Stegostoma fasciatum isolate 6-17 chromosome 28, sSteFas1.1, whole genome shotgun sequence.
type: Entry
definition: Stegostoma fasciatum isolate 6-17 chromosome 28, sSteFas1.1, whole genome shotgun sequence.
sequence version: NC_063411.1
sequence date: 2022-06-06
sequence: sequence
division: CON
label: NC_063411.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA844100
dblink: SAMN18022887
keyword: WGS
keyword: RefSeq
source: Stegostoma fasciatum
organism: Stegostoma fasciatum
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Stegostomatidae; Stegostoma.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM039254.1.\nAssembly name: sSteFas1.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Squalomix on 2022/02/17. The\noriginal whole-genome shotgun project has the accession\nJAFIRC000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Squalomix\nAssembly Date :: 22-FEB-2021\nAssembly Method :: Platanus v. 1.2.4; P_RNA_scaffolder v.\n commit 7941e0f on May 30, at github;\n 3D-DNA v. 180922\nAssembly Name :: sSteFas1.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 95.8x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Stegostoma fasciatum Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 43502945
topology: linear
so has quality: SO_0000987
location: 1..43502945
location: region:1-43502945:1
RO_0002162: 378071

NC_063411
type: RefSeq
SIO_000068: refseq

PRJNA844100
type: BioProject
SIO_000068: bioproject

SAMN18022887
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43502945:1
position: 43502945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-43502945:1:source
so part of: sequence
organism: Stegostoma fasciatum
mol type: genomic DNA
isolate: 6-17
chromosome: 28
sex: female
tissue type: blood
dev stage: adult
collection date: 2019-07-11

378071
type: Taxonomy
SIO_000068: taxonomy

LOC125465233
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125465233
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 67774..221906
location: region:67774-221906:1
so has part: feature:67774-221906:1:exon
subclass of: SO_0000010

125465233
type: Gene
SIO_000068: ncbigene

position:67774:1
position: 67774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221906:1
position: 221906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67774-221906:1:exon

LOC125465233
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465233
product: probable G-protein coupled receptor 139
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558503.1
SIO_010081: LOC125465233
subclass of: SO_0000673
so part of: LOC125465233
location: join(67774..68189,220978..221906)
location: region:67774-221906:1
so has part: feature:67774-68189:1:exon
so has part: feature:220978-221906:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:67774-68189:1:exon

position:68189:1
position: 68189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:220978-221906:1:exon

position:220978:1
position: 220978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125465233
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465233
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 139
translation: MDPNFTAMGHDVKTVHWHVGSIARRFSWELDYLSTHYEFLSLETRMYLILRIFEMVYYPILALVGASANLLTIVILSQGKCGLSKCPTRYLVSMAVADLLVIIIDLILRHIPIVYDEHFIFVKSIPVCNIHAIILFAVTDCSVWFTVAFTFDRFVAICCQKLKCKYCTESVAFMVLGTVTVLSCLKNIFWFFIFTVEYLLSNFPWFCFVRWEYLESPLWATIEFFHHILTPGVPFALVLLLNALTIRHIVVANRARKRLRSNSNGSKQKDLEMKTRKKSIILLFVISANFIVLWVMLLIYSVLERMHYLGYEVVMLPNFTREIGFILQLLNCCTNTCIYAMTQTKFREQMKIIVKYPFSSIVKLNDEK
SIO_010081: LOC125465233
subclass of: SO_0000673
so part of: LOC125465233
location: join(67988..68189,220978..221882)
location: region:67988-221882:1
so has part: feature:67988-68189:1:exon
so has part: feature:220978-221882:1:exon

XP_048414460.1
type: Protein
SIO_000068: ncbiprotein

position:67988:1
position: 67988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221882:1
position: 221882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67988-68189:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:220978-221882:1:exon

LOC125465243
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125465243
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 240277..301492
location: region:240277-301492:1
so has part: feature:240277-301492:1:exon
subclass of: SO_0000010

125465243
type: Gene
SIO_000068: ncbigene

position:240277:1
position: 240277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301492:1
position: 301492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240277-301492:1:exon

LOC125465243
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465243
product: ectonucleoside triphosphate diphosphohydrolase 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 75% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048558519.1
SIO_010081: LOC125465243
subclass of: SO_0000673
so part of: LOC125465243
location: join(240277..240386,261332..261468,273183..273342,281949..282179,299920..300057,301481..301492)
location: region:240277-301492:1
so has part: feature:240277-240386:1:exon
so has part: feature:261332-261468:1:exon
so has part: feature:273183-273342:1:exon
so has part: feature:281949-282179:1:exon
so has part: feature:299920-300057:1:exon
so has part: feature:301481-301492:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:240277-240386:1:exon

position:240386:1
position: 240386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:261332-261468:1:exon

position:261332:1
position: 261332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261468:1
position: 261468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:273183-273342:1:exon

position:273183:1
position: 273183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273342:1
position: 273342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:281949-282179:1:exon

position:281949:1
position: 281949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282179:1
position: 282179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:299920-300057:1:exon

position:299920:1
position: 299920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300057:1
position: 300057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:301481-301492:1:exon

position:301481:1
position: 301481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125465243
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465243
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ectonucleoside triphosphate diphosphohydrolase 3-like
translation: MILNVVRKTIQSYPFRFHEAWILTGAQEGSFGWITVNYLLRSFLQDSWEGIWIHPGHIQTYGTLDLGRLSTQLTFIPKGNIRNMPGKMNIYLYGYNYTIYTHSYLCYGQQQSIRKYIATLLKVNAAYPNEKRDQLRDYCISANYIFILLVNGYKFNPSTWENIVFNKKMWL
SIO_010081: LOC125465243
subclass of: SO_0000673
so part of: LOC125465243
location: join(273208..273342,281949..282179,299920..300057,301481..301492)
location: region:273208-301492:1
so has part: feature:273208-273342:1:exon
so has part: feature:281949-282179:1:exon
so has part: feature:299920-300057:1:exon
so has part: feature:301481-301492:1:exon

XP_048414476.1
type: Protein
SIO_000068: ncbiprotein

position:273208:1
position: 273208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273208-273342:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:281949-282179:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:299920-300057:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:301481-301492:1:exon

LOC125465244
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125465244
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(317878..463641)
location: region:317878-463641:-1
so has part: feature:317878-463641:-1:exon
subclass of: SO_0000010

125465244
type: Gene
SIO_000068: ncbigene

position:317878:-1
position: 317878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:463641:-1
position: 463641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317878-463641:-1:exon

LOC125465244
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465244
product: neutrophil cytosol factor 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048558521.1
SIO_010081: LOC125465244
subclass of: SO_0000673
so part of: LOC125465244
location: complement(join(317878..318212,320812..320935,321401..321506,333307..333452,336452..336571,343945..344001,345910..346048,353895..353917,362432..362491,362923..363030,370145..370279,407061..407169,408403..408485,458377..458437,463469..463641))
location: region:317878-463641:-1
so has part: feature:463469-463641:-1:exon
so has part: feature:458377-458437:-1:exon
so has part: feature:408403-408485:-1:exon
so has part: feature:407061-407169:-1:exon
so has part: feature:370145-370279:-1:exon
so has part: feature:362923-363030:-1:exon
so has part: feature:362432-362491:-1:exon
so has part: feature:353895-353917:-1:exon
so has part: feature:345910-346048:-1:exon
so has part: feature:343945-344001:-1:exon
so has part: feature:336452-336571:-1:exon
so has part: feature:333307-333452:-1:exon
so has part: feature:321401-321506:-1:exon
so has part: feature:320812-320935:-1:exon
so has part: feature:317878-318212:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:463469-463641:-1:exon

position:463469:-1
position: 463469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:458377-458437:-1:exon

position:458377:-1
position: 458377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458437:-1
position: 458437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:408403-408485:-1:exon

position:408403:-1
position: 408403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408485:-1
position: 408485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:407061-407169:-1:exon

position:407061:-1
position: 407061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:407169:-1
position: 407169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:370145-370279:-1:exon

position:370145:-1
position: 370145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370279:-1
position: 370279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:362923-363030:-1:exon

position:362923:-1
position: 362923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:363030:-1
position: 363030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:362432-362491:-1:exon

position:362432:-1
position: 362432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362491:-1
position: 362491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:353895-353917:-1:exon

position:353895:-1
position: 353895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353917:-1
position: 353917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:345910-346048:-1:exon

position:345910:-1
position: 345910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346048:-1
position: 346048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:343945-344001:-1:exon

position:343945:-1
position: 343945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344001:-1
position: 344001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:336452-336571:-1:exon

position:336452:-1
position: 336452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336571:-1
position: 336571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:333307-333452:-1:exon

position:333307:-1
position: 333307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333452:-1
position: 333452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:321401-321506:-1:exon

position:321401:-1
position: 321401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321506:-1
position: 321506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:320812-320935:-1:exon

position:320812:-1
position: 320812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320935:-1
position: 320935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:317878-318212:-1:exon

position:318212:-1
position: 318212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125465244
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465244
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neutrophil cytosol factor 2-like
translation: MAAQHGLRPGLEPGSESGTGPRSLSPASPGGWRRVTERFPGLGWTLADSRCFMSMSLTVQHIIAKDETEAFATSCAEQAFDQTIAKDDRLAICFFQRGAVHLRLEMFDEALGDFKHALNNLRSNSVIDYSQLGLRHRLYTWEVLYNLAAVQSRLDQWLEAQQTLEDALRLRAKGTNTELDRALSMVKSSKTFEPIDVPEGIVFRPRKHEVDELNLKDFLGTPKVVSSIDPNDSFAGFKPLCPPKLGEQVVRGTRGYHQVLFNFAPKTASEIEAKAGSIVFVMENGEDGWSTVIADNKKGLIPTTYLEVWARNRRNKLKQGSGNVSQTPPHVPASRQTETEGETHSKTLSSSAGSWKDCSLADSVIIKVHYEYTLATRMKPGISYSEFVNVFKSKLGRRSGQIQLSYKEKEKQELVEIRGDEDLNKVWNQIVDRRLTLWCKCKDPLSGRKVLYQTQALYDYNGHGAEDVEFNEGDIIDVLSEVNEEWLEGHSNGNIGIFPRCFVRPRGSAMAETRKIDHSEDSVHTQAVK
SIO_010081: LOC125465244
subclass of: SO_0000673
so part of: LOC125465244
location: complement(join(318067..318212,320812..320935,321401..321506,333307..333452,336452..336571,343945..344001,345910..346048,353895..353917,362432..362491,362923..363030,370145..370279,407061..407169,408403..408485,458377..458437,463469..463641))
location: region:318067-463641:-1
so has part: feature:463469-463641:-1:exon
so has part: feature:458377-458437:-1:exon
so has part: feature:408403-408485:-1:exon
so has part: feature:407061-407169:-1:exon
so has part: feature:370145-370279:-1:exon
so has part: feature:362923-363030:-1:exon
so has part: feature:362432-362491:-1:exon
so has part: feature:353895-353917:-1:exon
so has part: feature:345910-346048:-1:exon
so has part: feature:343945-344001:-1:exon
so has part: feature:336452-336571:-1:exon
so has part: feature:333307-333452:-1:exon
so has part: feature:321401-321506:-1:exon
so has part: feature:320812-320935:-1:exon
so has part: feature:318067-318212:-1:exon

XP_048414478.1
type: Protein
SIO_000068: ncbiprotein

position:318067:-1
position: 318067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:463469-463641:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:458377-458437:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:408403-408485:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:407061-407169:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:370145-370279:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:362923-363030:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:362432-362491:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:353895-353917:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:345910-346048:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:343945-344001:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:336452-336571:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:333307-333452:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:321401-321506:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:320812-320935:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:318067-318212:-1:exon

nrarpa
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: nrarpa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(463445..464141)
location: region:463445-464141:-1
so has part: feature:463445-464141:-1:exon
subclass of: SO_0000010

125465516
type: Gene
SIO_000068: ncbigene

position:463445:-1
position: 463445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464141:-1
position: 464141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:463445-464141:-1:exon

nrarpa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: nrarpa
product: NOTCH regulated ankyrin repeat protein a
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048559129.1
SIO_010081: nrarpa
subclass of: SO_0000673
so part of: nrarpa
location: complement(463445..464141)
location: region:463445-464141:-1
so has part: feature:463445-464141:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:463445-464141:-1:exon

nrarpa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: nrarpa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: notch-regulated ankyrin repeat-containing protein A
translation: MSQAELSPAAAPQRMFQEAVRRGNTRELQSLLQNMADCPFNVNSFGPEGQTALHQSVIAGNLELVKLLVKFGADIRLANRDGWSALHIAAFGGHQDIVLYLITKAKYGASGAR
SIO_010081: nrarpa
subclass of: SO_0000673
so part of: nrarpa
location: complement(463741..464082)
location: region:463741-464082:-1
so has part: feature:463741-464082:-1:exon

XP_048415086.1
type: Protein
SIO_000068: ncbiprotein

position:463741:-1
position: 463741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464082:-1
position: 464082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:463741-464082:-1:exon

exd3
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: exd3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(478132..1375696)
location: region:478132-1375696:-1
so has part: feature:478132-1375696:-1:exon
subclass of: SO_0000010

125465376
type: Gene
SIO_000068: ncbigene

position:478132:-1
position: 478132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1375696:-1
position: 1375696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:478132-1375696:-1:exon

exd3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: exd3
product: exonuclease 3'-5' domain containing 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048558801.1
SIO_010081: exd3
subclass of: SO_0000673
so part of: exd3
location: complement(join(478132..479908,517768..517861,648789..648920,657460..657513,702639..702815,703285..703451,704315..704522,706383..706492,708446..708659,712290..712440,723081..723247,728760..728798,729504..729577,736828..736928,754447..754586,765772..765825,776712..776867,777859..778038,814118..814182,830854..830901,842296..842354,1366447..1366496,1366918..1366992,1375519..1375696))
location: region:478132-1375696:-1
so has part: feature:1375519-1375696:-1:exon
so has part: feature:1366918-1366992:-1:exon
so has part: feature:1366447-1366496:-1:exon
so has part: feature:842296-842354:-1:exon
so has part: feature:830854-830901:-1:exon
so has part: feature:814118-814182:-1:exon
so has part: feature:777859-778038:-1:exon
so has part: feature:776712-776867:-1:exon
so has part: feature:765772-765825:-1:exon
so has part: feature:754447-754586:-1:exon
so has part: feature:736828-736928:-1:exon
so has part: feature:729504-729577:-1:exon
so has part: feature:728760-728798:-1:exon
so has part: feature:723081-723247:-1:exon
so has part: feature:712290-712440:-1:exon
so has part: feature:708446-708659:-1:exon
so has part: feature:706383-706492:-1:exon
so has part: feature:704315-704522:-1:exon
so has part: feature:703285-703451:-1:exon
so has part: feature:702639-702815:-1:exon
so has part: feature:657460-657513:-1:exon
so has part: feature:648789-648920:-1:exon
so has part: feature:517768-517861:-1:exon
so has part: feature:478132-479908:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1375519-1375696:-1:exon

position:1375519:-1
position: 1375519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1366918-1366992:-1:exon

position:1366918:-1
position: 1366918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1366992:-1
position: 1366992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1366447-1366496:-1:exon

position:1366447:-1
position: 1366447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1366496:-1
position: 1366496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:842296-842354:-1:exon

position:842296:-1
position: 842296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:842354:-1
position: 842354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:830854-830901:-1:exon

position:830854:-1
position: 830854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:830901:-1
position: 830901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:814118-814182:-1:exon

position:814118:-1
position: 814118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:814182:-1
position: 814182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:777859-778038:-1:exon

position:777859:-1
position: 777859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:778038:-1
position: 778038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:776712-776867:-1:exon

position:776712:-1
position: 776712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:776867:-1
position: 776867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:765772-765825:-1:exon

position:765772:-1
position: 765772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:765825:-1
position: 765825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:754447-754586:-1:exon

position:754447:-1
position: 754447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:754586:-1
position: 754586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:736828-736928:-1:exon

position:736828:-1
position: 736828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:736928:-1
position: 736928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:729504-729577:-1:exon

position:729504:-1
position: 729504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:729577:-1
position: 729577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:728760-728798:-1:exon

position:728760:-1
position: 728760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:728798:-1
position: 728798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:723081-723247:-1:exon

position:723081:-1
position: 723081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:723247:-1
position: 723247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:712290-712440:-1:exon

position:712290:-1
position: 712290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712440:-1
position: 712440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:708446-708659:-1:exon

position:708446:-1
position: 708446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:708659:-1
position: 708659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:706383-706492:-1:exon

position:706383:-1
position: 706383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:706492:-1
position: 706492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:704315-704522:-1:exon

position:704315:-1
position: 704315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:704522:-1
position: 704522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:703285-703451:-1:exon

position:703285:-1
position: 703285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:703451:-1
position: 703451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:702639-702815:-1:exon

position:702639:-1
position: 702639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:702815:-1
position: 702815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:657460-657513:-1:exon

position:657460:-1
position: 657460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:657513:-1
position: 657513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:648789-648920:-1:exon

position:648789:-1
position: 648789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:648920:-1
position: 648920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:517768-517861:-1:exon

position:517768:-1
position: 517768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:517861:-1
position: 517861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:478132-479908:-1:exon

position:479908:-1
position: 479908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

exd3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: exd3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exonuclease mut-7 homolog
translation: MQSGNRICCITWIQGTNLIMSDQCTGIEQLNTLTTEPGMPQGLDPLHLLHILQALWTKKEIHELPEAARRGFASLTDPLEGLLVMLENCHDWRNWRKGKPQTLAHYIIDQLCNWIKDNGRVPQPTKLQARVFSLLTEVPANMLDQLASLYEVDKADRSSQLGLINGLCIKGKYKEAALLSIKLGLQPELDMEQVCIPLLLQDKVSLVEAYVADCPGLQRALLQLLDSWCHSMANIADIQRRYEKLSHLRWNKLNRKALSKLVIRLMELYDINPEFCPNVMNQRQVASIKYLLYKRFMERSMSEENWSEHIEAVVGYNPQLRLQFVTLLARYTDIDTVARWVLRLNVPREKLAYHVAERLKQLERVKAISLENHFVEESIEEIQNKKKFYYQLPIPTECIHFLDHLDQLKSCAARVLQAGGILGIDMEWRPTFGVLTRSRVSLIQIAMKDCVYLLDLPQLVNQSESECRRPELTQFIQTLFTDQTITKLGYATTGDLRTLSVAYPMLKDVVQHTAGVLDLLNVHKELQKMPCRRQDKSRGVEVLMSEDGVNCGNSHGEKGLSLLVQCVLGKSLDKTEQLSNWEKRPLRPQQVIYAASDAYCLLDVYDALHRDPQRFGLNCSFEEFLMFKMEKKTRGMKEKKNKSSPTLPFQCAQIPQPNSLKASSFPPLSPSEFNVVCDNMLQGLGRYLRCLGVDVKILENDDHHRKAAEIACKDNRFILTCGLPYHALRSQVAEGRCLSLNCSDKAKDQAITVLKHFNVQITPKDIFSRCQVCNGAEYLKLPVEEMRQAVQLKACSGRAMCTDPPTAMRSSSSADQAVVSPQTDAGNYLGQAGRCSYNPRCHWADKSRLDLKTLKFTSGAVLQVETIPPGILDKVVMFYCCVSCGKVFWEGSHFNRIVSQFQEVLHVTDKKTFYHP
SIO_010081: exd3
subclass of: SO_0000673
so part of: exd3
location: complement(join(479565..479908,517768..517861,648789..648920,657460..657513,702639..702815,703285..703451,704315..704522,706383..706492,708446..708659,712290..712440,723081..723247,728760..728798,729504..729577,736828..736928,754447..754586,765772..765825,776712..776867,777859..778038,814118..814182,830854..830901,842296..842354,1366447..1366463))
location: region:479565-1366463:-1
so has part: feature:1366447-1366463:-1:exon
so has part: feature:842296-842354:-1:exon
so has part: feature:830854-830901:-1:exon
so has part: feature:814118-814182:-1:exon
so has part: feature:777859-778038:-1:exon
so has part: feature:776712-776867:-1:exon
so has part: feature:765772-765825:-1:exon
so has part: feature:754447-754586:-1:exon
so has part: feature:736828-736928:-1:exon
so has part: feature:729504-729577:-1:exon
so has part: feature:728760-728798:-1:exon
so has part: feature:723081-723247:-1:exon
so has part: feature:712290-712440:-1:exon
so has part: feature:708446-708659:-1:exon
so has part: feature:706383-706492:-1:exon
so has part: feature:704315-704522:-1:exon
so has part: feature:703285-703451:-1:exon
so has part: feature:702639-702815:-1:exon
so has part: feature:657460-657513:-1:exon
so has part: feature:648789-648920:-1:exon
so has part: feature:517768-517861:-1:exon
so has part: feature:479565-479908:-1:exon

XP_048414758.1
type: Protein
SIO_000068: ncbiprotein

position:479565:-1
position: 479565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1366463:-1
position: 1366463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1366447-1366463:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:842296-842354:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:830854-830901:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:814118-814182:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:777859-778038:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:776712-776867:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:765772-765825:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:754447-754586:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:736828-736928:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:729504-729577:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:728760-728798:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:723081-723247:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:712290-712440:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:708446-708659:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:706383-706492:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:704315-704522:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:703285-703451:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:702639-702815:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:657460-657513:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:648789-648920:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:517768-517861:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:479565-479908:-1:exon

ajm1
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: ajm1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 879623..883912
location: region:879623-883912:1
so has part: feature:879623-883912:1:exon
subclass of: SO_0000010

125465375
type: Gene
SIO_000068: ncbigene

position:879623:1
position: 879623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:883912:1
position: 883912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:879623-883912:1:exon

ajm1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: ajm1
product: apical junction component 1 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048558800.1
SIO_010081: ajm1
subclass of: SO_0000673
so part of: ajm1
location: 879623..883912
location: region:879623-883912:1
so has part: feature:879623-883912:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:879623-883912:1:exon

ajm1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: ajm1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apical junction component 1 homolog
translation: MTRTDPPDILVSTVYREIKVSPMPGEPKVYKAQRKCDASKLSSSAQDSQRYVHKRQCRSFDFLQSLDGQADSGAPMEDYSSGRADQQPTSPEPAWDSLGRQVYYRSSAPEIVANRLCAHSGEPREAFRPETKKRGRSKSAPRVKTTYRPVPVEVGSPELSRRGREALRGHRDSHKRMEASPRRDLPHPARTRINEVHPIKLQPQRGDASLYSPLFVSESAEGYEEGQGAKPGAGAHVRYRVDMKPEDPVMTPSSRTWKTPQKQSTVGSWHGQPGRSLTVPANRRAARTHSPSESFSGDYWTLTAHNNCSPHRYYHQDEGRRGIPQLVQTVPGFSQQPYPEPRRQSRPGPQPNIYCTEERARPSQHRYTSPMHYHDWWGTYRAAHAHQGYISPCPPYWEGRAGTLSPHGSYYGIDQHRLGSESRYYSKSWDNILSPSRHRAEFPATDCRSYETLPLQERPGRSAESRRRPTVVNLSRSPQRYAALSLSESSLADKLQGDGGRGGQGRAWYITPEITITDNELRANGPAQARGRPEPSRRQALDGGNGLSASFNDLLSCNLEPGLGPASSSAVGGGGRGGGGCPHRPGKQQQLDDVLADLVIDTCKTPAAKPSDSDALVDQLRRLIAAEDLSGDRGVRTVLVHTSEPQKAKAHPGMLGPGPGPEPHGLGLGLGLGPGLSRSPSYPSPCNGPPQERGASDDVDTMMCSNLKCGLTETLFNARLYFKSCHSCYTYYCSRNCRKDDWEMHKEACVYGRVSSTCKRVLRSCRENQAAHKAFSRIARMGYLSRGKGVLFQGFPNPGSADNFLQYGLESLLLAPTYLSLRELDGYAEPLGEYLREIQEAAQLYDPDECFLLNVSIALGQKVPENPSPRLQTPTVRRFAKIALASSSPEKKGKAFRADDEMETLILTPPPGTSDIAQEDEAGRRAREVCFINVQRELRIRGVFLRHEYPQIYQDLCEFVENNKRFTPTTIYPIDKRTGKQFMCMIMAASEPLTLEWVRKPNLLEDMM
SIO_010081: ajm1
subclass of: SO_0000673
so part of: ajm1
location: 879677..882703
location: region:879677-882703:1
so has part: feature:879677-882703:1:exon

XP_048414757.1
type: Protein
SIO_000068: ncbiprotein

position:879677:1
position: 879677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:882703:1
position: 882703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:879677-882703:1:exon

phpt1
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: phpt1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 917189..927630
location: region:917189-927630:1
so has part: feature:917189-927630:1:exon
subclass of: SO_0000010

125465387
type: Gene
SIO_000068: ncbigene

position:917189:1
position: 917189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:927630:1
position: 927630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:917189-927630:1:exon

phpt1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: phpt1
product: phosphohistidine phosphatase 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558816.1
SIO_010081: phpt1
subclass of: SO_0000673
so part of: phpt1
location: join(917189..917757,924745..924869,927387..927630)
location: region:917189-927630:1
so has part: feature:917189-917757:1:exon
so has part: feature:924745-924869:1:exon
so has part: feature:927387-927630:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:917189-917757:1:exon

position:917757:1
position: 917757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:924745-924869:1:exon

position:924745:1
position: 924745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:924869:1
position: 924869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:927387-927630:1:exon

position:927387:1
position: 927387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

phpt1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: phpt1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 14 kDa phosphohistidine phosphatase
translation: MALTLAELEDVLIDPGGVFKYVLIRVWSESDNPQEKTIVRGWASAEYHADIYEQVSSWIQKHGLQCECQGGGRINHNSAKKTIHVYGYSMGYGRAKHEITTEILKTKYLDYNVTWANEGY
SIO_010081: phpt1
subclass of: SO_0000673
so part of: phpt1
location: join(917613..917757,924745..924869,927387..927479)
location: region:917613-927479:1
so has part: feature:917613-917757:1:exon
so has part: feature:924745-924869:1:exon
so has part: feature:927387-927479:1:exon

XP_048414773.1
type: Protein
SIO_000068: ncbiprotein

position:917613:1
position: 917613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:927479:1
position: 927479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:917613-917757:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:924745-924869:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:927387-927479:1:exon

mamdc4
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: mamdc4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 948067..972621
location: region:948067-972621:1
so has part: feature:948067-972621:1:exon
subclass of: SO_0000010

125465377
type: Gene
SIO_000068: ncbigene

position:948067:1
position: 948067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:972621:1
position: 972621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:948067-972621:1:exon

mamdc4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: mamdc4
product: MAM domain containing 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048558803.1
SIO_010081: mamdc4
subclass of: SO_0000673
so part of: mamdc4
location: join(948067..948224,949718..949852,951658..951792,953409..953536,954999..955209,958500..958634,961767..961891,962287..962377,963242..963388,964267..964398,968354..968481,970367..970484,970930..971038)
location: region:948067-971038:1
so has part: feature:948067-948224:1:exon
so has part: feature:949718-949852:1:exon
so has part: feature:951658-951792:1:exon
so has part: feature:953409-953536:1:exon
so has part: feature:954999-955209:1:exon
so has part: feature:958500-958634:1:exon
so has part: feature:961767-961891:1:exon
so has part: feature:962287-962377:1:exon
so has part: feature:963242-963388:1:exon
so has part: feature:964267-964398:1:exon
so has part: feature:968354-968481:1:exon
so has part: feature:970367-970484:1:exon
so has part: feature:970930-971038:1:exon

position:971038:1
position: 971038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:948067-948224:1:exon

position:948224:1
position: 948224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:949718-949852:1:exon

position:949718:1
position: 949718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:949852:1
position: 949852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:951658-951792:1:exon

position:951658:1
position: 951658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:951792:1
position: 951792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:953409-953536:1:exon

position:953409:1
position: 953409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:953536:1
position: 953536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:954999-955209:1:exon

position:954999:1
position: 954999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:955209:1
position: 955209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:958500-958634:1:exon

position:958500:1
position: 958500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:958634:1
position: 958634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:961767-961891:1:exon

position:961767:1
position: 961767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:961891:1
position: 961891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:962287-962377:1:exon

position:962287:1
position: 962287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:962377:1
position: 962377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:963242-963388:1:exon

position:963242:1
position: 963242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:963388:1
position: 963388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:964267-964398:1:exon

position:964267:1
position: 964267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:964398:1
position: 964398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:968354-968481:1:exon

position:968354:1
position: 968354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:968481:1
position: 968481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:970367-970484:1:exon

position:970367:1
position: 970367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:970484:1
position: 970484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:970930-971038:1:exon

position:970930:1
position: 970930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

mamdc4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: mamdc4
product: MAM domain containing 4, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558804.1
SIO_010081: mamdc4
subclass of: SO_0000673
so part of: mamdc4
location: join(948068..948224,949718..949852,951658..951792,953409..953536,954999..955209,958500..958634,961767..961891,962287..962377,963242..963388,964267..964398,968354..968481,970367..970484,972087..972621)
location: region:948068-972621:1
so has part: feature:948068-948224:1:exon
so has part: feature:949718-949852:1:exon
so has part: feature:951658-951792:1:exon
so has part: feature:953409-953536:1:exon
so has part: feature:954999-955209:1:exon
so has part: feature:958500-958634:1:exon
so has part: feature:961767-961891:1:exon
so has part: feature:962287-962377:1:exon
so has part: feature:963242-963388:1:exon
so has part: feature:964267-964398:1:exon
so has part: feature:968354-968481:1:exon
so has part: feature:970367-970484:1:exon
so has part: feature:972087-972621:1:exon

position:948068:1
position: 948068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:948068-948224:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:949718-949852:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:951658-951792:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:953409-953536:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:954999-955209:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:958500-958634:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:961767-961891:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:962287-962377:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:963242-963388:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:964267-964398:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:968354-968481:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:970367-970484:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:972087-972621:1:exon

position:972087:1
position: 972087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

mamdc4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: mamdc4
product: MAM domain containing 4, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558802.1
SIO_010081: mamdc4
subclass of: SO_0000673
so part of: mamdc4
location: join(948069..948224,949718..949852,951658..951792,953409..953536,954999..955209,958500..958634,961767..961891,962287..962377,963242..963388,964267..964398,968354..968481,970367..970484,971030..972621)
location: region:948069-972621:1
so has part: feature:948069-948224:1:exon
so has part: feature:949718-949852:1:exon
so has part: feature:951658-951792:1:exon
so has part: feature:953409-953536:1:exon
so has part: feature:954999-955209:1:exon
so has part: feature:958500-958634:1:exon
so has part: feature:961767-961891:1:exon
so has part: feature:962287-962377:1:exon
so has part: feature:963242-963388:1:exon
so has part: feature:964267-964398:1:exon
so has part: feature:968354-968481:1:exon
so has part: feature:970367-970484:1:exon
so has part: feature:971030-972621:1:exon

position:948069:1
position: 948069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:948069-948224:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:949718-949852:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:951658-951792:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:953409-953536:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:954999-955209:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:958500-958634:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:961767-961891:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:962287-962377:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:963242-963388:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:964267-964398:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:968354-968481:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:970367-970484:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:971030-972621:1:exon

position:971030:1
position: 971030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

mamdc4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: mamdc4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apical endosomal glycoprotein isoform X3
translation: MFLAGIISLIVLPQSLLAISCNFEVDFCEWKQNATDILQWIRDNGSELLKYAPMYDHTLNGKGYYLFIHNLSASLPNHTARLSTILQTATSANQCFSFWYHMYGPSIGTLSLKVQQEGRPEELLWTRTGTNGNQWRWAFHTIPPQNKHFQLIFEASLGAGIGDIAIDDVSVVGGECDTQGLCSFEADSCQYTSPGMLSWNRLIANMSNRPVTDHTTETTEGHFMLADTSAEILQSSHALLVSPVQEPMEASGCFQFWFQMNGDHPGTLNVYVEEETQRKLKKWSMNTGQDQMWNLGSVTIQTAHTWKLMFEAIGGGAPVSHIAIDDVKLDHTECPEIGACDFERDLCSWKNVLNPKLDSMDWDWSNGQTPSSFKGPEVDNTKKDPQGHYMFVDFEALQIDDVAWLLSEHFPPTKGSCLSFYYSTNISEQLMHGVLKVFRYQMDQESVIWEAKGTQSKEWWPINITMESSTVFQIGFGAVKSNKAEVGYVAIDDIMYNRGVNCHGIQTDGAIWDLEIFHWLF
SIO_010081: mamdc4
subclass of: SO_0000673
so part of: mamdc4
location: join(948173..948224,949718..949852,951658..951792,953409..953536,954999..955209,958500..958634,961767..961891,962287..962377,963242..963388,964267..964398,968354..968481,970367..970484,972087..972115)
location: region:948173-972115:1
so has part: feature:948173-948224:1:exon
so has part: feature:949718-949852:1:exon
so has part: feature:951658-951792:1:exon
so has part: feature:953409-953536:1:exon
so has part: feature:954999-955209:1:exon
so has part: feature:958500-958634:1:exon
so has part: feature:961767-961891:1:exon
so has part: feature:962287-962377:1:exon
so has part: feature:963242-963388:1:exon
so has part: feature:964267-964398:1:exon
so has part: feature:968354-968481:1:exon
so has part: feature:970367-970484:1:exon
so has part: feature:972087-972115:1:exon

XP_048414761.1
type: Protein
SIO_000068: ncbiprotein

position:948173:1
position: 948173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:972115:1
position: 972115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:948173-948224:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:949718-949852:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:951658-951792:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:953409-953536:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:954999-955209:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:958500-958634:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:961767-961891:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:962287-962377:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:963242-963388:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:964267-964398:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:968354-968481:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:970367-970484:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:972087-972115:1:exon

mamdc4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: mamdc4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apical endosomal glycoprotein isoform X1
translation: MFLAGIISLIVLPQSLLAISCNFEVDFCEWKQNATDILQWIRDNGSELLKYAPMYDHTLNGKGYYLFIHNLSASLPNHTARLSTILQTATSANQCFSFWYHMYGPSIGTLSLKVQQEGRPEELLWTRTGTNGNQWRWAFHTIPPQNKHFQLIFEASLGAGIGDIAIDDVSVVGGECDTQGLCSFEADSCQYTSPGMLSWNRLIANMSNRPVTDHTTETTEGHFMLADTSAEILQSSHALLVSPVQEPMEASGCFQFWFQMNGDHPGTLNVYVEEETQRKLKKWSMNTGQDQMWNLGSVTIQTAHTWKLMFEAIGGGAPVSHIAIDDVKLDHTECPEIGACDFERDLCSWKNVLNPKLDSMDWDWSNGQTPSSFKGPEVDNTKKDPQGHYMFVDFEALQIDDVAWLLSEHFPPTKGSCLSFYYSTNISEQLMHGVLKVFRYQMDQESVIWEAKGTQSKEWWPINITMESSTVFQIGFGAVKSNKAEVGYVAIDDIMYNRGVNCHGIQTDGAIWGSSHQTAGIVASVIIVLAVVVSLTVGLVYWQKKQNSSPGSLSRQFGFDNLFYRSQN
SIO_010081: mamdc4
subclass of: SO_0000673
so part of: mamdc4
location: join(948173..948224,949718..949852,951658..951792,953409..953536,954999..955209,958500..958634,961767..961891,962287..962377,963242..963388,964267..964398,968354..968481,970367..970484,971030..971199)
location: region:948173-971199:1
so has part: feature:948173-948224:1:exon
so has part: feature:949718-949852:1:exon
so has part: feature:951658-951792:1:exon
so has part: feature:953409-953536:1:exon
so has part: feature:954999-955209:1:exon
so has part: feature:958500-958634:1:exon
so has part: feature:961767-961891:1:exon
so has part: feature:962287-962377:1:exon
so has part: feature:963242-963388:1:exon
so has part: feature:964267-964398:1:exon
so has part: feature:968354-968481:1:exon
so has part: feature:970367-970484:1:exon
so has part: feature:971030-971199:1:exon

XP_048414759.1
type: Protein
SIO_000068: ncbiprotein

position:971199:1
position: 971199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:948173-948224:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:949718-949852:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:951658-951792:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:953409-953536:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:954999-955209:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:958500-958634:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:961767-961891:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:962287-962377:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:963242-963388:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:964267-964398:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:968354-968481:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:970367-970484:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:971030-971199:1:exon

mamdc4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: mamdc4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apical endosomal glycoprotein isoform X2
translation: MFLAGIISLIVLPQSLLAISCNFEVDFCEWKQNATDILQWIRDNGSELLKYAPMYDHTLNGKGYYLFIHNLSASLPNHTARLSTILQTATSANQCFSFWYHMYGPSIGTLSLKVQQEGRPEELLWTRTGTNGNQWRWAFHTIPPQNKHFQLIFEASLGAGIGDIAIDDVSVVGGECDTQGLCSFEADSCQYTSPGMLSWNRLIANMSNRPVTDHTTETTEGHFMLADTSAEILQSSHALLVSPVQEPMEASGCFQFWFQMNGDHPGTLNVYVEEETQRKLKKWSMNTGQDQMWNLGSVTIQTAHTWKLMFEAIGGGAPVSHIAIDDVKLDHTECPEIGACDFERDLCSWKNVLNPKLDSMDWDWSNGQTPSSFKGPEVDNTKKDPQGHYMFVDFEALQIDDVAWLLSEHFPPTKGSCLSFYYSTNISEQLMHGVLKVFRYQMDQESVIWEAKGTQSKEWWPINITMESSTVFQIGFGAVKSNKAEVGYVAIDDIMYNRGVNCHGIQTDGAIWDPVHNIQGYRGKLFLHWEDGWC
SIO_010081: mamdc4
subclass of: SO_0000673
so part of: mamdc4
location: join(948173..948224,949718..949852,951658..951792,953409..953536,954999..955209,958500..958634,961767..961891,962287..962377,963242..963388,964267..964398,968354..968481,970367..970484,970930..970997)
location: region:948173-970997:1
so has part: feature:948173-948224:1:exon
so has part: feature:949718-949852:1:exon
so has part: feature:951658-951792:1:exon
so has part: feature:953409-953536:1:exon
so has part: feature:954999-955209:1:exon
so has part: feature:958500-958634:1:exon
so has part: feature:961767-961891:1:exon
so has part: feature:962287-962377:1:exon
so has part: feature:963242-963388:1:exon
so has part: feature:964267-964398:1:exon
so has part: feature:968354-968481:1:exon
so has part: feature:970367-970484:1:exon
so has part: feature:970930-970997:1:exon

XP_048414760.1
type: Protein
SIO_000068: ncbiprotein

position:970997:1
position: 970997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:948173-948224:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:949718-949852:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:951658-951792:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:953409-953536:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:954999-955209:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:958500-958634:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:961767-961891:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:962287-962377:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:963242-963388:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:964267-964398:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:968354-968481:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:970367-970484:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:970930-970997:1:exon

trub2
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: trub2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 976547..994572
location: region:976547-994572:1
so has part: feature:976547-994572:1:exon
subclass of: SO_0000010

125465383
type: Gene
SIO_000068: ncbigene

position:976547:1
position: 976547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:994572:1
position: 994572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:976547-994572:1:exon

trub2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 378071
gene: trub2
product: TruB pseudouridine (psi) synthase family member 2, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007250229.1
SIO_010081: trub2
so part of: trub2
location: join(976547..976752,977419..977550,983500..983574,983788..983849,985491..985572,986365..986437,987600..987736,989305..989897,992575..994572)
location: region:976547-994572:1
so has part: feature:976547-976752:1:exon
so has part: feature:977419-977550:1:exon
so has part: feature:983500-983574:1:exon
so has part: feature:983788-983849:1:exon
so has part: feature:985491-985572:1:exon
so has part: feature:986365-986437:1:exon
so has part: feature:987600-987736:1:exon
so has part: feature:989305-989897:1:exon
so has part: feature:992575-994572:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:976547-976752:1:exon

position:976752:1
position: 976752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:977419-977550:1:exon

position:977419:1
position: 977419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:977550:1
position: 977550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:983500-983574:1:exon

position:983500:1
position: 983500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983574:1
position: 983574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:983788-983849:1:exon

position:983788:1
position: 983788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983849:1
position: 983849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:985491-985572:1:exon

position:985491:1
position: 985491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:985572:1
position: 985572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:986365-986437:1:exon

position:986365:1
position: 986365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:986437:1
position: 986437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:987600-987736:1:exon

position:987600:1
position: 987600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:987736:1
position: 987736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:989305-989897:1:exon

position:989305:1
position: 989305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:989897:1
position: 989897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:992575-994572:1:exon

position:992575:1
position: 992575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

trub2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: trub2
product: TruB pseudouridine (psi) synthase family member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_048558809.1
SIO_010081: trub2
subclass of: SO_0000673
so part of: trub2
location: join(976547..976752,977419..977550,983500..983574,983788..983849,985491..985572,986365..986437,987600..987736,989305..990732)
location: region:976547-990732:1
so has part: feature:976547-976752:1:exon
so has part: feature:977419-977550:1:exon
so has part: feature:983500-983574:1:exon
so has part: feature:983788-983849:1:exon
so has part: feature:985491-985572:1:exon
so has part: feature:986365-986437:1:exon
so has part: feature:987600-987736:1:exon
so has part: feature:989305-990732:1:exon

position:990732:1
position: 990732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:976547-976752:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:977419-977550:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:983500-983574:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:983788-983849:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:985491-985572:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:986365-986437:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:987600-987736:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:989305-990732:1:exon

trub2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: trub2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial mRNA pseudouridine synthase TRUB2
translation: MAVSLRSALQRLHGMFAVYKPPGVHWKQLRDTVETKLLNELNSLEQPVVQQQIRFVPSVIKGENGNETHLTVTQVPVLADHPRVTGPKFVGVKVGAGHRLDLQSSGVLVLGVGNGNKQLNRLYHCHLTKEYIVKGSFGTATEDFSNTGRVIERTTYDHITRDRLERIIAVIQGSHQRALLIYSDVDLKSQEAYELASRGLLRPVNKSPPIITAIRCVHFSPPSFTLEIQCLHETQQYLRKVVHEIGLELKSSAVCTHVRRTRDAIFTVANALIRTQWDLPSILAAVQASRLKVEAKLHEQSWRLLESSEEDMYTVVKARVLEKGNHCPGSTQLGD
SIO_010081: trub2
subclass of: SO_0000673
so part of: trub2
location: join(976635..976752,977419..977550,983500..983574,983788..983849,985491..985572,986365..986437,987600..987736,989305..989633)
location: region:976635-989633:1
so has part: feature:976635-976752:1:exon
so has part: feature:977419-977550:1:exon
so has part: feature:983500-983574:1:exon
so has part: feature:983788-983849:1:exon
so has part: feature:985491-985572:1:exon
so has part: feature:986365-986437:1:exon
so has part: feature:987600-987736:1:exon
so has part: feature:989305-989633:1:exon

XP_048414766.1
type: Protein
SIO_000068: ncbiprotein

position:976635:1
position: 976635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:989633:1
position: 989633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:976635-976752:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:977419-977550:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:983500-983574:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:983788-983849:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:985491-985572:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:986365-986437:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:987600-987736:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:989305-989633:1:exon

coq4
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: coq4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(990810..1004417)
location: region:990810-1004417:-1
so has part: feature:990810-1004417:-1:exon
subclass of: SO_0000010

125465384
type: Gene
SIO_000068: ncbigene

position:990810:-1
position: 990810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1004417:-1
position: 1004417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:990810-1004417:-1:exon

coq4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: coq4
product: coenzyme Q4 homolog (S. cerevisiae)
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_048558810.1
SIO_010081: coq4
subclass of: SO_0000673
so part of: coq4
location: complement(join(990810..991645,992304..992397,994880..995009,1000977..1001079,1002657..1002753,1003954..1004109,1004185..1004417))
location: region:990810-1004417:-1
so has part: feature:1004185-1004417:-1:exon
so has part: feature:1003954-1004109:-1:exon
so has part: feature:1002657-1002753:-1:exon
so has part: feature:1000977-1001079:-1:exon
so has part: feature:994880-995009:-1:exon
so has part: feature:992304-992397:-1:exon
so has part: feature:990810-991645:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1004185-1004417:-1:exon

position:1004185:-1
position: 1004185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1003954-1004109:-1:exon

position:1003954:-1
position: 1003954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1004109:-1
position: 1004109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1002657-1002753:-1:exon

position:1002657:-1
position: 1002657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1002753:-1
position: 1002753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1000977-1001079:-1:exon

position:1000977:-1
position: 1000977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1001079:-1
position: 1001079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:994880-995009:-1:exon

position:994880:-1
position: 994880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:995009:-1
position: 995009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:992304-992397:-1:exon

position:992304:-1
position: 992304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:992397:-1
position: 992397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:990810-991645:-1:exon

position:991645:-1
position: 991645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

coq4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: coq4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquinone biosynthesis protein COQ4 homolog, mitochondrial
translation: MLRSRARGLALNLSRGLHGLSGRGGRLSPGLRLASGSVRTAATVSAGLGEGVSPEAGAREQEAVHSRRYQSHIPSSRLQKLLLASGSALMALYNPYRHDMVAVLGETTGLLAIQKLRDRMQNHPEGFQILQERPRISTTTLDLVSLRELPEGTFGREYVRFLDVNRVTPDSRMPVKFVDDEELAYVIQRYREVHDFMHTLLGMPTNILGEVAVKWFEAVQTGLPMCILGAVFGPLHLSARNIQVLVTDLIPWAVRCGRTAQCMMNFYYENRLEQSLESLREEIGILPPPTIQS
SIO_010081: coq4
subclass of: SO_0000673
so part of: coq4
location: complement(join(991483..991645,992304..992397,994880..995009,1000977..1001079,1002657..1002753,1003954..1004109,1004185..1004323))
location: region:991483-1004323:-1
so has part: feature:1004185-1004323:-1:exon
so has part: feature:1003954-1004109:-1:exon
so has part: feature:1002657-1002753:-1:exon
so has part: feature:1000977-1001079:-1:exon
so has part: feature:994880-995009:-1:exon
so has part: feature:992304-992397:-1:exon
so has part: feature:991483-991645:-1:exon

XP_048414767.1
type: Protein
SIO_000068: ncbiprotein

position:991483:-1
position: 991483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1004323:-1
position: 1004323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1004185-1004323:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1003954-1004109:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1002657-1002753:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1000977-1001079:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:994880-995009:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:992304-992397:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:991483-991645:-1:exon

ppil3
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: ppil3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1041408..1047802)
location: region:1041408-1047802:-1
so has part: feature:1041408-1047802:-1:exon
subclass of: SO_0000010

125465385
type: Gene
SIO_000068: ncbigene

position:1041408:-1
position: 1041408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1047802:-1
position: 1047802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1041408-1047802:-1:exon

ppil3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: ppil3
product: peptidylprolyl isomerase (cyclophilin)-like 3, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558812.1
SIO_010081: ppil3
subclass of: SO_0000673
so part of: ppil3
location: complement(join(1041408..1042642,1045157..1045275,1045529..1045596,1046298..1046391,1047577..1047651,1047742..1047802))
location: region:1041408-1047802:-1
so has part: feature:1047742-1047802:-1:exon
so has part: feature:1047577-1047651:-1:exon
so has part: feature:1046298-1046391:-1:exon
so has part: feature:1045529-1045596:-1:exon
so has part: feature:1045157-1045275:-1:exon
so has part: feature:1041408-1042642:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1047742-1047802:-1:exon

position:1047742:-1
position: 1047742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1047577-1047651:-1:exon

position:1047577:-1
position: 1047577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1047651:-1
position: 1047651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1046298-1046391:-1:exon

position:1046298:-1
position: 1046298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1046391:-1
position: 1046391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1045529-1045596:-1:exon

position:1045529:-1
position: 1045529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1045596:-1
position: 1045596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1045157-1045275:-1:exon

position:1045157:-1
position: 1045157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1045275:-1
position: 1045275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1041408-1042642:-1:exon

position:1042642:-1
position: 1042642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ppil3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: ppil3
product: peptidylprolyl isomerase (cyclophilin)-like 3, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558811.1
SIO_010081: ppil3
subclass of: SO_0000673
so part of: ppil3
location: complement(join(1041408..1042642,1045157..1045275,1045529..1045596,1046298..1046391,1047577..1047735))
location: region:1041408-1047735:-1
so has part: feature:1047577-1047735:-1:exon
so has part: feature:1046298-1046391:-1:exon
so has part: feature:1045529-1045596:-1:exon
so has part: feature:1045157-1045275:-1:exon
so has part: feature:1041408-1042642:-1:exon

position:1047735:-1
position: 1047735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1047577-1047735:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1046298-1046391:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1045529-1045596:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1045157-1045275:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1041408-1042642:-1:exon

ppil3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: ppil3
product: peptidylprolyl isomerase (cyclophilin)-like 3, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558813.1
SIO_010081: ppil3
subclass of: SO_0000673
so part of: ppil3
location: complement(join(1041408..1042642,1045157..1045275,1045529..1045596,1046298..1046391,1046987..1047146))
location: region:1041408-1047146:-1
so has part: feature:1046987-1047146:-1:exon
so has part: feature:1046298-1046391:-1:exon
so has part: feature:1045529-1045596:-1:exon
so has part: feature:1045157-1045275:-1:exon
so has part: feature:1041408-1042642:-1:exon

position:1047146:-1
position: 1047146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1046987-1047146:-1:exon

position:1046987:-1
position: 1046987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1046298-1046391:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1045529-1045596:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1045157-1045275:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1041408-1042642:-1:exon

ppil3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: ppil3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-prolyl cis-trans isomerase-like 3 isoform X2
translation: MALTIRTELGDMKLELFCEKAARSCENFLALCASDYYNGCLFHRNIKGFIVQTGDPTGTGKGGSSIWGGKFEDEFNEHLKHNVRGVVSMANNGPSTNGSQFFITYGKQPQLDMKYTVFGKVIDGLDTLDELEKLPVNEKTFRPLTDVRIKDVVIHANPFAL
SIO_010081: ppil3
subclass of: SO_0000673
so part of: ppil3
location: complement(join(1042516..1042642,1045157..1045275,1045529..1045596,1046298..1046391,1047577..1047651,1047742..1047744))
location: region:1042516-1047744:-1
so has part: feature:1047742-1047744:-1:exon
so has part: feature:1047577-1047651:-1:exon
so has part: feature:1046298-1046391:-1:exon
so has part: feature:1045529-1045596:-1:exon
so has part: feature:1045157-1045275:-1:exon
so has part: feature:1042516-1042642:-1:exon

XP_048414769.1
type: Protein
SIO_000068: ncbiprotein

position:1042516:-1
position: 1042516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1047744:-1
position: 1047744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1047742-1047744:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1047577-1047651:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1046298-1046391:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1045529-1045596:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1045157-1045275:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1042516-1042642:-1:exon

ppil3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: ppil3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-prolyl cis-trans isomerase-like 3 isoform X1
translation: MGGGGFEETARCCGHSLSLAPQALTIRTELGDMKLELFCEKAARSCENFLALCASDYYNGCLFHRNIKGFIVQTGDPTGTGKGGSSIWGGKFEDEFNEHLKHNVRGVVSMANNGPSTNGSQFFITYGKQPQLDMKYTVFGKVIDGLDTLDELEKLPVNEKTFRPLTDVRIKDVVIHANPFAL
SIO_010081: ppil3
subclass of: SO_0000673
so part of: ppil3
location: complement(join(1042516..1042642,1045157..1045275,1045529..1045596,1046298..1046391,1047577..1047717))
location: region:1042516-1047717:-1
so has part: feature:1047577-1047717:-1:exon
so has part: feature:1046298-1046391:-1:exon
so has part: feature:1045529-1045596:-1:exon
so has part: feature:1045157-1045275:-1:exon
so has part: feature:1042516-1042642:-1:exon

XP_048414768.1
type: Protein
SIO_000068: ncbiprotein

position:1047717:-1
position: 1047717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1047577-1047717:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1046298-1046391:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1045529-1045596:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1045157-1045275:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1042516-1042642:-1:exon

ppil3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: ppil3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-prolyl cis-trans isomerase-like 3 isoform X3
translation: MDQNFLALCASDYYNGCLFHRNIKGFIVQTGDPTGTGKGGSSIWGGKFEDEFNEHLKHNVRGVVSMANNGPSTNGSQFFITYGKQPQLDMKYTVFGKVIDGLDTLDELEKLPVNEKTFRPLTDVRIKDVVIHANPFAL
SIO_010081: ppil3
subclass of: SO_0000673
so part of: ppil3
location: complement(join(1042516..1042642,1045157..1045275,1045529..1045596,1046298..1046391,1046987..1046995))
location: region:1042516-1046995:-1
so has part: feature:1046987-1046995:-1:exon
so has part: feature:1046298-1046391:-1:exon
so has part: feature:1045529-1045596:-1:exon
so has part: feature:1045157-1045275:-1:exon
so has part: feature:1042516-1042642:-1:exon

XP_048414770.1
type: Protein
SIO_000068: ncbiprotein

position:1046995:-1
position: 1046995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1046987-1046995:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1046298-1046391:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1045529-1045596:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1045157-1045275:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1042516-1042642:-1:exon

LOC125465388
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125465388
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1047819..1086202
location: region:1047819-1086202:1
so has part: feature:1047819-1086202:1:exon
subclass of: SO_0000011

125465388
type: Gene
SIO_000068: ncbigene

position:1047819:1
position: 1047819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1086202:1
position: 1086202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1047819-1086202:1:exon

LOC125465388
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 378071
nc RNA class: lncRNA
gene: LOC125465388
product: uncharacterized LOC125465388
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_007250230.1
SIO_010081: LOC125465388
subclass of: SO_0000673
so part of: LOC125465388
location: join(1047819..1047918,1077024..1077090,1082088..1082199,1085711..1086202)
location: region:1047819-1086202:1
so has part: feature:1047819-1047918:1:exon
so has part: feature:1077024-1077090:1:exon
so has part: feature:1082088-1082199:1:exon
so has part: feature:1085711-1086202:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1047819-1047918:1:exon

position:1047918:1
position: 1047918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1077024-1077090:1:exon

position:1077024:1
position: 1077024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1077090:1
position: 1077090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1082088-1082199:1:exon

position:1082088:1
position: 1082088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1082199:1
position: 1082199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1085711-1086202:1:exon

position:1085711:1
position: 1085711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125465378
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125465378
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1070905..1118242)
location: region:1070905-1118242:-1
so has part: feature:1070905-1118242:-1:exon
subclass of: SO_0000010

125465378
type: Gene
SIO_000068: ncbigene

position:1070905:-1
position: 1070905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1118242:-1
position: 1118242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1070905-1118242:-1:exon

LOC125465378
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465378
product: ectonucleoside triphosphate diphosphohydrolase 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_048558805.1
SIO_010081: LOC125465378
subclass of: SO_0000673
so part of: LOC125465378
location: complement(join(1070905..1073089,1073588..1073725,1073989..1074108,1085950..1086219,1086505..1086732,1095334..1095493,1099230..1099380,1101083..1101200,1118044..1118242))
location: region:1070905-1118242:-1
so has part: feature:1118044-1118242:-1:exon
so has part: feature:1101083-1101200:-1:exon
so has part: feature:1099230-1099380:-1:exon
so has part: feature:1095334-1095493:-1:exon
so has part: feature:1086505-1086732:-1:exon
so has part: feature:1085950-1086219:-1:exon
so has part: feature:1073989-1074108:-1:exon
so has part: feature:1073588-1073725:-1:exon
so has part: feature:1070905-1073089:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1118044-1118242:-1:exon

position:1118044:-1
position: 1118044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1101083-1101200:-1:exon

position:1101083:-1
position: 1101083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1101200:-1
position: 1101200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1099230-1099380:-1:exon

position:1099230:-1
position: 1099230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1099380:-1
position: 1099380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1095334-1095493:-1:exon

position:1095334:-1
position: 1095334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1095493:-1
position: 1095493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1086505-1086732:-1:exon

position:1086505:-1
position: 1086505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1086732:-1
position: 1086732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1085950-1086219:-1:exon

position:1085950:-1
position: 1085950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1086219:-1
position: 1086219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1073989-1074108:-1:exon

position:1073989:-1
position: 1073989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1074108:-1
position: 1074108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1073588-1073725:-1:exon

position:1073588:-1
position: 1073588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1073725:-1
position: 1073725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1070905-1073089:-1:exon

position:1073089:-1
position: 1073089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125465378
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465378
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ectonucleoside triphosphate diphosphohydrolase 2-like
translation: MPGLYHLIISAALGVLGVLGIILLCSTTRDVEQPFSHKYGIVIDAGSSRTTLYVYKWPSGKENSTGIVSEHSKCNVKGPGISSYAYNPSQAGNSLKPCLDETVKNIPSQLHAQTPLYLGATAGMRLLSLADPKASKGVLASIANSLKSYKFKYQGAKILTGNEEGVFGWVTANYLLENFVKYSWIGKWIKPLKKTVGAMDFGGASTQISFVPSDEIEDSENEAVLRLYGYDYKVYTHSYLCYGRDQVLKKVFSKMMIAQGYNSNITNPCMPRGYTVSHPLNFIYNSSCTASEKPQDYSPEKTITFSGSSQTDQCYEFVDSIFNFSSCNHSRCAFNNVYQPEVTGDFLAFAAFYYTMNFLKVTLDRSITSPQELRAAADTICGMDFKQLKAKAQNVSESRLVDYCTTSHYIQILTTKGYKFDDVTFKNIAFQKKAGDTTIGWALGYMLNLTNMIPPEEVGTWKVQMVGAWAVLIVICILVIVAGILIFILSSRSVKNDSVL
SIO_010081: LOC125465378
subclass of: SO_0000673
so part of: LOC125465378
location: complement(join(1072886..1073089,1073588..1073725,1073989..1074108,1085950..1086219,1086505..1086732,1095334..1095493,1099230..1099380,1101083..1101200,1118044..1118157))
location: region:1072886-1118157:-1
so has part: feature:1118044-1118157:-1:exon
so has part: feature:1101083-1101200:-1:exon
so has part: feature:1099230-1099380:-1:exon
so has part: feature:1095334-1095493:-1:exon
so has part: feature:1086505-1086732:-1:exon
so has part: feature:1085950-1086219:-1:exon
so has part: feature:1073989-1074108:-1:exon
so has part: feature:1073588-1073725:-1:exon
so has part: feature:1072886-1073089:-1:exon

XP_048414762.1
type: Protein
SIO_000068: ncbiprotein

position:1072886:-1
position: 1072886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1118157:-1
position: 1118157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1118044-1118157:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1101083-1101200:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1099230-1099380:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1095334-1095493:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1086505-1086732:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1085950-1086219:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1073989-1074108:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1073588-1073725:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1072886-1073089:-1:exon

LOC125465390
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125465390
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1149603..1185095)
location: region:1149603-1185095:-1
so has part: feature:1149603-1185095:-1:exon
subclass of: SO_0000011

125465390
type: Gene
SIO_000068: ncbigene

position:1149603:-1
position: 1149603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1185095:-1
position: 1185095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1149603-1185095:-1:exon

LOC125465390
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 378071
nc RNA class: lncRNA
gene: LOC125465390
product: uncharacterized LOC125465390
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_007250232.1
SIO_010081: LOC125465390
subclass of: SO_0000673
so part of: LOC125465390
location: complement(join(1149603..1150642,1158437..1158644,1162834..1162914,1184920..1185095))
location: region:1149603-1185095:-1
so has part: feature:1184920-1185095:-1:exon
so has part: feature:1162834-1162914:-1:exon
so has part: feature:1158437-1158644:-1:exon
so has part: feature:1149603-1150642:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1184920-1185095:-1:exon

position:1184920:-1
position: 1184920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1162834-1162914:-1:exon

position:1162834:-1
position: 1162834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1162914:-1
position: 1162914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1158437-1158644:-1:exon

position:1158437:-1
position: 1158437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1158644:-1
position: 1158644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1149603-1150642:-1:exon

position:1150642:-1
position: 1150642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125465389
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125465389
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1158659..1171526
location: region:1158659-1171526:1
so has part: feature:1158659-1171526:1:exon
subclass of: SO_0000011

125465389
type: Gene
SIO_000068: ncbigene

position:1158659:1
position: 1158659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1171526:1
position: 1171526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1158659-1171526:1:exon

LOC125465389
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 378071
nc RNA class: lncRNA
gene: LOC125465389
product: uncharacterized LOC125465389
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_007250231.1
SIO_010081: LOC125465389
subclass of: SO_0000673
so part of: LOC125465389
location: join(1158659..1159327,1165740..1165800,1171234..1171526)
location: region:1158659-1171526:1
so has part: feature:1158659-1159327:1:exon
so has part: feature:1165740-1165800:1:exon
so has part: feature:1171234-1171526:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1158659-1159327:1:exon

position:1159327:1
position: 1159327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1165740-1165800:1:exon

position:1165740:1
position: 1165740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1165800:1
position: 1165800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1171234-1171526:1:exon

position:1171234:1
position: 1171234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

sapcd2
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: sapcd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1216327..1245225)
location: region:1216327-1245225:-1
so has part: feature:1216327-1245225:-1:exon
subclass of: SO_0000010

125465382
type: Gene
SIO_000068: ncbigene

position:1216327:-1
position: 1216327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1245225:-1
position: 1245225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1216327-1245225:-1:exon

sapcd2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: sapcd2
product: suppressor APC domain containing 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_048558808.1
SIO_010081: sapcd2
subclass of: SO_0000673
so part of: sapcd2
location: complement(join(1216327..1217057,1219957..1220082,1224942..1225043,1232257..1232403,1236319..1236446,1241873..1242214,1244686..1245225))
location: region:1216327-1245225:-1
so has part: feature:1244686-1245225:-1:exon
so has part: feature:1241873-1242214:-1:exon
so has part: feature:1236319-1236446:-1:exon
so has part: feature:1232257-1232403:-1:exon
so has part: feature:1224942-1225043:-1:exon
so has part: feature:1219957-1220082:-1:exon
so has part: feature:1216327-1217057:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1244686-1245225:-1:exon

position:1244686:-1
position: 1244686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1241873-1242214:-1:exon

position:1241873:-1
position: 1241873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1242214:-1
position: 1242214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1236319-1236446:-1:exon

position:1236319:-1
position: 1236319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1236446:-1
position: 1236446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1232257-1232403:-1:exon

position:1232257:-1
position: 1232257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1232403:-1
position: 1232403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1224942-1225043:-1:exon

position:1224942:-1
position: 1224942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1225043:-1
position: 1225043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1219957-1220082:-1:exon

position:1219957:-1
position: 1219957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1220082:-1
position: 1220082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1216327-1217057:-1:exon

position:1217057:-1
position: 1217057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

sapcd2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: sapcd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppressor APC domain-containing protein 2
translation: MQSTVSGSVELETGPSFQELPRGFLHSLRTLFDILDDGRRGSVHILEIESRWSQGSPGRALPPGVLQCLRRVAPASGYLTFERFVQGLQSSLLSPGNRQAQESSNSVWKRTKDGSRRSNENLASLRTLKVPRQICPATEHHHLMSDKYRAPGVRPKSPLRARPANIPNNWTEPDHVSLEPGQCKTTLAEREPTMEQRGTNTGPQSAIECLGLEEQKHLEAEGRHMARCQSEASCGRMASGLKRRQELGELRRHTITSGIDYDRLKWMKELEQEKDALLQGLEVIDCARGWYIQQFQAIQERQKNLSKSPSGNANAAEGHSVRMDLLLSKLQAVRHCLVDLTSCSAKLMSRSCNMVNGCEFPAPCNIPVPGSNLQMVTMLKEQNRLLTQEVSEKSDRITQLEQEKVALIKQLFTARSHSHHDNSQLDSTFI
SIO_010081: sapcd2
subclass of: SO_0000673
so part of: sapcd2
location: complement(join(1216929..1217057,1219957..1220082,1224942..1225043,1232257..1232403,1236319..1236446,1241873..1242214,1244686..1245004))
location: region:1216929-1245004:-1
so has part: feature:1244686-1245004:-1:exon
so has part: feature:1241873-1242214:-1:exon
so has part: feature:1236319-1236446:-1:exon
so has part: feature:1232257-1232403:-1:exon
so has part: feature:1224942-1225043:-1:exon
so has part: feature:1219957-1220082:-1:exon
so has part: feature:1216929-1217057:-1:exon

XP_048414765.1
type: Protein
SIO_000068: ncbiprotein

position:1216929:-1
position: 1216929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1245004:-1
position: 1245004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1244686-1245004:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1241873-1242214:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1236319-1236446:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1232257-1232403:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1224942-1225043:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1219957-1220082:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1216929-1217057:-1:exon

LOC125465381
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125465381
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1261928..1279096
location: region:1261928-1279096:1
so has part: feature:1261928-1279096:1:exon
subclass of: SO_0000010

125465381
type: Gene
SIO_000068: ncbigene

position:1261928:1
position: 1261928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1279096:1
position: 1279096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1261928-1279096:1:exon

LOC125465381
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465381
product: UDP-N-acetylhexosamine pyrophosphorylase-like protein 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558807.1
SIO_010081: LOC125465381
subclass of: SO_0000673
so part of: LOC125465381
location: join(1261928..1262021,1263884..1264088,1264394..1264569,1268180..1268352,1268937..1269130,1271133..1271273,1274741..1274929,1276790..1276856,1277798..1279096)
location: region:1261928-1279096:1
so has part: feature:1261928-1262021:1:exon
so has part: feature:1263884-1264088:1:exon
so has part: feature:1264394-1264569:1:exon
so has part: feature:1268180-1268352:1:exon
so has part: feature:1268937-1269130:1:exon
so has part: feature:1271133-1271273:1:exon
so has part: feature:1274741-1274929:1:exon
so has part: feature:1276790-1276856:1:exon
so has part: feature:1277798-1279096:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1261928-1262021:1:exon

position:1262021:1
position: 1262021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1263884-1264088:1:exon

position:1263884:1
position: 1263884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1264088:1
position: 1264088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1264394-1264569:1:exon

position:1264394:1
position: 1264394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1264569:1
position: 1264569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1268180-1268352:1:exon

position:1268180:1
position: 1268180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1268352:1
position: 1268352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1268937-1269130:1:exon

position:1268937:1
position: 1268937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1269130:1
position: 1269130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1271133-1271273:1:exon

position:1271133:1
position: 1271133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1271273:1
position: 1271273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1274741-1274929:1:exon

position:1274741:1
position: 1274741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1274929:1
position: 1274929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1276790-1276856:1:exon

position:1276790:1
position: 1276790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1276856:1
position: 1276856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1277798-1279096:1:exon

position:1277798:1
position: 1277798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125465381
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465381
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-N-acetylhexosamine pyrophosphorylase-like protein 1
translation: MMFPCVCCPCSSRWFWPCFWKLLLEEHGFHEISESRVAVLLLAGGQGTRLGVPYPKGMYDVGLPSGKTLYQIQAERIRKVQQLAEERLGKKCVVHWYIMTSEFTLEPTQKFFAQHNYFGLVKSNVVMFEQQMLPAVDFNGRIILEQKGKIAMAPDGNGGLYRALTNNRILEDMDRRGICFVHVYCVDNILVKMADPVFIGFCVEKGADCGAKVVEKAYPTEPVGVVCLVDGIYQVVEYSEVSQETVEQRNPDGRLTFNAGNICNHFFTVDFLKSVTEEFEPQLKRHIAVKKIPYVDEQGNAVRPEVPNGIKMEKFVFDVFQFSKKFVVFEVLREDEFSPLKNADSAGSKDTPSTARRALLWQHYRWALQAGAHFLDSNNMRIPHLTRHQEAEEPPAVCEISALVSCEGEGLEEYLKDREFRSPLLLTEEALTALGQCQ
SIO_010081: LOC125465381
subclass of: SO_0000673
so part of: LOC125465381
location: join(1261940..1262021,1263884..1264088,1264394..1264569,1268180..1268352,1268937..1269130,1271133..1271273,1274741..1274929,1276790..1276856,1277798..1277887)
location: region:1261940-1277887:1
so has part: feature:1261940-1262021:1:exon
so has part: feature:1263884-1264088:1:exon
so has part: feature:1264394-1264569:1:exon
so has part: feature:1268180-1268352:1:exon
so has part: feature:1268937-1269130:1:exon
so has part: feature:1271133-1271273:1:exon
so has part: feature:1274741-1274929:1:exon
so has part: feature:1276790-1276856:1:exon
so has part: feature:1277798-1277887:1:exon

XP_048414764.1
type: Protein
SIO_000068: ncbiprotein

position:1261940:1
position: 1261940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1277887:1
position: 1277887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1261940-1262021:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1263884-1264088:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1264394-1264569:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1268180-1268352:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1268937-1269130:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1271133-1271273:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1274741-1274929:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1276790-1276856:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1277798-1277887:1:exon

edf1
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: edf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1289743..1299614
location: region:1289743-1299614:1
so has part: feature:1289743-1299614:1:exon
subclass of: SO_0000010

125465386
type: Gene
SIO_000068: ncbigene

position:1289743:1
position: 1289743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1299614:1
position: 1299614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1289743-1299614:1:exon

edf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: edf1
product: endothelial differentiation-related factor 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558815.1
SIO_010081: edf1
subclass of: SO_0000673
so part of: edf1
location: join(1289743..1289870,1292722..1292773,1295830..1295990,1296291..1296384,1299175..1299614)
location: region:1289743-1299614:1
so has part: feature:1289743-1289870:1:exon
so has part: feature:1292722-1292773:1:exon
so has part: feature:1295830-1295990:1:exon
so has part: feature:1296291-1296384:1:exon
so has part: feature:1299175-1299614:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1289743-1289870:1:exon

position:1289870:1
position: 1289870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1292722-1292773:1:exon

position:1292722:1
position: 1292722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1292773:1
position: 1292773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1295830-1295990:1:exon

position:1295830:1
position: 1295830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1295990:1
position: 1295990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1296291-1296384:1:exon

position:1296291:1
position: 1296291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1296384:1
position: 1296384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1299175-1299614:1:exon

position:1299175:1
position: 1299175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

edf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: edf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endothelial differentiation-related factor 1 homolog
translation: MAESDWDTVTVLRKKGPSAAQAKSKQAVTLAQRRGEDVETTKKWAAGQNKQHTITKNTAKLDRETEELHHERVSLTVGKLIQQGRQNLGMNQKELATRISEKPQVIADYECGKAIPNNQVLGKIERVLGLKLRGKDIGQPLEKGPKKK
SIO_010081: edf1
subclass of: SO_0000673
so part of: edf1
location: join(1289793..1289870,1292722..1292773,1295830..1295990,1296291..1296384,1299175..1299236)
location: region:1289793-1299236:1
so has part: feature:1289793-1289870:1:exon
so has part: feature:1292722-1292773:1:exon
so has part: feature:1295830-1295990:1:exon
so has part: feature:1296291-1296384:1:exon
so has part: feature:1299175-1299236:1:exon

XP_048414772.1
type: Protein
SIO_000068: ncbiprotein

position:1289793:1
position: 1289793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1299236:1
position: 1299236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1289793-1289870:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1292722-1292773:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1295830-1295990:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1296291-1296384:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1299175-1299236:1:exon

LOC125465552
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125465552
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1377149..1413943)
location: region:1377149-1413943:-1
so has part: feature:1377149-1413943:-1:exon
subclass of: SO_0000010

125465552
type: Gene
SIO_000068: ncbigene

position:1377149:-1
position: 1377149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1413943:-1
position: 1413943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1377149-1413943:-1:exon

LOC125465552
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465552
product: protein AMBP-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048559193.1
SIO_010081: LOC125465552
subclass of: SO_0000673
so part of: LOC125465552
location: complement(join(1377149..1377221,1377840..1377876,1394424..1394525,1394608..1394721,1402487..1402566,1403898..1404040,1413734..1413943))
location: region:1377149-1413943:-1
so has part: feature:1413734-1413943:-1:exon
so has part: feature:1403898-1404040:-1:exon
so has part: feature:1402487-1402566:-1:exon
so has part: feature:1394608-1394721:-1:exon
so has part: feature:1394424-1394525:-1:exon
so has part: feature:1377840-1377876:-1:exon
so has part: feature:1377149-1377221:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1413734-1413943:-1:exon

position:1413734:-1
position: 1413734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1403898-1404040:-1:exon

position:1403898:-1
position: 1403898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1404040:-1
position: 1404040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1402487-1402566:-1:exon

position:1402487:-1
position: 1402487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1402566:-1
position: 1402566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1394608-1394721:-1:exon

position:1394608:-1
position: 1394608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1394721:-1
position: 1394721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1394424-1394525:-1:exon

position:1394424:-1
position: 1394424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1394525:-1
position: 1394525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1377840-1377876:-1:exon

position:1377840:-1
position: 1377840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1377876:-1
position: 1377876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1377149-1377221:-1:exon

position:1377221:-1
position: 1377221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125465552
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465552
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein AMBP-like
translation: MRSRVVLLFAVLFLGTGAAVPLRETNHSRVQENFDFNQTLGQWFSIGSAGDSLWFETLMGTSRMIKFILSATEETNKFKAILVHEWNGTCINMTVYYEYLESQQMFKYIPVPGYDAHIAIQVGLIQYQEFAFLIYDSQIQGRKTKSVALYGRTRKLRTEINEQFKEFVLRQGIPEEMIMFLPDKGSCSGNDDIWSTGRR
SIO_010081: LOC125465552
subclass of: SO_0000673
so part of: LOC125465552
location: complement(join(1377212..1377221,1377840..1377876,1394424..1394525,1394608..1394721,1402487..1402566,1403898..1404040,1413734..1413847))
location: region:1377212-1413847:-1
so has part: feature:1413734-1413847:-1:exon
so has part: feature:1403898-1404040:-1:exon
so has part: feature:1402487-1402566:-1:exon
so has part: feature:1394608-1394721:-1:exon
so has part: feature:1394424-1394525:-1:exon
so has part: feature:1377840-1377876:-1:exon
so has part: feature:1377212-1377221:-1:exon

XP_048415150.1
type: Protein
SIO_000068: ncbiprotein

position:1377212:-1
position: 1377212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1413847:-1
position: 1413847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1413734-1413847:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1403898-1404040:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1402487-1402566:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1394608-1394721:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1394424-1394525:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1377840-1377876:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1377212-1377221:-1:exon

LOC125465568
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125465568
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1421615..1462649)
location: region:1421615-1462649:-1
so has part: feature:1421615-1462649:-1:exon
subclass of: SO_0000010

125465568
type: Gene
SIO_000068: ncbigene

position:1421615:-1
position: 1421615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1462649:-1
position: 1462649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1421615-1462649:-1:exon

LOC125465568
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465568
product: protein AMBP-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048559246.1
SIO_010081: LOC125465568
subclass of: SO_0000673
so part of: LOC125465568
location: complement(join(1421615..1421846,1424763..1424954,1425208..1425283,1438189..1438232,1439124..1439225,1439308..1439421,1452675..1452754,1462508..1462649))
location: region:1421615-1462649:-1
so has part: feature:1462508-1462649:-1:exon
so has part: feature:1452675-1452754:-1:exon
so has part: feature:1439308-1439421:-1:exon
so has part: feature:1439124-1439225:-1:exon
so has part: feature:1438189-1438232:-1:exon
so has part: feature:1425208-1425283:-1:exon
so has part: feature:1424763-1424954:-1:exon
so has part: feature:1421615-1421846:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1462508-1462649:-1:exon

position:1462508:-1
position: 1462508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1452675-1452754:-1:exon

position:1452675:-1
position: 1452675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1452754:-1
position: 1452754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1439308-1439421:-1:exon

position:1439308:-1
position: 1439308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1439421:-1
position: 1439421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1439124-1439225:-1:exon

position:1439124:-1
position: 1439124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1439225:-1
position: 1439225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1438189-1438232:-1:exon

position:1438189:-1
position: 1438189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1438232:-1
position: 1438232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1425208-1425283:-1:exon

position:1425208:-1
position: 1425208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1425283:-1
position: 1425283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1424763-1424954:-1:exon

position:1424763:-1
position: 1424763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1424954:-1
position: 1424954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1421615-1421846:-1:exon

position:1421846:-1
position: 1421846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125465568
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465568
product: protein AMBP-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048559245.1
SIO_010081: LOC125465568
subclass of: SO_0000673
so part of: LOC125465568
location: complement(join(1421615..1421846,1424763..1424954,1425208..1425283,1438189..1438232,1439124..1439225,1439308..1439421,1452675..1452754,1456498..1456640,1462508..1462649))
location: region:1421615-1462649:-1
so has part: feature:1462508-1462649:-1:exon
so has part: feature:1456498-1456640:-1:exon
so has part: feature:1452675-1452754:-1:exon
so has part: feature:1439308-1439421:-1:exon
so has part: feature:1439124-1439225:-1:exon
so has part: feature:1438189-1438232:-1:exon
so has part: feature:1425208-1425283:-1:exon
so has part: feature:1424763-1424954:-1:exon
so has part: feature:1421615-1421846:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1462508-1462649:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1456498-1456640:-1:exon

position:1456498:-1
position: 1456498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1456640:-1
position: 1456640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1452675-1452754:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1439308-1439421:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1439124-1439225:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1438189-1438232:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1425208-1425283:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1424763-1424954:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1421615-1421846:-1:exon

LOC125465568
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465568
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein AMBP-like isoform X1
translation: MRCSVVLLFAVLSLRTGAAVPLSETDHDQIQENFDFNQFLGTWFALATGCNCSWFNKYKDTMTITKVTLSTSEESNKLIGNFEFDRNGTCDHLVGDYEIQDIPGHFVFNSTSAYASRTDIQVIKMNYQEYAFLLLNTMKAATSSESVALYGRTRKLRKEIKDEFKDFALRHGIPGEMVLFLPEKGACLPWDPIPESPVKKHRKWQTFREQRSVLTDFVSKIDTAESCQMEPDSGPCFGRFRRFYYNQNLMACQIFVYGGCAGNRNNFETEQSCLQSCRTVDE
SIO_010081: LOC125465568
subclass of: SO_0000673
so part of: LOC125465568
location: complement(join(1424779..1424954,1425208..1425283,1438189..1438232,1439124..1439225,1439308..1439421,1452675..1452754,1456498..1456640,1462508..1462621))
location: region:1424779-1462621:-1
so has part: feature:1462508-1462621:-1:exon
so has part: feature:1456498-1456640:-1:exon
so has part: feature:1452675-1452754:-1:exon
so has part: feature:1439308-1439421:-1:exon
so has part: feature:1439124-1439225:-1:exon
so has part: feature:1438189-1438232:-1:exon
so has part: feature:1425208-1425283:-1:exon
so has part: feature:1424779-1424954:-1:exon

XP_048415202.1
type: Protein
SIO_000068: ncbiprotein

position:1424779:-1
position: 1424779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1462621:-1
position: 1462621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1462508-1462621:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1456498-1456640:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1452675-1452754:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1439308-1439421:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1439124-1439225:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1438189-1438232:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1425208-1425283:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1424779-1424954:-1:exon

LOC125465568
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465568
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein AMBP-like isoform X2
translation: MIRFRKTLISIRNGTCDHLVGDYEIQDIPGHFVFNSTSAYASRTDIQVIKMNYQEYAFLLLNTMKAATSSESVALYGRTRKLRKEIKDEFKDFALRHGIPGEMVLFLPEKGACLPWDPIPESPVKKHRKWQTFREQRSVLTDFVSKIDTAESCQMEPDSGPCFGRFRRFYYNQNLMACQIFVYGGCAGNRNNFETEQSCLQSCRTVDE
SIO_010081: LOC125465568
subclass of: SO_0000673
so part of: LOC125465568
location: complement(join(1424779..1424954,1425208..1425283,1438189..1438232,1439124..1439225,1439308..1439421,1452675..1452754,1462508..1462542))
location: region:1424779-1462542:-1
so has part: feature:1462508-1462542:-1:exon
so has part: feature:1452675-1452754:-1:exon
so has part: feature:1439308-1439421:-1:exon
so has part: feature:1439124-1439225:-1:exon
so has part: feature:1438189-1438232:-1:exon
so has part: feature:1425208-1425283:-1:exon
so has part: feature:1424779-1424954:-1:exon

XP_048415203.1
type: Protein
SIO_000068: ncbiprotein

position:1462542:-1
position: 1462542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1462508-1462542:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1452675-1452754:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1439308-1439421:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1439124-1439225:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1438189-1438232:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1425208-1425283:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1424779-1424954:-1:exon

LOC125465567
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125465567
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1469017..1497999
location: region:1469017-1497999:1
so has part: feature:1469017-1497999:1:exon
subclass of: SO_0000010

125465567
type: Gene
SIO_000068: ncbigene

position:1469017:1
position: 1469017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1497999:1
position: 1497999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1469017-1497999:1:exon

LOC125465567
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465567
product: protein AMBP-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048559244.1
SIO_010081: LOC125465567
subclass of: SO_0000673
so part of: LOC125465567
location: join(1469017..1469188,1473530..1473675,1479661..1479743,1484003..1484116,1484199..1484300,1490242..1490285,1491712..1491793,1492146..1492313,1497140..1497313,1497768..1497999)
location: region:1469017-1497999:1
so has part: feature:1469017-1469188:1:exon
so has part: feature:1473530-1473675:1:exon
so has part: feature:1479661-1479743:1:exon
so has part: feature:1484003-1484116:1:exon
so has part: feature:1484199-1484300:1:exon
so has part: feature:1490242-1490285:1:exon
so has part: feature:1491712-1491793:1:exon
so has part: feature:1492146-1492313:1:exon
so has part: feature:1497140-1497313:1:exon
so has part: feature:1497768-1497999:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1469017-1469188:1:exon

position:1469188:1
position: 1469188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1473530-1473675:1:exon

position:1473530:1
position: 1473530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1473675:1
position: 1473675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1479661-1479743:1:exon

position:1479661:1
position: 1479661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1479743:1
position: 1479743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1484003-1484116:1:exon

position:1484003:1
position: 1484003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1484116:1
position: 1484116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1484199-1484300:1:exon

position:1484199:1
position: 1484199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1484300:1
position: 1484300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1490242-1490285:1:exon

position:1490242:1
position: 1490242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1490285:1
position: 1490285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1491712-1491793:1:exon

position:1491712:1
position: 1491712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1491793:1
position: 1491793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1492146-1492313:1:exon

position:1492146:1
position: 1492146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1492313:1
position: 1492313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1497140-1497313:1:exon

position:1497140:1
position: 1497140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1497313:1
position: 1497313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1497768-1497999:1:exon

position:1497768:1
position: 1497768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125465567
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465567
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein AMBP-like
translation: MKRSVVLLFAVLSLRTGAAAPLSETNYDQVQENFDLNQFLGTWFTLGNGCDCPAFIKKIEKIVAVSKVTFSTNEEMNKLIANFVYDRNGTSCVHVTAEYDMQDTPGYYVFNSTTVFDATADLRVIKTNYQEYALILYDRMKGLSQTKSVALYGRTRNLRKEVKEEFKELALRHGIPEEMIIFLREKGACLPWDPIPESPVKNHKRRALGGPDEEGSGLGDFSSTTHSVESCQLAPDSGPCFRLFMKFYYNRSSMACQMFTYGGCRGNGNNYETERECLQRCRTVAACRLPLEPGPCKLNVSVWAFDSAVGACVPFMFGGCEGNGNKFYTKKECEEYCDAVPEGADELLVIPKKV
SIO_010081: LOC125465567
subclass of: SO_0000673
so part of: LOC125465567
location: join(1469075..1469188,1473530..1473675,1479661..1479743,1484003..1484116,1484199..1484300,1490242..1490285,1491712..1491793,1492146..1492313,1497140..1497313,1497768..1497805)
location: region:1469075-1497805:1
so has part: feature:1469075-1469188:1:exon
so has part: feature:1473530-1473675:1:exon
so has part: feature:1479661-1479743:1:exon
so has part: feature:1484003-1484116:1:exon
so has part: feature:1484199-1484300:1:exon
so has part: feature:1490242-1490285:1:exon
so has part: feature:1491712-1491793:1:exon
so has part: feature:1492146-1492313:1:exon
so has part: feature:1497140-1497313:1:exon
so has part: feature:1497768-1497805:1:exon

XP_048415201.1
type: Protein
SIO_000068: ncbiprotein

position:1469075:1
position: 1469075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1497805:1
position: 1497805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1469075-1469188:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1473530-1473675:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1479661-1479743:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1484003-1484116:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1484199-1484300:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1490242-1490285:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1491712-1491793:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1492146-1492313:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1497140-1497313:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1497768-1497805:1:exon

LOC125465570
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125465570
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1509929..1521520
location: region:1509929-1521520:1
so has part: feature:1509929-1521520:1:exon
subclass of: SO_0000011

125465570
type: Gene
SIO_000068: ncbigene

position:1509929:1
position: 1509929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1521520:1
position: 1521520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1509929-1521520:1:exon

LOC125465570
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 378071
nc RNA class: lncRNA
gene: LOC125465570
product: uncharacterized LOC125465570
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_007250279.1
SIO_010081: LOC125465570
subclass of: SO_0000673
so part of: LOC125465570
location: join(1509929..1510014,1515316..1515466,1521322..1521520)
location: region:1509929-1521520:1
so has part: feature:1509929-1510014:1:exon
so has part: feature:1515316-1515466:1:exon
so has part: feature:1521322-1521520:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1509929-1510014:1:exon

position:1510014:1
position: 1510014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1515316-1515466:1:exon

position:1515316:1
position: 1515316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1515466:1
position: 1515466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1521322-1521520:1:exon

position:1521322:1
position: 1521322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125465569
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125465569
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1515457..1527741)
location: region:1515457-1527741:-1
so has part: feature:1515457-1527741:-1:exon
subclass of: SO_0000010

125465569
type: Gene
SIO_000068: ncbigene

position:1515457:-1
position: 1515457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1527741:-1
position: 1527741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1515457-1527741:-1:exon

LOC125465569
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465569
product: lipocalin-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048559247.1
SIO_010081: LOC125465569
subclass of: SO_0000673
so part of: LOC125465569
location: complement(join(1515457..1515597,1516241..1516266,1517220..1517321,1520772..1520885,1522461..1522537,1525709..1525848,1527554..1527741))
location: region:1515457-1527741:-1
so has part: feature:1527554-1527741:-1:exon
so has part: feature:1525709-1525848:-1:exon
so has part: feature:1522461-1522537:-1:exon
so has part: feature:1520772-1520885:-1:exon
so has part: feature:1517220-1517321:-1:exon
so has part: feature:1516241-1516266:-1:exon
so has part: feature:1515457-1515597:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1527554-1527741:-1:exon

position:1527554:-1
position: 1527554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1525709-1525848:-1:exon

position:1525709:-1
position: 1525709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1525848:-1
position: 1525848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1522461-1522537:-1:exon

position:1522461:-1
position: 1522461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1522537:-1
position: 1522537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1520772-1520885:-1:exon

position:1520772:-1
position: 1520772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1520885:-1
position: 1520885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1517220-1517321:-1:exon

position:1517220:-1
position: 1517220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1517321:-1
position: 1517321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1516241-1516266:-1:exon

position:1516241:-1
position: 1516241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1516266:-1
position: 1516266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1515457-1515597:-1:exon

position:1515597:-1
position: 1515597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125465569
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465569
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lipocalin-like
translation: MNKLVFCATLALFWSAVVSGEIQVQRNFNLDQFVGKWYIIGMASDAQWFTTRKDKFRMSTILMKPAENDKVETVLTKTRRGRCLQIIFPYRMTGREGQFFFHSDRWNSDNDVYVTETNYDEYALIHNTITKGPEVTTLVKLYGRDQELRPELLEKFRQYSLAHGLEEQNIVTFAKQDECKPVPVED
SIO_010081: LOC125465569
subclass of: SO_0000673
so part of: LOC125465569
location: complement(join(1515592..1515597,1516241..1516266,1517220..1517321,1520772..1520885,1522461..1522537,1525709..1525848,1527554..1527649))
location: region:1515592-1527649:-1
so has part: feature:1527554-1527649:-1:exon
so has part: feature:1525709-1525848:-1:exon
so has part: feature:1522461-1522537:-1:exon
so has part: feature:1520772-1520885:-1:exon
so has part: feature:1517220-1517321:-1:exon
so has part: feature:1516241-1516266:-1:exon
so has part: feature:1515592-1515597:-1:exon

XP_048415204.1
type: Protein
SIO_000068: ncbiprotein

position:1515592:-1
position: 1515592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1527649:-1
position: 1527649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1527554-1527649:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1525709-1525848:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1522461-1522537:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1520772-1520885:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1517220-1517321:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1516241-1516266:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1515592-1515597:-1:exon

c8g
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: c8g
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1541064..1571900)
location: region:1541064-1571900:-1
so has part: feature:1541064-1571900:-1:exon
subclass of: SO_0000010

125465251
type: Gene
SIO_000068: ncbigene

position:1541064:-1
position: 1541064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1571900:-1
position: 1571900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1541064-1571900:-1:exon

c8g
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: c8g
product: complement component 8, gamma polypeptide, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048558530.1
SIO_010081: c8g
subclass of: SO_0000673
so part of: c8g
location: complement(join(1541064..1541206,1545970..1546005,1547487..1547588,1548637..1548738,1548816..1548886,1555715..1555851,1569874..1569948,1571665..1571900))
location: region:1541064-1571900:-1
so has part: feature:1571665-1571900:-1:exon
so has part: feature:1569874-1569948:-1:exon
so has part: feature:1555715-1555851:-1:exon
so has part: feature:1548816-1548886:-1:exon
so has part: feature:1548637-1548738:-1:exon
so has part: feature:1547487-1547588:-1:exon
so has part: feature:1545970-1546005:-1:exon
so has part: feature:1541064-1541206:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1571665-1571900:-1:exon

position:1571665:-1
position: 1571665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1569874-1569948:-1:exon

position:1569874:-1
position: 1569874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1569948:-1
position: 1569948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1555715-1555851:-1:exon

position:1555715:-1
position: 1555715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1555851:-1
position: 1555851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1548816-1548886:-1:exon

position:1548816:-1
position: 1548816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1548886:-1
position: 1548886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1548637-1548738:-1:exon

position:1548637:-1
position: 1548637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1548738:-1
position: 1548738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1547487-1547588:-1:exon

position:1547487:-1
position: 1547487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1547588:-1
position: 1547588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1545970-1546005:-1:exon

position:1545970:-1
position: 1545970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1546005:-1
position: 1546005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1541064-1541206:-1:exon

position:1541206:-1
position: 1541206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

c8g
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: c8g
product: complement component 8, gamma polypeptide, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_048558529.1
SIO_010081: c8g
subclass of: SO_0000673
so part of: c8g
location: complement(join(1541065..1541206,1545970..1546005,1547487..1547588,1548637..1548738,1548816..1548886,1555715..1555851,1571665..1571898))
location: region:1541065-1571898:-1
so has part: feature:1571665-1571898:-1:exon
so has part: feature:1555715-1555851:-1:exon
so has part: feature:1548816-1548886:-1:exon
so has part: feature:1548637-1548738:-1:exon
so has part: feature:1547487-1547588:-1:exon
so has part: feature:1545970-1546005:-1:exon
so has part: feature:1541065-1541206:-1:exon

position:1541065:-1
position: 1541065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1571898:-1
position: 1571898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1571665-1571898:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1555715-1555851:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1548816-1548886:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1548637-1548738:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1547487-1547588:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1545970-1546005:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1541065-1541206:-1:exon

c8g
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: c8g
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: complement component C8 gamma chain isoform X1
translation: MKMPECLLDLPRLQTMGSIRLLCILCLIFSPCSRGTRSRRPNRRGEGPIDRIQAQNNFNVQQFTGVWHLISVGSKCSYLKLNNHRLEAVTMKVTNQDEDIRINTLRKLDGLCWDIKQDFRKGATPGRFSRTNRGLKTDIVIAETDYTNYAILFLQQRRKITVKLYGRGIEVSESVWSKFRQFVIDNNIPEIFIYAFPRYGHCSAADEFHLLDDDFGKS
SIO_010081: c8g
subclass of: SO_0000673
so part of: c8g
location: complement(join(1541184..1541206,1545970..1546005,1547487..1547588,1548637..1548738,1548816..1548886,1555715..1555851,1571665..1571850))
location: region:1541184-1571850:-1
so has part: feature:1571665-1571850:-1:exon
so has part: feature:1555715-1555851:-1:exon
so has part: feature:1548816-1548886:-1:exon
so has part: feature:1548637-1548738:-1:exon
so has part: feature:1547487-1547588:-1:exon
so has part: feature:1545970-1546005:-1:exon
so has part: feature:1541184-1541206:-1:exon

XP_048414486.1
type: Protein
SIO_000068: ncbiprotein

position:1541184:-1
position: 1541184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1571850:-1
position: 1571850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1571665-1571850:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1555715-1555851:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1548816-1548886:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1548637-1548738:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1547487-1547588:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1545970-1546005:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1541184-1541206:-1:exon

c8g
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: c8g
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: complement component C8 gamma chain isoform X2
translation: MKVTNQDEDIRINTLRKLDGLCWDIKQDFRKGATPGRFSRTNRGLKTDIVIAETDYTNYAILFLQQRRKITVKLYGRGIEVSESVWSKFRQFVIDNNIPEIFIYAFPRYGHCSAADEFHLLDDDFGKS
SIO_010081: c8g
subclass of: SO_0000673
so part of: c8g
location: complement(join(1541184..1541206,1545970..1546005,1547487..1547588,1548637..1548738,1548816..1548886,1555715..1555767))
location: region:1541184-1555767:-1
so has part: feature:1555715-1555767:-1:exon
so has part: feature:1548816-1548886:-1:exon
so has part: feature:1548637-1548738:-1:exon
so has part: feature:1547487-1547588:-1:exon
so has part: feature:1545970-1546005:-1:exon
so has part: feature:1541184-1541206:-1:exon

XP_048414487.1
type: Protein
SIO_000068: ncbiprotein

position:1555767:-1
position: 1555767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1555715-1555767:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1548816-1548886:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1548637-1548738:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1547487-1547588:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1545970-1546005:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1541184-1541206:-1:exon

fbxw5
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: fbxw5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1590290..1639061
location: region:1590290-1639061:1
so has part: feature:1590290-1639061:1:exon
subclass of: SO_0000010

125465577
type: Gene
SIO_000068: ncbigene

position:1590290:1
position: 1590290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1639061:1
position: 1639061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1590290-1639061:1:exon

fbxw5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: fbxw5
product: F-box and WD repeat domain containing 5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048559265.1
SIO_010081: fbxw5
subclass of: SO_0000673
so part of: fbxw5
location: join(1590290..1590761,1603783..1603999,1613203..1613360,1613543..1613717,1623587..1623735,1631595..1632060,1633884..1634031,1634165..1634377,1637021..1639061)
location: region:1590290-1639061:1
so has part: feature:1590290-1590761:1:exon
so has part: feature:1603783-1603999:1:exon
so has part: feature:1613203-1613360:1:exon
so has part: feature:1613543-1613717:1:exon
so has part: feature:1623587-1623735:1:exon
so has part: feature:1631595-1632060:1:exon
so has part: feature:1633884-1634031:1:exon
so has part: feature:1634165-1634377:1:exon
so has part: feature:1637021-1639061:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1590290-1590761:1:exon

position:1590761:1
position: 1590761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1603783-1603999:1:exon

position:1603783:1
position: 1603783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1603999:1
position: 1603999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1613203-1613360:1:exon

position:1613203:1
position: 1613203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1613360:1
position: 1613360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1613543-1613717:1:exon

position:1613543:1
position: 1613543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1613717:1
position: 1613717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1623587-1623735:1:exon

position:1623587:1
position: 1623587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1623735:1
position: 1623735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1631595-1632060:1:exon

position:1631595:1
position: 1631595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1632060:1
position: 1632060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1633884-1634031:1:exon

position:1633884:1
position: 1633884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1634031:1
position: 1634031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1634165-1634377:1:exon

position:1634165:1
position: 1634165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1634377:1
position: 1634377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1637021-1639061:1:exon

position:1637021:1
position: 1637021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

fbxw5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: fbxw5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/WD repeat-containing protein 5
translation: MEGGGLPQLPDTILLEVFLKLEHQDVLAAGTTCRQWYGVSRDEFLWKDLFYRYYNVNRSVPRHPAAVSWLGEFQRLYDTIPCVEVETLKEHRDQVLHVSFSHNGYLFGSCSKDCFVKVWSNDLEISVLHSANMRPYNWSYTQFSQFNAEDTLLLVSGVYIGPHSSSSGEIAVFSLDDFTLLSRVRNKPYDVFGCWLNETHLISGNLHWIGNMTSCSVLWLNKAYQDIESENINVVKRLFQLQNLNASTIRTVMVADCSRHDTPDLLLGSEGQPCDPTPRVFDLGSDSEDEVCSRAKCRTESPGEMTVSSQDDGQREGNVLSNGEQPLMDEKQIEARVAELFLQAKTKTADMTLLSEQQTTPDKKYLIFTTGSLTYTPHQIGIKQILPQHMTTSGPVLGEERSSNEFFDPLDYTIDVHGHIIGMGLSPDHRYLYVNSRAWPKGCIISDPMNPPPIAEEIDIHVFDLKTMREVTQTLRAHTAYTPNDECFFIFLDVSRDYVASGAEDRHGYIWDRHYNICLAKLQHEDVVNSVAFSPMDQEMLITASDDCTLKVWRSPRILRIISNKPIRKKLSFFWLNKK
SIO_010081: fbxw5
subclass of: SO_0000673
so part of: fbxw5
location: join(1603807..1603999,1613203..1613360,1613543..1613717,1623587..1623735,1631595..1632060,1633884..1634031,1634165..1634377,1637021..1637258)
location: region:1603807-1637258:1
so has part: feature:1603807-1603999:1:exon
so has part: feature:1613203-1613360:1:exon
so has part: feature:1613543-1613717:1:exon
so has part: feature:1623587-1623735:1:exon
so has part: feature:1631595-1632060:1:exon
so has part: feature:1633884-1634031:1:exon
so has part: feature:1634165-1634377:1:exon
so has part: feature:1637021-1637258:1:exon

XP_048415222.1
type: Protein
SIO_000068: ncbiprotein

position:1603807:1
position: 1603807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1637258:1
position: 1637258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1603807-1603999:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1613203-1613360:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1613543-1613717:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1623587-1623735:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1631595-1632060:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1633884-1634031:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1634165-1634377:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1637021-1637258:1:exon

traf2b
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: traf2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1657518..1686341)
location: region:1657518-1686341:-1
so has part: feature:1657518-1686341:-1:exon
subclass of: SO_0000010

125465532
type: Gene
SIO_000068: ncbigene

position:1657518:-1
position: 1657518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1686341:-1
position: 1686341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1657518-1686341:-1:exon

traf2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: traf2b
product: Tnf receptor-associated factor 2b, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_048559159.1
SIO_010081: traf2b
subclass of: SO_0000673
so part of: traf2b
location: complement(join(1657518..1657700,1658661..1659095,1664058..1664132,1664709..1664783,1667385..1667546,1674947..1675045,1676672..1676750,1684248..1684480,1686229..1686341))
location: region:1657518-1686341:-1
so has part: feature:1686229-1686341:-1:exon
so has part: feature:1684248-1684480:-1:exon
so has part: feature:1676672-1676750:-1:exon
so has part: feature:1674947-1675045:-1:exon
so has part: feature:1667385-1667546:-1:exon
so has part: feature:1664709-1664783:-1:exon
so has part: feature:1664058-1664132:-1:exon
so has part: feature:1658661-1659095:-1:exon
so has part: feature:1657518-1657700:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1686229-1686341:-1:exon

position:1686229:-1
position: 1686229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1684248-1684480:-1:exon

position:1684248:-1
position: 1684248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1684480:-1
position: 1684480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1676672-1676750:-1:exon

position:1676672:-1
position: 1676672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1676750:-1
position: 1676750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1674947-1675045:-1:exon

position:1674947:-1
position: 1674947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1675045:-1
position: 1675045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1667385-1667546:-1:exon

position:1667385:-1
position: 1667385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1667546:-1
position: 1667546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1664709-1664783:-1:exon

position:1664709:-1
position: 1664709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1664783:-1
position: 1664783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1664058-1664132:-1:exon

position:1664058:-1
position: 1664058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1664132:-1
position: 1664132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1658661-1659095:-1:exon

position:1658661:-1
position: 1658661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1659095:-1
position: 1659095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1657518-1657700:-1:exon

position:1657700:-1
position: 1657700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

traf2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: traf2b
product: Tnf receptor-associated factor 2b, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048559161.1
SIO_010081: traf2b
subclass of: SO_0000673
so part of: traf2b
location: complement(join(1657518..1657700,1658661..1659095,1664058..1664132,1664709..1664783,1667385..1667546,1674947..1675045,1676672..1676750,1684248..1684480,1684787..1685046,1685425..1686157))
location: region:1657518-1686157:-1
so has part: feature:1685425-1686157:-1:exon
so has part: feature:1684787-1685046:-1:exon
so has part: feature:1684248-1684480:-1:exon
so has part: feature:1676672-1676750:-1:exon
so has part: feature:1674947-1675045:-1:exon
so has part: feature:1667385-1667546:-1:exon
so has part: feature:1664709-1664783:-1:exon
so has part: feature:1664058-1664132:-1:exon
so has part: feature:1658661-1659095:-1:exon
so has part: feature:1657518-1657700:-1:exon

position:1686157:-1
position: 1686157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1685425-1686157:-1:exon

position:1685425:-1
position: 1685425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1684787-1685046:-1:exon

position:1684787:-1
position: 1684787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1685046:-1
position: 1685046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1684248-1684480:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1676672-1676750:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1674947-1675045:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1667385-1667546:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1664709-1664783:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1664058-1664132:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1658661-1659095:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1657518-1657700:-1:exon

traf2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: traf2b
product: Tnf receptor-associated factor 2b, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048559160.1
SIO_010081: traf2b
subclass of: SO_0000673
so part of: traf2b
location: complement(join(1657518..1657700,1658661..1659095,1664058..1664132,1664709..1664783,1667385..1667546,1674947..1675045,1676672..1676750,1684248..1684480,1685348..1686157))
location: region:1657518-1686157:-1
so has part: feature:1685348-1686157:-1:exon
so has part: feature:1684248-1684480:-1:exon
so has part: feature:1676672-1676750:-1:exon
so has part: feature:1674947-1675045:-1:exon
so has part: feature:1667385-1667546:-1:exon
so has part: feature:1664709-1664783:-1:exon
so has part: feature:1664058-1664132:-1:exon
so has part: feature:1658661-1659095:-1:exon
so has part: feature:1657518-1657700:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1685348-1686157:-1:exon

position:1685348:-1
position: 1685348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1684248-1684480:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1676672-1676750:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1674947-1675045:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1667385-1667546:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1664709-1664783:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1664058-1664132:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1658661-1659095:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1657518-1657700:-1:exon

traf2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: traf2b
product: Tnf receptor-associated factor 2b, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_048559158.1
SIO_010081: traf2b
subclass of: SO_0000673
so part of: traf2b
location: complement(join(1657518..1657700,1658661..1659095,1664058..1664132,1664709..1664783,1667385..1667546,1674947..1675045,1676672..1676750,1684248..1684480,1684787..1686157))
location: region:1657518-1686157:-1
so has part: feature:1684787-1686157:-1:exon
so has part: feature:1684248-1684480:-1:exon
so has part: feature:1676672-1676750:-1:exon
so has part: feature:1674947-1675045:-1:exon
so has part: feature:1667385-1667546:-1:exon
so has part: feature:1664709-1664783:-1:exon
so has part: feature:1664058-1664132:-1:exon
so has part: feature:1658661-1659095:-1:exon
so has part: feature:1657518-1657700:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1684787-1686157:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1684248-1684480:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1676672-1676750:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1674947-1675045:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1667385-1667546:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1664709-1664783:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1664058-1664132:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1658661-1659095:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1657518-1657700:-1:exon

traf2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: traf2b
product: Tnf receptor-associated factor 2b, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_048559162.1
SIO_010081: traf2b
subclass of: SO_0000673
so part of: traf2b
location: complement(join(1657518..1657700,1658661..1659095,1664058..1664132,1664709..1664783,1667385..1667546,1674947..1675045,1676672..1676750,1684248..1684480,1684653..1684760))
location: region:1657518-1684760:-1
so has part: feature:1684653-1684760:-1:exon
so has part: feature:1684248-1684480:-1:exon
so has part: feature:1676672-1676750:-1:exon
so has part: feature:1674947-1675045:-1:exon
so has part: feature:1667385-1667546:-1:exon
so has part: feature:1664709-1664783:-1:exon
so has part: feature:1664058-1664132:-1:exon
so has part: feature:1658661-1659095:-1:exon
so has part: feature:1657518-1657700:-1:exon

position:1684760:-1
position: 1684760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1684653-1684760:-1:exon

position:1684653:-1
position: 1684653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1684248-1684480:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1676672-1676750:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1674947-1675045:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1667385-1667546:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1664709-1664783:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1664058-1664132:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1658661-1659095:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1657518-1657700:-1:exon

traf2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: traf2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TNF receptor-associated factor 2
translation: MAARSERSPPNSLESQAAGNQSGFPKEILAAKVEGKYLCFECHGILRKPFQAQCGHRYCASCLKRIVSTGPQKCAACIQEDIYEEPLSLLDASSAFPDNAARREVENLPAVCNNESCTWKGTVKEYEADHEGRCEYTLRPCEACSKMVRQLDLPRHLERECPERNLNCKFCKSLFHHKDIKAHDEICSKFPLTCEWCGKKKIPREKYSDHIRTCGKVKFPCRFNVIGCEITAEKEKLAEHENLCVVDHMQMMLQHVMGIKTAVESLQPLHLQQARLKVNQLFTSIREMEETLGPLRSIGLGERGSSSPGEDLGKRYLSESLEDVQKRCVSLKHKAETFENIVCVLNREVERASVSMAAYEQQHKLDQEKIEALQAKVRQMERATALKDLSIAELELKLQALEHSTDNGIFIWKISDFSRRRQEAKTQRSPAIFSPG
SIO_010081: traf2b
subclass of: SO_0000673
so part of: traf2b
location: complement(join(1657518..1657700,1658661..1659095,1664058..1664132,1664709..1664783,1667385..1667546,1674947..1675045,1676672..1676750,1684248..1684450))
location: region:1657518-1684450:-1
so has part: feature:1684248-1684450:-1:exon
so has part: feature:1676672-1676750:-1:exon
so has part: feature:1674947-1675045:-1:exon
so has part: feature:1667385-1667546:-1:exon
so has part: feature:1664709-1664783:-1:exon
so has part: feature:1664058-1664132:-1:exon
so has part: feature:1658661-1659095:-1:exon
so has part: feature:1657518-1657700:-1:exon

XP_048415115.1
type: Protein
SIO_000068: ncbiprotein

position:1684450:-1
position: 1684450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1684248-1684450:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1676672-1676750:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1674947-1675045:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1667385-1667546:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1664709-1664783:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1664058-1664132:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1658661-1659095:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1657518-1657700:-1:exon

traf2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: traf2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TNF receptor-associated factor 2
translation: MAARSERSPPNSLESQAAGNQSGFPKEILAAKVEGKYLCFECHGILRKPFQAQCGHRYCASCLKRIVSTGPQKCAACIQEDIYEEPLSLLDASSAFPDNAARREVENLPAVCNNESCTWKGTVKEYEADHEGRCEYTLRPCEACSKMVRQLDLPRHLERECPERNLNCKFCKSLFHHKDIKAHDEICSKFPLTCEWCGKKKIPREKYSDHIRTCGKVKFPCRFNVIGCEITAEKEKLAEHENLCVVDHMQMMLQHVMGIKTAVESLQPLHLQQARLKVNQLFTSIREMEETLGPLRSIGLGERGSSSPGEDLGKRYLSESLEDVQKRCVSLKHKAETFENIVCVLNREVERASVSMAAYEQQHKLDQEKIEALQAKVRQMERATALKDLSIAELELKLQALEHSTDNGIFIWKISDFSRRRQEAKTQRSPAIFSPG
SIO_010081: traf2b
subclass of: SO_0000673
so part of: traf2b
location: complement(join(1657518..1657700,1658661..1659095,1664058..1664132,1664709..1664783,1667385..1667546,1674947..1675045,1676672..1676750,1684248..1684450))
location: region:1657518-1684450:-1
so has part: feature:1684248-1684450:-1:exon
so has part: feature:1676672-1676750:-1:exon
so has part: feature:1674947-1675045:-1:exon
so has part: feature:1667385-1667546:-1:exon
so has part: feature:1664709-1664783:-1:exon
so has part: feature:1664058-1664132:-1:exon
so has part: feature:1658661-1659095:-1:exon
so has part: feature:1657518-1657700:-1:exon

XP_048415116.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1684248-1684450:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1676672-1676750:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1674947-1675045:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1667385-1667546:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1664709-1664783:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1664058-1664132:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1658661-1659095:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1657518-1657700:-1:exon

traf2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: traf2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TNF receptor-associated factor 2
translation: MAARSERSPPNSLESQAAGNQSGFPKEILAAKVEGKYLCFECHGILRKPFQAQCGHRYCASCLKRIVSTGPQKCAACIQEDIYEEPLSLLDASSAFPDNAARREVENLPAVCNNESCTWKGTVKEYEADHEGRCEYTLRPCEACSKMVRQLDLPRHLERECPERNLNCKFCKSLFHHKDIKAHDEICSKFPLTCEWCGKKKIPREKYSDHIRTCGKVKFPCRFNVIGCEITAEKEKLAEHENLCVVDHMQMMLQHVMGIKTAVESLQPLHLQQARLKVNQLFTSIREMEETLGPLRSIGLGERGSSSPGEDLGKRYLSESLEDVQKRCVSLKHKAETFENIVCVLNREVERASVSMAAYEQQHKLDQEKIEALQAKVRQMERATALKDLSIAELELKLQALEHSTDNGIFIWKISDFSRRRQEAKTQRSPAIFSPG
SIO_010081: traf2b
subclass of: SO_0000673
so part of: traf2b
location: complement(join(1657518..1657700,1658661..1659095,1664058..1664132,1664709..1664783,1667385..1667546,1674947..1675045,1676672..1676750,1684248..1684450))
location: region:1657518-1684450:-1
so has part: feature:1684248-1684450:-1:exon
so has part: feature:1676672-1676750:-1:exon
so has part: feature:1674947-1675045:-1:exon
so has part: feature:1667385-1667546:-1:exon
so has part: feature:1664709-1664783:-1:exon
so has part: feature:1664058-1664132:-1:exon
so has part: feature:1658661-1659095:-1:exon
so has part: feature:1657518-1657700:-1:exon

XP_048415117.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1684248-1684450:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1676672-1676750:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1674947-1675045:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1667385-1667546:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1664709-1664783:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1664058-1664132:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1658661-1659095:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1657518-1657700:-1:exon

traf2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: traf2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TNF receptor-associated factor 2
translation: MAARSERSPPNSLESQAAGNQSGFPKEILAAKVEGKYLCFECHGILRKPFQAQCGHRYCASCLKRIVSTGPQKCAACIQEDIYEEPLSLLDASSAFPDNAARREVENLPAVCNNESCTWKGTVKEYEADHEGRCEYTLRPCEACSKMVRQLDLPRHLERECPERNLNCKFCKSLFHHKDIKAHDEICSKFPLTCEWCGKKKIPREKYSDHIRTCGKVKFPCRFNVIGCEITAEKEKLAEHENLCVVDHMQMMLQHVMGIKTAVESLQPLHLQQARLKVNQLFTSIREMEETLGPLRSIGLGERGSSSPGEDLGKRYLSESLEDVQKRCVSLKHKAETFENIVCVLNREVERASVSMAAYEQQHKLDQEKIEALQAKVRQMERATALKDLSIAELELKLQALEHSTDNGIFIWKISDFSRRRQEAKTQRSPAIFSPG
SIO_010081: traf2b
subclass of: SO_0000673
so part of: traf2b
location: complement(join(1657518..1657700,1658661..1659095,1664058..1664132,1664709..1664783,1667385..1667546,1674947..1675045,1676672..1676750,1684248..1684450))
location: region:1657518-1684450:-1
so has part: feature:1684248-1684450:-1:exon
so has part: feature:1676672-1676750:-1:exon
so has part: feature:1674947-1675045:-1:exon
so has part: feature:1667385-1667546:-1:exon
so has part: feature:1664709-1664783:-1:exon
so has part: feature:1664058-1664132:-1:exon
so has part: feature:1658661-1659095:-1:exon
so has part: feature:1657518-1657700:-1:exon

XP_048415118.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1684248-1684450:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1676672-1676750:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1674947-1675045:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1667385-1667546:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1664709-1664783:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1664058-1664132:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1658661-1659095:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1657518-1657700:-1:exon

traf2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: traf2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TNF receptor-associated factor 2
translation: MAARSERSPPNSLESQAAGNQSGFPKEILAAKVEGKYLCFECHGILRKPFQAQCGHRYCASCLKRIVSTGPQKCAACIQEDIYEEPLSLLDASSAFPDNAARREVENLPAVCNNESCTWKGTVKEYEADHEGRCEYTLRPCEACSKMVRQLDLPRHLERECPERNLNCKFCKSLFHHKDIKAHDEICSKFPLTCEWCGKKKIPREKYSDHIRTCGKVKFPCRFNVIGCEITAEKEKLAEHENLCVVDHMQMMLQHVMGIKTAVESLQPLHLQQARLKVNQLFTSIREMEETLGPLRSIGLGERGSSSPGEDLGKRYLSESLEDVQKRCVSLKHKAETFENIVCVLNREVERASVSMAAYEQQHKLDQEKIEALQAKVRQMERATALKDLSIAELELKLQALEHSTDNGIFIWKISDFSRRRQEAKTQRSPAIFSPG
SIO_010081: traf2b
subclass of: SO_0000673
so part of: traf2b
location: complement(join(1657518..1657700,1658661..1659095,1664058..1664132,1664709..1664783,1667385..1667546,1674947..1675045,1676672..1676750,1684248..1684450))
location: region:1657518-1684450:-1
so has part: feature:1684248-1684450:-1:exon
so has part: feature:1676672-1676750:-1:exon
so has part: feature:1674947-1675045:-1:exon
so has part: feature:1667385-1667546:-1:exon
so has part: feature:1664709-1664783:-1:exon
so has part: feature:1664058-1664132:-1:exon
so has part: feature:1658661-1659095:-1:exon
so has part: feature:1657518-1657700:-1:exon

XP_048415119.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1684248-1684450:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1676672-1676750:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1674947-1675045:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1667385-1667546:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1664709-1664783:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1664058-1664132:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1658661-1659095:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1657518-1657700:-1:exon

tmem141
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: tmem141
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1689887..1693562
location: region:1689887-1693562:1
so has part: feature:1689887-1693562:1:exon
subclass of: SO_0000010

125465411
type: Gene
SIO_000068: ncbigene

position:1689887:1
position: 1689887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1693562:1
position: 1693562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1689887-1693562:1:exon

tmem141
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: tmem141
product: transmembrane protein 141
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558876.1
SIO_010081: tmem141
subclass of: SO_0000673
so part of: tmem141
location: join(1689887..1690112,1690393..1690459,1690555..1690638,1691161..1691268,1692266..1693562)
location: region:1689887-1693562:1
so has part: feature:1689887-1690112:1:exon
so has part: feature:1690393-1690459:1:exon
so has part: feature:1690555-1690638:1:exon
so has part: feature:1691161-1691268:1:exon
so has part: feature:1692266-1693562:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1689887-1690112:1:exon

position:1690112:1
position: 1690112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1690393-1690459:1:exon

position:1690393:1
position: 1690393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1690459:1
position: 1690459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1690555-1690638:1:exon

position:1690555:1
position: 1690555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1690638:1
position: 1690638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1691161-1691268:1:exon

position:1691161:1
position: 1691161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1691268:1
position: 1691268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1692266-1693562:1:exon

position:1692266:1
position: 1692266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tmem141
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: tmem141
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 141
translation: MVNLGLRRVEDSVAAKHPALQEYAACQSHAFMKGIGTFILGTSGVFVMQTLLNKKIPLPMQWNVLLSVATGSLMSYIVTRLETQKCSNLWVYLETGTVPRSSDEVTKDQNNVSVESTDRGRKKTQYGDIMD
SIO_010081: tmem141
subclass of: SO_0000673
so part of: tmem141
location: join(1690059..1690112,1690393..1690459,1690555..1690638,1691161..1691268,1692266..1692348)
location: region:1690059-1692348:1
so has part: feature:1690059-1690112:1:exon
so has part: feature:1690393-1690459:1:exon
so has part: feature:1690555-1690638:1:exon
so has part: feature:1691161-1691268:1:exon
so has part: feature:1692266-1692348:1:exon

XP_048414833.1
type: Protein
SIO_000068: ncbiprotein

position:1690059:1
position: 1690059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1692348:1
position: 1692348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1690059-1690112:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1690393-1690459:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1690555-1690638:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1691161-1691268:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1692266-1692348:1:exon

LOC125465245
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125465245
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1713432..1785632
location: region:1713432-1785632:1
so has part: feature:1713432-1785632:1:exon
subclass of: SO_0000010

125465245
type: Gene
SIO_000068: ncbigene

position:1713432:1
position: 1713432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1785632:1
position: 1785632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1713432-1785632:1:exon

LOC125465245
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465245
product: coiled-coil domain-containing protein 183-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048558522.1
SIO_010081: LOC125465245
subclass of: SO_0000673
so part of: LOC125465245
location: join(1713432..1713665,1724817..1724984,1740372..1740476,1744126..1744248,1746887..1746997,1748938..1749007,1753560..1753651,1775570..1775730,1777039..1777204,1779817..1779942,1780769..1780853,1785460..1785632)
location: region:1713432-1785632:1
so has part: feature:1713432-1713665:1:exon
so has part: feature:1724817-1724984:1:exon
so has part: feature:1740372-1740476:1:exon
so has part: feature:1744126-1744248:1:exon
so has part: feature:1746887-1746997:1:exon
so has part: feature:1748938-1749007:1:exon
so has part: feature:1753560-1753651:1:exon
so has part: feature:1775570-1775730:1:exon
so has part: feature:1777039-1777204:1:exon
so has part: feature:1779817-1779942:1:exon
so has part: feature:1780769-1780853:1:exon
so has part: feature:1785460-1785632:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1713432-1713665:1:exon

position:1713665:1
position: 1713665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1724817-1724984:1:exon

position:1724817:1
position: 1724817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1724984:1
position: 1724984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1740372-1740476:1:exon

position:1740372:1
position: 1740372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1740476:1
position: 1740476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1744126-1744248:1:exon

position:1744126:1
position: 1744126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1744248:1
position: 1744248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1746887-1746997:1:exon

position:1746887:1
position: 1746887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1746997:1
position: 1746997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1748938-1749007:1:exon

position:1748938:1
position: 1748938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1749007:1
position: 1749007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1753560-1753651:1:exon

position:1753560:1
position: 1753560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1753651:1
position: 1753651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1775570-1775730:1:exon

position:1775570:1
position: 1775570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1775730:1
position: 1775730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1777039-1777204:1:exon

position:1777039:1
position: 1777039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1777204:1
position: 1777204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1779817-1779942:1:exon

position:1779817:1
position: 1779817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1779942:1
position: 1779942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1780769-1780853:1:exon

position:1780769:1
position: 1780769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1780853:1
position: 1780853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1785460-1785632:1:exon

position:1785460:1
position: 1785460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125465245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465245
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 183-like
translation: MDLMQTLRSVRKETQFDAGEHNDLQIIRQIENKIEKMDTKVQVAKQIYQMYQNILECLQRDAAYIPQRVDSFSAIVDAHKAELTALAQVSREAAEARKNMWIELDALEKSYSTEKKERETILSNRRKLLNLEKYALKRIDASSLRSGQSSAGGLRTRRSFTEYGSRVHSGSEITIVSEINKLKELMTCSKIQDIEQRINMQSATSDYLQWKLSQRKEKRNQLNKDLEDLMLEHAELKFDPNKTIASLTILKAGTEQQLKLEKEKLAMVLTQLCNSERLLLSIESGIDNLYYSLYGIPGTTEISTGEPQDTYEKLHICEEKLIFLENKVRNFIVDEWMLTEQEKLTELIEKTFGENEMNRNVMVDIDDFEIQDDLDYLAAGTDGILTREEIKRRSELLVQDKTRIVRRVKKKGRKRYVSKKKVICDMGV
SIO_010081: LOC125465245
subclass of: SO_0000673
so part of: LOC125465245
location: join(1724910..1724984,1740372..1740476,1744126..1744248,1746887..1746997,1748938..1749007,1753560..1753651,1775570..1775730,1777039..1777204,1779817..1779942,1780769..1780853,1785460..1785632)
location: region:1724910-1785632:1
so has part: feature:1724910-1724984:1:exon
so has part: feature:1740372-1740476:1:exon
so has part: feature:1744126-1744248:1:exon
so has part: feature:1746887-1746997:1:exon
so has part: feature:1748938-1749007:1:exon
so has part: feature:1753560-1753651:1:exon
so has part: feature:1775570-1775730:1:exon
so has part: feature:1777039-1777204:1:exon
so has part: feature:1779817-1779942:1:exon
so has part: feature:1780769-1780853:1:exon
so has part: feature:1785460-1785632:1:exon

XP_048414479.1
type: Protein
SIO_000068: ncbiprotein

position:1724910:1
position: 1724910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1724910-1724984:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1740372-1740476:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1744126-1744248:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1746887-1746997:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1748938-1749007:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1753560-1753651:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1775570-1775730:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1777039-1777204:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1779817-1779942:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1780769-1780853:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1785460-1785632:1:exon

LOC125465439
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125465439
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1792850..1909082
location: region:1792850-1909082:1
so has part: feature:1792850-1909082:1:exon
subclass of: SO_0000010

125465439
type: Gene
SIO_000068: ncbigene

position:1792850:1
position: 1792850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1909082:1
position: 1909082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1792850-1909082:1:exon

LOC125465439
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465439
product: rab-like protein 6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558966.1
SIO_010081: LOC125465439
subclass of: SO_0000673
so part of: LOC125465439
location: join(1792850..1793076,1797142..1797276,1805322..1805369,1820007..1820059,1829369..1829460,1830389..1830529,1861565..1861670,1876046..1876149,1887737..1888101,1889669..1889816,1890164..1890340,1892250..1892580,1894538..1894715,1903938..1903996,1904646..1909082)
location: region:1792850-1909082:1
so has part: feature:1792850-1793076:1:exon
so has part: feature:1797142-1797276:1:exon
so has part: feature:1805322-1805369:1:exon
so has part: feature:1820007-1820059:1:exon
so has part: feature:1829369-1829460:1:exon
so has part: feature:1830389-1830529:1:exon
so has part: feature:1861565-1861670:1:exon
so has part: feature:1876046-1876149:1:exon
so has part: feature:1887737-1888101:1:exon
so has part: feature:1889669-1889816:1:exon
so has part: feature:1890164-1890340:1:exon
so has part: feature:1892250-1892580:1:exon
so has part: feature:1894538-1894715:1:exon
so has part: feature:1903938-1903996:1:exon
so has part: feature:1904646-1909082:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1792850-1793076:1:exon

position:1793076:1
position: 1793076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1797142-1797276:1:exon

position:1797142:1
position: 1797142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1797276:1
position: 1797276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1805322-1805369:1:exon

position:1805322:1
position: 1805322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1805369:1
position: 1805369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1820007-1820059:1:exon

position:1820007:1
position: 1820007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1820059:1
position: 1820059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1829369-1829460:1:exon

position:1829369:1
position: 1829369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1829460:1
position: 1829460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1830389-1830529:1:exon

position:1830389:1
position: 1830389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1830529:1
position: 1830529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1861565-1861670:1:exon

position:1861565:1
position: 1861565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1861670:1
position: 1861670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1876046-1876149:1:exon

position:1876046:1
position: 1876046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1876149:1
position: 1876149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1887737-1888101:1:exon

position:1887737:1
position: 1887737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1888101:1
position: 1888101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1889669-1889816:1:exon

position:1889669:1
position: 1889669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1889816:1
position: 1889816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1890164-1890340:1:exon

position:1890164:1
position: 1890164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1890340:1
position: 1890340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1892250-1892580:1:exon

position:1892250:1
position: 1892250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1892580:1
position: 1892580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1894538-1894715:1:exon

position:1894538:1
position: 1894538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1894715:1
position: 1894715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1903938-1903996:1:exon

position:1903938:1
position: 1903938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1903996:1
position: 1903996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1904646-1909082:1:exon

position:1904646:1
position: 1904646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125465439
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465439
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rab-like protein 6
translation: MFSALKKLVGTEQAPTRDRIIPAGLQSMNQSLQRRFAKGVQYNMKILIRGDRNTGKTTLWHRLQGKKFVEQYIPTQEIQVTCIHWSYKTTDDIVKVEVWDIVDKGKSRKKGDGLKLENDPQESDAEPALDAEFLDVYKNCNGVIMMFDITKQWTFSYIMKELPKVPDHIPVCVLGNHRDMGEHRVILPDDVRDFIKSSNRSPRSSYIRYAESSMRNGFGLKYLHKFFNIPFLQLQRETLLRQLETNQLDIDATLEELSVQNETEDQNYELFLELMETKNRGFNSPIATNGQSPSSGSQSPVVPPSSASTTNSSPGTPQAPVQASPTPPMSPPPASGSPLTDPGLAPEVSPTPLNAPPVASSNQAAPVTQRRSFISRLFGPSSTPEPPVTKADTTSPISPEGEVKTQNVDDFAPDEGIDKSFLEDPPPQKESNCGTQQDSDSDGERKGNPMVTDFQDDLDLDDQMLQDPSVKSQIPSKNITLSSDEDESAKVTVCPDSPKRASKSLLKSQGRAPTKAFKQDLSISSSAIKSASSLSGNSFLTSAPPLASPLIPVPASLHTTEGKGQSKLTTQECGESSESDLEGPIAKQLLSFVMDDPDFESDDSNRKNTTETFPVREDSSELSNDEFSLGKLSVPVKPSTQTKKQTTDFDLFGLGIDTKTPAAPESSNEEKTSKGSSKEKKKKKKKTREEDEKLEKKRHKPRKSKEKEKDETEERPKKEKQVTSDDKRRRKKVKTKDKADEDMEDLEKFLIGSGDSHVVRSKGSGDYEEL
SIO_010081: LOC125465439
subclass of: SO_0000673
so part of: LOC125465439
location: join(1792947..1793076,1797142..1797276,1805322..1805369,1820007..1820059,1829369..1829460,1830389..1830529,1861565..1861670,1876046..1876149,1887737..1888101,1889669..1889816,1890164..1890340,1892250..1892580,1894538..1894715,1903938..1903996,1904646..1904891)
location: region:1792947-1904891:1
so has part: feature:1792947-1793076:1:exon
so has part: feature:1797142-1797276:1:exon
so has part: feature:1805322-1805369:1:exon
so has part: feature:1820007-1820059:1:exon
so has part: feature:1829369-1829460:1:exon
so has part: feature:1830389-1830529:1:exon
so has part: feature:1861565-1861670:1:exon
so has part: feature:1876046-1876149:1:exon
so has part: feature:1887737-1888101:1:exon
so has part: feature:1889669-1889816:1:exon
so has part: feature:1890164-1890340:1:exon
so has part: feature:1892250-1892580:1:exon
so has part: feature:1894538-1894715:1:exon
so has part: feature:1903938-1903996:1:exon
so has part: feature:1904646-1904891:1:exon

XP_048414923.1
type: Protein
SIO_000068: ncbiprotein

position:1792947:1
position: 1792947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1904891:1
position: 1904891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1792947-1793076:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1797142-1797276:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1805322-1805369:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1820007-1820059:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1829369-1829460:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1830389-1830529:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1861565-1861670:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1876046-1876149:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1887737-1888101:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1889669-1889816:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1890164-1890340:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1892250-1892580:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1894538-1894715:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1903938-1903996:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1904646-1904891:1:exon

LOC125465246
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125465246
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1991720..2029304
location: region:1991720-2029304:1
so has part: feature:1991720-2029304:1:exon
subclass of: SO_0000010

125465246
type: Gene
SIO_000068: ncbigene

position:1991720:1
position: 1991720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2029304:1
position: 2029304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1991720-2029304:1:exon

LOC125465246
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465246
product: sodium-dependent phosphate transport protein 2C-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048558523.1
SIO_010081: LOC125465246
subclass of: SO_0000673
so part of: LOC125465246
location: join(1991720..1991746,1998764..1998870,2001427..2001555,2001643..2001771,2003556..2003699,2004154..2004265,2008156..2008351,2011376..2011471,2018433..2018520,2019435..2019551,2020625..2020749,2026074..2029304)
location: region:1991720-2029304:1
so has part: feature:1991720-1991746:1:exon
so has part: feature:1998764-1998870:1:exon
so has part: feature:2001427-2001555:1:exon
so has part: feature:2001643-2001771:1:exon
so has part: feature:2003556-2003699:1:exon
so has part: feature:2004154-2004265:1:exon
so has part: feature:2008156-2008351:1:exon
so has part: feature:2011376-2011471:1:exon
so has part: feature:2018433-2018520:1:exon
so has part: feature:2019435-2019551:1:exon
so has part: feature:2020625-2020749:1:exon
so has part: feature:2026074-2029304:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1991720-1991746:1:exon

position:1991746:1
position: 1991746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1998764-1998870:1:exon

position:1998764:1
position: 1998764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1998870:1
position: 1998870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2001427-2001555:1:exon

position:2001427:1
position: 2001427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2001555:1
position: 2001555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2001643-2001771:1:exon

position:2001643:1
position: 2001643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2001771:1
position: 2001771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2003556-2003699:1:exon

position:2003556:1
position: 2003556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2003699:1
position: 2003699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2004154-2004265:1:exon

position:2004154:1
position: 2004154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2004265:1
position: 2004265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2008156-2008351:1:exon

position:2008156:1
position: 2008156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2008351:1
position: 2008351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2011376-2011471:1:exon

position:2011376:1
position: 2011376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2011471:1
position: 2011471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2018433-2018520:1:exon

position:2018433:1
position: 2018433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2018520:1
position: 2018520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2019435-2019551:1:exon

position:2019435:1
position: 2019435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2019551:1
position: 2019551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2020625-2020749:1:exon

position:2020625:1
position: 2020625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2020749:1
position: 2020749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2026074-2029304:1:exon

position:2026074:1
position: 2026074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125465246
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465246
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium-dependent phosphate transport protein 2C-like
translation: MPPFNSNSIHSEEFSFGDSAKIDPTPATFSENVITVADPVQLEDDGVKEEVAEIEEDDPWTLPQLQNQGPQWSDLDRVGKMKHVIKRIIMAVLLIAFLYAFVCSLDVLSSAFQLVGGKAAGDIFGDNTILANPIAGLMLGVLVTILVQSSSTSSSIVVSMVSSGLLSVEASIPIIMGVNVGTSVTSTLVSLAQSGERNEFRRAFAGSAVHGIFNWMTVIVLLPIEIGTGFLYQVSKVCIKSFNIQSGETAPDILKVITEPFTHLIIQLDKSVISAIATGEAGARNRSLIRKWCKFNKLTKALNVSVRDAFILYPVVLFRLAIDSWSLFDFPYPFGWLNGYLAILVGAVMTFILQSSSVFTSAIVPLIGIGVISLKRAYPLCLGSNIGTTTTAILAALASPAEQLGNAVQVALIHLFFNLAGILIWYCIPHMRIPIQLAKVFGNVTARYRWFPIMYLLLSFILIPGTLFGLSMAGWIVLGAIAGPILIIVILVVIINVIQKKCPQILPSKLRSWDFLPLWMHSFSPLDRVLTACCAHCCCQCCRPITDNSQKSITDQPQKHAPSKESHCYDNTVNIESAHL
SIO_010081: LOC125465246
subclass of: SO_0000673
so part of: LOC125465246
location: join(1998780..1998870,2001427..2001555,2001643..2001771,2003556..2003699,2004154..2004265,2008156..2008351,2011376..2011471,2018433..2018520,2019435..2019551,2020625..2020749,2026074..2026589)
location: region:1998780-2026589:1
so has part: feature:1998780-1998870:1:exon
so has part: feature:2001427-2001555:1:exon
so has part: feature:2001643-2001771:1:exon
so has part: feature:2003556-2003699:1:exon
so has part: feature:2004154-2004265:1:exon
so has part: feature:2008156-2008351:1:exon
so has part: feature:2011376-2011471:1:exon
so has part: feature:2018433-2018520:1:exon
so has part: feature:2019435-2019551:1:exon
so has part: feature:2020625-2020749:1:exon
so has part: feature:2026074-2026589:1:exon

XP_048414480.1
type: Protein
SIO_000068: ncbiprotein

position:1998780:1
position: 1998780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2026589:1
position: 2026589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1998780-1998870:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2001427-2001555:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2001643-2001771:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2003556-2003699:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2004154-2004265:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2008156-2008351:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2011376-2011471:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2018433-2018520:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2019435-2019551:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2020625-2020749:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2026074-2026589:1:exon

trnag-gcc
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: trnag-gcc
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(2007521..2007591)
location: region:2007521-2007591:-1
so has part: feature:2007521-2007591:-1:exon
subclass of: SO_0000663

125465614
type: Gene
SIO_000068: ncbigene

position:2007521:-1
position: 2007521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2007591:-1
position: 2007591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2007521-2007591:-1:exon

trnag-gcc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 378071
gene: trnag-gcc
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA glycine (anticodon GCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(2007557..2007559),aa:Gly, seq:gcc)
SIO_010081: trnag-gcc
subclass of: SO_0000673
so part of: trnag-gcc
location: complement(2007521..2007591)
location: region:2007521-2007591:-1
so has part: feature:2007521-2007591:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2007521-2007591:-1:exon

LOC125465531
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125465531
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2037421..2064919
location: region:2037421-2064919:1
so has part: feature:2037421-2064919:1:exon
subclass of: SO_0000010

125465531
type: Gene
SIO_000068: ncbigene

position:2037421:1
position: 2037421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2064919:1
position: 2064919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2037421-2064919:1:exon

LOC125465531
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465531
product: protein FAM166A-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048559157.1
SIO_010081: LOC125465531
subclass of: SO_0000673
so part of: LOC125465531
location: join(2037421..2037516,2041235..2041452,2050302..2050450,2052291..2052426,2054954..2055048,2057733..2057841,2064683..2064919)
location: region:2037421-2064919:1
so has part: feature:2037421-2037516:1:exon
so has part: feature:2041235-2041452:1:exon
so has part: feature:2050302-2050450:1:exon
so has part: feature:2052291-2052426:1:exon
so has part: feature:2054954-2055048:1:exon
so has part: feature:2057733-2057841:1:exon
so has part: feature:2064683-2064919:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2037421-2037516:1:exon

position:2037516:1
position: 2037516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2041235-2041452:1:exon

position:2041235:1
position: 2041235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2041452:1
position: 2041452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2050302-2050450:1:exon

position:2050302:1
position: 2050302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2050450:1
position: 2050450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2052291-2052426:1:exon

position:2052291:1
position: 2052291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2052426:1
position: 2052426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2054954-2055048:1:exon

position:2054954:1
position: 2054954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2055048:1
position: 2055048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2057733-2057841:1:exon

position:2057733:1
position: 2057733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2057841:1
position: 2057841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2064683-2064919:1:exon

position:2064683:1
position: 2064683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125465531
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465531
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM166A-like
translation: MDIQKQTLFTPEPHYIPGYTGYAHTIPFRFGKTYGRITHDILKNPKTAQADHTLLSPTTGGPDYQPEYSDYCPPDVSDQIHPQKLVPGYTGYVPQKAFNYGGNYYQETLQCGLDLRRKQMEYAQKLKEPVLITYVDGRRKVAVLGENRPLKPLAPNVDPLVWTHLYKHKHEFTTQPPELQRRNISGYMGFIPHMGYEFGHTYKDQAKTAMDKFQRKQYLVRNKLKGCPEELPQPENKLYTPTPMVPKYGGHVPGANFDIGSTFGKNSRIAHRQIHCL
SIO_010081: LOC125465531
subclass of: SO_0000673
so part of: LOC125465531
location: join(2037464..2037516,2041235..2041452,2050302..2050450,2052291..2052426,2054954..2055048,2057733..2057841,2064683..2064756)
location: region:2037464-2064756:1
so has part: feature:2037464-2037516:1:exon
so has part: feature:2041235-2041452:1:exon
so has part: feature:2050302-2050450:1:exon
so has part: feature:2052291-2052426:1:exon
so has part: feature:2054954-2055048:1:exon
so has part: feature:2057733-2057841:1:exon
so has part: feature:2064683-2064756:1:exon

XP_048415114.1
type: Protein
SIO_000068: ncbiprotein

position:2037464:1
position: 2037464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2064756:1
position: 2064756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2037464-2037516:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2041235-2041452:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2050302-2050450:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2052291-2052426:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2054954-2055048:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2057733-2057841:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2064683-2064756:1:exon

LOC125465369
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125465369
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2080792..2091656)
location: region:2080792-2091656:-1
so has part: feature:2080792-2091656:-1:exon
subclass of: SO_0000010

125465369
type: Gene
SIO_000068: ncbigene

position:2080792:-1
position: 2080792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2091656:-1
position: 2091656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2080792-2091656:-1:exon

LOC125465369
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465369
product: tubulin beta-4B chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 599 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048558786.1
SIO_010081: LOC125465369
subclass of: SO_0000673
so part of: LOC125465369
location: complement(join(2080792..2081933,2086315..2086425,2086510..2086618,2091564..2091656))
location: region:2080792-2091656:-1
so has part: feature:2091564-2091656:-1:exon
so has part: feature:2086510-2086618:-1:exon
so has part: feature:2086315-2086425:-1:exon
so has part: feature:2080792-2081933:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2091564-2091656:-1:exon

position:2091564:-1
position: 2091564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2086510-2086618:-1:exon

position:2086510:-1
position: 2086510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2086618:-1
position: 2086618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2086315-2086425:-1:exon

position:2086315:-1
position: 2086315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2086425:-1
position: 2086425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2080792-2081933:-1:exon

position:2081933:-1
position: 2081933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125465369
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465369
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin beta-4B chain-like
translation: MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGAYHGDSDLQLERINVYYNEATGGKYVPRAILMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTDGAELIDSVLDVVRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFHTLKLTTPTYGDLNHLMSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMTGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSTYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATVGDEGEFEEEGEEEAA
SIO_010081: LOC125465369
subclass of: SO_0000673
so part of: LOC125465369
location: complement(join(2080873..2081933,2086315..2086425,2086510..2086618,2091564..2091620))
location: region:2080873-2091620:-1
so has part: feature:2091564-2091620:-1:exon
so has part: feature:2086510-2086618:-1:exon
so has part: feature:2086315-2086425:-1:exon
so has part: feature:2080873-2081933:-1:exon

XP_048414743.1
type: Protein
SIO_000068: ncbiprotein

position:2080873:-1
position: 2080873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2091620:-1
position: 2091620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2091564-2091620:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2086510-2086618:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2086315-2086425:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2080873-2081933:-1:exon

LOC125465370
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125465370
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2106859..2169290)
location: region:2106859-2169290:-1
so has part: feature:2106859-2169290:-1:exon
subclass of: SO_0000010

125465370
type: Gene
SIO_000068: ncbigene

position:2106859:-1
position: 2106859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2169290:-1
position: 2169290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2106859-2169290:-1:exon

LOC125465370
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465370
product: tubulin beta chain-like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 21% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048558793.1
SIO_010081: LOC125465370
subclass of: SO_0000673
so part of: LOC125465370
location: complement(join(2106859..2107052,2107911..2107990,2110737..2110847,2136149..2136257,2169234..2169290))
location: region:2106859-2169290:-1
so has part: feature:2169234-2169290:-1:exon
so has part: feature:2136149-2136257:-1:exon
so has part: feature:2110737-2110847:-1:exon
so has part: feature:2107911-2107990:-1:exon
so has part: feature:2106859-2107052:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2169234-2169290:-1:exon

position:2169234:-1
position: 2169234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2136149-2136257:-1:exon

position:2136149:-1
position: 2136149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2136257:-1
position: 2136257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2110737-2110847:-1:exon

position:2110737:-1
position: 2110737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2110847:-1
position: 2110847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2107911-2107990:-1:exon

position:2107911:-1
position: 2107911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2107990:-1
position: 2107990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2106859-2107052:-1:exon

position:2107052:-1
position: 2107052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125465370
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465370
product: tubulin beta chain-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 37% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048558791.1
SIO_010081: LOC125465370
subclass of: SO_0000673
so part of: LOC125465370
location: complement(join(2106859..2107292,2107899..2107990,2110737..2110847,2136149..2136257,2169234..2169290))
location: region:2106859-2169290:-1
so has part: feature:2169234-2169290:-1:exon
so has part: feature:2136149-2136257:-1:exon
so has part: feature:2110737-2110847:-1:exon
so has part: feature:2107899-2107990:-1:exon
so has part: feature:2106859-2107292:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2169234-2169290:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2136149-2136257:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2110737-2110847:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2107899-2107990:-1:exon

position:2107899:-1
position: 2107899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2106859-2107292:-1:exon

position:2107292:-1
position: 2107292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125465370
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465370
product: tubulin beta chain-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 38% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048558792.1
SIO_010081: LOC125465370
subclass of: SO_0000673
so part of: LOC125465370
location: complement(join(2106859..2107141,2107868..2107990,2110737..2110847,2136149..2136257,2169234..2169290))
location: region:2106859-2169290:-1
so has part: feature:2169234-2169290:-1:exon
so has part: feature:2136149-2136257:-1:exon
so has part: feature:2110737-2110847:-1:exon
so has part: feature:2107868-2107990:-1:exon
so has part: feature:2106859-2107141:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2169234-2169290:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2136149-2136257:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2110737-2110847:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2107868-2107990:-1:exon

position:2107868:-1
position: 2107868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2106859-2107141:-1:exon

position:2107141:-1
position: 2107141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125465370
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465370
product: tubulin beta chain-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 50% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048558790.1
SIO_010081: LOC125465370
subclass of: SO_0000673
so part of: LOC125465370
location: complement(join(2106859..2107189,2107667..2107990,2110737..2110847,2136149..2136257,2169234..2169290))
location: region:2106859-2169290:-1
so has part: feature:2169234-2169290:-1:exon
so has part: feature:2136149-2136257:-1:exon
so has part: feature:2110737-2110847:-1:exon
so has part: feature:2107667-2107990:-1:exon
so has part: feature:2106859-2107189:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2169234-2169290:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2136149-2136257:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2110737-2110847:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2107667-2107990:-1:exon

position:2107667:-1
position: 2107667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2106859-2107189:-1:exon

position:2107189:-1
position: 2107189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125465370
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465370
product: tubulin beta chain-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 51% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048558789.1
SIO_010081: LOC125465370
subclass of: SO_0000673
so part of: LOC125465370
location: complement(join(2106859..2107189,2107637..2107990,2110737..2110847,2136149..2136257,2169234..2169290))
location: region:2106859-2169290:-1
so has part: feature:2169234-2169290:-1:exon
so has part: feature:2136149-2136257:-1:exon
so has part: feature:2110737-2110847:-1:exon
so has part: feature:2107637-2107990:-1:exon
so has part: feature:2106859-2107189:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2169234-2169290:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2136149-2136257:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2110737-2110847:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2107637-2107990:-1:exon

position:2107637:-1
position: 2107637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2106859-2107189:-1:exon

LOC125465370
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465370
product: tubulin beta chain-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 626 Proteins, and 46% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048558787.1
SIO_010081: LOC125465370
subclass of: SO_0000673
so part of: LOC125465370
location: complement(join(2106859..2107990,2110737..2110847,2136149..2136257,2169234..2169290))
location: region:2106859-2169290:-1
so has part: feature:2169234-2169290:-1:exon
so has part: feature:2136149-2136257:-1:exon
so has part: feature:2110737-2110847:-1:exon
so has part: feature:2106859-2107990:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2169234-2169290:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2136149-2136257:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2110737-2110847:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2106859-2107990:-1:exon

LOC125465370
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465370
product: tubulin beta chain-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins, and 46% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048558788.1
SIO_010081: LOC125465370
subclass of: SO_0000673
so part of: LOC125465370
location: complement(join(2106859..2107990,2110737..2110847,2134289..2134297,2136149..2136257,2169234..2169290))
location: region:2106859-2169290:-1
so has part: feature:2169234-2169290:-1:exon
so has part: feature:2136149-2136257:-1:exon
so has part: feature:2134289-2134297:-1:exon
so has part: feature:2110737-2110847:-1:exon
so has part: feature:2106859-2107990:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2169234-2169290:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2136149-2136257:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2134289-2134297:-1:exon

position:2134289:-1
position: 2134289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2134297:-1
position: 2134297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2110737-2110847:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2106859-2107990:-1:exon

LOC125465370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465370
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin beta chain-like isoform X7
translation: MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVTEFTEAESNMNDLVSEYQQYQDATSGEEAEEEELGGEEN
SIO_010081: LOC125465370
subclass of: SO_0000673
so part of: LOC125465370
location: complement(join(2106933..2107052,2107911..2107990,2110737..2110847,2136149..2136257,2169234..2169290))
location: region:2106933-2169290:-1
so has part: feature:2169234-2169290:-1:exon
so has part: feature:2136149-2136257:-1:exon
so has part: feature:2110737-2110847:-1:exon
so has part: feature:2107911-2107990:-1:exon
so has part: feature:2106933-2107052:-1:exon

XP_048414750.1
type: Protein
SIO_000068: ncbiprotein

position:2106933:-1
position: 2106933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2169234-2169290:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2136149-2136257:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2110737-2110847:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2107911-2107990:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2106933-2107052:-1:exon

LOC125465370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465370
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin beta chain-like isoform X5
translation: MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEVDEQMLNVQNKNSTYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMEETEFTEAESNMNDLVSEYQQYQDATSGEEAEEEELGGEEN
SIO_010081: LOC125465370
subclass of: SO_0000673
so part of: LOC125465370
location: complement(join(2106933..2107292,2107899..2107990,2110737..2110847,2136149..2136257,2169234..2169290))
location: region:2106933-2169290:-1
so has part: feature:2169234-2169290:-1:exon
so has part: feature:2136149-2136257:-1:exon
so has part: feature:2110737-2110847:-1:exon
so has part: feature:2107899-2107990:-1:exon
so has part: feature:2106933-2107292:-1:exon

XP_048414748.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2169234-2169290:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2136149-2136257:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2110737-2110847:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2107899-2107990:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2106933-2107292:-1:exon

LOC125465370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465370
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin beta chain-like isoform X6
translation: MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLFKRISEQFTAMFRRKAFLHWYTGEGMEETEFTEAESNMNDLVSEYQQYQDATSGEEAEEEELGGEEN
SIO_010081: LOC125465370
subclass of: SO_0000673
so part of: LOC125465370
location: complement(join(2106933..2107141,2107868..2107990,2110737..2110847,2136149..2136257,2169234..2169290))
location: region:2106933-2169290:-1
so has part: feature:2169234-2169290:-1:exon
so has part: feature:2136149-2136257:-1:exon
so has part: feature:2110737-2110847:-1:exon
so has part: feature:2107868-2107990:-1:exon
so has part: feature:2106933-2107141:-1:exon

XP_048414749.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2169234-2169290:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2136149-2136257:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2110737-2110847:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2107868-2107990:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2106933-2107141:-1:exon

LOC125465370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465370
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin beta chain-like isoform X4
translation: MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGAGMGTLLISKIREEYPDRIMNTFSIVPSPKVSDTVVEPYNATLSVHQLVENTDETYCLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMEETEFTEAESNMNDLVSEYQQYQDATSGEEAEEEELGGEEN
SIO_010081: LOC125465370
subclass of: SO_0000673
so part of: LOC125465370
location: complement(join(2106933..2107189,2107667..2107990,2110737..2110847,2136149..2136257,2169234..2169290))
location: region:2106933-2169290:-1
so has part: feature:2169234-2169290:-1:exon
so has part: feature:2136149-2136257:-1:exon
so has part: feature:2110737-2110847:-1:exon
so has part: feature:2107667-2107990:-1:exon
so has part: feature:2106933-2107189:-1:exon

XP_048414747.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2169234-2169290:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2136149-2136257:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2110737-2110847:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2107667-2107990:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2106933-2107189:-1:exon

LOC125465370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465370
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin beta-4B chain-like isoform X3
translation: MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGAGMGTLLISKIREEYPDRIMNTFSIVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMEETEFTEAESNMNDLVSEYQQYQDATSGEEAEEEELGGEEN
SIO_010081: LOC125465370
subclass of: SO_0000673
so part of: LOC125465370
location: complement(join(2106933..2107189,2107637..2107990,2110737..2110847,2136149..2136257,2169234..2169290))
location: region:2106933-2169290:-1
so has part: feature:2169234-2169290:-1:exon
so has part: feature:2136149-2136257:-1:exon
so has part: feature:2110737-2110847:-1:exon
so has part: feature:2107637-2107990:-1:exon
so has part: feature:2106933-2107189:-1:exon

XP_048414746.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2169234-2169290:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2136149-2136257:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2110737-2110847:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2107637-2107990:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2106933-2107189:-1:exon

LOC125465370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465370
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin beta chain-like isoform X1
translation: MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGAGMGTLLISKIREEYPDRIMNTFSIVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFVPGFTPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSTYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMEETEFTEAESNMNDLVSEYQQYQDATSGEEAEEEELGGEEN
SIO_010081: LOC125465370
subclass of: SO_0000673
so part of: LOC125465370
location: complement(join(2106933..2107990,2110737..2110847,2136149..2136257,2169234..2169290))
location: region:2106933-2169290:-1
so has part: feature:2169234-2169290:-1:exon
so has part: feature:2136149-2136257:-1:exon
so has part: feature:2110737-2110847:-1:exon
so has part: feature:2106933-2107990:-1:exon

XP_048414744.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2169234-2169290:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2136149-2136257:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2110737-2110847:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2106933-2107990:-1:exon

LOC125465370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465370
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin beta chain-like isoform X2
translation: MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATASTGGKYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGAGMGTLLISKIREEYPDRIMNTFSIVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFVPGFTPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSTYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMEETEFTEAESNMNDLVSEYQQYQDATSGEEAEEEELGGEEN
SIO_010081: LOC125465370
subclass of: SO_0000673
so part of: LOC125465370
location: complement(join(2106933..2107990,2110737..2110847,2134289..2134297,2136149..2136257,2169234..2169290))
location: region:2106933-2169290:-1
so has part: feature:2169234-2169290:-1:exon
so has part: feature:2136149-2136257:-1:exon
so has part: feature:2134289-2134297:-1:exon
so has part: feature:2110737-2110847:-1:exon
so has part: feature:2106933-2107990:-1:exon

XP_048414745.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2169234-2169290:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2136149-2136257:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2134289-2134297:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2110737-2110847:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2106933-2107990:-1:exon

alad
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: alad
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2173550..2201063)
location: region:2173550-2201063:-1
so has part: feature:2173550-2201063:-1:exon
subclass of: SO_0000010

125465372
type: Gene
SIO_000068: ncbigene

position:2173550:-1
position: 2173550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2201063:-1
position: 2201063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2173550-2201063:-1:exon

alad
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: alad
product: aminolevulinate dehydratase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_048558795.1
SIO_010081: alad
subclass of: SO_0000673
so part of: alad
location: complement(join(2173550..2174236,2175319..2175448,2176875..2176961,2180338..2180425,2180845..2180900,2181500..2181588,2183578..2183661,2184708..2184843,2186877..2186973,2194493..2194543,2194750..2194893,2200386..2200546))
location: region:2173550-2200546:-1
so has part: feature:2200386-2200546:-1:exon
so has part: feature:2194750-2194893:-1:exon
so has part: feature:2194493-2194543:-1:exon
so has part: feature:2186877-2186973:-1:exon
so has part: feature:2184708-2184843:-1:exon
so has part: feature:2183578-2183661:-1:exon
so has part: feature:2181500-2181588:-1:exon
so has part: feature:2180845-2180900:-1:exon
so has part: feature:2180338-2180425:-1:exon
so has part: feature:2176875-2176961:-1:exon
so has part: feature:2175319-2175448:-1:exon
so has part: feature:2173550-2174236:-1:exon

position:2200546:-1
position: 2200546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2200386-2200546:-1:exon

position:2200386:-1
position: 2200386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2194750-2194893:-1:exon

position:2194750:-1
position: 2194750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2194893:-1
position: 2194893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2194493-2194543:-1:exon

position:2194493:-1
position: 2194493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2194543:-1
position: 2194543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2186877-2186973:-1:exon

position:2186877:-1
position: 2186877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2186973:-1
position: 2186973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2184708-2184843:-1:exon

position:2184708:-1
position: 2184708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2184843:-1
position: 2184843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2183578-2183661:-1:exon

position:2183578:-1
position: 2183578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2183661:-1
position: 2183661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2181500-2181588:-1:exon

position:2181500:-1
position: 2181500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2181588:-1
position: 2181588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2180845-2180900:-1:exon

position:2180845:-1
position: 2180845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2180900:-1
position: 2180900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2180338-2180425:-1:exon

position:2180338:-1
position: 2180338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2180425:-1
position: 2180425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2176875-2176961:-1:exon

position:2176875:-1
position: 2176875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2176961:-1
position: 2176961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2175319-2175448:-1:exon

position:2175319:-1
position: 2175319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2175448:-1
position: 2175448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2173550-2174236:-1:exon

position:2174236:-1
position: 2174236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

alad
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: alad
product: aminolevulinate dehydratase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_048558796.1
SIO_010081: alad
subclass of: SO_0000673
so part of: alad
location: complement(join(2173550..2174236,2175319..2175448,2176875..2176961,2180338..2180425,2180845..2180900,2181500..2181588,2183578..2183661,2184708..2184843,2186877..2186973,2194493..2194543,2194750..2194893,2199509..2200260))
location: region:2173550-2200260:-1
so has part: feature:2199509-2200260:-1:exon
so has part: feature:2194750-2194893:-1:exon
so has part: feature:2194493-2194543:-1:exon
so has part: feature:2186877-2186973:-1:exon
so has part: feature:2184708-2184843:-1:exon
so has part: feature:2183578-2183661:-1:exon
so has part: feature:2181500-2181588:-1:exon
so has part: feature:2180845-2180900:-1:exon
so has part: feature:2180338-2180425:-1:exon
so has part: feature:2176875-2176961:-1:exon
so has part: feature:2175319-2175448:-1:exon
so has part: feature:2173550-2174236:-1:exon

position:2200260:-1
position: 2200260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2199509-2200260:-1:exon

position:2199509:-1
position: 2199509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2194750-2194893:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2194493-2194543:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2186877-2186973:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2184708-2184843:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2183578-2183661:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2181500-2181588:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2180845-2180900:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2180338-2180425:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2176875-2176961:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2175319-2175448:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2173550-2174236:-1:exon

alad
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: alad
product: aminolevulinate dehydratase, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_048558797.1
SIO_010081: alad
subclass of: SO_0000673
so part of: alad
location: complement(join(2173550..2174236,2175319..2175448,2176875..2176961,2180338..2180425,2180845..2180900,2181500..2181588,2183578..2183661,2184708..2184843,2186877..2186973,2194493..2194543,2194750..2194893,2196885..2196905))
location: region:2173550-2196905:-1
so has part: feature:2196885-2196905:-1:exon
so has part: feature:2194750-2194893:-1:exon
so has part: feature:2194493-2194543:-1:exon
so has part: feature:2186877-2186973:-1:exon
so has part: feature:2184708-2184843:-1:exon
so has part: feature:2183578-2183661:-1:exon
so has part: feature:2181500-2181588:-1:exon
so has part: feature:2180845-2180900:-1:exon
so has part: feature:2180338-2180425:-1:exon
so has part: feature:2176875-2176961:-1:exon
so has part: feature:2175319-2175448:-1:exon
so has part: feature:2173550-2174236:-1:exon

position:2196905:-1
position: 2196905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2196885-2196905:-1:exon

position:2196885:-1
position: 2196885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2194750-2194893:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2194493-2194543:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2186877-2186973:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2184708-2184843:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2183578-2183661:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2181500-2181588:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2180845-2180900:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2180338-2180425:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2176875-2176961:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2175319-2175448:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2173550-2174236:-1:exon

alad
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: alad
product: aminolevulinate dehydratase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_048558794.1
SIO_010081: alad
subclass of: SO_0000673
so part of: alad
location: complement(join(2173551..2174236,2175319..2175448,2176875..2176961,2180338..2180425,2180845..2180900,2181500..2181588,2183578..2183661,2184708..2184843,2186877..2186973,2194493..2194543,2194750..2194893,2200947..2201063))
location: region:2173551-2201063:-1
so has part: feature:2200947-2201063:-1:exon
so has part: feature:2194750-2194893:-1:exon
so has part: feature:2194493-2194543:-1:exon
so has part: feature:2186877-2186973:-1:exon
so has part: feature:2184708-2184843:-1:exon
so has part: feature:2183578-2183661:-1:exon
so has part: feature:2181500-2181588:-1:exon
so has part: feature:2180845-2180900:-1:exon
so has part: feature:2180338-2180425:-1:exon
so has part: feature:2176875-2176961:-1:exon
so has part: feature:2175319-2175448:-1:exon
so has part: feature:2173551-2174236:-1:exon

position:2173551:-1
position: 2173551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2200947-2201063:-1:exon

position:2200947:-1
position: 2200947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2194750-2194893:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2194493-2194543:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2186877-2186973:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2184708-2184843:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2183578-2183661:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2181500-2181588:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2180845-2180900:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2180338-2180425:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2176875-2176961:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2175319-2175448:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2173551-2174236:-1:exon

alad
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: alad
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: delta-aminolevulinic acid dehydratase
translation: MQTESLLHSGYSHPLLRAWQTCTATFNASNLIYPIFVTDDANADEPIASLPGQARYGVNKLEEKLRPLLNDGLGCVLIFGVPTKIAKDERGSGADLEDTPVILAIKKLRKMFPTLVIACDVCLCPYTSHGHCGILRKDETLNNEASCQRLAEVALAYAKAGCHIVAPSDMMDGRVGTIKQALIANELGNKVALMSYSAKFASCFYGPFRDAAQSKPAFGDRRCYQLPPGARGLAIRAVDRDVREGADMLMVKPGMPYLDIVREVKNKHPSYPLAIYHVSGEFAMLWHGSQAGAFDLRTAVMEALTSFRRAGADIIITYYVPQILKWLKDI
SIO_010081: alad
subclass of: SO_0000673
so part of: alad
location: complement(join(2174175..2174236,2175319..2175448,2176875..2176961,2180338..2180425,2180845..2180900,2181500..2181588,2183578..2183661,2184708..2184843,2186877..2186973,2194493..2194543,2194750..2194862))
location: region:2174175-2194862:-1
so has part: feature:2194750-2194862:-1:exon
so has part: feature:2194493-2194543:-1:exon
so has part: feature:2186877-2186973:-1:exon
so has part: feature:2184708-2184843:-1:exon
so has part: feature:2183578-2183661:-1:exon
so has part: feature:2181500-2181588:-1:exon
so has part: feature:2180845-2180900:-1:exon
so has part: feature:2180338-2180425:-1:exon
so has part: feature:2176875-2176961:-1:exon
so has part: feature:2175319-2175448:-1:exon
so has part: feature:2174175-2174236:-1:exon

XP_048414751.1
type: Protein
SIO_000068: ncbiprotein

position:2174175:-1
position: 2174175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2194862:-1
position: 2194862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2194750-2194862:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2194493-2194543:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2186877-2186973:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2184708-2184843:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2183578-2183661:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2181500-2181588:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2180845-2180900:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2180338-2180425:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2176875-2176961:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2175319-2175448:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2174175-2174236:-1:exon

alad
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: alad
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: delta-aminolevulinic acid dehydratase
translation: MQTESLLHSGYSHPLLRAWQTCTATFNASNLIYPIFVTDDANADEPIASLPGQARYGVNKLEEKLRPLLNDGLGCVLIFGVPTKIAKDERGSGADLEDTPVILAIKKLRKMFPTLVIACDVCLCPYTSHGHCGILRKDETLNNEASCQRLAEVALAYAKAGCHIVAPSDMMDGRVGTIKQALIANELGNKVALMSYSAKFASCFYGPFRDAAQSKPAFGDRRCYQLPPGARGLAIRAVDRDVREGADMLMVKPGMPYLDIVREVKNKHPSYPLAIYHVSGEFAMLWHGSQAGAFDLRTAVMEALTSFRRAGADIIITYYVPQILKWLKDI
SIO_010081: alad
subclass of: SO_0000673
so part of: alad
location: complement(join(2174175..2174236,2175319..2175448,2176875..2176961,2180338..2180425,2180845..2180900,2181500..2181588,2183578..2183661,2184708..2184843,2186877..2186973,2194493..2194543,2194750..2194862))
location: region:2174175-2194862:-1
so has part: feature:2194750-2194862:-1:exon
so has part: feature:2194493-2194543:-1:exon
so has part: feature:2186877-2186973:-1:exon
so has part: feature:2184708-2184843:-1:exon
so has part: feature:2183578-2183661:-1:exon
so has part: feature:2181500-2181588:-1:exon
so has part: feature:2180845-2180900:-1:exon
so has part: feature:2180338-2180425:-1:exon
so has part: feature:2176875-2176961:-1:exon
so has part: feature:2175319-2175448:-1:exon
so has part: feature:2174175-2174236:-1:exon

XP_048414752.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2194750-2194862:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2194493-2194543:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2186877-2186973:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2184708-2184843:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2183578-2183661:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2181500-2181588:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2180845-2180900:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2180338-2180425:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2176875-2176961:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2175319-2175448:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2174175-2174236:-1:exon

alad
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: alad
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: delta-aminolevulinic acid dehydratase
translation: MQTESLLHSGYSHPLLRAWQTCTATFNASNLIYPIFVTDDANADEPIASLPGQARYGVNKLEEKLRPLLNDGLGCVLIFGVPTKIAKDERGSGADLEDTPVILAIKKLRKMFPTLVIACDVCLCPYTSHGHCGILRKDETLNNEASCQRLAEVALAYAKAGCHIVAPSDMMDGRVGTIKQALIANELGNKVALMSYSAKFASCFYGPFRDAAQSKPAFGDRRCYQLPPGARGLAIRAVDRDVREGADMLMVKPGMPYLDIVREVKNKHPSYPLAIYHVSGEFAMLWHGSQAGAFDLRTAVMEALTSFRRAGADIIITYYVPQILKWLKDI
SIO_010081: alad
subclass of: SO_0000673
so part of: alad
location: complement(join(2174175..2174236,2175319..2175448,2176875..2176961,2180338..2180425,2180845..2180900,2181500..2181588,2183578..2183661,2184708..2184843,2186877..2186973,2194493..2194543,2194750..2194862))
location: region:2174175-2194862:-1
so has part: feature:2194750-2194862:-1:exon
so has part: feature:2194493-2194543:-1:exon
so has part: feature:2186877-2186973:-1:exon
so has part: feature:2184708-2184843:-1:exon
so has part: feature:2183578-2183661:-1:exon
so has part: feature:2181500-2181588:-1:exon
so has part: feature:2180845-2180900:-1:exon
so has part: feature:2180338-2180425:-1:exon
so has part: feature:2176875-2176961:-1:exon
so has part: feature:2175319-2175448:-1:exon
so has part: feature:2174175-2174236:-1:exon

XP_048414753.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2194750-2194862:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2194493-2194543:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2186877-2186973:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2184708-2184843:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2183578-2183661:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2181500-2181588:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2180845-2180900:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2180338-2180425:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2176875-2176961:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2175319-2175448:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2174175-2174236:-1:exon

alad
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: alad
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: delta-aminolevulinic acid dehydratase
translation: MQTESLLHSGYSHPLLRAWQTCTATFNASNLIYPIFVTDDANADEPIASLPGQARYGVNKLEEKLRPLLNDGLGCVLIFGVPTKIAKDERGSGADLEDTPVILAIKKLRKMFPTLVIACDVCLCPYTSHGHCGILRKDETLNNEASCQRLAEVALAYAKAGCHIVAPSDMMDGRVGTIKQALIANELGNKVALMSYSAKFASCFYGPFRDAAQSKPAFGDRRCYQLPPGARGLAIRAVDRDVREGADMLMVKPGMPYLDIVREVKNKHPSYPLAIYHVSGEFAMLWHGSQAGAFDLRTAVMEALTSFRRAGADIIITYYVPQILKWLKDI
SIO_010081: alad
subclass of: SO_0000673
so part of: alad
location: complement(join(2174175..2174236,2175319..2175448,2176875..2176961,2180338..2180425,2180845..2180900,2181500..2181588,2183578..2183661,2184708..2184843,2186877..2186973,2194493..2194543,2194750..2194862))
location: region:2174175-2194862:-1
so has part: feature:2194750-2194862:-1:exon
so has part: feature:2194493-2194543:-1:exon
so has part: feature:2186877-2186973:-1:exon
so has part: feature:2184708-2184843:-1:exon
so has part: feature:2183578-2183661:-1:exon
so has part: feature:2181500-2181588:-1:exon
so has part: feature:2180845-2180900:-1:exon
so has part: feature:2180338-2180425:-1:exon
so has part: feature:2176875-2176961:-1:exon
so has part: feature:2175319-2175448:-1:exon
so has part: feature:2174175-2174236:-1:exon

XP_048414754.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2194750-2194862:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2194493-2194543:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2186877-2186973:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2184708-2184843:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2183578-2183661:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2181500-2181588:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2180845-2180900:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2180338-2180425:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2176875-2176961:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2175319-2175448:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2174175-2174236:-1:exon

ndor1
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: ndor1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2213722..2274839)
location: region:2213722-2274839:-1
so has part: feature:2213722-2274839:-1:exon
subclass of: SO_0000010

125465480
type: Gene
SIO_000068: ncbigene

position:2213722:-1
position: 2213722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2274839:-1
position: 2274839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2213722-2274839:-1:exon

ndor1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: ndor1
product: NADPH dependent diflavin oxidoreductase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_048559069.1
SIO_010081: ndor1
subclass of: SO_0000673
so part of: ndor1
location: complement(join(2213722..2215174,2224373..2224467,2225658..2225776,2227234..2227380,2228627..2228741,2230282..2230389,2231652..2231872,2235495..2235616,2240464..2240673,2241482..2241583,2245436..2245534,2250485..2250582,2256284..2256361,2258101..2258235,2258540..2258603,2274766..2274839))
location: region:2213722-2274839:-1
so has part: feature:2274766-2274839:-1:exon
so has part: feature:2258540-2258603:-1:exon
so has part: feature:2258101-2258235:-1:exon
so has part: feature:2256284-2256361:-1:exon
so has part: feature:2250485-2250582:-1:exon
so has part: feature:2245436-2245534:-1:exon
so has part: feature:2241482-2241583:-1:exon
so has part: feature:2240464-2240673:-1:exon
so has part: feature:2235495-2235616:-1:exon
so has part: feature:2231652-2231872:-1:exon
so has part: feature:2230282-2230389:-1:exon
so has part: feature:2228627-2228741:-1:exon
so has part: feature:2227234-2227380:-1:exon
so has part: feature:2225658-2225776:-1:exon
so has part: feature:2224373-2224467:-1:exon
so has part: feature:2213722-2215174:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2274766-2274839:-1:exon

position:2274766:-1
position: 2274766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2258540-2258603:-1:exon

position:2258540:-1
position: 2258540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2258603:-1
position: 2258603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2258101-2258235:-1:exon

position:2258101:-1
position: 2258101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2258235:-1
position: 2258235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2256284-2256361:-1:exon

position:2256284:-1
position: 2256284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2256361:-1
position: 2256361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2250485-2250582:-1:exon

position:2250485:-1
position: 2250485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2250582:-1
position: 2250582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2245436-2245534:-1:exon

position:2245436:-1
position: 2245436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2245534:-1
position: 2245534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2241482-2241583:-1:exon

position:2241482:-1
position: 2241482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2241583:-1
position: 2241583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2240464-2240673:-1:exon

position:2240464:-1
position: 2240464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2240673:-1
position: 2240673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2235495-2235616:-1:exon

position:2235495:-1
position: 2235495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2235616:-1
position: 2235616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2231652-2231872:-1:exon

position:2231652:-1
position: 2231652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2231872:-1
position: 2231872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2230282-2230389:-1:exon

position:2230282:-1
position: 2230282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2230389:-1
position: 2230389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2228627-2228741:-1:exon

position:2228627:-1
position: 2228627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2228741:-1
position: 2228741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2227234-2227380:-1:exon

position:2227234:-1
position: 2227234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2227380:-1
position: 2227380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2225658-2225776:-1:exon

position:2225658:-1
position: 2225658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2225776:-1
position: 2225776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2224373-2224467:-1:exon

position:2224373:-1
position: 2224373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2224467:-1
position: 2224467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2213722-2215174:-1:exon

position:2215174:-1
position: 2215174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ndor1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: ndor1
product: NADPH dependent diflavin oxidoreductase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_048559070.1
SIO_010081: ndor1
subclass of: SO_0000673
so part of: ndor1
location: complement(join(2213722..2215174,2224373..2224467,2225658..2225776,2227234..2227380,2228627..2228741,2230282..2230389,2231652..2231872,2235495..2235616,2240464..2240673,2241482..2241583,2245436..2245534,2250485..2250582,2256284..2256361,2258101..2258235,2258540..2258603,2258715..2259450))
location: region:2213722-2259450:-1
so has part: feature:2258715-2259450:-1:exon
so has part: feature:2258540-2258603:-1:exon
so has part: feature:2258101-2258235:-1:exon
so has part: feature:2256284-2256361:-1:exon
so has part: feature:2250485-2250582:-1:exon
so has part: feature:2245436-2245534:-1:exon
so has part: feature:2241482-2241583:-1:exon
so has part: feature:2240464-2240673:-1:exon
so has part: feature:2235495-2235616:-1:exon
so has part: feature:2231652-2231872:-1:exon
so has part: feature:2230282-2230389:-1:exon
so has part: feature:2228627-2228741:-1:exon
so has part: feature:2227234-2227380:-1:exon
so has part: feature:2225658-2225776:-1:exon
so has part: feature:2224373-2224467:-1:exon
so has part: feature:2213722-2215174:-1:exon

position:2259450:-1
position: 2259450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2258715-2259450:-1:exon

position:2258715:-1
position: 2258715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2258540-2258603:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2258101-2258235:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2256284-2256361:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2250485-2250582:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2245436-2245534:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2241482-2241583:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2240464-2240673:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2235495-2235616:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2231652-2231872:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2230282-2230389:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2228627-2228741:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2227234-2227380:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2225658-2225776:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2224373-2224467:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2213722-2215174:-1:exon

ndor1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: ndor1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NADPH-dependent diflavin oxidoreductase 1
translation: MVDRKLLVLFGSQTGTAQDVAERIGREGVRRHFKCRVMPLDSYTIADLIQEPLVVFVCSTTGQGEPPDNMKKFWRFIFRRNLPANSLSLMDCAVLGLGDSSYPKFNFVAKKLSKRLIQLGSNGLLPVGLGDDQHDLGPDAVIDPWLKQFWEQALNLYPLPPGLTVLGDDVILPSKYSFQFEDDATSGVSVEPYDKNAQDKYPPSQLHPFPAQMISNERVTDEKHFQDVRLITFDITGSSIEYSAGDVAMIEPRNSLDSVEQFCQLLRLDPCKKFLLKPNDSAIPLPARLPQPCTVKFLVERYLDINCVPRRSFFDLLSYFSPDEMEREKLKEFSSAEGQDELYSYCNRLRRTTLEILYDFPHTTSAIPADYLFDLIPEIRPRAFSIASSQLAYPSQIQILMAVVRYRTKLKKPRCGLCSSWLGSQNPQHSAVYVPLWVKKGVLQFPTDTNTPVIMVGPGTGVAPFRAVIQERVVERKRGNYLFFGCRGKSKDFFCQAEWEELNQKGLLTLFTAFSRDQEDKIYVQHRIKENGSLIWKLIQNEQAYFYIAGNAKMMPTQVTDSLQSVFQSEGGLSEPESEQLLMELERCGRFQTETWS
SIO_010081: ndor1
subclass of: SO_0000673
so part of: ndor1
location: complement(join(2215030..2215174,2224373..2224467,2225658..2225776,2227234..2227380,2228627..2228741,2230282..2230389,2231652..2231872,2235495..2235616,2240464..2240673,2241482..2241583,2245436..2245534,2250485..2250582,2256284..2256361,2258101..2258235))
location: region:2215030-2258235:-1
so has part: feature:2258101-2258235:-1:exon
so has part: feature:2256284-2256361:-1:exon
so has part: feature:2250485-2250582:-1:exon
so has part: feature:2245436-2245534:-1:exon
so has part: feature:2241482-2241583:-1:exon
so has part: feature:2240464-2240673:-1:exon
so has part: feature:2235495-2235616:-1:exon
so has part: feature:2231652-2231872:-1:exon
so has part: feature:2230282-2230389:-1:exon
so has part: feature:2228627-2228741:-1:exon
so has part: feature:2227234-2227380:-1:exon
so has part: feature:2225658-2225776:-1:exon
so has part: feature:2224373-2224467:-1:exon
so has part: feature:2215030-2215174:-1:exon

XP_048415026.1
type: Protein
SIO_000068: ncbiprotein

position:2215030:-1
position: 2215030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2258101-2258235:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2256284-2256361:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2250485-2250582:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2245436-2245534:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2241482-2241583:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2240464-2240673:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2235495-2235616:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2231652-2231872:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2230282-2230389:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2228627-2228741:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2227234-2227380:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2225658-2225776:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2224373-2224467:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2215030-2215174:-1:exon

ndor1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: ndor1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NADPH-dependent diflavin oxidoreductase 1
translation: MVDRKLLVLFGSQTGTAQDVAERIGREGVRRHFKCRVMPLDSYTIADLIQEPLVVFVCSTTGQGEPPDNMKKFWRFIFRRNLPANSLSLMDCAVLGLGDSSYPKFNFVAKKLSKRLIQLGSNGLLPVGLGDDQHDLGPDAVIDPWLKQFWEQALNLYPLPPGLTVLGDDVILPSKYSFQFEDDATSGVSVEPYDKNAQDKYPPSQLHPFPAQMISNERVTDEKHFQDVRLITFDITGSSIEYSAGDVAMIEPRNSLDSVEQFCQLLRLDPCKKFLLKPNDSAIPLPARLPQPCTVKFLVERYLDINCVPRRSFFDLLSYFSPDEMEREKLKEFSSAEGQDELYSYCNRLRRTTLEILYDFPHTTSAIPADYLFDLIPEIRPRAFSIASSQLAYPSQIQILMAVVRYRTKLKKPRCGLCSSWLGSQNPQHSAVYVPLWVKKGVLQFPTDTNTPVIMVGPGTGVAPFRAVIQERVVERKRGNYLFFGCRGKSKDFFCQAEWEELNQKGLLTLFTAFSRDQEDKIYVQHRIKENGSLIWKLIQNEQAYFYIAGNAKMMPTQVTDSLQSVFQSEGGLSEPESEQLLMELERCGRFQTETWS
SIO_010081: ndor1
subclass of: SO_0000673
so part of: ndor1
location: complement(join(2215030..2215174,2224373..2224467,2225658..2225776,2227234..2227380,2228627..2228741,2230282..2230389,2231652..2231872,2235495..2235616,2240464..2240673,2241482..2241583,2245436..2245534,2250485..2250582,2256284..2256361,2258101..2258235))
location: region:2215030-2258235:-1
so has part: feature:2258101-2258235:-1:exon
so has part: feature:2256284-2256361:-1:exon
so has part: feature:2250485-2250582:-1:exon
so has part: feature:2245436-2245534:-1:exon
so has part: feature:2241482-2241583:-1:exon
so has part: feature:2240464-2240673:-1:exon
so has part: feature:2235495-2235616:-1:exon
so has part: feature:2231652-2231872:-1:exon
so has part: feature:2230282-2230389:-1:exon
so has part: feature:2228627-2228741:-1:exon
so has part: feature:2227234-2227380:-1:exon
so has part: feature:2225658-2225776:-1:exon
so has part: feature:2224373-2224467:-1:exon
so has part: feature:2215030-2215174:-1:exon

XP_048415027.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2258101-2258235:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2256284-2256361:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2250485-2250582:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2245436-2245534:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2241482-2241583:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2240464-2240673:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2235495-2235616:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2231652-2231872:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2230282-2230389:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2228627-2228741:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2227234-2227380:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2225658-2225776:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2224373-2224467:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2215030-2215174:-1:exon

tmem203
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: tmem203
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2274727..2278650
location: region:2274727-2278650:1
so has part: feature:2274727-2278650:1:exon
subclass of: SO_0000010

125465482
type: Gene
SIO_000068: ncbigene

position:2274727:1
position: 2274727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2278650:1
position: 2278650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2274727-2278650:1:exon

tmem203
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: tmem203
product: transmembrane protein 203
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048559071.1
SIO_010081: tmem203
subclass of: SO_0000673
so part of: tmem203
location: join(2274727..2274893,2277085..2278650)
location: region:2274727-2278650:1
so has part: feature:2274727-2274893:1:exon
so has part: feature:2277085-2278650:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2274727-2274893:1:exon

position:2274893:1
position: 2274893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2277085-2278650:1:exon

position:2277085:1
position: 2277085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tmem203
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: tmem203
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 203
translation: MLFSLRELVQWLGFATFEMLLHLVAFLVFSVLLALKVDNFAKLDWWYVFIPLFTADGLSTYFTVIVSIRLFQDGEKRLAVMRLFWILTVLSLKFVFEMLLCQKLEGQSSQLWYGLIMSPIFILLQLLMIRACRVN
SIO_010081: tmem203
subclass of: SO_0000673
so part of: tmem203
location: 2277218..2277625
location: region:2277218-2277625:1
so has part: feature:2277218-2277625:1:exon

XP_048415028.1
type: Protein
SIO_000068: ncbiprotein

position:2277218:1
position: 2277218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2277625:1
position: 2277625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2277218-2277625:1:exon

tprn
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: tprn
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2319881..2400604
location: region:2319881-2400604:1
so has part: feature:2319881-2400604:1:exon
subclass of: SO_0000010

125465526
type: Gene
SIO_000068: ncbigene

position:2319881:1
position: 2319881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2400604:1
position: 2400604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2319881-2400604:1:exon

tprn
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: tprn
product: taperin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_048559149.1
SIO_010081: tprn
subclass of: SO_0000673
so part of: tprn
location: join(2319881..2322430,2388471..2388672,2391785..2391912,2397162..2400604)
location: region:2319881-2400604:1
so has part: feature:2319881-2322430:1:exon
so has part: feature:2388471-2388672:1:exon
so has part: feature:2391785-2391912:1:exon
so has part: feature:2397162-2400604:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2319881-2322430:1:exon

position:2322430:1
position: 2322430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2388471-2388672:1:exon

position:2388471:1
position: 2388471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2388672:1
position: 2388672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2391785-2391912:1:exon

position:2391785:1
position: 2391785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2391912:1
position: 2391912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2397162-2400604:1:exon

position:2397162:1
position: 2397162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tprn
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: tprn
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: taperin
translation: MSVSEQRPASPLLTPLQEEEAAAAGLSTRMPAWKKEILERRKAKLANPAADGRTWLPSRAASHSNQAEQDPSPEAADGGSGSEAGGSVLLENIAPVQENPFIQRERRRRRRLQAESEPSGAGGAGGPGQGQGQDPAKPLQQLLELYSHMPGVRTIQADNIIIIESDPSYFSEPGSPSRTQPQPQPQDVEQLLSRAGHGSVAEIRAAEVLVYDGTLSRSEENLSSLGSGDAGPPGGLHGKVSRLLEKFDRNYVKPSRSRSTENLLDGFSPDRDRRRKPLLLPKPPSVRQLGQGATSPGPKRIRSPGPHLSPPPQPISFPLSSPTRYSGPPSPVRTPSVPSVSSYNQGDAKPAVSDRTEPGGRPFSVSSYRKHFESGPANGQLGPKESTPSHTPARQNGENISKLRVIKNNVTENGLRDLDLMGNNSFSVNGGEMDRKDQKDASNPGSGWMPSSVSAASNEGSNVCAFDQKKASKCSPERSQPAVAPKSLPAKSSATPSGKMNQDHKIAGSAKVTPNQCNGVSASTSMNDSFKIIPATPPDVSCIPEDDIQARALANLKKQSKNSFVVIPKKRVSVSVSSSDVCDSREANNASCEKPKVEISTSNSEAQTDRVSAVSLDRINLSDHEQSTEGKLPFREPSLPKADLEPKEEEVMNKSTSCGTYEVSSKHINAQVSVEKERPGLLPTPMSEAEQKAESTVTLIKMTARNDTDLPVTNIDDILGTGEKETPKQPSKAKSPGAKEQLPEESVGGLHHPFVQRKSGNTFTIVPQRKPANRAQQPSVDTNEVSQANGTHEQTVEDPEPSLAKLGVLLKKRYPLAEEIQVIGGYLSLERSCLSKAGSTRKKMKISFNDSSLHTTFEYPSENSLIQEEESGDSDNDEEEQSSTFFFPRPSYTSSPTSPSSPLRTNTIVSAFTNYTPKHAMSFNTWQEQKLDESVSGRNSCLHSTESSTEDDMLTPADGSSHSDYSSEPALYF
SIO_010081: tprn
subclass of: SO_0000673
so part of: tprn
location: join(2319902..2322430,2388471..2388672,2391785..2391912,2397162..2397224)
location: region:2319902-2397224:1
so has part: feature:2319902-2322430:1:exon
so has part: feature:2388471-2388672:1:exon
so has part: feature:2391785-2391912:1:exon
so has part: feature:2397162-2397224:1:exon

XP_048415106.1
type: Protein
SIO_000068: ncbiprotein

position:2319902:1
position: 2319902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2397224:1
position: 2397224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2319902-2322430:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2388471-2388672:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2391785-2391912:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2397162-2397224:1:exon

ssna1
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: ssna1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2402366..2410097)
location: region:2402366-2410097:-1
so has part: feature:2402366-2410097:-1:exon
subclass of: SO_0000010

125465510
type: Gene
SIO_000068: ncbigene

position:2402366:-1
position: 2402366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2410097:-1
position: 2410097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2402366-2410097:-1:exon

ssna1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: ssna1
product: Sjogren syndrome nuclear autoantigen 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048559122.1
SIO_010081: ssna1
subclass of: SO_0000673
so part of: ssna1
location: complement(join(2402366..2402838,2408040..2408239,2409985..2410097))
location: region:2402366-2410097:-1
so has part: feature:2409985-2410097:-1:exon
so has part: feature:2408040-2408239:-1:exon
so has part: feature:2402366-2402838:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2409985-2410097:-1:exon

position:2409985:-1
position: 2409985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2408040-2408239:-1:exon

position:2408040:-1
position: 2408040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2408239:-1
position: 2408239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2402366-2402838:-1:exon

position:2402838:-1
position: 2402838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ssna1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: ssna1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Sjoegren syndrome nuclear autoantigen 1
translation: MSQQGAALQSYNNELVKCIEDLCTKREELNQQILQEEEEKNKLQNDIRILTEKLAKVNESLARKMATRNEFDRTIAETEAAYMKILESSQTLLTVLKREAGTLNQVHESSDTKDS
SIO_010081: ssna1
subclass of: SO_0000673
so part of: ssna1
location: complement(join(2402743..2402838,2408040..2408239,2409985..2410036))
location: region:2402743-2410036:-1
so has part: feature:2409985-2410036:-1:exon
so has part: feature:2408040-2408239:-1:exon
so has part: feature:2402743-2402838:-1:exon

XP_048415079.1
type: Protein
SIO_000068: ncbiprotein

position:2402743:-1
position: 2402743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2410036:-1
position: 2410036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2409985-2410036:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2408040-2408239:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2402743-2402838:-1:exon

anapc2
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: anapc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2410364..2468387
location: region:2410364-2468387:1
so has part: feature:2410364-2468387:1:exon
subclass of: SO_0000010

125465566
type: Gene
SIO_000068: ncbigene

position:2410364:1
position: 2410364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2468387:1
position: 2468387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2410364-2468387:1:exon

anapc2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: anapc2
product: anaphase promoting complex subunit 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_048559243.1
SIO_010081: anapc2
subclass of: SO_0000673
so part of: anapc2
location: join(2410364..2410477,2411371..2411969,2434729..2434861,2437202..2437379,2438088..2438207,2444839..2444956,2448219..2448400,2449827..2449968,2451336..2451411,2453885..2454070,2455181..2455310,2460024..2460259,2460929..2461163,2464173..2468387)
location: region:2410364-2468387:1
so has part: feature:2410364-2410477:1:exon
so has part: feature:2411371-2411969:1:exon
so has part: feature:2434729-2434861:1:exon
so has part: feature:2437202-2437379:1:exon
so has part: feature:2438088-2438207:1:exon
so has part: feature:2444839-2444956:1:exon
so has part: feature:2448219-2448400:1:exon
so has part: feature:2449827-2449968:1:exon
so has part: feature:2451336-2451411:1:exon
so has part: feature:2453885-2454070:1:exon
so has part: feature:2455181-2455310:1:exon
so has part: feature:2460024-2460259:1:exon
so has part: feature:2460929-2461163:1:exon
so has part: feature:2464173-2468387:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2410364-2410477:1:exon

position:2410477:1
position: 2410477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2411371-2411969:1:exon

position:2411371:1
position: 2411371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2411969:1
position: 2411969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2434729-2434861:1:exon

position:2434729:1
position: 2434729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2434861:1
position: 2434861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2437202-2437379:1:exon

position:2437202:1
position: 2437202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2437379:1
position: 2437379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2438088-2438207:1:exon

position:2438088:1
position: 2438088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2438207:1
position: 2438207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2444839-2444956:1:exon

position:2444839:1
position: 2444839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2444956:1
position: 2444956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2448219-2448400:1:exon

position:2448219:1
position: 2448219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2448400:1
position: 2448400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2449827-2449968:1:exon

position:2449827:1
position: 2449827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2449968:1
position: 2449968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2451336-2451411:1:exon

position:2451336:1
position: 2451336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2451411:1
position: 2451411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2453885-2454070:1:exon

position:2453885:1
position: 2453885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2454070:1
position: 2454070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2455181-2455310:1:exon

position:2455181:1
position: 2455181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2455310:1
position: 2455310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2460024-2460259:1:exon

position:2460024:1
position: 2460024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2460259:1
position: 2460259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2460929-2461163:1:exon

position:2460929:1
position: 2460929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2461163:1
position: 2461163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2464173-2468387:1:exon

position:2464173:1
position: 2464173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

anapc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: anapc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: anaphase-promoting complex subunit 2
translation: MAALEASSSCGLSLSSAWSRLSSGLVPLSALGLETSRLVSGSELEDDLHAALETLRQYGLQSVALEWFMEMLQVDLQKNIAAEFWDFLTQRENMVTEQQRSKLLYDAFCMLDQRLTPYLCSLKYLETWIEAGLITSVGPGTLKDKVYTMVKAVLFFSTVQPFQEIIHEFYTRAFSIYVHQDKTLQNGDSMSEDEDENAADDMEQLSCAGCNAVKEQCWCTTAVEQFAKVNHVLHSLNLLERISANAITTILHKMIEEHVGRLCRGEYENSFLSQLEEWLESKVVCWLSMVFLQKTNTKSSSPQTSSTLQRWRIHLQFFLYQVYANMRIEELFSIIRDFPESKAALQDLKVCLERTNQRQQLLSSLKAALETRLLHPGVNTADVITLYISAIKALRELDPSMVILEVVCEPVRKYLRTRDDTVRQIVAGLTDDSEGSSDLANELSKADPITLEHGHDSDDDMSDPDDWLPDPVDADPGKFGSKRRSSDIITLLVSIYGSKELFINEYRTLLADRILHHFSYITCREIRNLELLKLRFGEAQMHFCEVMLKDVADSRRINSHIHEEDQETPLHLNAMILSGEFWPPLKEEKLELPAEVKEAMDAYTKKYEKLKAMRSLNWKPHLGNVDLEIELADRTLSVSVSPVHAAIIMHFQQKSTWTLDELSDALKVPVVALRRKIALWQQQGVLKEDPTDTFTVIEEEQKDQQEKMVLIDSDEEGDSAMASQADQKEEELQLFWTYIQGMLTNLESLPLERIHTMLKMFVMTGPVMAEIDMQELQAFLQKKVKDHQLVYSGGVYRLPKSNC
SIO_010081: anapc2
subclass of: SO_0000673
so part of: anapc2
location: join(2410379..2410477,2411371..2411969,2434729..2434861,2437202..2437379,2438088..2438207,2444839..2444956,2448219..2448400,2449827..2449968,2451336..2451411,2453885..2454070,2455181..2455310,2460024..2460259,2460929..2461141)
location: region:2410379-2461141:1
so has part: feature:2410379-2410477:1:exon
so has part: feature:2411371-2411969:1:exon
so has part: feature:2434729-2434861:1:exon
so has part: feature:2437202-2437379:1:exon
so has part: feature:2438088-2438207:1:exon
so has part: feature:2444839-2444956:1:exon
so has part: feature:2448219-2448400:1:exon
so has part: feature:2449827-2449968:1:exon
so has part: feature:2451336-2451411:1:exon
so has part: feature:2453885-2454070:1:exon
so has part: feature:2455181-2455310:1:exon
so has part: feature:2460024-2460259:1:exon
so has part: feature:2460929-2461141:1:exon

XP_048415200.1
type: Protein
SIO_000068: ncbiprotein

position:2410379:1
position: 2410379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2461141:1
position: 2461141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2410379-2410477:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2411371-2411969:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2434729-2434861:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2437202-2437379:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2438088-2438207:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2444839-2444956:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2448219-2448400:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2449827-2449968:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2451336-2451411:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2453885-2454070:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2455181-2455310:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2460024-2460259:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2460929-2461141:1:exon

LOC125465301
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125465301
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2566991..2575320)
location: region:2566991-2575320:-1
so has part: feature:2566991-2575320:-1:exon
subclass of: SO_0000011

125465301
type: Gene
SIO_000068: ncbigene

position:2566991:-1
position: 2566991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2575320:-1
position: 2575320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2566991-2575320:-1:exon

LOC125465301
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 378071
nc RNA class: lncRNA
gene: LOC125465301
product: uncharacterized LOC125465301
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_007250221.1
SIO_010081: LOC125465301
subclass of: SO_0000673
so part of: LOC125465301
location: complement(join(2566991..2567055,2568380..2568454,2575241..2575320))
location: region:2566991-2575320:-1
so has part: feature:2575241-2575320:-1:exon
so has part: feature:2568380-2568454:-1:exon
so has part: feature:2566991-2567055:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2575241-2575320:-1:exon

position:2575241:-1
position: 2575241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2568380-2568454:-1:exon

position:2568380:-1
position: 2568380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2568454:-1
position: 2568454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2566991-2567055:-1:exon

position:2567055:-1
position: 2567055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125465399
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125465399
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2898548..3050051)
location: region:2898548-3050051:-1
so has part: feature:2898548-3050051:-1:exon
subclass of: SO_0000010

125465399
type: Gene
SIO_000068: ncbigene

position:2898548:-1
position: 2898548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3050051:-1
position: 3050051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2898548-3050051:-1:exon

LOC125465399
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465399
product: glutamate receptor ionotropic, NMDA 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_048558840.1
SIO_010081: LOC125465399
subclass of: SO_0000673
so part of: LOC125465399
location: complement(join(2898548..2901775,2908163..2908273,2924123..2924268,2925624..2925733,2930912..2931073,2932604..2932761,2933847..2933995,2935019..2935131,2937058..2937176,2938216..2938380,2943280..2943413,2946161..2946296,2948239..2948322,2950619..2950763,2952439..2952613,2955972..2956093,2977024..2977124,2977706..2977768,3027413..3027589,3032100..3032234,3049580..3050051))
location: region:2898548-3050051:-1
so has part: feature:3049580-3050051:-1:exon
so has part: feature:3032100-3032234:-1:exon
so has part: feature:3027413-3027589:-1:exon
so has part: feature:2977706-2977768:-1:exon
so has part: feature:2977024-2977124:-1:exon
so has part: feature:2955972-2956093:-1:exon
so has part: feature:2952439-2952613:-1:exon
so has part: feature:2950619-2950763:-1:exon
so has part: feature:2948239-2948322:-1:exon
so has part: feature:2946161-2946296:-1:exon
so has part: feature:2943280-2943413:-1:exon
so has part: feature:2938216-2938380:-1:exon
so has part: feature:2937058-2937176:-1:exon
so has part: feature:2935019-2935131:-1:exon
so has part: feature:2933847-2933995:-1:exon
so has part: feature:2932604-2932761:-1:exon
so has part: feature:2930912-2931073:-1:exon
so has part: feature:2925624-2925733:-1:exon
so has part: feature:2924123-2924268:-1:exon
so has part: feature:2908163-2908273:-1:exon
so has part: feature:2898548-2901775:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3049580-3050051:-1:exon

position:3049580:-1
position: 3049580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3032100-3032234:-1:exon

position:3032100:-1
position: 3032100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3032234:-1
position: 3032234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3027413-3027589:-1:exon

position:3027413:-1
position: 3027413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3027589:-1
position: 3027589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2977706-2977768:-1:exon

position:2977706:-1
position: 2977706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2977768:-1
position: 2977768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2977024-2977124:-1:exon

position:2977024:-1
position: 2977024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2977124:-1
position: 2977124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2955972-2956093:-1:exon

position:2955972:-1
position: 2955972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2956093:-1
position: 2956093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2952439-2952613:-1:exon

position:2952439:-1
position: 2952439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2952613:-1
position: 2952613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2950619-2950763:-1:exon

position:2950619:-1
position: 2950619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2950763:-1
position: 2950763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2948239-2948322:-1:exon

position:2948239:-1
position: 2948239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2948322:-1
position: 2948322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2946161-2946296:-1:exon

position:2946161:-1
position: 2946161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2946296:-1
position: 2946296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2943280-2943413:-1:exon

position:2943280:-1
position: 2943280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2943413:-1
position: 2943413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2938216-2938380:-1:exon

position:2938216:-1
position: 2938216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2938380:-1
position: 2938380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2937058-2937176:-1:exon

position:2937058:-1
position: 2937058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2937176:-1
position: 2937176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2935019-2935131:-1:exon

position:2935019:-1
position: 2935019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2935131:-1
position: 2935131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2933847-2933995:-1:exon

position:2933847:-1
position: 2933847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2933995:-1
position: 2933995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2932604-2932761:-1:exon

position:2932604:-1
position: 2932604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2932761:-1
position: 2932761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2930912-2931073:-1:exon

position:2930912:-1
position: 2930912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2931073:-1
position: 2931073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2925624-2925733:-1:exon

position:2925624:-1
position: 2925624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2925733:-1
position: 2925733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2924123-2924268:-1:exon

position:2924123:-1
position: 2924123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2924268:-1
position: 2924268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2908163-2908273:-1:exon

position:2908163:-1
position: 2908163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2908273:-1
position: 2908273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2898548-2901775:-1:exon

position:2901775:-1
position: 2901775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125465399
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465399
product: glutamate receptor ionotropic, NMDA 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_048558844.1
SIO_010081: LOC125465399
subclass of: SO_0000673
so part of: LOC125465399
location: complement(join(2898548..2901775,2908163..2908273,2924123..2924268,2925624..2925733,2930912..2931073,2932604..2932761,2933847..2933995,2935019..2935131,2937058..2937176,2938216..2938380,2943280..2943413,2946161..2946296,2948239..2948322,2950619..2950763,2952439..2952613,2955972..2956093,2977024..2977124,3027413..3027589,3032100..3032234,3049580..3050050))
location: region:2898548-3050050:-1
so has part: feature:3049580-3050050:-1:exon
so has part: feature:3032100-3032234:-1:exon
so has part: feature:3027413-3027589:-1:exon
so has part: feature:2977024-2977124:-1:exon
so has part: feature:2955972-2956093:-1:exon
so has part: feature:2952439-2952613:-1:exon
so has part: feature:2950619-2950763:-1:exon
so has part: feature:2948239-2948322:-1:exon
so has part: feature:2946161-2946296:-1:exon
so has part: feature:2943280-2943413:-1:exon
so has part: feature:2938216-2938380:-1:exon
so has part: feature:2937058-2937176:-1:exon
so has part: feature:2935019-2935131:-1:exon
so has part: feature:2933847-2933995:-1:exon
so has part: feature:2932604-2932761:-1:exon
so has part: feature:2930912-2931073:-1:exon
so has part: feature:2925624-2925733:-1:exon
so has part: feature:2924123-2924268:-1:exon
so has part: feature:2908163-2908273:-1:exon
so has part: feature:2898548-2901775:-1:exon

position:3050050:-1
position: 3050050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3049580-3050050:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3032100-3032234:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3027413-3027589:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2977024-2977124:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2955972-2956093:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2952439-2952613:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2950619-2950763:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2948239-2948322:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2946161-2946296:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2943280-2943413:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2938216-2938380:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2937058-2937176:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2935019-2935131:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2933847-2933995:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2932604-2932761:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2930912-2931073:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2925624-2925733:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2924123-2924268:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2908163-2908273:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2898548-2901775:-1:exon

LOC125465399
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465399
product: glutamate receptor ionotropic, NMDA 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_048558846.1
SIO_010081: LOC125465399
subclass of: SO_0000673
so part of: LOC125465399
location: complement(join(2898548..2901775,2924123..2924268,2925624..2925733,2930912..2931073,2932604..2932761,2933847..2933995,2935019..2935131,2937058..2937176,2938216..2938380,2943280..2943413,2946161..2946296,2948239..2948322,2950619..2950763,2952439..2952613,2955972..2956093,2977024..2977124,2977706..2977768,3027413..3027589,3032100..3032234,3049580..3050050))
location: region:2898548-3050050:-1
so has part: feature:3049580-3050050:-1:exon
so has part: feature:3032100-3032234:-1:exon
so has part: feature:3027413-3027589:-1:exon
so has part: feature:2977706-2977768:-1:exon
so has part: feature:2977024-2977124:-1:exon
so has part: feature:2955972-2956093:-1:exon
so has part: feature:2952439-2952613:-1:exon
so has part: feature:2950619-2950763:-1:exon
so has part: feature:2948239-2948322:-1:exon
so has part: feature:2946161-2946296:-1:exon
so has part: feature:2943280-2943413:-1:exon
so has part: feature:2938216-2938380:-1:exon
so has part: feature:2937058-2937176:-1:exon
so has part: feature:2935019-2935131:-1:exon
so has part: feature:2933847-2933995:-1:exon
so has part: feature:2932604-2932761:-1:exon
so has part: feature:2930912-2931073:-1:exon
so has part: feature:2925624-2925733:-1:exon
so has part: feature:2924123-2924268:-1:exon
so has part: feature:2898548-2901775:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3049580-3050050:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3032100-3032234:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3027413-3027589:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2977706-2977768:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2977024-2977124:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2955972-2956093:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2952439-2952613:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2950619-2950763:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2948239-2948322:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2946161-2946296:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2943280-2943413:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2938216-2938380:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2937058-2937176:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2935019-2935131:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2933847-2933995:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2932604-2932761:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2930912-2931073:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2925624-2925733:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2924123-2924268:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2898548-2901775:-1:exon

LOC125465399
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465399
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate receptor ionotropic, NMDA 1 isoform X4
translation: MDRLIGLLLGFSAVFPLQSQAAPKVVNIGAVLSTKKTENIFREAVAQANRKHGTYKIQLNATAVTHKPNAIQMALAVCEDLISSQVYAILVSHPPGPSDHLTPTPVSYTAGFYRIPVIGLTTRMSIYSDKSIHLSFLRTVPPYSHQAHVWFEMMRRFRWGHIILVVSNDHEGRAAQKKLETLLEEKESKAEKVLQFEPGTTNMTSMLLEAKELEARVIILSASEDDAVTMYKTATLLNMTGSGYVWLVGEREISGRAMQHVPEGVIGLQLIDGKNETAHINDAVGIVSQSIHELFEKENITDPPKGCVGNTNIWKTGPLFKRVLLSTKYREGFTGQVEFNDEGDRKFSNYSIVNVQKGKLVQIGVYNGTDVLLNDKKIIWPGGELNTPKGFQMSTKLKIVSIYQEPFVYVKPTLPDGTCEEEYTISGDPIKKVICTGPNATVPGRPIVPQCCYGFCIDLLIKLASTPTLNFTYEVHLVHDGKFGTQERVNNSNKKEWNGMMGELLSGLGDMIVAPLTINNERAQYIEFSKPYKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYENAADAIQAVRDGKLHAFIWDSAVLEFEASQKCDLITTGELFFRSGFGIGMRKDSPWKQAVSLAILSFHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGSAEPDPKKKAPFRSLTSTLTSSFKRRRSSKDTQYHPDISGQLNLSDPSVSTVV
SIO_010081: LOC125465399
subclass of: SO_0000673
so part of: LOC125465399
location: complement(join(2901710..2901775,2908163..2908273,2924123..2924268,2925624..2925733,2930912..2931073,2932604..2932761,2933847..2933995,2935019..2935131,2937058..2937176,2938216..2938380,2943280..2943413,2946161..2946296,2948239..2948322,2950619..2950763,2952439..2952613,2955972..2956093,2977024..2977124,3027413..3027589,3032100..3032234,3049580..3049834))
location: region:2901710-3049834:-1
so has part: feature:3049580-3049834:-1:exon
so has part: feature:3032100-3032234:-1:exon
so has part: feature:3027413-3027589:-1:exon
so has part: feature:2977024-2977124:-1:exon
so has part: feature:2955972-2956093:-1:exon
so has part: feature:2952439-2952613:-1:exon
so has part: feature:2950619-2950763:-1:exon
so has part: feature:2948239-2948322:-1:exon
so has part: feature:2946161-2946296:-1:exon
so has part: feature:2943280-2943413:-1:exon
so has part: feature:2938216-2938380:-1:exon
so has part: feature:2937058-2937176:-1:exon
so has part: feature:2935019-2935131:-1:exon
so has part: feature:2933847-2933995:-1:exon
so has part: feature:2932604-2932761:-1:exon
so has part: feature:2930912-2931073:-1:exon
so has part: feature:2925624-2925733:-1:exon
so has part: feature:2924123-2924268:-1:exon
so has part: feature:2908163-2908273:-1:exon
so has part: feature:2901710-2901775:-1:exon

XP_048414801.1
type: Protein
SIO_000068: ncbiprotein

position:2901710:-1
position: 2901710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3049834:-1
position: 3049834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3049580-3049834:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3032100-3032234:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3027413-3027589:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2977024-2977124:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2955972-2956093:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2952439-2952613:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2950619-2950763:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2948239-2948322:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2946161-2946296:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2943280-2943413:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2938216-2938380:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2937058-2937176:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2935019-2935131:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2933847-2933995:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2932604-2932761:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2930912-2931073:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2925624-2925733:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2924123-2924268:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2908163-2908273:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2901710-2901775:-1:exon

LOC125465399
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465399
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate receptor ionotropic, NMDA 1 isoform X6
translation: MDRLIGLLLGFSAVFPLQSQAAPKVVNIGAVLSTKKTENIFREAVAQANRKHGTYKIQLNATAVTHKPNAIQMALAVCEDLISSQVYAILVSHPPGPSDHLTPTPVSYTAGFYRIPVIGLTTRMSIYSDKSIHLSFLRTVPPYSHQAHVWFEMMRRFRWGHIILVVSNDHEGRAAQKKLETLLEEKESKNKKRNFENNDQHSYDSRRGPKAEKVLQFEPGTTNMTSMLLEAKELEARVIILSASEDDAVTMYKTATLLNMTGSGYVWLVGEREISGRAMQHVPEGVIGLQLIDGKNETAHINDAVGIVSQSIHELFEKENITDPPKGCVGNTNIWKTGPLFKRVLLSTKYREGFTGQVEFNDEGDRKFSNYSIVNVQKGKLVQIGVYNGTDVLLNDKKIIWPGGELNTPKGFQMSTKLKIVSIYQEPFVYVKPTLPDGTCEEEYTISGDPIKKVICTGPNATVPGRPIVPQCCYGFCIDLLIKLASTPTLNFTYEVHLVHDGKFGTQERVNNSNKKEWNGMMGELLSGLGDMIVAPLTINNERAQYIEFSKPYKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYENAADAIQAVRDGKLHAFIWDSAVLEFEASQKCDLITTGELFFRSGFGIGMRKDSPWKQAVSLAILSFHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQQYHPDISGQLNLSDPSVSTVV
SIO_010081: LOC125465399
subclass of: SO_0000673
so part of: LOC125465399
location: complement(join(2901710..2901775,2924123..2924268,2925624..2925733,2930912..2931073,2932604..2932761,2933847..2933995,2935019..2935131,2937058..2937176,2938216..2938380,2943280..2943413,2946161..2946296,2948239..2948322,2950619..2950763,2952439..2952613,2955972..2956093,2977024..2977124,2977706..2977768,3027413..3027589,3032100..3032234,3049580..3049834))
location: region:2901710-3049834:-1
so has part: feature:3049580-3049834:-1:exon
so has part: feature:3032100-3032234:-1:exon
so has part: feature:3027413-3027589:-1:exon
so has part: feature:2977706-2977768:-1:exon
so has part: feature:2977024-2977124:-1:exon
so has part: feature:2955972-2956093:-1:exon
so has part: feature:2952439-2952613:-1:exon
so has part: feature:2950619-2950763:-1:exon
so has part: feature:2948239-2948322:-1:exon
so has part: feature:2946161-2946296:-1:exon
so has part: feature:2943280-2943413:-1:exon
so has part: feature:2938216-2938380:-1:exon
so has part: feature:2937058-2937176:-1:exon
so has part: feature:2935019-2935131:-1:exon
so has part: feature:2933847-2933995:-1:exon
so has part: feature:2932604-2932761:-1:exon
so has part: feature:2930912-2931073:-1:exon
so has part: feature:2925624-2925733:-1:exon
so has part: feature:2924123-2924268:-1:exon
so has part: feature:2901710-2901775:-1:exon

XP_048414803.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3049580-3049834:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3032100-3032234:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3027413-3027589:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2977706-2977768:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2977024-2977124:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2955972-2956093:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2952439-2952613:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2950619-2950763:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2948239-2948322:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2946161-2946296:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2943280-2943413:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2938216-2938380:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2937058-2937176:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2935019-2935131:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2933847-2933995:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2932604-2932761:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2930912-2931073:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2925624-2925733:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2924123-2924268:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2901710-2901775:-1:exon

LOC125465399
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465399
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate receptor ionotropic, NMDA 1 isoform X1
translation: MDRLIGLLLGFSAVFPLQSQAAPKVVNIGAVLSTKKTENIFREAVAQANRKHGTYKIQLNATAVTHKPNAIQMALAVCEDLISSQVYAILVSHPPGPSDHLTPTPVSYTAGFYRIPVIGLTTRMSIYSDKSIHLSFLRTVPPYSHQAHVWFEMMRRFRWGHIILVVSNDHEGRAAQKKLETLLEEKESKNKKRNFENNDQHSYDSRRGPKAEKVLQFEPGTTNMTSMLLEAKELEARVIILSASEDDAVTMYKTATLLNMTGSGYVWLVGEREISGRAMQHVPEGVIGLQLIDGKNETAHINDAVGIVSQSIHELFEKENITDPPKGCVGNTNIWKTGPLFKRVLLSTKYREGFTGQVEFNDEGDRKFSNYSIVNVQKGKLVQIGVYNGTDVLLNDKKIIWPGGELNTPKGFQMSTKLKIVSIYQEPFVYVKPTLPDGTCEEEYTISGDPIKKVICTGPNATVPGRPIVPQCCYGFCIDLLIKLASTPTLNFTYEVHLVHDGKFGTQERVNNSNKKEWNGMMGELLSGLGDMIVAPLTINNERAQYIEFSKPYKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYENAADAIQAVRDGKLHAFIWDSAVLEFEASQKCDLITTGELFFRSGFGIGMRKDSPWKQAVSLAILSFHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGSAEPDPKKKAPFRSLTSTLTSSFKRRRSSKDTQYHPDISGQLNLSDPSVSTVV
SIO_010081: LOC125465399
subclass of: SO_0000673
so part of: LOC125465399
location: complement(join(2901710..2901775,2908163..2908273,2924123..2924268,2925624..2925733,2930912..2931073,2932604..2932761,2933847..2933995,2935019..2935131,2937058..2937176,2938216..2938380,2943280..2943413,2946161..2946296,2948239..2948322,2950619..2950763,2952439..2952613,2955972..2956093,2977024..2977124,2977706..2977768,3027413..3027589,3032100..3032234,3049580..3049834))
location: region:2901710-3049834:-1
so has part: feature:3049580-3049834:-1:exon
so has part: feature:3032100-3032234:-1:exon
so has part: feature:3027413-3027589:-1:exon
so has part: feature:2977706-2977768:-1:exon
so has part: feature:2977024-2977124:-1:exon
so has part: feature:2955972-2956093:-1:exon
so has part: feature:2952439-2952613:-1:exon
so has part: feature:2950619-2950763:-1:exon
so has part: feature:2948239-2948322:-1:exon
so has part: feature:2946161-2946296:-1:exon
so has part: feature:2943280-2943413:-1:exon
so has part: feature:2938216-2938380:-1:exon
so has part: feature:2937058-2937176:-1:exon
so has part: feature:2935019-2935131:-1:exon
so has part: feature:2933847-2933995:-1:exon
so has part: feature:2932604-2932761:-1:exon
so has part: feature:2930912-2931073:-1:exon
so has part: feature:2925624-2925733:-1:exon
so has part: feature:2924123-2924268:-1:exon
so has part: feature:2908163-2908273:-1:exon
so has part: feature:2901710-2901775:-1:exon

XP_048414797.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3049580-3049834:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3032100-3032234:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3027413-3027589:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2977706-2977768:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2977024-2977124:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2955972-2956093:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2952439-2952613:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2950619-2950763:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2948239-2948322:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2946161-2946296:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2943280-2943413:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2938216-2938380:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2937058-2937176:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2935019-2935131:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2933847-2933995:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2932604-2932761:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2930912-2931073:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2925624-2925733:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2924123-2924268:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2908163-2908273:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2901710-2901775:-1:exon

LOC125465399
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465399
product: glutamate receptor ionotropic, NMDA 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048558841.1
SIO_010081: LOC125465399
subclass of: SO_0000673
so part of: LOC125465399
location: complement(join(2902124..2903125,2908163..2908273,2924123..2924268,2925624..2925733,2930912..2931073,2932604..2932761,2933847..2933995,2935019..2935131,2937058..2937176,2938216..2938380,2943280..2943413,2946161..2946296,2948239..2948322,2950619..2950763,2952439..2952613,2955972..2956093,2977024..2977124,2977706..2977768,3027413..3027589,3032100..3032234,3049580..3050051))
location: region:2902124-3050051:-1
so has part: feature:3049580-3050051:-1:exon
so has part: feature:3032100-3032234:-1:exon
so has part: feature:3027413-3027589:-1:exon
so has part: feature:2977706-2977768:-1:exon
so has part: feature:2977024-2977124:-1:exon
so has part: feature:2955972-2956093:-1:exon
so has part: feature:2952439-2952613:-1:exon
so has part: feature:2950619-2950763:-1:exon
so has part: feature:2948239-2948322:-1:exon
so has part: feature:2946161-2946296:-1:exon
so has part: feature:2943280-2943413:-1:exon
so has part: feature:2938216-2938380:-1:exon
so has part: feature:2937058-2937176:-1:exon
so has part: feature:2935019-2935131:-1:exon
so has part: feature:2933847-2933995:-1:exon
so has part: feature:2932604-2932761:-1:exon
so has part: feature:2930912-2931073:-1:exon
so has part: feature:2925624-2925733:-1:exon
so has part: feature:2924123-2924268:-1:exon
so has part: feature:2908163-2908273:-1:exon
so has part: feature:2902124-2903125:-1:exon

position:2902124:-1
position: 2902124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3049580-3050051:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3032100-3032234:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3027413-3027589:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2977706-2977768:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2977024-2977124:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2955972-2956093:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2952439-2952613:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2950619-2950763:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2948239-2948322:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2946161-2946296:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2943280-2943413:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2938216-2938380:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2937058-2937176:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2935019-2935131:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2933847-2933995:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2932604-2932761:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2930912-2931073:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2925624-2925733:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2924123-2924268:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2908163-2908273:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2902124-2903125:-1:exon

position:2903125:-1
position: 2903125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125465399
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465399
product: glutamate receptor ionotropic, NMDA 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_048558847.1
SIO_010081: LOC125465399
subclass of: SO_0000673
so part of: LOC125465399
location: complement(join(2902124..2903125,2924123..2924268,2925624..2925733,2930912..2931073,2932604..2932761,2933847..2933995,2935019..2935131,2937058..2937176,2938216..2938380,2943280..2943413,2946161..2946296,2948239..2948322,2950619..2950763,2952439..2952613,2955972..2956093,2977024..2977124,2977706..2977768,3027413..3027589,3032100..3032234,3049580..3050050))
location: region:2902124-3050050:-1
so has part: feature:3049580-3050050:-1:exon
so has part: feature:3032100-3032234:-1:exon
so has part: feature:3027413-3027589:-1:exon
so has part: feature:2977706-2977768:-1:exon
so has part: feature:2977024-2977124:-1:exon
so has part: feature:2955972-2956093:-1:exon
so has part: feature:2952439-2952613:-1:exon
so has part: feature:2950619-2950763:-1:exon
so has part: feature:2948239-2948322:-1:exon
so has part: feature:2946161-2946296:-1:exon
so has part: feature:2943280-2943413:-1:exon
so has part: feature:2938216-2938380:-1:exon
so has part: feature:2937058-2937176:-1:exon
so has part: feature:2935019-2935131:-1:exon
so has part: feature:2933847-2933995:-1:exon
so has part: feature:2932604-2932761:-1:exon
so has part: feature:2930912-2931073:-1:exon
so has part: feature:2925624-2925733:-1:exon
so has part: feature:2924123-2924268:-1:exon
so has part: feature:2902124-2903125:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3049580-3050050:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3032100-3032234:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3027413-3027589:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2977706-2977768:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2977024-2977124:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2955972-2956093:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2952439-2952613:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2950619-2950763:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2948239-2948322:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2946161-2946296:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2943280-2943413:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2938216-2938380:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2937058-2937176:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2935019-2935131:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2933847-2933995:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2932604-2932761:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2930912-2931073:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2925624-2925733:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2924123-2924268:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2902124-2903125:-1:exon

LOC125465399
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465399
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate receptor ionotropic, NMDA 1 isoform X7
translation: MDRLIGLLLGFSAVFPLQSQAAPKVVNIGAVLSTKKTENIFREAVAQANRKHGTYKIQLNATAVTHKPNAIQMALAVCEDLISSQVYAILVSHPPGPSDHLTPTPVSYTAGFYRIPVIGLTTRMSIYSDKSIHLSFLRTVPPYSHQAHVWFEMMRRFRWGHIILVVSNDHEGRAAQKKLETLLEEKESKNKKRNFENNDQHSYDSRRGPKAEKVLQFEPGTTNMTSMLLEAKELEARVIILSASEDDAVTMYKTATLLNMTGSGYVWLVGEREISGRAMQHVPEGVIGLQLIDGKNETAHINDAVGIVSQSIHELFEKENITDPPKGCVGNTNIWKTGPLFKRVLLSTKYREGFTGQVEFNDEGDRKFSNYSIVNVQKGKLVQIGVYNGTDVLLNDKKIIWPGGELNTPKGFQMSTKLKIVSIYQEPFVYVKPTLPDGTCEEEYTISGDPIKKVICTGPNATVPGRPIVPQCCYGFCIDLLIKLASTPTLNFTYEVHLVHDGKFGTQERVNNSNKKEWNGMMGELLSGLGDMIVAPLTINNERAQYIEFSKPYKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYENAADAIQAVRDGKLHAFIWDSAVLEFEASQKCDLITTGELFFRSGFGIGMRKDSPWKQAVSLAILSFHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQILQCEHSLSNINPMIG
SIO_010081: LOC125465399
subclass of: SO_0000673
so part of: LOC125465399
location: complement(join(2903075..2903125,2924123..2924268,2925624..2925733,2930912..2931073,2932604..2932761,2933847..2933995,2935019..2935131,2937058..2937176,2938216..2938380,2943280..2943413,2946161..2946296,2948239..2948322,2950619..2950763,2952439..2952613,2955972..2956093,2977024..2977124,2977706..2977768,3027413..3027589,3032100..3032234,3049580..3049834))
location: region:2903075-3049834:-1
so has part: feature:3049580-3049834:-1:exon
so has part: feature:3032100-3032234:-1:exon
so has part: feature:3027413-3027589:-1:exon
so has part: feature:2977706-2977768:-1:exon
so has part: feature:2977024-2977124:-1:exon
so has part: feature:2955972-2956093:-1:exon
so has part: feature:2952439-2952613:-1:exon
so has part: feature:2950619-2950763:-1:exon
so has part: feature:2948239-2948322:-1:exon
so has part: feature:2946161-2946296:-1:exon
so has part: feature:2943280-2943413:-1:exon
so has part: feature:2938216-2938380:-1:exon
so has part: feature:2937058-2937176:-1:exon
so has part: feature:2935019-2935131:-1:exon
so has part: feature:2933847-2933995:-1:exon
so has part: feature:2932604-2932761:-1:exon
so has part: feature:2930912-2931073:-1:exon
so has part: feature:2925624-2925733:-1:exon
so has part: feature:2924123-2924268:-1:exon
so has part: feature:2903075-2903125:-1:exon

XP_048414804.1
type: Protein
SIO_000068: ncbiprotein

position:2903075:-1
position: 2903075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3049580-3049834:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3032100-3032234:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3027413-3027589:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2977706-2977768:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2977024-2977124:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2955972-2956093:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2952439-2952613:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2950619-2950763:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2948239-2948322:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2946161-2946296:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2943280-2943413:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2938216-2938380:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2937058-2937176:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2935019-2935131:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2933847-2933995:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2932604-2932761:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2930912-2931073:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2925624-2925733:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2924123-2924268:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2903075-2903125:-1:exon

LOC125465399
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465399
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate receptor ionotropic, NMDA 1 isoform X2
translation: MDRLIGLLLGFSAVFPLQSQAAPKVVNIGAVLSTKKTENIFREAVAQANRKHGTYKIQLNATAVTHKPNAIQMALAVCEDLISSQVYAILVSHPPGPSDHLTPTPVSYTAGFYRIPVIGLTTRMSIYSDKSIHLSFLRTVPPYSHQAHVWFEMMRRFRWGHIILVVSNDHEGRAAQKKLETLLEEKESKNKKRNFENNDQHSYDSRRGPKAEKVLQFEPGTTNMTSMLLEAKELEARVIILSASEDDAVTMYKTATLLNMTGSGYVWLVGEREISGRAMQHVPEGVIGLQLIDGKNETAHINDAVGIVSQSIHELFEKENITDPPKGCVGNTNIWKTGPLFKRVLLSTKYREGFTGQVEFNDEGDRKFSNYSIVNVQKGKLVQIGVYNGTDVLLNDKKIIWPGGELNTPKGFQMSTKLKIVSIYQEPFVYVKPTLPDGTCEEEYTISGDPIKKVICTGPNATVPGRPIVPQCCYGFCIDLLIKLASTPTLNFTYEVHLVHDGKFGTQERVNNSNKKEWNGMMGELLSGLGDMIVAPLTINNERAQYIEFSKPYKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYENAADAIQAVRDGKLHAFIWDSAVLEFEASQKCDLITTGELFFRSGFGIGMRKDSPWKQAVSLAILSFHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGSAEPDPKKKAPFRSLTSTLTSSFKRRRSSKDTILQCEHSLSNINPMIG
SIO_010081: LOC125465399
subclass of: SO_0000673
so part of: LOC125465399
location: complement(join(2903075..2903125,2908163..2908273,2924123..2924268,2925624..2925733,2930912..2931073,2932604..2932761,2933847..2933995,2935019..2935131,2937058..2937176,2938216..2938380,2943280..2943413,2946161..2946296,2948239..2948322,2950619..2950763,2952439..2952613,2955972..2956093,2977024..2977124,2977706..2977768,3027413..3027589,3032100..3032234,3049580..3049834))
location: region:2903075-3049834:-1
so has part: feature:3049580-3049834:-1:exon
so has part: feature:3032100-3032234:-1:exon
so has part: feature:3027413-3027589:-1:exon
so has part: feature:2977706-2977768:-1:exon
so has part: feature:2977024-2977124:-1:exon
so has part: feature:2955972-2956093:-1:exon
so has part: feature:2952439-2952613:-1:exon
so has part: feature:2950619-2950763:-1:exon
so has part: feature:2948239-2948322:-1:exon
so has part: feature:2946161-2946296:-1:exon
so has part: feature:2943280-2943413:-1:exon
so has part: feature:2938216-2938380:-1:exon
so has part: feature:2937058-2937176:-1:exon
so has part: feature:2935019-2935131:-1:exon
so has part: feature:2933847-2933995:-1:exon
so has part: feature:2932604-2932761:-1:exon
so has part: feature:2930912-2931073:-1:exon
so has part: feature:2925624-2925733:-1:exon
so has part: feature:2924123-2924268:-1:exon
so has part: feature:2908163-2908273:-1:exon
so has part: feature:2903075-2903125:-1:exon

XP_048414798.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3049580-3049834:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3032100-3032234:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3027413-3027589:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2977706-2977768:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2977024-2977124:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2955972-2956093:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2952439-2952613:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2950619-2950763:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2948239-2948322:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2946161-2946296:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2943280-2943413:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2938216-2938380:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2937058-2937176:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2935019-2935131:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2933847-2933995:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2932604-2932761:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2930912-2931073:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2925624-2925733:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2924123-2924268:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2908163-2908273:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2903075-2903125:-1:exon

LOC125465399
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465399
product: glutamate receptor ionotropic, NMDA 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048558842.1
SIO_010081: LOC125465399
subclass of: SO_0000673
so part of: LOC125465399
location: complement(join(2905133..2905151,2908163..2908273,2924123..2924268,2925624..2925733,2930912..2931073,2932604..2932761,2933847..2933995,2935019..2935131,2937058..2937176,2938216..2938380,2943280..2943413,2946161..2946296,2948239..2948322,2950619..2950763,2952439..2952613,2955972..2956093,2977024..2977124,2977706..2977768,3027413..3027589,3032100..3032234,3049580..3050050))
location: region:2905133-3050050:-1
so has part: feature:3049580-3050050:-1:exon
so has part: feature:3032100-3032234:-1:exon
so has part: feature:3027413-3027589:-1:exon
so has part: feature:2977706-2977768:-1:exon
so has part: feature:2977024-2977124:-1:exon
so has part: feature:2955972-2956093:-1:exon
so has part: feature:2952439-2952613:-1:exon
so has part: feature:2950619-2950763:-1:exon
so has part: feature:2948239-2948322:-1:exon
so has part: feature:2946161-2946296:-1:exon
so has part: feature:2943280-2943413:-1:exon
so has part: feature:2938216-2938380:-1:exon
so has part: feature:2937058-2937176:-1:exon
so has part: feature:2935019-2935131:-1:exon
so has part: feature:2933847-2933995:-1:exon
so has part: feature:2932604-2932761:-1:exon
so has part: feature:2930912-2931073:-1:exon
so has part: feature:2925624-2925733:-1:exon
so has part: feature:2924123-2924268:-1:exon
so has part: feature:2908163-2908273:-1:exon
so has part: feature:2905133-2905151:-1:exon

position:2905133:-1
position: 2905133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3049580-3050050:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3032100-3032234:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3027413-3027589:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2977706-2977768:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2977024-2977124:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2955972-2956093:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2952439-2952613:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2950619-2950763:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2948239-2948322:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2946161-2946296:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2943280-2943413:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2938216-2938380:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2937058-2937176:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2935019-2935131:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2933847-2933995:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2932604-2932761:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2930912-2931073:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2925624-2925733:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2924123-2924268:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2908163-2908273:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2905133-2905151:-1:exon

position:2905151:-1
position: 2905151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125465399
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465399
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate receptor ionotropic, NMDA 1 isoform X3
translation: MDRLIGLLLGFSAVFPLQSQAAPKVVNIGAVLSTKKTENIFREAVAQANRKHGTYKIQLNATAVTHKPNAIQMALAVCEDLISSQVYAILVSHPPGPSDHLTPTPVSYTAGFYRIPVIGLTTRMSIYSDKSIHLSFLRTVPPYSHQAHVWFEMMRRFRWGHIILVVSNDHEGRAAQKKLETLLEEKESKNKKRNFENNDQHSYDSRRGPKAEKVLQFEPGTTNMTSMLLEAKELEARVIILSASEDDAVTMYKTATLLNMTGSGYVWLVGEREISGRAMQHVPEGVIGLQLIDGKNETAHINDAVGIVSQSIHELFEKENITDPPKGCVGNTNIWKTGPLFKRVLLSTKYREGFTGQVEFNDEGDRKFSNYSIVNVQKGKLVQIGVYNGTDVLLNDKKIIWPGGELNTPKGFQMSTKLKIVSIYQEPFVYVKPTLPDGTCEEEYTISGDPIKKVICTGPNATVPGRPIVPQCCYGFCIDLLIKLASTPTLNFTYEVHLVHDGKFGTQERVNNSNKKEWNGMMGELLSGLGDMIVAPLTINNERAQYIEFSKPYKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYENAADAIQAVRDGKLHAFIWDSAVLEFEASQKCDLITTGELFFRSGFGIGMRKDSPWKQAVSLAILSFHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGSAEPDPKKKAPFRSLTSTLTSSFKRRRSSKDTIRR
SIO_010081: LOC125465399
subclass of: SO_0000673
so part of: LOC125465399
location: complement(join(2905140..2905151,2908163..2908273,2924123..2924268,2925624..2925733,2930912..2931073,2932604..2932761,2933847..2933995,2935019..2935131,2937058..2937176,2938216..2938380,2943280..2943413,2946161..2946296,2948239..2948322,2950619..2950763,2952439..2952613,2955972..2956093,2977024..2977124,2977706..2977768,3027413..3027589,3032100..3032234,3049580..3049834))
location: region:2905140-3049834:-1
so has part: feature:3049580-3049834:-1:exon
so has part: feature:3032100-3032234:-1:exon
so has part: feature:3027413-3027589:-1:exon
so has part: feature:2977706-2977768:-1:exon
so has part: feature:2977024-2977124:-1:exon
so has part: feature:2955972-2956093:-1:exon
so has part: feature:2952439-2952613:-1:exon
so has part: feature:2950619-2950763:-1:exon
so has part: feature:2948239-2948322:-1:exon
so has part: feature:2946161-2946296:-1:exon
so has part: feature:2943280-2943413:-1:exon
so has part: feature:2938216-2938380:-1:exon
so has part: feature:2937058-2937176:-1:exon
so has part: feature:2935019-2935131:-1:exon
so has part: feature:2933847-2933995:-1:exon
so has part: feature:2932604-2932761:-1:exon
so has part: feature:2930912-2931073:-1:exon
so has part: feature:2925624-2925733:-1:exon
so has part: feature:2924123-2924268:-1:exon
so has part: feature:2908163-2908273:-1:exon
so has part: feature:2905140-2905151:-1:exon

XP_048414799.1
type: Protein
SIO_000068: ncbiprotein

position:2905140:-1
position: 2905140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3049580-3049834:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3032100-3032234:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3027413-3027589:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2977706-2977768:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2977024-2977124:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2955972-2956093:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2952439-2952613:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2950619-2950763:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2948239-2948322:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2946161-2946296:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2943280-2943413:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2938216-2938380:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2937058-2937176:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2935019-2935131:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2933847-2933995:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2932604-2932761:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2930912-2931073:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2925624-2925733:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2924123-2924268:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2908163-2908273:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2905140-2905151:-1:exon

LOC125465399
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465399
product: glutamate receptor ionotropic, NMDA 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_048558850.1
SIO_010081: LOC125465399
subclass of: SO_0000673
so part of: LOC125465399
location: complement(join(2908782..2909121,2924123..2924268,2925624..2925733,2930912..2931073,2932604..2932761,2933847..2933995,2935019..2935131,2937058..2937176,2938216..2938380,2943280..2943413,2946161..2946296,2948239..2948322,2950619..2950763,2952439..2952613,2955972..2956093,2977024..2977124,2977706..2977768,3027413..3027589,3032100..3032234,3049580..3050050))
location: region:2908782-3050050:-1
so has part: feature:3049580-3050050:-1:exon
so has part: feature:3032100-3032234:-1:exon
so has part: feature:3027413-3027589:-1:exon
so has part: feature:2977706-2977768:-1:exon
so has part: feature:2977024-2977124:-1:exon
so has part: feature:2955972-2956093:-1:exon
so has part: feature:2952439-2952613:-1:exon
so has part: feature:2950619-2950763:-1:exon
so has part: feature:2948239-2948322:-1:exon
so has part: feature:2946161-2946296:-1:exon
so has part: feature:2943280-2943413:-1:exon
so has part: feature:2938216-2938380:-1:exon
so has part: feature:2937058-2937176:-1:exon
so has part: feature:2935019-2935131:-1:exon
so has part: feature:2933847-2933995:-1:exon
so has part: feature:2932604-2932761:-1:exon
so has part: feature:2930912-2931073:-1:exon
so has part: feature:2925624-2925733:-1:exon
so has part: feature:2924123-2924268:-1:exon
so has part: feature:2908782-2909121:-1:exon

position:2908782:-1
position: 2908782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3049580-3050050:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3032100-3032234:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3027413-3027589:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2977706-2977768:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2977024-2977124:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2955972-2956093:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2952439-2952613:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2950619-2950763:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2948239-2948322:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2946161-2946296:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2943280-2943413:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2938216-2938380:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2937058-2937176:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2935019-2935131:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2933847-2933995:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2932604-2932761:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2930912-2931073:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2925624-2925733:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2924123-2924268:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2908782-2909121:-1:exon

position:2909121:-1
position: 2909121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125465399
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465399
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate receptor ionotropic, NMDA 1 isoform X9
translation: MDRLIGLLLGFSAVFPLQSQAAPKVVNIGAVLSTKKTENIFREAVAQANRKHGTYKIQLNATAVTHKPNAIQMALAVCEDLISSQVYAILVSHPPGPSDHLTPTPVSYTAGFYRIPVIGLTTRMSIYSDKSIHLSFLRTVPPYSHQAHVWFEMMRRFRWGHIILVVSNDHEGRAAQKKLETLLEEKESKNKKRNFENNDQHSYDSRRGPKAEKVLQFEPGTTNMTSMLLEAKELEARVIILSASEDDAVTMYKTATLLNMTGSGYVWLVGEREISGRAMQHVPEGVIGLQLIDGKNETAHINDAVGIVSQSIHELFEKENITDPPKGCVGNTNIWKTGPLFKRVLLSTKYREGFTGQVEFNDEGDRKFSNYSIVNVQKGKLVQIGVYNGTDVLLNDKKIIWPGGELNTPKGFQMSTKLKIVSIYQEPFVYVKPTLPDGTCEEEYTISGDPIKKVICTGPNATVPGRPIVPQCCYGFCIDLLIKLASTPTLNFTYEVHLVHDGKFGTQERVNNSNKKEWNGMMGELLSGLGDMIVAPLTINNERAQYIEFSKPYKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYENAADAIQAVRDGKLHAFIWDSAVLEFEASQKCDLITTGELFFRSGFGIGMRKDSPWKQAVSLAILSFHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQ
SIO_010081: LOC125465399
subclass of: SO_0000673
so part of: LOC125465399
location: complement(join(2909119..2909121,2924123..2924268,2925624..2925733,2930912..2931073,2932604..2932761,2933847..2933995,2935019..2935131,2937058..2937176,2938216..2938380,2943280..2943413,2946161..2946296,2948239..2948322,2950619..2950763,2952439..2952613,2955972..2956093,2977024..2977124,2977706..2977768,3027413..3027589,3032100..3032234,3049580..3049834))
location: region:2909119-3049834:-1
so has part: feature:3049580-3049834:-1:exon
so has part: feature:3032100-3032234:-1:exon
so has part: feature:3027413-3027589:-1:exon
so has part: feature:2977706-2977768:-1:exon
so has part: feature:2977024-2977124:-1:exon
so has part: feature:2955972-2956093:-1:exon
so has part: feature:2952439-2952613:-1:exon
so has part: feature:2950619-2950763:-1:exon
so has part: feature:2948239-2948322:-1:exon
so has part: feature:2946161-2946296:-1:exon
so has part: feature:2943280-2943413:-1:exon
so has part: feature:2938216-2938380:-1:exon
so has part: feature:2937058-2937176:-1:exon
so has part: feature:2935019-2935131:-1:exon
so has part: feature:2933847-2933995:-1:exon
so has part: feature:2932604-2932761:-1:exon
so has part: feature:2930912-2931073:-1:exon
so has part: feature:2925624-2925733:-1:exon
so has part: feature:2924123-2924268:-1:exon
so has part: feature:2909119-2909121:-1:exon

XP_048414807.1
type: Protein
SIO_000068: ncbiprotein

position:2909119:-1
position: 2909119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3049580-3049834:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3032100-3032234:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3027413-3027589:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2977706-2977768:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2977024-2977124:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2955972-2956093:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2952439-2952613:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2950619-2950763:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2948239-2948322:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2946161-2946296:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2943280-2943413:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2938216-2938380:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2937058-2937176:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2935019-2935131:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2933847-2933995:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2932604-2932761:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2930912-2931073:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2925624-2925733:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2924123-2924268:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2909119-2909121:-1:exon

LOC125465399
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465399
product: glutamate receptor ionotropic, NMDA 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_048558845.1
SIO_010081: LOC125465399
subclass of: SO_0000673
so part of: LOC125465399
location: complement(join(2912389..2912529,2924123..2924268,2925624..2925733,2930912..2931073,2932604..2932761,2933847..2933995,2935019..2935131,2937058..2937176,2938216..2938380,2943280..2943413,2946161..2946296,2948239..2948322,2950619..2950763,2952439..2952613,2955972..2956093,2977024..2977124,2977706..2977768,3027413..3027589,3032100..3032234,3049580..3050050))
location: region:2912389-3050050:-1
so has part: feature:3049580-3050050:-1:exon
so has part: feature:3032100-3032234:-1:exon
so has part: feature:3027413-3027589:-1:exon
so has part: feature:2977706-2977768:-1:exon
so has part: feature:2977024-2977124:-1:exon
so has part: feature:2955972-2956093:-1:exon
so has part: feature:2952439-2952613:-1:exon
so has part: feature:2950619-2950763:-1:exon
so has part: feature:2948239-2948322:-1:exon
so has part: feature:2946161-2946296:-1:exon
so has part: feature:2943280-2943413:-1:exon
so has part: feature:2938216-2938380:-1:exon
so has part: feature:2937058-2937176:-1:exon
so has part: feature:2935019-2935131:-1:exon
so has part: feature:2933847-2933995:-1:exon
so has part: feature:2932604-2932761:-1:exon
so has part: feature:2930912-2931073:-1:exon
so has part: feature:2925624-2925733:-1:exon
so has part: feature:2924123-2924268:-1:exon
so has part: feature:2912389-2912529:-1:exon

position:2912389:-1
position: 2912389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3049580-3050050:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3032100-3032234:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3027413-3027589:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2977706-2977768:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2977024-2977124:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2955972-2956093:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2952439-2952613:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2950619-2950763:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2948239-2948322:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2946161-2946296:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2943280-2943413:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2938216-2938380:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2937058-2937176:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2935019-2935131:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2933847-2933995:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2932604-2932761:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2930912-2931073:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2925624-2925733:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2924123-2924268:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2912389-2912529:-1:exon

position:2912529:-1
position: 2912529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125465399
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465399
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate receptor ionotropic, NMDA 1 isoform X5
translation: MDRLIGLLLGFSAVFPLQSQAAPKVVNIGAVLSTKKTENIFREAVAQANRKHGTYKIQLNATAVTHKPNAIQMALAVCEDLISSQVYAILVSHPPGPSDHLTPTPVSYTAGFYRIPVIGLTTRMSIYSDKSIHLSFLRTVPPYSHQAHVWFEMMRRFRWGHIILVVSNDHEGRAAQKKLETLLEEKESKNKKRNFENNDQHSYDSRRGPKAEKVLQFEPGTTNMTSMLLEAKELEARVIILSASEDDAVTMYKTATLLNMTGSGYVWLVGEREISGRAMQHVPEGVIGLQLIDGKNETAHINDAVGIVSQSIHELFEKENITDPPKGCVGNTNIWKTGPLFKRVLLSTKYREGFTGQVEFNDEGDRKFSNYSIVNVQKGKLVQIGVYNGTDVLLNDKKIIWPGGELNTPKGFQMSTKLKIVSIYQEPFVYVKPTLPDGTCEEEYTISGDPIKKVICTGPNATVPGRPIVPQCCYGFCIDLLIKLASTPTLNFTYEVHLVHDGKFGTQERVNNSNKKEWNGMMGELLSGLGDMIVAPLTINNERAQYIEFSKPYKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYENAADAIQAVRDGKLHAFIWDSAVLEFEASQKCDLITTGELFFRSGFGIGMRKDSPWKQAVSLAILSFHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRGHALGTLVFGSNSGTLCDRGQCLPVC
SIO_010081: LOC125465399
subclass of: SO_0000673
so part of: LOC125465399
location: complement(join(2912443..2912529,2924123..2924268,2925624..2925733,2930912..2931073,2932604..2932761,2933847..2933995,2935019..2935131,2937058..2937176,2938216..2938380,2943280..2943413,2946161..2946296,2948239..2948322,2950619..2950763,2952439..2952613,2955972..2956093,2977024..2977124,2977706..2977768,3027413..3027589,3032100..3032234,3049580..3049834))
location: region:2912443-3049834:-1
so has part: feature:3049580-3049834:-1:exon
so has part: feature:3032100-3032234:-1:exon
so has part: feature:3027413-3027589:-1:exon
so has part: feature:2977706-2977768:-1:exon
so has part: feature:2977024-2977124:-1:exon
so has part: feature:2955972-2956093:-1:exon
so has part: feature:2952439-2952613:-1:exon
so has part: feature:2950619-2950763:-1:exon
so has part: feature:2948239-2948322:-1:exon
so has part: feature:2946161-2946296:-1:exon
so has part: feature:2943280-2943413:-1:exon
so has part: feature:2938216-2938380:-1:exon
so has part: feature:2937058-2937176:-1:exon
so has part: feature:2935019-2935131:-1:exon
so has part: feature:2933847-2933995:-1:exon
so has part: feature:2932604-2932761:-1:exon
so has part: feature:2930912-2931073:-1:exon
so has part: feature:2925624-2925733:-1:exon
so has part: feature:2924123-2924268:-1:exon
so has part: feature:2912443-2912529:-1:exon

XP_048414802.1
type: Protein
SIO_000068: ncbiprotein

position:2912443:-1
position: 2912443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3049580-3049834:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3032100-3032234:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3027413-3027589:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2977706-2977768:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2977024-2977124:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2955972-2956093:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2952439-2952613:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2950619-2950763:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2948239-2948322:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2946161-2946296:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2943280-2943413:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2938216-2938380:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2937058-2937176:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2935019-2935131:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2933847-2933995:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2932604-2932761:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2930912-2931073:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2925624-2925733:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2924123-2924268:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2912443-2912529:-1:exon

LOC125465399
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465399
product: glutamate receptor ionotropic, NMDA 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048558848.1
SIO_010081: LOC125465399
subclass of: SO_0000673
so part of: LOC125465399
location: complement(join(2921555..2921578,2924123..2924268,2925624..2925733,2930912..2931073,2932604..2932761,2933847..2933995,2935019..2935131,2937058..2937176,2938216..2938380,2943280..2943413,2946161..2946296,2948239..2948322,2950619..2950763,2952439..2952613,2955972..2956093,2977024..2977124,2977706..2977768,3027413..3027589,3032100..3032234,3049580..3050050))
location: region:2921555-3050050:-1
so has part: feature:3049580-3050050:-1:exon
so has part: feature:3032100-3032234:-1:exon
so has part: feature:3027413-3027589:-1:exon
so has part: feature:2977706-2977768:-1:exon
so has part: feature:2977024-2977124:-1:exon
so has part: feature:2955972-2956093:-1:exon
so has part: feature:2952439-2952613:-1:exon
so has part: feature:2950619-2950763:-1:exon
so has part: feature:2948239-2948322:-1:exon
so has part: feature:2946161-2946296:-1:exon
so has part: feature:2943280-2943413:-1:exon
so has part: feature:2938216-2938380:-1:exon
so has part: feature:2937058-2937176:-1:exon
so has part: feature:2935019-2935131:-1:exon
so has part: feature:2933847-2933995:-1:exon
so has part: feature:2932604-2932761:-1:exon
so has part: feature:2930912-2931073:-1:exon
so has part: feature:2925624-2925733:-1:exon
so has part: feature:2924123-2924268:-1:exon
so has part: feature:2921555-2921578:-1:exon

position:2921555:-1
position: 2921555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3049580-3050050:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3032100-3032234:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3027413-3027589:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2977706-2977768:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2977024-2977124:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2955972-2956093:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2952439-2952613:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2950619-2950763:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2948239-2948322:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2946161-2946296:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2943280-2943413:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2938216-2938380:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2937058-2937176:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2935019-2935131:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2933847-2933995:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2932604-2932761:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2930912-2931073:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2925624-2925733:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2924123-2924268:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2921555-2921578:-1:exon

position:2921578:-1
position: 2921578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125465399
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465399
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate receptor ionotropic, NMDA 1 isoform X8
translation: MDRLIGLLLGFSAVFPLQSQAAPKVVNIGAVLSTKKTENIFREAVAQANRKHGTYKIQLNATAVTHKPNAIQMALAVCEDLISSQVYAILVSHPPGPSDHLTPTPVSYTAGFYRIPVIGLTTRMSIYSDKSIHLSFLRTVPPYSHQAHVWFEMMRRFRWGHIILVVSNDHEGRAAQKKLETLLEEKESKNKKRNFENNDQHSYDSRRGPKAEKVLQFEPGTTNMTSMLLEAKELEARVIILSASEDDAVTMYKTATLLNMTGSGYVWLVGEREISGRAMQHVPEGVIGLQLIDGKNETAHINDAVGIVSQSIHELFEKENITDPPKGCVGNTNIWKTGPLFKRVLLSTKYREGFTGQVEFNDEGDRKFSNYSIVNVQKGKLVQIGVYNGTDVLLNDKKIIWPGGELNTPKGFQMSTKLKIVSIYQEPFVYVKPTLPDGTCEEEYTISGDPIKKVICTGPNATVPGRPIVPQCCYGFCIDLLIKLASTPTLNFTYEVHLVHDGKFGTQERVNNSNKKEWNGMMGELLSGLGDMIVAPLTINNERAQYIEFSKPYKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYENAADAIQAVRDGKLHAFIWDSAVLEFEASQKCDLITTGELFFRSGFGIGMRKDSPWKQAVSLAILSFHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQSP
SIO_010081: LOC125465399
subclass of: SO_0000673
so part of: LOC125465399
location: complement(join(2921570..2921578,2924123..2924268,2925624..2925733,2930912..2931073,2932604..2932761,2933847..2933995,2935019..2935131,2937058..2937176,2938216..2938380,2943280..2943413,2946161..2946296,2948239..2948322,2950619..2950763,2952439..2952613,2955972..2956093,2977024..2977124,2977706..2977768,3027413..3027589,3032100..3032234,3049580..3049834))
location: region:2921570-3049834:-1
so has part: feature:3049580-3049834:-1:exon
so has part: feature:3032100-3032234:-1:exon
so has part: feature:3027413-3027589:-1:exon
so has part: feature:2977706-2977768:-1:exon
so has part: feature:2977024-2977124:-1:exon
so has part: feature:2955972-2956093:-1:exon
so has part: feature:2952439-2952613:-1:exon
so has part: feature:2950619-2950763:-1:exon
so has part: feature:2948239-2948322:-1:exon
so has part: feature:2946161-2946296:-1:exon
so has part: feature:2943280-2943413:-1:exon
so has part: feature:2938216-2938380:-1:exon
so has part: feature:2937058-2937176:-1:exon
so has part: feature:2935019-2935131:-1:exon
so has part: feature:2933847-2933995:-1:exon
so has part: feature:2932604-2932761:-1:exon
so has part: feature:2930912-2931073:-1:exon
so has part: feature:2925624-2925733:-1:exon
so has part: feature:2924123-2924268:-1:exon
so has part: feature:2921570-2921578:-1:exon

XP_048414805.1
type: Protein
SIO_000068: ncbiprotein

position:2921570:-1
position: 2921570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3049580-3049834:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3032100-3032234:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3027413-3027589:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2977706-2977768:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2977024-2977124:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2955972-2956093:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2952439-2952613:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2950619-2950763:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2948239-2948322:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2946161-2946296:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2943280-2943413:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2938216-2938380:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2937058-2937176:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2935019-2935131:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2933847-2933995:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2932604-2932761:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2930912-2931073:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2925624-2925733:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2924123-2924268:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2921570-2921578:-1:exon

zgc:92275
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: zgc:92275
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3090691..3152065
location: region:3090691-3152065:1
so has part: feature:3090691-3152065:1:exon
subclass of: SO_0000010

125465247
type: Gene
SIO_000068: ncbigene

position:3090691:1
position: 3090691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3152065:1
position: 3152065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3090691-3152065:1:exon

zgc:92275
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: zgc:92275
product: cholesterol 7-desaturase nvd
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048558524.1
SIO_010081: zgc:92275
subclass of: SO_0000673
so part of: zgc:92275
location: join(3090691..3090783,3092599..3092995,3142415..3142603,3142928..3143106,3144900..3145025,3146727..3146846,3148208..3148384,3150539..3152065)
location: region:3090691-3152065:1
so has part: feature:3090691-3090783:1:exon
so has part: feature:3092599-3092995:1:exon
so has part: feature:3142415-3142603:1:exon
so has part: feature:3142928-3143106:1:exon
so has part: feature:3144900-3145025:1:exon
so has part: feature:3146727-3146846:1:exon
so has part: feature:3148208-3148384:1:exon
so has part: feature:3150539-3152065:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3090691-3090783:1:exon

position:3090783:1
position: 3090783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3092599-3092995:1:exon

position:3092599:1
position: 3092599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3092995:1
position: 3092995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3142415-3142603:1:exon

position:3142415:1
position: 3142415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3142603:1
position: 3142603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3142928-3143106:1:exon

position:3142928:1
position: 3142928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3143106:1
position: 3143106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3144900-3145025:1:exon

position:3144900:1
position: 3144900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3145025:1
position: 3145025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3146727-3146846:1:exon

position:3146727:1
position: 3146727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3146846:1
position: 3146846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3148208-3148384:1:exon

position:3148208:1
position: 3148208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3148384:1
position: 3148384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3150539-3152065:1:exon

position:3150539:1
position: 3150539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

zgc:92275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: zgc:92275
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cholesterol 7-desaturase nvd
translation: MDDPSWPLAMDPSITDTGLQPIRFTISCQAMLSLGGAGRWRLWKLLAPGPGPRDQALLAMLLELGSGWLSARLPGLLPALPLLLLVLAVLLALRLCFTPLQLLRAPHQVGYIPEPGTSKSQAANQVRRRRKRGELPPVYPNGWYRLLGSEELRHGQVKNITIFGEQVAVYRGQDGQVHVVDAYCPHLGANLAVGGRVMGNCIECPFHGWQFRGEDGKCVKIPYAEKVPDFAKIKIWPSCELNCAVFVWFHCDGIDPSWSIPEQEEIQSGEWVYRGRTEHYVNCHIQEIPENAADIAHLSHLHTPNMLSGADLRYTRAKLWGFAQHDWKVEWHPEPEPTKHCSRMLVNHSLRVLGWHCSLLDVHVVARQVGPGIVYMLFNHSFLGRGVILHCVTPLEPLLQRVSHRIYYQANIPPIVPKFILKAECIQFERDVMIWNNKKYISKPLLVKEDSAIARHRRWYAQFYSAKSPRLTVRHDDLEW
SIO_010081: zgc:92275
subclass of: SO_0000673
so part of: zgc:92275
location: join(3090691..3090783,3092599..3092995,3142415..3142603,3142928..3143106,3144900..3145025,3146727..3146846,3148208..3148384,3150539..3150700)
location: region:3090691-3150700:1
so has part: feature:3090691-3090783:1:exon
so has part: feature:3092599-3092995:1:exon
so has part: feature:3142415-3142603:1:exon
so has part: feature:3142928-3143106:1:exon
so has part: feature:3144900-3145025:1:exon
so has part: feature:3146727-3146846:1:exon
so has part: feature:3148208-3148384:1:exon
so has part: feature:3150539-3150700:1:exon

XP_048414481.1
type: Protein
SIO_000068: ncbiprotein

position:3150700:1
position: 3150700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3090691-3090783:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3092599-3092995:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3142415-3142603:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3142928-3143106:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3144900-3145025:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3146727-3146846:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3148208-3148384:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3150539-3150700:1:exon

LOC125465326
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125465326
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3160620..3433815)
location: region:3160620-3433815:-1
so has part: feature:3160620-3433815:-1:exon
subclass of: SO_0000010

125465326
type: Gene
SIO_000068: ncbigene

position:3160620:-1
position: 3160620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3433815:-1
position: 3433815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3160620-3433815:-1:exon

LOC125465326
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465326
product: tetratricopeptide repeat protein 28-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048558654.1
SIO_010081: LOC125465326
subclass of: SO_0000673
so part of: LOC125465326
location: complement(join(3160620..3162712,3164291..3164488,3170988..3171690,3175712..3175869,3191595..3191680,3193438..3193713,3201368..3201505,3204387..3204553,3212751..3212898,3369113..3369334,3378003..3378222,3379290..3379456,3381780..3381915,3396362..3396547,3399419..3400495,3403993..3404164,3409412..3409563,3411018..3411268,3414685..3414865,3417504..3417713,3425464..3425570,3426777..3426900,3433062..3433174,3433747..3433815))
location: region:3160620-3433815:-1
so has part: feature:3433747-3433815:-1:exon
so has part: feature:3433062-3433174:-1:exon
so has part: feature:3426777-3426900:-1:exon
so has part: feature:3425464-3425570:-1:exon
so has part: feature:3417504-3417713:-1:exon
so has part: feature:3414685-3414865:-1:exon
so has part: feature:3411018-3411268:-1:exon
so has part: feature:3409412-3409563:-1:exon
so has part: feature:3403993-3404164:-1:exon
so has part: feature:3399419-3400495:-1:exon
so has part: feature:3396362-3396547:-1:exon
so has part: feature:3381780-3381915:-1:exon
so has part: feature:3379290-3379456:-1:exon
so has part: feature:3378003-3378222:-1:exon
so has part: feature:3369113-3369334:-1:exon
so has part: feature:3212751-3212898:-1:exon
so has part: feature:3204387-3204553:-1:exon
so has part: feature:3201368-3201505:-1:exon
so has part: feature:3193438-3193713:-1:exon
so has part: feature:3191595-3191680:-1:exon
so has part: feature:3175712-3175869:-1:exon
so has part: feature:3170988-3171690:-1:exon
so has part: feature:3164291-3164488:-1:exon
so has part: feature:3160620-3162712:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3433747-3433815:-1:exon

position:3433747:-1
position: 3433747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3433062-3433174:-1:exon

position:3433062:-1
position: 3433062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3433174:-1
position: 3433174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3426777-3426900:-1:exon

position:3426777:-1
position: 3426777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3426900:-1
position: 3426900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3425464-3425570:-1:exon

position:3425464:-1
position: 3425464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3425570:-1
position: 3425570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3417504-3417713:-1:exon

position:3417504:-1
position: 3417504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3417713:-1
position: 3417713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3414685-3414865:-1:exon

position:3414685:-1
position: 3414685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3414865:-1
position: 3414865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3411018-3411268:-1:exon

position:3411018:-1
position: 3411018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3411268:-1
position: 3411268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3409412-3409563:-1:exon

position:3409412:-1
position: 3409412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3409563:-1
position: 3409563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3403993-3404164:-1:exon

position:3403993:-1
position: 3403993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3404164:-1
position: 3404164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3399419-3400495:-1:exon

position:3399419:-1
position: 3399419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3400495:-1
position: 3400495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3396362-3396547:-1:exon

position:3396362:-1
position: 3396362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3396547:-1
position: 3396547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3381780-3381915:-1:exon

position:3381780:-1
position: 3381780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3381915:-1
position: 3381915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3379290-3379456:-1:exon

position:3379290:-1
position: 3379290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3379456:-1
position: 3379456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3378003-3378222:-1:exon

position:3378003:-1
position: 3378003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3378222:-1
position: 3378222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3369113-3369334:-1:exon

position:3369113:-1
position: 3369113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3369334:-1
position: 3369334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3212751-3212898:-1:exon

position:3212751:-1
position: 3212751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3212898:-1
position: 3212898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3204387-3204553:-1:exon

position:3204387:-1
position: 3204387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3204553:-1
position: 3204553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3201368-3201505:-1:exon

position:3201368:-1
position: 3201368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3201505:-1
position: 3201505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3193438-3193713:-1:exon

position:3193438:-1
position: 3193438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3193713:-1
position: 3193713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3191595-3191680:-1:exon

position:3191595:-1
position: 3191595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3191680:-1
position: 3191680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3175712-3175869:-1:exon

position:3175712:-1
position: 3175712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3175869:-1
position: 3175869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3170988-3171690:-1:exon

position:3170988:-1
position: 3170988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3171690:-1
position: 3171690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3164291-3164488:-1:exon

position:3164291:-1
position: 3164291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3164488:-1
position: 3164488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3160620-3162712:-1:exon

position:3162712:-1
position: 3162712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125465328
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125465328
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3162303..3172080
location: region:3162303-3172080:1
so has part: feature:3162303-3172080:1:exon
subclass of: SO_0000011

125465328
type: Gene
SIO_000068: ncbigene

position:3162303:1
position: 3162303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3172080:1
position: 3172080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3162303-3172080:1:exon

LOC125465328
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 378071
nc RNA class: lncRNA
gene: LOC125465328
product: uncharacterized LOC125465328
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_007250224.1
SIO_010081: LOC125465328
subclass of: SO_0000673
so part of: LOC125465328
location: join(3162303..3162763,3169919..3169982,3170924..3172080)
location: region:3162303-3172080:1
so has part: feature:3162303-3162763:1:exon
so has part: feature:3169919-3169982:1:exon
so has part: feature:3170924-3172080:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3162303-3162763:1:exon

position:3162763:1
position: 3162763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3169919-3169982:1:exon

position:3169919:1
position: 3169919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3169982:1
position: 3169982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3170924-3172080:1:exon

position:3170924:1
position: 3170924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125465326
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465326
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 28-like
translation: MSLNNDQSIPTRNPVPNPEATSTDAMTDSQKVACLQAQGDDALRKENYEEAVHYYTQGLMLDAKDCQLLSCRALAFIQMKQYEAAKLDGEFLIQIRPEAPQNHYLLSLANRYLGHTQKAFHSLLRCLELDSMHRNEIVKDLYKATKSLCKVETHDKCCEEKGLEELLLKIGYLLCDAALHELCIQLVSSAVQLCQSTMSDLIRMQFHLIHANCYSAINNKDLAKTAYENCLKLAVKLRSTQEHIKCCAGLAEVHMTAGRPEHAIRYYLELLAILEHNEQEARDQYSGYERHALSIREFWSSERQVMVYLNLTKAYWIIQQHHKALVFGKKYLEHLIGGPPTGYCQDVTSAYHQVAKLQEKLGLYNESVINYQQYCELSKMLGNSTAAAEAHGAMGVIHTVLGNYDLAVTHTHQSFNLSKSIGERQLRLAAMIRLGDIYRTTDNIEEAVNWYQQAWDHDCRGDDPKLKCQAALGLAEVYKDTAQYRHALYFYEQALEAAELAGEDEWIYKCKFKIACSCQYSYLAKELMKGFNAFKEVIAYYCWLSRRFIVEGITLPKETNDILLESYDGIQSILEKLGDSLKVFQYAEAGRRHRFLTYTFMIEEPPVWNSMMDEPSMSFIPSIEELYRILDLLSGPVLYYSLVDTGLYLWVLKAKEGLVHFHATSSAVSETIHSQICQFLQLVKNKSLLYETEARNIPKRRLRQTTVGKRNKRKRVPRSSCKDSPTTERLLEGEEEIEHWKQMYLLLFGPVTELMEELPEGSDLLIVPDKHLIQVPFANLPDLKNKKLGERFCVTLAPSLFAIEIVANLIKNPVTNKEERPATTMAMLEQMGGPHHELYGLQKLGLMDTVNHLVNCTSTNTIVARSPYFIPPFKQILSKSQALVVGSPHFSSPLSLWGRVWKPWGPLIGAQKEVIKVAEYLQTEAVMGEEATKKLVLSQLPHMTIVHIATYGSWEDGVLVFTPHPPPVAGELVEERSYLLTIPEILELKLKAKIVVLSSCGDGGTNQDPVVPLELPTAFLRAGATSVLIQIKPVPVQALLTFYHHFYIALWSGSYISGAMEYAKYQMQNDTRFGRYWCNFVLLGLDTFVNLLDVKHDMLHWTMEKAEEDVAQSTKQDWLNPAVYTPPDQEALLLEMQKSLEELIVNQGSMSSVLKLLHLLMTEAIKRLSPTNADNVTVKLTANIIGIPGVSSMLNLLGFRFQSLAPEPSKMGDRTFLACEQAAMGDVLTHSTLPVSHAHPVAVIFPHWNPDRLLGIAQQAIAALIDLSACSQCVNALIWILPLTCERLEQLINLLEKCRSPPTVCPKLMEKEVASLWSQPHLRDFLQVIGYEQAGRYLFHNPRDLNKSLLLGSLNLFLALRPQPIQSLSKPDPQQHSSDSVREQQSGGGKPETVTQGEEQSRGGKPEAVTEGKEQSGEDQQQTASQIEEQSRESQKESSVDTQRDEDTRQGSQESLIKTRRDKKTKQGSLRNLIDTRRDKKTRQGSLGSSIDTGREKKIRHSSQNATLAKIKKNRQRHPETTTTRNKRTKCGVQEASGLSDKQADRDTQQTAADHERTKYPPEKPKVCLNTLKPLLVLRHQIMMQAPWLTVNPTSEEVRVKQDLANRLNCLHSQQKAEVHRVEMWHRKALTELEKKPEKPAIKRQVNDGCPKKAKVKGPRTPSTVQIPFDTSTATPQNVALRSSAQEIIKEQEENVRQRHRAAVKDLFLPFIEPLP
SIO_010081: LOC125465326
subclass of: SO_0000673
so part of: LOC125465326
location: complement(join(3162503..3162712,3164291..3164488,3170988..3171690,3175712..3175869,3191595..3191680,3193438..3193713,3201368..3201505,3204387..3204553,3212751..3212898,3369113..3369334,3378003..3378222,3379290..3379456,3381780..3381915,3396362..3396547,3399419..3400495,3403993..3404164,3409412..3409563,3411018..3411268,3414685..3414865,3417504..3417713,3425464..3425556))
location: region:3162503-3425556:-1
so has part: feature:3425464-3425556:-1:exon
so has part: feature:3417504-3417713:-1:exon
so has part: feature:3414685-3414865:-1:exon
so has part: feature:3411018-3411268:-1:exon
so has part: feature:3409412-3409563:-1:exon
so has part: feature:3403993-3404164:-1:exon
so has part: feature:3399419-3400495:-1:exon
so has part: feature:3396362-3396547:-1:exon
so has part: feature:3381780-3381915:-1:exon
so has part: feature:3379290-3379456:-1:exon
so has part: feature:3378003-3378222:-1:exon
so has part: feature:3369113-3369334:-1:exon
so has part: feature:3212751-3212898:-1:exon
so has part: feature:3204387-3204553:-1:exon
so has part: feature:3201368-3201505:-1:exon
so has part: feature:3193438-3193713:-1:exon
so has part: feature:3191595-3191680:-1:exon
so has part: feature:3175712-3175869:-1:exon
so has part: feature:3170988-3171690:-1:exon
so has part: feature:3164291-3164488:-1:exon
so has part: feature:3162503-3162712:-1:exon

XP_048414611.1
type: Protein
SIO_000068: ncbiprotein

position:3162503:-1
position: 3162503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3425556:-1
position: 3425556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3425464-3425556:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3417504-3417713:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3414685-3414865:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3411018-3411268:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3409412-3409563:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3403993-3404164:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3399419-3400495:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3396362-3396547:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3381780-3381915:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3379290-3379456:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3378003-3378222:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3369113-3369334:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3212751-3212898:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3204387-3204553:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3201368-3201505:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3193438-3193713:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3191595-3191680:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3175712-3175869:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3170988-3171690:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3164291-3164488:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3162503-3162712:-1:exon

rnf208
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: rnf208
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3263653..3266446)
location: region:3263653-3266446:-1
so has part: feature:3263653-3266446:-1:exon
subclass of: SO_0000010

125465327
type: Gene
SIO_000068: ncbigene

position:3263653:-1
position: 3263653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3266446:-1
position: 3266446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3263653-3266446:-1:exon

rnf208
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: rnf208
product: ring finger protein 208
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558655.1
SIO_010081: rnf208
subclass of: SO_0000673
so part of: rnf208
location: complement(3263653..3266446)
location: region:3263653-3266446:-1
so has part: feature:3263653-3266446:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3263653-3266446:-1:exon

rnf208
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: rnf208
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RING finger protein 208
translation: MACLKQQQAAIKMEAVKIVPVEKFAECSSSQGRYGPSQCVREPPLVGKCAWPLESEIIANQACADVPTLEKARSPSGLARTPPRREKFVQGHRKASAELCYHRQTPSDEVIVNQYVLHQSTTSEPLECPTCGHVYNATNKRPRILSCLHSVCEECLQILYESCPKYKFISCPTCRRETVLFTDYGLAALAINTSILARLPAEGLTANPGQWGSEADRSCYQTFQQYCGAACSCQLRNPLSSCVIM
SIO_010081: rnf208
subclass of: SO_0000673
so part of: rnf208
location: complement(3264782..3265519)
location: region:3264782-3265519:-1
so has part: feature:3264782-3265519:-1:exon

XP_048414612.1
type: Protein
SIO_000068: ncbiprotein

position:3264782:-1
position: 3264782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3265519:-1
position: 3265519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3264782-3265519:-1:exon

LOC125465513
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125465513
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3589610..3609533
location: region:3589610-3609533:1
so has part: feature:3589610-3609533:1:exon
subclass of: SO_0000010

125465513
type: Gene
SIO_000068: ncbigene

position:3589610:1
position: 3589610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3609533:1
position: 3609533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3589610-3609533:1:exon

LOC125465513
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465513
product: torsin-4A-A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_048559126.1
SIO_010081: LOC125465513
subclass of: SO_0000673
so part of: LOC125465513
location: join(3589610..3589835,3603157..3603288,3607184..3609533)
location: region:3589610-3609533:1
so has part: feature:3589610-3589835:1:exon
so has part: feature:3603157-3603288:1:exon
so has part: feature:3607184-3609533:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3589610-3589835:1:exon

position:3589835:1
position: 3589835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3603157-3603288:1:exon

position:3603157:1
position: 3603157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3603288:1
position: 3603288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3607184-3609533:1:exon

position:3607184:1
position: 3607184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125465513
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465513
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: torsin-4A-A-like
translation: MDMEATTPMMEAAPKGLLGSKHRISTVTSPLRAACRIRHKYLVMKRRRVSMEQSEAAGDEGPGGRAPTRYLPTKGQDLLDRAFKHRAKSAEHFTFEKLPVKTMKRKRSNKKRKVLYPSDTRKYLPEEKKSKAKNCLFLLSLIVFFQIYNAIENLDDNVLKYDLAGLEKTLKRDVFGQTEAINTLMELLRDYLATHIHNKPLVLSFNGPSGVGKSLVGRLLAKHFRSVLSNELVLQYFVLHHCPDQDNGTSCLQELAGRIANMVSQAEEEEKIPLLIFDEVEFMRPALLDFLQAYLQPHQPNEFLNAVYVLISNYGQGEITRFVLQNASSGLARELTRLEELLFNVQSSLSQFHPIWNHAEIIPFTLLERIHIEGCFLEAMMREGHYPDTTQLNDLSRELNYYSAGSRQYSIHGCKYVGSRVSLLH
SIO_010081: LOC125465513
subclass of: SO_0000673
so part of: LOC125465513
location: 3607221..3608498
location: region:3607221-3608498:1
so has part: feature:3607221-3608498:1:exon

XP_048415083.1
type: Protein
SIO_000068: ncbiprotein

position:3607221:1
position: 3607221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3608498:1
position: 3608498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3607221-3608498:1:exon

ddr2l
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: ddr2l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3737472..3776646
location: region:3737472-3776646:1
so has part: feature:3737472-3776646:1:exon
subclass of: SO_0000010

125465473
type: Gene
SIO_000068: ncbigene

position:3737472:1
position: 3737472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3776646:1
position: 3776646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3737472-3776646:1:exon

ddr2l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: ddr2l
product: discoidin domain receptor family, member 2, like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048559063.1
SIO_010081: ddr2l
subclass of: SO_0000673
so part of: ddr2l
location: join(3737472..3737751,3737856..3737993,3742509..3742611,3750731..3750959,3755509..3755656,3756170..3756275,3756699..3756885,3761572..3761827,3762952..3763158,3763681..3763838,3766118..3766316,3768470..3768714,3769132..3769256,3770246..3770443,3772655..3772889,3773551..3773700,3774227..3776646)
location: region:3737472-3776646:1
so has part: feature:3737472-3737751:1:exon
so has part: feature:3737856-3737993:1:exon
so has part: feature:3742509-3742611:1:exon
so has part: feature:3750731-3750959:1:exon
so has part: feature:3755509-3755656:1:exon
so has part: feature:3756170-3756275:1:exon
so has part: feature:3756699-3756885:1:exon
so has part: feature:3761572-3761827:1:exon
so has part: feature:3762952-3763158:1:exon
so has part: feature:3763681-3763838:1:exon
so has part: feature:3766118-3766316:1:exon
so has part: feature:3768470-3768714:1:exon
so has part: feature:3769132-3769256:1:exon
so has part: feature:3770246-3770443:1:exon
so has part: feature:3772655-3772889:1:exon
so has part: feature:3773551-3773700:1:exon
so has part: feature:3774227-3776646:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3737472-3737751:1:exon

position:3737751:1
position: 3737751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3737856-3737993:1:exon

position:3737856:1
position: 3737856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3737993:1
position: 3737993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3742509-3742611:1:exon

position:3742509:1
position: 3742509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3742611:1
position: 3742611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3750731-3750959:1:exon

position:3750731:1
position: 3750731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3750959:1
position: 3750959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3755509-3755656:1:exon

position:3755509:1
position: 3755509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3755656:1
position: 3755656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3756170-3756275:1:exon

position:3756170:1
position: 3756170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3756275:1
position: 3756275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3756699-3756885:1:exon

position:3756699:1
position: 3756699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3756885:1
position: 3756885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3761572-3761827:1:exon

position:3761572:1
position: 3761572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3761827:1
position: 3761827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3762952-3763158:1:exon

position:3762952:1
position: 3762952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3763158:1
position: 3763158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3763681-3763838:1:exon

position:3763681:1
position: 3763681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3763838:1
position: 3763838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3766118-3766316:1:exon

position:3766118:1
position: 3766118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3766316:1
position: 3766316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3768470-3768714:1:exon

position:3768470:1
position: 3768470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3768714:1
position: 3768714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3769132-3769256:1:exon

position:3769132:1
position: 3769132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3769256:1
position: 3769256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3770246-3770443:1:exon

position:3770246:1
position: 3770246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3770443:1
position: 3770443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3772655-3772889:1:exon

position:3772655:1
position: 3772655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3772889:1
position: 3772889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3773551-3773700:1:exon

position:3773551:1
position: 3773551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3773700:1
position: 3773700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3774227-3776646:1:exon

position:3774227:1
position: 3774227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ddr2l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: ddr2l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: discoidin domain-containing receptor 2
translation: MLWCFLLMLQYPGNSKAQVNPGLCRYALGMQDGTIADEDITASSEWYGSTAARFGRLEKEQGDGAWCPVDLLYPDSVEYLQIDLHALTFITLLGTQGRHAYGSGNEFARAYQLDYSRDGRRWITWKDRQGKQIIPGNVNTYDIVLKDLRPPIIARYVRVIPVTEQPSSVCMRVELYGCVWADGLCSYSGPVGQTIEKPGTAVVYLNDSTYDGVQDSKRSHSGLGQLTDGVLGLDDFTQSHEYRVWPGYDYVGWSNETFAGQYVELEFEFDQRRNFSSMKVHSNNLYTKSVKIFHRVECYFKQQLVANWERESVGVTTVMDDKNPSARFVVVPLGQRLGKAIRCRFYFADRWMLFSEISFQSTVADVGAANPLEHPQPSWREGTSQIPVDLTTPKPNAGLDLGSGPSPSPTLSMSSSLSPTLSDTVNSFVTLTLGSSPPHNISRPINRVEDSNTSILIGCLVTIILLLLLIIIVILWTQHWKRILEKAPRRILEEDATVRPSLCNDTIVISNQTQIFQTNPTYERVFPFDLEYQEPARLLRKLPELSQSAEDSVCSGDYAEPDLTKTTPHQGFQSNVPHYAEADIVNLQGVTGNNTYAVPALTVDSLVKMELAVEEISRHQLHFKEKLGEGQFGEVHLCEALSLHEFISPDFLFNTGHRPVLVAVKMLRSDATTSARNNFLKEMKIMSRLKDPNIIRLLGICIRDDPLCMVTEYMENGDLNQFLSQRELENHFTLAKNIPSVSYRCLLHMMTQVSSGMKYLSSLNVVHRDLATRNCLVGNRCTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTMWEMFTFCKEQPYSQQSDEQIIENTGEFFRNQGRQIYLSQPTVCPKQIFDLMLLCWSRDIKDRPSFQQIHHFLQQQFVNAA
SIO_010081: ddr2l
subclass of: SO_0000673
so part of: ddr2l
location: join(3737930..3737993,3742509..3742611,3750731..3750959,3755509..3755656,3756170..3756275,3756699..3756885,3761572..3761827,3762952..3763158,3763681..3763838,3766118..3766316,3768470..3768714,3769132..3769256,3770246..3770443,3772655..3772889,3773551..3773700,3774227..3774367)
location: region:3737930-3774367:1
so has part: feature:3737930-3737993:1:exon
so has part: feature:3742509-3742611:1:exon
so has part: feature:3750731-3750959:1:exon
so has part: feature:3755509-3755656:1:exon
so has part: feature:3756170-3756275:1:exon
so has part: feature:3756699-3756885:1:exon
so has part: feature:3761572-3761827:1:exon
so has part: feature:3762952-3763158:1:exon
so has part: feature:3763681-3763838:1:exon
so has part: feature:3766118-3766316:1:exon
so has part: feature:3768470-3768714:1:exon
so has part: feature:3769132-3769256:1:exon
so has part: feature:3770246-3770443:1:exon
so has part: feature:3772655-3772889:1:exon
so has part: feature:3773551-3773700:1:exon
so has part: feature:3774227-3774367:1:exon

XP_048415020.1
type: Protein
SIO_000068: ncbiprotein

position:3737930:1
position: 3737930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3774367:1
position: 3774367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3737930-3737993:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3742509-3742611:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3750731-3750959:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3755509-3755656:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3756170-3756275:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3756699-3756885:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3761572-3761827:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3762952-3763158:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3763681-3763838:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3766118-3766316:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3768470-3768714:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3769132-3769256:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3770246-3770443:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3772655-3772889:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3773551-3773700:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3774227-3774367:1:exon

LOC125465248
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125465248
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3797172..3920103
location: region:3797172-3920103:1
so has part: feature:3797172-3920103:1:exon
subclass of: SO_0000010

125465248
type: Gene
SIO_000068: ncbigene

position:3797172:1
position: 3797172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3920103:1
position: 3920103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3797172-3920103:1:exon

LOC125465248
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465248
product: uncharacterized LOC125465248
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 81% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048558525.1
SIO_010081: LOC125465248
subclass of: SO_0000673
so part of: LOC125465248
location: join(3797172..3797272,3818594..3818661,3819786..3819998,3868074..3868151,3871115..3871282,3873059..3873115,3892339..3892419,3893992..3894204,3906498..3906575,3908493..3908717,3911612..3911824,3913236..3913313,3916078..3916302,3918753..3918893,3919686..3920103)
location: region:3797172-3920103:1
so has part: feature:3797172-3797272:1:exon
so has part: feature:3818594-3818661:1:exon
so has part: feature:3819786-3819998:1:exon
so has part: feature:3868074-3868151:1:exon
so has part: feature:3871115-3871282:1:exon
so has part: feature:3873059-3873115:1:exon
so has part: feature:3892339-3892419:1:exon
so has part: feature:3893992-3894204:1:exon
so has part: feature:3906498-3906575:1:exon
so has part: feature:3908493-3908717:1:exon
so has part: feature:3911612-3911824:1:exon
so has part: feature:3913236-3913313:1:exon
so has part: feature:3916078-3916302:1:exon
so has part: feature:3918753-3918893:1:exon
so has part: feature:3919686-3920103:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3797172-3797272:1:exon

position:3797272:1
position: 3797272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3818594-3818661:1:exon

position:3818594:1
position: 3818594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3818661:1
position: 3818661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3819786-3819998:1:exon

position:3819786:1
position: 3819786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3819998:1
position: 3819998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3868074-3868151:1:exon

position:3868074:1
position: 3868074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3868151:1
position: 3868151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3871115-3871282:1:exon

position:3871115:1
position: 3871115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3871282:1
position: 3871282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3873059-3873115:1:exon

position:3873059:1
position: 3873059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3873115:1
position: 3873115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3892339-3892419:1:exon

position:3892339:1
position: 3892339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3892419:1
position: 3892419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3893992-3894204:1:exon

position:3893992:1
position: 3893992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3894204:1
position: 3894204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3906498-3906575:1:exon

position:3906498:1
position: 3906498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3906575:1
position: 3906575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3908493-3908717:1:exon

position:3908493:1
position: 3908493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3908717:1
position: 3908717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3911612-3911824:1:exon

position:3911612:1
position: 3911612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3911824:1
position: 3911824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3913236-3913313:1:exon

position:3913236:1
position: 3913236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3913313:1
position: 3913313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3916078-3916302:1:exon

position:3916078:1
position: 3916078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3916302:1
position: 3916302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3918753-3918893:1:exon

position:3918753:1
position: 3918753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3918893:1
position: 3918893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3919686-3920103:1:exon

position:3919686:1
position: 3919686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125465248
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465248
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC125465248
translation: MADEAELSTFELEALNAHNEYRRRHATPPLTYNKEMIKDCQAWADELAPRGEMEHSDTKKGENIWYKWSSGEMEFTGKDPVDAWYEEIKDYDYNNPGFAPETGHFTQLLWKDTKEMAIAYSISGQVAISVAHYSPAGNITNEGYFEANVLPLAEEPAEETSAAETEAETPAAEPASAGSPPPETAEAIGPEVATAQEAPQEDITAAKISEFEQVALESHNYYRSIHDAPPLKYSKELRDECQKWAEFLATTGIVEQSRTKNGENIWTAPQTEEISGKEPVVAWYNEITDYDFSSPGFSTLTGQFTQMIWVATTHFGIAYAKGDTGIYVVAQYSPAGNIVDQHSFQKNVLPPDSLSIDSKDKQDTGSQQTTSEDSSIEMNKFEREALNAHNAFRARHNAAPLVINKDLCKDCKVWANVLTQDGVIAQSPTNFGENIWSKPSATEGEISGYEPVEAWYAEVKYYDFEKPGLSERTEHFTQLIWKETTDMGIAYVTSDKGTFVVAQYKPRGNTIKIENFTENVLPPDPAYSQPPPEQEAPTTTPSAATIPPEPSSQPPEAAEEGAAAEPLAEAKPAEGKAAEGEAAEGREAEEKAAETAPAAPKEEKKKSHRHCTKKKDPKLKRAERSPCE
SIO_010081: LOC125465248
subclass of: SO_0000673
so part of: LOC125465248
location: join(3818646..3818661,3819786..3819998,3868074..3868151,3871115..3871282,3873059..3873115,3892339..3892419,3893992..3894204,3906498..3906575,3908493..3908717,3911612..3911824,3913236..3913313,3916078..3916302,3918753..3918893,3919686..3919786)
location: region:3818646-3919786:1
so has part: feature:3818646-3818661:1:exon
so has part: feature:3819786-3819998:1:exon
so has part: feature:3868074-3868151:1:exon
so has part: feature:3871115-3871282:1:exon
so has part: feature:3873059-3873115:1:exon
so has part: feature:3892339-3892419:1:exon
so has part: feature:3893992-3894204:1:exon
so has part: feature:3906498-3906575:1:exon
so has part: feature:3908493-3908717:1:exon
so has part: feature:3911612-3911824:1:exon
so has part: feature:3913236-3913313:1:exon
so has part: feature:3916078-3916302:1:exon
so has part: feature:3918753-3918893:1:exon
so has part: feature:3919686-3919786:1:exon

XP_048414482.1
type: Protein
SIO_000068: ncbiprotein

position:3818646:1
position: 3818646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3919786:1
position: 3919786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3818646-3818661:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3819786-3819998:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3868074-3868151:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3871115-3871282:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3873059-3873115:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3892339-3892419:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3893992-3894204:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3906498-3906575:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3908493-3908717:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3911612-3911824:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3913236-3913313:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3916078-3916302:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3918753-3918893:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3919686-3919786:1:exon

glipr2
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: glipr2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3941322..3992433
location: region:3941322-3992433:1
so has part: feature:3941322-3992433:1:exon
subclass of: SO_0000010

125465229
type: Gene
SIO_000068: ncbigene

position:3941322:1
position: 3941322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3992433:1
position: 3992433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3941322-3992433:1:exon

glipr2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: glipr2
product: GLI pathogenesis-related 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048558482.1
SIO_010081: glipr2
subclass of: SO_0000673
so part of: glipr2
location: join(3941322..3941369,3941788..3941915,3957930..3957994,3959823..3960032,3967774..3967851,3971591..3971791,3973607..3973816,3977181..3977258,3979148..3979387,3983196..3983414,3986692..3986769,3991976..3992433)
location: region:3941322-3992433:1
so has part: feature:3941322-3941369:1:exon
so has part: feature:3941788-3941915:1:exon
so has part: feature:3957930-3957994:1:exon
so has part: feature:3959823-3960032:1:exon
so has part: feature:3967774-3967851:1:exon
so has part: feature:3971591-3971791:1:exon
so has part: feature:3973607-3973816:1:exon
so has part: feature:3977181-3977258:1:exon
so has part: feature:3979148-3979387:1:exon
so has part: feature:3983196-3983414:1:exon
so has part: feature:3986692-3986769:1:exon
so has part: feature:3991976-3992433:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3941322-3941369:1:exon

position:3941369:1
position: 3941369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3941788-3941915:1:exon

position:3941788:1
position: 3941788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3941915:1
position: 3941915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3957930-3957994:1:exon

position:3957930:1
position: 3957930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3957994:1
position: 3957994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3959823-3960032:1:exon

position:3959823:1
position: 3959823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3960032:1
position: 3960032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3967774-3967851:1:exon

position:3967774:1
position: 3967774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3967851:1
position: 3967851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3971591-3971791:1:exon

position:3971591:1
position: 3971591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3971791:1
position: 3971791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3973607-3973816:1:exon

position:3973607:1
position: 3973607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3973816:1
position: 3973816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3977181-3977258:1:exon

position:3977181:1
position: 3977181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3977258:1
position: 3977258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3979148-3979387:1:exon

position:3979148:1
position: 3979148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3979387:1
position: 3979387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3983196-3983414:1:exon

position:3983196:1
position: 3983196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3983414:1
position: 3983414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3986692-3986769:1:exon

position:3986692:1
position: 3986692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3986769:1
position: 3986769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3991976-3992433:1:exon

position:3991976:1
position: 3991976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

glipr2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: glipr2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein glipr2 isoform X1
translation: MSECLLYFCIEFRRLIRKHLCQSVSAISVSAVPLLFPSRDRNTHCRIFTTYQRRLFLRGFRKIRISMASRDSNRAGEHFAAQLLKSVNEYRAKHGAGPLTLNTAMSEKAEKWAKYLVASRTLKHSDTTYGENIWCQQGSGSVQVTGKEVADSWYNEVKKYNFSSPGFQKNCGHFTQLVWRESKEMGAGLASDGKGLTIVVAQFDPAGNITNPGYFAENVLPVGCKVEDNESGSAQGDGGEHFAAQLLKSVNEYRVKHGAGPLTLNTAMSEKAEKWAKYLVTSRTLKHSDTSYGENIWCQQGSGSVQATGKDVADSWYNEIKNYDFSSPGFQKNCGHFTQLVWRESKEMGAGLASDGKGLTIVVAQFDPAGNITNPGYFAKNVLPVGSKVEEVEGGSAQGGSGKAPETGHMAPLPDKGIKAFQAELLQEHNRLRTLHQSQPLQLNSDLSKQAQKWADHLIEINQLRHSNTEYGENLWYKWSSETKPPTGAEVSESWYNEIKKYNFSSPGFKSGTGHFTQMVWKESREMGAGCATDGKGMFMVVAVYNPPGNITNPGYFEKNVLPPS
SIO_010081: glipr2
subclass of: SO_0000673
so part of: glipr2
location: join(3941337..3941369,3941788..3941915,3957930..3957994,3959823..3960032,3967774..3967851,3971591..3971791,3973607..3973816,3977181..3977258,3979148..3979387,3983196..3983414,3986692..3986769,3991976..3992133)
location: region:3941337-3992133:1
so has part: feature:3941337-3941369:1:exon
so has part: feature:3941788-3941915:1:exon
so has part: feature:3957930-3957994:1:exon
so has part: feature:3959823-3960032:1:exon
so has part: feature:3967774-3967851:1:exon
so has part: feature:3971591-3971791:1:exon
so has part: feature:3973607-3973816:1:exon
so has part: feature:3977181-3977258:1:exon
so has part: feature:3979148-3979387:1:exon
so has part: feature:3983196-3983414:1:exon
so has part: feature:3986692-3986769:1:exon
so has part: feature:3991976-3992133:1:exon

XP_048414439.1
type: Protein
SIO_000068: ncbiprotein

position:3941337:1
position: 3941337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3992133:1
position: 3992133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3941337-3941369:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3941788-3941915:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3957930-3957994:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3959823-3960032:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3967774-3967851:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3971591-3971791:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3973607-3973816:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3977181-3977258:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3979148-3979387:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3983196-3983414:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3986692-3986769:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3991976-3992133:1:exon

glipr2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: glipr2
product: GLI pathogenesis-related 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_048558485.1
SIO_010081: glipr2
subclass of: SO_0000673
so part of: glipr2
location: join(3941514..3941619,3941793..3941915,3957930..3957994,3959823..3960032,3967774..3967851,3971591..3971791,3973607..3973816,3977181..3977258,3979148..3979387,3983196..3983414,3986692..3986769,3991976..3992433)
location: region:3941514-3992433:1
so has part: feature:3941514-3941619:1:exon
so has part: feature:3941793-3941915:1:exon
so has part: feature:3957930-3957994:1:exon
so has part: feature:3959823-3960032:1:exon
so has part: feature:3967774-3967851:1:exon
so has part: feature:3971591-3971791:1:exon
so has part: feature:3973607-3973816:1:exon
so has part: feature:3977181-3977258:1:exon
so has part: feature:3979148-3979387:1:exon
so has part: feature:3983196-3983414:1:exon
so has part: feature:3986692-3986769:1:exon
so has part: feature:3991976-3992433:1:exon

position:3941514:1
position: 3941514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3941514-3941619:1:exon

position:3941619:1
position: 3941619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3941793-3941915:1:exon

position:3941793:1
position: 3941793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3957930-3957994:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3959823-3960032:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3967774-3967851:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3971591-3971791:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3973607-3973816:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3977181-3977258:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3979148-3979387:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3983196-3983414:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3986692-3986769:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3991976-3992433:1:exon

glipr2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: glipr2
product: GLI pathogenesis-related 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_048558483.1
SIO_010081: glipr2
subclass of: SO_0000673
so part of: glipr2
location: join(3941528..3941619,3941788..3941915,3957930..3957994,3959823..3960032,3967774..3967851,3971591..3971791,3973607..3973816,3977181..3977258,3979148..3979387,3983196..3983414,3986692..3986769,3991976..3992433)
location: region:3941528-3992433:1
so has part: feature:3941528-3941619:1:exon
so has part: feature:3941788-3941915:1:exon
so has part: feature:3957930-3957994:1:exon
so has part: feature:3959823-3960032:1:exon
so has part: feature:3967774-3967851:1:exon
so has part: feature:3971591-3971791:1:exon
so has part: feature:3973607-3973816:1:exon
so has part: feature:3977181-3977258:1:exon
so has part: feature:3979148-3979387:1:exon
so has part: feature:3983196-3983414:1:exon
so has part: feature:3986692-3986769:1:exon
so has part: feature:3991976-3992433:1:exon

position:3941528:1
position: 3941528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3941528-3941619:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3941788-3941915:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3957930-3957994:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3959823-3960032:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3967774-3967851:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3971591-3971791:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3973607-3973816:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3977181-3977258:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3979148-3979387:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3983196-3983414:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3986692-3986769:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3991976-3992433:1:exon

glipr2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: glipr2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein glipr2 isoform X2
translation: MASRDSNRAGEHFAAQLLKSVNEYRAKHGAGPLTLNTAMSEKAEKWAKYLVASRTLKHSDTTYGENIWCQQGSGSVQVTGKEVADSWYNEVKKYNFSSPGFQKNCGHFTQLVWRESKEMGAGLASDGKGLTIVVAQFDPAGNITNPGYFAENVLPVGCKVEDNESGSAQGDGGEHFAAQLLKSVNEYRVKHGAGPLTLNTAMSEKAEKWAKYLVTSRTLKHSDTSYGENIWCQQGSGSVQATGKDVADSWYNEIKNYDFSSPGFQKNCGHFTQLVWRESKEMGAGLASDGKGLTIVVAQFDPAGNITNPGYFAKNVLPVGSKVEEVEGGSAQGGSGKAPETGHMAPLPDKGIKAFQAELLQEHNRLRTLHQSQPLQLNSDLSKQAQKWADHLIEINQLRHSNTEYGENLWYKWSSETKPPTGAEVSESWYNEIKKYNFSSPGFKSGTGHFTQMVWKESREMGAGCATDGKGMFMVVAVYNPPGNITNPGYFEKNVLPPS
SIO_010081: glipr2
subclass of: SO_0000673
so part of: glipr2
location: join(3957967..3957994,3959823..3960032,3967774..3967851,3971591..3971791,3973607..3973816,3977181..3977258,3979148..3979387,3983196..3983414,3986692..3986769,3991976..3992133)
location: region:3957967-3992133:1
so has part: feature:3957967-3957994:1:exon
so has part: feature:3959823-3960032:1:exon
so has part: feature:3967774-3967851:1:exon
so has part: feature:3971591-3971791:1:exon
so has part: feature:3973607-3973816:1:exon
so has part: feature:3977181-3977258:1:exon
so has part: feature:3979148-3979387:1:exon
so has part: feature:3983196-3983414:1:exon
so has part: feature:3986692-3986769:1:exon
so has part: feature:3991976-3992133:1:exon

XP_048414440.1
type: Protein
SIO_000068: ncbiprotein

position:3957967:1
position: 3957967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3957967-3957994:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3959823-3960032:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3967774-3967851:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3971591-3971791:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3973607-3973816:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3977181-3977258:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3979148-3979387:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3983196-3983414:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3986692-3986769:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3991976-3992133:1:exon

glipr2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: glipr2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein glipr2 isoform X2
translation: MASRDSNRAGEHFAAQLLKSVNEYRAKHGAGPLTLNTAMSEKAEKWAKYLVASRTLKHSDTTYGENIWCQQGSGSVQVTGKEVADSWYNEVKKYNFSSPGFQKNCGHFTQLVWRESKEMGAGLASDGKGLTIVVAQFDPAGNITNPGYFAENVLPVGCKVEDNESGSAQGDGGEHFAAQLLKSVNEYRVKHGAGPLTLNTAMSEKAEKWAKYLVTSRTLKHSDTSYGENIWCQQGSGSVQATGKDVADSWYNEIKNYDFSSPGFQKNCGHFTQLVWRESKEMGAGLASDGKGLTIVVAQFDPAGNITNPGYFAKNVLPVGSKVEEVEGGSAQGGSGKAPETGHMAPLPDKGIKAFQAELLQEHNRLRTLHQSQPLQLNSDLSKQAQKWADHLIEINQLRHSNTEYGENLWYKWSSETKPPTGAEVSESWYNEIKKYNFSSPGFKSGTGHFTQMVWKESREMGAGCATDGKGMFMVVAVYNPPGNITNPGYFEKNVLPPS
SIO_010081: glipr2
subclass of: SO_0000673
so part of: glipr2
location: join(3957967..3957994,3959823..3960032,3967774..3967851,3971591..3971791,3973607..3973816,3977181..3977258,3979148..3979387,3983196..3983414,3986692..3986769,3991976..3992133)
location: region:3957967-3992133:1
so has part: feature:3957967-3957994:1:exon
so has part: feature:3959823-3960032:1:exon
so has part: feature:3967774-3967851:1:exon
so has part: feature:3971591-3971791:1:exon
so has part: feature:3973607-3973816:1:exon
so has part: feature:3977181-3977258:1:exon
so has part: feature:3979148-3979387:1:exon
so has part: feature:3983196-3983414:1:exon
so has part: feature:3986692-3986769:1:exon
so has part: feature:3991976-3992133:1:exon

XP_048414442.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3957967-3957994:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3959823-3960032:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3967774-3967851:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3971591-3971791:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3973607-3973816:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3977181-3977258:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3979148-3979387:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3983196-3983414:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3986692-3986769:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3991976-3992133:1:exon

LOC125465578
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125465578
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4063297..4071333
location: region:4063297-4071333:1
so has part: feature:4063297-4071333:1:exon
subclass of: SO_0000010

125465578
type: Gene
SIO_000068: ncbigene

position:4063297:1
position: 4063297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4071333:1
position: 4071333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4063297-4071333:1:exon

LOC125465578
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465578
product: tubulin beta chain-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048559266.1
SIO_010081: LOC125465578
subclass of: SO_0000673
so part of: LOC125465578
location: join(4063297..4063470,4067782..4067890,4067969..4068079,4069257..4071333)
location: region:4063297-4071333:1
so has part: feature:4063297-4063470:1:exon
so has part: feature:4067782-4067890:1:exon
so has part: feature:4067969-4068079:1:exon
so has part: feature:4069257-4071333:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4063297-4063470:1:exon

position:4063470:1
position: 4063470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4067782-4067890:1:exon

position:4067782:1
position: 4067782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4067890:1
position: 4067890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4067969-4068079:1:exon

position:4067969:1
position: 4067969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4068079:1
position: 4068079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4069257-4071333:1:exon

position:4069257:1
position: 4069257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125465578
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465578
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin beta chain-like
translation: MREIVHVQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDTDLQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQHYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFEEDEEVA
SIO_010081: LOC125465578
subclass of: SO_0000673
so part of: LOC125465578
location: join(4063414..4063470,4067782..4067890,4067969..4068079,4069257..4070311)
location: region:4063414-4070311:1
so has part: feature:4063414-4063470:1:exon
so has part: feature:4067782-4067890:1:exon
so has part: feature:4067969-4068079:1:exon
so has part: feature:4069257-4070311:1:exon

XP_048415223.1
type: Protein
SIO_000068: ncbiprotein

position:4063414:1
position: 4063414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4070311:1
position: 4070311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4063414-4063470:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4067782-4067890:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4067969-4068079:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4069257-4070311:1:exon

LOC125465249
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125465249
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4127239..4147802
location: region:4127239-4147802:1
so has part: feature:4127239-4147802:1:exon
subclass of: SO_0000010

125465249
type: Gene
SIO_000068: ncbigene

position:4127239:1
position: 4127239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4147802:1
position: 4147802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4127239-4147802:1:exon

LOC125465249
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465249
product: tubulin beta chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 462 Proteins, and 77% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048558526.1
SIO_010081: LOC125465249
subclass of: SO_0000673
so part of: LOC125465249
location: join(4127239..4127347,4127443..4127553,4146736..4147802)
location: region:4127239-4147802:1
so has part: feature:4127239-4127347:1:exon
so has part: feature:4127443-4127553:1:exon
so has part: feature:4146736-4147802:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4127239-4127347:1:exon

position:4127347:1
position: 4127347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4127443-4127553:1:exon

position:4127443:1
position: 4127443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4127553:1
position: 4127553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4146736-4147802:1:exon

position:4146736:1
position: 4146736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125465249
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465249
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin beta chain-like
translation: MDSVRSGPFGHLFRPDNFMFGRSGASNNWAKGHYTEGAELADSVMDVVRKEAEGCDCLQGFQLTHSLGGGTGAGMGVLILNKIREEYPDRMMLSFSVIPSPKVSDTVVEPYNATLSIHQLIENTDETFCIDNEALHDICFRTLKLTTPTYGDMNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFVPGFTPLTSRGTQPYRALSVPELTKQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSPYFVEWIPNNVKTAVCDIPPRGLRMAATFIGNTTAIQELFKRIGEQFSAMFRRKAFLHWYTGEGMDETEFTEAEADMLDLIAEYQYYQEVPVHEGARYYVEEVDGDEES
SIO_010081: LOC125465249
subclass of: SO_0000673
so part of: LOC125465249
location: join(4127493..4127553,4146736..4147802)
location: region:4127493-4147802:1
so has part: feature:4127493-4127553:1:exon
so has part: feature:4146736-4147802:1:exon

XP_048414483.1
type: Protein
SIO_000068: ncbiprotein

position:4127493:1
position: 4127493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4127493-4127553:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4146736-4147802:1:exon

hdhd3
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: hdhd3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4174074..4177190)
location: region:4174074-4177190:-1
so has part: feature:4174074-4177190:-1:exon
subclass of: SO_0000010

125465436
type: Gene
SIO_000068: ncbigene

position:4174074:-1
position: 4174074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4177190:-1
position: 4177190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4174074-4177190:-1:exon

hdhd3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: hdhd3
product: haloacid dehalogenase-like hydrolase domain containing 3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558962.1
SIO_010081: hdhd3
subclass of: SO_0000673
so part of: hdhd3
location: complement(join(4174074..4175250,4176763..4177190))
location: region:4174074-4177190:-1
so has part: feature:4176763-4177190:-1:exon
so has part: feature:4174074-4175250:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4176763-4177190:-1:exon

position:4176763:-1
position: 4176763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4174074-4175250:-1:exon

position:4175250:-1
position: 4175250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

hdhd3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: hdhd3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: haloacid dehalogenase-like hydrolase domain-containing protein 3
translation: MRPRLLTWDVKDTLLRVRHTVGEQYSSEAKLHGIRVEAEALDRSFLAALRTQDQLFPNYGADQGVSSQKWWVETVKQTFRFCGVRDERVLTPLAENLYRGFSSAKNWEVFNDVKDTLIHCDRLGIHMAVISNFDRRLEQILTNCNLRQHFQFVLTSEDVGIAKPDPRIFIKALGLAQVQPKQATHIGDNVQKDYLAARAVGMGSYLLCREEEQPAGAEGLVPKAHILHSLQQLSGLLK
SIO_010081: hdhd3
subclass of: SO_0000673
so part of: hdhd3
location: complement(4174489..4175205)
location: region:4174489-4175205:-1
so has part: feature:4174489-4175205:-1:exon

XP_048414919.1
type: Protein
SIO_000068: ncbiprotein

position:4174489:-1
position: 4174489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4175205:-1
position: 4175205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4174489-4175205:-1:exon

bspry
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: bspry
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4193660..4232759)
location: region:4193660-4232759:-1
so has part: feature:4193660-4232759:-1:exon
subclass of: SO_0000010

125465404
type: Gene
SIO_000068: ncbigene

position:4193660:-1
position: 4193660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4232759:-1
position: 4232759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4193660-4232759:-1:exon

bspry
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: bspry
product: B-box and SPRY domain containing
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_048558862.1
SIO_010081: bspry
subclass of: SO_0000673
so part of: bspry
location: complement(join(4193660..4194616,4207769..4207893,4212271..4212296,4212383..4212613,4216115..4216213,4231889..4232759))
location: region:4193660-4232759:-1
so has part: feature:4231889-4232759:-1:exon
so has part: feature:4216115-4216213:-1:exon
so has part: feature:4212383-4212613:-1:exon
so has part: feature:4212271-4212296:-1:exon
so has part: feature:4207769-4207893:-1:exon
so has part: feature:4193660-4194616:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4231889-4232759:-1:exon

position:4231889:-1
position: 4231889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4216115-4216213:-1:exon

position:4216115:-1
position: 4216115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4216213:-1
position: 4216213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4212383-4212613:-1:exon

position:4212383:-1
position: 4212383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4212613:-1
position: 4212613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4212271-4212296:-1:exon

position:4212271:-1
position: 4212271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4212296:-1
position: 4212296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4207769-4207893:-1:exon

position:4207769:-1
position: 4207769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4207893:-1
position: 4207893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4193660-4194616:-1:exon

position:4194616:-1
position: 4194616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

bspry
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: bspry
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: B box and SPRY domain-containing protein
translation: MSQMESRDSEPAQPAPACPSCCRGEEGEASRSPCTCRRPDNQLSTSPAPDCGECPVHRGQPGWYCLTEGRVVCAGCAIPGPCSNHMGASIVEAADRMRNKLVDDCEKLQLRLTAVERFTVGTLNIKNRNVKTDASSARELVIQRLNFIREMCDSEEQRLLEVIHDEEERVQQSILTQNTYWMESQQKLADLKNYLVDILTKMDDTVLVKHQKEIFERAEEAEGILEPEDSNKLNFNLACAHSHLLSNLWASATMICIPVAEDLHIDEKTLHSSLTLSENKKGLTFVRKKIHSYSDCPERFEHWPNALGLESFRTGLHTWRVDVGNSCAYKVGLAYSCLPRKGTGHESRLGYNSSSWVFSRYNEEYTVAHDGQQKTLDLLRRPKLIGVLVDYDGGEILFYDADACAIIHSYRTKLTSPVHAAFAVADNSITIVQ
SIO_010081: bspry
subclass of: SO_0000673
so part of: bspry
location: complement(join(4194090..4194616,4207769..4207893,4212271..4212296,4212383..4212613,4216115..4216213,4231889..4232182))
location: region:4194090-4232182:-1
so has part: feature:4231889-4232182:-1:exon
so has part: feature:4216115-4216213:-1:exon
so has part: feature:4212383-4212613:-1:exon
so has part: feature:4212271-4212296:-1:exon
so has part: feature:4207769-4207893:-1:exon
so has part: feature:4194090-4194616:-1:exon

XP_048414819.1
type: Protein
SIO_000068: ncbiprotein

position:4194090:-1
position: 4194090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4232182:-1
position: 4232182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4231889-4232182:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4216115-4216213:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4212383-4212613:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4212271-4212296:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4207769-4207893:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4194090-4194616:-1:exon

LOC125465405
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125465405
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4268782..4281228
location: region:4268782-4281228:1
so has part: feature:4268782-4281228:1:exon
subclass of: SO_0000010

125465405
type: Gene
SIO_000068: ncbigene

position:4268782:1
position: 4268782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4281228:1
position: 4281228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4268782-4281228:1:exon

LOC125465405
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465405
product: ganglioside GM2 activator-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_048558865.1
SIO_010081: LOC125465405
subclass of: SO_0000673
so part of: LOC125465405
location: join(4268782..4269117,4270373..4270534,4271914..4272096,4278625..4281228)
location: region:4268782-4281228:1
so has part: feature:4268782-4269117:1:exon
so has part: feature:4270373-4270534:1:exon
so has part: feature:4271914-4272096:1:exon
so has part: feature:4278625-4281228:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4268782-4269117:1:exon

position:4269117:1
position: 4269117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4270373-4270534:1:exon

position:4270373:1
position: 4270373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4270534:1
position: 4270534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4271914-4272096:1:exon

position:4271914:1
position: 4271914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4272096:1
position: 4272096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4278625-4281228:1:exon

position:4278625:1
position: 4278625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125465405
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465405
product: ganglioside GM2 activator-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_048558864.1
SIO_010081: LOC125465405
subclass of: SO_0000673
so part of: LOC125465405
location: join(4268785..4269126,4270373..4270534,4271914..4272096,4278625..4281227)
location: region:4268785-4281227:1
so has part: feature:4268785-4269126:1:exon
so has part: feature:4270373-4270534:1:exon
so has part: feature:4271914-4272096:1:exon
so has part: feature:4278625-4281227:1:exon

position:4268785:1
position: 4268785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4281227:1
position: 4281227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4268785-4269126:1:exon

position:4269126:1
position: 4269126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4270373-4270534:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4271914-4272096:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4278625-4281227:1:exon

LOC125465405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465405
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ganglioside GM2 activator-like isoform X1
translation: MKVIVAFLACLGSVSAYQVDNEDTFYIRTLHNKKVKPILSQGTFSWANCGGEKEPAGLKSLSIQPDPISIPGDLQASVAGFTAVNLTAPLTVNITLHKEVAGISVKIPCVEEIGSCVYDDVCQLLNKVIPPGQDCPEPLFTYGLPCHCPFKAGEYSMPNTYFNLPPVELPSWMTSGNYKAMGVLTRNEQELACLKVTFSLKSQ
SIO_010081: LOC125465405
subclass of: SO_0000673
so part of: LOC125465405
location: join(4269016..4269126,4270373..4270534,4271914..4272096,4278625..4278780)
location: region:4269016-4278780:1
so has part: feature:4269016-4269126:1:exon
so has part: feature:4270373-4270534:1:exon
so has part: feature:4271914-4272096:1:exon
so has part: feature:4278625-4278780:1:exon

XP_048414821.1
type: Protein
SIO_000068: ncbiprotein

position:4269016:1
position: 4269016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4278780:1
position: 4278780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4269016-4269126:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4270373-4270534:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4271914-4272096:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4278625-4278780:1:exon

LOC125465405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465405
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ganglioside GM2 activator-like isoform X2
translation: MKVIVAFLACLGSVSAYQVDNEDTFYIRTLHNKKILSQGTFSWANCGGEKEPAGLKSLSIQPDPISIPGDLQASVAGFTAVNLTAPLTVNITLHKEVAGISVKIPCVEEIGSCVYDDVCQLLNKVIPPGQDCPEPLFTYGLPCHCPFKAGEYSMPNTYFNLPPVELPSWMTSGNYKAMGVLTRNEQELACLKVTFSLKSQ
SIO_010081: LOC125465405
subclass of: SO_0000673
so part of: LOC125465405
location: join(4269016..4269117,4270373..4270534,4271914..4272096,4278625..4278780)
location: region:4269016-4278780:1
so has part: feature:4269016-4269117:1:exon
so has part: feature:4270373-4270534:1:exon
so has part: feature:4271914-4272096:1:exon
so has part: feature:4278625-4278780:1:exon

XP_048414822.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4269016-4269117:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4270373-4270534:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4271914-4272096:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4278625-4278780:1:exon

LOC125465405
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465405
product: ganglioside GM2 activator-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048558866.1
SIO_010081: LOC125465405
subclass of: SO_0000673
so part of: LOC125465405
location: join(4269430..4269454,4270359..4270534,4271914..4272096,4278625..4281228)
location: region:4269430-4281228:1
so has part: feature:4269430-4269454:1:exon
so has part: feature:4270359-4270534:1:exon
so has part: feature:4271914-4272096:1:exon
so has part: feature:4278625-4281228:1:exon

position:4269430:1
position: 4269430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4269430-4269454:1:exon

position:4269454:1
position: 4269454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4270359-4270534:1:exon

position:4270359:1
position: 4270359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4271914-4272096:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4278625-4281228:1:exon

LOC125465405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465405
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ganglioside GM2 activator-like isoform X3
translation: MGTGPLFQILSQGTFSWANCGGEKEPAGLKSLSIQPDPISIPGDLQASVAGFTAVNLTAPLTVNITLHKEVAGISVKIPCVEEIGSCVYDDVCQLLNKVIPPGQDCPEPLFTYGLPCHCPFKAGEYSMPNTYFNLPPVELPSWMTSGNYKAMGVLTRNEQELACLKVTFSLKSQ
SIO_010081: LOC125465405
subclass of: SO_0000673
so part of: LOC125465405
location: join(4269445..4269454,4270359..4270534,4271914..4272096,4278625..4278780)
location: region:4269445-4278780:1
so has part: feature:4269445-4269454:1:exon
so has part: feature:4270359-4270534:1:exon
so has part: feature:4271914-4272096:1:exon
so has part: feature:4278625-4278780:1:exon

XP_048414823.1
type: Protein
SIO_000068: ncbiprotein

position:4269445:1
position: 4269445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4269445-4269454:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4270359-4270534:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4271914-4272096:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4278625-4278780:1:exon

wdr31
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: wdr31
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4283617..4319139
location: region:4283617-4319139:1
so has part: feature:4283617-4319139:1:exon
subclass of: SO_0000010

125465295
type: Gene
SIO_000068: ncbigene

position:4283617:1
position: 4283617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4319139:1
position: 4319139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4283617-4319139:1:exon

wdr31
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: wdr31
product: WD repeat domain 31, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048558580.1
SIO_010081: wdr31
subclass of: SO_0000673
so part of: wdr31
location: join(4283617..4283857,4284569..4284723,4296678..4296865,4298502..4298631,4299069..4299143,4301234..4301378,4302011..4302111,4310360..4310427,4311654..4311795,4314047..4314209,4318632..4319139)
location: region:4283617-4319139:1
so has part: feature:4283617-4283857:1:exon
so has part: feature:4284569-4284723:1:exon
so has part: feature:4296678-4296865:1:exon
so has part: feature:4298502-4298631:1:exon
so has part: feature:4299069-4299143:1:exon
so has part: feature:4301234-4301378:1:exon
so has part: feature:4302011-4302111:1:exon
so has part: feature:4310360-4310427:1:exon
so has part: feature:4311654-4311795:1:exon
so has part: feature:4314047-4314209:1:exon
so has part: feature:4318632-4319139:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4283617-4283857:1:exon

position:4283857:1
position: 4283857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4284569-4284723:1:exon

position:4284569:1
position: 4284569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4284723:1
position: 4284723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4296678-4296865:1:exon

position:4296678:1
position: 4296678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4296865:1
position: 4296865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4298502-4298631:1:exon

position:4298502:1
position: 4298502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4298631:1
position: 4298631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4299069-4299143:1:exon

position:4299069:1
position: 4299069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4299143:1
position: 4299143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4301234-4301378:1:exon

position:4301234:1
position: 4301234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4301378:1
position: 4301378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4302011-4302111:1:exon

position:4302011:1
position: 4302011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4302111:1
position: 4302111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4310360-4310427:1:exon

position:4310360:1
position: 4310360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4310427:1
position: 4310427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4311654-4311795:1:exon

position:4311654:1
position: 4311654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4311795:1
position: 4311795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4314047-4314209:1:exon

position:4314047:1
position: 4314047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4314209:1
position: 4314209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4318632-4319139:1:exon

position:4318632:1
position: 4318632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

wdr31
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: wdr31
product: WD repeat domain 31, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_048558578.1
SIO_010081: wdr31
subclass of: SO_0000673
so part of: wdr31
location: join(4283617..4283857,4284569..4284723,4298502..4298631,4299069..4299143,4301234..4301378,4302011..4302111,4310360..4310427,4311654..4311795,4314047..4314209,4318632..4319139)
location: region:4283617-4319139:1
so has part: feature:4283617-4283857:1:exon
so has part: feature:4284569-4284723:1:exon
so has part: feature:4298502-4298631:1:exon
so has part: feature:4299069-4299143:1:exon
so has part: feature:4301234-4301378:1:exon
so has part: feature:4302011-4302111:1:exon
so has part: feature:4310360-4310427:1:exon
so has part: feature:4311654-4311795:1:exon
so has part: feature:4314047-4314209:1:exon
so has part: feature:4318632-4319139:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4283617-4283857:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4284569-4284723:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4298502-4298631:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4299069-4299143:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4301234-4301378:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4302011-4302111:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4310360-4310427:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4311654-4311795:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4314047-4314209:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4318632-4319139:1:exon

wdr31
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: wdr31
product: WD repeat domain 31, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048558579.1
SIO_010081: wdr31
subclass of: SO_0000673
so part of: wdr31
location: join(4283617..4283857,4284569..4284723,4298502..4298631,4299069..4299143,4301234..4301378,4302011..4302111,4310360..4310427,4311654..4311678,4314047..4314209,4318632..4319139)
location: region:4283617-4319139:1
so has part: feature:4283617-4283857:1:exon
so has part: feature:4284569-4284723:1:exon
so has part: feature:4298502-4298631:1:exon
so has part: feature:4299069-4299143:1:exon
so has part: feature:4301234-4301378:1:exon
so has part: feature:4302011-4302111:1:exon
so has part: feature:4310360-4310427:1:exon
so has part: feature:4311654-4311678:1:exon
so has part: feature:4314047-4314209:1:exon
so has part: feature:4318632-4319139:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4283617-4283857:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4284569-4284723:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4298502-4298631:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4299069-4299143:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4301234-4301378:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4302011-4302111:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4310360-4310427:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4311654-4311678:1:exon

position:4311678:1
position: 4311678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4314047-4314209:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4318632-4319139:1:exon

wdr31
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: wdr31
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 31 isoform X1
translation: MGKPQSKQKRNISRYRIDGDAGHCSVTQVVQQYSPAHNDAVTSLASLTSDNCVSGGKDKTVVIYDWKSGCVQQKFMGHESDVTKVTCLFQSNRIFSASRDKTALMWDMYNKAGPLQEFIGHELVVTGLAVSPDGLKLCTGSRDNSMCIWDVETGDCLQSCSISRNLVTHICWVPAESRVIQTSEDKMIRIWNSHELQVTHTFPIKQHIQMHCDASPDGRYCITCSNGFSGEGCEATLWDLRQTKYKVCEYKGHLQTTAACIFLPNATSSFPLVATSGHDCTVKIWNRDTAVCVSSLYLDGTGPLTSLASSDAANLLCGSFNTGIHQLRVNLSNSCSLSEVARF
SIO_010081: wdr31
subclass of: SO_0000673
so part of: wdr31
location: join(4284677..4284723,4298502..4298631,4299069..4299143,4301234..4301378,4302011..4302111,4310360..4310427,4311654..4311795,4314047..4314209,4318632..4318792)
location: region:4284677-4318792:1
so has part: feature:4284677-4284723:1:exon
so has part: feature:4298502-4298631:1:exon
so has part: feature:4299069-4299143:1:exon
so has part: feature:4301234-4301378:1:exon
so has part: feature:4302011-4302111:1:exon
so has part: feature:4310360-4310427:1:exon
so has part: feature:4311654-4311795:1:exon
so has part: feature:4314047-4314209:1:exon
so has part: feature:4318632-4318792:1:exon

XP_048414535.1
type: Protein
SIO_000068: ncbiprotein

position:4284677:1
position: 4284677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4318792:1
position: 4318792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4284677-4284723:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4298502-4298631:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4299069-4299143:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4301234-4301378:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4302011-4302111:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4310360-4310427:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4311654-4311795:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4314047-4314209:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4318632-4318792:1:exon

wdr31
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: wdr31
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 31 isoform X2
translation: MGKPQSKQKRNISRYRIDGDAGHCSVTQVVQQYSPAHNDAVTSLASLTSDNCVSGGKDKTVVIYDWKSGCVQQKFMGHESDVTKVTCLFQSNRIFSASRDKTALMWDMYNKAGPLQEFIGHELVVTGLAVSPDGLKLCTGSRDNSMCIWDVETGDCLQSCSISRNLVTHICWVPAESRVIQTSEDKMIRIWNSHELQLWDLRQTKYKVCEYKGHLQTTAACIFLPNATSSFPLVATSGHDCTVKIWNRDTAVCVSSLYLDGTGPLTSLASSDAANLLCGSFNTGIHQLRVNLSNSCSLSEVARF
SIO_010081: wdr31
subclass of: SO_0000673
so part of: wdr31
location: join(4284677..4284723,4298502..4298631,4299069..4299143,4301234..4301378,4302011..4302111,4310360..4310427,4311654..4311678,4314047..4314209,4318632..4318792)
location: region:4284677-4318792:1
so has part: feature:4284677-4284723:1:exon
so has part: feature:4298502-4298631:1:exon
so has part: feature:4299069-4299143:1:exon
so has part: feature:4301234-4301378:1:exon
so has part: feature:4302011-4302111:1:exon
so has part: feature:4310360-4310427:1:exon
so has part: feature:4311654-4311678:1:exon
so has part: feature:4314047-4314209:1:exon
so has part: feature:4318632-4318792:1:exon

XP_048414536.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4284677-4284723:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4298502-4298631:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4299069-4299143:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4301234-4301378:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4302011-4302111:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4310360-4310427:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4311654-4311678:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4314047-4314209:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4318632-4318792:1:exon

wdr31
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: wdr31
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 31 isoform X3
translation: MGHESDVTKVTCLFQSNRIFSASRDKTALMWDMYNKAGPLQEFIGHELVVTGLAVSPDGLKLCTGSRDNSMCIWDVETGDCLQSCSISRNLVTHICWVPAESRVIQTSEDKMIRIWNSHELQVTHTFPIKQHIQMHCDASPDGRYCITCSNGFSGEGCEATLWDLRQTKYKVCEYKGHLQTTAACIFLPNATSSFPLVATSGHDCTVKIWNRDTAVCVSSLYLDGTGPLTSLASSDAANLLCGSFNTGIHQLRVNLSNSCSLSEVARF
SIO_010081: wdr31
subclass of: SO_0000673
so part of: wdr31
location: join(4299117..4299143,4301234..4301378,4302011..4302111,4310360..4310427,4311654..4311795,4314047..4314209,4318632..4318792)
location: region:4299117-4318792:1
so has part: feature:4299117-4299143:1:exon
so has part: feature:4301234-4301378:1:exon
so has part: feature:4302011-4302111:1:exon
so has part: feature:4310360-4310427:1:exon
so has part: feature:4311654-4311795:1:exon
so has part: feature:4314047-4314209:1:exon
so has part: feature:4318632-4318792:1:exon

XP_048414537.1
type: Protein
SIO_000068: ncbiprotein

position:4299117:1
position: 4299117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4299117-4299143:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4301234-4301378:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4302011-4302111:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4310360-4310427:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4311654-4311795:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4314047-4314209:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4318632-4318792:1:exon

LOC125465533
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125465533
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4449108..4451754
location: region:4449108-4451754:1
so has part: feature:4449108-4451754:1:exon
subclass of: SO_0000010

125465533
type: Gene
SIO_000068: ncbigene

position:4449108:1
position: 4449108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4451754:1
position: 4451754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4449108-4451754:1:exon

LOC125465533
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465533
product: E3 ubiquitin-protein ligase RNF183-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048559164.1
SIO_010081: LOC125465533
subclass of: SO_0000673
so part of: LOC125465533
location: 4449108..4451754
location: region:4449108-4451754:1
so has part: feature:4449108-4451754:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4449108-4451754:1:exon

LOC125465533
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465533
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF183-like
translation: MTPEGNGSECECAVCWNPYDNAFRTPKILECKHTFCLECLARMSLASVPEMDPGMSCPLCRHLTPLGAGQLVTGLRTNAEILGRMRLQPVHVYLDHGRLFYKGPSKASFLLRRPTVYTLSLDVEREGGPPLRTQAAPALEDRLPQNTMWKCCQSPPCRTAIYIMIATFGITIILVISLFWTKKILWDLG
SIO_010081: LOC125465533
subclass of: SO_0000673
so part of: LOC125465533
location: 4449697..4450266
location: region:4449697-4450266:1
so has part: feature:4449697-4450266:1:exon

XP_048415121.1
type: Protein
SIO_000068: ncbiprotein

position:4449697:1
position: 4449697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4450266:1
position: 4450266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4449697-4450266:1:exon

prpf4
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: prpf4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4461416..4505003)
location: region:4461416-4505003:-1
so has part: feature:4461416-4505003:-1:exon
subclass of: SO_0000010

125465562
type: Gene
SIO_000068: ncbigene

position:4461416:-1
position: 4461416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4505003:-1
position: 4505003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4461416-4505003:-1:exon

prpf4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: prpf4
product: PRP4 pre-mRNA processing factor 4 homolog (yeast), transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_048559229.1
SIO_010081: prpf4
subclass of: SO_0000673
so part of: prpf4
location: complement(join(4461416..4462281,4462859..4462977,4465080..4465187,4474460..4474582,4476414..4476503,4479356..4479479,4482251..4482309,4488967..4489061,4490039..4490132,4491111..4491190,4491351..4491435,4495329..4495515,4503019..4503203,4504949..4505003))
location: region:4461416-4505003:-1
so has part: feature:4504949-4505003:-1:exon
so has part: feature:4503019-4503203:-1:exon
so has part: feature:4495329-4495515:-1:exon
so has part: feature:4491351-4491435:-1:exon
so has part: feature:4491111-4491190:-1:exon
so has part: feature:4490039-4490132:-1:exon
so has part: feature:4488967-4489061:-1:exon
so has part: feature:4482251-4482309:-1:exon
so has part: feature:4479356-4479479:-1:exon
so has part: feature:4476414-4476503:-1:exon
so has part: feature:4474460-4474582:-1:exon
so has part: feature:4465080-4465187:-1:exon
so has part: feature:4462859-4462977:-1:exon
so has part: feature:4461416-4462281:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4504949-4505003:-1:exon

position:4504949:-1
position: 4504949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4503019-4503203:-1:exon

position:4503019:-1
position: 4503019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4503203:-1
position: 4503203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4495329-4495515:-1:exon

position:4495329:-1
position: 4495329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4495515:-1
position: 4495515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4491351-4491435:-1:exon

position:4491351:-1
position: 4491351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4491435:-1
position: 4491435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4491111-4491190:-1:exon

position:4491111:-1
position: 4491111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4491190:-1
position: 4491190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4490039-4490132:-1:exon

position:4490039:-1
position: 4490039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4490132:-1
position: 4490132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4488967-4489061:-1:exon

position:4488967:-1
position: 4488967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4489061:-1
position: 4489061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4482251-4482309:-1:exon

position:4482251:-1
position: 4482251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4482309:-1
position: 4482309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4479356-4479479:-1:exon

position:4479356:-1
position: 4479356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4479479:-1
position: 4479479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4476414-4476503:-1:exon

position:4476414:-1
position: 4476414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4476503:-1
position: 4476503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4474460-4474582:-1:exon

position:4474460:-1
position: 4474460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4474582:-1
position: 4474582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4465080-4465187:-1:exon

position:4465080:-1
position: 4465080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4465187:-1
position: 4465187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4462859-4462977:-1:exon

position:4462859:-1
position: 4462859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4462977:-1
position: 4462977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4461416-4462281:-1:exon

position:4462281:-1
position: 4462281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

prpf4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: prpf4
product: PRP4 pre-mRNA processing factor 4 homolog (yeast), transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_048559228.1
SIO_010081: prpf4
subclass of: SO_0000673
so part of: prpf4
location: complement(join(4461416..4462281,4462859..4462977,4465080..4465187,4474460..4474582,4476414..4476503,4479356..4479479,4482251..4482309,4488967..4489061,4490039..4490132,4491111..4491190,4491351..4491435,4495329..4495515,4503019..4503203,4504194..4504850))
location: region:4461416-4504850:-1
so has part: feature:4504194-4504850:-1:exon
so has part: feature:4503019-4503203:-1:exon
so has part: feature:4495329-4495515:-1:exon
so has part: feature:4491351-4491435:-1:exon
so has part: feature:4491111-4491190:-1:exon
so has part: feature:4490039-4490132:-1:exon
so has part: feature:4488967-4489061:-1:exon
so has part: feature:4482251-4482309:-1:exon
so has part: feature:4479356-4479479:-1:exon
so has part: feature:4476414-4476503:-1:exon
so has part: feature:4474460-4474582:-1:exon
so has part: feature:4465080-4465187:-1:exon
so has part: feature:4462859-4462977:-1:exon
so has part: feature:4461416-4462281:-1:exon

position:4504850:-1
position: 4504850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4504194-4504850:-1:exon

position:4504194:-1
position: 4504194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4503019-4503203:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4495329-4495515:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4491351-4491435:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4491111-4491190:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4490039-4490132:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4488967-4489061:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4482251-4482309:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4479356-4479479:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4476414-4476503:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4474460-4474582:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4465080-4465187:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4462859-4462977:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4461416-4462281:-1:exon

prpf4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: prpf4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U4/U6 small nuclear ribonucleoprotein Prp4 isoform X1
translation: MGNLAPTHPTPLWSRRQPEHPEETRVDTGRTCNLHKLGTLALRDSATLCNCFLPHITRMSDDDDVPLPKKSRIYYGSLEEKEKERISKGDAGYLGKEAVKAGVEAGHINISSNEFYEVEEHVSERQAEVLAEFERRKRARQINVSTDDAEVKACLRALGEPITLFGEGPAERRERLRNILSVVGADALKKTEKTEDAKKSRQEHQQTWYHEGPSTLKTARVYIARFSLPRAVKRLEEARANKEIPEASRTARQQELHKSLRALNNFCSQIGDDRPISYCQFSPNSKLLVTASWSGLCKLWGVPDCSLIRTLRGHSTNVGAIVFHPQATISLDEKDCNMASCAADGSVKLWNLESDEPVADIEGHTMRVARVAWHPSGRFLGTTCYDHSWRLWDLEAQEEILHQEGHSKGVYDIAFHRDGSLVGTGGLDAFGRLWDLRTGRCIMFLEGHLKEIYGISFSPNGYHTATGSGDNTCKVWDLRQRKCIYTIPAHHNLLSAVRFQPTDGHYLLTGAYDNTAKIWTHPGWSPLKTMAGHEGKVMGLDISPNGQLIATCSYDRTFKLWTSE
SIO_010081: prpf4
subclass of: SO_0000673
so part of: prpf4
location: complement(join(4462088..4462281,4462859..4462977,4465080..4465187,4474460..4474582,4476414..4476503,4479356..4479479,4482251..4482309,4488967..4489061,4490039..4490132,4491111..4491190,4491351..4491435,4495329..4495515,4503019..4503203,4504194..4504345))
location: region:4462088-4504345:-1
so has part: feature:4504194-4504345:-1:exon
so has part: feature:4503019-4503203:-1:exon
so has part: feature:4495329-4495515:-1:exon
so has part: feature:4491351-4491435:-1:exon
so has part: feature:4491111-4491190:-1:exon
so has part: feature:4490039-4490132:-1:exon
so has part: feature:4488967-4489061:-1:exon
so has part: feature:4482251-4482309:-1:exon
so has part: feature:4479356-4479479:-1:exon
so has part: feature:4476414-4476503:-1:exon
so has part: feature:4474460-4474582:-1:exon
so has part: feature:4465080-4465187:-1:exon
so has part: feature:4462859-4462977:-1:exon
so has part: feature:4462088-4462281:-1:exon

XP_048415185.1
type: Protein
SIO_000068: ncbiprotein

position:4462088:-1
position: 4462088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4504345:-1
position: 4504345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4504194-4504345:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4503019-4503203:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4495329-4495515:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4491351-4491435:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4491111-4491190:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4490039-4490132:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4488967-4489061:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4482251-4482309:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4479356-4479479:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4476414-4476503:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4474460-4474582:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4465080-4465187:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4462859-4462977:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4462088-4462281:-1:exon

prpf4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: prpf4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U4/U6 small nuclear ribonucleoprotein Prp4 isoform X2
translation: MSDDDDVPLPKKSRIYYGSLEEKEKERISKGDAGYLGKEAVKAGVEAGHINISSNEFYEVEEHVSERQAEVLAEFERRKRARQINVSTDDAEVKACLRALGEPITLFGEGPAERRERLRNILSVVGADALKKTEKTEDAKKSRQEHQQTWYHEGPSTLKTARVYIARFSLPRAVKRLEEARANKEIPEASRTARQQELHKSLRALNNFCSQIGDDRPISYCQFSPNSKLLVTASWSGLCKLWGVPDCSLIRTLRGHSTNVGAIVFHPQATISLDEKDCNMASCAADGSVKLWNLESDEPVADIEGHTMRVARVAWHPSGRFLGTTCYDHSWRLWDLEAQEEILHQEGHSKGVYDIAFHRDGSLVGTGGLDAFGRLWDLRTGRCIMFLEGHLKEIYGISFSPNGYHTATGSGDNTCKVWDLRQRKCIYTIPAHHNLLSAVRFQPTDGHYLLTGAYDNTAKIWTHPGWSPLKTMAGHEGKVMGLDISPNGQLIATCSYDRTFKLWTSE
SIO_010081: prpf4
subclass of: SO_0000673
so part of: prpf4
location: complement(join(4462088..4462281,4462859..4462977,4465080..4465187,4474460..4474582,4476414..4476503,4479356..4479479,4482251..4482309,4488967..4489061,4490039..4490132,4491111..4491190,4491351..4491435,4495329..4495515,4503019..4503181))
location: region:4462088-4503181:-1
so has part: feature:4503019-4503181:-1:exon
so has part: feature:4495329-4495515:-1:exon
so has part: feature:4491351-4491435:-1:exon
so has part: feature:4491111-4491190:-1:exon
so has part: feature:4490039-4490132:-1:exon
so has part: feature:4488967-4489061:-1:exon
so has part: feature:4482251-4482309:-1:exon
so has part: feature:4479356-4479479:-1:exon
so has part: feature:4476414-4476503:-1:exon
so has part: feature:4474460-4474582:-1:exon
so has part: feature:4465080-4465187:-1:exon
so has part: feature:4462859-4462977:-1:exon
so has part: feature:4462088-4462281:-1:exon

XP_048415186.1
type: Protein
SIO_000068: ncbiprotein

position:4503181:-1
position: 4503181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4503019-4503181:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4495329-4495515:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4491351-4491435:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4491111-4491190:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4490039-4490132:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4488967-4489061:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4482251-4482309:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4479356-4479479:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4476414-4476503:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4474460-4474582:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4465080-4465187:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4462859-4462977:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4462088-4462281:-1:exon

cdc26
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: cdc26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4505075..4510998
location: region:4505075-4510998:1
so has part: feature:4505075-4510998:1:exon
subclass of: SO_0000010

125465356
type: Gene
SIO_000068: ncbigene

position:4505075:1
position: 4505075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4510998:1
position: 4510998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4505075-4510998:1:exon

cdc26
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: cdc26
product: cell division cycle 26 homolog
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558735.1
SIO_010081: cdc26
subclass of: SO_0000673
so part of: cdc26
location: join(4505075..4505232,4510476..4510998)
location: region:4505075-4510998:1
so has part: feature:4505075-4505232:1:exon
so has part: feature:4510476-4510998:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4505075-4505232:1:exon

position:4505232:1
position: 4505232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4510476-4510998:1:exon

position:4510476:1
position: 4510476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

cdc26
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: cdc26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: anaphase-promoting complex subunit CDC26
translation: MLRRKPTRLELKLDDIEEFESMKKELENRKKQQREEGVMVSSSDVDSANGARDDAKVREKINERIGYRPNPHINKPFSLFGNLH
SIO_010081: cdc26
subclass of: SO_0000673
so part of: cdc26
location: join(4505152..4505232,4510476..4510649)
location: region:4505152-4510649:1
so has part: feature:4505152-4505232:1:exon
so has part: feature:4510476-4510649:1:exon

XP_048414692.1
type: Protein
SIO_000068: ncbiprotein

position:4505152:1
position: 4505152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4510649:1
position: 4510649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4505152-4505232:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4510476-4510649:1:exon

slc31a1
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: slc31a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4515999..4572710)
location: region:4515999-4572710:-1
so has part: feature:4515999-4572710:-1:exon
subclass of: SO_0000010

125465355
type: Gene
SIO_000068: ncbigene

position:4515999:-1
position: 4515999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4572710:-1
position: 4572710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4515999-4572710:-1:exon

slc31a1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: slc31a1
product: solute carrier family 31 member 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558734.1
SIO_010081: slc31a1
subclass of: SO_0000673
so part of: slc31a1
location: complement(join(4515999..4520084,4521128..4521296,4524512..4524584,4531068..4531229,4572621..4572710))
location: region:4515999-4572710:-1
so has part: feature:4572621-4572710:-1:exon
so has part: feature:4531068-4531229:-1:exon
so has part: feature:4524512-4524584:-1:exon
so has part: feature:4521128-4521296:-1:exon
so has part: feature:4515999-4520084:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4572621-4572710:-1:exon

position:4572621:-1
position: 4572621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4531068-4531229:-1:exon

position:4531068:-1
position: 4531068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4531229:-1
position: 4531229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4524512-4524584:-1:exon

position:4524512:-1
position: 4524512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4524584:-1
position: 4524584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4521128-4521296:-1:exon

position:4521128:-1
position: 4521128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4521296:-1
position: 4521296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4515999-4520084:-1:exon

position:4520084:-1
position: 4520084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

slc31a1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: slc31a1
product: solute carrier family 31 member 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558733.1
SIO_010081: slc31a1
subclass of: SO_0000673
so part of: slc31a1
location: complement(join(4515999..4520084,4521128..4521296,4524512..4524584,4531068..4531229,4572590..4572669))
location: region:4515999-4572669:-1
so has part: feature:4572590-4572669:-1:exon
so has part: feature:4531068-4531229:-1:exon
so has part: feature:4524512-4524584:-1:exon
so has part: feature:4521128-4521296:-1:exon
so has part: feature:4515999-4520084:-1:exon

position:4572669:-1
position: 4572669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4572590-4572669:-1:exon

position:4572590:-1
position: 4572590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4531068-4531229:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4524512-4524584:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4521128-4521296:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4515999-4520084:-1:exon

slc31a1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: slc31a1
product: solute carrier family 31 member 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558732.1
SIO_010081: slc31a1
subclass of: SO_0000673
so part of: slc31a1
location: complement(join(4515999..4520084,4521128..4521296,4524512..4524584,4531068..4531229,4548300..4548385))
location: region:4515999-4548385:-1
so has part: feature:4548300-4548385:-1:exon
so has part: feature:4531068-4531229:-1:exon
so has part: feature:4524512-4524584:-1:exon
so has part: feature:4521128-4521296:-1:exon
so has part: feature:4515999-4520084:-1:exon

position:4548385:-1
position: 4548385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4548300-4548385:-1:exon

position:4548300:-1
position: 4548300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4531068-4531229:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4524512-4524584:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4521128-4521296:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4515999-4520084:-1:exon

slc31a1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: slc31a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: high affinity copper uptake protein 1 isoform X1
translation: MNDHNKTLIESLGLIFSTTTMNMSMDDSSHHSMTMSSDSHAHHSSTSAPGHDHGSGGMMMQMTFYFGYKKVELLFPGIVINSVGGMVGACVVVFLCALAYEGLKISRECLLRKSQVNVRYNSMPVPGPNGTILMETHKTVGQQMFSVPHLIQTLLHIIQVVISYFLMLIFMTYNGYLCIAVALGAGAGYFLFSWKKAVVVDITEHCH
SIO_010081: slc31a1
subclass of: SO_0000673
so part of: slc31a1
location: complement(join(4519883..4520084,4521128..4521296,4524512..4524584,4531068..4531229,4548300..4548317))
location: region:4519883-4548317:-1
so has part: feature:4548300-4548317:-1:exon
so has part: feature:4531068-4531229:-1:exon
so has part: feature:4524512-4524584:-1:exon
so has part: feature:4521128-4521296:-1:exon
so has part: feature:4519883-4520084:-1:exon

XP_048414689.1
type: Protein
SIO_000068: ncbiprotein

position:4519883:-1
position: 4519883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4548317:-1
position: 4548317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4548300-4548317:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4531068-4531229:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4524512-4524584:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4521128-4521296:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4519883-4520084:-1:exon

slc31a1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: slc31a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: high affinity copper uptake protein 1 isoform X2
translation: MNMSMDDSSHHSMTMSSDSHAHHSSTSAPGHDHGSGGMMMQMTFYFGYKKVELLFPGIVINSVGGMVGACVVVFLCALAYEGLKISRECLLRKSQVNVRYNSMPVPGPNGTILMETHKTVGQQMFSVPHLIQTLLHIIQVVISYFLMLIFMTYNGYLCIAVALGAGAGYFLFSWKKAVVVDITEHCH
SIO_010081: slc31a1
subclass of: SO_0000673
so part of: slc31a1
location: complement(join(4519883..4520084,4521128..4521296,4524512..4524584,4531068..4531187))
location: region:4519883-4531187:-1
so has part: feature:4531068-4531187:-1:exon
so has part: feature:4524512-4524584:-1:exon
so has part: feature:4521128-4521296:-1:exon
so has part: feature:4519883-4520084:-1:exon

XP_048414690.1
type: Protein
SIO_000068: ncbiprotein

position:4531187:-1
position: 4531187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4531068-4531187:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4524512-4524584:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4521128-4521296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4519883-4520084:-1:exon

slc31a1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: slc31a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: high affinity copper uptake protein 1 isoform X2
translation: MNMSMDDSSHHSMTMSSDSHAHHSSTSAPGHDHGSGGMMMQMTFYFGYKKVELLFPGIVINSVGGMVGACVVVFLCALAYEGLKISRECLLRKSQVNVRYNSMPVPGPNGTILMETHKTVGQQMFSVPHLIQTLLHIIQVVISYFLMLIFMTYNGYLCIAVALGAGAGYFLFSWKKAVVVDITEHCH
SIO_010081: slc31a1
subclass of: SO_0000673
so part of: slc31a1
location: complement(join(4519883..4520084,4521128..4521296,4524512..4524584,4531068..4531187))
location: region:4519883-4531187:-1
so has part: feature:4531068-4531187:-1:exon
so has part: feature:4524512-4524584:-1:exon
so has part: feature:4521128-4521296:-1:exon
so has part: feature:4519883-4520084:-1:exon

XP_048414691.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4531068-4531187:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4524512-4524584:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4521128-4521296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4519883-4520084:-1:exon

fkbp15a
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: fkbp15a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4581594..4658918
location: region:4581594-4658918:1
so has part: feature:4581594-4658918:1:exon
subclass of: SO_0000010

125465484
type: Gene
SIO_000068: ncbigene

position:4581594:1
position: 4581594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4658918:1
position: 4658918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4581594-4658918:1:exon

fkbp15a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: fkbp15a
product: FKBP prolyl isomerase family member 15a, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048559073.1
SIO_010081: fkbp15a
subclass of: SO_0000673
so part of: fkbp15a
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urn:…
SIO_000300: 1
SIO_000628: feature:4581594-4581794:1:exon

position:4581794:1
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reference: sequence
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urn:…
SIO_000300: 2
SIO_000628: feature:4592735-4592844:1:exon

position:4592735:1
position: 4592735
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position:4592844:1
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urn:…
SIO_000300: 3
SIO_000628: feature:4594648-4594726:1:exon

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reference: sequence
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position:4594726:1
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reference: sequence
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urn:…
SIO_000300: 4
SIO_000628: feature:4595167-4595236:1:exon

position:4595167:1
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reference: sequence
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position:4595236:1
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reference: sequence
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urn:…
SIO_000300: 5
SIO_000628: feature:4595615-4595689:1:exon

position:4595615:1
position: 4595615
reference: sequence
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position:4595689:1
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urn:…
SIO_000300: 6
SIO_000628: feature:4597851-4597949:1:exon

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position:4597949:1
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urn:…
SIO_000300: 7
SIO_000628: feature:4598614-4598763:1:exon

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position:4598763:1
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urn:…
SIO_000300: 8
SIO_000628: feature:4599206-4599274:1:exon

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position: 4599206
reference: sequence
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position:4599274:1
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reference: sequence
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urn:…
SIO_000300: 9
SIO_000628: feature:4602678-4602821:1:exon

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position: 4602678
reference: sequence
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position:4602821:1
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urn:…
SIO_000300: 10
SIO_000628: feature:4603349-4603491:1:exon

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position: 4603349
reference: sequence
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position:4603491:1
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urn:…
SIO_000300: 11
SIO_000628: feature:4607564-4607612:1:exon

position:4607564:1
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reference: sequence
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position:4607612:1
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urn:…
SIO_000300: 12
SIO_000628: feature:4608111-4608227:1:exon

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reference: sequence
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position:4608227:1
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urn:…
SIO_000300: 13
SIO_000628: feature:4612293-4612401:1:exon

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position:4612401:1
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urn:…
SIO_000300: 14
SIO_000628: feature:4612806-4612900:1:exon

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reference: sequence
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position:4612900:1
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urn:…
SIO_000300: 15
SIO_000628: feature:4615072-4615174:1:exon

position:4615072:1
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position:4615174:1
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urn:…
SIO_000300: 16
SIO_000628: feature:4615481-4615590:1:exon

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position:4615590:1
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urn:…
SIO_000300: 17
SIO_000628: feature:4620303-4620407:1:exon

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position:4620407:1
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urn:…
SIO_000300: 18
SIO_000628: feature:4621117-4621211:1:exon

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position:4621211:1
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urn:…
SIO_000300: 19
SIO_000628: feature:4625015-4625117:1:exon

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position:4625117:1
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urn:…
SIO_000300: 20
SIO_000628: feature:4627129-4627161:1:exon

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position:4627161:1
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urn:…
SIO_000300: 21
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urn:…
SIO_000300: 22
SIO_000628: feature:4634208-4634344:1:exon

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position:4634344:1
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urn:…
SIO_000300: 23
SIO_000628: feature:4634599-4634754:1:exon

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urn:…
SIO_000300: 24
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urn:…
SIO_000300: 25
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urn:…
SIO_000300: 26
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urn:…
SIO_000300: 27
SIO_000628: feature:4648413-4648535:1:exon

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urn:…
SIO_000300: 28
SIO_000628: feature:4651914-4652021:1:exon

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urn:…
SIO_000300: 29
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urn:…
SIO_000300: 30
SIO_000628: feature:4657579-4657684:1:exon

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urn:…
SIO_000300: 31
SIO_000628: feature:4658310-4658918:1:exon

position:4658310:1
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reference: sequence
type: ForwardStrandPosition
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fkbp15a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: fkbp15a
product: FKBP prolyl isomerase family member 15a, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048559076.1
SIO_010081: fkbp15a
subclass of: SO_0000673
so part of: fkbp15a
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location: region:4581594-4658918:1
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urn:…
SIO_000300: 1
SIO_000628: feature:4581594-4581794:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4592735-4592844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4594648-4594726:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4595167-4595236:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4595615-4595689:1:exon

urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
SIO_000628: feature:4598614-4598763:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4599206-4599274:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4602678-4602821:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4603349-4603491:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4607564-4607612:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4608111-4608227:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4612293-4612401:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4612806-4612900:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4615072-4615174:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4615481-4615590:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4620303-4620407:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4621117-4621211:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4625015-4625117:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4627129-4627161:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4632077-4632248:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4634208-4634344:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4634599-4634754:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4637088-4637240:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4645636-4645728:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4648413-4648535:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4651914-4652021:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4655197-4656050:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4657579-4657684:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4658310-4658918:1:exon

fkbp15a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: fkbp15a
product: FKBP prolyl isomerase family member 15a, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048559075.1
SIO_010081: fkbp15a
subclass of: SO_0000673
so part of: fkbp15a
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urn:…
SIO_000300: 1
SIO_000628: feature:4581594-4581794:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4592735-4592844:1:exon

urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
SIO_000628: feature:4595167-4595236:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4595615-4595689:1:exon

urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
SIO_000628: feature:4598614-4598763:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4599206-4599274:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4602678-4602821:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4603349-4603491:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4607564-4607612:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4608111-4608227:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4612293-4612401:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4612806-4612900:1:exon

urn:…
SIO_000300: 15
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urn:…
SIO_000300: 16
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urn:…
SIO_000300: 17
SIO_000628: feature:4620303-4620407:1:exon

urn:…
SIO_000300: 18
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urn:…
SIO_000300: 19
SIO_000628: feature:4625015-4625117:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4632077-4632248:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4634208-4634344:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4634599-4634754:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4635067-4635135:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4637088-4637240:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4645636-4645728:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4648413-4648535:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4651914-4652021:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4655197-4656050:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4657579-4657684:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4658310-4658918:1:exon

fkbp15a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: fkbp15a
product: FKBP prolyl isomerase family member 15a, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048559077.1
SIO_010081: fkbp15a
subclass of: SO_0000673
so part of: fkbp15a
location: join(4581594..4581794,4592735..4592844,4594648..4594726,4595167..4595236,4595615..4595689,4597851..4597949,4598614..4598763,4599206..4599274,4602678..4602821,4603349..4603491,4607564..4607612,4608111..4608227,4612293..4612401,4612806..4612900,4615072..4615174,4615481..4615590,4620303..4620407,4621117..4621211,4625015..4625117,4632077..4632248,4634208..4634344,4634599..4634754,4637088..4637240,4645636..4645728,4648413..4648535,4651914..4652021,4655197..4656050,4657579..4657684,4658310..4658918)
location: region:4581594-4658918:1
so has part: feature:4581594-4581794:1:exon
so has part: feature:4592735-4592844:1:exon
so has part: feature:4594648-4594726:1:exon
so has part: feature:4595167-4595236:1:exon
so has part: feature:4595615-4595689:1:exon
so has part: feature:4597851-4597949:1:exon
so has part: feature:4598614-4598763:1:exon
so has part: feature:4599206-4599274:1:exon
so has part: feature:4602678-4602821:1:exon
so has part: feature:4603349-4603491:1:exon
so has part: feature:4607564-4607612:1:exon
so has part: feature:4608111-4608227:1:exon
so has part: feature:4612293-4612401:1:exon
so has part: feature:4612806-4612900:1:exon
so has part: feature:4615072-4615174:1:exon
so has part: feature:4615481-4615590:1:exon
so has part: feature:4620303-4620407:1:exon
so has part: feature:4621117-4621211:1:exon
so has part: feature:4625015-4625117:1:exon
so has part: feature:4632077-4632248:1:exon
so has part: feature:4634208-4634344:1:exon
so has part: feature:4634599-4634754:1:exon
so has part: feature:4637088-4637240:1:exon
so has part: feature:4645636-4645728:1:exon
so has part: feature:4648413-4648535:1:exon
so has part: feature:4651914-4652021:1:exon
so has part: feature:4655197-4656050:1:exon
so has part: feature:4657579-4657684:1:exon
so has part: feature:4658310-4658918:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4581594-4581794:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4592735-4592844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4594648-4594726:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4595167-4595236:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4595615-4595689:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4597851-4597949:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4598614-4598763:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4599206-4599274:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4602678-4602821:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4603349-4603491:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4607564-4607612:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4608111-4608227:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4612293-4612401:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4612806-4612900:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4615072-4615174:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4615481-4615590:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4620303-4620407:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4621117-4621211:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4625015-4625117:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4632077-4632248:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4634208-4634344:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4634599-4634754:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4637088-4637240:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4645636-4645728:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4648413-4648535:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4651914-4652021:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4655197-4656050:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4657579-4657684:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4658310-4658918:1:exon

fkbp15a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: fkbp15a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FK506-binding protein 15 isoform X1
translation: MSLFGADEDDVDFLSPSGGSKLASLFGMDQVSAGQGNESFQYTAPKQPKRGTPPPGAGSQKPPATAAPPAVLFATAVHAYKYVNGQYVKQGKLGAAILGNHAAAEYKILLYASQQKRIAAARIYPAFTFTVQANNYCVFYDDQRQNWSAMFDSEKAVVEFSKQVCLAKCNSTSTLESVLIQDLAPGEGQAVETGDSLEVSYTGWLYQNHTFGQVFDTNVNRDKLLRLKIGSGKVIKGWEIGMLGMKKNGRRLLIVPPSLAYGSQGIPNRVPTNATLIFEVEVKRVKFAKESGFDKQSTSSHESTASSPAPSIESLATETAIPAPVSVPPKPGEHVVRAKSNSLSDALANPDTMKAKLISRMAKMGQPMPFLTGALSAQPDSSDSELEDHSLKAAPLAAPSPAPSSIPHTAHPVHNLPPQQPAPGSVSMHTSSSAALLPVTLSAQQGLAGSGQTFQPYTGISYGYPPGPAAQTQIQTVAPMFPAQAPQYQAAGDVTSFMMTEARQHNTEIRLAISKASDKIDQLSLKVDDLQKHLNGPSFPGISSVTMETSMIMHNIQRIIQENERLKQEVFDKSSRIEEQNGKISDLIQRNQRYVEQSNLLMEQRNDSLISSTENNQARILLAEQEKLALPVELARAQVKVTEELAVATSQVAKLQLELTSHQKKEMELRSQLASALQEAEGQRLRLNNVEVQLTELQEVSEHARTQCKAEKQSRKVLEVKVAGLEEELMDLRAERENLEKNLAERKRKAVTERQRAEEEMDEIRKSHEEELEKVRSLLKKTRTSTDQAAAEQQHRKLKCTTEPHERSNQPNWHQELAVMQAELDSQWQAKCDRMLALAKEQHNQQYQEVCELRDSQQLQISQLEAKLASLKQSRQVDEDRLMSFQEQAEELQALKERYSSLQSRAAAMKEHYDSQIRELQQQAPATNEALQSGDTAEEVKKIMNGVFQSLRGEFDLDEMYSGRAVLGVIVNTIKAVTLKLLRSGQDQLITESDNEDDESEEELEGRAAPPIEIKARTDTSERQNISALDEKQRTVAEADRISHVTLSSGHSAVATVKSERSEADGSKAMQLEQPEAALTSSLNVRTLAQSLPTADNQEATAETSRKGAIESPTEMKLKRSLSDCQSEKPHQQTEGPEHNRMPEKSLNPLDGVQQCELGNSSVLNSESATERQEEQSQAPNTESISRIQGEPLLSEPLQETAPALNGNEDSPDIPEGPVFESSESPSELDALHVAECGSSDTTSMPGLKPKSAPSTNASSLFSDDDDDEEGLFKAMTPKLGKVTKKEEEEEEDEVSMKGRPPPAPLFGDEDEEDDFDWLG
SIO_010081: fkbp15a
subclass of: SO_0000673
so part of: fkbp15a
location: join(4581739..4581794,4592735..4592844,4594648..4594726,4595167..4595236,4595615..4595689,4597851..4597949,4598614..4598763,4599206..4599274,4602678..4602821,4603349..4603491,4607564..4607612,4608111..4608227,4612293..4612401,4612806..4612900,4615072..4615174,4615481..4615590,4620303..4620407,4621117..4621211,4625015..4625117,4627129..4627161,4632077..4632248,4634208..4634344,4634599..4634754,4635067..4635135,4637088..4637240,4645636..4645728,4648413..4648535,4651914..4652021,4655197..4656050,4657579..4657684,4658310..4658387)
location: region:4581739-4658387:1
so has part: feature:4581739-4581794:1:exon
so has part: feature:4592735-4592844:1:exon
so has part: feature:4594648-4594726:1:exon
so has part: feature:4595167-4595236:1:exon
so has part: feature:4595615-4595689:1:exon
so has part: feature:4597851-4597949:1:exon
so has part: feature:4598614-4598763:1:exon
so has part: feature:4599206-4599274:1:exon
so has part: feature:4602678-4602821:1:exon
so has part: feature:4603349-4603491:1:exon
so has part: feature:4607564-4607612:1:exon
so has part: feature:4608111-4608227:1:exon
so has part: feature:4612293-4612401:1:exon
so has part: feature:4612806-4612900:1:exon
so has part: feature:4615072-4615174:1:exon
so has part: feature:4615481-4615590:1:exon
so has part: feature:4620303-4620407:1:exon
so has part: feature:4621117-4621211:1:exon
so has part: feature:4625015-4625117:1:exon
so has part: feature:4627129-4627161:1:exon
so has part: feature:4632077-4632248:1:exon
so has part: feature:4634208-4634344:1:exon
so has part: feature:4634599-4634754:1:exon
so has part: feature:4635067-4635135:1:exon
so has part: feature:4637088-4637240:1:exon
so has part: feature:4645636-4645728:1:exon
so has part: feature:4648413-4648535:1:exon
so has part: feature:4651914-4652021:1:exon
so has part: feature:4655197-4656050:1:exon
so has part: feature:4657579-4657684:1:exon
so has part: feature:4658310-4658387:1:exon

XP_048415030.1
type: Protein
SIO_000068: ncbiprotein

position:4581739:1
position: 4581739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4658387:1
position: 4658387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4581739-4581794:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4592735-4592844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4594648-4594726:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4595167-4595236:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4595615-4595689:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4597851-4597949:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4598614-4598763:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4599206-4599274:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4602678-4602821:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4603349-4603491:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4607564-4607612:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4608111-4608227:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4612293-4612401:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4612806-4612900:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4615072-4615174:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4615481-4615590:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4620303-4620407:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4621117-4621211:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4625015-4625117:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4627129-4627161:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4632077-4632248:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4634208-4634344:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4634599-4634754:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4635067-4635135:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4637088-4637240:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4645636-4645728:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4648413-4648535:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4651914-4652021:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4655197-4656050:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4657579-4657684:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4658310-4658387:1:exon

fkbp15a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: fkbp15a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FK506-binding protein 15 isoform X3
translation: MSLFGADEDDVDFLSPSGGSKLASLFGMDQVSAGQGNESFQYTAPKQPKRGTPPPGAGSQKPPATAAPPAVLFATAVHAYKYVNGQYVKQGKLGAAILGNHAAAEYKILLYASQQKRIAAARIYPAFTFTVQANNYCVFYDDQRQNWSAMFDSEKAVVEFSKQVCLAKCNSTSTLESVLIQDLAPGEGQAVETGDSLEVSYTGWLYQNHTFGQVFDTNVNRDKLLRLKIGSGKVIKGWEIGMLGMKKNGRRLLIVPPSLAYGSQGIPNRVPTNATLIFEVEVKRVKFAKESGFDKQSTSSHESTASSPAPSIESLATETAIPAPVSVPPKPGEHVVRAKSNSLSDALANPDTMKAKLISRMAKMGQPMPFLTGALSAQPDSSDSELEDHSLKAAPLAAPSPAPSSIPHTAHPVHNLPPQQPAPGSVSMHTSSSAALLPVTLSAQQGLAGSGQTFQPYTGISYGYPPGPAAQTQIQTVAPMFPAQAPQYQAAGDVTSFMMTEARQHNTEIRLAISKASDKIDQLSLKVDDLQKHLNGPSFPGISSVTMETSMIMHNIQRIIQENERLKQEVFDKSSRIEEQNGKISDLIQRNQRYVEQSNLLMEQRNDSLISSTENNQARILLAEQEKLALPVELARAQVKVTEELAVATSQVAKLQLELTSHQKKEMELRSQLASALQEAEGQRLRLNNVEVQLTELQEVSEHARTQCKAEKQSRKVLEVKVAGLEEELMDLRAERENLEKNLAERKRKAVTERQRAEEEMDEIRKSHEEELEKVRSLLKKTRTSTDQAAAEQLAVMQAELDSQWQAKCDRMLALAKEQHNQQYQEVCELRDSQQLQISQLEAKLASLKQSRQVDEDRLMSFQEQAEELQALKERYSSLQSRAAAMKEHYDSQIRELQQQAPATNEALQSGDTAEEVKKIMNGVFQSLRGEFDLDEMYSGRAVLGVIVNTIKAVTLKLLRSGQDQLITESDNEDDESEEELEGRAAPPIEIKARTDTSERQNISALDEKQRTVAEADRISHVTLSSGHSAVATVKSERSEADGSKAMQLEQPEAALTSSLNVRTLAQSLPTADNQEATAETSRKGAIESPTEMKLKRSLSDCQSEKPHQQTEGPEHNRMPEKSLNPLDGVQQCELGNSSVLNSESATERQEEQSQAPNTESISRIQGEPLLSEPLQETAPALNGNEDSPDIPEGPVFESSESPSELDALHVAECGSSDTTSMPGLKPKSAPSTNASSLFSDDDDDEEGLFKAMTPKLGKVTKKEEEEEEDEVSMKGRPPPAPLFGDEDEEDDFDWLG
SIO_010081: fkbp15a
subclass of: SO_0000673
so part of: fkbp15a
location: join(4581739..4581794,4592735..4592844,4594648..4594726,4595167..4595236,4595615..4595689,4597851..4597949,4598614..4598763,4599206..4599274,4602678..4602821,4603349..4603491,4607564..4607612,4608111..4608227,4612293..4612401,4612806..4612900,4615072..4615174,4615481..4615590,4620303..4620407,4621117..4621211,4625015..4625117,4627129..4627161,4632077..4632248,4634208..4634344,4634599..4634754,4637088..4637240,4645636..4645728,4648413..4648535,4651914..4652021,4655197..4656050,4657579..4657684,4658310..4658387)
location: region:4581739-4658387:1
so has part: feature:4581739-4581794:1:exon
so has part: feature:4592735-4592844:1:exon
so has part: feature:4594648-4594726:1:exon
so has part: feature:4595167-4595236:1:exon
so has part: feature:4595615-4595689:1:exon
so has part: feature:4597851-4597949:1:exon
so has part: feature:4598614-4598763:1:exon
so has part: feature:4599206-4599274:1:exon
so has part: feature:4602678-4602821:1:exon
so has part: feature:4603349-4603491:1:exon
so has part: feature:4607564-4607612:1:exon
so has part: feature:4608111-4608227:1:exon
so has part: feature:4612293-4612401:1:exon
so has part: feature:4612806-4612900:1:exon
so has part: feature:4615072-4615174:1:exon
so has part: feature:4615481-4615590:1:exon
so has part: feature:4620303-4620407:1:exon
so has part: feature:4621117-4621211:1:exon
so has part: feature:4625015-4625117:1:exon
so has part: feature:4627129-4627161:1:exon
so has part: feature:4632077-4632248:1:exon
so has part: feature:4634208-4634344:1:exon
so has part: feature:4634599-4634754:1:exon
so has part: feature:4637088-4637240:1:exon
so has part: feature:4645636-4645728:1:exon
so has part: feature:4648413-4648535:1:exon
so has part: feature:4651914-4652021:1:exon
so has part: feature:4655197-4656050:1:exon
so has part: feature:4657579-4657684:1:exon
so has part: feature:4658310-4658387:1:exon

XP_048415033.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4581739-4581794:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4592735-4592844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4594648-4594726:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4595167-4595236:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4595615-4595689:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4597851-4597949:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4598614-4598763:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4599206-4599274:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4602678-4602821:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4603349-4603491:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4607564-4607612:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4608111-4608227:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4612293-4612401:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4612806-4612900:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4615072-4615174:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4615481-4615590:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4620303-4620407:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4621117-4621211:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4625015-4625117:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4627129-4627161:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4632077-4632248:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4634208-4634344:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4634599-4634754:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4637088-4637240:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4645636-4645728:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4648413-4648535:1:exon