Arthrobacter crystallopoietes strain DSM 20117 plasmid pLDW-9, 23s ribosomal rna rrna prediction is too short.
type: Entry
definition: Arthrobacter crystallopoietes strain DSM 20117 plasmid pLDW-9, 23s ribosomal rna rrna prediction is too short.
sequence version: NZ_CP018864.1
sequence date: 2023-02-06
sequence: sequence
division: CON
label: NZ_CP018864.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN06162171
keyword: RefSeq
source: Arthrobacter crystallopoietes
organism: Arthrobacter crystallopoietes
taxonomy: Bacteria; Actinomycetota; Actinomycetes; Micrococcales; Micrococcaceae; Arthrobacter.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP018864.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\nThis genome has a base modification file available.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: SMRT analysis 2.3 v. HGAP protocol 2\nGenome Coverage :: 100.86\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/06/2023 07:52:51\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,661\nCDSs (total) :: 4,582\nGenes (coding) :: 4,528\nCDSs (with protein) :: 4,528\nGenes (RNA) :: 79\nrRNAs :: 9, 9, 9 (5S, 16S, 23S)\ncomplete rRNAs :: 9, 9, 9 (5S, 16S, 23S)\ntRNAs :: 48\nncRNAs :: 4\nPseudo Genes (total) :: 54\nCDSs (without protein) :: 54\nPseudo Genes (ambiguous residues) :: 0 of 54\nPseudo Genes (frameshifted) :: 23 of 54\nPseudo Genes (incomplete) :: 31 of 54\nPseudo Genes (internal stop) :: 8 of 54\nPseudo Genes (multiple problems) :: 8 of 54\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 25865
topology: circular
so has quality: SO_0000988
location: 1..25865
location: region:1-25865:1
RO_0002162: 37928

NZ_CP018864
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN06162171
type: BioSample
SIO_000068: biosample

1
title: The whole genome sequencing and assembly of Arthrobacter crystallopoietes DSM 20117T strain
author: Lee, Y.-J.
author: Yi, H.
author: Bahn, Y.-S.
author: Kim, J.F.
author: Lee, D.-W.
journal: Unpublished

2
title: Direct Submission
author: Lee, Y.-J.
author: Yi, H.
author: Bahn, Y.-S.
author: Kim, J.F.
author: Lee, D.-W.
journal: Submitted (19-DEC-2016) Kyungpook National University, School of Applied Biosciences, 80 Daehak-Ro, Bukgu, Daegu 41566, South Korea

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25865:1
position: 25865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-25865:1:source
so part of: sequence
organism: Arthrobacter crystallopoietes
mol type: genomic DNA
strain: DSM 20117
isolation source: soil
culture collection: DSM:20117
type material: type strain of Arthrobacter crystallopoietes
plasmid: pLDW-9
country: USA
collection date: 1963

37928
type: Taxonomy
SIO_000068: taxonomy

AC20117_RS21935
type: Gene
subclass of: SO_0000704
RO_0002162: 37928
locus tag: AC20117_RS21935
so part of: sequence
location: complement(1..2745)
location: region:1-2745:-1
so has part: feature:1-2745:-1:exon
subclass of: SO_0000573

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2745:-1
position: 2745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-2745:-1:exon

AC20117_RS21935
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 37928
locus tag: AC20117_RS21935
product: 23S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02541
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: AC20117_RS21935
subclass of: SO_0000673
so part of: AC20117_RS21935
location: complement(1..2745)
location: region:1-2745:-1
so has part: feature:1-2745:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1-2745:-1:exon

AC20117_RS21940
type: Gene
subclass of: SO_0000704
RO_0002162: 37928
locus tag: AC20117_RS21940
so part of: sequence
location: complement(3205..4731)
location: region:3205-4731:-1
so has part: feature:3205-4731:-1:exon
subclass of: SO_0000573

position:3205:-1
position: 3205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4731:-1
position: 4731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3205-4731:-1:exon

AC20117_RS21940
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 37928
locus tag: AC20117_RS21940
product: 16S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00177
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: AC20117_RS21940
subclass of: SO_0000673
so part of: AC20117_RS21940
location: complement(3205..4731)
location: region:3205-4731:-1
so has part: feature:3205-4731:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3205-4731:-1:exon

AC20117_RS21945
type: Gene
subclass of: SO_0000704
RO_0002162: 37928
locus tag: AC20117_RS21945
old locus tag: AC20117_22015
so part of: sequence
location: 5544..5768
location: region:5544-5768:1
so has part: feature:5544-5768:1:exon
subclass of: SO_0000010

position:5544:1
position: 5544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5768:1
position: 5768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5544-5768:1:exon

AC20117_RS21945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37928
locus tag: AC20117_RS21945
old locus tag: AC20117_22015
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPERNQAAPATGSTRARTPARRQRPAAGAPESRARPDPDGAAAAPRREPAPGLQPGHRNGVEVMQVGVVSGNGP
SIO_010081: AC20117_RS21945
subclass of: SO_0000673
so part of: AC20117_RS21945
location: 5544..5768
location: region:5544-5768:1
so has part: feature:5544-5768:1:exon

WP_101632767.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5544-5768:1:exon

AC20117_RS21950
type: Gene
subclass of: SO_0000704
RO_0002162: 37928
gene: rrf
locus tag: AC20117_RS21950
so part of: sequence
location: complement(5818..5933)
location: region:5818-5933:-1
so has part: feature:5818-5933:-1:exon
subclass of: SO_0000573

position:5818:-1
position: 5818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5933:-1
position: 5933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5818-5933:-1:exon

AC20117_RS21950
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 37928
gene: rrf
locus tag: AC20117_RS21950
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: AC20117_RS21950
subclass of: SO_0000673
so part of: AC20117_RS21950
location: complement(5818..5933)
location: region:5818-5933:-1
so has part: feature:5818-5933:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5818-5933:-1:exon

AC20117_RS21955
type: Gene
subclass of: SO_0000704
RO_0002162: 37928
locus tag: AC20117_RS21955
so part of: sequence
location: complement(6145..9276)
location: region:6145-9276:-1
so has part: feature:6145-9276:-1:exon
subclass of: SO_0000573

position:6145:-1
position: 6145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9276:-1
position: 9276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6145-9276:-1:exon

AC20117_RS21955
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 37928
locus tag: AC20117_RS21955
product: 23S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02541
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: AC20117_RS21955
subclass of: SO_0000673
so part of: AC20117_RS21955
location: complement(6145..9276)
location: region:6145-9276:-1
so has part: feature:6145-9276:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6145-9276:-1:exon

AC20117_RS21960
type: Gene
subclass of: SO_0000704
RO_0002162: 37928
locus tag: AC20117_RS21960
so part of: sequence
location: complement(9736..11257)
location: region:9736-11257:-1
so has part: feature:9736-11257:-1:exon
subclass of: SO_0000573

position:9736:-1
position: 9736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11257:-1
position: 11257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9736-11257:-1:exon

AC20117_RS21960
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 37928
locus tag: AC20117_RS21960
product: 16S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00177
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: AC20117_RS21960
subclass of: SO_0000673
so part of: AC20117_RS21960
location: complement(9736..11257)
location: region:9736-11257:-1
so has part: feature:9736-11257:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9736-11257:-1:exon

AC20117_RS21965
type: Gene
subclass of: SO_0000704
RO_0002162: 37928
locus tag: AC20117_RS21965
old locus tag: AC20117_22035
so part of: sequence
location: 11888..12253
location: region:11888-12253:1
so has part: feature:11888-12253:1:exon
subclass of: SO_0000010

position:11888:1
position: 11888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12253:1
position: 12253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11888-12253:1:exon

AC20117_RS21965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37928
locus tag: AC20117_RS21965
old locus tag: AC20117_22035
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKHSNARGSPARIRPESARTSRRQNATGTPQGKVCLKSNTSRHFALRTSRSHGRQDRHLHAGAEPGRAATGSTRARTPARRQRPAAGAPESRARPDPDGAAAAPRREPARRPAARTPERR
SIO_010081: AC20117_RS21965
subclass of: SO_0000673
so part of: AC20117_RS21965
location: 11888..12253
location: region:11888-12253:1
so has part: feature:11888-12253:1:exon

WP_101632768.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11888-12253:1:exon

AC20117_RS21970
type: Gene
subclass of: SO_0000704
RO_0002162: 37928
gene: rrf
locus tag: AC20117_RS21970
so part of: sequence
location: complement(12344..12460)
location: region:12344-12460:-1
so has part: feature:12344-12460:-1:exon
subclass of: SO_0000573

position:12344:-1
position: 12344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12460:-1
position: 12460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12344-12460:-1:exon

AC20117_RS21970
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 37928
gene: rrf
locus tag: AC20117_RS21970
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: AC20117_RS21970
subclass of: SO_0000673
so part of: AC20117_RS21970
location: complement(12344..12460)
location: region:12344-12460:-1
so has part: feature:12344-12460:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12344-12460:-1:exon

AC20117_RS21975
type: Gene
subclass of: SO_0000704
RO_0002162: 37928
locus tag: AC20117_RS21975
so part of: sequence
location: complement(12674..15810)
location: region:12674-15810:-1
so has part: feature:12674-15810:-1:exon
subclass of: SO_0000573

position:12674:-1
position: 12674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15810:-1
position: 15810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12674-15810:-1:exon

AC20117_RS21975
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 37928
locus tag: AC20117_RS21975
product: 23S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02541
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: AC20117_RS21975
subclass of: SO_0000673
so part of: AC20117_RS21975
location: complement(12674..15810)
location: region:12674-15810:-1
so has part: feature:12674-15810:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12674-15810:-1:exon

AC20117_RS21980
type: Gene
subclass of: SO_0000704
RO_0002162: 37928
locus tag: AC20117_RS21980
so part of: sequence
location: complement(16270..17789)
location: region:16270-17789:-1
so has part: feature:16270-17789:-1:exon
subclass of: SO_0000573

position:16270:-1
position: 16270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17789:-1
position: 17789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16270-17789:-1:exon

AC20117_RS21980
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 37928
locus tag: AC20117_RS21980
product: 16S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00177
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: AC20117_RS21980
subclass of: SO_0000673
so part of: AC20117_RS21980
location: complement(16270..17789)
location: region:16270-17789:-1
so has part: feature:16270-17789:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16270-17789:-1:exon

AC20117_RS23465
type: Gene
subclass of: SO_0000704
RO_0002162: 37928
locus tag: AC20117_RS23465
so part of: sequence
location: complement(18208..18366)
location: region:18208-18366:-1
so has part: feature:18208-18366:-1:exon
subclass of: SO_0000010

position:18208:-1
position: 18208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18366:-1
position: 18366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18208-18366:-1:exon

AC20117_RS23465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37928
locus tag: AC20117_RS23465
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDLVLLPCLFGARPAGAVAADPGAGKIRVDPRFSAAAGAVPGGGFAVVREGV
SIO_010081: AC20117_RS23465
subclass of: SO_0000673
so part of: AC20117_RS23465
location: complement(18208..18366)
location: region:18208-18366:-1
so has part: feature:18208-18366:-1:exon

WP_158300507.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18208-18366:-1:exon

AC20117_RS21985
type: Gene
subclass of: SO_0000704
RO_0002162: 37928
locus tag: AC20117_RS21985
old locus tag: AC20117_22055
so part of: sequence
location: 18599..18823
location: region:18599-18823:1
so has part: feature:18599-18823:1:exon
subclass of: SO_0000010

position:18599:1
position: 18599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18823:1
position: 18823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18599-18823:1:exon

AC20117_RS21985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37928
locus tag: AC20117_RS21985
old locus tag: AC20117_22055
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPERNQAAPATGSTRARTPARRQRPAAGAPESRARPDPDGAAAARGGSRHAGLQPGHRNGVEVMQVGVVSGNGP
SIO_010081: AC20117_RS21985
subclass of: SO_0000673
so part of: AC20117_RS21985
location: 18599..18823
location: region:18599-18823:1
so has part: feature:18599-18823:1:exon

WP_101632769.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18599-18823:1:exon

AC20117_RS21990
type: Gene
subclass of: SO_0000704
RO_0002162: 37928
gene: rrf
locus tag: AC20117_RS21990
so part of: sequence
location: complement(18874..18989)
location: region:18874-18989:-1
so has part: feature:18874-18989:-1:exon
subclass of: SO_0000573

position:18874:-1
position: 18874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18989:-1
position: 18989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18874-18989:-1:exon

AC20117_RS21990
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 37928
gene: rrf
locus tag: AC20117_RS21990
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: AC20117_RS21990
subclass of: SO_0000673
so part of: AC20117_RS21990
location: complement(18874..18989)
location: region:18874-18989:-1
so has part: feature:18874-18989:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18874-18989:-1:exon

AC20117_RS21995
type: Gene
subclass of: SO_0000704
RO_0002162: 37928
locus tag: AC20117_RS21995
so part of: sequence
location: complement(19203..22346)
location: region:19203-22346:-1
so has part: feature:19203-22346:-1:exon
subclass of: SO_0000573

position:19203:-1
position: 19203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22346:-1
position: 22346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19203-22346:-1:exon

AC20117_RS21995
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 37928
locus tag: AC20117_RS21995
product: 23S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02541
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: AC20117_RS21995
subclass of: SO_0000673
so part of: AC20117_RS21995
location: complement(19203..22346)
location: region:19203-22346:-1
so has part: feature:19203-22346:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19203-22346:-1:exon

AC20117_RS22000
type: Gene
subclass of: SO_0000704
RO_0002162: 37928
locus tag: AC20117_RS22000
so part of: sequence
location: complement(22810..24333)
location: region:22810-24333:-1
so has part: feature:22810-24333:-1:exon
subclass of: SO_0000573

position:22810:-1
position: 22810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24333:-1
position: 24333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22810-24333:-1:exon

AC20117_RS22000
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 37928
locus tag: AC20117_RS22000
product: 16S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00177
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: AC20117_RS22000
subclass of: SO_0000673
so part of: AC20117_RS22000
location: complement(22810..24333)
location: region:22810-24333:-1
so has part: feature:22810-24333:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22810-24333:-1:exon

AC20117_RS22010
type: Gene
subclass of: SO_0000704
RO_0002162: 37928
gene: rrf
locus tag: AC20117_RS22010
so part of: sequence
location: complement(25429..25545)
location: region:25429-25545:-1
so has part: feature:25429-25545:-1:exon
subclass of: SO_0000573

position:25429:-1
position: 25429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25545:-1
position: 25545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25429-25545:-1:exon

AC20117_RS22010
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 37928
gene: rrf
locus tag: AC20117_RS22010
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: AC20117_RS22010
subclass of: SO_0000673
so part of: AC20117_RS22010
location: complement(25429..25545)
location: region:25429-25545:-1
so has part: feature:25429-25545:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25429-25545:-1:exon

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 37928
note: 23S ribosomal RNA rRNA prediction is too short
so part of: sequence
location: complement(25758..25865)
location: region:25758-25865:-1
so has part: feature:25758-25865:-1:region

position:25758:-1
position: 25758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25865:-1
position: 25865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25758-25865:-1:region