS6-like element IS6100 family transposase
translation: MTDFKWRHFQGDVILWAVRWYCRYPISYRDLEEMLAERGISVDHTTIYRWVQCYAPEMEKRLRWFWRRGFDPSWRLDETYVKVRGKWTYLYRAVDKRGDTIDFYLSPTRSAKAAKRFLGKALRGLKHWEKPATLNTDKAPSYGAAITELKREGKLDRETAHRQVKYLNNVIEADHGKLKILIKPVRGFKSIPTAYATIKGFEVMRALRKGQARPWCLQPGIRGEVRLVERAFGIGPSALTEAMGMLNHHFAAAA
SIO_010081: D3647_RS17715
subclass of: SO_0000673
so part of: D3647_RS17715
location: complement(15120..15884)
location: region:15120-15884:-1
so has part: feature:15120-15884:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15120-15884:-1:exon

D3647_RS18435
type: Gene
subclass of: SO_0000704
RO_0002162: 37929
locus tag: D3647_RS18435
pseudo: true
so part of: sequence
location: complement(16002..>16070)
location: region:16002-16070:-1
so has part: feature:16002-16070:-1:exon
subclass of: SO_0000010

position:16002:-1
position: 16002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16070:-1
position: 16070
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16002-16070:-1:exon

D3647_RS18435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37929
locus tag: D3647_RS18435
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005229646.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: D3647_RS18435
subclass of: SO_0000673
so part of: D3647_RS18435
location: complement(16002..>16070)
location: region:16002-16070:-1
so has part: feature:16002-16070:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16002-16070:-1:exon

D3647_RS17725
type: Gene
subclass of: SO_0000704
RO_0002162: 37929
locus tag: D3647_RS17725
so part of: sequence
location: complement(16391..16891)
location: region:16391-16891:-1
so has part: feature:16391-16891:-1:exon
subclass of: SO_0000010

position:16391:-1
position: 16391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16891:-1
position: 16891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16391-16891:-1:exon

D3647_RS17725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37929
locus tag: D3647_RS17725
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004194535.1
GO function: GO:0008080 - N-acetyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MDSEEPPNVRVACSGDIDEVVRLMHDAAAWMSAKGTPAWDVARIDRTFAETFVLRSELLVASCSDGIVGCCTLSAEDPEFWPDALKGEAAYLHKLAVRRTHAGRGVSSALIEACRHAARTQGCAKLRLDCHPNLRGLYERLGFTHVDTFNPGWDPTFIAERLELEI
SIO_010081: D3647_RS17725
subclass of: SO_0000673
so part of: D3647_RS17725
location: complement(16391..16891)
location: region:16391-16891:-1
so has part: feature:16391-16891:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16391-16891:-1:exon

D3647_RS17735
type: Gene
subclass of: SO_0000704
RO_0002162: 37929
gene: sul1
locus tag: D3647_RS17735
so part of: sequence
location: complement(17019..17858)
location: region:17019-17858:-1
so has part: feature:17019-17858:-1:exon
subclass of: SO_0000010

position:17019:-1
position: 17019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17858:-1
position: 17858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17019-17858:-1:exon

D3647_RS17735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37929
gene: sul1
locus tag: D3647_RS17735
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000259031.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfonamide-resistant dihydropteroate synthase Sul1
translation: MVTVFGILNLTEDSFFDESRRLDPAGAVTAAIEMLRVGSDVVDVGPAASHPDARPVSPADEIRRIAPLLDALSDQMHRVSIDSFQPETQRYALKRGVGYLNDIQGFPDPALYPDIAEADCRLVVMHSAQRDGIATRTGHLRPEDALDEIVRFFEARVSALRRSGVAADRLILDPGMGFFLSPAPETSLHVLSNLQKLKSALGLPLLVSVSRKSFLGATVGLPVKDLGPASLAAELHAIGNGADYVRTHAPGDLRSAITFSETLAKFRSRDARDRGLDHA
SIO_010081: D3647_RS17735
subclass of: SO_0000673
so part of: D3647_RS17735
location: complement(17019..17858)
location: region:17019-17858:-1
so has part: feature:17019-17858:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17019-17858:-1:exon

D3647_RS17740
type: Gene
subclass of: SO_0000704
RO_0002162: 37929
locus tag: D3647_RS17740
so part of: sequence
location: complement(17852..18199)
location: region:17852-18199:-1
so has part: feature:17852-18199:-1:exon
subclass of: SO_0000010

position:17852:-1
position: 17852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18199:-1
position: 18199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17852-18199:-1:exon

D3647_RS17740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37929
locus tag: D3647_RS17740
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000679427.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: quaternary ammonium compound efflux SMR transporter QacE delta 1
translation: MKGWLFLVIAIVGEVIATSALKSSEGFTKLAPSAVVIIGYGIAFYFLSLVLKSIPVGVAYAVWSGLGVVIITAIAWLLHGQKLDAWGFVGMGLIIAAFLLARSPSWKSLRRPTPW
SIO_010081: D3647_RS17740
subclass of: SO_0000673
so part of: D3647_RS17740
location: complement(17852..18199)
location: region:17852-18199:-1
so has part: feature:17852-18199:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17852-18199:-1:exon

D3647_RS17745
type: Gene
subclass of: SO_0000704
RO_0002162: 37929
locus tag: D3647_RS17745
pseudo: true
so part of: sequence
location: complement(18316..19154)
location: region:18316-19154:-1
so has part: feature:18316-19154:-1:exon
subclass of: SO_0000010

position:18316:-1
position: 18316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19154:-1
position: 19154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18316-19154:-1:exon

D3647_RS17745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37929
locus tag: D3647_RS17745
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001749984.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: AadA family aminoglycoside 3''-O-nucleotidyltransferase
SIO_010081: D3647_RS17745
subclass of: SO_0000673
so part of: D3647_RS17745
location: complement(18316..19154)
location: region:18316-19154:-1
so has part: feature:18316-19154:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18316-19154:-1:exon

D3647_RS17750
type: Gene
subclass of: SO_0000704
RO_0002162: 37929
gene: intI1
locus tag: D3647_RS17750
pseudo: true
so part of: sequence
location: 19300..>19896
location: region:19300-19896:1
so has part: feature:19300-19896:1:exon
subclass of: SO_0000010

position:19300:1
position: 19300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19896:1
position: 19896
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19300-19896:1:exon

D3647_RS17750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37929
gene: intI1
locus tag: D3647_RS17750
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005221021.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: class 1 integron integrase IntI1
SIO_010081: D3647_RS17750
subclass of: SO_0000673
so part of: D3647_RS17750
location: 19300..>19896
location: region:19300-19896:1
so has part: feature:19300-19896:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19300-19896:1:exon

D3647_RS17760
type: Gene
subclass of: SO_0000704
RO_0002162: 37929
locus tag: D3647_RS17760
so part of: sequence
location: complement(19950..20714)
location: region:19950-20714:-1
so has part: feature:19950-20714:-1:exon
subclass of: SO_0000010

position:19950:-1
position: 19950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20714:-1
position: 20714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19950-20714:-1:exon

D3647_RS17760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37929
locus tag: D3647_RS17760
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001389365.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS6-like element IS6100 family transposase
translation: MTDFKWRHFQGDVILWAVRWYCRYPISYRDLEEMLAERGISVDHTTIYRWVQCYAPEMEKRLRWFWRRGFDPSWRLDETYVKVRGKWTYLYRAVDKRGDTIDFYLSPTRSAKAAKRFLGKALRGLKHWEKPATLNTDKAPSYGAAITELKREGKLDRETAHRQVKYLNNVIEADHGKLKILIKPVRGFKSIPTAYATIKGFEVMRALRKGQARPWCLQPGIRGEVRLVERAFGIGPSALTEAMGMLNHHFAAAA
SIO_010081: D3647_RS17760
subclass of: SO_0000673
so part of: D3647_RS17760
location: complement(19950..20714)
location: region:19950-20714:-1
so has part: feature:19950-20714:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19950-20714:-1:exon

D3647_RS17770
type: Gene
subclass of: SO_0000704
RO_0002162: 37929
gene: tet(33)
locus tag: D3647_RS17770
so part of: sequence
location: complement(21084..22307)
location: region:21084-22307:-1
so has part: feature:21084-22307:-1:exon
subclass of: SO_0000010

position:21084:-1
position: 21084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22307:-1
position: 22307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21084-22307:-1:exon

D3647_RS17770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37929
gene: tet(33)
locus tag: D3647_RS17770
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010991840.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetracycline efflux MFS transporter Tet(33)
translation: MSSLTSARGSLATVLITASLDAAGMGLVMPILPALLHEAGVTADAVPLNVGVLIALYAVMQFIFAPVLGTLSDRFGRRRVLLVSLAGATVDYLVLATTSALSVFYIARAVAGITGATNAVTATVIADITPPHQRAKRFGLLSACYGGGMIAGPAMGGLFGAISPHLPFLLAALLSASNLALTFILLRETRPDSPARSASLAQHRGRPGLSAVPGITFLLVAFGLVQFIGQAPGATWVLFTEHRLDWSPVEVGISLSVFGIVQVLVQALLTGRIVEWIGEAKTVIIGCITDALGLVGLAIVTDAFSMAPILAALGIGGIGLPALQTLLSQRVDEQHQGRLQGVLASINSVTSIFGPVAFTTIFALTYINADGFLWLCAAALYVPCVILIMRGTAASPKFGSWASGDSM
SIO_010081: D3647_RS17770
subclass of: SO_0000673
so part of: D3647_RS17770
location: complement(21084..22307)
location: region:21084-22307:-1
so has part: feature:21084-22307:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21084-22307:-1:exon

D3647_RS17775
type: Gene
subclass of: SO_0000704
RO_0002162: 37929
locus tag: D3647_RS17775
so part of: sequence
location: 22346..22915
location: region:22346-22915:1
so has part: feature:22346-22915:1:exon
subclass of: SO_0000010

position:22346:1
position: 22346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22915:1
position: 22915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22346-22915:1:exon

D3647_RS17775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37929
locus tag: D3647_RS17775
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010154754.1
GO process: GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TetR/AcrR family transcriptional regulator C-terminal domain-containing protein
translation: MAQKQARLDRAAVLRGARHVLNNTGIDGFTTRALAAHLRVQQPALYWHFRTKAHLLGSLAADVLDREHHASLPESGERWDDFLLRNARSFRTALLAVRDGARLHAEFHRQKSDQMPAGSDAPESQIEFLVSEGFAEGSAVRALMAISRYTVGFVLEEQTALDNGCEPVDQDLDFEFGLVAMVEGLASKR
SIO_010081: D3647_RS17775
subclass of: SO_0000673
so part of: D3647_RS17775
location: 22346..22915
location: region:22346-22915:1
so has part: feature:22346-22915:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22346-22915:1:exon

D3647_RS17785
type: Gene
subclass of: SO_0000704
RO_0002162: 37929
gene: mobF
locus tag: D3647_RS17785
pseudo: true
so part of: sequence
location: 23579..>24595
location: region:23579-24595:1
so has part: feature:23579-24595:1:exon
subclass of: SO_0000010

position:23579:1
position: 23579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24595:1
position: 24595
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23579-24595:1:exon

D3647_RS17785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37929
gene: mobF
locus tag: D3647_RS17785
inference: COORDINATES: protein motif:HMM:NF041492.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: MobF family relaxase
SIO_010081: D3647_RS17785
subclass of: SO_0000673
so part of: D3647_RS17785
location: 23579..>24595
location: region:23579-24595:1
so has part: feature:23579-24595:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23579-24595:1:exon

D3647_RS17795
type: Gene
subclass of: SO_0000704
RO_0002162: 37929
locus tag: D3647_RS17795
so part of: sequence
location: complement(25069..25833)
location: region:25069-25833:-1
so has part: feature:25069-25833:-1:exon
subclass of: SO_0000010

position:25069:-1
position: 25069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25833:-1
position: 25833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25069-25833:-1:exon

D3647_RS17795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37929
locus tag: D3647_RS17795
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001389365.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS6-like element IS6100 family transposase
translation: MTDFKWRHFQGDVILWAVRWYCRYPISYRDLEEMLAERGISVDHTTIYRWVQCYAPEMEKRLRWFWRRGFDPSWRLDETYVKVRGKWTYLYRAVDKRGDTIDFYLSPTRSAKAAKRFLGKALRGLKHWEKPATLNTDKAPSYGAAITELKREGKLDRETAHRQVKYLNNVIEADHGKLKILIKPVRGFKSIPTAYATIKGFEVMRALRKGQARPWCLQPGIRGEVRLVERAFGIGPSALTEAMGMLNHHFAAAA
SIO_010081: D3647_RS17795
subclass of: SO_0000673
so part of: D3647_RS17795
location: complement(25069..25833)
location: region:25069-25833:-1
so has part: feature:25069-25833:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25069-25833:-1:exon

D3647_RS18440
type: Gene
subclass of: SO_0000704
RO_0002162: 37929
locus tag: D3647_RS18440
pseudo: true
so part of: sequence
location: complement(25951..>26019)
location: region:25951-26019:-1
so has part: feature:25951-26019:-1:exon
subclass of: SO_0000010

position:25951:-1
position: 25951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26019:-1
position: 26019
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25951-26019:-1:exon

D3647_RS18440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37929
locus tag: D3647_RS18440
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005229646.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: D3647_RS18440
subclass of: SO_0000673
so part of: D3647_RS18440
location: complement(25951..>26019)
location: region:25951-26019:-1
so has part: feature:25951-26019:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25951-26019:-1:exon

D3647_RS17805
type: Gene
subclass of: SO_0000704
RO_0002162: 37929
locus tag: D3647_RS17805
so part of: sequence
location: complement(26340..26840)
location: region:26340-26840:-1
so has part: feature:26340-26840:-1:exon
subclass of: SO_0000010

position:26340:-1
position: 26340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26840:-1
position: 26840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26340-26840:-1:exon

D3647_RS17805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37929
locus tag: D3647_RS17805
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004194535.1
GO function: GO:0008080 - N-acetyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MDSEEPPNVRVACSGDIDEVVRLMHDAAAWMSAKGTPAWDVARIDRTFAETFVLRSELLVASCSDGIVGCCTLSAEDPEFWPDALKGEAAYLHKLAVRRTHAGRGVSSALIEACRHAARTQGCAKLRLDCHPNLRGLYERLGFTHVDTFNPGWDPTFIAERLELEI
SIO_010081: D3647_RS17805
subclass of: SO_0000673
so part of: D3647_RS17805
location: complement(26340..26840)
location: region:26340-26840:-1
so has part: feature:26340-26840:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26340-26840:-1:exon

D3647_RS17815
type: Gene
subclass of: SO_0000704
RO_0002162: 37929
gene: sul1
locus tag: D3647_RS17815
so part of: sequence
location: complement(26968..27807)
location: region:26968-27807:-1
so has part: feature:26968-27807:-1:exon
subclass of: SO_0000010

position:26968:-1
position: 26968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27807:-1
position: 27807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26968-27807:-1:exon

D3647_RS17815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37929
gene: sul1
locus tag: D3647_RS17815
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000259031.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfonamide-resistant dihydropteroate synthase Sul1
translation: MVTVFGILNLTEDSFFDESRRLDPAGAVTAAIEMLRVGSDVVDVGPAASHPDARPVSPADEIRRIAPLLDALSDQMHRVSIDSFQPETQRYALKRGVGYLNDIQGFPDPALYPDIAEADCRLVVMHSAQRDGIATRTGHLRPEDALDEIVRFFEARVSALRRSGVAADRLILDPGMGFFLSPAPETSLHVLSNLQKLKSALGLPLLVSVSRKSFLGATVGLPVKDLGPASLAAELHAIGNGADYVRTHAPGDLRSAITFSETLAKFRSRDARDRGLDHA
SIO_010081: D3647_RS17815
subclass of: SO_0000673
so part of: D3647_RS17815
location: complement(26968..27807)
location: region:26968-27807:-1
so has part: feature:26968-27807:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26968-27807:-1:exon

D3647_RS17820
type: Gene
subclass of: SO_0000704
RO_0002162: 37929
locus tag: D3647_RS17820
so part of: sequence
location: complement(27801..28148)
location: region:27801-28148:-1
so has part: feature:27801-28148:-1:exon
subclass of: SO_0000010

position:27801:-1
position: 27801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28148:-1
position: 28148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27801-28148:-1:exon

D3647_RS17820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37929
locus tag: D3647_RS17820
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000679427.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: quaternary ammonium compound efflux SMR transporter QacE delta 1
translation: MKGWLFLVIAIVGEVIATSALKSSEGFTKLAPSAVVIIGYGIAFYFLSLVLKSIPVGVAYAVWSGLGVVIITAIAWLLHGQKLDAWGFVGMGLIIAAFLLARSPSWKSLRRPTPW
SIO_010081: D3647_RS17820
subclass of: SO_0000673
so part of: D3647_RS17820
location: complement(27801..28148)
location: region:27801-28148:-1
so has part: feature:27801-28148:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27801-28148:-1:exon

D3647_RS17825
type: Gene
subclass of: SO_0000704
RO_0002162: 37929
locus tag: D3647_RS17825
pseudo: true
so part of: sequence
location: complement(28265..29101)
location: region:28265-29101:-1
so has part: feature:28265-29101:-1:exon
subclass of: SO_0000010

position:28265:-1
position: 28265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29101:-1
position: 29101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28265-29101:-1:exon

D3647_RS17825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37929
locus tag: D3647_RS17825
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001749984.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: AadA family aminoglycoside 3''-O-nucleotidyltransferase
SIO_010081: D3647_RS17825
subclass of: SO_0000673
so part of: D3647_RS17825
location: complement(28265..29101)
location: region:28265-29101:-1
so has part: feature:28265-29101:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:28265-29101:-1:exon