Stegostoma fasciatum isolate 6-17 chromosome 27, sSteFas1.1, whole genome shotgun sequence.
type: Entry
definition: Stegostoma fasciatum isolate 6-17 chromosome 27, sSteFas1.1, whole genome shotgun sequence.
sequence version: NC_063410.1
sequence date: 2022-06-06
sequence: sequence
division: CON
label: NC_063410.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA844100
dblink: SAMN18022887
keyword: WGS
keyword: RefSeq
source: Stegostoma fasciatum
organism: Stegostoma fasciatum
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Stegostomatidae; Stegostoma.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM039253.1.\nAssembly name: sSteFas1.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Squalomix on 2022/02/17. The\noriginal whole-genome shotgun project has the accession\nJAFIRC000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Squalomix\nAssembly Date :: 22-FEB-2021\nAssembly Method :: Platanus v. 1.2.4; P_RNA_scaffolder v.\n commit 7941e0f on May 30, at github;\n 3D-DNA v. 180922\nAssembly Name :: sSteFas1.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 95.8x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Stegostoma fasciatum Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 46618698
topology: linear
so has quality: SO_0000987
location: 1..46618698
location: region:1-46618698:1
RO_0002162: 378071

NC_063410
type: RefSeq
SIO_000068: refseq

PRJNA844100
type: BioProject
SIO_000068: bioproject

SAMN18022887
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46618698:1
position: 46618698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-46618698:1:source
so part of: sequence
organism: Stegostoma fasciatum
mol type: genomic DNA
isolate: 6-17
chromosome: 27
sex: female
tissue type: blood
dev stage: adult
collection date: 2019-07-11

378071
type: Taxonomy
SIO_000068: taxonomy

LOC125465071
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125465071
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(88771..263798)
location: region:88771-263798:-1
so has part: feature:88771-263798:-1:exon
subclass of: SO_0000010

125465071
type: Gene
SIO_000068: ncbigene

position:88771:-1
position: 88771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263798:-1
position: 263798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88771-263798:-1:exon

LOC125465071
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465071
product: granulocyte colony-stimulating factor receptor-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048558159.1
SIO_010081: LOC125465071
subclass of: SO_0000673
so part of: LOC125465071
location: complement(join(88771..90450,100179..100260,111849..111945,116507..116647,119678..119824,140121..140306,152984..153206,164965..165047,181219..181372,182725..182870,187274..187464,210846..210972,215405..215716,241732..241817,263457..263798))
location: region:88771-263798:-1
so has part: feature:263457-263798:-1:exon
so has part: feature:241732-241817:-1:exon
so has part: feature:215405-215716:-1:exon
so has part: feature:210846-210972:-1:exon
so has part: feature:187274-187464:-1:exon
so has part: feature:182725-182870:-1:exon
so has part: feature:181219-181372:-1:exon
so has part: feature:164965-165047:-1:exon
so has part: feature:152984-153206:-1:exon
so has part: feature:140121-140306:-1:exon
so has part: feature:119678-119824:-1:exon
so has part: feature:116507-116647:-1:exon
so has part: feature:111849-111945:-1:exon
so has part: feature:100179-100260:-1:exon
so has part: feature:88771-90450:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:263457-263798:-1:exon

position:263457:-1
position: 263457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:241732-241817:-1:exon

position:241732:-1
position: 241732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241817:-1
position: 241817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:215405-215716:-1:exon

position:215405:-1
position: 215405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215716:-1
position: 215716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:210846-210972:-1:exon

position:210846:-1
position: 210846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210972:-1
position: 210972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:187274-187464:-1:exon

position:187274:-1
position: 187274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187464:-1
position: 187464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:182725-182870:-1:exon

position:182725:-1
position: 182725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182870:-1
position: 182870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:181219-181372:-1:exon

position:181219:-1
position: 181219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181372:-1
position: 181372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:164965-165047:-1:exon

position:164965:-1
position: 164965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165047:-1
position: 165047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:152984-153206:-1:exon

position:152984:-1
position: 152984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153206:-1
position: 153206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:140121-140306:-1:exon

position:140121:-1
position: 140121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140306:-1
position: 140306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:119678-119824:-1:exon

position:119678:-1
position: 119678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119824:-1
position: 119824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:116507-116647:-1:exon

position:116507:-1
position: 116507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116647:-1
position: 116647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:111849-111945:-1:exon

position:111849:-1
position: 111849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111945:-1
position: 111945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:100179-100260:-1:exon

position:100179:-1
position: 100179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100260:-1
position: 100260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:88771-90450:-1:exon

position:90450:-1
position: 90450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125465071
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465071
product: granulocyte colony-stimulating factor receptor-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_048558158.1
SIO_010081: LOC125465071
subclass of: SO_0000673
so part of: LOC125465071
location: complement(join(88771..90450,100179..100260,111849..111945,116507..116647,119678..119824,125995..126096,140121..140306,152984..153206,164965..165047,181219..181372,182725..182870,187274..187464,210846..210972,215405..215716,241732..241817,263457..263798))
location: region:88771-263798:-1
so has part: feature:263457-263798:-1:exon
so has part: feature:241732-241817:-1:exon
so has part: feature:215405-215716:-1:exon
so has part: feature:210846-210972:-1:exon
so has part: feature:187274-187464:-1:exon
so has part: feature:182725-182870:-1:exon
so has part: feature:181219-181372:-1:exon
so has part: feature:164965-165047:-1:exon
so has part: feature:152984-153206:-1:exon
so has part: feature:140121-140306:-1:exon
so has part: feature:125995-126096:-1:exon
so has part: feature:119678-119824:-1:exon
so has part: feature:116507-116647:-1:exon
so has part: feature:111849-111945:-1:exon
so has part: feature:100179-100260:-1:exon
so has part: feature:88771-90450:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:263457-263798:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:241732-241817:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:215405-215716:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:210846-210972:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:187274-187464:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:182725-182870:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:181219-181372:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:164965-165047:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:152984-153206:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:140121-140306:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:125995-126096:-1:exon

position:125995:-1
position: 125995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126096:-1
position: 126096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:119678-119824:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:116507-116647:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:111849-111945:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:100179-100260:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:88771-90450:-1:exon

LOC125465071
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465071
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: granulocyte colony-stimulating factor receptor-like isoform X2
translation: MWKSVDSTYLLGFLFYLLIPHTGVLSDAHECLRISLNANPVHLGSSLVATCKIINTSCLMGSIAHASEILWQHDNVYIDKTQYTIVEKTMSQVNISAFNQTVGNLSCQIPQGSEGILQNDVQIQAGFPPEKPTNLTCVTSWKEKISMTCSWDPGRDSYIRTTYTLRRIKNLGKCHNHEMDAKWNDCLSQDSHSCTVPRDKLRLFSTDDIFVLAKNELGSQVSDVLCLDAMDVVKLEQPVDPIIQGDPRSSNCLILRWRIRIKPHIQCQLQYREHSESAWRQILAFKELQKEERLCQLSPGTEYLIRMRCKLSGTTQYWSDWSTEYSGRTAESPPVGTPDVWWHFEGSAQDEKMHIRIFWKELRESEMNGRIQGYRVTYGCEPDANHPEVTLCNTTSLSCRISTPKGDGNICVRAYNTAGHSPAALLALPTLYQTDIAALHPHVNIIPITEHSLQINWTLLSIPVLGYIVEWCKMSEYSCEINWKKVSADSTSSVLQAPLTGPKVTASRIWKSKAEVIWEEIPINKRQGFIRNYTIFYSDKTGLVQHIVRNELEKRYVLTGLRAATDYEVTVMATTDAGGTNSSVLNLTTKKSDDENIVIIIAWLFLILLLLMSVLLLMYFLYKKMSTGQLWPKIPNPANSALASWSPGRQSQDWNSLEGAPDHVVSSVTLLQRDERQNTAFGAKSNPLLDDENVLNVDVNIKSTSGVATLHCCSEGHNYVVYMSYHNHSEEAQYATVLHSKGPPTLFLRSDSTQPLLHELTPSPKLYENPWFTTSATNDSESSQDISLSGVTVEEEEIWKTFPLLWGLVSEHKAD
SIO_010081: LOC125465071
subclass of: SO_0000673
so part of: LOC125465071
location: complement(join(89959..90450,100179..100260,111849..111945,116507..116647,119678..119824,140121..140306,152984..153206,164965..165047,181219..181372,182725..182870,187274..187464,210846..210972,215405..215716,241732..241798))
location: region:89959-241798:-1
so has part: feature:241732-241798:-1:exon
so has part: feature:215405-215716:-1:exon
so has part: feature:210846-210972:-1:exon
so has part: feature:187274-187464:-1:exon
so has part: feature:182725-182870:-1:exon
so has part: feature:181219-181372:-1:exon
so has part: feature:164965-165047:-1:exon
so has part: feature:152984-153206:-1:exon
so has part: feature:140121-140306:-1:exon
so has part: feature:119678-119824:-1:exon
so has part: feature:116507-116647:-1:exon
so has part: feature:111849-111945:-1:exon
so has part: feature:100179-100260:-1:exon
so has part: feature:89959-90450:-1:exon

XP_048414116.1
type: Protein
SIO_000068: ncbiprotein

position:89959:-1
position: 89959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241798:-1
position: 241798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241732-241798:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:215405-215716:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:210846-210972:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:187274-187464:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:182725-182870:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:181219-181372:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:164965-165047:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:152984-153206:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:140121-140306:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:119678-119824:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:116507-116647:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:111849-111945:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:100179-100260:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:89959-90450:-1:exon

LOC125465071
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465071
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: granulocyte colony-stimulating factor receptor-like isoform X1
translation: MWKSVDSTYLLGFLFYLLIPHTGVLSDAHECLRISLNANPVHLGSSLVATCKIINTSCLMGSIAHASEILWQHDNVYIDKTQYTIVEKTMSQVNISAFNQTVGNLSCQIPQGSEGILQNDVQIQAGFPPEKPTNLTCVTSWKEKISMTCSWDPGRDSYIRTTYTLRRIKNLGKCHNHEMDAKWNDCLSQDSHSCTVPRDKLRLFSTDDIFVLAKNELGSQVSDVLCLDAMDVVKLEQPVDPIIQGDPRSSNCLILRWRIRIKPHIQCQLQYREHSESAWRQILAFKELQKEERLCQLSPGTEYLIRMRCKLSGTTQYWSDWSTEYSGRTAESPPVGTPDVWWHFEGSAQDEKMHIRIFWKELRESEMNGRIQGYRVTYGCEPDANHPEVTLCNTTSLSCRISTPKGDGNICVRAYNTAGHSPAALLALPTLYQTDIAALHPHVNIIPITEHSLQINWTLLSIPVLGYIVEWCKMSEYSCEINWKKVSADSTSSVLQENIEPMKCYAISIYPLLFKGLAVPYSTEAYSKQGAPLTGPKVTASRIWKSKAEVIWEEIPINKRQGFIRNYTIFYSDKTGLVQHIVRNELEKRYVLTGLRAATDYEVTVMATTDAGGTNSSVLNLTTKKSDDENIVIIIAWLFLILLLLMSVLLLMYFLYKKMSTGQLWPKIPNPANSALASWSPGRQSQDWNSLEGAPDHVVSSVTLLQRDERQNTAFGAKSNPLLDDENVLNVDVNIKSTSGVATLHCCSEGHNYVVYMSYHNHSEEAQYATVLHSKGPPTLFLRSDSTQPLLHELTPSPKLYENPWFTTSATNDSESSQDISLSGVTVEEEEIWKTFPLLWGLVSEHKAD
SIO_010081: LOC125465071
subclass of: SO_0000673
so part of: LOC125465071
location: complement(join(89959..90450,100179..100260,111849..111945,116507..116647,119678..119824,125995..126096,140121..140306,152984..153206,164965..165047,181219..181372,182725..182870,187274..187464,210846..210972,215405..215716,241732..241798))
location: region:89959-241798:-1
so has part: feature:241732-241798:-1:exon
so has part: feature:215405-215716:-1:exon
so has part: feature:210846-210972:-1:exon
so has part: feature:187274-187464:-1:exon
so has part: feature:182725-182870:-1:exon
so has part: feature:181219-181372:-1:exon
so has part: feature:164965-165047:-1:exon
so has part: feature:152984-153206:-1:exon
so has part: feature:140121-140306:-1:exon
so has part: feature:125995-126096:-1:exon
so has part: feature:119678-119824:-1:exon
so has part: feature:116507-116647:-1:exon
so has part: feature:111849-111945:-1:exon
so has part: feature:100179-100260:-1:exon
so has part: feature:89959-90450:-1:exon

XP_048414115.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:241732-241798:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:215405-215716:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:210846-210972:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:187274-187464:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:182725-182870:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:181219-181372:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:164965-165047:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:152984-153206:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:140121-140306:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:125995-126096:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:119678-119824:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:116507-116647:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:111849-111945:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:100179-100260:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:89959-90450:-1:exon

LOC125464952
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125464952
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 312032..371165
location: region:312032-371165:1
so has part: feature:312032-371165:1:exon
subclass of: SO_0000010

125464952
type: Gene
SIO_000068: ncbigene

position:312032:1
position: 312032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371165:1
position: 371165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312032-371165:1:exon

LOC125464952
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125464952
product: cytosolic 5'-nucleotidase 1A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_048557915.1
SIO_010081: LOC125464952
subclass of: SO_0000673
so part of: LOC125464952
location: join(312032..312166,312882..313049,328694..328823,339130..339252,367565..367749,368169..371165)
location: region:312032-371165:1
so has part: feature:312032-312166:1:exon
so has part: feature:312882-313049:1:exon
so has part: feature:328694-328823:1:exon
so has part: feature:339130-339252:1:exon
so has part: feature:367565-367749:1:exon
so has part: feature:368169-371165:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:312032-312166:1:exon

position:312166:1
position: 312166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:312882-313049:1:exon

position:312882:1
position: 312882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313049:1
position: 313049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:328694-328823:1:exon

position:328694:1
position: 328694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328823:1
position: 328823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:339130-339252:1:exon

position:339130:1
position: 339130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339252:1
position: 339252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:367565-367749:1:exon

position:367565:1
position: 367565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367749:1
position: 367749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:368169-371165:1:exon

position:368169:1
position: 368169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125464952
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125464952
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytosolic 5'-nucleotidase 1A-like
translation: MEPAVDIAAPAAITNLSPRKKPRTPSPEYATTIAVSSRALFNMEEETKIFDKDGVEAYVRHQMKHENEPFGPGAAFPFVQAIEAVNEQLRDLYPASDELFDIVLVTNNHAQVGVRLINSINHYGLSIERFCMTGGKSPIEYLKAYHTNLYLSADSEKVQEAIEQGIAAATIFSPNKDVSVSERQLRVAFDGDAVLFSDESEQIVKEHGLDKFFEHEQTNENKPLAMGPLKGFLESLGKLQKKFYAKGQRLKCPIRTYLVTARSAASSGARALKTLRSWGLETDEALFLAGAPKGPLLQKIRPHIFFDDQMFHVEGAKELGTIAAHVPYGASQRYKVEE
SIO_010081: LOC125464952
subclass of: SO_0000673
so part of: LOC125464952
location: join(312095..312166,312882..313049,328694..328823,339130..339252,367565..367749,368169..368507)
location: region:312095-368507:1
so has part: feature:312095-312166:1:exon
so has part: feature:312882-313049:1:exon
so has part: feature:328694-328823:1:exon
so has part: feature:339130-339252:1:exon
so has part: feature:367565-367749:1:exon
so has part: feature:368169-368507:1:exon

XP_048413872.1
type: Protein
SIO_000068: ncbiprotein

position:312095:1
position: 312095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:368507:1
position: 368507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312095-312166:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:312882-313049:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:328694-328823:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:339130-339252:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:367565-367749:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:368169-368507:1:exon

nipal3
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: nipal3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(376192..445532)
location: region:376192-445532:-1
so has part: feature:376192-445532:-1:exon
subclass of: SO_0000010

125464951
type: Gene
SIO_000068: ncbigene

position:376192:-1
position: 376192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:445532:-1
position: 445532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376192-445532:-1:exon

nipal3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: nipal3
product: NIPA like domain containing 3, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048557913.1
SIO_010081: nipal3
subclass of: SO_0000673
so part of: nipal3
location: complement(join(376192..378174,381219..381310,404276..404339,405386..405474,407128..407263,409054..409150,409470..409615,412896..412955,413214..413385,434330..434398,445448..445532))
location: region:376192-445532:-1
so has part: feature:445448-445532:-1:exon
so has part: feature:434330-434398:-1:exon
so has part: feature:413214-413385:-1:exon
so has part: feature:412896-412955:-1:exon
so has part: feature:409470-409615:-1:exon
so has part: feature:409054-409150:-1:exon
so has part: feature:407128-407263:-1:exon
so has part: feature:405386-405474:-1:exon
so has part: feature:404276-404339:-1:exon
so has part: feature:381219-381310:-1:exon
so has part: feature:376192-378174:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:445448-445532:-1:exon

position:445448:-1
position: 445448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:434330-434398:-1:exon

position:434330:-1
position: 434330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434398:-1
position: 434398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:413214-413385:-1:exon

position:413214:-1
position: 413214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413385:-1
position: 413385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:412896-412955:-1:exon

position:412896:-1
position: 412896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412955:-1
position: 412955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:409470-409615:-1:exon

position:409470:-1
position: 409470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409615:-1
position: 409615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:409054-409150:-1:exon

position:409054:-1
position: 409054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409150:-1
position: 409150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:407128-407263:-1:exon

position:407128:-1
position: 407128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:407263:-1
position: 407263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:405386-405474:-1:exon

position:405386:-1
position: 405386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:405474:-1
position: 405474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:404276-404339:-1:exon

position:404276:-1
position: 404276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404339:-1
position: 404339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:381219-381310:-1:exon

position:381219:-1
position: 381219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381310:-1
position: 381310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:376192-378174:-1:exon

position:378174:-1
position: 378174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

nipal3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: nipal3
product: NIPA like domain containing 3, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048557914.1
SIO_010081: nipal3
subclass of: SO_0000673
so part of: nipal3
location: complement(join(376192..378174,381219..381310,404276..404339,405386..405474,407128..407263,409054..409150,409470..409615,412896..412955,413214..413385,445448..445526))
location: region:376192-445526:-1
so has part: feature:445448-445526:-1:exon
so has part: feature:413214-413385:-1:exon
so has part: feature:412896-412955:-1:exon
so has part: feature:409470-409615:-1:exon
so has part: feature:409054-409150:-1:exon
so has part: feature:407128-407263:-1:exon
so has part: feature:405386-405474:-1:exon
so has part: feature:404276-404339:-1:exon
so has part: feature:381219-381310:-1:exon
so has part: feature:376192-378174:-1:exon

position:445526:-1
position: 445526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445448-445526:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:413214-413385:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:412896-412955:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:409470-409615:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:409054-409150:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:407128-407263:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:405386-405474:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:404276-404339:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:381219-381310:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:376192-378174:-1:exon

nipal3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: nipal3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NIPA-like protein 3 isoform X1
translation: MTCQLAVRGLECVMERDAGGFLSDSSYKENLIGTLLAIFGNLVISISLNVQKYSHVRLSGTKDPRSYFRTKTWWLGLVLMLLGELGVFTSYAYAPLSLVTPLSAVSIVASSILGILFLRDKWKPRQFLRRYVLSFLGCALTVIGIYLLVTFGPNTHEELSSRNLELHLLGWPFLLYLLVVIVIFCLLLYFYKRQNMAYLVIILLLVALLGSVTVVAAKGVSGMIILSIQGDVQLVYPIFYVMLVCMIAAAVYQAAFLREISELYDASQIASLSYMLSTTIAVIAGATFYLEFKGTDALHICMFIFGSCIAFLGVFLITQSKKKKIFEPYVMMDVISGLRTMFDKKSPVQPELSGSFSYGTLENSNNPVDNQLLEAHQEPHSVHSVTEPKLD
SIO_010081: nipal3
subclass of: SO_0000673
so part of: nipal3
location: complement(join(378008..378174,381219..381310,404276..404339,405386..405474,407128..407263,409054..409150,409470..409615,412896..412955,413214..413385,434330..434398,445448..445531))
location: region:378008-445531:-1
so has part: feature:445448-445531:-1:exon
so has part: feature:434330-434398:-1:exon
so has part: feature:413214-413385:-1:exon
so has part: feature:412896-412955:-1:exon
so has part: feature:409470-409615:-1:exon
so has part: feature:409054-409150:-1:exon
so has part: feature:407128-407263:-1:exon
so has part: feature:405386-405474:-1:exon
so has part: feature:404276-404339:-1:exon
so has part: feature:381219-381310:-1:exon
so has part: feature:378008-378174:-1:exon

XP_048413870.1
type: Protein
SIO_000068: ncbiprotein

position:378008:-1
position: 378008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:445531:-1
position: 445531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445448-445531:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:434330-434398:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:413214-413385:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:412896-412955:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:409470-409615:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:409054-409150:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:407128-407263:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:405386-405474:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:404276-404339:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:381219-381310:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:378008-378174:-1:exon

nipal3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: nipal3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NIPA-like protein 3 isoform X2
translation: MERDAGGFLSDSSYKKYSHVRLSGTKDPRSYFRTKTWWLGLVLMLLGELGVFTSYAYAPLSLVTPLSAVSIVASSILGILFLRDKWKPRQFLRRYVLSFLGCALTVIGIYLLVTFGPNTHEELSSRNLELHLLGWPFLLYLLVVIVIFCLLLYFYKRQNMAYLVIILLLVALLGSVTVVAAKGVSGMIILSIQGDVQLVYPIFYVMLVCMIAAAVYQAAFLREISELYDASQIASLSYMLSTTIAVIAGATFYLEFKGTDALHICMFIFGSCIAFLGVFLITQSKKKKIFEPYVMMDVISGLRTMFDKKSPVQPELSGSFSYGTLENSNNPVDNQLLEAHQEPHSVHSVTEPKLD
SIO_010081: nipal3
subclass of: SO_0000673
so part of: nipal3
location: complement(join(378008..378174,381219..381310,404276..404339,405386..405474,407128..407263,409054..409150,409470..409615,412896..412955,413214..413385,445448..445492))
location: region:378008-445492:-1
so has part: feature:445448-445492:-1:exon
so has part: feature:413214-413385:-1:exon
so has part: feature:412896-412955:-1:exon
so has part: feature:409470-409615:-1:exon
so has part: feature:409054-409150:-1:exon
so has part: feature:407128-407263:-1:exon
so has part: feature:405386-405474:-1:exon
so has part: feature:404276-404339:-1:exon
so has part: feature:381219-381310:-1:exon
so has part: feature:378008-378174:-1:exon

XP_048413871.1
type: Protein
SIO_000068: ncbiprotein

position:445492:-1
position: 445492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445448-445492:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:413214-413385:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:412896-412955:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:409470-409615:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:409054-409150:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:407128-407263:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:405386-405474:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:404276-404339:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:381219-381310:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:378008-378174:-1:exon

LOC125464870
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125464870
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 478272..479720
location: region:478272-479720:1
so has part: feature:478272-479720:1:exon
subclass of: SO_0000010

125464870
type: Gene
SIO_000068: ncbigene

position:478272:1
position: 478272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479720:1
position: 479720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:478272-479720:1:exon

LOC125464870
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125464870
product: potassium voltage-gated channel subfamily S member 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 24% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048557733.1
SIO_010081: LOC125464870
subclass of: SO_0000673
so part of: LOC125464870
location: 478272..479720
location: region:478272-479720:1
so has part: feature:478272-479720:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:478272-479720:1:exon

LOC125464870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125464870
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium voltage-gated channel subfamily S member 3-like
translation: MVYGQFYHRDRLYLEMININVGGLKQKVEQKALLKFPETRLGKLLRCSSREDTLELCDDYDVHTDEYYFDRNPSFFHYVLNFYSTGKLHVMEGICIFSFNQEIEYWGIGEISIHHCCRFKYHERKENIVEKEFDTQSDDLSLTGSEDASTIPQQMESFKRMLCGKQREKLWLILENPEYSFAAKAFTISSLAIVLLSIVTMCVHSLPEFHEQQEGLGFLIVESTCIAWFSFEYVARLMVAPYICKFLQNPLNIIDFLSFLPFYLTLAVERIDDESSELVNIGRVVQVLRLMRIFRVLKLARHSIGLRSLGATFRHSYEEVGLLIVFLTVGIAIFSALIYSSEKDEKETGLHSIPIGWWWATISMTTVGYGDTYPVTIQGKLIGSICIIFGLLMVALPVSVIFNRFSKYYRREQAIDVVIRNQELRKLAAGIPCVNIRDIYVKKIRLSSKIDTVDQNRVCCEKQSSLVSSNKQHVDTEQCSQK
SIO_010081: LOC125464870
subclass of: SO_0000673
so part of: LOC125464870
location: 478272..479720
location: region:478272-479720:1
so has part: feature:478272-479720:1:exon

XP_048413690.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:478272-479720:1:exon

LOC125464851
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125464851
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(524634..623818)
location: region:524634-623818:-1
so has part: feature:524634-623818:-1:exon
subclass of: SO_0000010

125464851
type: Gene
SIO_000068: ncbigene

position:524634:-1
position: 524634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623818:-1
position: 623818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:524634-623818:-1:exon

LOC125464851
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125464851
product: nuclear GTPase SLIP-GC-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048557693.1
SIO_010081: LOC125464851
subclass of: SO_0000673
so part of: LOC125464851
location: complement(join(524634..524675,536185..536302,537845..537964,538048..538084,540823..541001,558497..558706,575430..575537,623744..623818))
location: region:524634-623818:-1
so has part: feature:623744-623818:-1:exon
so has part: feature:575430-575537:-1:exon
so has part: feature:558497-558706:-1:exon
so has part: feature:540823-541001:-1:exon
so has part: feature:538048-538084:-1:exon
so has part: feature:537845-537964:-1:exon
so has part: feature:536185-536302:-1:exon
so has part: feature:524634-524675:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:623744-623818:-1:exon

position:623744:-1
position: 623744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:575430-575537:-1:exon

position:575430:-1
position: 575430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575537:-1
position: 575537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:558497-558706:-1:exon

position:558497:-1
position: 558497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:558706:-1
position: 558706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:540823-541001:-1:exon

position:540823:-1
position: 540823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541001:-1
position: 541001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:538048-538084:-1:exon

position:538048:-1
position: 538048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:538084:-1
position: 538084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:537845-537964:-1:exon

position:537845:-1
position: 537845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537964:-1
position: 537964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:536185-536302:-1:exon

position:536185:-1
position: 536185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:536302:-1
position: 536302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:524634-524675:-1:exon

position:524675:-1
position: 524675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125464851
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125464851
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear GTPase SLIP-GC-like
translation: MSQKKIVNCGTTDWNDESKLLVELYEKEDNDDEDDKEVEKAKDKLQTVYGDGGPEKSYEELVKMNIYQDIPKSGKMTFSEDTNLSNCSSDWIVSVISRAVDEKIAHEIFGASIKCAINGGRCHDVAFICTKTDDIEWQEYAREQHLTNEDMNLTDDDQLLENNIKQKRYCIRHHNEQVKKIMGKQNEAKWAKQMSKGSTQLEF
SIO_010081: LOC125464851
subclass of: SO_0000673
so part of: LOC125464851
location: complement(join(536273..536302,537845..537964,538048..538084,540823..541001,558497..558706,575430..575465))
location: region:536273-575465:-1
so has part: feature:575430-575465:-1:exon
so has part: feature:558497-558706:-1:exon
so has part: feature:540823-541001:-1:exon
so has part: feature:538048-538084:-1:exon
so has part: feature:537845-537964:-1:exon
so has part: feature:536273-536302:-1:exon

XP_048413650.1
type: Protein
SIO_000068: ncbiprotein

position:536273:-1
position: 536273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575465:-1
position: 575465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:575430-575465:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:558497-558706:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:540823-541001:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:538048-538084:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:537845-537964:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:536273-536302:-1:exon

LOC125464852
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125464852
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 543298..563168
location: region:543298-563168:1
so has part: feature:543298-563168:1:exon
subclass of: SO_0000011

125464852
type: Gene
SIO_000068: ncbigene

position:543298:1
position: 543298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:563168:1
position: 563168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:543298-563168:1:exon

LOC125464852
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 378071
nc RNA class: lncRNA
gene: LOC125464852
product: uncharacterized LOC125464852
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_007250107.1
SIO_010081: LOC125464852
subclass of: SO_0000673
so part of: LOC125464852
location: join(543298..543412,562226..562333,563042..563168)
location: region:543298-563168:1
so has part: feature:543298-543412:1:exon
so has part: feature:562226-562333:1:exon
so has part: feature:563042-563168:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:543298-543412:1:exon

position:543412:1
position: 543412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:562226-562333:1:exon

position:562226:1
position: 562226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562333:1
position: 562333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:563042-563168:1:exon

position:563042:1
position: 563042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125464850
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125464850
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 623790..647505
location: region:623790-647505:1
so has part: feature:623790-647505:1:exon
subclass of: SO_0000010

125464850
type: Gene
SIO_000068: ncbigene

position:623790:1
position: 623790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:647505:1
position: 647505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623790-647505:1:exon

LOC125464850
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125464850
product: uncharacterized LOC125464850, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_048557691.1
SIO_010081: LOC125464850
subclass of: SO_0000673
so part of: LOC125464850
location: join(623790..623885,626193..627206,637304..637387,641606..641897,644142..644307,644438..647505)
location: region:623790-647505:1
so has part: feature:623790-623885:1:exon
so has part: feature:626193-627206:1:exon
so has part: feature:637304-637387:1:exon
so has part: feature:641606-641897:1:exon
so has part: feature:644142-644307:1:exon
so has part: feature:644438-647505:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:623790-623885:1:exon

position:623885:1
position: 623885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:626193-627206:1:exon

position:626193:1
position: 626193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:627206:1
position: 627206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:637304-637387:1:exon

position:637304:1
position: 637304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:637387:1
position: 637387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:641606-641897:1:exon

position:641606:1
position: 641606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:641897:1
position: 641897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:644142-644307:1:exon

position:644142:1
position: 644142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:644307:1
position: 644307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:644438-647505:1:exon

position:644438:1
position: 644438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125464850
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125464850
product: uncharacterized LOC125464850, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_048557689.1
SIO_010081: LOC125464850
subclass of: SO_0000673
so part of: LOC125464850
location: join(623799..623885,626189..627206,637304..637387,641606..641897,644142..644307,644438..647505)
location: region:623799-647505:1
so has part: feature:623799-623885:1:exon
so has part: feature:626189-627206:1:exon
so has part: feature:637304-637387:1:exon
so has part: feature:641606-641897:1:exon
so has part: feature:644142-644307:1:exon
so has part: feature:644438-647505:1:exon

position:623799:1
position: 623799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623799-623885:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:626189-627206:1:exon

position:626189:1
position: 626189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:637304-637387:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:641606-641897:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:644142-644307:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:644438-647505:1:exon

LOC125464850
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125464850
product: uncharacterized LOC125464850, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048557690.1
SIO_010081: LOC125464850
subclass of: SO_0000673
so part of: LOC125464850
location: join(623861..623885,625408..625435,626189..627206,637304..637387,641606..641897,644142..644307,644438..647505)
location: region:623861-647505:1
so has part: feature:623861-623885:1:exon
so has part: feature:625408-625435:1:exon
so has part: feature:626189-627206:1:exon
so has part: feature:637304-637387:1:exon
so has part: feature:641606-641897:1:exon
so has part: feature:644142-644307:1:exon
so has part: feature:644438-647505:1:exon

position:623861:1
position: 623861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623861-623885:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:625408-625435:1:exon

position:625408:1
position: 625408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:625435:1
position: 625435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:626189-627206:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:637304-637387:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:641606-641897:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:644142-644307:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:644438-647505:1:exon

LOC125464850
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125464850
product: uncharacterized LOC125464850, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048557692.1
SIO_010081: LOC125464850
subclass of: SO_0000673
so part of: LOC125464850
location: join(624484..624835,626189..627206,637304..637387,641606..641897,644142..644307,644438..647505)
location: region:624484-647505:1
so has part: feature:624484-624835:1:exon
so has part: feature:626189-627206:1:exon
so has part: feature:637304-637387:1:exon
so has part: feature:641606-641897:1:exon
so has part: feature:644142-644307:1:exon
so has part: feature:644438-647505:1:exon

position:624484:1
position: 624484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:624484-624835:1:exon

position:624835:1
position: 624835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:626189-627206:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:637304-637387:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:641606-641897:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:644142-644307:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:644438-647505:1:exon

LOC125464850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125464850
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC125464850
translation: MESPGSFDQLTNCLKPVELLNGMCSNGETGIHSQAREHCSSKRQRRRAQNFTDNDLQTLLDEMQPRRDRLLGVHGRKPQKPISRAMWREVAMALNATSLTSRTADQCRKKFNDLTRAGKEKLMHNARERQECRGGIPNIKELTPYEEQAVELLGRQCGLAVVADGEIGVTVQTPEPSQQWGPEEEEDDDDDDEEEEEKLCYLINYEDEEDDDESKPDRESLKLDTAPFSTAPIPSISPPASLAFSVPRSSSDMVTRARLDSVNEEVALSDSQGIRESDEWGMGEDMPLPQRRPRRRMPLTPDPWGSDFMGTRSKRRMFNEHHTYVQALRSVFEDVQHLTAVTLESTALICNSIKEAFTSLQSSMEHVAASLESAAHPDFRNAQESVCAPTPTEVQNAALAVIGEKIDSTLRVGFQSLGAGIQAAVTHGFQDLIAAIKPPIPVVNGNANTGLSAMPMSDSNLPEAASSQDSHTWQTSNPPSHRIKPAEFKKRYQTVHTEAHKMQPVVAPCQEEAALGGGPPQSHEPFVAQELPMPSCDTQVAPRRNSRIGDRKTRLGTPGKPYIKRK
SIO_010081: LOC125464850
subclass of: SO_0000673
so part of: LOC125464850
location: join(637323..637387,641606..641897,644142..644307,644438..645615)
location: region:637323-645615:1
so has part: feature:637323-637387:1:exon
so has part: feature:641606-641897:1:exon
so has part: feature:644142-644307:1:exon
so has part: feature:644438-645615:1:exon

XP_048413646.1
type: Protein
SIO_000068: ncbiprotein

position:637323:1
position: 637323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:645615:1
position: 645615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:637323-637387:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:641606-641897:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:644142-644307:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:644438-645615:1:exon

LOC125464850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125464850
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC125464850
translation: MESPGSFDQLTNCLKPVELLNGMCSNGETGIHSQAREHCSSKRQRRRAQNFTDNDLQTLLDEMQPRRDRLLGVHGRKPQKPISRAMWREVAMALNATSLTSRTADQCRKKFNDLTRAGKEKLMHNARERQECRGGIPNIKELTPYEEQAVELLGRQCGLAVVADGEIGVTVQTPEPSQQWGPEEEEDDDDDDEEEEEKLCYLINYEDEEDDDESKPDRESLKLDTAPFSTAPIPSISPPASLAFSVPRSSSDMVTRARLDSVNEEVALSDSQGIRESDEWGMGEDMPLPQRRPRRRMPLTPDPWGSDFMGTRSKRRMFNEHHTYVQALRSVFEDVQHLTAVTLESTALICNSIKEAFTSLQSSMEHVAASLESAAHPDFRNAQESVCAPTPTEVQNAALAVIGEKIDSTLRVGFQSLGAGIQAAVTHGFQDLIAAIKPPIPVVNGNANTGLSAMPMSDSNLPEAASSQDSHTWQTSNPPSHRIKPAEFKKRYQTVHTEAHKMQPVVAPCQEEAALGGGPPQSHEPFVAQELPMPSCDTQVAPRRNSRIGDRKTRLGTPGKPYIKRK
SIO_010081: LOC125464850
subclass of: SO_0000673
so part of: LOC125464850
location: join(637323..637387,641606..641897,644142..644307,644438..645615)
location: region:637323-645615:1
so has part: feature:637323-637387:1:exon
so has part: feature:641606-641897:1:exon
so has part: feature:644142-644307:1:exon
so has part: feature:644438-645615:1:exon

XP_048413647.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:637323-637387:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:641606-641897:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:644142-644307:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:644438-645615:1:exon

LOC125464850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125464850
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC125464850
translation: MESPGSFDQLTNCLKPVELLNGMCSNGETGIHSQAREHCSSKRQRRRAQNFTDNDLQTLLDEMQPRRDRLLGVHGRKPQKPISRAMWREVAMALNATSLTSRTADQCRKKFNDLTRAGKEKLMHNARERQECRGGIPNIKELTPYEEQAVELLGRQCGLAVVADGEIGVTVQTPEPSQQWGPEEEEDDDDDDEEEEEKLCYLINYEDEEDDDESKPDRESLKLDTAPFSTAPIPSISPPASLAFSVPRSSSDMVTRARLDSVNEEVALSDSQGIRESDEWGMGEDMPLPQRRPRRRMPLTPDPWGSDFMGTRSKRRMFNEHHTYVQALRSVFEDVQHLTAVTLESTALICNSIKEAFTSLQSSMEHVAASLESAAHPDFRNAQESVCAPTPTEVQNAALAVIGEKIDSTLRVGFQSLGAGIQAAVTHGFQDLIAAIKPPIPVVNGNANTGLSAMPMSDSNLPEAASSQDSHTWQTSNPPSHRIKPAEFKKRYQTVHTEAHKMQPVVAPCQEEAALGGGPPQSHEPFVAQELPMPSCDTQVAPRRNSRIGDRKTRLGTPGKPYIKRK
SIO_010081: LOC125464850
subclass of: SO_0000673
so part of: LOC125464850
location: join(637323..637387,641606..641897,644142..644307,644438..645615)
location: region:637323-645615:1
so has part: feature:637323-637387:1:exon
so has part: feature:641606-641897:1:exon
so has part: feature:644142-644307:1:exon
so has part: feature:644438-645615:1:exon

XP_048413648.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:637323-637387:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:641606-641897:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:644142-644307:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:644438-645615:1:exon

LOC125464850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125464850
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC125464850
translation: MESPGSFDQLTNCLKPVELLNGMCSNGETGIHSQAREHCSSKRQRRRAQNFTDNDLQTLLDEMQPRRDRLLGVHGRKPQKPISRAMWREVAMALNATSLTSRTADQCRKKFNDLTRAGKEKLMHNARERQECRGGIPNIKELTPYEEQAVELLGRQCGLAVVADGEIGVTVQTPEPSQQWGPEEEEDDDDDDEEEEEKLCYLINYEDEEDDDESKPDRESLKLDTAPFSTAPIPSISPPASLAFSVPRSSSDMVTRARLDSVNEEVALSDSQGIRESDEWGMGEDMPLPQRRPRRRMPLTPDPWGSDFMGTRSKRRMFNEHHTYVQALRSVFEDVQHLTAVTLESTALICNSIKEAFTSLQSSMEHVAASLESAAHPDFRNAQESVCAPTPTEVQNAALAVIGEKIDSTLRVGFQSLGAGIQAAVTHGFQDLIAAIKPPIPVVNGNANTGLSAMPMSDSNLPEAASSQDSHTWQTSNPPSHRIKPAEFKKRYQTVHTEAHKMQPVVAPCQEEAALGGGPPQSHEPFVAQELPMPSCDTQVAPRRNSRIGDRKTRLGTPGKPYIKRK
SIO_010081: LOC125464850
subclass of: SO_0000673
so part of: LOC125464850
location: join(637323..637387,641606..641897,644142..644307,644438..645615)
location: region:637323-645615:1
so has part: feature:637323-637387:1:exon
so has part: feature:641606-641897:1:exon
so has part: feature:644142-644307:1:exon
so has part: feature:644438-645615:1:exon

XP_048413649.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:637323-637387:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:641606-641897:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:644142-644307:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:644438-645615:1:exon

LOC125464912
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125464912
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 740625..774105
location: region:740625-774105:1
so has part: feature:740625-774105:1:exon
subclass of: SO_0000010

125464912
type: Gene
SIO_000068: ncbigene

position:740625:1
position: 740625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:774105:1
position: 774105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:740625-774105:1:exon

LOC125464912
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 378071
gene: LOC125464912
product: KH domain-containing, RNA-binding, signal transduction-associated protein 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_007250126.1
SIO_010081: LOC125464912
so part of: LOC125464912
location: join(740625..740759,745676..745797,748252..748368,749014..749160,755614..755735,758502..758730,760310..760377,761105..761163,764389..764564,767712..767769,769200..769423,773979..774105)
location: region:740625-774105:1
so has part: feature:740625-740759:1:exon
so has part: feature:745676-745797:1:exon
so has part: feature:748252-748368:1:exon
so has part: feature:749014-749160:1:exon
so has part: feature:755614-755735:1:exon
so has part: feature:758502-758730:1:exon
so has part: feature:760310-760377:1:exon
so has part: feature:761105-761163:1:exon
so has part: feature:764389-764564:1:exon
so has part: feature:767712-767769:1:exon
so has part: feature:769200-769423:1:exon
so has part: feature:773979-774105:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:740625-740759:1:exon

position:740759:1
position: 740759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:745676-745797:1:exon

position:745676:1
position: 745676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:745797:1
position: 745797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:748252-748368:1:exon

position:748252:1
position: 748252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:748368:1
position: 748368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:749014-749160:1:exon

position:749014:1
position: 749014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:749160:1
position: 749160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:755614-755735:1:exon

position:755614:1
position: 755614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:755735:1
position: 755735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:758502-758730:1:exon

position:758502:1
position: 758502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:758730:1
position: 758730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:760310-760377:1:exon

position:760310:1
position: 760310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:760377:1
position: 760377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:761105-761163:1:exon

position:761105:1
position: 761105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:761163:1
position: 761163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:764389-764564:1:exon

position:764389:1
position: 764389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:764564:1
position: 764564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:767712-767769:1:exon

position:767712:1
position: 767712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:767769:1
position: 767769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:769200-769423:1:exon

position:769200:1
position: 769200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:769423:1
position: 769423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:773979-774105:1:exon

position:773979:1
position: 773979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125464912
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 378071
gene: LOC125464912
product: KH domain-containing, RNA-binding, signal transduction-associated protein 1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XR_007250127.1
SIO_010081: LOC125464912
so part of: LOC125464912
location: join(740625..740759,745676..745797,748252..748368,749014..749160,755614..755735,758502..758730,760310..760377,761105..761163,764389..764564,767712..767769,773979..774105)
location: region:740625-774105:1
so has part: feature:740625-740759:1:exon
so has part: feature:745676-745797:1:exon
so has part: feature:748252-748368:1:exon
so has part: feature:749014-749160:1:exon
so has part: feature:755614-755735:1:exon
so has part: feature:758502-758730:1:exon
so has part: feature:760310-760377:1:exon
so has part: feature:761105-761163:1:exon
so has part: feature:764389-764564:1:exon
so has part: feature:767712-767769:1:exon
so has part: feature:773979-774105:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:740625-740759:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:745676-745797:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:748252-748368:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:749014-749160:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:755614-755735:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:758502-758730:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:760310-760377:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:761105-761163:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:764389-764564:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:767712-767769:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:773979-774105:1:exon

LOC125464912
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125464912
product: KH domain-containing, RNA-binding, signal transduction-associated protein 1-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048557798.1
SIO_010081: LOC125464912
subclass of: SO_0000673
so part of: LOC125464912
location: join(740625..740759,745676..745797,748252..748368,749014..749160,755614..755735,758502..758730,760310..760377,761105..761163,764389..766436)
location: region:740625-766436:1
so has part: feature:740625-740759:1:exon
so has part: feature:745676-745797:1:exon
so has part: feature:748252-748368:1:exon
so has part: feature:749014-749160:1:exon
so has part: feature:755614-755735:1:exon
so has part: feature:758502-758730:1:exon
so has part: feature:760310-760377:1:exon
so has part: feature:761105-761163:1:exon
so has part: feature:764389-766436:1:exon

position:766436:1
position: 766436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:740625-740759:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:745676-745797:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:748252-748368:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:749014-749160:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:755614-755735:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:758502-758730:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:760310-760377:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:761105-761163:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:764389-766436:1:exon

LOC125464912
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125464912
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: KH domain-containing, RNA-binding, signal transduction-associated protein 1-like
translation: MANEKYLPELMAEKDSLDPSFVHASRLLAAEIEKVQKGEKKEEEKRFLDVLTQKNIKLSERCLIPVAQFPKFNFVGKLLGPRGNSLKRLQEDTGTKMSILGKGSMRDKSKEDELRKGGEAKYAHLNSDLHVLVEVFAPPTEAYSRMYHAMEELKKFLIPDYNDEIRQEQLTELAYLNGGQEASRGRGVRGRGAPPVPLARGRGAAPPLSASQYGPRSAITRGATVRGAPGGRREVASGRGATSVQRGAPAPRTRGAPSAYRPALHPPPAQESYDEYGYDDGYAEQSYDSYENYYDQSQGDAEYFDYGHGEVQETYEDYGQEDWNAGRASLKAPARSLKGMYRDHPYGRY
SIO_010081: LOC125464912
subclass of: SO_0000673
so part of: LOC125464912
location: join(740669..740759,745676..745797,748252..748368,749014..749160,755614..755735,758502..758730,760310..760377,761105..761163,764389..764483)
location: region:740669-764483:1
so has part: feature:740669-740759:1:exon
so has part: feature:745676-745797:1:exon
so has part: feature:748252-748368:1:exon
so has part: feature:749014-749160:1:exon
so has part: feature:755614-755735:1:exon
so has part: feature:758502-758730:1:exon
so has part: feature:760310-760377:1:exon
so has part: feature:761105-761163:1:exon
so has part: feature:764389-764483:1:exon

XP_048413755.1
type: Protein
SIO_000068: ncbiprotein

position:740669:1
position: 740669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:764483:1
position: 764483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:740669-740759:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:745676-745797:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:748252-748368:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:749014-749160:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:755614-755735:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:758502-758730:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:760310-760377:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:761105-761163:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:764389-764483:1:exon

LOC125465117
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125465117
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(817879..838077)
location: region:817879-838077:-1
so has part: feature:817879-838077:-1:exon
subclass of: SO_0000010

125465117
type: Gene
SIO_000068: ncbigene

position:817879:-1
position: 817879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:838077:-1
position: 838077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:817879-838077:-1:exon

LOC125465117
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465117
product: cornifelin homolog
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558266.1
SIO_010081: LOC125465117
subclass of: SO_0000673
so part of: LOC125465117
location: complement(join(817879..817995,820254..820351,825378..825514,827465..827625,837947..838077))
location: region:817879-838077:-1
so has part: feature:837947-838077:-1:exon
so has part: feature:827465-827625:-1:exon
so has part: feature:825378-825514:-1:exon
so has part: feature:820254-820351:-1:exon
so has part: feature:817879-817995:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:837947-838077:-1:exon

position:837947:-1
position: 837947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:827465-827625:-1:exon

position:827465:-1
position: 827465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:827625:-1
position: 827625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:825378-825514:-1:exon

position:825378:-1
position: 825378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:825514:-1
position: 825514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:820254-820351:-1:exon

position:820254:-1
position: 820254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:820351:-1
position: 820351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:817879-817995:-1:exon

position:817995:-1
position: 817995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125465117
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465117
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cornifelin homolog
translation: MSLPGVITQQPLTERRPLIGTGSWSSGICDLAGNIPVCILGALCPQILGCHLAHSYGENCCLPLVPGGLIALRTHMRLSYNIEGTICDDAIMLMCCGPCELCRMTRELRTRSG
SIO_010081: LOC125465117
subclass of: SO_0000673
so part of: LOC125465117
location: complement(join(820259..820351,825378..825514,827465..827576))
location: region:820259-827576:-1
so has part: feature:827465-827576:-1:exon
so has part: feature:825378-825514:-1:exon
so has part: feature:820259-820351:-1:exon

XP_048414223.1
type: Protein
SIO_000068: ncbiprotein

position:820259:-1
position: 820259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:827576:-1
position: 827576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:827465-827576:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:825378-825514:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:820259-820351:-1:exon

mrps15
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: mrps15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(859986..903287)
location: region:859986-903287:-1
so has part: feature:859986-903287:-1:exon
subclass of: SO_0000010

125465059
type: Gene
SIO_000068: ncbigene

position:859986:-1
position: 859986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:903287:-1
position: 903287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:859986-903287:-1:exon

mrps15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: mrps15
product: mitochondrial ribosomal protein S15, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558140.1
SIO_010081: mrps15
subclass of: SO_0000673
so part of: mrps15
location: complement(join(859986..860218,883926..883984,889283..889367,895467..895515,898423..898498,902134..902187,903160..903287))
location: region:859986-903287:-1
so has part: feature:903160-903287:-1:exon
so has part: feature:902134-902187:-1:exon
so has part: feature:898423-898498:-1:exon
so has part: feature:895467-895515:-1:exon
so has part: feature:889283-889367:-1:exon
so has part: feature:883926-883984:-1:exon
so has part: feature:859986-860218:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:903160-903287:-1:exon

position:903160:-1
position: 903160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:902134-902187:-1:exon

position:902134:-1
position: 902134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:902187:-1
position: 902187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:898423-898498:-1:exon

position:898423:-1
position: 898423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:898498:-1
position: 898498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:895467-895515:-1:exon

position:895467:-1
position: 895467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:895515:-1
position: 895515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:889283-889367:-1:exon

position:889283:-1
position: 889283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:889367:-1
position: 889367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:883926-883984:-1:exon

position:883926:-1
position: 883926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:883984:-1
position: 883984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:859986-860218:-1:exon

position:860218:-1
position: 860218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

mrps15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: mrps15
product: mitochondrial ribosomal protein S15, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558139.1
SIO_010081: mrps15
subclass of: SO_0000673
so part of: mrps15
location: complement(join(859986..860218,875227..875418,883926..883984,889283..889367,895467..895515,898423..898498,902134..902187,903160..903287))
location: region:859986-903287:-1
so has part: feature:903160-903287:-1:exon
so has part: feature:902134-902187:-1:exon
so has part: feature:898423-898498:-1:exon
so has part: feature:895467-895515:-1:exon
so has part: feature:889283-889367:-1:exon
so has part: feature:883926-883984:-1:exon
so has part: feature:875227-875418:-1:exon
so has part: feature:859986-860218:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:903160-903287:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:902134-902187:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:898423-898498:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:895467-895515:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:889283-889367:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:883926-883984:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:875227-875418:-1:exon

position:875227:-1
position: 875227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:875418:-1
position: 875418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:859986-860218:-1:exon

mrps15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: mrps15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 28S ribosomal protein S15, mitochondrial isoform X2
translation: MTVTMLRRAVSRFLRPGGWALFTWEGPGAVVSGQWGGASLVVANNYASVSKKTREFPSQLDDLSPTMLKKDYKDLEIMNMTNDVVRKLLSLEMATHKEKLKLKTSQLVEKVQRSPSDVGSTEVQIAILTAKIRNYQEHLQVHRKVFQELQKLRAAKQLKQKAAIAEKAQSVNKEVNEGAPV
SIO_010081: mrps15
subclass of: SO_0000673
so part of: mrps15
location: complement(join(860105..860218,883926..883984,889283..889367,895467..895515,898423..898498,902134..902187,903160..903268))
location: region:860105-903268:-1
so has part: feature:903160-903268:-1:exon
so has part: feature:902134-902187:-1:exon
so has part: feature:898423-898498:-1:exon
so has part: feature:895467-895515:-1:exon
so has part: feature:889283-889367:-1:exon
so has part: feature:883926-883984:-1:exon
so has part: feature:860105-860218:-1:exon

XP_048414097.1
type: Protein
SIO_000068: ncbiprotein

position:860105:-1
position: 860105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:903268:-1
position: 903268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:903160-903268:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:902134-902187:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:898423-898498:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:895467-895515:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:889283-889367:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:883926-883984:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:860105-860218:-1:exon

mrps15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: mrps15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 28S ribosomal protein S15, mitochondrial isoform X1
translation: MTVTMLRRAVSRFLRPGGWALFTWEGPGAVVSGQWGGASLVVANNYASVSKKTREFPSQLDDLSPTMLKKDYKDLEIMNMTNDVVRKLLSLEMATHKEKLKLKTSQLVEKVQRSPSDVGSTEVQIAILTAKIRNYQEHLQVHRKDKTNKRHMLMAIDRRKKLLKYLRRTRYEVFENVCTQLGIQYTFPPDYYRKVTQRWAAKKALCIRVFQELQKLRAAKQLKQKAAIAEKAQSVNKEVNEGAPV
SIO_010081: mrps15
subclass of: SO_0000673
so part of: mrps15
location: complement(join(860105..860218,875227..875418,883926..883984,889283..889367,895467..895515,898423..898498,902134..902187,903160..903268))
location: region:860105-903268:-1
so has part: feature:903160-903268:-1:exon
so has part: feature:902134-902187:-1:exon
so has part: feature:898423-898498:-1:exon
so has part: feature:895467-895515:-1:exon
so has part: feature:889283-889367:-1:exon
so has part: feature:883926-883984:-1:exon
so has part: feature:875227-875418:-1:exon
so has part: feature:860105-860218:-1:exon

XP_048414096.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:903160-903268:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:902134-902187:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:898423-898498:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:895467-895515:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:889283-889367:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:883926-883984:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:875227-875418:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:860105-860218:-1:exon

tinagl1
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: tinagl1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(980999..1070813)
location: region:980999-1070813:-1
so has part: feature:980999-1070813:-1:exon
subclass of: SO_0000010

125464992
type: Gene
SIO_000068: ncbigene

position:980999:-1
position: 980999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1070813:-1
position: 1070813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:980999-1070813:-1:exon

tinagl1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: tinagl1
product: tubulointerstitial nephritis antigen-like 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558007.1
SIO_010081: tinagl1
subclass of: SO_0000673
so part of: tinagl1
location: complement(join(980999..982928,988278..988323,1000810..1000933,1002541..1002586,1003086..1003269,1012397..1012547,1014459..1014582,1019463..1019577,1057493..1057533,1065836..1065864,1069859..1070198,1070634..1070813))
location: region:980999-1070813:-1
so has part: feature:1070634-1070813:-1:exon
so has part: feature:1069859-1070198:-1:exon
so has part: feature:1065836-1065864:-1:exon
so has part: feature:1057493-1057533:-1:exon
so has part: feature:1019463-1019577:-1:exon
so has part: feature:1014459-1014582:-1:exon
so has part: feature:1012397-1012547:-1:exon
so has part: feature:1003086-1003269:-1:exon
so has part: feature:1002541-1002586:-1:exon
so has part: feature:1000810-1000933:-1:exon
so has part: feature:988278-988323:-1:exon
so has part: feature:980999-982928:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1070634-1070813:-1:exon

position:1070634:-1
position: 1070634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1069859-1070198:-1:exon

position:1069859:-1
position: 1069859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1070198:-1
position: 1070198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1065836-1065864:-1:exon

position:1065836:-1
position: 1065836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1065864:-1
position: 1065864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1057493-1057533:-1:exon

position:1057493:-1
position: 1057493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1057533:-1
position: 1057533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1019463-1019577:-1:exon

position:1019463:-1
position: 1019463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1019577:-1
position: 1019577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1014459-1014582:-1:exon

position:1014459:-1
position: 1014459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1014582:-1
position: 1014582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1012397-1012547:-1:exon

position:1012397:-1
position: 1012397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1012547:-1
position: 1012547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1003086-1003269:-1:exon

position:1003086:-1
position: 1003086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1003269:-1
position: 1003269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1002541-1002586:-1:exon

position:1002541:-1
position: 1002541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1002586:-1
position: 1002586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1000810-1000933:-1:exon

position:1000810:-1
position: 1000810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1000933:-1
position: 1000933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:988278-988323:-1:exon

position:988278:-1
position: 988278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:988323:-1
position: 988323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:980999-982928:-1:exon

position:982928:-1
position: 982928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

tinagl1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: tinagl1
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(1065842..1065844),aa:OTHER)
transl except: (pos:complement(join(1019577, 1057493..1057494)),aa:OTHER)
product: LOW QUALITY PROTEIN: tubulointerstitial nephritis antigen-like
translation: MDRAGPLQLLLLLWTLCPGLHAALNRGRRELNVGLHRSGIRDPQGSYCRRLGSCCPGRDDVCTVPYIDTVCYCDLFCNRTVSDCCPDFWTFCLGTQPPEQPVEGCLYDXRAYPSGATYRENCNLXWRASNYSQFWGLTLDEGIRYRLGTRRPSNTVMNMNELNMKMDSNDLLPRYFNAANKWPGMIHEPMDQGNCAASWAFSTAAVASDRISIQSMGHMTAALSPQNLISCNTRNQQGCHGGRVDGAWWYLRRRGVVSDACYPFSNSEKQQLSSQCMMSTRSAGRGKRQATMPCPNPYSHTNQIYQTTPPYRLSNNDKEIMKEIMENGPVQALMEVHEDFFVYRSGVYRHTPVMAEKPETFRRHGTHSVKITGWGEDQGHDGQIRQYWIAANSWGRDWGENGYFRIARGENECDIETFILGSWGRVTMEDMLHK
SIO_010081: tinagl1
subclass of: SO_0000673
so part of: tinagl1
location: complement(join(982788..982928,988278..988323,1000810..1000933,1002541..1002586,1003086..1003269,1012397..1012547,1014459..1014582,1019463..1019577,1057493..1057533,1065836..1065864,1069859..1070162))
location: region:982788-1070162:-1
so has part: feature:1069859-1070162:-1:exon
so has part: feature:1065836-1065864:-1:exon
so has part: feature:1057493-1057533:-1:exon
so has part: feature:1019463-1019577:-1:exon
so has part: feature:1014459-1014582:-1:exon
so has part: feature:1012397-1012547:-1:exon
so has part: feature:1003086-1003269:-1:exon
so has part: feature:1002541-1002586:-1:exon
so has part: feature:1000810-1000933:-1:exon
so has part: feature:988278-988323:-1:exon
so has part: feature:982788-982928:-1:exon

XP_048413964.1
type: Protein
SIO_000068: ncbiprotein

position:982788:-1
position: 982788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1070162:-1
position: 1070162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1069859-1070162:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1065836-1065864:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1057493-1057533:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1019463-1019577:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1014459-1014582:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1012397-1012547:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1003086-1003269:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1002541-1002586:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1000810-1000933:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:988278-988323:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:982788-982928:-1:exon

LOC125464871
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125464871
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1153596..1680098)
location: region:1153596-1680098:-1
so has part: feature:1153596-1680098:-1:exon
subclass of: SO_0000010

125464871
type: Gene
SIO_000068: ncbigene

position:1153596:-1
position: 1153596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1680098:-1
position: 1680098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1153596-1680098:-1:exon

LOC125464871
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125464871
product: potassium voltage-gated channel subfamily KQT member 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048557735.1
SIO_010081: LOC125464871
subclass of: SO_0000673
so part of: LOC125464871
location: complement(join(1153596..1154103,1166976..1167111,1168456..1168587,1216970..1217072,1222356..1222573,1271999..1272151,1290700..1290788,1312919..1313029,1322223..1322348,1326007..1326182,1345015..1345141,1373893..1373983,1679474..1680098))
location: region:1153596-1680098:-1
so has part: feature:1679474-1680098:-1:exon
so has part: feature:1373893-1373983:-1:exon
so has part: feature:1345015-1345141:-1:exon
so has part: feature:1326007-1326182:-1:exon
so has part: feature:1322223-1322348:-1:exon
so has part: feature:1312919-1313029:-1:exon
so has part: feature:1290700-1290788:-1:exon
so has part: feature:1271999-1272151:-1:exon
so has part: feature:1222356-1222573:-1:exon
so has part: feature:1216970-1217072:-1:exon
so has part: feature:1168456-1168587:-1:exon
so has part: feature:1166976-1167111:-1:exon
so has part: feature:1153596-1154103:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1679474-1680098:-1:exon

position:1679474:-1
position: 1679474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1373893-1373983:-1:exon

position:1373893:-1
position: 1373893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1373983:-1
position: 1373983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1345015-1345141:-1:exon

position:1345015:-1
position: 1345015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1345141:-1
position: 1345141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1326007-1326182:-1:exon

position:1326007:-1
position: 1326007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1326182:-1
position: 1326182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1322223-1322348:-1:exon

position:1322223:-1
position: 1322223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1322348:-1
position: 1322348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1312919-1313029:-1:exon

position:1312919:-1
position: 1312919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1313029:-1
position: 1313029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1290700-1290788:-1:exon

position:1290700:-1
position: 1290700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1290788:-1
position: 1290788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1271999-1272151:-1:exon

position:1271999:-1
position: 1271999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1272151:-1
position: 1272151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1222356-1222573:-1:exon

position:1222356:-1
position: 1222356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1222573:-1
position: 1222573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1216970-1217072:-1:exon

position:1216970:-1
position: 1216970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1217072:-1
position: 1217072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1168456-1168587:-1:exon

position:1168456:-1
position: 1168456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1168587:-1
position: 1168587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1166976-1167111:-1:exon

position:1166976:-1
position: 1166976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1167111:-1
position: 1167111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1153596-1154103:-1:exon

position:1154103:-1
position: 1154103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125464871
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125464871
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium voltage-gated channel subfamily KQT member 4-like
translation: MPRNHADAGGMADEKRVEFVGLTAVESGTSGRDGVAASPGERHQGSRLRLAPQPGDGERLVLAGLPGDSVQSARVGLLGRPLPLKHGNKRNARYRKLQNCLYNVLERPRGWAFIYHAFIFLLVFSCLVLSVFSTIPAHQDVANSGLFILEFLMIIVFGMEYVVRIWAAGCCCRYRGLQGRLRFARKPFCVIDFIVFVASVAVIAAGTKGNIFATSALRSMRFLQILRMVRMDRRGGTWKLLGSVVYAHSKELITAWYIGFLILIFSSFLVYLAEKEANSQFLTYADSLWWGTVTLTTIGYGDKTPQTWLGRMLAAGFALLGVSFFALPAAAWRLYSTDVSRPYLTATWYYYDSVLPSFRELAVMLESLSRWRNGGLRNSDCKKLQEESPRIHAFHSSQRLIVPPCNLGESNQKLGFRDRMKMNSPRIQSIRSKQASAPSIQRSPSTENATQVSPTKVQKSWSFNDRTRFRASLRLKPRTTVETENMGDDNYDEKTFHCDISMEDVKPVVKTLIRALRILKFLVAKRKFKETLRPYDVKDVIEQYSAGHLDMLGRIKSLQSRVDQIIGKGQMPTDKKLREKGEKIAPELEPFDELSMMGRVIKVEKQVQSIEQKLDMLLMIYSQSLSKGSVTALTLAAMNIPLIDQDLTSDYHSPVDTTDISMSTQTLNISASTNLE
SIO_010081: LOC125464871
subclass of: SO_0000673
so part of: LOC125464871
location: complement(join(1153891..1154103,1166976..1167111,1168456..1168587,1216970..1217072,1222356..1222573,1271999..1272151,1290700..1290788,1312919..1313029,1322223..1322348,1326007..1326182,1345015..1345141,1373893..1373983,1679474..1679829))
location: region:1153891-1679829:-1
so has part: feature:1679474-1679829:-1:exon
so has part: feature:1373893-1373983:-1:exon
so has part: feature:1345015-1345141:-1:exon
so has part: feature:1326007-1326182:-1:exon
so has part: feature:1322223-1322348:-1:exon
so has part: feature:1312919-1313029:-1:exon
so has part: feature:1290700-1290788:-1:exon
so has part: feature:1271999-1272151:-1:exon
so has part: feature:1222356-1222573:-1:exon
so has part: feature:1216970-1217072:-1:exon
so has part: feature:1168456-1168587:-1:exon
so has part: feature:1166976-1167111:-1:exon
so has part: feature:1153891-1154103:-1:exon

XP_048413692.1
type: Protein
SIO_000068: ncbiprotein

position:1153891:-1
position: 1153891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1679829:-1
position: 1679829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1679474-1679829:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1373893-1373983:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1345015-1345141:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1326007-1326182:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1322223-1322348:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1312919-1313029:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1290700-1290788:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1271999-1272151:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1222356-1222573:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1216970-1217072:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1168456-1168587:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1166976-1167111:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1153891-1154103:-1:exon

LOC125465120
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125465120
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1723529..1728316
location: region:1723529-1728316:1
so has part: feature:1723529-1728316:1:exon
subclass of: SO_0000011

125465120
type: Gene
SIO_000068: ncbigene

position:1723529:1
position: 1723529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1728316:1
position: 1728316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1723529-1728316:1:exon

LOC125465120
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 378071
nc RNA class: lncRNA
gene: LOC125465120
product: uncharacterized LOC125465120, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_007250170.1
SIO_010081: LOC125465120
subclass of: SO_0000673
so part of: LOC125465120
location: join(1723529..1724200,1726870..1726947,1727885..1728316)
location: region:1723529-1728316:1
so has part: feature:1723529-1724200:1:exon
so has part: feature:1726870-1726947:1:exon
so has part: feature:1727885-1728316:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1723529-1724200:1:exon

position:1724200:1
position: 1724200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1726870-1726947:1:exon

position:1726870:1
position: 1726870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1726947:1
position: 1726947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1727885-1728316:1:exon

position:1727885:1
position: 1727885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125465120
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 378071
nc RNA class: lncRNA
gene: LOC125465120
product: uncharacterized LOC125465120, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_007250171.1
SIO_010081: LOC125465120
subclass of: SO_0000673
so part of: LOC125465120
location: join(1724696..1724842,1726126..1726247,1726870..1726947,1727885..1728316)
location: region:1724696-1728316:1
so has part: feature:1724696-1724842:1:exon
so has part: feature:1726126-1726247:1:exon
so has part: feature:1726870-1726947:1:exon
so has part: feature:1727885-1728316:1:exon

position:1724696:1
position: 1724696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1724696-1724842:1:exon

position:1724842:1
position: 1724842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1726126-1726247:1:exon

position:1726126:1
position: 1726126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1726247:1
position: 1726247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1726870-1726947:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1727885-1728316:1:exon

LOC125465120
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 378071
nc RNA class: lncRNA
gene: LOC125465120
product: uncharacterized LOC125465120, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_007250172.1
SIO_010081: LOC125465120
subclass of: SO_0000673
so part of: LOC125465120
location: join(1724899..1724997,1726126..1726247,1726870..1726947,1727885..1728316)
location: region:1724899-1728316:1
so has part: feature:1724899-1724997:1:exon
so has part: feature:1726126-1726247:1:exon
so has part: feature:1726870-1726947:1:exon
so has part: feature:1727885-1728316:1:exon

position:1724899:1
position: 1724899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1724899-1724997:1:exon

position:1724997:1
position: 1724997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1726126-1726247:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1726870-1726947:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1727885-1728316:1:exon

nfyc
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: nfyc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1731338..1830433)
location: region:1731338-1830433:-1
so has part: feature:1731338-1830433:-1:exon
subclass of: SO_0000010

125465129
type: Gene
SIO_000068: ncbigene

position:1731338:-1
position: 1731338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1830433:-1
position: 1830433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1731338-1830433:-1:exon

nfyc
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: nfyc
product: nuclear transcription factor Y, gamma, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558288.1
SIO_010081: nfyc
subclass of: SO_0000673
so part of: nfyc
location: complement(join(1731338..1737033,1747405..1747476,1749667..1749777,1750905..1751057,1760281..1760358,1762281..1762451,1786451..1786546,1789693..1789806,1792661..1792732,1796110..1796240,1830317..1830433))
location: region:1731338-1830433:-1
so has part: feature:1830317-1830433:-1:exon
so has part: feature:1796110-1796240:-1:exon
so has part: feature:1792661-1792732:-1:exon
so has part: feature:1789693-1789806:-1:exon
so has part: feature:1786451-1786546:-1:exon
so has part: feature:1762281-1762451:-1:exon
so has part: feature:1760281-1760358:-1:exon
so has part: feature:1750905-1751057:-1:exon
so has part: feature:1749667-1749777:-1:exon
so has part: feature:1747405-1747476:-1:exon
so has part: feature:1731338-1737033:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1830317-1830433:-1:exon

position:1830317:-1
position: 1830317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1796110-1796240:-1:exon

position:1796110:-1
position: 1796110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1796240:-1
position: 1796240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1792661-1792732:-1:exon

position:1792661:-1
position: 1792661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1792732:-1
position: 1792732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1789693-1789806:-1:exon

position:1789693:-1
position: 1789693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1789806:-1
position: 1789806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1786451-1786546:-1:exon

position:1786451:-1
position: 1786451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1786546:-1
position: 1786546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1762281-1762451:-1:exon

position:1762281:-1
position: 1762281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1762451:-1
position: 1762451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1760281-1760358:-1:exon

position:1760281:-1
position: 1760281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1760358:-1
position: 1760358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1750905-1751057:-1:exon

position:1750905:-1
position: 1750905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1751057:-1
position: 1751057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1749667-1749777:-1:exon

position:1749667:-1
position: 1749667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1749777:-1
position: 1749777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1747405-1747476:-1:exon

position:1747405:-1
position: 1747405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1747476:-1
position: 1747476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1731338-1737033:-1:exon

position:1737033:-1
position: 1737033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

nfyc
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: nfyc
product: nuclear transcription factor Y, gamma, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558284.1
SIO_010081: nfyc
subclass of: SO_0000673
so part of: nfyc
location: complement(join(1731338..1737033,1747405..1747476,1749667..1749777,1750905..1751057,1760281..1760358,1762281..1762451,1786451..1786546,1789693..1789806,1792661..1792732,1796110..1796240,1808782..1808867,1817627..1817692,1830317..1830422))
location: region:1731338-1830422:-1
so has part: feature:1830317-1830422:-1:exon
so has part: feature:1817627-1817692:-1:exon
so has part: feature:1808782-1808867:-1:exon
so has part: feature:1796110-1796240:-1:exon
so has part: feature:1792661-1792732:-1:exon
so has part: feature:1789693-1789806:-1:exon
so has part: feature:1786451-1786546:-1:exon
so has part: feature:1762281-1762451:-1:exon
so has part: feature:1760281-1760358:-1:exon
so has part: feature:1750905-1751057:-1:exon
so has part: feature:1749667-1749777:-1:exon
so has part: feature:1747405-1747476:-1:exon
so has part: feature:1731338-1737033:-1:exon

position:1830422:-1
position: 1830422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1830317-1830422:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1817627-1817692:-1:exon

position:1817627:-1
position: 1817627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1817692:-1
position: 1817692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1808782-1808867:-1:exon

position:1808782:-1
position: 1808782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1808867:-1
position: 1808867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1796110-1796240:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1792661-1792732:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1789693-1789806:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1786451-1786546:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1762281-1762451:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1760281-1760358:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1750905-1751057:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1749667-1749777:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1747405-1747476:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1731338-1737033:-1:exon

nfyc
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: nfyc
product: nuclear transcription factor Y, gamma, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558287.1
SIO_010081: nfyc
subclass of: SO_0000673
so part of: nfyc
location: complement(join(1731338..1737033,1747405..1747476,1749667..1749777,1750905..1751057,1760281..1760358,1762281..1762451,1786451..1786546,1789693..1789806,1792661..1792732,1796110..1796240,1817627..1817692,1830317..1830421))
location: region:1731338-1830421:-1
so has part: feature:1830317-1830421:-1:exon
so has part: feature:1817627-1817692:-1:exon
so has part: feature:1796110-1796240:-1:exon
so has part: feature:1792661-1792732:-1:exon
so has part: feature:1789693-1789806:-1:exon
so has part: feature:1786451-1786546:-1:exon
so has part: feature:1762281-1762451:-1:exon
so has part: feature:1760281-1760358:-1:exon
so has part: feature:1750905-1751057:-1:exon
so has part: feature:1749667-1749777:-1:exon
so has part: feature:1747405-1747476:-1:exon
so has part: feature:1731338-1737033:-1:exon

position:1830421:-1
position: 1830421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1830317-1830421:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1817627-1817692:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1796110-1796240:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1792661-1792732:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1789693-1789806:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1786451-1786546:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1762281-1762451:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1760281-1760358:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1750905-1751057:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1749667-1749777:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1747405-1747476:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1731338-1737033:-1:exon

nfyc
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: nfyc
product: nuclear transcription factor Y, gamma, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558283.1
SIO_010081: nfyc
subclass of: SO_0000673
so part of: nfyc
location: complement(join(1731338..1737033,1747405..1747476,1749667..1749777,1750905..1751057,1760281..1760358,1762281..1762451,1786451..1786546,1789693..1789806,1792661..1792732,1796110..1796240,1808782..1808867,1817627..1817692,1822871..1822953,1830317..1830418))
location: region:1731338-1830418:-1
so has part: feature:1830317-1830418:-1:exon
so has part: feature:1822871-1822953:-1:exon
so has part: feature:1817627-1817692:-1:exon
so has part: feature:1808782-1808867:-1:exon
so has part: feature:1796110-1796240:-1:exon
so has part: feature:1792661-1792732:-1:exon
so has part: feature:1789693-1789806:-1:exon
so has part: feature:1786451-1786546:-1:exon
so has part: feature:1762281-1762451:-1:exon
so has part: feature:1760281-1760358:-1:exon
so has part: feature:1750905-1751057:-1:exon
so has part: feature:1749667-1749777:-1:exon
so has part: feature:1747405-1747476:-1:exon
so has part: feature:1731338-1737033:-1:exon

position:1830418:-1
position: 1830418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1830317-1830418:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1822871-1822953:-1:exon

position:1822871:-1
position: 1822871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1822953:-1
position: 1822953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1817627-1817692:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1808782-1808867:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1796110-1796240:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1792661-1792732:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1789693-1789806:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1786451-1786546:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1762281-1762451:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1760281-1760358:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1750905-1751057:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1749667-1749777:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1747405-1747476:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1731338-1737033:-1:exon

nfyc
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: nfyc
product: nuclear transcription factor Y, gamma, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558286.1
SIO_010081: nfyc
subclass of: SO_0000673
so part of: nfyc
location: complement(join(1731338..1737033,1747405..1747476,1749667..1749777,1750905..1751057,1760281..1760358,1762281..1762451,1786451..1786546,1789693..1789806,1792661..1792732,1796110..1796240,1822871..1822953,1830317..1830416))
location: region:1731338-1830416:-1
so has part: feature:1830317-1830416:-1:exon
so has part: feature:1822871-1822953:-1:exon
so has part: feature:1796110-1796240:-1:exon
so has part: feature:1792661-1792732:-1:exon
so has part: feature:1789693-1789806:-1:exon
so has part: feature:1786451-1786546:-1:exon
so has part: feature:1762281-1762451:-1:exon
so has part: feature:1760281-1760358:-1:exon
so has part: feature:1750905-1751057:-1:exon
so has part: feature:1749667-1749777:-1:exon
so has part: feature:1747405-1747476:-1:exon
so has part: feature:1731338-1737033:-1:exon

position:1830416:-1
position: 1830416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1830317-1830416:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1822871-1822953:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1796110-1796240:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1792661-1792732:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1789693-1789806:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1786451-1786546:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1762281-1762451:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1760281-1760358:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1750905-1751057:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1749667-1749777:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1747405-1747476:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1731338-1737033:-1:exon

nfyc
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: nfyc
product: nuclear transcription factor Y, gamma, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558285.1
SIO_010081: nfyc
subclass of: SO_0000673
so part of: nfyc
location: complement(join(1731338..1737033,1747405..1747476,1749667..1749777,1750905..1751057,1760281..1760358,1762281..1762451,1786451..1786546,1789693..1789806,1792661..1792732,1796110..1796240,1817627..1817692,1822871..1823194))
location: region:1731338-1823194:-1
so has part: feature:1822871-1823194:-1:exon
so has part: feature:1817627-1817692:-1:exon
so has part: feature:1796110-1796240:-1:exon
so has part: feature:1792661-1792732:-1:exon
so has part: feature:1789693-1789806:-1:exon
so has part: feature:1786451-1786546:-1:exon
so has part: feature:1762281-1762451:-1:exon
so has part: feature:1760281-1760358:-1:exon
so has part: feature:1750905-1751057:-1:exon
so has part: feature:1749667-1749777:-1:exon
so has part: feature:1747405-1747476:-1:exon
so has part: feature:1731338-1737033:-1:exon

position:1823194:-1
position: 1823194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1822871-1823194:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1817627-1817692:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1796110-1796240:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1792661-1792732:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1789693-1789806:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1786451-1786546:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1762281-1762451:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1760281-1760358:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1750905-1751057:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1749667-1749777:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1747405-1747476:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1731338-1737033:-1:exon

nfyc
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: nfyc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear transcription factor Y subunit gamma isoform X1
translation: MFPNVFGMFFVSSFVATDSSLGMSNTADGSFSTASQGGGSTEAQHLLQTFWPRAMEEIRNLTPNDFKVQDLPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELSLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELKPPKRQEEVRQTVPSSEQVQYYFTLAQQPTTVQVQGQQQGQQGSGSTTIQPSQIIIGQPQQGQVVQGATVQQLQQVQVAQSQTTASSITTAPVTMQVGDGQQVQIVPAQNQTQQTQSNSGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLASGTTQQVGQTEVQQGQQQQQQQYSQFTDGQQLYQIQQVTMPAGQDITQPMFIQSTNQTTDGQPTQVTGE
SIO_010081: nfyc
subclass of: SO_0000673
so part of: nfyc
location: complement(join(1736914..1737033,1747405..1747476,1749667..1749777,1750905..1751057,1760281..1760358,1762281..1762451,1786451..1786546,1789693..1789806,1792661..1792732,1796110..1796240,1808782..1808839))
location: region:1736914-1808839:-1
so has part: feature:1808782-1808839:-1:exon
so has part: feature:1796110-1796240:-1:exon
so has part: feature:1792661-1792732:-1:exon
so has part: feature:1789693-1789806:-1:exon
so has part: feature:1786451-1786546:-1:exon
so has part: feature:1762281-1762451:-1:exon
so has part: feature:1760281-1760358:-1:exon
so has part: feature:1750905-1751057:-1:exon
so has part: feature:1749667-1749777:-1:exon
so has part: feature:1747405-1747476:-1:exon
so has part: feature:1736914-1737033:-1:exon

XP_048414240.1
type: Protein
SIO_000068: ncbiprotein

position:1736914:-1
position: 1736914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1808839:-1
position: 1808839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1808782-1808839:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1796110-1796240:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1792661-1792732:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1789693-1789806:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1786451-1786546:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1762281-1762451:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1760281-1760358:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1750905-1751057:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1749667-1749777:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1747405-1747476:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1736914-1737033:-1:exon

nfyc
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: nfyc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear transcription factor Y subunit gamma isoform X1
translation: MFPNVFGMFFVSSFVATDSSLGMSNTADGSFSTASQGGGSTEAQHLLQTFWPRAMEEIRNLTPNDFKVQDLPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELSLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELKPPKRQEEVRQTVPSSEQVQYYFTLAQQPTTVQVQGQQQGQQGSGSTTIQPSQIIIGQPQQGQVVQGATVQQLQQVQVAQSQTTASSITTAPVTMQVGDGQQVQIVPAQNQTQQTQSNSGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLASGTTQQVGQTEVQQGQQQQQQQYSQFTDGQQLYQIQQVTMPAGQDITQPMFIQSTNQTTDGQPTQVTGE
SIO_010081: nfyc
subclass of: SO_0000673
so part of: nfyc
location: complement(join(1736914..1737033,1747405..1747476,1749667..1749777,1750905..1751057,1760281..1760358,1762281..1762451,1786451..1786546,1789693..1789806,1792661..1792732,1796110..1796240,1808782..1808839))
location: region:1736914-1808839:-1
so has part: feature:1808782-1808839:-1:exon
so has part: feature:1796110-1796240:-1:exon
so has part: feature:1792661-1792732:-1:exon
so has part: feature:1789693-1789806:-1:exon
so has part: feature:1786451-1786546:-1:exon
so has part: feature:1762281-1762451:-1:exon
so has part: feature:1760281-1760358:-1:exon
so has part: feature:1750905-1751057:-1:exon
so has part: feature:1749667-1749777:-1:exon
so has part: feature:1747405-1747476:-1:exon
so has part: feature:1736914-1737033:-1:exon

XP_048414241.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1808782-1808839:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1796110-1796240:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1792661-1792732:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1789693-1789806:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1786451-1786546:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1762281-1762451:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1760281-1760358:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1750905-1751057:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1749667-1749777:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1747405-1747476:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1736914-1737033:-1:exon

nfyc
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: nfyc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear transcription factor Y subunit gamma isoform X2
translation: MSNTADGSFSTASQGGGSTEAQHLLQTFWPRAMEEIRNLTPNDFKVQDLPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELSLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELKPPKRQEEVRQTVPSSEQVQYYFTLAQQPTTVQVQGQQQGQQGSGSTTIQPSQIIIGQPQQGQVVQGATVQQLQQVQVAQSQTTASSITTAPVTMQVGDGQQVQIVPAQNQTQQTQSNSGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLASGTTQQVGQTEVQQGQQQQQQQYSQFTDGQQLYQIQQVTMPAGQDITQPMFIQSTNQTTDGQPTQVTGE
SIO_010081: nfyc
subclass of: SO_0000673
so part of: nfyc
location: complement(join(1736914..1737033,1747405..1747476,1749667..1749777,1750905..1751057,1760281..1760358,1762281..1762451,1786451..1786546,1789693..1789806,1792661..1792732,1796110..1796232))
location: region:1736914-1796232:-1
so has part: feature:1796110-1796232:-1:exon
so has part: feature:1792661-1792732:-1:exon
so has part: feature:1789693-1789806:-1:exon
so has part: feature:1786451-1786546:-1:exon
so has part: feature:1762281-1762451:-1:exon
so has part: feature:1760281-1760358:-1:exon
so has part: feature:1750905-1751057:-1:exon
so has part: feature:1749667-1749777:-1:exon
so has part: feature:1747405-1747476:-1:exon
so has part: feature:1736914-1737033:-1:exon

XP_048414242.1
type: Protein
SIO_000068: ncbiprotein

position:1796232:-1
position: 1796232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1796110-1796232:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1792661-1792732:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1789693-1789806:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1786451-1786546:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1762281-1762451:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1760281-1760358:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1750905-1751057:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1749667-1749777:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1747405-1747476:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1736914-1737033:-1:exon

nfyc
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: nfyc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear transcription factor Y subunit gamma isoform X2
translation: MSNTADGSFSTASQGGGSTEAQHLLQTFWPRAMEEIRNLTPNDFKVQDLPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELSLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELKPPKRQEEVRQTVPSSEQVQYYFTLAQQPTTVQVQGQQQGQQGSGSTTIQPSQIIIGQPQQGQVVQGATVQQLQQVQVAQSQTTASSITTAPVTMQVGDGQQVQIVPAQNQTQQTQSNSGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLASGTTQQVGQTEVQQGQQQQQQQYSQFTDGQQLYQIQQVTMPAGQDITQPMFIQSTNQTTDGQPTQVTGE
SIO_010081: nfyc
subclass of: SO_0000673
so part of: nfyc
location: complement(join(1736914..1737033,1747405..1747476,1749667..1749777,1750905..1751057,1760281..1760358,1762281..1762451,1786451..1786546,1789693..1789806,1792661..1792732,1796110..1796232))
location: region:1736914-1796232:-1
so has part: feature:1796110-1796232:-1:exon
so has part: feature:1792661-1792732:-1:exon
so has part: feature:1789693-1789806:-1:exon
so has part: feature:1786451-1786546:-1:exon
so has part: feature:1762281-1762451:-1:exon
so has part: feature:1760281-1760358:-1:exon
so has part: feature:1750905-1751057:-1:exon
so has part: feature:1749667-1749777:-1:exon
so has part: feature:1747405-1747476:-1:exon
so has part: feature:1736914-1737033:-1:exon

XP_048414243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1796110-1796232:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1792661-1792732:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1789693-1789806:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1786451-1786546:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1762281-1762451:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1760281-1760358:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1750905-1751057:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1749667-1749777:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1747405-1747476:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1736914-1737033:-1:exon

nfyc
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: nfyc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear transcription factor Y subunit gamma isoform X2
translation: MSNTADGSFSTASQGGGSTEAQHLLQTFWPRAMEEIRNLTPNDFKVQDLPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELSLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELKPPKRQEEVRQTVPSSEQVQYYFTLAQQPTTVQVQGQQQGQQGSGSTTIQPSQIIIGQPQQGQVVQGATVQQLQQVQVAQSQTTASSITTAPVTMQVGDGQQVQIVPAQNQTQQTQSNSGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLASGTTQQVGQTEVQQGQQQQQQQYSQFTDGQQLYQIQQVTMPAGQDITQPMFIQSTNQTTDGQPTQVTGE
SIO_010081: nfyc
subclass of: SO_0000673
so part of: nfyc
location: complement(join(1736914..1737033,1747405..1747476,1749667..1749777,1750905..1751057,1760281..1760358,1762281..1762451,1786451..1786546,1789693..1789806,1792661..1792732,1796110..1796232))
location: region:1736914-1796232:-1
so has part: feature:1796110-1796232:-1:exon
so has part: feature:1792661-1792732:-1:exon
so has part: feature:1789693-1789806:-1:exon
so has part: feature:1786451-1786546:-1:exon
so has part: feature:1762281-1762451:-1:exon
so has part: feature:1760281-1760358:-1:exon
so has part: feature:1750905-1751057:-1:exon
so has part: feature:1749667-1749777:-1:exon
so has part: feature:1747405-1747476:-1:exon
so has part: feature:1736914-1737033:-1:exon

XP_048414244.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1796110-1796232:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1792661-1792732:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1789693-1789806:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1786451-1786546:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1762281-1762451:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1760281-1760358:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1750905-1751057:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1749667-1749777:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1747405-1747476:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1736914-1737033:-1:exon

nfyc
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: nfyc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear transcription factor Y subunit gamma isoform X2
translation: MSNTADGSFSTASQGGGSTEAQHLLQTFWPRAMEEIRNLTPNDFKVQDLPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELSLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELKPPKRQEEVRQTVPSSEQVQYYFTLAQQPTTVQVQGQQQGQQGSGSTTIQPSQIIIGQPQQGQVVQGATVQQLQQVQVAQSQTTASSITTAPVTMQVGDGQQVQIVPAQNQTQQTQSNSGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLASGTTQQVGQTEVQQGQQQQQQQYSQFTDGQQLYQIQQVTMPAGQDITQPMFIQSTNQTTDGQPTQVTGE
SIO_010081: nfyc
subclass of: SO_0000673
so part of: nfyc
location: complement(join(1736914..1737033,1747405..1747476,1749667..1749777,1750905..1751057,1760281..1760358,1762281..1762451,1786451..1786546,1789693..1789806,1792661..1792732,1796110..1796232))
location: region:1736914-1796232:-1
so has part: feature:1796110-1796232:-1:exon
so has part: feature:1792661-1792732:-1:exon
so has part: feature:1789693-1789806:-1:exon
so has part: feature:1786451-1786546:-1:exon
so has part: feature:1762281-1762451:-1:exon
so has part: feature:1760281-1760358:-1:exon
so has part: feature:1750905-1751057:-1:exon
so has part: feature:1749667-1749777:-1:exon
so has part: feature:1747405-1747476:-1:exon
so has part: feature:1736914-1737033:-1:exon

XP_048414245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1796110-1796232:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1792661-1792732:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1789693-1789806:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1786451-1786546:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1762281-1762451:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1760281-1760358:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1750905-1751057:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1749667-1749777:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1747405-1747476:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1736914-1737033:-1:exon

rims3
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: rims3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1994105..2190230
location: region:1994105-2190230:1
so has part: feature:1994105-2190230:1:exon
subclass of: SO_0000010

125464859
type: Gene
SIO_000068: ncbigene

position:1994105:1
position: 1994105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2190230:1
position: 2190230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1994105-2190230:1:exon

rims3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: rims3
product: regulating synaptic membrane exocytosis 3, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_048557713.1
SIO_010081: rims3
subclass of: SO_0000673
so part of: rims3
location: join(1994105..1994204,2060811..2061088,2123844..2123918,2156905..2157046,2159301..2159413,2175315..2175416,2180203..2180342,2185963..2190230)
location: region:1994105-2190230:1
so has part: feature:1994105-1994204:1:exon
so has part: feature:2060811-2061088:1:exon
so has part: feature:2123844-2123918:1:exon
so has part: feature:2156905-2157046:1:exon
so has part: feature:2159301-2159413:1:exon
so has part: feature:2175315-2175416:1:exon
so has part: feature:2180203-2180342:1:exon
so has part: feature:2185963-2190230:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1994105-1994204:1:exon

position:1994204:1
position: 1994204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2060811-2061088:1:exon

position:2060811:1
position: 2060811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2061088:1
position: 2061088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2123844-2123918:1:exon

position:2123844:1
position: 2123844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2123918:1
position: 2123918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2156905-2157046:1:exon

position:2156905:1
position: 2156905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2157046:1
position: 2157046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2159301-2159413:1:exon

position:2159301:1
position: 2159301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2159413:1
position: 2159413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2175315-2175416:1:exon

position:2175315:1
position: 2175315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2175416:1
position: 2175416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2180203-2180342:1:exon

position:2180203:1
position: 2180203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2180342:1
position: 2180342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2185963-2190230:1:exon

position:2185963:1
position: 2185963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

rims3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: rims3
product: regulating synaptic membrane exocytosis 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048557711.1
SIO_010081: rims3
subclass of: SO_0000673
so part of: rims3
location: join(1994530..1994657,2045272..2045361,2060811..2061088,2123844..2123918,2156905..2157046,2159301..2159413,2175315..2175416,2180203..2180342,2185963..2190230)
location: region:1994530-2190230:1
so has part: feature:1994530-1994657:1:exon
so has part: feature:2045272-2045361:1:exon
so has part: feature:2060811-2061088:1:exon
so has part: feature:2123844-2123918:1:exon
so has part: feature:2156905-2157046:1:exon
so has part: feature:2159301-2159413:1:exon
so has part: feature:2175315-2175416:1:exon
so has part: feature:2180203-2180342:1:exon
so has part: feature:2185963-2190230:1:exon

position:1994530:1
position: 1994530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1994530-1994657:1:exon

position:1994657:1
position: 1994657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2045272-2045361:1:exon

position:2045272:1
position: 2045272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2045361:1
position: 2045361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2060811-2061088:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2123844-2123918:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2156905-2157046:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2159301-2159413:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2175315-2175416:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2180203-2180342:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2185963-2190230:1:exon

rims3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: rims3
product: regulating synaptic membrane exocytosis 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_048557707.1
SIO_010081: rims3
subclass of: SO_0000673
so part of: rims3
location: join(1994530..1994657,2060811..2061088,2123844..2123918,2156905..2157046,2159301..2159413,2175315..2175416,2180203..2180342,2185963..2190230)
location: region:1994530-2190230:1
so has part: feature:1994530-1994657:1:exon
so has part: feature:2060811-2061088:1:exon
so has part: feature:2123844-2123918:1:exon
so has part: feature:2156905-2157046:1:exon
so has part: feature:2159301-2159413:1:exon
so has part: feature:2175315-2175416:1:exon
so has part: feature:2180203-2180342:1:exon
so has part: feature:2185963-2190230:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1994530-1994657:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2060811-2061088:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2123844-2123918:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2156905-2157046:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2159301-2159413:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2175315-2175416:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2180203-2180342:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2185963-2190230:1:exon

rims3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: rims3
product: regulating synaptic membrane exocytosis 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_048557709.1
SIO_010081: rims3
subclass of: SO_0000673
so part of: rims3
location: join(1994692..1994787,2060811..2061088,2123844..2123918,2156905..2157046,2159301..2159413,2175315..2175416,2180203..2180342,2185963..2190230)
location: region:1994692-2190230:1
so has part: feature:1994692-1994787:1:exon
so has part: feature:2060811-2061088:1:exon
so has part: feature:2123844-2123918:1:exon
so has part: feature:2156905-2157046:1:exon
so has part: feature:2159301-2159413:1:exon
so has part: feature:2175315-2175416:1:exon
so has part: feature:2180203-2180342:1:exon
so has part: feature:2185963-2190230:1:exon

position:1994692:1
position: 1994692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1994692-1994787:1:exon

position:1994787:1
position: 1994787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2060811-2061088:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2123844-2123918:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2156905-2157046:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2159301-2159413:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2175315-2175416:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2180203-2180342:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2185963-2190230:1:exon

rims3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: rims3
product: regulating synaptic membrane exocytosis 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_048557708.1
SIO_010081: rims3
subclass of: SO_0000673
so part of: rims3
location: join(1994717..1994850,2045272..2045361,2060811..2061088,2123844..2123918,2156905..2157046,2159301..2159413,2175315..2175416,2180203..2180342,2185963..2190230)
location: region:1994717-2190230:1
so has part: feature:1994717-1994850:1:exon
so has part: feature:2045272-2045361:1:exon
so has part: feature:2060811-2061088:1:exon
so has part: feature:2123844-2123918:1:exon
so has part: feature:2156905-2157046:1:exon
so has part: feature:2159301-2159413:1:exon
so has part: feature:2175315-2175416:1:exon
so has part: feature:2180203-2180342:1:exon
so has part: feature:2185963-2190230:1:exon

position:1994717:1
position: 1994717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1994717-1994850:1:exon

position:1994850:1
position: 1994850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2045272-2045361:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2060811-2061088:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2123844-2123918:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2156905-2157046:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2159301-2159413:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2175315-2175416:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2180203-2180342:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2185963-2190230:1:exon

rims3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: rims3
product: regulating synaptic membrane exocytosis 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_048557706.1
SIO_010081: rims3
subclass of: SO_0000673
so part of: rims3
location: join(1994717..1994850,2060811..2061088,2123844..2123918,2156905..2157046,2159301..2159413,2175315..2175416,2180203..2180342,2185963..2190230)
location: region:1994717-2190230:1
so has part: feature:1994717-1994850:1:exon
so has part: feature:2060811-2061088:1:exon
so has part: feature:2123844-2123918:1:exon
so has part: feature:2156905-2157046:1:exon
so has part: feature:2159301-2159413:1:exon
so has part: feature:2175315-2175416:1:exon
so has part: feature:2180203-2180342:1:exon
so has part: feature:2185963-2190230:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1994717-1994850:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2060811-2061088:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2123844-2123918:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2156905-2157046:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2159301-2159413:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2175315-2175416:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2180203-2180342:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2185963-2190230:1:exon

rims3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: rims3
product: regulating synaptic membrane exocytosis 3, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_048557714.1
SIO_010081: rims3
subclass of: SO_0000673
so part of: rims3
location: join(1994717..1994850,2060811..2061088,2123844..2123918,2156908..2157046,2159301..2159413,2175315..2175416,2180203..2180342,2185963..2190230)
location: region:1994717-2190230:1
so has part: feature:1994717-1994850:1:exon
so has part: feature:2060811-2061088:1:exon
so has part: feature:2123844-2123918:1:exon
so has part: feature:2156908-2157046:1:exon
so has part: feature:2159301-2159413:1:exon
so has part: feature:2175315-2175416:1:exon
so has part: feature:2180203-2180342:1:exon
so has part: feature:2185963-2190230:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1994717-1994850:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2060811-2061088:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2123844-2123918:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2156908-2157046:1:exon

position:2156908:1
position: 2156908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2159301-2159413:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2175315-2175416:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2180203-2180342:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2185963-2190230:1:exon

rims3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: rims3
product: regulating synaptic membrane exocytosis 3, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048557715.1
SIO_010081: rims3
subclass of: SO_0000673
so part of: rims3
location: join(1994717..1994850,2060811..2061088,2156905..2157046,2159301..2159413,2175315..2175416,2180203..2180342,2185963..2190230)
location: region:1994717-2190230:1
so has part: feature:1994717-1994850:1:exon
so has part: feature:2060811-2061088:1:exon
so has part: feature:2156905-2157046:1:exon
so has part: feature:2159301-2159413:1:exon
so has part: feature:2175315-2175416:1:exon
so has part: feature:2180203-2180342:1:exon
so has part: feature:2185963-2190230:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1994717-1994850:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2060811-2061088:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2156905-2157046:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2159301-2159413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2175315-2175416:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2180203-2180342:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2185963-2190230:1:exon

rims3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: rims3
product: regulating synaptic membrane exocytosis 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048557710.1
SIO_010081: rims3
subclass of: SO_0000673
so part of: rims3
location: join(1994739..1994787,2000705..2000795,2045272..2045361,2060811..2061088,2123844..2123918,2156905..2157046,2159301..2159413,2175315..2175416,2180203..2180342,2185963..2190230)
location: region:1994739-2190230:1
so has part: feature:1994739-1994787:1:exon
so has part: feature:2000705-2000795:1:exon
so has part: feature:2045272-2045361:1:exon
so has part: feature:2060811-2061088:1:exon
so has part: feature:2123844-2123918:1:exon
so has part: feature:2156905-2157046:1:exon
so has part: feature:2159301-2159413:1:exon
so has part: feature:2175315-2175416:1:exon
so has part: feature:2180203-2180342:1:exon
so has part: feature:2185963-2190230:1:exon

position:1994739:1
position: 1994739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1994739-1994787:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2000705-2000795:1:exon

position:2000705:1
position: 2000705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2000795:1
position: 2000795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2045272-2045361:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2060811-2061088:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2123844-2123918:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2156905-2157046:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2159301-2159413:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2175315-2175416:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2180203-2180342:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2185963-2190230:1:exon

rims3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: rims3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulating synaptic membrane exocytosis protein 3 isoform X1
translation: MYNGATSKTARSVLRSSSISGEMYDMEKSNTSQQEAVADNAIKKRRSSLGAKMVAIVGLSQWSKSTTQLNQTAPKNISAVLCQGIVGHWLAPMIAPREAATKKLRSNIRRSTETGIAMEMRNRVTRQGSRESTDGSTNSNSSDGNLVFPTARLGADGQFSDFLDGIGPAQLVGRQTLAAPSMGDIHIGMADRSGQLEVEIIQARGLTPKPGTKALPAPYIKVYLLENGVCIAKRKTKISRKSLDPVYQQALLFDEGPQGKVLQVIVWGDYGRMDHKYFMGMAQILLEELDLSTLVTGWYKLFPSSSLVDSTVAPLTRRLSQSSLDSSTGPAGHST
SIO_010081: rims3
subclass of: SO_0000673
so part of: rims3
location: join(2060872..2061088,2123844..2123918,2156905..2157046,2159301..2159413,2175315..2175416,2180203..2180342,2185963..2186181)
location: region:2060872-2186181:1
so has part: feature:2060872-2061088:1:exon
so has part: feature:2123844-2123918:1:exon
so has part: feature:2156905-2157046:1:exon
so has part: feature:2159301-2159413:1:exon
so has part: feature:2175315-2175416:1:exon
so has part: feature:2180203-2180342:1:exon
so has part: feature:2185963-2186181:1:exon

XP_048413663.1
type: Protein
SIO_000068: ncbiprotein

position:2060872:1
position: 2060872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2186181:1
position: 2186181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2060872-2061088:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2123844-2123918:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2156905-2157046:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2159301-2159413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2175315-2175416:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2180203-2180342:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2185963-2186181:1:exon

rims3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: rims3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulating synaptic membrane exocytosis protein 3 isoform X1
translation: MYNGATSKTARSVLRSSSISGEMYDMEKSNTSQQEAVADNAIKKRRSSLGAKMVAIVGLSQWSKSTTQLNQTAPKNISAVLCQGIVGHWLAPMIAPREAATKKLRSNIRRSTETGIAMEMRNRVTRQGSRESTDGSTNSNSSDGNLVFPTARLGADGQFSDFLDGIGPAQLVGRQTLAAPSMGDIHIGMADRSGQLEVEIIQARGLTPKPGTKALPAPYIKVYLLENGVCIAKRKTKISRKSLDPVYQQALLFDEGPQGKVLQVIVWGDYGRMDHKYFMGMAQILLEELDLSTLVTGWYKLFPSSSLVDSTVAPLTRRLSQSSLDSSTGPAGHST
SIO_010081: rims3
subclass of: SO_0000673
so part of: rims3
location: join(2060872..2061088,2123844..2123918,2156905..2157046,2159301..2159413,2175315..2175416,2180203..2180342,2185963..2186181)
location: region:2060872-2186181:1
so has part: feature:2060872-2061088:1:exon
so has part: feature:2123844-2123918:1:exon
so has part: feature:2156905-2157046:1:exon
so has part: feature:2159301-2159413:1:exon
so has part: feature:2175315-2175416:1:exon
so has part: feature:2180203-2180342:1:exon
so has part: feature:2185963-2186181:1:exon

XP_048413664.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2060872-2061088:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2123844-2123918:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2156905-2157046:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2159301-2159413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2175315-2175416:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2180203-2180342:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2185963-2186181:1:exon

rims3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: rims3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulating synaptic membrane exocytosis protein 3 isoform X1
translation: MYNGATSKTARSVLRSSSISGEMYDMEKSNTSQQEAVADNAIKKRRSSLGAKMVAIVGLSQWSKSTTQLNQTAPKNISAVLCQGIVGHWLAPMIAPREAATKKLRSNIRRSTETGIAMEMRNRVTRQGSRESTDGSTNSNSSDGNLVFPTARLGADGQFSDFLDGIGPAQLVGRQTLAAPSMGDIHIGMADRSGQLEVEIIQARGLTPKPGTKALPAPYIKVYLLENGVCIAKRKTKISRKSLDPVYQQALLFDEGPQGKVLQVIVWGDYGRMDHKYFMGMAQILLEELDLSTLVTGWYKLFPSSSLVDSTVAPLTRRLSQSSLDSSTGPAGHST
SIO_010081: rims3
subclass of: SO_0000673
so part of: rims3
location: join(2060872..2061088,2123844..2123918,2156905..2157046,2159301..2159413,2175315..2175416,2180203..2180342,2185963..2186181)
location: region:2060872-2186181:1
so has part: feature:2060872-2061088:1:exon
so has part: feature:2123844-2123918:1:exon
so has part: feature:2156905-2157046:1:exon
so has part: feature:2159301-2159413:1:exon
so has part: feature:2175315-2175416:1:exon
so has part: feature:2180203-2180342:1:exon
so has part: feature:2185963-2186181:1:exon

XP_048413665.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2060872-2061088:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2123844-2123918:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2156905-2157046:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2159301-2159413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2175315-2175416:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2180203-2180342:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2185963-2186181:1:exon

rims3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: rims3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulating synaptic membrane exocytosis protein 3 isoform X1
translation: MYNGATSKTARSVLRSSSISGEMYDMEKSNTSQQEAVADNAIKKRRSSLGAKMVAIVGLSQWSKSTTQLNQTAPKNISAVLCQGIVGHWLAPMIAPREAATKKLRSNIRRSTETGIAMEMRNRVTRQGSRESTDGSTNSNSSDGNLVFPTARLGADGQFSDFLDGIGPAQLVGRQTLAAPSMGDIHIGMADRSGQLEVEIIQARGLTPKPGTKALPAPYIKVYLLENGVCIAKRKTKISRKSLDPVYQQALLFDEGPQGKVLQVIVWGDYGRMDHKYFMGMAQILLEELDLSTLVTGWYKLFPSSSLVDSTVAPLTRRLSQSSLDSSTGPAGHST
SIO_010081: rims3
subclass of: SO_0000673
so part of: rims3
location: join(2060872..2061088,2123844..2123918,2156905..2157046,2159301..2159413,2175315..2175416,2180203..2180342,2185963..2186181)
location: region:2060872-2186181:1
so has part: feature:2060872-2061088:1:exon
so has part: feature:2123844-2123918:1:exon
so has part: feature:2156905-2157046:1:exon
so has part: feature:2159301-2159413:1:exon
so has part: feature:2175315-2175416:1:exon
so has part: feature:2180203-2180342:1:exon
so has part: feature:2185963-2186181:1:exon

XP_048413666.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2060872-2061088:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2123844-2123918:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2156905-2157046:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2159301-2159413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2175315-2175416:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2180203-2180342:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2185963-2186181:1:exon

rims3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: rims3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulating synaptic membrane exocytosis protein 3 isoform X1
translation: MYNGATSKTARSVLRSSSISGEMYDMEKSNTSQQEAVADNAIKKRRSSLGAKMVAIVGLSQWSKSTTQLNQTAPKNISAVLCQGIVGHWLAPMIAPREAATKKLRSNIRRSTETGIAMEMRNRVTRQGSRESTDGSTNSNSSDGNLVFPTARLGADGQFSDFLDGIGPAQLVGRQTLAAPSMGDIHIGMADRSGQLEVEIIQARGLTPKPGTKALPAPYIKVYLLENGVCIAKRKTKISRKSLDPVYQQALLFDEGPQGKVLQVIVWGDYGRMDHKYFMGMAQILLEELDLSTLVTGWYKLFPSSSLVDSTVAPLTRRLSQSSLDSSTGPAGHST
SIO_010081: rims3
subclass of: SO_0000673
so part of: rims3
location: join(2060872..2061088,2123844..2123918,2156905..2157046,2159301..2159413,2175315..2175416,2180203..2180342,2185963..2186181)
location: region:2060872-2186181:1
so has part: feature:2060872-2061088:1:exon
so has part: feature:2123844-2123918:1:exon
so has part: feature:2156905-2157046:1:exon
so has part: feature:2159301-2159413:1:exon
so has part: feature:2175315-2175416:1:exon
so has part: feature:2180203-2180342:1:exon
so has part: feature:2185963-2186181:1:exon

XP_048413667.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2060872-2061088:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2123844-2123918:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2156905-2157046:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2159301-2159413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2175315-2175416:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2180203-2180342:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2185963-2186181:1:exon

rims3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: rims3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulating synaptic membrane exocytosis protein 3 isoform X1
translation: MYNGATSKTARSVLRSSSISGEMYDMEKSNTSQQEAVADNAIKKRRSSLGAKMVAIVGLSQWSKSTTQLNQTAPKNISAVLCQGIVGHWLAPMIAPREAATKKLRSNIRRSTETGIAMEMRNRVTRQGSRESTDGSTNSNSSDGNLVFPTARLGADGQFSDFLDGIGPAQLVGRQTLAAPSMGDIHIGMADRSGQLEVEIIQARGLTPKPGTKALPAPYIKVYLLENGVCIAKRKTKISRKSLDPVYQQALLFDEGPQGKVLQVIVWGDYGRMDHKYFMGMAQILLEELDLSTLVTGWYKLFPSSSLVDSTVAPLTRRLSQSSLDSSTGPAGHST
SIO_010081: rims3
subclass of: SO_0000673
so part of: rims3
location: join(2060872..2061088,2123844..2123918,2156905..2157046,2159301..2159413,2175315..2175416,2180203..2180342,2185963..2186181)
location: region:2060872-2186181:1
so has part: feature:2060872-2061088:1:exon
so has part: feature:2123844-2123918:1:exon
so has part: feature:2156905-2157046:1:exon
so has part: feature:2159301-2159413:1:exon
so has part: feature:2175315-2175416:1:exon
so has part: feature:2180203-2180342:1:exon
so has part: feature:2185963-2186181:1:exon

XP_048413668.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2060872-2061088:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2123844-2123918:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2156905-2157046:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2159301-2159413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2175315-2175416:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2180203-2180342:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2185963-2186181:1:exon

rims3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: rims3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulating synaptic membrane exocytosis protein 3 isoform X1
translation: MYNGATSKTARSVLRSSSISGEMYDMEKSNTSQQEAVADNAIKKRRSSLGAKMVAIVGLSQWSKSTTQLNQTAPKNISAVLCQGIVGHWLAPMIAPREAATKKLRSNIRRSTETGIAMEMRNRVTRQGSRESTDGSTNSNSSDGNLVFPTARLGADGQFSDFLDGIGPAQLVGRQTLAAPSMGDIHIGMADRSGQLEVEIIQARGLTPKPGTKALPAPYIKVYLLENGVCIAKRKTKISRKSLDPVYQQALLFDEGPQGKVLQVIVWGDYGRMDHKYFMGMAQILLEELDLSTLVTGWYKLFPSSSLVDSTVAPLTRRLSQSSLDSSTGPAGHST
SIO_010081: rims3
subclass of: SO_0000673
so part of: rims3
location: join(2060872..2061088,2123844..2123918,2156905..2157046,2159301..2159413,2175315..2175416,2180203..2180342,2185963..2186181)
location: region:2060872-2186181:1
so has part: feature:2060872-2061088:1:exon
so has part: feature:2123844-2123918:1:exon
so has part: feature:2156905-2157046:1:exon
so has part: feature:2159301-2159413:1:exon
so has part: feature:2175315-2175416:1:exon
so has part: feature:2180203-2180342:1:exon
so has part: feature:2185963-2186181:1:exon

XP_048413670.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2060872-2061088:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2123844-2123918:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2156905-2157046:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2159301-2159413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2175315-2175416:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2180203-2180342:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2185963-2186181:1:exon

rims3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: rims3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulating synaptic membrane exocytosis protein 3 isoform X2
translation: MYNGATSKTARSVLRSSSISGEMYDMEKSNTSQQEAVADNAIKKRRSSLGAKMVAIVGLSQWSKSTTQLNQTAPKNISAVLCQGIVGHWLAPMIAPRAATKKLRSNIRRSTETGIAMEMRNRVTRQGSRESTDGSTNSNSSDGNLVFPTARLGADGQFSDFLDGIGPAQLVGRQTLAAPSMGDIHIGMADRSGQLEVEIIQARGLTPKPGTKALPAPYIKVYLLENGVCIAKRKTKISRKSLDPVYQQALLFDEGPQGKVLQVIVWGDYGRMDHKYFMGMAQILLEELDLSTLVTGWYKLFPSSSLVDSTVAPLTRRLSQSSLDSSTGPAGHST
SIO_010081: rims3
subclass of: SO_0000673
so part of: rims3
location: join(2060872..2061088,2123844..2123918,2156908..2157046,2159301..2159413,2175315..2175416,2180203..2180342,2185963..2186181)
location: region:2060872-2186181:1
so has part: feature:2060872-2061088:1:exon
so has part: feature:2123844-2123918:1:exon
so has part: feature:2156908-2157046:1:exon
so has part: feature:2159301-2159413:1:exon
so has part: feature:2175315-2175416:1:exon
so has part: feature:2180203-2180342:1:exon
so has part: feature:2185963-2186181:1:exon

XP_048413671.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2060872-2061088:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2123844-2123918:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2156908-2157046:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2159301-2159413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2175315-2175416:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2180203-2180342:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2185963-2186181:1:exon

rims3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: rims3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulating synaptic membrane exocytosis protein 3 isoform X3
translation: MYNGATSKTARSVLRSSSISGEMYDMEKSNTSQQEAVADNAIKKRRSSLGAKMVAIVGLSQWSKSTTQLNQTEAATKKLRSNIRRSTETGIAMEMRNRVTRQGSRESTDGSTNSNSSDGNLVFPTARLGADGQFSDFLDGIGPAQLVGRQTLAAPSMGDIHIGMADRSGQLEVEIIQARGLTPKPGTKALPAPYIKVYLLENGVCIAKRKTKISRKSLDPVYQQALLFDEGPQGKVLQVIVWGDYGRMDHKYFMGMAQILLEELDLSTLVTGWYKLFPSSSLVDSTVAPLTRRLSQSSLDSSTGPAGHST
SIO_010081: rims3
subclass of: SO_0000673
so part of: rims3
location: join(2060872..2061088,2156905..2157046,2159301..2159413,2175315..2175416,2180203..2180342,2185963..2186181)
location: region:2060872-2186181:1
so has part: feature:2060872-2061088:1:exon
so has part: feature:2156905-2157046:1:exon
so has part: feature:2159301-2159413:1:exon
so has part: feature:2175315-2175416:1:exon
so has part: feature:2180203-2180342:1:exon
so has part: feature:2185963-2186181:1:exon

XP_048413672.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2060872-2061088:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2156905-2157046:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2159301-2159413:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2175315-2175416:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2180203-2180342:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2185963-2186181:1:exon

LOC125464974
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125464974
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2201724..2265920)
location: region:2201724-2265920:-1
so has part: feature:2201724-2265920:-1:exon
subclass of: SO_0000010

125464974
type: Gene
SIO_000068: ncbigene

position:2201724:-1
position: 2201724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2265920:-1
position: 2265920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2201724-2265920:-1:exon

LOC125464974
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125464974
product: stromal membrane-associated protein 2-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048557964.1
SIO_010081: LOC125464974
subclass of: SO_0000673
so part of: LOC125464974
location: complement(join(2201724..2206312,2209901..2210208,2216906..2217053,2219422..2219549,2222146..2222227,2222848..2222928,2224350..2224428,2228785..2228870,2233003..2233136,2265795..2265920))
location: region:2201724-2265920:-1
so has part: feature:2265795-2265920:-1:exon
so has part: feature:2233003-2233136:-1:exon
so has part: feature:2228785-2228870:-1:exon
so has part: feature:2224350-2224428:-1:exon
so has part: feature:2222848-2222928:-1:exon
so has part: feature:2222146-2222227:-1:exon
so has part: feature:2219422-2219549:-1:exon
so has part: feature:2216906-2217053:-1:exon
so has part: feature:2209901-2210208:-1:exon
so has part: feature:2201724-2206312:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2265795-2265920:-1:exon

position:2265795:-1
position: 2265795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2233003-2233136:-1:exon

position:2233003:-1
position: 2233003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2233136:-1
position: 2233136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2228785-2228870:-1:exon

position:2228785:-1
position: 2228785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2228870:-1
position: 2228870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2224350-2224428:-1:exon

position:2224350:-1
position: 2224350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2224428:-1
position: 2224428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2222848-2222928:-1:exon

position:2222848:-1
position: 2222848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2222928:-1
position: 2222928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2222146-2222227:-1:exon

position:2222146:-1
position: 2222146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2222227:-1
position: 2222227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2219422-2219549:-1:exon

position:2219422:-1
position: 2219422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2219549:-1
position: 2219549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2216906-2217053:-1:exon

position:2216906:-1
position: 2216906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2217053:-1
position: 2217053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2209901-2210208:-1:exon

position:2209901:-1
position: 2209901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2210208:-1
position: 2210208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2201724-2206312:-1:exon

position:2206312:-1
position: 2206312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125464974
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125464974
product: stromal membrane-associated protein 2-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048557963.1
SIO_010081: LOC125464974
subclass of: SO_0000673
so part of: LOC125464974
location: complement(join(2201724..2206312,2209901..2210208,2216906..2217056,2219422..2219549,2222146..2222227,2222848..2222928,2224350..2224428,2228785..2228870,2233003..2233136,2265795..2265920))
location: region:2201724-2265920:-1
so has part: feature:2265795-2265920:-1:exon
so has part: feature:2233003-2233136:-1:exon
so has part: feature:2228785-2228870:-1:exon
so has part: feature:2224350-2224428:-1:exon
so has part: feature:2222848-2222928:-1:exon
so has part: feature:2222146-2222227:-1:exon
so has part: feature:2219422-2219549:-1:exon
so has part: feature:2216906-2217056:-1:exon
so has part: feature:2209901-2210208:-1:exon
so has part: feature:2201724-2206312:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2265795-2265920:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2233003-2233136:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2228785-2228870:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2224350-2224428:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2222848-2222928:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2222146-2222227:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2219422-2219549:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2216906-2217056:-1:exon

position:2217056:-1
position: 2217056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2209901-2210208:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2201724-2206312:-1:exon

LOC125464974
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125464974
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: stromal membrane-associated protein 2-like isoform X2
translation: MKMATRAERERQQRQNERHQEILGEMLLDSRECADCGSRGPRWASWNLGVFVCIRCAGIHRKLGVHISKVKSVNLDQWTPEQIQCIREMGNSKAKILYEAHLPANFKRPQMDQAVESFIRDKYEKKKYFDKSINIAAFRKENNKWKKEDEAKETKTAPVIFEKVKVPPKKDEQQQVKTSPSTPAGPVIDLLGLDAPAAAPTSNGTTCVNTAPSGDLDLFGPMVSNPLPDSSSFPNTVLASTPQEGAENLNLFAEPSLKPEDSGKKQLSKDSILSLYGSQTQVPTQGTMFMPSGQVPYAPCLPSGYTNFPPMGSAVTPTGGMMNNVGQTMGMMAPVTLPGGYVGGVQAGVMGMPSGMAAQQGAYVSGLAMPQPVYGVQQAQQLQWNITQMTQQMAGMNFYGANGMVNYGQSSVPMGAGAAPAAGQSVGTQMWK
SIO_010081: LOC125464974
subclass of: SO_0000673
so part of: LOC125464974
location: complement(join(2206178..2206312,2209901..2210208,2216906..2217053,2219422..2219549,2222146..2222227,2222848..2222928,2224350..2224428,2228785..2228870,2233003..2233136,2265795..2265912))
location: region:2206178-2265912:-1
so has part: feature:2265795-2265912:-1:exon
so has part: feature:2233003-2233136:-1:exon
so has part: feature:2228785-2228870:-1:exon
so has part: feature:2224350-2224428:-1:exon
so has part: feature:2222848-2222928:-1:exon
so has part: feature:2222146-2222227:-1:exon
so has part: feature:2219422-2219549:-1:exon
so has part: feature:2216906-2217053:-1:exon
so has part: feature:2209901-2210208:-1:exon
so has part: feature:2206178-2206312:-1:exon

XP_048413921.1
type: Protein
SIO_000068: ncbiprotein

position:2206178:-1
position: 2206178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2265912:-1
position: 2265912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2265795-2265912:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2233003-2233136:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2228785-2228870:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2224350-2224428:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2222848-2222928:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2222146-2222227:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2219422-2219549:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2216906-2217053:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2209901-2210208:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2206178-2206312:-1:exon

LOC125464974
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125464974
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: stromal membrane-associated protein 2-like isoform X1
translation: MKMATRAERERQQRQNERHQEILGEMLLDSRECADCGSRGPRWASWNLGVFVCIRCAGIHRKLGVHISKVKSVNLDQWTPEQIQCIREMGNSKAKILYEAHLPANFKRPQMDQAVESFIRDKYEKKKYFDKSINIAAFRKENNKWKKEDEAKETKTAPVIFEKVKVPPKKDEQQQVKTSPSTPAGPVIDLLGLDAPAAAPTSNGTTCVNTAPSGDLDLFGPMVSNPLPDSSSFPNTQVLASTPQEGAENLNLFAEPSLKPEDSGKKQLSKDSILSLYGSQTQVPTQGTMFMPSGQVPYAPCLPSGYTNFPPMGSAVTPTGGMMNNVGQTMGMMAPVTLPGGYVGGVQAGVMGMPSGMAAQQGAYVSGLAMPQPVYGVQQAQQLQWNITQMTQQMAGMNFYGANGMVNYGQSSVPMGAGAAPAAGQSVGTQMWK
SIO_010081: LOC125464974
subclass of: SO_0000673
so part of: LOC125464974
location: complement(join(2206178..2206312,2209901..2210208,2216906..2217056,2219422..2219549,2222146..2222227,2222848..2222928,2224350..2224428,2228785..2228870,2233003..2233136,2265795..2265912))
location: region:2206178-2265912:-1
so has part: feature:2265795-2265912:-1:exon
so has part: feature:2233003-2233136:-1:exon
so has part: feature:2228785-2228870:-1:exon
so has part: feature:2224350-2224428:-1:exon
so has part: feature:2222848-2222928:-1:exon
so has part: feature:2222146-2222227:-1:exon
so has part: feature:2219422-2219549:-1:exon
so has part: feature:2216906-2217056:-1:exon
so has part: feature:2209901-2210208:-1:exon
so has part: feature:2206178-2206312:-1:exon

XP_048413920.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2265795-2265912:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2233003-2233136:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2228785-2228870:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2224350-2224428:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2222848-2222928:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2222146-2222227:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2219422-2219549:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2216906-2217056:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2209901-2210208:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2206178-2206312:-1:exon

col9a2
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: col9a2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2265995..2453967
location: region:2265995-2453967:1
so has part: feature:2265995-2453967:1:exon
subclass of: SO_0000010

125465158
type: Gene
SIO_000068: ncbigene

position:2265995:1
position: 2265995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2453967:1
position: 2453967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2265995-2453967:1:exon

col9a2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: col9a2
product: procollagen, type IX, alpha 2, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558361.1
SIO_010081: col9a2
subclass of: SO_0000673
so part of: col9a2
location: join(2265995..2266123,2301799..2301870,2302519..2302554,2302665..2302727,2314422..2314475,2331089..2331124,2331355..2331378,2332789..2332842,2339781..2339834,2340938..2340985,2344542..2344598,2344837..2344890,2366925..2366978,2369641..2369694,2370501..2370554,2375119..2375172,2379494..2379547,2382128..2382181,2383372..2383425,2387534..2387578,2389004..2389057,2389172..2389225,2394096..2394149,2401820..2401891,2402107..2402142,2408733..2408777,2409649..2409681,2409895..2410041,2415973..2416027,2420550..2420738,2425871..2425948,2452164..2453967)
location: region:2265995-2453967:1
so has part: feature:2265995-2266123:1:exon
so has part: feature:2301799-2301870:1:exon
so has part: feature:2302519-2302554:1:exon
so has part: feature:2302665-2302727:1:exon
so has part: feature:2314422-2314475:1:exon
so has part: feature:2331089-2331124:1:exon
so has part: feature:2331355-2331378:1:exon
so has part: feature:2332789-2332842:1:exon
so has part: feature:2339781-2339834:1:exon
so has part: feature:2340938-2340985:1:exon
so has part: feature:2344542-2344598:1:exon
so has part: feature:2344837-2344890:1:exon
so has part: feature:2366925-2366978:1:exon
so has part: feature:2369641-2369694:1:exon
so has part: feature:2370501-2370554:1:exon
so has part: feature:2375119-2375172:1:exon
so has part: feature:2379494-2379547:1:exon
so has part: feature:2382128-2382181:1:exon
so has part: feature:2383372-2383425:1:exon
so has part: feature:2387534-2387578:1:exon
so has part: feature:2389004-2389057:1:exon
so has part: feature:2389172-2389225:1:exon
so has part: feature:2394096-2394149:1:exon
so has part: feature:2401820-2401891:1:exon
so has part: feature:2402107-2402142:1:exon
so has part: feature:2408733-2408777:1:exon
so has part: feature:2409649-2409681:1:exon
so has part: feature:2409895-2410041:1:exon
so has part: feature:2415973-2416027:1:exon
so has part: feature:2420550-2420738:1:exon
so has part: feature:2425871-2425948:1:exon
so has part: feature:2452164-2453967:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2265995-2266123:1:exon

position:2266123:1
position: 2266123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2301799-2301870:1:exon

position:2301799:1
position: 2301799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2301870:1
position: 2301870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2302519-2302554:1:exon

position:2302519:1
position: 2302519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2302554:1
position: 2302554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2302665-2302727:1:exon

position:2302665:1
position: 2302665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2302727:1
position: 2302727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2314422-2314475:1:exon

position:2314422:1
position: 2314422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2314475:1
position: 2314475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2331089-2331124:1:exon

position:2331089:1
position: 2331089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2331124:1
position: 2331124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2331355-2331378:1:exon

position:2331355:1
position: 2331355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2331378:1
position: 2331378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2332789-2332842:1:exon

position:2332789:1
position: 2332789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2332842:1
position: 2332842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2339781-2339834:1:exon

position:2339781:1
position: 2339781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2339834:1
position: 2339834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2340938-2340985:1:exon

position:2340938:1
position: 2340938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2340985:1
position: 2340985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2344542-2344598:1:exon

position:2344542:1
position: 2344542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2344598:1
position: 2344598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2344837-2344890:1:exon

position:2344837:1
position: 2344837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2344890:1
position: 2344890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2366925-2366978:1:exon

position:2366925:1
position: 2366925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2366978:1
position: 2366978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2369641-2369694:1:exon

position:2369641:1
position: 2369641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2369694:1
position: 2369694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2370501-2370554:1:exon

position:2370501:1
position: 2370501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2370554:1
position: 2370554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2375119-2375172:1:exon

position:2375119:1
position: 2375119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2375172:1
position: 2375172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2379494-2379547:1:exon

position:2379494:1
position: 2379494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2379547:1
position: 2379547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2382128-2382181:1:exon

position:2382128:1
position: 2382128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2382181:1
position: 2382181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2383372-2383425:1:exon

position:2383372:1
position: 2383372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2383425:1
position: 2383425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2387534-2387578:1:exon

position:2387534:1
position: 2387534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2387578:1
position: 2387578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2389004-2389057:1:exon

position:2389004:1
position: 2389004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2389057:1
position: 2389057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2389172-2389225:1:exon

position:2389172:1
position: 2389172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2389225:1
position: 2389225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2394096-2394149:1:exon

position:2394096:1
position: 2394096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2394149:1
position: 2394149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2401820-2401891:1:exon

position:2401820:1
position: 2401820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2401891:1
position: 2401891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2402107-2402142:1:exon

position:2402107:1
position: 2402107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2402142:1
position: 2402142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2408733-2408777:1:exon

position:2408733:1
position: 2408733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2408777:1
position: 2408777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2409649-2409681:1:exon

position:2409649:1
position: 2409649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2409681:1
position: 2409681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2409895-2410041:1:exon

position:2409895:1
position: 2409895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2410041:1
position: 2410041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2415973-2416027:1:exon

position:2415973:1
position: 2415973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2416027:1
position: 2416027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:2420550-2420738:1:exon

position:2420550:1
position: 2420550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2420738:1
position: 2420738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:2425871-2425948:1:exon

position:2425871:1
position: 2425871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2425948:1
position: 2425948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:2452164-2453967:1:exon

position:2452164:1
position: 2452164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

col9a2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: col9a2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-2(IX) chain isoform X1
translation: MEAGVELGGERSGITANQVRVQQGSWKTQAFKALLLHQGPFDEQRVVGSPGPAGIPGSDGIDGEHGPPGPPGPPGVKGDPGEPGLDGPQGDPGYDGLEGPKGEPGIPGRPGPKGQVGFPGPPGPPGAGTMGPRGPPGLIGLPGEIGRPGAKGAAGRLGAMGQPGPPGQQGLPGNLHGPEGSADLLCPTSCPPGLKGPQGLQGLKGHKGKPGPLGDSGIQGPPGIKGSTGISGEQGIPGQPGPQGLRGYPGMMGAKGEGGPRGYKGMVGPPGPMGLQGKQGPEGPLGDFGDKGERGIRGQHGRQGPSGLKGQNGLPGIDGKDGTPGVPGMKGGAGQSGIPGPAGPQGGAGLPGQPGQKGAAGSKGERGPQGMTGLTGPPGQMGEPGPEGEIGPPGPMGLKGDRGMPGETGPPGPRGKSGIKGERGPTGIPGPQGVPGFKGDKGFQGKTGPKGGVGDPGVQGLDGDKGEKGDSGEPGVEGQQGVMGEPGYRGPPGNPGEPGAQGRMGLPGPRGPNGERGVTGSTGRQGIAGRDAGDQHIVEVVLKMMQEQLAAVAVSAKRAVLGGAGMTGPPGPPGKTGPPGGQGDHGIPGPRGLPGLPGVQGQVGNTGPKGKQGEKGDRGEKGRGHPGLPGPPGITGPPGMPGRSINGRDGEQGVPGVPGQPGRPGLPGPPGIPGFCEAAACLGASAYLASGGGPDYKGP
SIO_010081: col9a2
subclass of: SO_0000673
so part of: col9a2
location: join(2266010..2266123,2301799..2301870,2302519..2302554,2302665..2302727,2314422..2314475,2331089..2331124,2331355..2331378,2332789..2332842,2339781..2339834,2340938..2340985,2344542..2344598,2344837..2344890,2366925..2366978,2369641..2369694,2370501..2370554,2375119..2375172,2379494..2379547,2382128..2382181,2383372..2383425,2387534..2387578,2389004..2389057,2389172..2389225,2394096..2394149,2401820..2401891,2402107..2402142,2408733..2408777,2409649..2409681,2409895..2410041,2415973..2416027,2420550..2420738,2425871..2425948,2452164..2452357)
location: region:2266010-2452357:1
so has part: feature:2266010-2266123:1:exon
so has part: feature:2301799-2301870:1:exon
so has part: feature:2302519-2302554:1:exon
so has part: feature:2302665-2302727:1:exon
so has part: feature:2314422-2314475:1:exon
so has part: feature:2331089-2331124:1:exon
so has part: feature:2331355-2331378:1:exon
so has part: feature:2332789-2332842:1:exon
so has part: feature:2339781-2339834:1:exon
so has part: feature:2340938-2340985:1:exon
so has part: feature:2344542-2344598:1:exon
so has part: feature:2344837-2344890:1:exon
so has part: feature:2366925-2366978:1:exon
so has part: feature:2369641-2369694:1:exon
so has part: feature:2370501-2370554:1:exon
so has part: feature:2375119-2375172:1:exon
so has part: feature:2379494-2379547:1:exon
so has part: feature:2382128-2382181:1:exon
so has part: feature:2383372-2383425:1:exon
so has part: feature:2387534-2387578:1:exon
so has part: feature:2389004-2389057:1:exon
so has part: feature:2389172-2389225:1:exon
so has part: feature:2394096-2394149:1:exon
so has part: feature:2401820-2401891:1:exon
so has part: feature:2402107-2402142:1:exon
so has part: feature:2408733-2408777:1:exon
so has part: feature:2409649-2409681:1:exon
so has part: feature:2409895-2410041:1:exon
so has part: feature:2415973-2416027:1:exon
so has part: feature:2420550-2420738:1:exon
so has part: feature:2425871-2425948:1:exon
so has part: feature:2452164-2452357:1:exon

XP_048414318.1
type: Protein
SIO_000068: ncbiprotein

position:2266010:1
position: 2266010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2452357:1
position: 2452357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2266010-2266123:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2301799-2301870:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2302519-2302554:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2302665-2302727:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2314422-2314475:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2331089-2331124:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2331355-2331378:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2332789-2332842:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2339781-2339834:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2340938-2340985:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2344542-2344598:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2344837-2344890:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2366925-2366978:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2369641-2369694:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2370501-2370554:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2375119-2375172:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2379494-2379547:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2382128-2382181:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2383372-2383425:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2387534-2387578:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2389004-2389057:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2389172-2389225:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2394096-2394149:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2401820-2401891:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2402107-2402142:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2408733-2408777:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2409649-2409681:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2409895-2410041:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2415973-2416027:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2420550-2420738:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2425871-2425948:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2452164-2452357:1:exon

col9a2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: col9a2
product: procollagen, type IX, alpha 2, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558363.1
SIO_010081: col9a2
subclass of: SO_0000673
so part of: col9a2
location: join(2300813..2301090,2301799..2301870,2302519..2302554,2302665..2302727,2314422..2314475,2331089..2331124,2331355..2331378,2332789..2332842,2339781..2339834,2340938..2340985,2344542..2344598,2344837..2344890,2366925..2366978,2369641..2369694,2370501..2370554,2375119..2375172,2379494..2379547,2382128..2382181,2383372..2383425,2387534..2387578,2389004..2389057,2389172..2389225,2394096..2394149,2401820..2401891,2402107..2402142,2408733..2408777,2409649..2409681,2409895..2410041,2415973..2416027,2420550..2420738,2425871..2425948,2452164..2453967)
location: region:2300813-2453967:1
so has part: feature:2300813-2301090:1:exon
so has part: feature:2301799-2301870:1:exon
so has part: feature:2302519-2302554:1:exon
so has part: feature:2302665-2302727:1:exon
so has part: feature:2314422-2314475:1:exon
so has part: feature:2331089-2331124:1:exon
so has part: feature:2331355-2331378:1:exon
so has part: feature:2332789-2332842:1:exon
so has part: feature:2339781-2339834:1:exon
so has part: feature:2340938-2340985:1:exon
so has part: feature:2344542-2344598:1:exon
so has part: feature:2344837-2344890:1:exon
so has part: feature:2366925-2366978:1:exon
so has part: feature:2369641-2369694:1:exon
so has part: feature:2370501-2370554:1:exon
so has part: feature:2375119-2375172:1:exon
so has part: feature:2379494-2379547:1:exon
so has part: feature:2382128-2382181:1:exon
so has part: feature:2383372-2383425:1:exon
so has part: feature:2387534-2387578:1:exon
so has part: feature:2389004-2389057:1:exon
so has part: feature:2389172-2389225:1:exon
so has part: feature:2394096-2394149:1:exon
so has part: feature:2401820-2401891:1:exon
so has part: feature:2402107-2402142:1:exon
so has part: feature:2408733-2408777:1:exon
so has part: feature:2409649-2409681:1:exon
so has part: feature:2409895-2410041:1:exon
so has part: feature:2415973-2416027:1:exon
so has part: feature:2420550-2420738:1:exon
so has part: feature:2425871-2425948:1:exon
so has part: feature:2452164-2453967:1:exon

position:2300813:1
position: 2300813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2300813-2301090:1:exon

position:2301090:1
position: 2301090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2301799-2301870:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2302519-2302554:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2302665-2302727:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2314422-2314475:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2331089-2331124:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2331355-2331378:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2332789-2332842:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2339781-2339834:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2340938-2340985:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2344542-2344598:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2344837-2344890:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2366925-2366978:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2369641-2369694:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2370501-2370554:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2375119-2375172:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2379494-2379547:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2382128-2382181:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2383372-2383425:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2387534-2387578:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2389004-2389057:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2389172-2389225:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2394096-2394149:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2401820-2401891:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2402107-2402142:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2408733-2408777:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2409649-2409681:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2409895-2410041:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2415973-2416027:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2420550-2420738:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2425871-2425948:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2452164-2453967:1:exon

col9a2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: col9a2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-2(IX) chain isoform X2
translation: MASVTGVWLRSGVLRLVVLLQIVSLCLTQGPFDEQRVVGSPGPAGIPGSDGIDGEHGPPGPPGPPGVKGDPGEPGLDGPQGDPGYDGLEGPKGEPGIPGRPGPKGQVGFPGPPGPPGAGTMGPRGPPGLIGLPGEIGRPGAKGAAGRLGAMGQPGPPGQQGLPGNLHGPEGSADLLCPTSCPPGLKGPQGLQGLKGHKGKPGPLGDSGIQGPPGIKGSTGISGEQGIPGQPGPQGLRGYPGMMGAKGEGGPRGYKGMVGPPGPMGLQGKQGPEGPLGDFGDKGERGIRGQHGRQGPSGLKGQNGLPGIDGKDGTPGVPGMKGGAGQSGIPGPAGPQGGAGLPGQPGQKGAAGSKGERGPQGMTGLTGPPGQMGEPGPEGEIGPPGPMGLKGDRGMPGETGPPGPRGKSGIKGERGPTGIPGPQGVPGFKGDKGFQGKTGPKGGVGDPGVQGLDGDKGEKGDSGEPGVEGQQGVMGEPGYRGPPGNPGEPGAQGRMGLPGPRGPNGERGVTGSTGRQGIAGRDAGDQHIVEVVLKMMQEQLAAVAVSAKRAVLGGAGMTGPPGPPGKTGPPGGQGDHGIPGPRGLPGLPGVQGQVGNTGPKGKQGEKGDRGEKGRGHPGLPGPPGITGPPGMPGRSINGRDGEQGVPGVPGQPGRPGLPGPPGIPGFCEAAACLGASAYLASGGGPDYKGP
SIO_010081: col9a2
subclass of: SO_0000673
so part of: col9a2
location: join(2301004..2301090,2301799..2301870,2302519..2302554,2302665..2302727,2314422..2314475,2331089..2331124,2331355..2331378,2332789..2332842,2339781..2339834,2340938..2340985,2344542..2344598,2344837..2344890,2366925..2366978,2369641..2369694,2370501..2370554,2375119..2375172,2379494..2379547,2382128..2382181,2383372..2383425,2387534..2387578,2389004..2389057,2389172..2389225,2394096..2394149,2401820..2401891,2402107..2402142,2408733..2408777,2409649..2409681,2409895..2410041,2415973..2416027,2420550..2420738,2425871..2425948,2452164..2452357)
location: region:2301004-2452357:1
so has part: feature:2301004-2301090:1:exon
so has part: feature:2301799-2301870:1:exon
so has part: feature:2302519-2302554:1:exon
so has part: feature:2302665-2302727:1:exon
so has part: feature:2314422-2314475:1:exon
so has part: feature:2331089-2331124:1:exon
so has part: feature:2331355-2331378:1:exon
so has part: feature:2332789-2332842:1:exon
so has part: feature:2339781-2339834:1:exon
so has part: feature:2340938-2340985:1:exon
so has part: feature:2344542-2344598:1:exon
so has part: feature:2344837-2344890:1:exon
so has part: feature:2366925-2366978:1:exon
so has part: feature:2369641-2369694:1:exon
so has part: feature:2370501-2370554:1:exon
so has part: feature:2375119-2375172:1:exon
so has part: feature:2379494-2379547:1:exon
so has part: feature:2382128-2382181:1:exon
so has part: feature:2383372-2383425:1:exon
so has part: feature:2387534-2387578:1:exon
so has part: feature:2389004-2389057:1:exon
so has part: feature:2389172-2389225:1:exon
so has part: feature:2394096-2394149:1:exon
so has part: feature:2401820-2401891:1:exon
so has part: feature:2402107-2402142:1:exon
so has part: feature:2408733-2408777:1:exon
so has part: feature:2409649-2409681:1:exon
so has part: feature:2409895-2410041:1:exon
so has part: feature:2415973-2416027:1:exon
so has part: feature:2420550-2420738:1:exon
so has part: feature:2425871-2425948:1:exon
so has part: feature:2452164-2452357:1:exon

XP_048414320.1
type: Protein
SIO_000068: ncbiprotein

position:2301004:1
position: 2301004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2301004-2301090:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2301799-2301870:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2302519-2302554:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2302665-2302727:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2314422-2314475:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2331089-2331124:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2331355-2331378:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2332789-2332842:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2339781-2339834:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2340938-2340985:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2344542-2344598:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2344837-2344890:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2366925-2366978:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2369641-2369694:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2370501-2370554:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2375119-2375172:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2379494-2379547:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2382128-2382181:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2383372-2383425:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2387534-2387578:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2389004-2389057:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2389172-2389225:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2394096-2394149:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2401820-2401891:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2402107-2402142:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2408733-2408777:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2409649-2409681:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2409895-2410041:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2415973-2416027:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2420550-2420738:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2425871-2425948:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2452164-2452357:1:exon

LOC125465161
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125465161
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2456696..2460401)
location: region:2456696-2460401:-1
so has part: feature:2456696-2460401:-1:exon
subclass of: SO_0000011

125465161
type: Gene
SIO_000068: ncbigene

position:2456696:-1
position: 2456696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2460401:-1
position: 2460401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2456696-2460401:-1:exon

LOC125465161
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 378071
nc RNA class: lncRNA
gene: LOC125465161
product: uncharacterized LOC125465161
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_007250183.1
SIO_010081: LOC125465161
subclass of: SO_0000673
so part of: LOC125465161
location: complement(join(2456696..2456817,2458054..2458128,2460291..2460401))
location: region:2456696-2460401:-1
so has part: feature:2460291-2460401:-1:exon
so has part: feature:2458054-2458128:-1:exon
so has part: feature:2456696-2456817:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2460291-2460401:-1:exon

position:2460291:-1
position: 2460291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2458054-2458128:-1:exon

position:2458054:-1
position: 2458054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2458128:-1
position: 2458128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2456696-2456817:-1:exon

position:2456817:-1
position: 2456817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

trit1
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: trit1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2460581..2494891
location: region:2460581-2494891:1
so has part: feature:2460581-2494891:1:exon
subclass of: SO_0000010

125465159
type: Gene
SIO_000068: ncbigene

position:2460581:1
position: 2460581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2494891:1
position: 2494891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2460581-2494891:1:exon

trit1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: trit1
product: tRNA isopentenyltransferase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_048558364.1
SIO_010081: trit1
subclass of: SO_0000673
so part of: trit1
location: join(2460581..2460880,2462900..2463037,2465251..2465349,2466067..2466239,2470966..2471108,2472969..2473080,2478456..2478565,2478840..2478917,2483248..2483357,2487467..2487584,2494139..2494891)
location: region:2460581-2494891:1
so has part: feature:2460581-2460880:1:exon
so has part: feature:2462900-2463037:1:exon
so has part: feature:2465251-2465349:1:exon
so has part: feature:2466067-2466239:1:exon
so has part: feature:2470966-2471108:1:exon
so has part: feature:2472969-2473080:1:exon
so has part: feature:2478456-2478565:1:exon
so has part: feature:2478840-2478917:1:exon
so has part: feature:2483248-2483357:1:exon
so has part: feature:2487467-2487584:1:exon
so has part: feature:2494139-2494891:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2460581-2460880:1:exon

position:2460880:1
position: 2460880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2462900-2463037:1:exon

position:2462900:1
position: 2462900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2463037:1
position: 2463037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2465251-2465349:1:exon

position:2465251:1
position: 2465251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2465349:1
position: 2465349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2466067-2466239:1:exon

position:2466067:1
position: 2466067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2466239:1
position: 2466239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2470966-2471108:1:exon

position:2470966:1
position: 2470966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2471108:1
position: 2471108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2472969-2473080:1:exon

position:2472969:1
position: 2472969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2473080:1
position: 2473080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2478456-2478565:1:exon

position:2478456:1
position: 2478456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2478565:1
position: 2478565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2478840-2478917:1:exon

position:2478840:1
position: 2478840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2478917:1
position: 2478917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2483248-2483357:1:exon

position:2483248:1
position: 2483248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2483357:1
position: 2483357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2487467-2487584:1:exon

position:2487467:1
position: 2487467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2487584:1
position: 2487584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2494139-2494891:1:exon

position:2494139:1
position: 2494139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

trit1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: trit1
product: tRNA isopentenyltransferase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_048558365.1
SIO_010081: trit1
subclass of: SO_0000673
so part of: trit1
location: join(2460581..2460880,2462900..2463025,2466067..2466239,2470966..2471108,2472969..2473080,2478456..2478565,2478840..2478917,2483248..2483357,2487467..2487584,2494139..2494891)
location: region:2460581-2494891:1
so has part: feature:2460581-2460880:1:exon
so has part: feature:2462900-2463025:1:exon
so has part: feature:2466067-2466239:1:exon
so has part: feature:2470966-2471108:1:exon
so has part: feature:2472969-2473080:1:exon
so has part: feature:2478456-2478565:1:exon
so has part: feature:2478840-2478917:1:exon
so has part: feature:2483248-2483357:1:exon
so has part: feature:2487467-2487584:1:exon
so has part: feature:2494139-2494891:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2460581-2460880:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2462900-2463025:1:exon

position:2463025:1
position: 2463025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2466067-2466239:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2470966-2471108:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2472969-2473080:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2478456-2478565:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2478840-2478917:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2483248-2483357:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2487467-2487584:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2494139-2494891:1:exon

trit1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 378071
gene: trit1
product: tRNA isopentenyltransferase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XR_007250182.1
SIO_010081: trit1
so part of: trit1
location: join(2460581..2460880,2462900..2463037,2465251..2465349,2466067..2466239,2470966..2471108,2472969..2473080,2478456..2478565,2478840..2478917,2483248..2483357,2487467..2487584,2493261..2493413,2494139..2494255)
location: region:2460581-2494255:1
so has part: feature:2460581-2460880:1:exon
so has part: feature:2462900-2463037:1:exon
so has part: feature:2465251-2465349:1:exon
so has part: feature:2466067-2466239:1:exon
so has part: feature:2470966-2471108:1:exon
so has part: feature:2472969-2473080:1:exon
so has part: feature:2478456-2478565:1:exon
so has part: feature:2478840-2478917:1:exon
so has part: feature:2483248-2483357:1:exon
so has part: feature:2487467-2487584:1:exon
so has part: feature:2493261-2493413:1:exon
so has part: feature:2494139-2494255:1:exon

position:2494255:1
position: 2494255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2460581-2460880:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2462900-2463037:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2465251-2465349:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2466067-2466239:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2470966-2471108:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2472969-2473080:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2478456-2478565:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2478840-2478917:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2483248-2483357:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2487467-2487584:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2493261-2493413:1:exon

position:2493261:1
position: 2493261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2493413:1
position: 2493413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2494139-2494255:1:exon

trit1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: trit1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA dimethylallyltransferase isoform X1
translation: MAGLPLVILGPTGSGKSRLALEIGRRLRGEIISADSMQVYKGLDIITNKVTREEQQLCRHHMISFLDPLVSYSVVDFRNKALSIIKNIIDRQKVPIIVGGTNYYIESLLWKVLVDTKEEKAFSAPDHAAGSRTPSPNRKEELEKLDCQELHKRLAEVDPEMAAKLHPHDKRKVARSLQVYEEVGVPHSKLLMKQRQEEGGGPLGGALRFPRPCILWLHADLSVLDERLDHRVDEMLAAGLLEELMGFHTLYNQQKIAENSQDYQHGIFQSIGFKEFHEYLTSNSSCTETREKLLNQGIAALKQVTKRYARKQNKWVRNRFLKRPGANVPPVYGLDVTDVSKWEETVLHPALQILESCLKGEEPPVLPLTVECDQNEEKRKRHVCELCDRIILGDREWKAHLKSKNHQYHLKRKKRTEAQLNTQSSSDISRNIPQDA
SIO_010081: trit1
subclass of: SO_0000673
so part of: trit1
location: join(2460767..2460880,2462900..2463037,2465251..2465349,2466067..2466239,2470966..2471108,2472969..2473080,2478456..2478565,2478840..2478917,2483248..2483357,2487467..2487584,2494139..2494254)
location: region:2460767-2494254:1
so has part: feature:2460767-2460880:1:exon
so has part: feature:2462900-2463037:1:exon
so has part: feature:2465251-2465349:1:exon
so has part: feature:2466067-2466239:1:exon
so has part: feature:2470966-2471108:1:exon
so has part: feature:2472969-2473080:1:exon
so has part: feature:2478456-2478565:1:exon
so has part: feature:2478840-2478917:1:exon
so has part: feature:2483248-2483357:1:exon
so has part: feature:2487467-2487584:1:exon
so has part: feature:2494139-2494254:1:exon

XP_048414321.1
type: Protein
SIO_000068: ncbiprotein

position:2460767:1
position: 2460767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2494254:1
position: 2494254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2460767-2460880:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2462900-2463037:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2465251-2465349:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2466067-2466239:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2470966-2471108:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2472969-2473080:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2478456-2478565:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2478840-2478917:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2483248-2483357:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2487467-2487584:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2494139-2494254:1:exon

trit1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: trit1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA dimethylallyltransferase isoform X2
translation: MAGLPLVILGPTGSGKSRLALEIGRRLRGEIISADSMQVYKGLDIITNKVTREEQQLCRHHMISFLDPLVSYSVVDFRNKEEKAFSAPDHAAGSRTPSPNRKEELEKLDCQELHKRLAEVDPEMAAKLHPHDKRKVARSLQVYEEVGVPHSKLLMKQRQEEGGGPLGGALRFPRPCILWLHADLSVLDERLDHRVDEMLAAGLLEELMGFHTLYNQQKIAENSQDYQHGIFQSIGFKEFHEYLTSNSSCTETREKLLNQGIAALKQVTKRYARKQNKWVRNRFLKRPGANVPPVYGLDVTDVSKWEETVLHPALQILESCLKGEEPPVLPLTVECDQNEEKRKRHVCELCDRIILGDREWKAHLKSKNHQYHLKRKKRTEAQLNTQSSSDISRNIPQDA
SIO_010081: trit1
subclass of: SO_0000673
so part of: trit1
location: join(2460767..2460880,2462900..2463025,2466067..2466239,2470966..2471108,2472969..2473080,2478456..2478565,2478840..2478917,2483248..2483357,2487467..2487584,2494139..2494254)
location: region:2460767-2494254:1
so has part: feature:2460767-2460880:1:exon
so has part: feature:2462900-2463025:1:exon
so has part: feature:2466067-2466239:1:exon
so has part: feature:2470966-2471108:1:exon
so has part: feature:2472969-2473080:1:exon
so has part: feature:2478456-2478565:1:exon
so has part: feature:2478840-2478917:1:exon
so has part: feature:2483248-2483357:1:exon
so has part: feature:2487467-2487584:1:exon
so has part: feature:2494139-2494254:1:exon

XP_048414322.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2460767-2460880:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2462900-2463025:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2466067-2466239:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2470966-2471108:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2472969-2473080:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2478456-2478565:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2478840-2478917:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2483248-2483357:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2487467-2487584:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2494139-2494254:1:exon

LOC125465160
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125465160
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2606369..2611757
location: region:2606369-2611757:1
so has part: feature:2606369-2611757:1:exon
subclass of: SO_0000010

125465160
type: Gene
SIO_000068: ncbigene

position:2606369:1
position: 2606369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2611757:1
position: 2611757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2606369-2611757:1:exon

LOC125465160
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465160
product: mucosal pentraxin-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558367.1
SIO_010081: LOC125465160
subclass of: SO_0000673
so part of: LOC125465160
location: join(2606369..2606432,2606562..2606637,2610212..2611757)
location: region:2606369-2611757:1
so has part: feature:2606369-2606432:1:exon
so has part: feature:2606562-2606637:1:exon
so has part: feature:2610212-2611757:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2606369-2606432:1:exon

position:2606432:1
position: 2606432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2606562-2606637:1:exon

position:2606562:1
position: 2606562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2606637:1
position: 2606637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2610212-2611757:1:exon

position:2610212:1
position: 2610212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125465160
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465160
product: mucosal pentraxin-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558366.1
SIO_010081: LOC125465160
subclass of: SO_0000673
so part of: LOC125465160
location: join(2606380..2606462,2606562..2606637,2610212..2611757)
location: region:2606380-2611757:1
so has part: feature:2606380-2606462:1:exon
so has part: feature:2606562-2606637:1:exon
so has part: feature:2610212-2611757:1:exon

position:2606380:1
position: 2606380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2606380-2606462:1:exon

position:2606462:1
position: 2606462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2606562-2606637:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2610212-2611757:1:exon

LOC125465160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465160
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mucosal pentraxin-like
translation: MKICFILVFVVCVYMPISEGAGLARKSLTFPNKTMNSYVQLNPMSCPNLFAFTLCLRAASEDSHSYGLFSYATSQNANELLLWKWSDTRLDLYLRDTVIPFSLPAMNALMRHICVSWESEHGEVTFWVNGQRSARKVGRRGKMVRGGGTFILGQEQDSVGGGFDIKQSFAGEITDVNLWDHVLTATEIKAVSESCNSLGGSIIDWSTISYSARGKVNIQDNKDCTT
SIO_010081: LOC125465160
subclass of: SO_0000673
so part of: LOC125465160
location: join(2606574..2606637,2610212..2610828)
location: region:2606574-2610828:1
so has part: feature:2606574-2606637:1:exon
so has part: feature:2610212-2610828:1:exon

XP_048414323.1
type: Protein
SIO_000068: ncbiprotein

position:2606574:1
position: 2606574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2610828:1
position: 2610828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2606574-2606637:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2610212-2610828:1:exon

LOC125465160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465160
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mucosal pentraxin-like
translation: MKICFILVFVVCVYMPISEGAGLARKSLTFPNKTMNSYVQLNPMSCPNLFAFTLCLRAASEDSHSYGLFSYATSQNANELLLWKWSDTRLDLYLRDTVIPFSLPAMNALMRHICVSWESEHGEVTFWVNGQRSARKVGRRGKMVRGGGTFILGQEQDSVGGGFDIKQSFAGEITDVNLWDHVLTATEIKAVSESCNSLGGSIIDWSTISYSARGKVNIQDNKDCTT
SIO_010081: LOC125465160
subclass of: SO_0000673
so part of: LOC125465160
location: join(2606574..2606637,2610212..2610828)
location: region:2606574-2610828:1
so has part: feature:2606574-2606637:1:exon
so has part: feature:2610212-2610828:1:exon

XP_048414324.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2606574-2606637:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2610212-2610828:1:exon

col16a1
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: col16a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2657316..2919530)
location: region:2657316-2919530:-1
so has part: feature:2657316-2919530:-1:exon
subclass of: SO_0000010

125464987
type: Gene
SIO_000068: ncbigene

position:2657316:-1
position: 2657316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2919530:-1
position: 2919530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2657316-2919530:-1:exon

col16a1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: col16a1
product: collagen, type XVI, alpha 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048557999.1
SIO_010081: col16a1
subclass of: SO_0000673
so part of: col16a1
location: complement(join(2657316..2659636,2663876..2663953,2665630..2665800,2666893..2666959,2669002..2669202,2673138..2673182,2676724..2676759,2678551..2678640,2679532..2679582,2681102..2681155,2689513..2689566,2696228..2696272,2696768..2696812,2696897..2696950,2701361..2701432,2701956..2702018,2704028..2704063,2707751..2707804,2710256..2710300,2712342..2712395,2714968..2715021,2718061..2718114,2721224..2721268,2723067..2723111,2726453..2726533,2727130..2727189,2735625..2735741,2738718..2738762,2741685..2741735,2743390..2743470,2743627..2743686,2744772..2744849,2746769..2746795,2748845..2748898,2751938..2752006,2752837..2752890,2755928..2755963,2758877..2758918,2759019..2759072,2761381..2761503,2761936..2762043,2769408..2769530,2771960..2772013,2773066..2773119,2778416..2778451,2786787..2786909,2790023..2790058,2790491..2790526,2808740..2808844,2810577..2810612,2813872..2813916,2816162..2816200,2817142..2817237,2819677..2819721,2822129..2822200,2824097..2824126,2827100..2827135,2828435..2828452,2841914..2841940,2854419..2854454,2856957..2856995,2864304..2864444,2867347..2867427,2869194..2869469,2870510..2870633,2917873..2917990,2918450..2918521,2919409..2919530))
location: region:2657316-2919530:-1
so has part: feature:2919409-2919530:-1:exon
so has part: feature:2918450-2918521:-1:exon
so has part: feature:2917873-2917990:-1:exon
so has part: feature:2870510-2870633:-1:exon
so has part: feature:2869194-2869469:-1:exon
so has part: feature:2867347-2867427:-1:exon
so has part: feature:2864304-2864444:-1:exon
so has part: feature:2856957-2856995:-1:exon
so has part: feature:2854419-2854454:-1:exon
so has part: feature:2841914-2841940:-1:exon
so has part: feature:2828435-2828452:-1:exon
so has part: feature:2827100-2827135:-1:exon
so has part: feature:2824097-2824126:-1:exon
so has part: feature:2822129-2822200:-1:exon
so has part: feature:2819677-2819721:-1:exon
so has part: feature:2817142-2817237:-1:exon
so has part: feature:2816162-2816200:-1:exon
so has part: feature:2813872-2813916:-1:exon
so has part: feature:2810577-2810612:-1:exon
so has part: feature:2808740-2808844:-1:exon
so has part: feature:2790491-2790526:-1:exon
so has part: feature:2790023-2790058:-1:exon
so has part: feature:2786787-2786909:-1:exon
so has part: feature:2778416-2778451:-1:exon
so has part: feature:2773066-2773119:-1:exon
so has part: feature:2771960-2772013:-1:exon
so has part: feature:2769408-2769530:-1:exon
so has part: feature:2761936-2762043:-1:exon
so has part: feature:2761381-2761503:-1:exon
so has part: feature:2759019-2759072:-1:exon
so has part: feature:2758877-2758918:-1:exon
so has part: feature:2755928-2755963:-1:exon
so has part: feature:2752837-2752890:-1:exon
so has part: feature:2751938-2752006:-1:exon
so has part: feature:2748845-2748898:-1:exon
so has part: feature:2746769-2746795:-1:exon
so has part: feature:2744772-2744849:-1:exon
so has part: feature:2743627-2743686:-1:exon
so has part: feature:2743390-2743470:-1:exon
so has part: feature:2741685-2741735:-1:exon
so has part: feature:2738718-2738762:-1:exon
so has part: feature:2735625-2735741:-1:exon
so has part: feature:2727130-2727189:-1:exon
so has part: feature:2726453-2726533:-1:exon
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col16a1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: col16a1
product: collagen, type XVI, alpha 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048557998.1
SIO_010081: col16a1
subclass of: SO_0000673
so part of: col16a1
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type: ReverseStrandPosition
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col16a1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: col16a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(XVI) chain isoform X2
translation: MRTIWITILWVFTSVQTVPGGAARKHRDIQCPRVHGDGWKLQNQQHYVNISGFNLLRRFSLFKTPAVKKVRSPTGALIVKLGSLSLIRPTELVFPQGLPQDFTFLATMLLKKKKVKENWYMIKITDQQGLTQFSIRIDGRDKAVEYKAKGHFQDYVRWVFSSEGVAALFDLRWHKLVISVQANVASLYIDCRLIEIKSVEQRADIDTEGQTVMSRIAEDNKPAEVDLQQMILFCDPLMAEKLTCCEIPGIKCATESIVQKSRRNAEVKTMKSLSVPLPQMSGKVHTKCFCVDEDTKSKVGKTGQEGENDEECKPCLQREPGQNEASGIAKQKHEGCIVCPQGQKGEKEELGSLEGTMGPRPMKSEKGQKGEPGIKGSVGLPGRDGKPGELCVPGPKGAKGDPGPVGPEGLAGEPGSPGPPGPPGIGIPGKPGKPGGPSGPKGEAGSDGVPGPEGIPGKPGKPGLPGPKGEKGDQCGVCPTHLEAHGDTKFTGGHSQGAETGVPGKLGVPGPPGTPGEKGDTGDPGLKGEKGDSCKICPQLTDELRNIVGIPGPPGAKGDTGPPGVQEPGPPGNIGKPGATGKTGKQGNQGIPGNEGEKGNKGDQGDRGITGAPGPKGEKGDGCGLCPSAQAAHLKISAPDDGNGSQSEKQPAHLIQPGIKGDRGPKGDRGEPGEKGIPGIPGIPGALGRHGLKGQKGDQCDVCPTIPDDFKDVIGLPGKPGPPGDPGPPGTGEPGIHGEPGLQGLTGSPGMKGEKGQAGTPGRGLPGVPGKDGVIGKPGNPGAAGIPGLPGAVGPKGNKGQAGEHGIPGHPGAPGVGLPGTRGKQGETGDTGLPGRRGLPGVPGTKGEKGAAAEQCICMNGQPIPEGDGRYPGDSGEHGHPGAPGDRMLWSLGPLGPPGPPGPPGLPGPPGLPGLPGGNGRQGIPGNDGMPGAPGLPGMSPLSLFAERNDSFFKTFCGNCSSGFPGAQAFTGMKVEQIEHGTPGAAGVDHCEKCKQQRQQQNQEELPRMEEQLPNNRECGYPGLPGMPGPPGERGVKGEQGSIGQRGYAGPPGPPGPPGFPGSPGTTGLPGLQGERGLPGVAGQKGEQGPIGPSGYPGSSGMPGLPGLKGDRGYAGPPGEKGESGPPGIPGPRGPAGPVGPKGGSGLPGSRGDKGDQGFQGQPGFPGQPGPIGFPGKSGPPGPPGPPGEKGNDGSVGPVGPTGPPGRSGPPGLQGPPGVEGLDGKEGKPGPRGETGPPGPPGLRGLHGFKGKPGLPGQPGQRGEPGVTGPPGNVGRPGFEGEPGPPGPVGPPGVPGHVGAAGIPGASGPTGPPGVGTKGDRGPSGERGLPGLVGPPGVPGAPGLMGEPGQDGAAGKEGSPGIPGVAGPPGPKGEPGNPGEKGAQGDRGPPGIYGGYSGKSSGMAMPGPPGSPGERGSPGPPGPTGPPGIPGAPGTPGTMTETVNFDEIKRLIRQEVTKIFDERMAYYLARIRTPDSTSPGRPGPPGKIGPTGHPGQPGQSGLPGQPGRDGRPGLPGPKGPSGPKGERGENGIGRPGEPGAPGPPGPAGPPGYSKTGPPGPTGQQGVPGMPGPPGLQGASGKNGRCTPSDCIMRVPEPYNAKNSKGPSHWMN
SIO_010081: col16a1
subclass of: SO_0000673
so part of: col16a1
location: complement(join(2659434..2659636,2663876..2663953,2665630..2665800,2666893..2666959,2669002..2669202,2673138..2673182,2676724..2676759,2678551..2678640,2679532..2679582,2681102..2681155,2689513..2689566,2696228..2696272,2696768..2696812,2696897..2696950,2701361..2701432,2701956..2702018,2704028..2704063,2707751..2707804,2710256..2710300,2712342..2712395,2714968..2715021,2718061..2718114,2721224..2721268,2723067..2723111,2726453..2726533,2727130..2727189,2735625..2735741,2738718..2738762,2741685..2741735,2743390..2743470,2743627..2743686,2744772..2744849,2746769..2746795,2748845..2748898,2751938..2752006,2752837..2752890,2755928..2755963,2758877..2758918,2759019..2759072,2761381..2761503,2761936..2762043,2769408..2769530,2771960..2772013,2773066..2773119,2778416..2778451,2786787..2786909,2790023..2790058,2790491..2790526,2808740..2808844,2810577..2810612,2813872..2813916,2816162..2816200,2817142..2817237,2819677..2819721,2822129..2822200,2824097..2824126,2827100..2827135,2828435..2828452,2841914..2841940,2854419..2854454,2856957..2856995,2864304..2864444,2867347..2867427,2869194..2869469,2870510..2870633,2917873..2917990,2918450..2918521,2919409..2919490))
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XP_048413956.1
type: Protein
SIO_000068: ncbiprotein

position:2659434:-1
position: 2659434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2919490:-1
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type: ReverseStrandPosition
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urn:…
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SIO_000628: feature:2810577-2810612:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2808740-2808844:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2790491-2790526:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2790023-2790058:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2786787-2786909:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2778416-2778451:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2773066-2773119:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2771960-2772013:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2769408-2769530:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2761936-2762043:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2761381-2761503:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2759019-2759072:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2758877-2758918:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2755928-2755963:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2752837-2752890:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2751938-2752006:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2748845-2748898:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2746769-2746795:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2744772-2744849:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2743627-2743686:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2743390-2743470:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2741685-2741735:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2738718-2738762:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2735625-2735741:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2727130-2727189:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2726453-2726533:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2723067-2723111:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:2721224-2721268:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:2718061-2718114:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:2714968-2715021:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:2712342-2712395:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:2710256-2710300:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:2707751-2707804:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:2704028-2704063:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:2701956-2702018:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:2701361-2701432:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:2696897-2696950:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:2696768-2696812:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:2696228-2696272:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:2689513-2689566:-1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:2681102-2681155:-1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:2679532-2679582:-1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:2678551-2678640:-1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:2676724-2676759:-1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:2673138-2673182:-1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:2669002-2669202:-1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:2666893-2666959:-1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:2665630-2665800:-1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:2663876-2663953:-1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:2659434-2659636:-1:exon

col16a1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: col16a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(XVI) chain isoform X1
translation: MRTIWITILWVFTSVQTVPGGAARKHRDIQCPRVHGDGWKLQNQQHYVNISGFNLLRRFSLFKTPAVKKVRSPTGALIVKLGSLSLIRPTELVFPQGLPQDFTFLATMLLKKKKVKENWYMIKITDQQGLTQFSIRIDGRDKAVEYKAKGHFQDYVRWVFSSEGVAALFDLRWHKLVISVQANVASLYIDCRLIEIKSVEQRADIDTEGQTVMSRIAEDNKPAEVDLQQMILFCDPLMAEKLTCCEIPGIKCATESIVQKSRRNAEVKTMKSLSVPLPQMSGKVHTKCFCVDEDTKSKVGKTGQEGENDEECKPCLQREPGQNEASGIAKQKHEGCIVCPQGQKGEKEELGSLEGTMGPRPMKSEKGQKGEPGIKGSVGLPGRDGKPGELCVPGPKGAKGDPGPVGPEGLAGEPGSPGPPGPPGIGIPGKPGKPGGPSGPKGEAGSDGVPGPEGIPGKPGKPGLPGPKGEKGDQCGVCPTHLEAHGDTKFTGGHSQGAETGVPGKLGVPGPPGTPGEKGDTGDPGLKGEKGDSCKICPQLTDELRNIVGIPGPPGAKGDTGPPGVQEPGPPGQPGAPGPHGFKGEKGNIGKPGATGKTGKQGNQGIPGNEGEKGNKGDQGDRGITGAPGPKGEKGDGCGLCPSAQAAHLKISAPDDGNGSQSEKQPAHLIQPGIKGDRGPKGDRGEPGEKGIPGIPGIPGALGRHGLKGQKGDQCDVCPTIPDDFKDVIGLPGKPGPPGDPGPPGTGEPGIHGEPGLQGLTGSPGMKGEKGQAGTPGRGLPGVPGKDGVIGKPGNPGAAGIPGLPGAVGPKGNKGQAGEHGIPGHPGAPGVGLPGTRGKQGETGDTGLPGRRGLPGVPGTKGEKGAAAEQCICMNGQPIPEGDGRYPGDSGEHGHPGAPGDRMLWSLGPLGPPGPPGPPGLPGPPGLPGLPGGNGRQGIPGNDGMPGAPGLPGMSPLSLFAERNDSFFKTFCGNCSSGFPGAQAFTGMKVEQIEHGTPGAAGVDHCEKCKQQRQQQNQEELPRMEEQLPNNRECGYPGLPGMPGPPGERGVKGEQGSIGQRGYAGPPGPPGPPGFPGSPGTTGLPGLQGERGLPGVAGQKGEQGPIGPSGYPGSSGMPGLPGLKGDRGYAGPPGEKGESGPPGIPGPRGPAGPVGPKGGSGLPGSRGDKGDQGFQGQPGFPGQPGPIGFPGKSGPPGPPGPPGEKGNDGSVGPVGPTGPPGRSGPPGLQGPPGVEGLDGKEGKPGPRGETGPPGPPGLRGLHGFKGKPGLPGQPGQRGEPGVTGPPGNVGRPGFEGEPGPPGPVGPPGVPGHVGAAGIPGASGPTGPPGVGTKGDRGPSGERGLPGLVGPPGVPGAPGLMGEPGQDGAAGKEGSPGIPGVAGPPGPKGEPGNPGEKGAQGDRGPPGIYGGYSGKSSGMAMPGPPGSPGERGSPGPPGPTGPPGIPGAPGTPGTMTETVNFDEIKRLIRQEVTKIFDERMAYYLARIRTPDSTSPGRPGPPGKIGPTGHPGQPGQSGLPGQPGRDGRPGLPGPKGPSGPKGERGENGIGRPGEPGAPGPPGPAGPPGYSKTGPPGPTGQQGVPGMPGPPGLQGASGKNGRCTPSDCIMRVPEPYNAKNSKGPSHWMN
SIO_010081: col16a1
subclass of: SO_0000673
so part of: col16a1
location: complement(join(2659434..2659636,2663876..2663953,2665630..2665800,2666893..2666959,2669002..2669202,2673138..2673182,2676724..2676759,2678551..2678640,2679532..2679582,2681102..2681155,2689513..2689566,2696228..2696272,2696768..2696812,2696897..2696950,2701361..2701432,2701956..2702018,2704028..2704063,2707751..2707804,2710256..2710300,2712342..2712395,2714968..2715021,2718061..2718114,2721224..2721268,2723067..2723111,2726453..2726533,2727130..2727189,2735625..2735741,2738718..2738762,2741685..2741735,2743390..2743470,2743627..2743686,2744772..2744849,2746769..2746795,2748845..2748898,2751938..2752006,2752837..2752890,2755928..2755963,2758877..2758918,2759019..2759072,2761381..2761503,2761936..2762043,2769408..2769530,2771960..2772013,2773066..2773119,2778416..2778451,2782919..2782963,2786787..2786909,2790023..2790058,2790491..2790526,2808740..2808844,2810577..2810612,2813872..2813916,2816162..2816200,2817142..2817237,2819677..2819721,2822129..2822200,2824097..2824126,2827100..2827135,2828435..2828452,2841914..2841940,2854419..2854454,2856957..2856995,2864304..2864444,2867347..2867427,2869194..2869469,2870510..2870633,2917873..2917990,2918450..2918521,2919409..2919490))
location: region:2659434-2919490:-1
so has part: feature:2919409-2919490:-1:exon
so has part: feature:2918450-2918521:-1:exon
so has part: feature:2917873-2917990:-1:exon
so has part: feature:2870510-2870633:-1:exon
so has part: feature:2869194-2869469:-1:exon
so has part: feature:2867347-2867427:-1:exon
so has part: feature:2864304-2864444:-1:exon
so has part: feature:2856957-2856995:-1:exon
so has part: feature:2854419-2854454:-1:exon
so has part: feature:2841914-2841940:-1:exon
so has part: feature:2828435-2828452:-1:exon
so has part: feature:2827100-2827135:-1:exon
so has part: feature:2824097-2824126:-1:exon
so has part: feature:2822129-2822200:-1:exon
so has part: feature:2819677-2819721:-1:exon
so has part: feature:2817142-2817237:-1:exon
so has part: feature:2816162-2816200:-1:exon
so has part: feature:2813872-2813916:-1:exon
so has part: feature:2810577-2810612:-1:exon
so has part: feature:2808740-2808844:-1:exon
so has part: feature:2790491-2790526:-1:exon
so has part: feature:2790023-2790058:-1:exon
so has part: feature:2786787-2786909:-1:exon
so has part: feature:2782919-2782963:-1:exon
so has part: feature:2778416-2778451:-1:exon
so has part: feature:2773066-2773119:-1:exon
so has part: feature:2771960-2772013:-1:exon
so has part: feature:2769408-2769530:-1:exon
so has part: feature:2761936-2762043:-1:exon
so has part: feature:2761381-2761503:-1:exon
so has part: feature:2759019-2759072:-1:exon
so has part: feature:2758877-2758918:-1:exon
so has part: feature:2755928-2755963:-1:exon
so has part: feature:2752837-2752890:-1:exon
so has part: feature:2751938-2752006:-1:exon
so has part: feature:2748845-2748898:-1:exon
so has part: feature:2746769-2746795:-1:exon
so has part: feature:2744772-2744849:-1:exon
so has part: feature:2743627-2743686:-1:exon
so has part: feature:2743390-2743470:-1:exon
so has part: feature:2741685-2741735:-1:exon
so has part: feature:2738718-2738762:-1:exon
so has part: feature:2735625-2735741:-1:exon
so has part: feature:2727130-2727189:-1:exon
so has part: feature:2726453-2726533:-1:exon
so has part: feature:2723067-2723111:-1:exon
so has part: feature:2721224-2721268:-1:exon
so has part: feature:2718061-2718114:-1:exon
so has part: feature:2714968-2715021:-1:exon
so has part: feature:2712342-2712395:-1:exon
so has part: feature:2710256-2710300:-1:exon
so has part: feature:2707751-2707804:-1:exon
so has part: feature:2704028-2704063:-1:exon
so has part: feature:2701956-2702018:-1:exon
so has part: feature:2701361-2701432:-1:exon
so has part: feature:2696897-2696950:-1:exon
so has part: feature:2696768-2696812:-1:exon
so has part: feature:2696228-2696272:-1:exon
so has part: feature:2689513-2689566:-1:exon
so has part: feature:2681102-2681155:-1:exon
so has part: feature:2679532-2679582:-1:exon
so has part: feature:2678551-2678640:-1:exon
so has part: feature:2676724-2676759:-1:exon
so has part: feature:2673138-2673182:-1:exon
so has part: feature:2669002-2669202:-1:exon
so has part: feature:2666893-2666959:-1:exon

XP_048413955.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2919409-2919490:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2918450-2918521:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2917873-2917990:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2870510-2870633:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2869194-2869469:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2867347-2867427:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2864304-2864444:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2856957-2856995:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2854419-2854454:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2841914-2841940:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2828435-2828452:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2827100-2827135:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2824097-2824126:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2822129-2822200:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2819677-2819721:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2817142-2817237:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2816162-2816200:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2813872-2813916:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2810577-2810612:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2808740-2808844:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2790491-2790526:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2790023-2790058:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2786787-2786909:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2782919-2782963:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2778416-2778451:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2773066-2773119:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2771960-2772013:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2769408-2769530:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2761936-2762043:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2761381-2761503:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2759019-2759072:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2758877-2758918:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2755928-2755963:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2752837-2752890:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2751938-2752006:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2748845-2748898:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2746769-2746795:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2744772-2744849:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2743627-2743686:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2743390-2743470:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2741685-2741735:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2738718-2738762:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2735625-2735741:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2727130-2727189:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2726453-2726533:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:2723067-2723111:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:2721224-2721268:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:2718061-2718114:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:2714968-2715021:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:2712342-2712395:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:2710256-2710300:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:2707751-2707804:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:2704028-2704063:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:2701956-2702018:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:2701361-2701432:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:2696897-2696950:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:2696768-2696812:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:2696228-2696272:-1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:2689513-2689566:-1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:2681102-2681155:-1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:2679532-2679582:-1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:2678551-2678640:-1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:2676724-2676759:-1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:2673138-2673182:-1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:2669002-2669202:-1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:2666893-2666959:-1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:2665630-2665800:-1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:2663876-2663953:-1:exon

urn:…
SIO_000300: 69
SIO_000628: feature:2659434-2659636:-1:exon

LOC125464872
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125464872
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2958052..2963866
location: region:2958052-2963866:1
so has part: feature:2958052-2963866:1:exon

125464872
type: Gene
SIO_000068: ncbigene

position:2958052:1
position: 2958052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2963866:1
position: 2963866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2958052-2963866:1:exon

LOC125464872
type: Exon
subclass of: SO_0000147
RO_0002162: 378071
gene: LOC125464872
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 28% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125464872
subclass of: SO_0000673
so part of: LOC125464872
location: 2958052..2958061
location: region:2958052-2958061:1
so has part: feature:2958052-2958061:1:exon

position:2958061:1
position: 2958061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2958052-2958061:1:exon

LOC125464872
type: Exon
subclass of: SO_0000147
RO_0002162: 378071
gene: LOC125464872
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 28% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC125464872
subclass of: SO_0000673
so part of: LOC125464872
location: 2963398..2963866
location: region:2963398-2963866:1
so has part: feature:2963398-2963866:1:exon

position:2963398:1
position: 2963398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2963398-2963866:1:exon

adgrb2
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: adgrb2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3240435..3924579)
location: region:3240435-3924579:-1
so has part: feature:3240435-3924579:-1:exon
subclass of: SO_0000010

125465044
type: Gene
SIO_000068: ncbigene

position:3240435:-1
position: 3240435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3924579:-1
position: 3924579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3240435-3924579:-1:exon

adgrb2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: adgrb2
product: adhesion G protein-coupled receptor B2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_048558109.1
SIO_010081: adgrb2
subclass of: SO_0000673
so part of: adgrb2
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location: region:3240435-3924579:-1
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urn:…
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urn:…
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SIO_000300: 3
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urn:…
SIO_000300: 4
SIO_000628: feature:3732666-3732830:-1:exon

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SIO_000300: 5
SIO_000628: feature:3667708-3667869:-1:exon

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SIO_000628: feature:3619960-3620124:-1:exon

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urn:…
SIO_000300: 7
SIO_000628: feature:3611153-3611254:-1:exon

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SIO_000300: 8
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urn:…
SIO_000300: 10
SIO_000628: feature:3531577-3531645:-1:exon

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SIO_000300: 11
SIO_000628: feature:3525632-3525740:-1:exon

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urn:…
SIO_000300: 12
SIO_000628: feature:3514423-3514569:-1:exon

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SIO_000300: 13
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SIO_000300: 14
SIO_000628: feature:3469946-3470045:-1:exon

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urn:…
SIO_000300: 15
SIO_000628: feature:3464575-3464618:-1:exon

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SIO_000300: 16
SIO_000628: feature:3418559-3418685:-1:exon

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SIO_000300: 17
SIO_000628: feature:3371122-3371225:-1:exon

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urn:…
SIO_000300: 18
SIO_000628: feature:3361952-3362054:-1:exon

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urn:…
SIO_000300: 19
SIO_000628: feature:3354050-3354200:-1:exon

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SIO_000300: 20
SIO_000628: feature:3345865-3345934:-1:exon

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SIO_000300: 21
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SIO_000300: 22
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SIO_000300: 26
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SIO_000300: 27
SIO_000628: feature:3283397-3284061:-1:exon

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SIO_000300: 28
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urn:…
SIO_000300: 29
SIO_000628: feature:3256181-3256285:-1:exon

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urn:…
SIO_000300: 30
SIO_000628: feature:3254451-3254504:-1:exon

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SIO_000300: 31
SIO_000628: feature:3240435-3244487:-1:exon

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reference: sequence
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adgrb2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: adgrb2
product: adhesion G protein-coupled receptor B2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_048558107.1
SIO_010081: adgrb2
subclass of: SO_0000673
so part of: adgrb2
location: complement(join(3240435..3244487,3254451..3254504,3256181..3256285,3271700..3271735,3283397..3284061,3286582..3286621,3288779..3288874,3309109..3309280,3330508..3330593,3331416..3331482,3345865..3345934,3354050..3354200,3361952..3362054,3371122..3371225,3418559..3418685,3464575..3464618,3469946..3470045,3490520..3490595,3514423..3514569,3525632..3525740,3531577..3531645,3539447..3539641,3585500..3585606,3611153..3611254,3619960..3620124,3667708..3667869,3691157..3691321,3732666..3732830,3750545..3750628,3899145..3899877,3924261..3924579))
location: region:3240435-3924579:-1
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so has part: feature:3256181-3256285:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:3924261-3924579:-1:exon

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urn:…
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SIO_000628: feature:3240435-3244487:-1:exon

adgrb2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: adgrb2
product: adhesion G protein-coupled receptor B2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048558106.1
SIO_010081: adgrb2
subclass of: SO_0000673
so part of: adgrb2
location: complement(join(3240435..3244487,3256181..3256285,3271700..3271735,3283397..3284061,3286582..3286621,3288779..3288874,3309109..3309280,3322595..3322693,3330508..3330593,3331416..3331482,3345865..3345934,3354050..3354200,3361952..3362054,3371122..3371225,3418559..3418685,3464575..3464618,3469946..3470045,3490520..3490595,3514423..3514569,3525632..3525740,3531577..3531645,3539447..3539641,3585500..3585606,3611153..3611254,3619960..3620124,3667708..3667869,3691157..3691321,3732666..3732830,3750545..3750628,3899145..3899877,3924261..3924579))
location: region:3240435-3924579:-1
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urn:…
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adgrb2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: adgrb2
product: adhesion G protein-coupled receptor B2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048558103.1
SIO_010081: adgrb2
subclass of: SO_0000673
so part of: adgrb2
location: complement(join(3240435..3244487,3254451..3254504,3256181..3256285,3271700..3271735,3283397..3284061,3286582..3286621,3288779..3288874,3309109..3309280,3322595..3322693,3330508..3330593,3331416..3331482,3345865..3345934,3354050..3354200,3361952..3362054,3371122..3371225,3418559..3418685,3464575..3464618,3469946..3470045,3490520..3490595,3514423..3514569,3525632..3525740,3531577..3531645,3539447..3539641,3585500..3585606,3611153..3611254,3619960..3620124,3667708..3667869,3691157..3691321,3732666..3732830,3750545..3750628,3899145..3899877,3924261..3924579))
location: region:3240435-3924579:-1
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adgrb2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: adgrb2
product: adhesion G protein-coupled receptor B2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048558104.1
SIO_010081: adgrb2
subclass of: SO_0000673
so part of: adgrb2
location: complement(join(3240435..3244487,3254451..3254504,3256181..3256285,3271700..3271735,3283397..3284061,3286582..3286621,3288779..3288874,3309109..3309280,3322595..3322693,3330508..3330593,3331416..3331482,3345865..3345934,3354050..3354200,3361952..3362054,3371122..3371225,3418559..3418685,3464575..3464618,3469946..3470045,3490520..3490595,3514423..3514569,3525632..3525740,3531577..3531645,3539447..3539641,3585500..3585606,3611153..3611254,3619960..3620124,3667708..3667869,3691157..3691321,3732666..3732830,3750545..3750628,3899145..3899877,3901225..3901279,3924261..3924579))
location: region:3240435-3924579:-1
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position:3901225:-1
position: 3901225
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type: ReverseStrandPosition
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position:3901279:-1
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adgrb2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: adgrb2
product: adhesion G protein-coupled receptor B2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048558105.1
SIO_010081: adgrb2
subclass of: SO_0000673
so part of: adgrb2
location: complement(join(3240435..3244487,3254451..3254504,3256181..3256285,3271700..3271735,3283397..3284061,3286582..3286621,3288779..3288874,3309109..3309280,3322595..3322693,3330508..3330593,3331416..3331482,3345865..3345934,3354050..3354200,3361952..3362054,3371122..3371225,3418559..3418685,3464575..3464618,3469946..3470045,3490520..3490595,3514423..3514569,3525632..3525740,3531577..3531645,3539447..3539641,3585500..3585606,3611153..3611254,3619960..3620124,3667708..3667869,3691157..3691321,3732666..3732830,3750545..3750628,3899145..3899877,3901225..3901279,3922853..3923247))
location: region:3240435-3923247:-1
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position:3923247:-1
position: 3923247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
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position:3922853:-1
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adgrb2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: adgrb2
product: adhesion G protein-coupled receptor B2, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048558110.1
SIO_010081: adgrb2
subclass of: SO_0000673
so part of: adgrb2
location: complement(join(3240435..3244487,3254451..3254504,3256181..3256285,3271700..3271735,3283397..3284061,3286582..3286621,3288779..3288874,3309109..3309280,3322595..3322693,3330508..3330593,3331416..3331482,3345865..3345934,3354050..3354200,3361952..3362054,3371122..3371225,3418559..3418685,3464575..3464618,3469946..3470045,3490520..3490595,3514423..3514569,3525632..3525740,3531577..3531645,3539447..3539641,3585500..3585606,3611153..3611254,3619960..3620124,3667708..3667869,3691157..3691321,3732666..3732830,3750545..3750628,3840206..3840308,3899145..3899289))
location: region:3240435-3899289:-1
so has part: feature:3899145-3899289:-1:exon
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so has part: feature:3525632-3525740:-1:exon
so has part: feature:3514423-3514569:-1:exon
so has part: feature:3490520-3490595:-1:exon
so has part: feature:3469946-3470045:-1:exon
so has part: feature:3464575-3464618:-1:exon
so has part: feature:3418559-3418685:-1:exon
so has part: feature:3371122-3371225:-1:exon
so has part: feature:3361952-3362054:-1:exon
so has part: feature:3354050-3354200:-1:exon
so has part: feature:3345865-3345934:-1:exon
so has part: feature:3331416-3331482:-1:exon
so has part: feature:3330508-3330593:-1:exon
so has part: feature:3322595-3322693:-1:exon
so has part: feature:3309109-3309280:-1:exon
so has part: feature:3288779-3288874:-1:exon
so has part: feature:3286582-3286621:-1:exon
so has part: feature:3283397-3284061:-1:exon
so has part: feature:3271700-3271735:-1:exon
so has part: feature:3256181-3256285:-1:exon
so has part: feature:3254451-3254504:-1:exon
so has part: feature:3240435-3244487:-1:exon

position:3899289:-1
position: 3899289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3899145-3899289:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3840206-3840308:-1:exon

position:3840206:-1
position: 3840206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3840308:-1
position: 3840308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3750545-3750628:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3732666-3732830:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3691157-3691321:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3667708-3667869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3619960-3620124:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3611153-3611254:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3585500-3585606:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3539447-3539641:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3531577-3531645:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3525632-3525740:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3514423-3514569:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3490520-3490595:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3469946-3470045:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3464575-3464618:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3418559-3418685:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3371122-3371225:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3361952-3362054:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3354050-3354200:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3345865-3345934:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3331416-3331482:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3330508-3330593:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3322595-3322693:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3309109-3309280:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3288779-3288874:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3286582-3286621:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3283397-3284061:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3271700-3271735:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:3256181-3256285:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:3254451-3254504:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:3240435-3244487:-1:exon

adgrb2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: adgrb2
product: adhesion G protein-coupled receptor B2, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048558112.1
SIO_010081: adgrb2
subclass of: SO_0000673
so part of: adgrb2
location: complement(join(3240435..3244487,3254451..3254504,3256181..3256285,3271700..3271735,3283397..3284061,3286582..3286621,3288779..3288874,3309109..3309280,3322595..3322693,3330508..3330593,3331416..3331482,3345865..3345934,3354050..3354200,3361952..3362054,3371122..3371225,3418559..3418685,3464575..3464618,3469946..3470045,3490520..3490595,3514423..3514569,3525632..3525740,3531577..3531645,3539447..3539641,3585500..3585606,3611153..3611254,3619960..3620124,3667708..3667869,3691157..3691321,3732666..3732830,3733794..3733841))
location: region:3240435-3733841:-1
so has part: feature:3733794-3733841:-1:exon
so has part: feature:3732666-3732830:-1:exon
so has part: feature:3691157-3691321:-1:exon
so has part: feature:3667708-3667869:-1:exon
so has part: feature:3619960-3620124:-1:exon
so has part: feature:3611153-3611254:-1:exon
so has part: feature:3585500-3585606:-1:exon
so has part: feature:3539447-3539641:-1:exon
so has part: feature:3531577-3531645:-1:exon
so has part: feature:3525632-3525740:-1:exon
so has part: feature:3514423-3514569:-1:exon
so has part: feature:3490520-3490595:-1:exon
so has part: feature:3469946-3470045:-1:exon
so has part: feature:3464575-3464618:-1:exon
so has part: feature:3418559-3418685:-1:exon
so has part: feature:3371122-3371225:-1:exon
so has part: feature:3361952-3362054:-1:exon
so has part: feature:3354050-3354200:-1:exon
so has part: feature:3345865-3345934:-1:exon
so has part: feature:3331416-3331482:-1:exon
so has part: feature:3330508-3330593:-1:exon
so has part: feature:3322595-3322693:-1:exon
so has part: feature:3309109-3309280:-1:exon
so has part: feature:3288779-3288874:-1:exon
so has part: feature:3286582-3286621:-1:exon
so has part: feature:3283397-3284061:-1:exon
so has part: feature:3271700-3271735:-1:exon
so has part: feature:3256181-3256285:-1:exon
so has part: feature:3254451-3254504:-1:exon
so has part: feature:3240435-3244487:-1:exon

position:3733841:-1
position: 3733841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3733794-3733841:-1:exon

position:3733794:-1
position: 3733794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3732666-3732830:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3691157-3691321:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3667708-3667869:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3619960-3620124:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3611153-3611254:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3585500-3585606:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3539447-3539641:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3531577-3531645:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3525632-3525740:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3514423-3514569:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3490520-3490595:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3469946-3470045:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3464575-3464618:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3418559-3418685:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3371122-3371225:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3361952-3362054:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3354050-3354200:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3345865-3345934:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3331416-3331482:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3330508-3330593:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3322595-3322693:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3309109-3309280:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3288779-3288874:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3286582-3286621:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3283397-3284061:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3271700-3271735:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3256181-3256285:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3254451-3254504:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:3240435-3244487:-1:exon

adgrb2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: adgrb2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adhesion G protein-coupled receptor B2 isoform X5
translation: MTTAHHLISSVLLSLALLTFGFEVSENICSTLVSGVLHRSFSLHDIFPETFSGCSWTIENPDPTKYSIYLKFHKVKQICSHTSLMVLQLDHYIPNQTCSTLDYIDYDAVNLCETRNLFTFLQFDKDFVQFCLTSESVLTEHLGKNAMEFQILEVILLNNENSSQFGCGILCHWFESCLSKRNHYESCGINYSGCPCPDMRENESDSSTVLPFVESEFIASKLHSRNVDDFNVEKGSAKAGSDIKKERKIRRQHPRSADDSGTFMAQIGDPAAEEWSQWSVCSLTCGMGSQVRTRSCVASPYGTLCSGPLRETRVCNNSATCPVEGQWLHWGPWNRCSVTCSNGTQQRTRKCISTHGWTECKGHKAEARDCFNQECSSDGKWGPWNHWSLCSKTCDSGWQRRLRMCKGTSVKGYPCEGSGEEVRTCNHKRCPAPHEMCRDDYIMAMTWKRTVAGELVYNKCPPNATGSASRRCLLNSHGIAFWGPPSFARCVSHDYRHLYVSIREHLAKGQRTLAGEGMIQVIRTMLGLIARKNFYSGDLLFSADILRNVTDTFKRASYIPASGDIQKFFQIVSYMLEADNRAKWEDALQVAPGSIYLMRVVEDFIHIVGHGLKVFQSALIVTDNLVTSIQREPVSAVSSDISFPMKGRRGMKDWAKNSEDKLYIPKEVFTRSSSETDDSTYYVIGAVLYRTLGLILPVTKKSMAINSKVLTVTVRPQPKASEPIVVELSHLINGTSDSHCVVWDDSKIDSGPGSWDPQGCETVQTQTSHTKCLCNQLATIAILAQKPRESTMELTGVPSVPLMIGCGIACMALLTLLAVYAAFWRFIKSERSIILLNFCLSIMASNILILVGQTQIHSKGVCMMTAAFLHFFFLSSFCWVLTEAWQSYLAVLGKIRTRLIRKRFLCLGWGLPALIVAISVGFTKAKGYGTANYCWLSLEGGLLYAFVGPAAIIVLVNMLIGIIVFNKLMSRDGISDKSKKQRAGQATEARSSLMLKCSKCGVVSTTALSATITSNAMASLWSSCVVLPLLALTWMSAVLAMTDRRSILFQILFAVFDSVQGFVIITVHCFLRREIQDVVKCRTGSCKTEENENSPDSYKNGQVQIMTDFEKDVDLACQSVLFKEVNTCNPATITGTLSRISLDDEEDEKLNTNSEGMNFTTLPGNIPPGNVLVQLPPMHQLHNMMSGMNELNEQPAKKETNNELRGTLYLCTENTLKPVDVKWRRAQEQPLEGDYMVLPRRTVSLKPFIKEDSKLNINVDDNRHIIGGNQPIESEVYPNFASLDQININLNQPYGTLNHPRNVPIKQHPSVRHILASELADRSRTMPRSKPSATNSTGSLERKRVRYSDLDFEKVMHTRKRHSELYHELNQKFYTLGRFRDSESSGFKQEKQCSISPAGAEKSTLAEQTVPLEQSWDNFTSPPANTLHLDSQENLELHSPHWETSATIALDTSEGDFQTEV
SIO_010081: adgrb2
subclass of: SO_0000673
so part of: adgrb2
location: complement(join(3244320..3244487,3254451..3254504,3256181..3256285,3271700..3271735,3283397..3284061,3286582..3286621,3288779..3288874,3309109..3309280,3322595..3322693,3330508..3330593,3331416..3331482,3345865..3345934,3354050..3354200,3361952..3362054,3371122..3371225,3418559..3418685,3464575..3464618,3469946..3470045,3490520..3490595,3514423..3514569,3525632..3525740,3531577..3531645,3539447..3539641,3585500..3585606,3611153..3611254,3619960..3620124,3667708..3667869,3732666..3732830,3750545..3750628,3899145..3899862))
location: region:3244320-3899862:-1
so has part: feature:3899145-3899862:-1:exon
so has part: feature:3750545-3750628:-1:exon
so has part: feature:3732666-3732830:-1:exon
so has part: feature:3667708-3667869:-1:exon
so has part: feature:3619960-3620124:-1:exon
so has part: feature:3611153-3611254:-1:exon
so has part: feature:3585500-3585606:-1:exon
so has part: feature:3539447-3539641:-1:exon
so has part: feature:3531577-3531645:-1:exon
so has part: feature:3525632-3525740:-1:exon
so has part: feature:3514423-3514569:-1:exon
so has part: feature:3490520-3490595:-1:exon
so has part: feature:3469946-3470045:-1:exon
so has part: feature:3464575-3464618:-1:exon
so has part: feature:3418559-3418685:-1:exon
so has part: feature:3371122-3371225:-1:exon
so has part: feature:3361952-3362054:-1:exon
so has part: feature:3354050-3354200:-1:exon
so has part: feature:3345865-3345934:-1:exon
so has part: feature:3331416-3331482:-1:exon
so has part: feature:3330508-3330593:-1:exon
so has part: feature:3322595-3322693:-1:exon
so has part: feature:3309109-3309280:-1:exon
so has part: feature:3288779-3288874:-1:exon
so has part: feature:3286582-3286621:-1:exon
so has part: feature:3283397-3284061:-1:exon
so has part: feature:3271700-3271735:-1:exon
so has part: feature:3256181-3256285:-1:exon
so has part: feature:3254451-3254504:-1:exon
so has part: feature:3244320-3244487:-1:exon

XP_048414066.1
type: Protein
SIO_000068: ncbiprotein

position:3244320:-1
position: 3244320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3899862:-1
position: 3899862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3899145-3899862:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3750545-3750628:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3732666-3732830:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3667708-3667869:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3619960-3620124:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3611153-3611254:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3585500-3585606:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3539447-3539641:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3531577-3531645:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3525632-3525740:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3514423-3514569:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3490520-3490595:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3469946-3470045:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3464575-3464618:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3418559-3418685:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3371122-3371225:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3361952-3362054:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3354050-3354200:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3345865-3345934:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3331416-3331482:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3330508-3330593:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3322595-3322693:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3309109-3309280:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3288779-3288874:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3286582-3286621:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3283397-3284061:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3271700-3271735:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3256181-3256285:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3254451-3254504:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:3244320-3244487:-1:exon

adgrb2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: adgrb2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adhesion G protein-coupled receptor B2 isoform X3
translation: MTTAHHLISSVLLSLALLTFGFEVSENICSTLVSGVLHRSFSLHDIFPETFSGCSWTIENPDPTKYSIYLKFHKVKQICSHTSLMVLQLDHYIPNQTCSTLDYIDYDAVNLCETRNLFTFLQFDKDFVQFCLTSESVLTEHLGKNAMEFQILEVILLNNENSSQFGCGILCHWFESCLSKRNHYESCGINYSGCPCPDMRENESDSSTVLPFVESEFIASKLHSRNVDDFNVEKGSAKAGSDIKKERKIRRQHPRSADDSGTFMAQIGDPAAEEWSQWSVCSLTCGMGSQVRTRSCVASPYGTLCSGPLRETRVCNNSATCPVHGLWEEWSPWSLCSVTCGRGSRTRSRMCVAPQHGGKACQGPELQTKLCNIALCPVEGQWLHWGPWNRCSVTCSNGTQQRTRKCISTHGWTECKGHKAEARDCFNQECSSDGKWGPWNHWSLCSKTCDSGWQRRLRMCKGTSVKGYPCEGSGEEVRTCNHKRCPAPHEMCRDDYIMAMTWKRTVAGELVYNKCPPNATGSASRRCLLNSHGIAFWGPPSFARCVSHDYRHLYVSIREHLAKGQRTLAGEGMIQVIRTMLGLIARKNFYSGDLLFSADILRNVTDTFKRASYIPASGDIQKFFQIVSYMLEADNRAKWEDALQVAPGSIYLMRVVEDFIHIVGHGLKVFQSALIVTDNLVTSIQREPVSAVSSDISFPMKGRRGMKDWAKNSEDKLYIPKEVFTRSSSETDDSTYYVIGAVLYRTLGLILPVTKKSMAINSKVLTVTVRPQPKASEPIVVELSHLINGTSDSHCVVWDDSKIDSGPGSWDPQGCETVQTQTSHTKCLCNQLATIAILAQKPRESTMELTGVPSVPLMIGCGIACMALLTLLAVYAAFWRFIKSERSIILLNFCLSIMASNILILVGQTQIHSKGVCMMTAAFLHFFFLSSFCWVLTEAWQSYLAVLGKIRTRLIRKRFLCLGWGLPALIVAISVGFTKAKGYGTANYCWLSLEGGLLYAFVGPAAIIVLVNMLIGIIVFNKLMSRDGISDKSKKQRAGASLWSSCVVLPLLALTWMSAVLAMTDRRSILFQILFAVFDSVQGFVIITVHCFLRREIQDVVKCRTGSCKTEENENSPDSYKNGQVQIMTDFEKDVDLACQSVLFKEVNTCNPATITGTLSRISLDDEEDEKLNTNSEGMNFTTLPGNIPPGNVLVQLPPMHQLHNMMSGMNELNEQPAKKETNNELRGTLYLCTENTLKPVDVKWRRAQEQPLEGDYMVLPRRTVSLKPFIKEDSKLNINVDDNRHIIGGNQPIESEVYPNFASLDQININLNQPYGTLNHPRNVPIKQHPSVRHILASELADRSRTMPRSKPSATNSTGSLERKRVRYSDLDFEKVMHTRKRHSELYHELNQKFYTLGRFRDSESSGFKQEKQCSISPAGAEKSTLAEQTVPLEQSWDNFTSPPANTLHLDSQENLELHSPHWETSATIALDTSEGDFQTEV
SIO_010081: adgrb2
subclass of: SO_0000673
so part of: adgrb2
location: complement(join(3244320..3244487,3254451..3254504,3256181..3256285,3271700..3271735,3283397..3284061,3286582..3286621,3288779..3288874,3309109..3309280,3330508..3330593,3331416..3331482,3345865..3345934,3354050..3354200,3361952..3362054,3371122..3371225,3418559..3418685,3464575..3464618,3469946..3470045,3490520..3490595,3514423..3514569,3525632..3525740,3531577..3531645,3539447..3539641,3585500..3585606,3611153..3611254,3619960..3620124,3667708..3667869,3691157..3691321,3732666..3732830,3750545..3750628,3899145..3899862))
location: region:3244320-3899862:-1
so has part: feature:3899145-3899862:-1:exon
so has part: feature:3750545-3750628:-1:exon
so has part: feature:3732666-3732830:-1:exon
so has part: feature:3691157-3691321:-1:exon
so has part: feature:3667708-3667869:-1:exon
so has part: feature:3619960-3620124:-1:exon
so has part: feature:3611153-3611254:-1:exon
so has part: feature:3585500-3585606:-1:exon
so has part: feature:3539447-3539641:-1:exon
so has part: feature:3531577-3531645:-1:exon
so has part: feature:3525632-3525740:-1:exon
so has part: feature:3514423-3514569:-1:exon
so has part: feature:3490520-3490595:-1:exon
so has part: feature:3469946-3470045:-1:exon
so has part: feature:3464575-3464618:-1:exon
so has part: feature:3418559-3418685:-1:exon
so has part: feature:3371122-3371225:-1:exon
so has part: feature:3361952-3362054:-1:exon
so has part: feature:3354050-3354200:-1:exon
so has part: feature:3345865-3345934:-1:exon
so has part: feature:3331416-3331482:-1:exon
so has part: feature:3330508-3330593:-1:exon
so has part: feature:3309109-3309280:-1:exon
so has part: feature:3288779-3288874:-1:exon
so has part: feature:3286582-3286621:-1:exon
so has part: feature:3283397-3284061:-1:exon
so has part: feature:3271700-3271735:-1:exon
so has part: feature:3256181-3256285:-1:exon
so has part: feature:3254451-3254504:-1:exon
so has part: feature:3244320-3244487:-1:exon

XP_048414064.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3899145-3899862:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3750545-3750628:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3732666-3732830:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3691157-3691321:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3667708-3667869:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3619960-3620124:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3611153-3611254:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3585500-3585606:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3539447-3539641:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3531577-3531645:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3525632-3525740:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3514423-3514569:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3490520-3490595:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3469946-3470045:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3464575-3464618:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3418559-3418685:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3371122-3371225:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3361952-3362054:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3354050-3354200:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3345865-3345934:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3331416-3331482:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3330508-3330593:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3309109-3309280:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3288779-3288874:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3286582-3286621:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3283397-3284061:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3271700-3271735:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3256181-3256285:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3254451-3254504:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:3244320-3244487:-1:exon

adgrb2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: adgrb2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adhesion G protein-coupled receptor B2 isoform X2
translation: MTTAHHLISSVLLSLALLTFGFEVSENICSTLVSGVLHRSFSLHDIFPETFSGCSWTIENPDPTKYSIYLKFHKVKQICSHTSLMVLQLDHYIPNQTCSTLDYIDYDAVNLCETRNLFTFLQFDKDFVQFCLTSESVLTEHLGKNAMEFQILEVILLNNENSSQFGCGILCHWFESCLSKRNHYESCGINYSGCPCPDMRENESDSSTVLPFVESEFIASKLHSRNVDDFNVEKGSAKAGSDIKKERKIRRQHPRSADDSGTFMAQIGDPAAEEWSQWSVCSLTCGMGSQVRTRSCVASPYGTLCSGPLRETRVCNNSATCPVHGLWEEWSPWSLCSVTCGRGSRTRSRMCVAPQHGGKACQGPELQTKLCNIALCPVEGQWLHWGPWNRCSVTCSNGTQQRTRKCISTHGWTECKGHKAEARDCFNQECSSDGKWGPWNHWSLCSKTCDSGWQRRLRMCKGTSVKGYPCEGSGEEVRTCNHKRCPAPHEMCRDDYIMAMTWKRTVAGELVYNKCPPNATGSASRRCLLNSHGIAFWGPPSFARCVSHDYRHLYVSIREHLAKGQRTLAGEGMIQVIRTMLGLIARKNFYSGDLLFSADILRNVTDTFKRASYIPASGDIQKFFQIVSYMLEADNRAKWEDALQVAPGSIYLMRVVEDFIHIVGHGLKVFQSALIVTDNLVTSIQREPVSAVSSDISFPMKGRRGMKDWAKNSEDKLYIPKEVFTRSSSETDDSTYYVIGAVLYRTLGLILPVTKKSMAINSKVLTVTVRPQPKASEPIVVELSHLINGTSDSHCVVWDDSKIDSGPGSWDPQGCETVQTQTSHTKCLCNQLATIAILAQKPRESTMELTGVPSVPLMIGCGIACMALLTLLAVYAAFWRFIKSERSIILLNFCLSIMASNILILVGQTQIHSKGVCMMTAAFLHFFFLSSFCWVLTEAWQSYLAVLGKIRTRLIRKRFLCLGWGLPALIVAISVGFTKAKGYGTANYCWLSLEGGLLYAFVGPAAIIVLVNMLIGIIVFNKLMSRDGISDKSKKQRAGQATEARSSLMLKCSKCGVVSTTALSATITSNAMASLWSSCVVLPLLALTWMSAVLAMTDRRSILFQILFAVFDSVQGFVIITVHCFLRREIQDVVKCRTGSCKTEENENSPDSYKNGQVQIMTDFEKDVDLACQSVLFKEVNTCNPATITGTLSRISLDDEEDEKLNTNSEGMNFTTLPGNIPPGNVLVQLPPMHQLHNMMSGMNELNEQPAKKETNNELRGTLYLCTENTLKPVDVKWRRAQEQPLEGDYMVLPRRTVSLKPFIKEDSKLNINVDDNRHIIGGNQPIESEVYPNFASLDQININLNQPYGTLNHPRNVPIKQHPSVRHILASELADRSRTMPRSKPSATNSTGSLERKRVRYSDLDFEKVMHTRKRHSELYHELNQKFYTLGRFRDSESSGFKEQTVPLEQSWDNFTSPPANTLHLDSQENLELHSPHWETSATIALDTSEGDFQTEV
SIO_010081: adgrb2
subclass of: SO_0000673
so part of: adgrb2
location: complement(join(3244320..3244487,3256181..3256285,3271700..3271735,3283397..3284061,3286582..3286621,3288779..3288874,3309109..3309280,3322595..3322693,3330508..3330593,3331416..3331482,3345865..3345934,3354050..3354200,3361952..3362054,3371122..3371225,3418559..3418685,3464575..3464618,3469946..3470045,3490520..3490595,3514423..3514569,3525632..3525740,3531577..3531645,3539447..3539641,3585500..3585606,3611153..3611254,3619960..3620124,3667708..3667869,3691157..3691321,3732666..3732830,3750545..3750628,3899145..3899862))
location: region:3244320-3899862:-1
so has part: feature:3899145-3899862:-1:exon
so has part: feature:3750545-3750628:-1:exon
so has part: feature:3732666-3732830:-1:exon
so has part: feature:3691157-3691321:-1:exon
so has part: feature:3667708-3667869:-1:exon
so has part: feature:3619960-3620124:-1:exon
so has part: feature:3611153-3611254:-1:exon
so has part: feature:3585500-3585606:-1:exon
so has part: feature:3539447-3539641:-1:exon
so has part: feature:3531577-3531645:-1:exon
so has part: feature:3525632-3525740:-1:exon
so has part: feature:3514423-3514569:-1:exon
so has part: feature:3490520-3490595:-1:exon
so has part: feature:3469946-3470045:-1:exon
so has part: feature:3464575-3464618:-1:exon
so has part: feature:3418559-3418685:-1:exon
so has part: feature:3371122-3371225:-1:exon
so has part: feature:3361952-3362054:-1:exon
so has part: feature:3354050-3354200:-1:exon
so has part: feature:3345865-3345934:-1:exon
so has part: feature:3331416-3331482:-1:exon
so has part: feature:3330508-3330593:-1:exon
so has part: feature:3322595-3322693:-1:exon
so has part: feature:3309109-3309280:-1:exon
so has part: feature:3288779-3288874:-1:exon
so has part: feature:3286582-3286621:-1:exon
so has part: feature:3283397-3284061:-1:exon
so has part: feature:3271700-3271735:-1:exon
so has part: feature:3256181-3256285:-1:exon
so has part: feature:3244320-3244487:-1:exon

XP_048414063.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3899145-3899862:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3750545-3750628:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3732666-3732830:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3691157-3691321:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3667708-3667869:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3619960-3620124:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3611153-3611254:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3585500-3585606:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3539447-3539641:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3531577-3531645:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3525632-3525740:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3514423-3514569:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3490520-3490595:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3469946-3470045:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3464575-3464618:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3418559-3418685:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3371122-3371225:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3361952-3362054:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3354050-3354200:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3345865-3345934:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3331416-3331482:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3330508-3330593:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3322595-3322693:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3309109-3309280:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3288779-3288874:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3286582-3286621:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3283397-3284061:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3271700-3271735:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3256181-3256285:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:3244320-3244487:-1:exon

adgrb2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: adgrb2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adhesion G protein-coupled receptor B2 isoform X1
translation: MTTAHHLISSVLLSLALLTFGFEVSENICSTLVSGVLHRSFSLHDIFPETFSGCSWTIENPDPTKYSIYLKFHKVKQICSHTSLMVLQLDHYIPNQTCSTLDYIDYDAVNLCETRNLFTFLQFDKDFVQFCLTSESVLTEHLGKNAMEFQILEVILLNNENSSQFGCGILCHWFESCLSKRNHYESCGINYSGCPCPDMRENESDSSTVLPFVESEFIASKLHSRNVDDFNVEKGSAKAGSDIKKERKIRRQHPRSADDSGTFMAQIGDPAAEEWSQWSVCSLTCGMGSQVRTRSCVASPYGTLCSGPLRETRVCNNSATCPVHGLWEEWSPWSLCSVTCGRGSRTRSRMCVAPQHGGKACQGPELQTKLCNIALCPVEGQWLHWGPWNRCSVTCSNGTQQRTRKCISTHGWTECKGHKAEARDCFNQECSSDGKWGPWNHWSLCSKTCDSGWQRRLRMCKGTSVKGYPCEGSGEEVRTCNHKRCPAPHEMCRDDYIMAMTWKRTVAGELVYNKCPPNATGSASRRCLLNSHGIAFWGPPSFARCVSHDYRHLYVSIREHLAKGQRTLAGEGMIQVIRTMLGLIARKNFYSGDLLFSADILRNVTDTFKRASYIPASGDIQKFFQIVSYMLEADNRAKWEDALQVAPGSIYLMRVVEDFIHIVGHGLKVFQSALIVTDNLVTSIQREPVSAVSSDISFPMKGRRGMKDWAKNSEDKLYIPKEVFTRSSSETDDSTYYVIGAVLYRTLGLILPVTKKSMAINSKVLTVTVRPQPKASEPIVVELSHLINGTSDSHCVVWDDSKIDSGPGSWDPQGCETVQTQTSHTKCLCNQLATIAILAQKPRESTMELTGVPSVPLMIGCGIACMALLTLLAVYAAFWRFIKSERSIILLNFCLSIMASNILILVGQTQIHSKGVCMMTAAFLHFFFLSSFCWVLTEAWQSYLAVLGKIRTRLIRKRFLCLGWGLPALIVAISVGFTKAKGYGTANYCWLSLEGGLLYAFVGPAAIIVLVNMLIGIIVFNKLMSRDGISDKSKKQRAGQATEARSSLMLKCSKCGVVSTTALSATITSNAMASLWSSCVVLPLLALTWMSAVLAMTDRRSILFQILFAVFDSVQGFVIITVHCFLRREIQDVVKCRTGSCKTEENENSPDSYKNGQVQIMTDFEKDVDLACQSVLFKEVNTCNPATITGTLSRISLDDEEDEKLNTNSEGMNFTTLPGNIPPGNVLVQLPPMHQLHNMMSGMNELNEQPAKKETNNELRGTLYLCTENTLKPVDVKWRRAQEQPLEGDYMVLPRRTVSLKPFIKEDSKLNINVDDNRHIIGGNQPIESEVYPNFASLDQININLNQPYGTLNHPRNVPIKQHPSVRHILASELADRSRTMPRSKPSATNSTGSLERKRVRYSDLDFEKVMHTRKRHSELYHELNQKFYTLGRFRDSESSGFKQEKQCSISPAGAEKSTLAEQTVPLEQSWDNFTSPPANTLHLDSQENLELHSPHWETSATIALDTSEGDFQTEV
SIO_010081: adgrb2
subclass of: SO_0000673
so part of: adgrb2
location: complement(join(3244320..3244487,3254451..3254504,3256181..3256285,3271700..3271735,3283397..3284061,3286582..3286621,3288779..3288874,3309109..3309280,3322595..3322693,3330508..3330593,3331416..3331482,3345865..3345934,3354050..3354200,3361952..3362054,3371122..3371225,3418559..3418685,3464575..3464618,3469946..3470045,3490520..3490595,3514423..3514569,3525632..3525740,3531577..3531645,3539447..3539641,3585500..3585606,3611153..3611254,3619960..3620124,3667708..3667869,3691157..3691321,3732666..3732830,3750545..3750628,3899145..3899862))
location: region:3244320-3899862:-1
so has part: feature:3899145-3899862:-1:exon
so has part: feature:3750545-3750628:-1:exon
so has part: feature:3732666-3732830:-1:exon
so has part: feature:3691157-3691321:-1:exon
so has part: feature:3667708-3667869:-1:exon
so has part: feature:3619960-3620124:-1:exon
so has part: feature:3611153-3611254:-1:exon
so has part: feature:3585500-3585606:-1:exon
so has part: feature:3539447-3539641:-1:exon
so has part: feature:3531577-3531645:-1:exon
so has part: feature:3525632-3525740:-1:exon
so has part: feature:3514423-3514569:-1:exon
so has part: feature:3490520-3490595:-1:exon
so has part: feature:3469946-3470045:-1:exon
so has part: feature:3464575-3464618:-1:exon
so has part: feature:3418559-3418685:-1:exon
so has part: feature:3371122-3371225:-1:exon
so has part: feature:3361952-3362054:-1:exon
so has part: feature:3354050-3354200:-1:exon
so has part: feature:3345865-3345934:-1:exon
so has part: feature:3331416-3331482:-1:exon
so has part: feature:3330508-3330593:-1:exon
so has part: feature:3322595-3322693:-1:exon
so has part: feature:3309109-3309280:-1:exon
so has part: feature:3288779-3288874:-1:exon
so has part: feature:3286582-3286621:-1:exon
so has part: feature:3283397-3284061:-1:exon
so has part: feature:3271700-3271735:-1:exon
so has part: feature:3256181-3256285:-1:exon
so has part: feature:3254451-3254504:-1:exon
so has part: feature:3244320-3244487:-1:exon

XP_048414060.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3899145-3899862:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3750545-3750628:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3732666-3732830:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3691157-3691321:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3667708-3667869:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3619960-3620124:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3611153-3611254:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3585500-3585606:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3539447-3539641:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3531577-3531645:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3525632-3525740:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3514423-3514569:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3490520-3490595:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3469946-3470045:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3464575-3464618:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3418559-3418685:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3371122-3371225:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3361952-3362054:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3354050-3354200:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3345865-3345934:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3331416-3331482:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3330508-3330593:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3322595-3322693:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3309109-3309280:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3288779-3288874:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3286582-3286621:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3283397-3284061:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3271700-3271735:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3256181-3256285:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:3254451-3254504:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:3244320-3244487:-1:exon

adgrb2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: adgrb2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adhesion G protein-coupled receptor B2 isoform X1
translation: MTTAHHLISSVLLSLALLTFGFEVSENICSTLVSGVLHRSFSLHDIFPETFSGCSWTIENPDPTKYSIYLKFHKVKQICSHTSLMVLQLDHYIPNQTCSTLDYIDYDAVNLCETRNLFTFLQFDKDFVQFCLTSESVLTEHLGKNAMEFQILEVILLNNENSSQFGCGILCHWFESCLSKRNHYESCGINYSGCPCPDMRENESDSSTVLPFVESEFIASKLHSRNVDDFNVEKGSAKAGSDIKKERKIRRQHPRSADDSGTFMAQIGDPAAEEWSQWSVCSLTCGMGSQVRTRSCVASPYGTLCSGPLRETRVCNNSATCPVHGLWEEWSPWSLCSVTCGRGSRTRSRMCVAPQHGGKACQGPELQTKLCNIALCPVEGQWLHWGPWNRCSVTCSNGTQQRTRKCISTHGWTECKGHKAEARDCFNQECSSDGKWGPWNHWSLCSKTCDSGWQRRLRMCKGTSVKGYPCEGSGEEVRTCNHKRCPAPHEMCRDDYIMAMTWKRTVAGELVYNKCPPNATGSASRRCLLNSHGIAFWGPPSFARCVSHDYRHLYVSIREHLAKGQRTLAGEGMIQVIRTMLGLIARKNFYSGDLLFSADILRNVTDTFKRASYIPASGDIQKFFQIVSYMLEADNRAKWEDALQVAPGSIYLMRVVEDFIHIVGHGLKVFQSALIVTDNLVTSIQREPVSAVSSDISFPMKGRRGMKDWAKNSEDKLYIPKEVFTRSSSETDDSTYYVIGAVLYRTLGLILPVTKKSMAINSKVLTVTVRPQPKASEPIVVELSHLINGTSDSHCVVWDDSKIDSGPGSWDPQGCETVQTQTSHTKCLCNQLATIAILAQKPRESTMELTGVPSVPLMIGCGIACMALLTLLAVYAAFWRFIKSERSIILLNFCLSIMASNILILVGQTQIHSKGVCMMTAAFLHFFFLSSFCWVLTEAWQSYLAVLGKIRTRLIRKRFLCLGWGLPALIVAISVGFTKAKGYGTANYCWLSLEGGLLYAFVGPAAIIVLVNMLIGIIVFNKLMSRDGISDKSKKQRAGQATEARSSLMLKCSKCGVVSTTALSATITSNAMASLWSSCVVLPLLALTWMSAVLAMTDRRSILFQILFAVFDSVQGFVIITVHCFLRREIQDVVKCRTGSCKTEENENSPDSYKNGQVQIMTDFEKDVDLACQSVLFKEVNTCNPATITGTLSRISLDDEEDEKLNTNSEGMNFTTLPGNIPPGNVLVQLPPMHQLHNMMSGMNELNEQPAKKETNNELRGTLYLCTENTLKPVDVKWRRAQEQPLEGDYMVLPRRTVSLKPFIKEDSKLNINVDDNRHIIGGNQPIESEVYPNFASLDQININLNQPYGTLNHPRNVPIKQHPSVRHILASELADRSRTMPRSKPSATNSTGSLERKRVRYSDLDFEKVMHTRKRHSELYHELNQKFYTLGRFRDSESSGFKQEKQCSISPAGAEKSTLAEQTVPLEQSWDNFTSPPANTLHLDSQENLELHSPHWETSATIALDTSEGDFQTEV
SIO_010081: adgrb2
subclass of: SO_0000673
so part of: adgrb2
location: complement(join(3244320..3244487,3254451..3254504,3256181..3256285,3271700..3271735,3283397..3284061,3286582..3286621,3288779..3288874,3309109..3309280,3322595..3322693,3330508..3330593,3331416..3331482,3345865..3345934,3354050..3354200,3361952..3362054,3371122..3371225,3418559..3418685,3464575..3464618,3469946..3470045,3490520..3490595,3514423..3514569,3525632..3525740,3531577..3531645,3539447..3539641,3585500..3585606,3611153..3611254,3619960..3620124,3667708..3667869,3691157..3691321,3732666..3732830,3750545..3750628,3899145..3899862))
location: region:3244320-3899862:-1
so has part: feature:3899145-3899862:-1:exon
so has part: feature:3750545-3750628:-1:exon
so has part: feature:3732666-3732830:-1:exon
so has part: feature:3691157-3691321:-1:exon
so has part: feature:3667708-3667869:-1:exon
so has part: feature:3619960-3620124:-1:exon
so has part: feature:3611153-3611254:-1:exon
so has part: feature:3585500-3585606:-1:exon
so has part: feature:3539447-3539641:-1:exon
so has part: feature:3531577-3531645:-1:exon
so has part: feature:3525632-3525740:-1:exon
so has part: feature:3514423-3514569:-1:exon
so has part: feature:3490520-3490595:-1:exon
so has part: feature:3469946-3470045:-1:exon
so has part: feature:3464575-3464618:-1:exon
so has part: feature:3418559-3418685:-1:exon
so has part: feature:3371122-3371225:-1:exon
so has part: feature:3361952-3362054:-1:exon
so has part: feature:3354050-3354200:-1:exon
so has part: feature:3345865-3345934:-1:exon
so has part: feature:3331416-3331482:-1:exon
so has part: feature:3330508-3330593:-1:exon
so has part: feature:3322595-3322693:-1:exon
so has part: feature:3309109-3309280:-1:exon
so has part: feature:3288779-3288874:-1:exon
so has part: feature:3286582-3286621:-1:exon
so has part: feature:3283397-3284061:-1:exon
so has part: feature:3271700-3271735:-1:exon
so has part: feature:3256181-3256285:-1:exon
so has part: feature:3254451-3254504:-1:exon
so has part: feature:3244320-3244487:-1:exon

XP_048414061.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3899145-3899862:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3750545-3750628:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3732666-3732830:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3691157-3691321:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3667708-3667869:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3619960-3620124:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3611153-3611254:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3585500-3585606:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3539447-3539641:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3531577-3531645:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3525632-3525740:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3514423-3514569:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3490520-3490595:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3469946-3470045:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3464575-3464618:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3418559-3418685:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3371122-3371225:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3361952-3362054:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3354050-3354200:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3345865-3345934:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3331416-3331482:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3330508-3330593:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3322595-3322693:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3309109-3309280:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3288779-3288874:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3286582-3286621:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3283397-3284061:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3271700-3271735:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3256181-3256285:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:3254451-3254504:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:3244320-3244487:-1:exon

adgrb2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: adgrb2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adhesion G protein-coupled receptor B2 isoform X1
translation: MTTAHHLISSVLLSLALLTFGFEVSENICSTLVSGVLHRSFSLHDIFPETFSGCSWTIENPDPTKYSIYLKFHKVKQICSHTSLMVLQLDHYIPNQTCSTLDYIDYDAVNLCETRNLFTFLQFDKDFVQFCLTSESVLTEHLGKNAMEFQILEVILLNNENSSQFGCGILCHWFESCLSKRNHYESCGINYSGCPCPDMRENESDSSTVLPFVESEFIASKLHSRNVDDFNVEKGSAKAGSDIKKERKIRRQHPRSADDSGTFMAQIGDPAAEEWSQWSVCSLTCGMGSQVRTRSCVASPYGTLCSGPLRETRVCNNSATCPVHGLWEEWSPWSLCSVTCGRGSRTRSRMCVAPQHGGKACQGPELQTKLCNIALCPVEGQWLHWGPWNRCSVTCSNGTQQRTRKCISTHGWTECKGHKAEARDCFNQECSSDGKWGPWNHWSLCSKTCDSGWQRRLRMCKGTSVKGYPCEGSGEEVRTCNHKRCPAPHEMCRDDYIMAMTWKRTVAGELVYNKCPPNATGSASRRCLLNSHGIAFWGPPSFARCVSHDYRHLYVSIREHLAKGQRTLAGEGMIQVIRTMLGLIARKNFYSGDLLFSADILRNVTDTFKRASYIPASGDIQKFFQIVSYMLEADNRAKWEDALQVAPGSIYLMRVVEDFIHIVGHGLKVFQSALIVTDNLVTSIQREPVSAVSSDISFPMKGRRGMKDWAKNSEDKLYIPKEVFTRSSSETDDSTYYVIGAVLYRTLGLILPVTKKSMAINSKVLTVTVRPQPKASEPIVVELSHLINGTSDSHCVVWDDSKIDSGPGSWDPQGCETVQTQTSHTKCLCNQLATIAILAQKPRESTMELTGVPSVPLMIGCGIACMALLTLLAVYAAFWRFIKSERSIILLNFCLSIMASNILILVGQTQIHSKGVCMMTAAFLHFFFLSSFCWVLTEAWQSYLAVLGKIRTRLIRKRFLCLGWGLPALIVAISVGFTKAKGYGTANYCWLSLEGGLLYAFVGPAAIIVLVNMLIGIIVFNKLMSRDGISDKSKKQRAGQATEARSSLMLKCSKCGVVSTTALSATITSNAMASLWSSCVVLPLLALTWMSAVLAMTDRRSILFQILFAVFDSVQGFVIITVHCFLRREIQDVVKCRTGSCKTEENENSPDSYKNGQVQIMTDFEKDVDLACQSVLFKEVNTCNPATITGTLSRISLDDEEDEKLNTNSEGMNFTTLPGNIPPGNVLVQLPPMHQLHNMMSGMNELNEQPAKKETNNELRGTLYLCTENTLKPVDVKWRRAQEQPLEGDYMVLPRRTVSLKPFIKEDSKLNINVDDNRHIIGGNQPIESEVYPNFASLDQININLNQPYGTLNHPRNVPIKQHPSVRHILASELADRSRTMPRSKPSATNSTGSLERKRVRYSDLDFEKVMHTRKRHSELYHELNQKFYTLGRFRDSESSGFKQEKQCSISPAGAEKSTLAEQTVPLEQSWDNFTSPPANTLHLDSQENLELHSPHWETSATIALDTSEGDFQTEV
SIO_010081: adgrb2
subclass of: SO_0000673
so part of: adgrb2
location: complement(join(3244320..3244487,3254451..3254504,3256181..3256285,3271700..3271735,3283397..3284061,3286582..3286621,3288779..3288874,3309109..3309280,3322595..3322693,3330508..3330593,3331416..3331482,3345865..3345934,3354050..3354200,3361952..3362054,3371122..3371225,3418559..3418685,3464575..3464618,3469946..3470045,3490520..3490595,3514423..3514569,3525632..3525740,3531577..3531645,3539447..3539641,3585500..3585606,3611153..3611254,3619960..3620124,3667708..3667869,3691157..3691321,3732666..3732830,3750545..3750628,3899145..3899862))
location: region:3244320-3899862:-1
so has part: feature:3899145-3899862:-1:exon
so has part: feature:3750545-3750628:-1:exon
so has part: feature:3732666-3732830:-1:exon
so has part: feature:3691157-3691321:-1:exon
so has part: feature:3667708-3667869:-1:exon
so has part: feature:3619960-3620124:-1:exon
so has part: feature:3611153-3611254:-1:exon
so has part: feature:3585500-3585606:-1:exon
so has part: feature:3539447-3539641:-1:exon
so has part: feature:3531577-3531645:-1:exon
so has part: feature:3525632-3525740:-1:exon
so has part: feature:3514423-3514569:-1:exon
so has part: feature:3490520-3490595:-1:exon
so has part: feature:3469946-3470045:-1:exon
so has part: feature:3464575-3464618:-1:exon
so has part: feature:3418559-3418685:-1:exon
so has part: feature:3371122-3371225:-1:exon
so has part: feature:3361952-3362054:-1:exon
so has part: feature:3354050-3354200:-1:exon
so has part: feature:3345865-3345934:-1:exon
so has part: feature:3331416-3331482:-1:exon
so has part: feature:3330508-3330593:-1:exon
so has part: feature:3322595-3322693:-1:exon
so has part: feature:3309109-3309280:-1:exon
so has part: feature:3288779-3288874:-1:exon
so has part: feature:3286582-3286621:-1:exon
so has part: feature:3283397-3284061:-1:exon
so has part: feature:3271700-3271735:-1:exon
so has part: feature:3256181-3256285:-1:exon
so has part: feature:3254451-3254504:-1:exon
so has part: feature:3244320-3244487:-1:exon

XP_048414062.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3899145-3899862:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3750545-3750628:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3732666-3732830:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3691157-3691321:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3667708-3667869:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3619960-3620124:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3611153-3611254:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3585500-3585606:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3539447-3539641:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3531577-3531645:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3525632-3525740:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3514423-3514569:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3490520-3490595:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3469946-3470045:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3464575-3464618:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3418559-3418685:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3371122-3371225:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3361952-3362054:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3354050-3354200:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3345865-3345934:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3331416-3331482:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3330508-3330593:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3322595-3322693:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3309109-3309280:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3288779-3288874:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3286582-3286621:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3283397-3284061:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3271700-3271735:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3256181-3256285:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:3254451-3254504:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:3244320-3244487:-1:exon

adgrb2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: adgrb2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adhesion G protein-coupled receptor B2 isoform X6
translation: MILMLKKVQQKLAVVLLTHLQAGGFWGLMEQLICLPEFQLVGTCFSGSDIKKERKIRRQHPRSADDSGTFMAQIGDPAAEEWSQWSVCSLTCGMGSQVRTRSCVASPYGTLCSGPLRETRVCNNSATCPVHGLWEEWSPWSLCSVTCGRGSRTRSRMCVAPQHGGKACQGPELQTKLCNIALCPVEGQWLHWGPWNRCSVTCSNGTQQRTRKCISTHGWTECKGHKAEARDCFNQECSSDGKWGPWNHWSLCSKTCDSGWQRRLRMCKGTSVKGYPCEGSGEEVRTCNHKRCPAPHEMCRDDYIMAMTWKRTVAGELVYNKCPPNATGSASRRCLLNSHGIAFWGPPSFARCVSHDYRHLYVSIREHLAKGQRTLAGEGMIQVIRTMLGLIARKNFYSGDLLFSADILRNVTDTFKRASYIPASGDIQKFFQIVSYMLEADNRAKWEDALQVAPGSIYLMRVVEDFIHIVGHGLKVFQSALIVTDNLVTSIQREPVSAVSSDISFPMKGRRGMKDWAKNSEDKLYIPKEVFTRSSSETDDSTYYVIGAVLYRTLGLILPVTKKSMAINSKVLTVTVRPQPKASEPIVVELSHLINGTSDSHCVVWDDSKIDSGPGSWDPQGCETVQTQTSHTKCLCNQLATIAILAQKPRESTMELTGVPSVPLMIGCGIACMALLTLLAVYAAFWRFIKSERSIILLNFCLSIMASNILILVGQTQIHSKGVCMMTAAFLHFFFLSSFCWVLTEAWQSYLAVLGKIRTRLIRKRFLCLGWGLPALIVAISVGFTKAKGYGTANYCWLSLEGGLLYAFVGPAAIIVLVNMLIGIIVFNKLMSRDGISDKSKKQRAGQATEARSSLMLKCSKCGVVSTTALSATITSNAMASLWSSCVVLPLLALTWMSAVLAMTDRRSILFQILFAVFDSVQGFVIITVHCFLRREIQDVVKCRTGSCKTEENENSPDSYKNGQVQIMTDFEKDVDLACQSVLFKEVNTCNPATITGTLSRISLDDEEDEKLNTNSEGMNFTTLPGNIPPGNVLVQLPPMHQLHNMMSGMNELNEQPAKKETNNELRGTLYLCTENTLKPVDVKWRRAQEQPLEGDYMVLPRRTVSLKPFIKEDSKLNINVDDNRHIIGGNQPIESEVYPNFASLDQININLNQPYGTLNHPRNVPIKQHPSVRHILASELADRSRTMPRSKPSATNSTGSLERKRVRYSDLDFEKVMHTRKRHSELYHELNQKFYTLGRFRDSESSGFKQEKQCSISPAGAEKSTLAEQTVPLEQSWDNFTSPPANTLHLDSQENLELHSPHWETSATIALDTSEGDFQTEV
SIO_010081: adgrb2
subclass of: SO_0000673
so part of: adgrb2
location: complement(join(3244320..3244487,3254451..3254504,3256181..3256285,3271700..3271735,3283397..3284061,3286582..3286621,3288779..3288874,3309109..3309280,3322595..3322693,3330508..3330593,3331416..3331482,3345865..3345934,3354050..3354200,3361952..3362054,3371122..3371225,3418559..3418685,3464575..3464618,3469946..3470045,3490520..3490595,3514423..3514569,3525632..3525740,3531577..3531645,3539447..3539641,3585500..3585606,3611153..3611254,3619960..3620124,3667708..3667869,3691157..3691321,3732666..3732830,3750545..3750628,3840206..3840308,3899145..3899180))
location: region:3244320-3899180:-1
so has part: feature:3899145-3899180:-1:exon
so has part: feature:3840206-3840308:-1:exon
so has part: feature:3750545-3750628:-1:exon
so has part: feature:3732666-3732830:-1:exon
so has part: feature:3691157-3691321:-1:exon
so has part: feature:3667708-3667869:-1:exon
so has part: feature:3619960-3620124:-1:exon
so has part: feature:3611153-3611254:-1:exon
so has part: feature:3585500-3585606:-1:exon
so has part: feature:3539447-3539641:-1:exon
so has part: feature:3531577-3531645:-1:exon
so has part: feature:3525632-3525740:-1:exon
so has part: feature:3514423-3514569:-1:exon
so has part: feature:3490520-3490595:-1:exon
so has part: feature:3469946-3470045:-1:exon
so has part: feature:3464575-3464618:-1:exon
so has part: feature:3418559-3418685:-1:exon
so has part: feature:3371122-3371225:-1:exon
so has part: feature:3361952-3362054:-1:exon
so has part: feature:3354050-3354200:-1:exon
so has part: feature:3345865-3345934:-1:exon
so has part: feature:3331416-3331482:-1:exon
so has part: feature:3330508-3330593:-1:exon
so has part: feature:3322595-3322693:-1:exon
so has part: feature:3309109-3309280:-1:exon
so has part: feature:3288779-3288874:-1:exon
so has part: feature:3286582-3286621:-1:exon
so has part: feature:3283397-3284061:-1:exon
so has part: feature:3271700-3271735:-1:exon
so has part: feature:3256181-3256285:-1:exon
so has part: feature:3254451-3254504:-1:exon
so has part: feature:3244320-3244487:-1:exon

XP_048414067.1
type: Protein
SIO_000068: ncbiprotein

position:3899180:-1
position: 3899180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3899145-3899180:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3840206-3840308:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3750545-3750628:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3732666-3732830:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3691157-3691321:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3667708-3667869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3619960-3620124:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3611153-3611254:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3585500-3585606:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3539447-3539641:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3531577-3531645:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3525632-3525740:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3514423-3514569:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3490520-3490595:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3469946-3470045:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3464575-3464618:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3418559-3418685:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3371122-3371225:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3361952-3362054:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3354050-3354200:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3345865-3345934:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3331416-3331482:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3330508-3330593:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3322595-3322693:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3309109-3309280:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3288779-3288874:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3286582-3286621:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3283397-3284061:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3271700-3271735:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:3256181-3256285:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:3254451-3254504:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:3244320-3244487:-1:exon

adgrb2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: adgrb2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adhesion G protein-coupled receptor B2 isoform X7
translation: MGSQVRTRSCVASPYGTLCSGPLRETRVCNNSATCPVHGLWEEWSPWSLCSVTCGRGSRTRSRMCVAPQHGGKACQGPELQTKLCNIALCPVEGQWLHWGPWNRCSVTCSNGTQQRTRKCISTHGWTECKGHKAEARDCFNQECSSDGKWGPWNHWSLCSKTCDSGWQRRLRMCKGTSVKGYPCEGSGEEVRTCNHKRCPAPHEMCRDDYIMAMTWKRTVAGELVYNKCPPNATGSASRRCLLNSHGIAFWGPPSFARCVSHDYRHLYVSIREHLAKGQRTLAGEGMIQVIRTMLGLIARKNFYSGDLLFSADILRNVTDTFKRASYIPASGDIQKFFQIVSYMLEADNRAKWEDALQVAPGSIYLMRVVEDFIHIVGHGLKVFQSALIVTDNLVTSIQREPVSAVSSDISFPMKGRRGMKDWAKNSEDKLYIPKEVFTRSSSETDDSTYYVIGAVLYRTLGLILPVTKKSMAINSKVLTVTVRPQPKASEPIVVELSHLINGTSDSHCVVWDDSKIDSGPGSWDPQGCETVQTQTSHTKCLCNQLATIAILAQKPRESTMELTGVPSVPLMIGCGIACMALLTLLAVYAAFWRFIKSERSIILLNFCLSIMASNILILVGQTQIHSKGVCMMTAAFLHFFFLSSFCWVLTEAWQSYLAVLGKIRTRLIRKRFLCLGWGLPALIVAISVGFTKAKGYGTANYCWLSLEGGLLYAFVGPAAIIVLVNMLIGIIVFNKLMSRDGISDKSKKQRAGQATEARSSLMLKCSKCGVVSTTALSATITSNAMASLWSSCVVLPLLALTWMSAVLAMTDRRSILFQILFAVFDSVQGFVIITVHCFLRREIQDVVKCRTGSCKTEENENSPDSYKNGQVQIMTDFEKDVDLACQSVLFKEVNTCNPATITGTLSRISLDDEEDEKLNTNSEGMNFTTLPGNIPPGNVLVQLPPMHQLHNMMSGMNELNEQPAKKETNNELRGTLYLCTENTLKPVDVKWRRAQEQPLEGDYMVLPRRTVSLKPFIKEDSKLNINVDDNRHIIGGNQPIESEVYPNFASLDQININLNQPYGTLNHPRNVPIKQHPSVRHILASELADRSRTMPRSKPSATNSTGSLERKRVRYSDLDFEKVMHTRKRHSELYHELNQKFYTLGRFRDSESSGFKQEKQCSISPAGAEKSTLAEQTVPLEQSWDNFTSPPANTLHLDSQENLELHSPHWETSATIALDTSEGDFQTEV
SIO_010081: adgrb2
subclass of: SO_0000673
so part of: adgrb2
location: complement(join(3244320..3244487,3254451..3254504,3256181..3256285,3271700..3271735,3283397..3284061,3286582..3286621,3288779..3288874,3309109..3309280,3322595..3322693,3330508..3330593,3331416..3331482,3345865..3345934,3354050..3354200,3361952..3362054,3371122..3371225,3418559..3418685,3464575..3464618,3469946..3470045,3490520..3490595,3514423..3514569,3525632..3525740,3531577..3531645,3539447..3539641,3585500..3585606,3611153..3611254,3619960..3620124,3667708..3667869,3691157..3691321,3732666..3732774))
location: region:3244320-3732774:-1
so has part: feature:3732666-3732774:-1:exon
so has part: feature:3691157-3691321:-1:exon
so has part: feature:3667708-3667869:-1:exon
so has part: feature:3619960-3620124:-1:exon
so has part: feature:3611153-3611254:-1:exon
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so has part: feature:3525632-3525740:-1:exon
so has part: feature:3514423-3514569:-1:exon
so has part: feature:3490520-3490595:-1:exon
so has part: feature:3469946-3470045:-1:exon
so has part: feature:3464575-3464618:-1:exon
so has part: feature:3418559-3418685:-1:exon
so has part: feature:3371122-3371225:-1:exon
so has part: feature:3361952-3362054:-1:exon
so has part: feature:3354050-3354200:-1:exon
so has part: feature:3345865-3345934:-1:exon
so has part: feature:3331416-3331482:-1:exon
so has part: feature:3330508-3330593:-1:exon
so has part: feature:3322595-3322693:-1:exon
so has part: feature:3309109-3309280:-1:exon
so has part: feature:3288779-3288874:-1:exon
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so has part: feature:3283397-3284061:-1:exon
so has part: feature:3271700-3271735:-1:exon
so has part: feature:3256181-3256285:-1:exon
so has part: feature:3254451-3254504:-1:exon
so has part: feature:3244320-3244487:-1:exon

XP_048414069.1
type: Protein
SIO_000068: ncbiprotein

position:3732774:-1
position: 3732774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3732666-3732774:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3691157-3691321:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3667708-3667869:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3619960-3620124:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3611153-3611254:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3585500-3585606:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3539447-3539641:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3531577-3531645:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3525632-3525740:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3514423-3514569:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3490520-3490595:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3469946-3470045:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3464575-3464618:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3418559-3418685:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3371122-3371225:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3361952-3362054:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3354050-3354200:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3345865-3345934:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3331416-3331482:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3330508-3330593:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3322595-3322693:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3309109-3309280:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3288779-3288874:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3286582-3286621:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3283397-3284061:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3271700-3271735:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3256181-3256285:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3254451-3254504:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3244320-3244487:-1:exon

adgrb2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 378071
gene: adgrb2
product: adhesion G protein-coupled receptor B2, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_007250162.1
SIO_010081: adgrb2
so part of: adgrb2
location: complement(join(3244476..3244487,3256181..3256285,3256426..3256544,3271700..3271735,3283397..3284061,3286582..3286621,3288779..3288874,3309109..3309280,3322595..3322693,3330508..3330593,3331416..3331482,3345865..3345934,3354050..3354200,3361952..3362054,3371122..3371225,3418559..3418685,3464575..3464618,3469946..3470045,3490520..3490595,3514423..3514569,3525632..3525740,3531577..3531645,3539447..3539641,3585500..3585606,3611153..3611254,3619960..3620124,3667708..3667869,3691157..3691321,3732666..3732830,3750545..3750628,3899145..3899877,3924261..3924579))
location: region:3244476-3924579:-1
so has part: feature:3924261-3924579:-1:exon
so has part: feature:3899145-3899877:-1:exon
so has part: feature:3750545-3750628:-1:exon
so has part: feature:3732666-3732830:-1:exon
so has part: feature:3691157-3691321:-1:exon
so has part: feature:3667708-3667869:-1:exon
so has part: feature:3619960-3620124:-1:exon
so has part: feature:3611153-3611254:-1:exon
so has part: feature:3585500-3585606:-1:exon
so has part: feature:3539447-3539641:-1:exon
so has part: feature:3531577-3531645:-1:exon
so has part: feature:3525632-3525740:-1:exon
so has part: feature:3514423-3514569:-1:exon
so has part: feature:3490520-3490595:-1:exon
so has part: feature:3469946-3470045:-1:exon
so has part: feature:3464575-3464618:-1:exon
so has part: feature:3418559-3418685:-1:exon
so has part: feature:3371122-3371225:-1:exon
so has part: feature:3361952-3362054:-1:exon
so has part: feature:3354050-3354200:-1:exon
so has part: feature:3345865-3345934:-1:exon
so has part: feature:3331416-3331482:-1:exon
so has part: feature:3330508-3330593:-1:exon
so has part: feature:3322595-3322693:-1:exon
so has part: feature:3309109-3309280:-1:exon
so has part: feature:3288779-3288874:-1:exon
so has part: feature:3286582-3286621:-1:exon
so has part: feature:3283397-3284061:-1:exon
so has part: feature:3271700-3271735:-1:exon
so has part: feature:3256426-3256544:-1:exon
so has part: feature:3256181-3256285:-1:exon
so has part: feature:3244476-3244487:-1:exon

position:3244476:-1
position: 3244476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3924261-3924579:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3899145-3899877:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3750545-3750628:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3732666-3732830:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3691157-3691321:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3667708-3667869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3619960-3620124:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3611153-3611254:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3585500-3585606:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3539447-3539641:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3531577-3531645:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3525632-3525740:-1:exon

urn:…
SIO_000300: 13
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 17
SIO_000628: feature:3418559-3418685:-1:exon

urn:…
SIO_000300: 18
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urn:…
SIO_000300: 19
SIO_000628: feature:3361952-3362054:-1:exon

urn:…
SIO_000300: 20
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urn:…
SIO_000300: 21
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urn:…
SIO_000300: 22
SIO_000628: feature:3331416-3331482:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3330508-3330593:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3322595-3322693:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3309109-3309280:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3288779-3288874:-1:exon

urn:…
SIO_000300: 27
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urn:…
SIO_000300: 28
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urn:…
SIO_000300: 29
SIO_000628: feature:3271700-3271735:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:3256426-3256544:-1:exon

position:3256426:-1
position: 3256426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3256544:-1
position: 3256544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:3256181-3256285:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:3244476-3244487:-1:exon

adgrb2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: adgrb2
product: adhesion G protein-coupled receptor B2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048558108.1
SIO_010081: adgrb2
subclass of: SO_0000673
so part of: adgrb2
location: complement(join(3270435..3270724,3271700..3271735,3283397..3284061,3286582..3286621,3288779..3288874,3309109..3309280,3322595..3322693,3330508..3330593,3331416..3331482,3345865..3345934,3354050..3354200,3361952..3362054,3371122..3371225,3418559..3418685,3464575..3464618,3469946..3470045,3490520..3490595,3514423..3514569,3525632..3525740,3531577..3531645,3539447..3539641,3585500..3585606,3611153..3611254,3619960..3620124,3667708..3667869,3691157..3691321,3732666..3732830,3750545..3750628,3899145..3899877,3924261..3924579))
location: region:3270435-3924579:-1
so has part: feature:3924261-3924579:-1:exon
so has part: feature:3899145-3899877:-1:exon
so has part: feature:3750545-3750628:-1:exon
so has part: feature:3732666-3732830:-1:exon
so has part: feature:3691157-3691321:-1:exon
so has part: feature:3667708-3667869:-1:exon
so has part: feature:3619960-3620124:-1:exon
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so has part: feature:3585500-3585606:-1:exon
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so has part: feature:3531577-3531645:-1:exon
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so has part: feature:3514423-3514569:-1:exon
so has part: feature:3490520-3490595:-1:exon
so has part: feature:3469946-3470045:-1:exon
so has part: feature:3464575-3464618:-1:exon
so has part: feature:3418559-3418685:-1:exon
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so has part: feature:3309109-3309280:-1:exon
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so has part: feature:3286582-3286621:-1:exon
so has part: feature:3283397-3284061:-1:exon
so has part: feature:3271700-3271735:-1:exon
so has part: feature:3270435-3270724:-1:exon

position:3270435:-1
position: 3270435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3924261-3924579:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3899145-3899877:-1:exon

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SIO_000300: 3
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 23
SIO_000628: feature:3330508-3330593:-1:exon

urn:…
SIO_000300: 24
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 28
SIO_000628: feature:3283397-3284061:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3271700-3271735:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:3270435-3270724:-1:exon

position:3270724:-1
position: 3270724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

adgrb2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: adgrb2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adhesion G protein-coupled receptor B2 isoform X4
translation: MTTAHHLISSVLLSLALLTFGFEVSENICSTLVSGVLHRSFSLHDIFPETFSGCSWTIENPDPTKYSIYLKFHKVKQICSHTSLMVLQLDHYIPNQTCSTLDYIDYDAVNLCETRNLFTFLQFDKDFVQFCLTSESVLTEHLGKNAMEFQILEVILLNNENSSQFGCGILCHWFESCLSKRNHYESCGINYSGCPCPDMRENESDSSTVLPFVESEFIASKLHSRNVDDFNVEKGSAKAGSDIKKERKIRRQHPRSADDSGTFMAQIGDPAAEEWSQWSVCSLTCGMGSQVRTRSCVASPYGTLCSGPLRETRVCNNSATCPVHGLWEEWSPWSLCSVTCGRGSRTRSRMCVAPQHGGKACQGPELQTKLCNIALCPVEGQWLHWGPWNRCSVTCSNGTQQRTRKCISTHGWTECKGHKAEARDCFNQECSSDGKWGPWNHWSLCSKTCDSGWQRRLRMCKGTSVKGYPCEGSGEEVRTCNHKRCPAPHEMCRDDYIMAMTWKRTVAGELVYNKCPPNATGSASRRCLLNSHGIAFWGPPSFARCVSHDYRHLYVSIREHLAKGQRTLAGEGMIQVIRTMLGLIARKNFYSGDLLFSADILRNVTDTFKRASYIPASGDIQKFFQIVSYMLEADNRAKWEDALQVAPGSIYLMRVVEDFIHIVGHGLKVFQSALIVTDNLVTSIQREPVSAVSSDISFPMKGRRGMKDWAKNSEDKLYIPKEVFTRSSSETDDSTYYVIGAVLYRTLGLILPVTKKSMAINSKVLTVTVRPQPKASEPIVVELSHLINGTSDSHCVVWDDSKIDSGPGSWDPQGCETVQTQTSHTKCLCNQLATIAILAQKPRESTMELTGVPSVPLMIGCGIACMALLTLLAVYAAFWRFIKSERSIILLNFCLSIMASNILILVGQTQIHSKGVCMMTAAFLHFFFLSSFCWVLTEAWQSYLAVLGKIRTRLIRKRFLCLGWGLPALIVAISVGFTKAKGYGTANYCWLSLEGGLLYAFVGPAAIIVLVNMLIGIIVFNKLMSRDGISDKSKKQRAGQATEARSSLMLKCSKCGVVSTTALSATITSNAMASLWSSCVVLPLLALTWMSAVLAMTDRRSILFQILFAVFDSVQGFVIITVHCFLRREIQDVVKCRTGSCKTEENENSPDSYKNGQVQIMTDFEKDVDLACQSVLFKEVNTCNPATITGTLSRISLDDEEDEKLNTNSEGMNFTTLPGNIPPGNVLVQLPPMHQLHNMMSGMNELNEQPAKKETNNELRGTLYLCTENTLKPVDVKWRRAQEQPLEGDYMVLPRRTVSLKPFIKEDSKLNINVDDNRHIIGGNQPIESEVYPNFASLDQININLNQPYGTLNHPRNVPIKQHPSVRHILASELADRSRTMPRSKPSATNSTGSLERKRVRYSDLDFELLPVLLSFSSSLSFIPSQLFYSKKNNPGLPTFAHTSDPLAPGSILVHLHPSSAVISLL
SIO_010081: adgrb2
subclass of: SO_0000673
so part of: adgrb2
location: complement(join(3270548..3270724,3271700..3271735,3283397..3284061,3286582..3286621,3288779..3288874,3309109..3309280,3322595..3322693,3330508..3330593,3331416..3331482,3345865..3345934,3354050..3354200,3361952..3362054,3371122..3371225,3418559..3418685,3464575..3464618,3469946..3470045,3490520..3490595,3514423..3514569,3525632..3525740,3531577..3531645,3539447..3539641,3585500..3585606,3611153..3611254,3619960..3620124,3667708..3667869,3691157..3691321,3732666..3732830,3750545..3750628,3899145..3899862))
location: region:3270548-3899862:-1
so has part: feature:3899145-3899862:-1:exon
so has part: feature:3750545-3750628:-1:exon
so has part: feature:3732666-3732830:-1:exon
so has part: feature:3691157-3691321:-1:exon
so has part: feature:3667708-3667869:-1:exon
so has part: feature:3619960-3620124:-1:exon
so has part: feature:3611153-3611254:-1:exon
so has part: feature:3585500-3585606:-1:exon
so has part: feature:3539447-3539641:-1:exon
so has part: feature:3531577-3531645:-1:exon
so has part: feature:3525632-3525740:-1:exon
so has part: feature:3514423-3514569:-1:exon
so has part: feature:3490520-3490595:-1:exon
so has part: feature:3469946-3470045:-1:exon
so has part: feature:3464575-3464618:-1:exon
so has part: feature:3418559-3418685:-1:exon
so has part: feature:3371122-3371225:-1:exon
so has part: feature:3361952-3362054:-1:exon
so has part: feature:3354050-3354200:-1:exon
so has part: feature:3345865-3345934:-1:exon
so has part: feature:3331416-3331482:-1:exon
so has part: feature:3330508-3330593:-1:exon
so has part: feature:3322595-3322693:-1:exon
so has part: feature:3309109-3309280:-1:exon
so has part: feature:3288779-3288874:-1:exon
so has part: feature:3286582-3286621:-1:exon
so has part: feature:3283397-3284061:-1:exon
so has part: feature:3271700-3271735:-1:exon
so has part: feature:3270548-3270724:-1:exon

XP_048414065.1
type: Protein
SIO_000068: ncbiprotein

position:3270548:-1
position: 3270548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3899145-3899862:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3750545-3750628:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3732666-3732830:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3691157-3691321:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3667708-3667869:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3619960-3620124:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3611153-3611254:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3585500-3585606:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3539447-3539641:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3531577-3531645:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3525632-3525740:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3514423-3514569:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3490520-3490595:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3469946-3470045:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3464575-3464618:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3418559-3418685:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3371122-3371225:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3361952-3362054:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3354050-3354200:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3345865-3345934:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3331416-3331482:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3330508-3330593:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3322595-3322693:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3309109-3309280:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3288779-3288874:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3286582-3286621:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3283397-3284061:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3271700-3271735:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3270548-3270724:-1:exon

adgrb2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: adgrb2
product: adhesion G protein-coupled receptor B2, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048558113.1
SIO_010081: adgrb2
subclass of: SO_0000673
so part of: adgrb2
location: complement(join(3283852..3284061,3286582..3286617,3288779..3288874,3309109..3309280,3322595..3322693,3330508..3330593,3331416..3331482,3345865..3345934,3354050..3354200,3361952..3362054,3371122..3371225,3418559..3418685,3464575..3464618,3469946..3470045,3490520..3490595,3514423..3514569,3525632..3525740,3531577..3531645,3539447..3539641,3585500..3585606,3611153..3611254,3619960..3620124,3667708..3667869,3691157..3691321,3732666..3732830,3750545..3750628,3899145..3899877,3924261..3924579))
location: region:3283852-3924579:-1
so has part: feature:3924261-3924579:-1:exon
so has part: feature:3899145-3899877:-1:exon
so has part: feature:3750545-3750628:-1:exon
so has part: feature:3732666-3732830:-1:exon
so has part: feature:3691157-3691321:-1:exon
so has part: feature:3667708-3667869:-1:exon
so has part: feature:3619960-3620124:-1:exon
so has part: feature:3611153-3611254:-1:exon
so has part: feature:3585500-3585606:-1:exon
so has part: feature:3539447-3539641:-1:exon
so has part: feature:3531577-3531645:-1:exon
so has part: feature:3525632-3525740:-1:exon
so has part: feature:3514423-3514569:-1:exon
so has part: feature:3490520-3490595:-1:exon
so has part: feature:3469946-3470045:-1:exon
so has part: feature:3464575-3464618:-1:exon
so has part: feature:3418559-3418685:-1:exon
so has part: feature:3371122-3371225:-1:exon
so has part: feature:3361952-3362054:-1:exon
so has part: feature:3354050-3354200:-1:exon
so has part: feature:3345865-3345934:-1:exon
so has part: feature:3331416-3331482:-1:exon
so has part: feature:3330508-3330593:-1:exon
so has part: feature:3322595-3322693:-1:exon
so has part: feature:3309109-3309280:-1:exon
so has part: feature:3288779-3288874:-1:exon
so has part: feature:3286582-3286617:-1:exon
so has part: feature:3283852-3284061:-1:exon

position:3283852:-1
position: 3283852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3924261-3924579:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3899145-3899877:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3750545-3750628:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3732666-3732830:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3691157-3691321:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3667708-3667869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3619960-3620124:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3611153-3611254:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3585500-3585606:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3539447-3539641:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3531577-3531645:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3525632-3525740:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3514423-3514569:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3490520-3490595:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3469946-3470045:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3464575-3464618:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3418559-3418685:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3371122-3371225:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3361952-3362054:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3354050-3354200:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3345865-3345934:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3331416-3331482:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3330508-3330593:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3322595-3322693:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3309109-3309280:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3288779-3288874:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3286582-3286617:-1:exon

position:3286617:-1
position: 3286617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:3283852-3284061:-1:exon

adgrb2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: adgrb2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adhesion G protein-coupled receptor B2 isoform X8
translation: MTTAHHLISSVLLSLALLTFGFEVSENICSTLVSGVLHRSFSLHDIFPETFSGCSWTIENPDPTKYSIYLKFHKVKQICSHTSLMVLQLDHYIPNQTCSTLDYIDYDAVNLCETRNLFTFLQFDKDFVQFCLTSESVLTEHLGKNAMEFQILEVILLNNENSSQFGCGILCHWFESCLSKRNHYESCGINYSGCPCPDMRENESDSSTVLPFVESEFIASKLHSRNVDDFNVEKGSAKAGSDIKKERKIRRQHPRSADDSGTFMAQIGDPAAEEWSQWSVCSLTCGMGSQVRTRSCVASPYGTLCSGPLRETRVCNNSATCPVHGLWEEWSPWSLCSVTCGRGSRTRSRMCVAPQHGGKACQGPELQTKLCNIALCPVEGQWLHWGPWNRCSVTCSNGTQQRTRKCISTHGWTECKGHKAEARDCFNQECSSDGKWGPWNHWSLCSKTCDSGWQRRLRMCKGTSVKGYPCEGSGEEVRTCNHKRCPAPHEMCRDDYIMAMTWKRTVAGELVYNKCPPNATGSASRRCLLNSHGIAFWGPPSFARCVSHDYRHLYVSIREHLAKGQRTLAGEGMIQVIRTMLGLIARKNFYSGDLLFSADILRNVTDTFKRASYIPASGDIQKFFQIVSYMLEADNRAKWEDALQVAPGSIYLMRVVEDFIHIVGHGLKVFQSALIVTDNLVTSIQREPVSAVSSDISFPMKGRRGMKDWAKNSEDKLYIPKEVFTRSSSETDDSTYYVIGAVLYRTLGLILPVTKKSMAINSKVLTVTVRPQPKASEPIVVELSHLINGTSDSHCVVWDDSKIDSGPGSWDPQGCETVQTQTSHTKCLCNQLATIAILAQKPRESTMELTGVPSVPLMIGCGIACMALLTLLAVYAAFWRFIKSERSIILLNFCLSIMASNILILVGQTQIHSKGVCMMTAAFLHFFFLSSFCWVLTEAWQSYLAVLGKIRTRLIRKRFLCLGWGLPALIVAISVGFTKAKGYGTANYCWLSLEGGLLYAFVGPAAIIVLVNMLIGIIVFNKLMSRDGISDKSKKQRAGQATEARSSLMLKCSKCGVVSTTALSATITSNAMASLWSSCVVLPLLALTWMSAVLAMTDRRSILFQILFAVFDSVQGFVIITVHCFLRREIQDVVKCRTGSCKTEENENSPDSYKNGQVQIMILKRTWTWPASRCSSRRLILVILQLLLEHCLVFHWMMRRMRS
SIO_010081: adgrb2
subclass of: SO_0000673
so part of: adgrb2
location: complement(join(3283969..3284061,3286582..3286617,3288779..3288874,3309109..3309280,3322595..3322693,3330508..3330593,3331416..3331482,3345865..3345934,3354050..3354200,3361952..3362054,3371122..3371225,3418559..3418685,3464575..3464618,3469946..3470045,3490520..3490595,3514423..3514569,3525632..3525740,3531577..3531645,3539447..3539641,3585500..3585606,3611153..3611254,3619960..3620124,3667708..3667869,3691157..3691321,3732666..3732830,3750545..3750628,3899145..3899862))
location: region:3283969-3899862:-1
so has part: feature:3899145-3899862:-1:exon
so has part: feature:3750545-3750628:-1:exon
so has part: feature:3732666-3732830:-1:exon
so has part: feature:3691157-3691321:-1:exon
so has part: feature:3667708-3667869:-1:exon
so has part: feature:3619960-3620124:-1:exon
so has part: feature:3611153-3611254:-1:exon
so has part: feature:3585500-3585606:-1:exon
so has part: feature:3539447-3539641:-1:exon
so has part: feature:3531577-3531645:-1:exon
so has part: feature:3525632-3525740:-1:exon
so has part: feature:3514423-3514569:-1:exon
so has part: feature:3490520-3490595:-1:exon
so has part: feature:3469946-3470045:-1:exon
so has part: feature:3464575-3464618:-1:exon
so has part: feature:3418559-3418685:-1:exon
so has part: feature:3371122-3371225:-1:exon
so has part: feature:3361952-3362054:-1:exon
so has part: feature:3354050-3354200:-1:exon
so has part: feature:3345865-3345934:-1:exon
so has part: feature:3331416-3331482:-1:exon
so has part: feature:3330508-3330593:-1:exon
so has part: feature:3322595-3322693:-1:exon
so has part: feature:3309109-3309280:-1:exon
so has part: feature:3288779-3288874:-1:exon
so has part: feature:3286582-3286617:-1:exon
so has part: feature:3283969-3284061:-1:exon

XP_048414070.1
type: Protein
SIO_000068: ncbiprotein

position:3283969:-1
position: 3283969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3899145-3899862:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3750545-3750628:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3732666-3732830:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3691157-3691321:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3667708-3667869:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3619960-3620124:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3611153-3611254:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3585500-3585606:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3539447-3539641:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3531577-3531645:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3525632-3525740:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3514423-3514569:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3490520-3490595:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3469946-3470045:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3464575-3464618:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3418559-3418685:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3371122-3371225:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3361952-3362054:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3354050-3354200:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3345865-3345934:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3331416-3331482:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3330508-3330593:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3322595-3322693:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3309109-3309280:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3288779-3288874:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3286582-3286617:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3283969-3284061:-1:exon

LOC125464873
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125464873
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4502341..4503960)
location: region:4502341-4503960:-1
so has part: feature:4502341-4503960:-1:exon
subclass of: SO_0000010

125464873
type: Gene
SIO_000068: ncbigene

position:4502341:-1
position: 4502341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4503960:-1
position: 4503960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4502341-4503960:-1:exon

LOC125464873
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125464873
product: proline-rich protein 36-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_048557736.1
SIO_010081: LOC125464873
subclass of: SO_0000673
so part of: LOC125464873
location: complement(4502341..4503960)
location: region:4502341-4503960:-1
so has part: feature:4502341-4503960:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4502341-4503960:-1:exon

LOC125464873
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125464873
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-rich protein 36-like
translation: MRTLSLALGQIPPRALQLQPQALQLPPRALQLPPRALQLPPRALQLPPRALQLPPRALQLPLRALQLPPRALQLLPRALQLPPRALQLPPRALQLPHRALQLPPRALQLPSWALDLQPWALQLPRQALRLPSRALQLPLRALQLPVELSNSHPELFNSHWALQLPPRALQLPPGLSSSHPSSPAPTPGSPAPTRALQRPPWSLQLPPRLSNAHPSASTPTPGSPTPTRALQLPPRALQLSPERFNSYPGLSISHTGLSNSHPEFSNSHAGPPLPTGNFNSQPGSPSPSWALELPPELSNYHPALQFQLGLSNSHPGSPTPTWALQLPRQAHQLPPQDLQLPPELSNSHPGLSNSWPGSPTSSRDLQLRSPGLSNPHPSSPTPNPGSPTPTRDLQLHPPHALQLPPELSSSHPGLSSSHPGLSNSHPGSPTPSRALQLSPRALQLPPGLSKTLLNSPTPMRALHLPPGTSTPTWALQIPAGLSSCHLSSPTTTRLSNSHPGSPTPTPSSSAPTRALQLQPELYSSHPSSPTPTLGSPTIT
SIO_010081: LOC125464873
subclass of: SO_0000673
so part of: LOC125464873
location: complement(4502341..4503960)
location: region:4502341-4503960:-1
so has part: feature:4502341-4503960:-1:exon

XP_048413693.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4502341-4503960:-1:exon

LOC125465064
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125465064
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5158692..5192676
location: region:5158692-5192676:1
so has part: feature:5158692-5192676:1:exon
subclass of: SO_0000011

125465064
type: Gene
SIO_000068: ncbigene

position:5158692:1
position: 5158692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5192676:1
position: 5192676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5158692-5192676:1:exon

LOC125465064
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 378071
nc RNA class: lncRNA
gene: LOC125465064
product: uncharacterized LOC125465064
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_007250165.1
SIO_010081: LOC125465064
subclass of: SO_0000673
so part of: LOC125465064
location: join(5158692..5158837,5163859..5164035,5189823..5192676)
location: region:5158692-5192676:1
so has part: feature:5158692-5158837:1:exon
so has part: feature:5163859-5164035:1:exon
so has part: feature:5189823-5192676:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5158692-5158837:1:exon

position:5158837:1
position: 5158837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5163859-5164035:1:exon

position:5163859:1
position: 5163859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5164035:1
position: 5164035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5189823-5192676:1:exon

position:5189823:1
position: 5189823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125465154
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125465154
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5445072..5489355)
location: region:5445072-5489355:-1
so has part: feature:5445072-5489355:-1:exon
subclass of: SO_0000010

125465154
type: Gene
SIO_000068: ncbigene

position:5445072:-1
position: 5445072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5489355:-1
position: 5489355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5445072-5489355:-1:exon

LOC125465154
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465154
product: PHD finger protein 3-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048558357.1
SIO_010081: LOC125465154
subclass of: SO_0000673
so part of: LOC125465154
location: complement(join(5445072..5447121,5458727..5458922,5465968..5466057,5468417..5468528,5486773..5486962,5489191..5489355))
location: region:5445072-5489355:-1
so has part: feature:5489191-5489355:-1:exon
so has part: feature:5486773-5486962:-1:exon
so has part: feature:5468417-5468528:-1:exon
so has part: feature:5465968-5466057:-1:exon
so has part: feature:5458727-5458922:-1:exon
so has part: feature:5445072-5447121:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5489191-5489355:-1:exon

position:5489191:-1
position: 5489191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5486773-5486962:-1:exon

position:5486773:-1
position: 5486773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5486962:-1
position: 5486962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5468417-5468528:-1:exon

position:5468417:-1
position: 5468417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5468528:-1
position: 5468528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5465968-5466057:-1:exon

position:5465968:-1
position: 5465968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5466057:-1
position: 5466057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5458727-5458922:-1:exon

position:5458727:-1
position: 5458727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5458922:-1
position: 5458922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5445072-5447121:-1:exon

position:5447121:-1
position: 5447121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125465154
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465154
product: PHD finger protein 3-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048558358.1
SIO_010081: LOC125465154
subclass of: SO_0000673
so part of: LOC125465154
location: complement(join(5445072..5447121,5458727..5458922,5465968..5466057,5468417..5468528,5478339..5478376,5486773..5486818))
location: region:5445072-5486818:-1
so has part: feature:5486773-5486818:-1:exon
so has part: feature:5478339-5478376:-1:exon
so has part: feature:5468417-5468528:-1:exon
so has part: feature:5465968-5466057:-1:exon
so has part: feature:5458727-5458922:-1:exon
so has part: feature:5445072-5447121:-1:exon

position:5486818:-1
position: 5486818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5486773-5486818:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5478339-5478376:-1:exon

position:5478339:-1
position: 5478339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5478376:-1
position: 5478376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5468417-5468528:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5465968-5466057:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5458727-5458922:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5445072-5447121:-1:exon

LOC125465154
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465154
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PHD finger protein 3-like isoform X1
translation: MVFCCSSIWNCGLKGPMVPPMKSGLRRTKESCLASNLLNSAPDILGDEITLLESKCFSPKENTAGLPNPSKCPAALKRFHPQTHVVWKGFIQVLNMKRFLVKAYPVLGRTDHLTEALSTTITVGKCVLPEPIWDSVNRLCCSGRKEICIVRFKPATSGDVCPYTLYYSYLNSRQRYGAVVLEQKSLKSIYLIPLPALQKIPSRLPPLSGPGLESSHSDLLLALTFPKKQYSSTTFRKPYECRSSTDRYLQENKYRQKCTENIKEHLSDHPSAKWGAQTSTLPMLPILPFTQPRVCKDKPSDLLSGNLLSSEEQSSSTDLANNFAVEIFQSSYGQDQVSHGIENMFGASAFLGEWANDGQSEDIVTNEQDNHWNDAGKESESMTKTKMFNIETNLLAHFKPADILTENFLLSETRLNSALLQEVEPKIEGNEPTNEQEADGAVSAQYTQDMQTYIKELDKLFTNVPVSTFSQHEDCNHLRSTISCCAEVLNHLLSAGDNSRVTELQIQMDPYGNRCNATASRESSEHIPQSDDPLPLHSAQTPNNFQHFGHSGIMTLEPSVHFPDLLANEVTMEQVEAPFQNGSTLSLQV
SIO_010081: LOC125465154
subclass of: SO_0000673
so part of: LOC125465154
location: complement(join(5445983..5447121,5458727..5458922,5465968..5466057,5468417..5468528,5486773..5486962,5489191..5489233))
location: region:5445983-5489233:-1
so has part: feature:5489191-5489233:-1:exon
so has part: feature:5486773-5486962:-1:exon
so has part: feature:5468417-5468528:-1:exon
so has part: feature:5465968-5466057:-1:exon
so has part: feature:5458727-5458922:-1:exon
so has part: feature:5445983-5447121:-1:exon

XP_048414314.1
type: Protein
SIO_000068: ncbiprotein

position:5445983:-1
position: 5445983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5489233:-1
position: 5489233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5489191-5489233:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5486773-5486962:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5468417-5468528:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5465968-5466057:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5458727-5458922:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5445983-5447121:-1:exon

LOC125465154
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465154
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PHD finger protein 3-like isoform X2
translation: MKRFLVKAYPVLGRTDHLTEALSTTITVGKCVLPEPIWDSVNRLCCSGRKEICIVRFKPATSGDVCPYTLYYSYLNSRQRYGAVVLEQKSLKSIYLIPLPALQKIPSRLPPLSGPGLESSHSDLLLALTFPKKQYSSTTFRKPYECRSSTDRYLQENKYRQKCTENIKEHLSDHPSAKWGAQTSTLPMLPILPFTQPRVCKDKPSDLLSGNLLSSEEQSSSTDLANNFAVEIFQSSYGQDQVSHGIENMFGASAFLGEWANDGQSEDIVTNEQDNHWNDAGKESESMTKTKMFNIETNLLAHFKPADILTENFLLSETRLNSALLQEVEPKIEGNEPTNEQEADGAVSAQYTQDMQTYIKELDKLFTNVPVSTFSQHEDCNHLRSTISCCAEVLNHLLSAGDNSRVTELQIQMDPYGNRCNATASRESSEHIPQSDDPLPLHSAQTPNNFQHFGHSGIMTLEPSVHFPDLLANEVTMEQVEAPFQNGSTLSLQV
SIO_010081: LOC125465154
subclass of: SO_0000673
so part of: LOC125465154
location: complement(join(5445983..5447121,5458727..5458922,5465968..5466057,5468417..5468476))
location: region:5445983-5468476:-1
so has part: feature:5468417-5468476:-1:exon
so has part: feature:5465968-5466057:-1:exon
so has part: feature:5458727-5458922:-1:exon
so has part: feature:5445983-5447121:-1:exon

XP_048414315.1
type: Protein
SIO_000068: ncbiprotein

position:5468476:-1
position: 5468476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5468417-5468476:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5465968-5466057:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5458727-5458922:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5445983-5447121:-1:exon

LOC125464991
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125464991
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5566515..5676105)
location: region:5566515-5676105:-1
so has part: feature:5566515-5676105:-1:exon
subclass of: SO_0000010

125464991
type: Gene
SIO_000068: ncbigene

position:5566515:-1
position: 5566515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5676105:-1
position: 5676105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5566515-5676105:-1:exon

LOC125464991
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125464991
product: protein tyrosine phosphatase type IVA 2-like, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558006.1
SIO_010081: LOC125464991
subclass of: SO_0000673
so part of: LOC125464991
location: complement(join(5566515..5567009,5569714..5569788,5572977..5573107,5594159..5594251,5603368..5603487,5603571..5603943,5675918..5676105))
location: region:5566515-5676105:-1
so has part: feature:5675918-5676105:-1:exon
so has part: feature:5603571-5603943:-1:exon
so has part: feature:5603368-5603487:-1:exon
so has part: feature:5594159-5594251:-1:exon
so has part: feature:5572977-5573107:-1:exon
so has part: feature:5569714-5569788:-1:exon
so has part: feature:5566515-5567009:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5675918-5676105:-1:exon

position:5675918:-1
position: 5675918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5603571-5603943:-1:exon

position:5603571:-1
position: 5603571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5603943:-1
position: 5603943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5603368-5603487:-1:exon

position:5603368:-1
position: 5603368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5603487:-1
position: 5603487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5594159-5594251:-1:exon

position:5594159:-1
position: 5594159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5594251:-1
position: 5594251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5572977-5573107:-1:exon

position:5572977:-1
position: 5572977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5573107:-1
position: 5573107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5569714-5569788:-1:exon

position:5569714:-1
position: 5569714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5569788:-1
position: 5569788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5566515-5567009:-1:exon

position:5567009:-1
position: 5567009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125464991
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125464991
product: protein tyrosine phosphatase type IVA 2-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558004.1
SIO_010081: LOC125464991
subclass of: SO_0000673
so part of: LOC125464991
location: complement(join(5566515..5567009,5569714..5569788,5572977..5573107,5594159..5594251,5603368..5603943,5675918..5676097))
location: region:5566515-5676097:-1
so has part: feature:5675918-5676097:-1:exon
so has part: feature:5603368-5603943:-1:exon
so has part: feature:5594159-5594251:-1:exon
so has part: feature:5572977-5573107:-1:exon
so has part: feature:5569714-5569788:-1:exon
so has part: feature:5566515-5567009:-1:exon

position:5676097:-1
position: 5676097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5675918-5676097:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5603368-5603943:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5594159-5594251:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5572977-5573107:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5569714-5569788:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5566515-5567009:-1:exon

LOC125464991
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125464991
product: protein tyrosine phosphatase type IVA 2-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558005.1
SIO_010081: LOC125464991
subclass of: SO_0000673
so part of: LOC125464991
location: complement(join(5566515..5567009,5569714..5569788,5572977..5573107,5594159..5594251,5603368..5603943,5605166..5605266))
location: region:5566515-5605266:-1
so has part: feature:5605166-5605266:-1:exon
so has part: feature:5603368-5603943:-1:exon
so has part: feature:5594159-5594251:-1:exon
so has part: feature:5572977-5573107:-1:exon
so has part: feature:5569714-5569788:-1:exon
so has part: feature:5566515-5567009:-1:exon

position:5605266:-1
position: 5605266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5605166-5605266:-1:exon

position:5605166:-1
position: 5605166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5603368-5603943:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5594159-5594251:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5572977-5573107:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5569714-5569788:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5566515-5567009:-1:exon

LOC125464991
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125464991
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein tyrosine phosphatase type IVA 2-like
translation: MNRPAPVEIISESMRFLITHNPTNATLNKFTEELKKYGVTTLVRVCEATYDKAPVEKEGIQVLDWPFDDGAPPPTQIVDDWLNLLRERFHDEPGCCIAVHCVAGLGRAPVLVALALIESGMKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKLRLRFRAANSTSCCIQ
SIO_010081: LOC125464991
subclass of: SO_0000673
so part of: LOC125464991
location: complement(join(5566898..5567009,5569714..5569788,5572977..5573107,5594159..5594251,5603368..5603463))
location: region:5566898-5603463:-1
so has part: feature:5603368-5603463:-1:exon
so has part: feature:5594159-5594251:-1:exon
so has part: feature:5572977-5573107:-1:exon
so has part: feature:5569714-5569788:-1:exon
so has part: feature:5566898-5567009:-1:exon

XP_048413961.1
type: Protein
SIO_000068: ncbiprotein

position:5566898:-1
position: 5566898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5603463:-1
position: 5603463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5603368-5603463:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5594159-5594251:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5572977-5573107:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5569714-5569788:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5566898-5567009:-1:exon

LOC125464991
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125464991
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein tyrosine phosphatase type IVA 2-like
translation: MNRPAPVEIISESMRFLITHNPTNATLNKFTEELKKYGVTTLVRVCEATYDKAPVEKEGIQVLDWPFDDGAPPPTQIVDDWLNLLRERFHDEPGCCIAVHCVAGLGRAPVLVALALIESGMKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKLRLRFRAANSTSCCIQ
SIO_010081: LOC125464991
subclass of: SO_0000673
so part of: LOC125464991
location: complement(join(5566898..5567009,5569714..5569788,5572977..5573107,5594159..5594251,5603368..5603463))
location: region:5566898-5603463:-1
so has part: feature:5603368-5603463:-1:exon
so has part: feature:5594159-5594251:-1:exon
so has part: feature:5572977-5573107:-1:exon
so has part: feature:5569714-5569788:-1:exon
so has part: feature:5566898-5567009:-1:exon

XP_048413962.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5603368-5603463:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5594159-5594251:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5572977-5573107:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5569714-5569788:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5566898-5567009:-1:exon

LOC125464991
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125464991
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein tyrosine phosphatase type IVA 2-like
translation: MNRPAPVEIISESMRFLITHNPTNATLNKFTEELKKYGVTTLVRVCEATYDKAPVEKEGIQVLDWPFDDGAPPPTQIVDDWLNLLRERFHDEPGCCIAVHCVAGLGRAPVLVALALIESGMKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKLRLRFRAANSTSCCIQ
SIO_010081: LOC125464991
subclass of: SO_0000673
so part of: LOC125464991
location: complement(join(5566898..5567009,5569714..5569788,5572977..5573107,5594159..5594251,5603368..5603463))
location: region:5566898-5603463:-1
so has part: feature:5603368-5603463:-1:exon
so has part: feature:5594159-5594251:-1:exon
so has part: feature:5572977-5573107:-1:exon
so has part: feature:5569714-5569788:-1:exon
so has part: feature:5566898-5567009:-1:exon

XP_048413963.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5603368-5603463:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5594159-5594251:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5572977-5573107:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5569714-5569788:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5566898-5567009:-1:exon

LOC125465084
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125465084
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5725069..5728117)
location: region:5725069-5728117:-1
so has part: feature:5725069-5728117:-1:exon
subclass of: SO_0000010

125465084
type: Gene
SIO_000068: ncbigene

position:5725069:-1
position: 5725069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5728117:-1
position: 5728117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5725069-5728117:-1:exon

LOC125465084
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465084
product: U7 snRNA-associated Sm-like protein LSm10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_048558191.1
SIO_010081: LOC125465084
subclass of: SO_0000673
so part of: LOC125465084
location: complement(join(5725069..5725816,5728038..5728117))
location: region:5725069-5728117:-1
so has part: feature:5728038-5728117:-1:exon
so has part: feature:5725069-5725816:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5728038-5728117:-1:exon

position:5728038:-1
position: 5728038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5725069-5725816:-1:exon

position:5725816:-1
position: 5725816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125465084
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465084
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U7 snRNA-associated Sm-like protein LSm10
translation: MALSHSIKERTIAENSLIILLQGIHNHVTTVELKDESSVRGRFVNVDAFMNIRLAEVIYTDRQGRVSNLDDFFVTGRNVRYVHIPDEIDIIETVQNQLQKIHRVRNFGGKDRGRREFPSRK
SIO_010081: LOC125465084
subclass of: SO_0000673
so part of: LOC125465084
location: complement(5725379..5725744)
location: region:5725379-5725744:-1
so has part: feature:5725379-5725744:-1:exon

XP_048414148.1
type: Protein
SIO_000068: ncbiprotein

position:5725379:-1
position: 5725379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5725744:-1
position: 5725744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5725379-5725744:-1:exon

oscp1b
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: oscp1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5734438..5782534)
location: region:5734438-5782534:-1
so has part: feature:5734438-5782534:-1:exon
subclass of: SO_0000010

125464820
type: Gene
SIO_000068: ncbigene

position:5734438:-1
position: 5734438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5782534:-1
position: 5782534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5734438-5782534:-1:exon

oscp1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: oscp1b
product: organic solute carrier partner 1b
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_048557635.1
SIO_010081: oscp1b
subclass of: SO_0000673
so part of: oscp1b
location: complement(join(5734438..5735336,5735848..5735911,5736513..5736652,5743736..5743805,5745850..5745978,5751100..5751203,5755490..5755570,5760490..5760657,5761122..5761276,5782166..5782534))
location: region:5734438-5782534:-1
so has part: feature:5782166-5782534:-1:exon
so has part: feature:5761122-5761276:-1:exon
so has part: feature:5760490-5760657:-1:exon
so has part: feature:5755490-5755570:-1:exon
so has part: feature:5751100-5751203:-1:exon
so has part: feature:5745850-5745978:-1:exon
so has part: feature:5743736-5743805:-1:exon
so has part: feature:5736513-5736652:-1:exon
so has part: feature:5735848-5735911:-1:exon
so has part: feature:5734438-5735336:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5782166-5782534:-1:exon

position:5782166:-1
position: 5782166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5761122-5761276:-1:exon

position:5761122:-1
position: 5761122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5761276:-1
position: 5761276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5760490-5760657:-1:exon

position:5760490:-1
position: 5760490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5760657:-1
position: 5760657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5755490-5755570:-1:exon

position:5755490:-1
position: 5755490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5755570:-1
position: 5755570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5751100-5751203:-1:exon

position:5751100:-1
position: 5751100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5751203:-1
position: 5751203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5745850-5745978:-1:exon

position:5745850:-1
position: 5745850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5745978:-1
position: 5745978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5743736-5743805:-1:exon

position:5743736:-1
position: 5743736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5743805:-1
position: 5743805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5736513-5736652:-1:exon

position:5736513:-1
position: 5736513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5736652:-1
position: 5736652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5735848-5735911:-1:exon

position:5735848:-1
position: 5735848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5735911:-1
position: 5735911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5734438-5735336:-1:exon

position:5735336:-1
position: 5735336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

oscp1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: oscp1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein OSCP1
translation: MSLRTLPLLFINLGGEMLYILDQRLRAQSIPSDKAKKVMNDIISTMFNKKFMEELFKSQELYSKKALRTVFDRLAHASIMRLNQASMDKLYDLMTMAFKYQILLCPRPKDILLVTFNHMDAVKEFIRDSPSILNQVDEIFRQLIETYSCLPAGEFQLIRQTLLVFFQDLHIRVSIFLKDKVQNSNGRFVLPISGPVPWGTEIPGLIKMFNYDGEEVKRATFPARGSYTSVLTEGSFDLFGDRVIKLGTNMYSISRPVETHMPGASKNSATRTKENTAPNPLAKEELNLLALLMGGLEIKKPMGIEPGFRLNLFGTDEEEDQAAAIRPPDLLEEVIEIQVSKDQQQHEELTRIMGEFHVQEQPRHSRSKGDDLLAMMDDL
SIO_010081: oscp1b
subclass of: SO_0000673
so part of: oscp1b
location: complement(join(5735220..5735336,5735848..5735911,5736513..5736652,5743736..5743805,5745850..5745978,5751100..5751203,5755490..5755570,5760490..5760657,5761122..5761276,5782166..5782277))
location: region:5735220-5782277:-1
so has part: feature:5782166-5782277:-1:exon
so has part: feature:5761122-5761276:-1:exon
so has part: feature:5760490-5760657:-1:exon
so has part: feature:5755490-5755570:-1:exon
so has part: feature:5751100-5751203:-1:exon
so has part: feature:5745850-5745978:-1:exon
so has part: feature:5743736-5743805:-1:exon
so has part: feature:5736513-5736652:-1:exon
so has part: feature:5735848-5735911:-1:exon
so has part: feature:5735220-5735336:-1:exon

XP_048413592.1
type: Protein
SIO_000068: ncbiprotein

position:5735220:-1
position: 5735220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5782277:-1
position: 5782277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5782166-5782277:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5761122-5761276:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5760490-5760657:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5755490-5755570:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5751100-5751203:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5745850-5745978:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5743736-5743805:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5736513-5736652:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5735848-5735911:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5735220-5735336:-1:exon

LOC125465076
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125465076
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5796463..5827078)
location: region:5796463-5827078:-1
so has part: feature:5796463-5827078:-1:exon
subclass of: SO_0000010

125465076
type: Gene
SIO_000068: ncbigene

position:5796463:-1
position: 5796463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5827078:-1
position: 5827078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5796463-5827078:-1:exon

LOC125465076
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465076
product: cornifelin homolog, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558170.1
SIO_010081: LOC125465076
subclass of: SO_0000673
so part of: LOC125465076
location: complement(join(5796463..5797104,5800212..5800348,5807164..5807321,5826895..5827078))
location: region:5796463-5827078:-1
so has part: feature:5826895-5827078:-1:exon
so has part: feature:5807164-5807321:-1:exon
so has part: feature:5800212-5800348:-1:exon
so has part: feature:5796463-5797104:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5826895-5827078:-1:exon

position:5826895:-1
position: 5826895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5807164-5807321:-1:exon

position:5807164:-1
position: 5807164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5807321:-1
position: 5807321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5800212-5800348:-1:exon

position:5800212:-1
position: 5800212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5800348:-1
position: 5800348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5796463-5797104:-1:exon

position:5797104:-1
position: 5797104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125465076
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465076
product: cornifelin homolog, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558171.1
SIO_010081: LOC125465076
subclass of: SO_0000673
so part of: LOC125465076
location: complement(join(5796463..5797104,5800212..5800348,5826640..5826814))
location: region:5796463-5826814:-1
so has part: feature:5826640-5826814:-1:exon
so has part: feature:5800212-5800348:-1:exon
so has part: feature:5796463-5797104:-1:exon

position:5826814:-1
position: 5826814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5826640-5826814:-1:exon

position:5826640:-1
position: 5826640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5800212-5800348:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5796463-5797104:-1:exon

LOC125465076
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465076
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cornifelin homolog isoform X1
translation: MQIRNMFHPLAPCTNCPFGLEEAPLLPSPSVPLLFSKSSVLLISIMASTTVIIQQPGSGIPAGNGQWSTGICNICDDMTVCCGGLFCPCFLACYLAGAYGESCCLGFLPGGMTALRTHMCVTYGIQGTICQDAMMTTCCGLFEICRMTREMRRRNH
SIO_010081: LOC125465076
subclass of: SO_0000673
so part of: LOC125465076
location: complement(join(5797012..5797104,5800212..5800348,5807164..5807321,5826895..5826977))
location: region:5797012-5826977:-1
so has part: feature:5826895-5826977:-1:exon
so has part: feature:5807164-5807321:-1:exon
so has part: feature:5800212-5800348:-1:exon
so has part: feature:5797012-5797104:-1:exon

XP_048414127.1
type: Protein
SIO_000068: ncbiprotein

position:5797012:-1
position: 5797012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5826977:-1
position: 5826977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5826895-5826977:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5807164-5807321:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5800212-5800348:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5797012-5797104:-1:exon

LOC125465076
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465076
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cornifelin homolog isoform X2
translation: MSCLIVPCETSRFHSHNLRYLDGLNVQSGIAPVSKGCGGLFCPCFLACYLAGAYGESCCLGFLPGGMTALRTHMCVTYGIQGTICQDAMMTTCCGLFEICRMTREMRRRNH
SIO_010081: LOC125465076
subclass of: SO_0000673
so part of: LOC125465076
location: complement(join(5797012..5797104,5800212..5800348,5826640..5826745))
location: region:5797012-5826745:-1
so has part: feature:5826640-5826745:-1:exon
so has part: feature:5800212-5800348:-1:exon
so has part: feature:5797012-5797104:-1:exon

XP_048414128.1
type: Protein
SIO_000068: ncbiprotein

position:5826745:-1
position: 5826745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5826640-5826745:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5800212-5800348:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5797012-5797104:-1:exon

si:ch211-1i11.3
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: si:ch211-1i11.3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5899024..6057818
location: region:5899024-6057818:1
so has part: feature:5899024-6057818:1:exon
subclass of: SO_0000010

125465034
type: Gene
SIO_000068: ncbigene

position:5899024:1
position: 5899024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6057818:1
position: 6057818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5899024-6057818:1:exon

si:ch211-1i11.3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: si:ch211-1i11.3
product: mitogen-activated protein kinase kinase kinase 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048558082.1
SIO_010081: si:ch211-1i11.3
subclass of: SO_0000673
so part of: si:ch211-1i11.3
location: join(5899024..5899422,5911483..5911622,5927505..5927692,5930831..5930999,5941782..5941888,5948177..5948347,5976629..5976741,5982966..5983125,5985112..5985265,5986203..5986310,5986907..5986956,5989225..5989320,5997112..5997196,5998769..5998902,6001955..6002082,6006474..6006610,6009406..6009511,6009661..6009818,6010617..6010785,6017847..6018012,6018648..6018813,6027146..6027328,6028616..6028721,6032392..6032635,6034770..6034882,6044740..6044840,6048656..6048732,6050195..6057818)
location: region:5899024-6057818:1
so has part: feature:5899024-5899422:1:exon
so has part: feature:5911483-5911622:1:exon
so has part: feature:5927505-5927692:1:exon
so has part: feature:5930831-5930999:1:exon
so has part: feature:5941782-5941888:1:exon
so has part: feature:5948177-5948347:1:exon
so has part: feature:5976629-5976741:1:exon
so has part: feature:5982966-5983125:1:exon
so has part: feature:5985112-5985265:1:exon
so has part: feature:5986203-5986310:1:exon
so has part: feature:5986907-5986956:1:exon
so has part: feature:5989225-5989320:1:exon
so has part: feature:5997112-5997196:1:exon
so has part: feature:5998769-5998902:1:exon
so has part: feature:6001955-6002082:1:exon
so has part: feature:6006474-6006610:1:exon
so has part: feature:6009406-6009511:1:exon
so has part: feature:6009661-6009818:1:exon
so has part: feature:6010617-6010785:1:exon
so has part: feature:6017847-6018012:1:exon
so has part: feature:6018648-6018813:1:exon
so has part: feature:6027146-6027328:1:exon
so has part: feature:6028616-6028721:1:exon
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so has part: feature:6034770-6034882:1:exon
so has part: feature:6044740-6044840:1:exon
so has part: feature:6048656-6048732:1:exon
so has part: feature:6050195-6057818:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5899024-5899422:1:exon

position:5899422:1
position: 5899422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5911483-5911622:1:exon

position:5911483:1
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position:5911622:1
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urn:…
SIO_000300: 3
SIO_000628: feature:5927505-5927692:1:exon

position:5927505:1
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position:5927692:1
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reference: sequence
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urn:…
SIO_000300: 4
SIO_000628: feature:5930831-5930999:1:exon

position:5930831:1
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reference: sequence
type: ForwardStrandPosition
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position:5930999:1
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urn:…
SIO_000300: 5
SIO_000628: feature:5941782-5941888:1:exon

position:5941782:1
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reference: sequence
type: ForwardStrandPosition
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position:5941888:1
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urn:…
SIO_000300: 6
SIO_000628: feature:5948177-5948347:1:exon

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reference: sequence
type: ForwardStrandPosition
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position:5948347:1
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urn:…
SIO_000300: 7
SIO_000628: feature:5976629-5976741:1:exon

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reference: sequence
type: ForwardStrandPosition
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position:5976741:1
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urn:…
SIO_000300: 8
SIO_000628: feature:5982966-5983125:1:exon

position:5982966:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5983125:1
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reference: sequence
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urn:…
SIO_000300: 9
SIO_000628: feature:5985112-5985265:1:exon

position:5985112:1
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reference: sequence
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position:5985265:1
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reference: sequence
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urn:…
SIO_000300: 10
SIO_000628: feature:5986203-5986310:1:exon

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reference: sequence
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urn:…
SIO_000300: 11
SIO_000628: feature:5986907-5986956:1:exon

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urn:…
SIO_000300: 12
SIO_000628: feature:5989225-5989320:1:exon

position:5989225:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 13
SIO_000628: feature:5997112-5997196:1:exon

position:5997112:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 14
SIO_000628: feature:5998769-5998902:1:exon

position:5998769:1
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reference: sequence
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position:5998902:1
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urn:…
SIO_000300: 15
SIO_000628: feature:6001955-6002082:1:exon

position:6001955:1
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reference: sequence
type: ForwardStrandPosition
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position:6002082:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 16
SIO_000628: feature:6006474-6006610:1:exon

position:6006474:1
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reference: sequence
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position:6006610:1
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type: ForwardStrandPosition
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urn:…
SIO_000300: 17
SIO_000628: feature:6009406-6009511:1:exon

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urn:…
SIO_000300: 18
SIO_000628: feature:6009661-6009818:1:exon

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urn:…
SIO_000300: 19
SIO_000628: feature:6010617-6010785:1:exon

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urn:…
SIO_000300: 20
SIO_000628: feature:6017847-6018012:1:exon

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urn:…
SIO_000300: 21
SIO_000628: feature:6018648-6018813:1:exon

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urn:…
SIO_000300: 22
SIO_000628: feature:6027146-6027328:1:exon

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reference: sequence
type: ForwardStrandPosition
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 23
SIO_000628: feature:6028616-6028721:1:exon

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reference: sequence
type: ForwardStrandPosition
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position:6028721:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 24
SIO_000628: feature:6032392-6032635:1:exon

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reference: sequence
type: ForwardStrandPosition
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reference: sequence
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urn:…
SIO_000300: 25
SIO_000628: feature:6034770-6034882:1:exon

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reference: sequence
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position:6034882:1
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reference: sequence
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urn:…
SIO_000300: 26
SIO_000628: feature:6044740-6044840:1:exon

position:6044740:1
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reference: sequence
type: ForwardStrandPosition
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position:6044840:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 27
SIO_000628: feature:6048656-6048732:1:exon

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reference: sequence
type: ForwardStrandPosition
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reference: sequence
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urn:…
SIO_000300: 28
SIO_000628: feature:6050195-6057818:1:exon

position:6050195:1
position: 6050195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

si:ch211-1i11.3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: si:ch211-1i11.3
product: mitogen-activated protein kinase kinase kinase 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_048558083.1
SIO_010081: si:ch211-1i11.3
subclass of: SO_0000673
so part of: si:ch211-1i11.3
location: join(5899024..5899422,5911483..5911622,5927505..5927692,5930831..5930999,5941782..5941888,5948177..5948347,5976629..5976741,5982966..5983125,5985112..5985265,5986203..5986310,5986907..5986956,5989225..5989320,5997112..5997196,5998769..5998902,6001955..6002082,6006474..6006610,6009406..6009511,6009661..6009818,6010617..6010785,6017847..6018012,6018648..6018813,6027146..6027328,6028616..6028721,6032392..6032635,6034770..6034882,6044740..6044840,6048656..6048732,6055167..6057818)
location: region:5899024-6057818:1
so has part: feature:5899024-5899422:1:exon
so has part: feature:5911483-5911622:1:exon
so has part: feature:5927505-5927692:1:exon
so has part: feature:5930831-5930999:1:exon
so has part: feature:5941782-5941888:1:exon
so has part: feature:5948177-5948347:1:exon
so has part: feature:5976629-5976741:1:exon
so has part: feature:5982966-5983125:1:exon
so has part: feature:5985112-5985265:1:exon
so has part: feature:5986203-5986310:1:exon
so has part: feature:5986907-5986956:1:exon
so has part: feature:5989225-5989320:1:exon
so has part: feature:5997112-5997196:1:exon
so has part: feature:5998769-5998902:1:exon
so has part: feature:6001955-6002082:1:exon
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so has part: feature:6009406-6009511:1:exon
so has part: feature:6009661-6009818:1:exon
so has part: feature:6010617-6010785:1:exon
so has part: feature:6017847-6018012:1:exon
so has part: feature:6018648-6018813:1:exon
so has part: feature:6027146-6027328:1:exon
so has part: feature:6028616-6028721:1:exon
so has part: feature:6032392-6032635:1:exon
so has part: feature:6034770-6034882:1:exon
so has part: feature:6044740-6044840:1:exon
so has part: feature:6048656-6048732:1:exon
so has part: feature:6055167-6057818:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5899024-5899422:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5911483-5911622:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5927505-5927692:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5930831-5930999:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5941782-5941888:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5948177-5948347:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5976629-5976741:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5982966-5983125:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5985112-5985265:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5986203-5986310:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5986907-5986956:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5989225-5989320:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5997112-5997196:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5998769-5998902:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6001955-6002082:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6006474-6006610:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6009406-6009511:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6009661-6009818:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6010617-6010785:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6017847-6018012:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6018648-6018813:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6027146-6027328:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:6028616-6028721:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:6032392-6032635:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:6034770-6034882:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:6044740-6044840:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:6048656-6048732:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:6055167-6057818:1:exon

position:6055167:1
position: 6055167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

si:ch211-1i11.3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: si:ch211-1i11.3
product: mitogen-activated protein kinase kinase kinase 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048558084.1
SIO_010081: si:ch211-1i11.3
subclass of: SO_0000673
so part of: si:ch211-1i11.3
location: join(5899024..5899422,5911483..5911622,5927505..5927692,5930831..5930999,5941782..5941888,5948177..5948347,5976629..5976741,5982966..5983125,5985112..5985265,5986203..5986310,5986907..5986956,5989225..5989320,5997112..5997196,5998769..5998902,6001955..6002082,6006474..6006610,6009406..6009511,6009661..6009818,6010617..6010785,6017847..6018012,6018648..6018813,6027146..6027328,6028616..6028721,6032248..6032358)
location: region:5899024-6032358:1
so has part: feature:5899024-5899422:1:exon
so has part: feature:5911483-5911622:1:exon
so has part: feature:5927505-5927692:1:exon
so has part: feature:5930831-5930999:1:exon
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so has part: feature:6009406-6009511:1:exon
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so has part: feature:6017847-6018012:1:exon
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so has part: feature:6027146-6027328:1:exon
so has part: feature:6028616-6028721:1:exon
so has part: feature:6032248-6032358:1:exon

position:6032358:1
position: 6032358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5899024-5899422:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5911483-5911622:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5927505-5927692:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5930831-5930999:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5941782-5941888:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5948177-5948347:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5976629-5976741:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5982966-5983125:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5985112-5985265:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5986203-5986310:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5986907-5986956:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5989225-5989320:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5997112-5997196:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5998769-5998902:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6001955-6002082:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6006474-6006610:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6009406-6009511:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6009661-6009818:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6010617-6010785:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6017847-6018012:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6018648-6018813:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6027146-6027328:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:6028616-6028721:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:6032248-6032358:1:exon

position:6032248:1
position: 6032248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

si:ch211-1i11.3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: si:ch211-1i11.3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase kinase kinase 5 isoform X2
translation: MSGSERLASGQRGSSRRSSAASSGGASDSPGDEPGSVSAGSYWQDPLAIDMSRRAVPAPRVRRALRAVYVINETVNPQSPDSLALKCLREACEDAHAVLETVPFGRLVLGETGTLDCFYNADVAVVEMSDPYCQPSLFYHLGVRESFSMTNNVVLCCDSNLTSLQSLQGCYGNYIFIPYIVTPSGKVFCCEASMMKCLTEMFQPHFNLEPLLMPLVDRLTKLLEETQINSCEYFRESIRNEIRKAREMYSGKELRQALARIQLQLDSVELLSADIVMNLLLSYRDIQDLDATIKLVETLQKLPTCNVAELPNIKFHYCFALNRRNQPGDRERALSVILPVVNTGKQISSDLYCLCGRIYKDIFISSDFTDYESRDKSCYWYGMAFEHEPTLHSGINVAVFLMAAGHKFDTSPELRKIGMKLSSLLGRKGSLEKMQFYWDVGFFLGASILFNDQTKIIQASEKLYRLNAPVWYLASAMETYLLYRRFKMDTSEQPLAKQDLVDFWMEFLLSICRDKAPTDKFLVLILEPTKVFQPTHLTVNSSDKDQAVSMWHVSPAEENGIHTWTFSAASIRGVSVSKCNERCCFLYVLHNFDDFQLYFPTELHCKRFCELLNSFSEESQLNADDALRVMDDLLEYKYEYTENGERLILGKGTYGIVYAGRDMNNQVRIAIKEIPERDNRYSQPLHEEIALHKHLKHRNIVQYMGSVSQDGYIKIFMEEVPGGSLSALLCSKWGPLKDNEATIIFYTRQILEGLKYLHENQIVHRDIKGDNVLINTYSGLLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKPADIWSLACTVIEMATGKPPFFELGEPQAAMFKVGMFKIHPEIPESMSPDAKAFLLRGFEPNPDKRAMAAELLKDPFLSRKKTKPTPKPGEFHHSLSVPALGYLKEVGESRQPLEFKLNSPFLSRSCSIPGPSAKSSSPKQEFLSVLEEQVDDFSAPSSPEENAGLFLLKKDSERRDALFKILTEDCETVVQNILEAQAQNSDSKLTSEHIRQLVTCLKDYIRTSDHKLIVKVLLNLQTELHFDKGGLNEIQIVIFSFQDAVIKLLRRNQIKPHWMFALDNIIRKAMQIALSMLIPESKPQSQGSFDEDTNEHSMDNIPGKWSGSESDVREREALELQMDGAGTSGVSTLSRSVSHDSQQNACPLIVQLSRLRAESNRLLEDLAEKEREFQQLLQLTIHQKDHSLKSLRKRSESSDVYSDFESAPVDSETEELTQWLLTSQVDQQTIDKIVANGYTLQDLLTDATRDDLKYSRIRGGMLCRLWAAISAHRKTKGKI
SIO_010081: si:ch211-1i11.3
subclass of: SO_0000673
so part of: si:ch211-1i11.3
location: join(5899059..5899422,5911483..5911622,5927505..5927692,5930831..5930999,5941782..5941888,5948177..5948347,5976629..5976741,5982966..5983125,5985112..5985265,5986203..5986310,5986907..5986956,5989225..5989320,5997112..5997196,5998769..5998902,6001955..6002082,6006474..6006610,6009406..6009511,6009661..6009818,6010617..6010785,6017847..6018012,6018648..6018813,6027146..6027328,6028616..6028721,6032392..6032635,6034770..6034882,6044740..6044840,6048656..6048732,6055167..6055233)
location: region:5899059-6055233:1
so has part: feature:5899059-5899422:1:exon
so has part: feature:5911483-5911622:1:exon
so has part: feature:5927505-5927692:1:exon
so has part: feature:5930831-5930999:1:exon
so has part: feature:5941782-5941888:1:exon
so has part: feature:5948177-5948347:1:exon
so has part: feature:5976629-5976741:1:exon
so has part: feature:5982966-5983125:1:exon
so has part: feature:5985112-5985265:1:exon
so has part: feature:5986203-5986310:1:exon
so has part: feature:5986907-5986956:1:exon
so has part: feature:5989225-5989320:1:exon
so has part: feature:5997112-5997196:1:exon
so has part: feature:5998769-5998902:1:exon
so has part: feature:6001955-6002082:1:exon
so has part: feature:6006474-6006610:1:exon
so has part: feature:6009406-6009511:1:exon
so has part: feature:6009661-6009818:1:exon
so has part: feature:6010617-6010785:1:exon
so has part: feature:6017847-6018012:1:exon
so has part: feature:6018648-6018813:1:exon
so has part: feature:6027146-6027328:1:exon
so has part: feature:6028616-6028721:1:exon
so has part: feature:6032392-6032635:1:exon
so has part: feature:6034770-6034882:1:exon
so has part: feature:6044740-6044840:1:exon
so has part: feature:6048656-6048732:1:exon
so has part: feature:6055167-6055233:1:exon

XP_048414040.1
type: Protein
SIO_000068: ncbiprotein

position:5899059:1
position: 5899059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6055233:1
position: 6055233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5899059-5899422:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5911483-5911622:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5927505-5927692:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5930831-5930999:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5941782-5941888:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5948177-5948347:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5976629-5976741:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5982966-5983125:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5985112-5985265:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5986203-5986310:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5986907-5986956:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5989225-5989320:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5997112-5997196:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5998769-5998902:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6001955-6002082:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6006474-6006610:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6009406-6009511:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6009661-6009818:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6010617-6010785:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6017847-6018012:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6018648-6018813:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6027146-6027328:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:6028616-6028721:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:6032392-6032635:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:6034770-6034882:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:6044740-6044840:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:6048656-6048732:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:6055167-6055233:1:exon

si:ch211-1i11.3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: si:ch211-1i11.3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase kinase kinase 5 isoform X1
translation: MSGSERLASGQRGSSRRSSAASSGGASDSPGDEPGSVSAGSYWQDPLAIDMSRRAVPAPRVRRALRAVYVINETVNPQSPDSLALKCLREACEDAHAVLETVPFGRLVLGETGTLDCFYNADVAVVEMSDPYCQPSLFYHLGVRESFSMTNNVVLCCDSNLTSLQSLQGCYGNYIFIPYIVTPSGKVFCCEASMMKCLTEMFQPHFNLEPLLMPLVDRLTKLLEETQINSCEYFRESIRNEIRKAREMYSGKELRQALARIQLQLDSVELLSADIVMNLLLSYRDIQDLDATIKLVETLQKLPTCNVAELPNIKFHYCFALNRRNQPGDRERALSVILPVVNTGKQISSDLYCLCGRIYKDIFISSDFTDYESRDKSCYWYGMAFEHEPTLHSGINVAVFLMAAGHKFDTSPELRKIGMKLSSLLGRKGSLEKMQFYWDVGFFLGASILFNDQTKIIQASEKLYRLNAPVWYLASAMETYLLYRRFKMDTSEQPLAKQDLVDFWMEFLLSICRDKAPTDKFLVLILEPTKVFQPTHLTVNSSDKDQAVSMWHVSPAEENGIHTWTFSAASIRGVSVSKCNERCCFLYVLHNFDDFQLYFPTELHCKRFCELLNSFSEESQLNADDALRVMDDLLEYKYEYTENGERLILGKGTYGIVYAGRDMNNQVRIAIKEIPERDNRYSQPLHEEIALHKHLKHRNIVQYMGSVSQDGYIKIFMEEVPGGSLSALLCSKWGPLKDNEATIIFYTRQILEGLKYLHENQIVHRDIKGDNVLINTYSGLLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKPADIWSLACTVIEMATGKPPFFELGEPQAAMFKVGMFKIHPEIPESMSPDAKAFLLRGFEPNPDKRAMAAELLKDPFLSRKKTKPTPKPGEFHHSLSVPALGYLKEVGESRQPLEFKLNSPFLSRSCSIPGPSAKSSSPKQEFLSVLEEQVDDFSAPSSPEENAGLFLLKKDSERRDALFKILTEDCETVVQNILEAQAQNSDSKLTSEHIRQLVTCLKDYIRTSDHKLIVKVLLNLQTELHFDKGGLNEIQIVIFSFQDAVIKLLRRNQIKPHWMFALDNIIRKAMQIALSMLIPESKPQSQGSFDEDTNEHSMDNIPGKWSGSESDVREREALELQMDGAGTSGVSTLSRSVSHDSQQNACPLIVQLSRLRAESNRLLEDLAEKEREFQQLLQLTIHQKDHSLKSLRKRSESSDVYSDFESAPVDSETEELTQWLLTSQVDQQTIDKIVANGYTLQDLLTDATRDDLKYSRIRCHLTPAPSVFLCIYFNCLTFAVFYFLCSHLTL
SIO_010081: si:ch211-1i11.3
subclass of: SO_0000673
so part of: si:ch211-1i11.3
location: join(5899059..5899422,5911483..5911622,5927505..5927692,5930831..5930999,5941782..5941888,5948177..5948347,5976629..5976741,5982966..5983125,5985112..5985265,5986203..5986310,5986907..5986956,5989225..5989320,5997112..5997196,5998769..5998902,6001955..6002082,6006474..6006610,6009406..6009511,6009661..6009818,6010617..6010785,6017847..6018012,6018648..6018813,6027146..6027328,6028616..6028721,6032392..6032635,6034770..6034882,6044740..6044840,6048656..6048732,6050195..6050294)
location: region:5899059-6050294:1
so has part: feature:5899059-5899422:1:exon
so has part: feature:5911483-5911622:1:exon
so has part: feature:5927505-5927692:1:exon
so has part: feature:5930831-5930999:1:exon
so has part: feature:5941782-5941888:1:exon
so has part: feature:5948177-5948347:1:exon
so has part: feature:5976629-5976741:1:exon
so has part: feature:5982966-5983125:1:exon
so has part: feature:5985112-5985265:1:exon
so has part: feature:5986203-5986310:1:exon
so has part: feature:5986907-5986956:1:exon
so has part: feature:5989225-5989320:1:exon
so has part: feature:5997112-5997196:1:exon
so has part: feature:5998769-5998902:1:exon
so has part: feature:6001955-6002082:1:exon
so has part: feature:6006474-6006610:1:exon
so has part: feature:6009406-6009511:1:exon
so has part: feature:6009661-6009818:1:exon
so has part: feature:6010617-6010785:1:exon
so has part: feature:6017847-6018012:1:exon
so has part: feature:6018648-6018813:1:exon
so has part: feature:6027146-6027328:1:exon
so has part: feature:6028616-6028721:1:exon
so has part: feature:6032392-6032635:1:exon
so has part: feature:6034770-6034882:1:exon
so has part: feature:6044740-6044840:1:exon
so has part: feature:6048656-6048732:1:exon
so has part: feature:6050195-6050294:1:exon

XP_048414039.1
type: Protein
SIO_000068: ncbiprotein

position:6050294:1
position: 6050294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5899059-5899422:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5911483-5911622:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5927505-5927692:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5930831-5930999:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5941782-5941888:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5948177-5948347:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5976629-5976741:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5982966-5983125:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5985112-5985265:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5986203-5986310:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5986907-5986956:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5989225-5989320:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5997112-5997196:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5998769-5998902:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6001955-6002082:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6006474-6006610:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6009406-6009511:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6009661-6009818:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6010617-6010785:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6017847-6018012:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6018648-6018813:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6027146-6027328:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:6028616-6028721:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:6032392-6032635:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:6034770-6034882:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:6044740-6044840:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:6048656-6048732:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:6050195-6050294:1:exon

si:ch211-1i11.3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: si:ch211-1i11.3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase kinase kinase 5 isoform X3
translation: MSGSERLASGQRGSSRRSSAASSGGASDSPGDEPGSVSAGSYWQDPLAIDMSRRAVPAPRVRRALRAVYVINETVNPQSPDSLALKCLREACEDAHAVLETVPFGRLVLGETGTLDCFYNADVAVVEMSDPYCQPSLFYHLGVRESFSMTNNVVLCCDSNLTSLQSLQGCYGNYIFIPYIVTPSGKVFCCEASMMKCLTEMFQPHFNLEPLLMPLVDRLTKLLEETQINSCEYFRESIRNEIRKAREMYSGKELRQALARIQLQLDSVELLSADIVMNLLLSYRDIQDLDATIKLVETLQKLPTCNVAELPNIKFHYCFALNRRNQPGDRERALSVILPVVNTGKQISSDLYCLCGRIYKDIFISSDFTDYESRDKSCYWYGMAFEHEPTLHSGINVAVFLMAAGHKFDTSPELRKIGMKLSSLLGRKGSLEKMQFYWDVGFFLGASILFNDQTKIIQASEKLYRLNAPVWYLASAMETYLLYRRFKMDTSEQPLAKQDLVDFWMEFLLSICRDKAPTDKFLVLILEPTKVFQPTHLTVNSSDKDQAVSMWHVSPAEENGIHTWTFSAASIRGVSVSKCNERCCFLYVLHNFDDFQLYFPTELHCKRFCELLNSFSEESQLNADDALRVMDDLLEYKYEYTENGERLILGKGTYGIVYAGRDMNNQVRIAIKEIPERDNRYSQPLHEEIALHKHLKHRNIVQYMGSVSQDGYIKIFMEEVPGGSLSALLCSKWGPLKDNEATIIFYTRQILEGLKYLHENQIVHRDIKGDNVLINTYSGLLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKPADIWSLACTVIEMATGKPPFFELGEPQAAMFKVGMFKIHPEIPESMSPDAKAFLLRGFEPNPDKRAMAAELLKDPFLSRKKTKPTPKPGEFHHSLSVPALGYLKEVGESRQPLEFKLNSPFLSRSCSIPGPSAKSSSPKQEFLSVLEEQVDDFSAPSSPEENAGLFLLKKDSERRDALFKILTEDCETVVQNILEAQAQNSDSKLTSEHIRQLVTCLKDYIRTSDHKLIVKVLLNLQTELHFDKGGLNEIQIVIFSFQDAVIKLLRRNQIKPHWMFALDNIIRKAMQIALSMLIPGI
SIO_010081: si:ch211-1i11.3
subclass of: SO_0000673
so part of: si:ch211-1i11.3
location: join(5899059..5899422,5911483..5911622,5927505..5927692,5930831..5930999,5941782..5941888,5948177..5948347,5976629..5976741,5982966..5983125,5985112..5985265,5986203..5986310,5986907..5986956,5989225..5989320,5997112..5997196,5998769..5998902,6001955..6002082,6006474..6006610,6009406..6009511,6009661..6009818,6010617..6010785,6017847..6018012,6018648..6018813,6027146..6027328,6028616..6028721,6032248..6032255)
location: region:5899059-6032255:1
so has part: feature:5899059-5899422:1:exon
so has part: feature:5911483-5911622:1:exon
so has part: feature:5927505-5927692:1:exon
so has part: feature:5930831-5930999:1:exon
so has part: feature:5941782-5941888:1:exon
so has part: feature:5948177-5948347:1:exon
so has part: feature:5976629-5976741:1:exon
so has part: feature:5982966-5983125:1:exon
so has part: feature:5985112-5985265:1:exon
so has part: feature:5986203-5986310:1:exon
so has part: feature:5986907-5986956:1:exon
so has part: feature:5989225-5989320:1:exon
so has part: feature:5997112-5997196:1:exon
so has part: feature:5998769-5998902:1:exon
so has part: feature:6001955-6002082:1:exon
so has part: feature:6006474-6006610:1:exon
so has part: feature:6009406-6009511:1:exon
so has part: feature:6009661-6009818:1:exon
so has part: feature:6010617-6010785:1:exon
so has part: feature:6017847-6018012:1:exon
so has part: feature:6018648-6018813:1:exon
so has part: feature:6027146-6027328:1:exon
so has part: feature:6028616-6028721:1:exon
so has part: feature:6032248-6032255:1:exon

XP_048414041.1
type: Protein
SIO_000068: ncbiprotein

position:6032255:1
position: 6032255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5899059-5899422:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5911483-5911622:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5927505-5927692:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5930831-5930999:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5941782-5941888:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5948177-5948347:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5976629-5976741:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5982966-5983125:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5985112-5985265:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5986203-5986310:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5986907-5986956:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5989225-5989320:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5997112-5997196:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5998769-5998902:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6001955-6002082:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6006474-6006610:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6009406-6009511:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6009661-6009818:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6010617-6010785:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6017847-6018012:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6018648-6018813:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6027146-6027328:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:6028616-6028721:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:6032248-6032255:1:exon

map7d1a
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: map7d1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6077729..6301821
location: region:6077729-6301821:1
so has part: feature:6077729-6301821:1:exon
subclass of: SO_0000010

125465038
type: Gene
SIO_000068: ncbigene

position:6077729:1
position: 6077729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6301821:1
position: 6301821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6077729-6301821:1:exon

map7d1a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: map7d1a
product: MAP7 domain containing 1a, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558091.1
SIO_010081: map7d1a
subclass of: SO_0000673
so part of: map7d1a
location: join(6077729..6078459,6200902..6201366,6209791..6209928,6224678..6224746,6236319..6236482,6238554..6238668,6262018..6262128,6264595..6264717,6265362..6265474,6269912..6270069,6272388..6272656,6278180..6278315,6278858..6279038,6281994..6282098,6284816..6284866,6288484..6288550,6293364..6293487,6299477..6299772,6301203..6301821)
location: region:6077729-6301821:1
so has part: feature:6077729-6078459:1:exon
so has part: feature:6200902-6201366:1:exon
so has part: feature:6209791-6209928:1:exon
so has part: feature:6224678-6224746:1:exon
so has part: feature:6236319-6236482:1:exon
so has part: feature:6238554-6238668:1:exon
so has part: feature:6262018-6262128:1:exon
so has part: feature:6264595-6264717:1:exon
so has part: feature:6265362-6265474:1:exon
so has part: feature:6269912-6270069:1:exon
so has part: feature:6272388-6272656:1:exon
so has part: feature:6278180-6278315:1:exon
so has part: feature:6278858-6279038:1:exon
so has part: feature:6281994-6282098:1:exon
so has part: feature:6284816-6284866:1:exon
so has part: feature:6288484-6288550:1:exon
so has part: feature:6293364-6293487:1:exon
so has part: feature:6299477-6299772:1:exon
so has part: feature:6301203-6301821:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6077729-6078459:1:exon

position:6078459:1
position: 6078459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6200902-6201366:1:exon

position:6200902:1
position: 6200902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6201366:1
position: 6201366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6209791-6209928:1:exon

position:6209791:1
position: 6209791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6209928:1
position: 6209928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6224678-6224746:1:exon

position:6224678:1
position: 6224678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6224746:1
position: 6224746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6236319-6236482:1:exon

position:6236319:1
position: 6236319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6236482:1
position: 6236482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6238554-6238668:1:exon

position:6238554:1
position: 6238554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6238668:1
position: 6238668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6262018-6262128:1:exon

position:6262018:1
position: 6262018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6262128:1
position: 6262128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6264595-6264717:1:exon

position:6264595:1
position: 6264595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6264717:1
position: 6264717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6265362-6265474:1:exon

position:6265362:1
position: 6265362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6265474:1
position: 6265474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6269912-6270069:1:exon

position:6269912:1
position: 6269912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6270069:1
position: 6270069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6272388-6272656:1:exon

position:6272388:1
position: 6272388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6272656:1
position: 6272656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6278180-6278315:1:exon

position:6278180:1
position: 6278180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6278315:1
position: 6278315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6278858-6279038:1:exon

position:6278858:1
position: 6278858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6279038:1
position: 6279038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6281994-6282098:1:exon

position:6281994:1
position: 6281994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6282098:1
position: 6282098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6284816-6284866:1:exon

position:6284816:1
position: 6284816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6284866:1
position: 6284866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6288484-6288550:1:exon

position:6288484:1
position: 6288484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6288550:1
position: 6288550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:6293364-6293487:1:exon

position:6293364:1
position: 6293364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6293487:1
position: 6293487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:6299477-6299772:1:exon

position:6299477:1
position: 6299477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6299772:1
position: 6299772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:6301203-6301821:1:exon

position:6301203:1
position: 6301203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

map7d1a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: map7d1a
product: MAP7 domain containing 1a, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558090.1
SIO_010081: map7d1a
subclass of: SO_0000673
so part of: map7d1a
location: join(6077730..6078459,6200902..6201366,6209791..6209928,6224678..6224746,6236319..6236482,6238554..6238668,6262018..6262128,6264595..6264717,6265332..6265474,6269912..6270069,6272388..6272656,6278180..6278315,6278858..6279038,6281994..6282098,6284816..6284866,6288484..6288550,6293364..6293487,6299477..6299772,6301203..6301821)
location: region:6077730-6301821:1
so has part: feature:6077730-6078459:1:exon
so has part: feature:6200902-6201366:1:exon
so has part: feature:6209791-6209928:1:exon
so has part: feature:6224678-6224746:1:exon
so has part: feature:6236319-6236482:1:exon
so has part: feature:6238554-6238668:1:exon
so has part: feature:6262018-6262128:1:exon
so has part: feature:6264595-6264717:1:exon
so has part: feature:6265332-6265474:1:exon
so has part: feature:6269912-6270069:1:exon
so has part: feature:6272388-6272656:1:exon
so has part: feature:6278180-6278315:1:exon
so has part: feature:6278858-6279038:1:exon
so has part: feature:6281994-6282098:1:exon
so has part: feature:6284816-6284866:1:exon
so has part: feature:6288484-6288550:1:exon
so has part: feature:6293364-6293487:1:exon
so has part: feature:6299477-6299772:1:exon
so has part: feature:6301203-6301821:1:exon

position:6077730:1
position: 6077730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6077730-6078459:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6200902-6201366:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6209791-6209928:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6224678-6224746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6236319-6236482:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6238554-6238668:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6262018-6262128:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6264595-6264717:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6265332-6265474:1:exon

position:6265332:1
position: 6265332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6269912-6270069:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6272388-6272656:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6278180-6278315:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6278858-6279038:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6281994-6282098:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6284816-6284866:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6288484-6288550:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6293364-6293487:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6299477-6299772:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6301203-6301821:1:exon

map7d1a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: map7d1a
product: MAP7 domain containing 1a, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558094.1
SIO_010081: map7d1a
subclass of: SO_0000673
so part of: map7d1a
location: join(6077730..6078459,6200902..6201366,6209791..6209928,6224678..6224746,6236319..6236482,6238554..6238668,6264595..6264717,6265332..6265474,6269912..6270069,6272388..6272656,6278180..6278315,6278858..6279038,6281994..6282098,6284816..6284866,6288484..6288550,6293364..6293487,6299477..6299772,6301203..6301821)
location: region:6077730-6301821:1
so has part: feature:6077730-6078459:1:exon
so has part: feature:6200902-6201366:1:exon
so has part: feature:6209791-6209928:1:exon
so has part: feature:6224678-6224746:1:exon
so has part: feature:6236319-6236482:1:exon
so has part: feature:6238554-6238668:1:exon
so has part: feature:6264595-6264717:1:exon
so has part: feature:6265332-6265474:1:exon
so has part: feature:6269912-6270069:1:exon
so has part: feature:6272388-6272656:1:exon
so has part: feature:6278180-6278315:1:exon
so has part: feature:6278858-6279038:1:exon
so has part: feature:6281994-6282098:1:exon
so has part: feature:6284816-6284866:1:exon
so has part: feature:6288484-6288550:1:exon
so has part: feature:6293364-6293487:1:exon
so has part: feature:6299477-6299772:1:exon
so has part: feature:6301203-6301821:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6077730-6078459:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6200902-6201366:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6209791-6209928:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6224678-6224746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6236319-6236482:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6238554-6238668:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6264595-6264717:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6265332-6265474:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6269912-6270069:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6272388-6272656:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6278180-6278315:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6278858-6279038:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6281994-6282098:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6284816-6284866:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6288484-6288550:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6293364-6293487:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6299477-6299772:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6301203-6301821:1:exon

map7d1a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: map7d1a
product: MAP7 domain containing 1a, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558096.1
SIO_010081: map7d1a
subclass of: SO_0000673
so part of: map7d1a
location: join(6077732..6078459,6200902..6201366,6224678..6224746,6236319..6236482,6238554..6238668,6262018..6262128,6264595..6264717,6265332..6265474,6269912..6270069,6272388..6272656,6278180..6278315,6278858..6279038,6281994..6282098,6284816..6284866,6288484..6288550,6293364..6293487,6299477..6299772,6301203..6301821)
location: region:6077732-6301821:1
so has part: feature:6077732-6078459:1:exon
so has part: feature:6200902-6201366:1:exon
so has part: feature:6224678-6224746:1:exon
so has part: feature:6236319-6236482:1:exon
so has part: feature:6238554-6238668:1:exon
so has part: feature:6262018-6262128:1:exon
so has part: feature:6264595-6264717:1:exon
so has part: feature:6265332-6265474:1:exon
so has part: feature:6269912-6270069:1:exon
so has part: feature:6272388-6272656:1:exon
so has part: feature:6278180-6278315:1:exon
so has part: feature:6278858-6279038:1:exon
so has part: feature:6281994-6282098:1:exon
so has part: feature:6284816-6284866:1:exon
so has part: feature:6288484-6288550:1:exon
so has part: feature:6293364-6293487:1:exon
so has part: feature:6299477-6299772:1:exon
so has part: feature:6301203-6301821:1:exon

position:6077732:1
position: 6077732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6077732-6078459:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6200902-6201366:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6224678-6224746:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6236319-6236482:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6238554-6238668:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6262018-6262128:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6264595-6264717:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6265332-6265474:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6269912-6270069:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6272388-6272656:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6278180-6278315:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6278858-6279038:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6281994-6282098:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6284816-6284866:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6288484-6288550:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6293364-6293487:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6299477-6299772:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6301203-6301821:1:exon

map7d1a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: map7d1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAP7 domain-containing protein 1a isoform X1
translation: MQHLGPGAAKQGKRLKRASVRHCLSTPSLRGLFTISEEEERCRDAAMRRLSAADIKIVAEKSPTNDVHGEKGPANDVHGEKGPANDVHGEKGPANDVQGVKGPANDVQGVKGPANDVQGVKGPANDEEGEKGPANDVQGEKGPAIDEEGEKGPANDEEGEKGPANDEKGEKSLGKEDEAEKGLAKDEPHPGPSRSTALGKSPRGKQVHLIEPFQMVKWHHCGSGVTCRPDWVRMADFFCKKPKEIQMNFMVIDGLKAEDRQRLARQRREERAKTLAAKKSIWLEREEKAKMLREKQMEDRRKRLEEQRLKIEKRRAILEERQRLKLQKNKERYEAVVQRSTKKTWAEIRQQRWSWAGALPHTLSVHKDRSNSCSLSAVNLPKHVDSMLNKRLSKSSATLWNSPSRTRRLQLSPWESSIVDRLMTPTLSFLARSRSVAVLMGNGRDTVVPLCPRSSSASPIAPSSGKTPHRCSNRWRAALSTPDMLGRHKTDLPLSESKKKEKKDKERENAKEKHALLNSGSMADKMMRKRQSLPIVRSKESVAREARLKNRSLPSSPRRRTLVTSSSPAVPLVPPTAGSSTTTRKSKARGENRKAKESCLKRKEEKDEEPKESSRPSSASSLKTKEIPVETPEPAHGSPAKTIAGTTDPEEAMRVLAEKRRLAREQREREEQERKEQEEKMRQMKEEIARRKAEERAQRMADALRLEEDRQKREEEQRLEEEECQQRAAEAEREEMERLQKQREEAEARAREEAEKQRLERERHFQKEEQERSERRKRLEQIMKRTRRSDCLDKKDDKKSTADGEPDDKETKAETKDAGPVGVQSEFRREAPGKYDARDSSVNTTNLPSQDRPLGELSVPPKEDGGGKEVVITNTARLNQQENGIGTKEVESRDFEEIIQLSNHTGCLKESVESNGEKTCLSSQTPDEIPVNPIMAFEEGSSFIKKTTGIQSQHVAEIL
SIO_010081: map7d1a
subclass of: SO_0000673
so part of: map7d1a
location: join(6078306..6078459,6200902..6201366,6209791..6209928,6224678..6224746,6236319..6236482,6238554..6238668,6262018..6262128,6264595..6264717,6265332..6265474,6269912..6270069,6272388..6272656,6278180..6278315,6278858..6279038,6281994..6282098,6284816..6284866,6288484..6288550,6293364..6293487,6299477..6299772,6301203..6301213)
location: region:6078306-6301213:1
so has part: feature:6078306-6078459:1:exon
so has part: feature:6200902-6201366:1:exon
so has part: feature:6209791-6209928:1:exon
so has part: feature:6224678-6224746:1:exon
so has part: feature:6236319-6236482:1:exon
so has part: feature:6238554-6238668:1:exon
so has part: feature:6262018-6262128:1:exon
so has part: feature:6264595-6264717:1:exon
so has part: feature:6265332-6265474:1:exon
so has part: feature:6269912-6270069:1:exon
so has part: feature:6272388-6272656:1:exon
so has part: feature:6278180-6278315:1:exon
so has part: feature:6278858-6279038:1:exon
so has part: feature:6281994-6282098:1:exon
so has part: feature:6284816-6284866:1:exon
so has part: feature:6288484-6288550:1:exon
so has part: feature:6293364-6293487:1:exon
so has part: feature:6299477-6299772:1:exon
so has part: feature:6301203-6301213:1:exon

XP_048414047.1
type: Protein
SIO_000068: ncbiprotein

position:6078306:1
position: 6078306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6301213:1
position: 6301213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6078306-6078459:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6200902-6201366:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6209791-6209928:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6224678-6224746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6236319-6236482:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6238554-6238668:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6262018-6262128:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6264595-6264717:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6265332-6265474:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6269912-6270069:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6272388-6272656:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6278180-6278315:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6278858-6279038:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6281994-6282098:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6284816-6284866:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6288484-6288550:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6293364-6293487:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6299477-6299772:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6301203-6301213:1:exon

map7d1a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: map7d1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAP7 domain-containing protein 1a isoform X2
translation: MQHLGPGAAKQGKRLKRASVRHCLSTPSLRGLFTISEEEERCRDAAMRRLSAADIKIVAEKSPTNDVHGEKGPANDVHGEKGPANDVHGEKGPANDVQGVKGPANDVQGVKGPANDVQGVKGPANDEEGEKGPANDVQGEKGPAIDEEGEKGPANDEEGEKGPANDEKGEKSLGKEDEAEKGLAKDEPHPGPSRSTALGKSPRGKQVHLIEPFQMVKWHHCGSGVTCRPDWVRMADFFCKKPKEIQMNFMVIDGLKAEDRQRLARQRREERAKTLAAKKSIWLEREEKAKMLREKQMEDRRKRLEEQRLKIEKRRAILEERQRLKLQKNKERYEAVVQRSTKKTWAEIRQQRWSWAGALPHTLSVHKDRSNSCSLSAVNLPKHVDSMLNKRLSKSSATLWNSPSRTRRLQLSPWESSIVDRLMTPTLSFLARSRSVAVLMGNGRDTASPIAPSSGKTPHRCSNRWRAALSTPDMLGRHKTDLPLSESKKKEKKDKERENAKEKHALLNSGSMADKMMRKRQSLPIVRSKESVAREARLKNRSLPSSPRRRTLVTSSSPAVPLVPPTAGSSTTTRKSKARGENRKAKESCLKRKEEKDEEPKESSRPSSASSLKTKEIPVETPEPAHGSPAKTIAGTTDPEEAMRVLAEKRRLAREQREREEQERKEQEEKMRQMKEEIARRKAEERAQRMADALRLEEDRQKREEEQRLEEEECQQRAAEAEREEMERLQKQREEAEARAREEAEKQRLERERHFQKEEQERSERRKRLEQIMKRTRRSDCLDKKDDKKSTADGEPDDKETKAETKDAGPVGVQSEFRREAPGKYDARDSSVNTTNLPSQDRPLGELSVPPKEDGGGKEVVITNTARLNQQENGIGTKEVESRDFEEIIQLSNHTGCLKESVESNGEKTCLSSQTPDEIPVNPIMAFEEGSSFIKKTTGIQSQHVAEIL
SIO_010081: map7d1a
subclass of: SO_0000673
so part of: map7d1a
location: join(6078306..6078459,6200902..6201366,6209791..6209928,6224678..6224746,6236319..6236482,6238554..6238668,6262018..6262128,6264595..6264717,6265362..6265474,6269912..6270069,6272388..6272656,6278180..6278315,6278858..6279038,6281994..6282098,6284816..6284866,6288484..6288550,6293364..6293487,6299477..6299772,6301203..6301213)
location: region:6078306-6301213:1
so has part: feature:6078306-6078459:1:exon
so has part: feature:6200902-6201366:1:exon
so has part: feature:6209791-6209928:1:exon
so has part: feature:6224678-6224746:1:exon
so has part: feature:6236319-6236482:1:exon
so has part: feature:6238554-6238668:1:exon
so has part: feature:6262018-6262128:1:exon
so has part: feature:6264595-6264717:1:exon
so has part: feature:6265362-6265474:1:exon
so has part: feature:6269912-6270069:1:exon
so has part: feature:6272388-6272656:1:exon
so has part: feature:6278180-6278315:1:exon
so has part: feature:6278858-6279038:1:exon
so has part: feature:6281994-6282098:1:exon
so has part: feature:6284816-6284866:1:exon
so has part: feature:6288484-6288550:1:exon
so has part: feature:6293364-6293487:1:exon
so has part: feature:6299477-6299772:1:exon
so has part: feature:6301203-6301213:1:exon

XP_048414048.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6078306-6078459:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6200902-6201366:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6209791-6209928:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6224678-6224746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6236319-6236482:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6238554-6238668:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6262018-6262128:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6264595-6264717:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6265362-6265474:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6269912-6270069:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6272388-6272656:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6278180-6278315:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6278858-6279038:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6281994-6282098:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6284816-6284866:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6288484-6288550:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6293364-6293487:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6299477-6299772:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6301203-6301213:1:exon

map7d1a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: map7d1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAP7 domain-containing protein 1a isoform X3
translation: MQHLGPGAAKQGKRLKRASVRHCLSTPSLRGLFTISEEEERCRDAAMRRLSAADIKIVAEKSPTNDVHGEKGPANDVHGEKGPANDVHGEKGPANDVQGVKGPANDVQGVKGPANDVQGVKGPANDEEGEKGPANDVQGEKGPAIDEEGEKGPANDEEGEKGPANDEKGEKSLGKEDEAEKGLAKDEPHPGPSRSTALGKSPRGKQVHLIEPFQMVKWHHCGSGVTCRPDWVRMADFFCKKPKEIQMNFMVIDGLKAEDRQRLARQRREERAKTLAAKKSIWLEREEKAKMLREKQMEDRRKRLEEQRLKIEKRRAILEERQRLKLQKNKERYEAVVQRSTKKTWAEIRQQRWSWAGALPHTLSVHKDTRRLQLSPWESSIVDRLMTPTLSFLARSRSVAVLMGNGRDTVVPLCPRSSSASPIAPSSGKTPHRCSNRWRAALSTPDMLGRHKTDLPLSESKKKEKKDKERENAKEKHALLNSGSMADKMMRKRQSLPIVRSKESVAREARLKNRSLPSSPRRRTLVTSSSPAVPLVPPTAGSSTTTRKSKARGENRKAKESCLKRKEEKDEEPKESSRPSSASSLKTKEIPVETPEPAHGSPAKTIAGTTDPEEAMRVLAEKRRLAREQREREEQERKEQEEKMRQMKEEIARRKAEERAQRMADALRLEEDRQKREEEQRLEEEECQQRAAEAEREEMERLQKQREEAEARAREEAEKQRLERERHFQKEEQERSERRKRLEQIMKRTRRSDCLDKKDDKKSTADGEPDDKETKAETKDAGPVGVQSEFRREAPGKYDARDSSVNTTNLPSQDRPLGELSVPPKEDGGGKEVVITNTARLNQQENGIGTKEVESRDFEEIIQLSNHTGCLKESVESNGEKTCLSSQTPDEIPVNPIMAFEEGSSFIKKTTGIQSQHVAEIL
SIO_010081: map7d1a
subclass of: SO_0000673
so part of: map7d1a
location: join(6078306..6078459,6200902..6201366,6209791..6209928,6224678..6224746,6236319..6236482,6238554..6238668,6264595..6264717,6265332..6265474,6269912..6270069,6272388..6272656,6278180..6278315,6278858..6279038,6281994..6282098,6284816..6284866,6288484..6288550,6293364..6293487,6299477..6299772,6301203..6301213)
location: region:6078306-6301213:1
so has part: feature:6078306-6078459:1:exon
so has part: feature:6200902-6201366:1:exon
so has part: feature:6209791-6209928:1:exon
so has part: feature:6224678-6224746:1:exon
so has part: feature:6236319-6236482:1:exon
so has part: feature:6238554-6238668:1:exon
so has part: feature:6264595-6264717:1:exon
so has part: feature:6265332-6265474:1:exon
so has part: feature:6269912-6270069:1:exon
so has part: feature:6272388-6272656:1:exon
so has part: feature:6278180-6278315:1:exon
so has part: feature:6278858-6279038:1:exon
so has part: feature:6281994-6282098:1:exon
so has part: feature:6284816-6284866:1:exon
so has part: feature:6288484-6288550:1:exon
so has part: feature:6293364-6293487:1:exon
so has part: feature:6299477-6299772:1:exon
so has part: feature:6301203-6301213:1:exon

XP_048414051.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6078306-6078459:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6200902-6201366:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6209791-6209928:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6224678-6224746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6236319-6236482:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6238554-6238668:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6264595-6264717:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6265332-6265474:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6269912-6270069:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6272388-6272656:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6278180-6278315:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6278858-6279038:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6281994-6282098:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6284816-6284866:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6288484-6288550:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6293364-6293487:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6299477-6299772:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6301203-6301213:1:exon

map7d1a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: map7d1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAP7 domain-containing protein 1a isoform X5
translation: MQHLGPGAAKQGKRLKRASVRHCLSTPSLRGLFTISEEEERCRDAAMRRLSAADIKIVAEKSPTNDVHGEKGPANDVHGEKGPANDVHGEKGPANDVQGVKGPANDVQGVKGPANDVQGVKGPANDEEGEKGPANDVQGEKGPAIDEEGEKGPANDEEGEKGPANDEKGEKSLGKEDEAEKGLAKDEPHPGPSRSTALGKSPRGKQDGLKAEDRQRLARQRREERAKTLAAKKSIWLEREEKAKMLREKQMEDRRKRLEEQRLKIEKRRAILEERQRLKLQKNKERYEAVVQRSTKKTWAEIRQQRWSWAGALPHTLSVHKDRSNSCSLSAVNLPKHVDSMLNKRLSKSSATLWNSPSRTRRLQLSPWESSIVDRLMTPTLSFLARSRSVAVLMGNGRDTVVPLCPRSSSASPIAPSSGKTPHRCSNRWRAALSTPDMLGRHKTDLPLSESKKKEKKDKERENAKEKHALLNSGSMADKMMRKRQSLPIVRSKESVAREARLKNRSLPSSPRRRTLVTSSSPAVPLVPPTAGSSTTTRKSKARGENRKAKESCLKRKEEKDEEPKESSRPSSASSLKTKEIPVETPEPAHGSPAKTIAGTTDPEEAMRVLAEKRRLAREQREREEQERKEQEEKMRQMKEEIARRKAEERAQRMADALRLEEDRQKREEEQRLEEEECQQRAAEAEREEMERLQKQREEAEARAREEAEKQRLERERHFQKEEQERSERRKRLEQIMKRTRRSDCLDKKDDKKSTADGEPDDKETKAETKDAGPVGVQSEFRREAPGKYDARDSSVNTTNLPSQDRPLGELSVPPKEDGGGKEVVITNTARLNQQENGIGTKEVESRDFEEIIQLSNHTGCLKESVESNGEKTCLSSQTPDEIPVNPIMAFEEGSSFIKKTTGIQSQHVAEIL
SIO_010081: map7d1a
subclass of: SO_0000673
so part of: map7d1a
location: join(6078306..6078459,6200902..6201366,6224678..6224746,6236319..6236482,6238554..6238668,6262018..6262128,6264595..6264717,6265332..6265474,6269912..6270069,6272388..6272656,6278180..6278315,6278858..6279038,6281994..6282098,6284816..6284866,6288484..6288550,6293364..6293487,6299477..6299772,6301203..6301213)
location: region:6078306-6301213:1
so has part: feature:6078306-6078459:1:exon
so has part: feature:6200902-6201366:1:exon
so has part: feature:6224678-6224746:1:exon
so has part: feature:6236319-6236482:1:exon
so has part: feature:6238554-6238668:1:exon
so has part: feature:6262018-6262128:1:exon
so has part: feature:6264595-6264717:1:exon
so has part: feature:6265332-6265474:1:exon
so has part: feature:6269912-6270069:1:exon
so has part: feature:6272388-6272656:1:exon
so has part: feature:6278180-6278315:1:exon
so has part: feature:6278858-6279038:1:exon
so has part: feature:6281994-6282098:1:exon
so has part: feature:6284816-6284866:1:exon
so has part: feature:6288484-6288550:1:exon
so has part: feature:6293364-6293487:1:exon
so has part: feature:6299477-6299772:1:exon
so has part: feature:6301203-6301213:1:exon

XP_048414053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6078306-6078459:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6200902-6201366:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6224678-6224746:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6236319-6236482:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6238554-6238668:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6262018-6262128:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6264595-6264717:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6265332-6265474:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6269912-6270069:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6272388-6272656:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6278180-6278315:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6278858-6279038:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6281994-6282098:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6284816-6284866:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6288484-6288550:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6293364-6293487:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6299477-6299772:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6301203-6301213:1:exon

map7d1a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: map7d1a
product: MAP7 domain containing 1a, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558095.1
SIO_010081: map7d1a
subclass of: SO_0000673
so part of: map7d1a
location: join(6141967..6142426,6200902..6201366,6209791..6209928,6224678..6224746,6236319..6236482,6238554..6238668,6262018..6262128,6264595..6264717,6265332..6265474,6269912..6270069,6272388..6272656,6278180..6278315,6278858..6279038,6281994..6282098,6284816..6284866,6288484..6288550,6293364..6293487,6299477..6299772,6301203..6301821)
location: region:6141967-6301821:1
so has part: feature:6141967-6142426:1:exon
so has part: feature:6200902-6201366:1:exon
so has part: feature:6209791-6209928:1:exon
so has part: feature:6224678-6224746:1:exon
so has part: feature:6236319-6236482:1:exon
so has part: feature:6238554-6238668:1:exon
so has part: feature:6262018-6262128:1:exon
so has part: feature:6264595-6264717:1:exon
so has part: feature:6265332-6265474:1:exon
so has part: feature:6269912-6270069:1:exon
so has part: feature:6272388-6272656:1:exon
so has part: feature:6278180-6278315:1:exon
so has part: feature:6278858-6279038:1:exon
so has part: feature:6281994-6282098:1:exon
so has part: feature:6284816-6284866:1:exon
so has part: feature:6288484-6288550:1:exon
so has part: feature:6293364-6293487:1:exon
so has part: feature:6299477-6299772:1:exon
so has part: feature:6301203-6301821:1:exon

position:6141967:1
position: 6141967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6141967-6142426:1:exon

position:6142426:1
position: 6142426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6200902-6201366:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6209791-6209928:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6224678-6224746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6236319-6236482:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6238554-6238668:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6262018-6262128:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6264595-6264717:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6265332-6265474:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6269912-6270069:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6272388-6272656:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6278180-6278315:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6278858-6279038:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6281994-6282098:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6284816-6284866:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6288484-6288550:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6293364-6293487:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6299477-6299772:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6301203-6301821:1:exon

map7d1a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: map7d1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAP7 domain-containing protein 1a isoform X4
translation: MENQQHASSPPQSADIKIVAEKSPTNDVHGEKGPANDVHGEKGPANDVHGEKGPANDVQGVKGPANDVQGVKGPANDVQGVKGPANDEEGEKGPANDVQGEKGPAIDEEGEKGPANDEEGEKGPANDEKGEKSLGKEDEAEKGLAKDEPHPGPSRSTALGKSPRGKQVHLIEPFQMVKWHHCGSGVTCRPDWVRMADFFCKKPKEIQMNFMVIDGLKAEDRQRLARQRREERAKTLAAKKSIWLEREEKAKMLREKQMEDRRKRLEEQRLKIEKRRAILEERQRLKLQKNKERYEAVVQRSTKKTWAEIRQQRWSWAGALPHTLSVHKDRSNSCSLSAVNLPKHVDSMLNKRLSKSSATLWNSPSRTRRLQLSPWESSIVDRLMTPTLSFLARSRSVAVLMGNGRDTVVPLCPRSSSASPIAPSSGKTPHRCSNRWRAALSTPDMLGRHKTDLPLSESKKKEKKDKERENAKEKHALLNSGSMADKMMRKRQSLPIVRSKESVAREARLKNRSLPSSPRRRTLVTSSSPAVPLVPPTAGSSTTTRKSKARGENRKAKESCLKRKEEKDEEPKESSRPSSASSLKTKEIPVETPEPAHGSPAKTIAGTTDPEEAMRVLAEKRRLAREQREREEQERKEQEEKMRQMKEEIARRKAEERAQRMADALRLEEDRQKREEEQRLEEEECQQRAAEAEREEMERLQKQREEAEARAREEAEKQRLERERHFQKEEQERSERRKRLEQIMKRTRRSDCLDKKDDKKSTADGEPDDKETKAETKDAGPVGVQSEFRREAPGKYDARDSSVNTTNLPSQDRPLGELSVPPKEDGGGKEVVITNTARLNQQENGIGTKEVESRDFEEIIQLSNHTGCLKESVESNGEKTCLSSQTPDEIPVNPIMAFEEGSSFIKKTTGIQSQHVAEIL
SIO_010081: map7d1a
subclass of: SO_0000673
so part of: map7d1a
location: join(6142390..6142426,6200902..6201366,6209791..6209928,6224678..6224746,6236319..6236482,6238554..6238668,6262018..6262128,6264595..6264717,6265332..6265474,6269912..6270069,6272388..6272656,6278180..6278315,6278858..6279038,6281994..6282098,6284816..6284866,6288484..6288550,6293364..6293487,6299477..6299772,6301203..6301213)
location: region:6142390-6301213:1
so has part: feature:6142390-6142426:1:exon
so has part: feature:6200902-6201366:1:exon
so has part: feature:6209791-6209928:1:exon
so has part: feature:6224678-6224746:1:exon
so has part: feature:6236319-6236482:1:exon
so has part: feature:6238554-6238668:1:exon
so has part: feature:6262018-6262128:1:exon
so has part: feature:6264595-6264717:1:exon
so has part: feature:6265332-6265474:1:exon
so has part: feature:6269912-6270069:1:exon
so has part: feature:6272388-6272656:1:exon
so has part: feature:6278180-6278315:1:exon
so has part: feature:6278858-6279038:1:exon
so has part: feature:6281994-6282098:1:exon
so has part: feature:6284816-6284866:1:exon
so has part: feature:6288484-6288550:1:exon
so has part: feature:6293364-6293487:1:exon
so has part: feature:6299477-6299772:1:exon
so has part: feature:6301203-6301213:1:exon

XP_048414052.1
type: Protein
SIO_000068: ncbiprotein

position:6142390:1
position: 6142390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6142390-6142426:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6200902-6201366:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6209791-6209928:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6224678-6224746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6236319-6236482:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6238554-6238668:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6262018-6262128:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6264595-6264717:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6265332-6265474:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6269912-6270069:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6272388-6272656:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6278180-6278315:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6278858-6279038:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6281994-6282098:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6284816-6284866:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6288484-6288550:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6293364-6293487:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6299477-6299772:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6301203-6301213:1:exon

LOC125464841
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125464841
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6453130..6567352
location: region:6453130-6567352:1
so has part: feature:6453130-6567352:1:exon
subclass of: SO_0000010

125464841
type: Gene
SIO_000068: ncbigene

position:6453130:1
position: 6453130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6567352:1
position: 6567352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6453130-6567352:1:exon

LOC125464841
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125464841
product: thyroid hormone receptor-associated protein 3-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048557664.1
SIO_010081: LOC125464841
subclass of: SO_0000673
so part of: LOC125464841
location: join(6453130..6453244,6463544..6463584,6532411..6532589,6546104..6547081,6549009..6549818,6551339..6551511,6553640..6553748,6555147..6555231,6559620..6559816,6561374..6561569,6562562..6562711,6564522..6567352)
location: region:6453130-6567352:1
so has part: feature:6453130-6453244:1:exon
so has part: feature:6463544-6463584:1:exon
so has part: feature:6532411-6532589:1:exon
so has part: feature:6546104-6547081:1:exon
so has part: feature:6549009-6549818:1:exon
so has part: feature:6551339-6551511:1:exon
so has part: feature:6553640-6553748:1:exon
so has part: feature:6555147-6555231:1:exon
so has part: feature:6559620-6559816:1:exon
so has part: feature:6561374-6561569:1:exon
so has part: feature:6562562-6562711:1:exon
so has part: feature:6564522-6567352:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6453130-6453244:1:exon

position:6453244:1
position: 6453244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6463544-6463584:1:exon

position:6463544:1
position: 6463544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6463584:1
position: 6463584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6532411-6532589:1:exon

position:6532411:1
position: 6532411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6532589:1
position: 6532589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6546104-6547081:1:exon

position:6546104:1
position: 6546104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6547081:1
position: 6547081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6549009-6549818:1:exon

position:6549009:1
position: 6549009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6549818:1
position: 6549818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6551339-6551511:1:exon

position:6551339:1
position: 6551339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6551511:1
position: 6551511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6553640-6553748:1:exon

position:6553640:1
position: 6553640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6553748:1
position: 6553748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6555147-6555231:1:exon

position:6555147:1
position: 6555147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6555231:1
position: 6555231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6559620-6559816:1:exon

position:6559620:1
position: 6559620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6559816:1
position: 6559816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6561374-6561569:1:exon

position:6561374:1
position: 6561374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6561569:1
position: 6561569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6562562-6562711:1:exon

position:6562562:1
position: 6562562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6562711:1
position: 6562711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6564522-6567352:1:exon

position:6564522:1
position: 6564522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125464841
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125464841
product: thyroid hormone receptor-associated protein 3-like, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048557670.1
SIO_010081: LOC125464841
subclass of: SO_0000673
so part of: LOC125464841
location: join(6453130..6453244,6463544..6463584,6532411..6532589,6546104..6547081,6549009..6549818,6551339..6551511,6553640..6553748,6555147..6555231,6559620..6559816,6561374..6561569,6564522..6567352)
location: region:6453130-6567352:1
so has part: feature:6453130-6453244:1:exon
so has part: feature:6463544-6463584:1:exon
so has part: feature:6532411-6532589:1:exon
so has part: feature:6546104-6547081:1:exon
so has part: feature:6549009-6549818:1:exon
so has part: feature:6551339-6551511:1:exon
so has part: feature:6553640-6553748:1:exon
so has part: feature:6555147-6555231:1:exon
so has part: feature:6559620-6559816:1:exon
so has part: feature:6561374-6561569:1:exon
so has part: feature:6564522-6567352:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6453130-6453244:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6463544-6463584:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6532411-6532589:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6546104-6547081:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6549009-6549818:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6551339-6551511:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6553640-6553748:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6555147-6555231:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6559620-6559816:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6561374-6561569:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6564522-6567352:1:exon

LOC125464841
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125464841
product: thyroid hormone receptor-associated protein 3-like, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048557669.1
SIO_010081: LOC125464841
subclass of: SO_0000673
so part of: LOC125464841
location: join(6453130..6453244,6463544..6463584,6532411..6532589,6546104..6547081,6549147..6549818,6551339..6551511,6553640..6553748,6555147..6555231,6559620..6559816,6561374..6561569,6562562..6562711,6564522..6567352)
location: region:6453130-6567352:1
so has part: feature:6453130-6453244:1:exon
so has part: feature:6463544-6463584:1:exon
so has part: feature:6532411-6532589:1:exon
so has part: feature:6546104-6547081:1:exon
so has part: feature:6549147-6549818:1:exon
so has part: feature:6551339-6551511:1:exon
so has part: feature:6553640-6553748:1:exon
so has part: feature:6555147-6555231:1:exon
so has part: feature:6559620-6559816:1:exon
so has part: feature:6561374-6561569:1:exon
so has part: feature:6562562-6562711:1:exon
so has part: feature:6564522-6567352:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6453130-6453244:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6463544-6463584:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6532411-6532589:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6546104-6547081:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6549147-6549818:1:exon

position:6549147:1
position: 6549147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6551339-6551511:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6553640-6553748:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6555147-6555231:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6559620-6559816:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6561374-6561569:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6562562-6562711:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6564522-6567352:1:exon

LOC125464841
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125464841
product: thyroid hormone receptor-associated protein 3-like, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048557666.1
SIO_010081: LOC125464841
subclass of: SO_0000673
so part of: LOC125464841
location: join(6453130..6453244,6463544..6463584,6532411..6532589,6546104..6547066,6549009..6549818,6551339..6551511,6553640..6553748,6555147..6555231,6559620..6559816,6561374..6561569,6562562..6562711,6564522..6567352)
location: region:6453130-6567352:1
so has part: feature:6453130-6453244:1:exon
so has part: feature:6463544-6463584:1:exon
so has part: feature:6532411-6532589:1:exon
so has part: feature:6546104-6547066:1:exon
so has part: feature:6549009-6549818:1:exon
so has part: feature:6551339-6551511:1:exon
so has part: feature:6553640-6553748:1:exon
so has part: feature:6555147-6555231:1:exon
so has part: feature:6559620-6559816:1:exon
so has part: feature:6561374-6561569:1:exon
so has part: feature:6562562-6562711:1:exon
so has part: feature:6564522-6567352:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6453130-6453244:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6463544-6463584:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6532411-6532589:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6546104-6547066:1:exon

position:6547066:1
position: 6547066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6549009-6549818:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6551339-6551511:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6553640-6553748:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6555147-6555231:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6559620-6559816:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6561374-6561569:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6562562-6562711:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6564522-6567352:1:exon

LOC125464841
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125464841
product: thyroid hormone receptor-associated protein 3-like, transcript variant X7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048557671.1
SIO_010081: LOC125464841
subclass of: SO_0000673
so part of: LOC125464841
location: join(6453130..6453244,6463544..6463584,6532411..6532589,6546104..6547066,6549147..6549818,6551339..6551511,6553640..6553748,6555147..6555231,6559620..6559816,6561374..6561569,6562562..6562711,6564522..6567352)
location: region:6453130-6567352:1
so has part: feature:6453130-6453244:1:exon
so has part: feature:6463544-6463584:1:exon
so has part: feature:6532411-6532589:1:exon
so has part: feature:6546104-6547066:1:exon
so has part: feature:6549147-6549818:1:exon
so has part: feature:6551339-6551511:1:exon
so has part: feature:6553640-6553748:1:exon
so has part: feature:6555147-6555231:1:exon
so has part: feature:6559620-6559816:1:exon
so has part: feature:6561374-6561569:1:exon
so has part: feature:6562562-6562711:1:exon
so has part: feature:6564522-6567352:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6453130-6453244:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6463544-6463584:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6532411-6532589:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6546104-6547066:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6549147-6549818:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6551339-6551511:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6553640-6553748:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6555147-6555231:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6559620-6559816:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6561374-6561569:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6562562-6562711:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6564522-6567352:1:exon

LOC125464841
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125464841
product: thyroid hormone receptor-associated protein 3-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048557665.1
SIO_010081: LOC125464841
subclass of: SO_0000673
so part of: LOC125464841
location: join(6453135..6453244,6532411..6532589,6546104..6547081,6549009..6549818,6551339..6551511,6553640..6553748,6555147..6555231,6559620..6559816,6561374..6561569,6562562..6562711,6564522..6567352)
location: region:6453135-6567352:1
so has part: feature:6453135-6453244:1:exon
so has part: feature:6532411-6532589:1:exon
so has part: feature:6546104-6547081:1:exon
so has part: feature:6549009-6549818:1:exon
so has part: feature:6551339-6551511:1:exon
so has part: feature:6553640-6553748:1:exon
so has part: feature:6555147-6555231:1:exon
so has part: feature:6559620-6559816:1:exon
so has part: feature:6561374-6561569:1:exon
so has part: feature:6562562-6562711:1:exon
so has part: feature:6564522-6567352:1:exon

position:6453135:1
position: 6453135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6453135-6453244:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6532411-6532589:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6546104-6547081:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6549009-6549818:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6551339-6551511:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6553640-6553748:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6555147-6555231:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6559620-6559816:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6561374-6561569:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6562562-6562711:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6564522-6567352:1:exon

LOC125464841
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125464841
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thyroid hormone receptor-associated protein 3-like isoform X1
translation: MSKATGSKSRSQSSHSRSRSRSRSRSFTRSRSRSRSRSHSRKRKYSPRSRSRSYSPQHNRERNYQREYQPREFRGHRGYRRPFIQRRGRGYYPRGNWNNRGGYGNYGNYNHYGNYRPNWHNYRSTYSPRRGRSRSRSPKRRSISPRSRSRSRYTDKSSSSRSGRSSSSRSRSSPHRSRSPSPKRRNKKTKSSQKEAAASKPPVQEGEDQQKRSSEDGQAGNGSSESPAGLAPKRSDSWKGLTAYDTSPKHPSPAPRSTVVLKTSPALHSSPSQQSPSLSGAARHASPHGSPGQMSPQSRSPTRPNASHQSPPSLSSTIRNVSRQAPANHSPPAPLTQGIAQKEEVRPGMSGLFVEQTAPTISSYLKRYVPRRFTEEQKAKVLMQDRVNGREKEQKGTDLEKEKGRDQASAHDRLSACSVVKTEFHVKNVPEKGSRSSQSPKRFKGGVAEEFEKISKAEMRHKFGYDEEEVEEHDKDYPAKNQKEYGYEDELKYRSKLIASKTQERYDEEDEEEEEDDDNDRPRKREEINFFKHITISKEKFREVEEVEEEEELMPEKFKKEERFLSKKPDGNRYREVSPVKALKYKAGRAESPPPPRKSSDSKEQEGVAAQEESTPVLKPTHRPTEVTLKMDSLQFGDDSLGSANVLTHERRLCRDLVHKPKKDQEFRSIFQHIQMAQSRRSPSELFAQHIVTLVHHVKEHYFKSAGVTLNERFTMYQRRTAEQEVPRQKSPEIHRRIDISPSALKKRMHFRDEIKSQKESSYKQGEGKLKDEPDDLRLDIEHRRKYKSKEGEHKKDSSKDSRDSSHSRERSKEKSGKIPKAYKESKKHRKRKKVRARTSSSSTSSSSSSPSHEGKDDQEEGVGREETSTGFNKARLGTREFTGPPTRGRARGIFQFRIRGRGYGRGAFPGPSNSSNPGNPTFQKRPREEDWDPEYTPKSKKYYLHDDREGDGDNYWANKRGRGTFQRGRGRFLYKKSNTSPKWTHDKYQGSGQEGVEEEEEEEEDDGQVGSIASQEEKKLGTMEQ
SIO_010081: LOC125464841
subclass of: SO_0000673
so part of: LOC125464841
location: join(6532453..6532589,6546104..6547081,6549009..6549818,6551339..6551511,6553640..6553748,6555147..6555231,6559620..6559816,6561374..6561569,6562562..6562711,6564522..6564767)
location: region:6532453-6564767:1
so has part: feature:6532453-6532589:1:exon
so has part: feature:6546104-6547081:1:exon
so has part: feature:6549009-6549818:1:exon
so has part: feature:6551339-6551511:1:exon
so has part: feature:6553640-6553748:1:exon
so has part: feature:6555147-6555231:1:exon
so has part: feature:6559620-6559816:1:exon
so has part: feature:6561374-6561569:1:exon
so has part: feature:6562562-6562711:1:exon
so has part: feature:6564522-6564767:1:exon

XP_048413621.1
type: Protein
SIO_000068: ncbiprotein

position:6532453:1
position: 6532453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6564767:1
position: 6564767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6532453-6532589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6546104-6547081:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6549009-6549818:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6551339-6551511:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6553640-6553748:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6555147-6555231:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6559620-6559816:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6561374-6561569:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6562562-6562711:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6564522-6564767:1:exon

LOC125464841
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125464841
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thyroid hormone receptor-associated protein 3-like isoform X1
translation: MSKATGSKSRSQSSHSRSRSRSRSRSFTRSRSRSRSRSHSRKRKYSPRSRSRSYSPQHNRERNYQREYQPREFRGHRGYRRPFIQRRGRGYYPRGNWNNRGGYGNYGNYNHYGNYRPNWHNYRSTYSPRRGRSRSRSPKRRSISPRSRSRSRYTDKSSSSRSGRSSSSRSRSSPHRSRSPSPKRRNKKTKSSQKEAAASKPPVQEGEDQQKRSSEDGQAGNGSSESPAGLAPKRSDSWKGLTAYDTSPKHPSPAPRSTVVLKTSPALHSSPSQQSPSLSGAARHASPHGSPGQMSPQSRSPTRPNASHQSPPSLSSTIRNVSRQAPANHSPPAPLTQGIAQKEEVRPGMSGLFVEQTAPTISSYLKRYVPRRFTEEQKAKVLMQDRVNGREKEQKGTDLEKEKGRDQASAHDRLSACSVVKTEFHVKNVPEKGSRSSQSPKRFKGGVAEEFEKISKAEMRHKFGYDEEEVEEHDKDYPAKNQKEYGYEDELKYRSKLIASKTQERYDEEDEEEEEDDDNDRPRKREEINFFKHITISKEKFREVEEVEEEEELMPEKFKKEERFLSKKPDGNRYREVSPVKALKYKAGRAESPPPPRKSSDSKEQEGVAAQEESTPVLKPTHRPTEVTLKMDSLQFGDDSLGSANVLTHERRLCRDLVHKPKKDQEFRSIFQHIQMAQSRRSPSELFAQHIVTLVHHVKEHYFKSAGVTLNERFTMYQRRTAEQEVPRQKSPEIHRRIDISPSALKKRMHFRDEIKSQKESSYKQGEGKLKDEPDDLRLDIEHRRKYKSKEGEHKKDSSKDSRDSSHSRERSKEKSGKIPKAYKESKKHRKRKKVRARTSSSSTSSSSSSPSHEGKDDQEEGVGREETSTGFNKARLGTREFTGPPTRGRARGIFQFRIRGRGYGRGAFPGPSNSSNPGNPTFQKRPREEDWDPEYTPKSKKYYLHDDREGDGDNYWANKRGRGTFQRGRGRFLYKKSNTSPKWTHDKYQGSGQEGVEEEEEEEEDDGQVGSIASQEEKKLGTMEQ
SIO_010081: LOC125464841
subclass of: SO_0000673
so part of: LOC125464841
location: join(6532453..6532589,6546104..6547081,6549009..6549818,6551339..6551511,6553640..6553748,6555147..6555231,6559620..6559816,6561374..6561569,6562562..6562711,6564522..6564767)
location: region:6532453-6564767:1
so has part: feature:6532453-6532589:1:exon
so has part: feature:6546104-6547081:1:exon
so has part: feature:6549009-6549818:1:exon
so has part: feature:6551339-6551511:1:exon
so has part: feature:6553640-6553748:1:exon
so has part: feature:6555147-6555231:1:exon
so has part: feature:6559620-6559816:1:exon
so has part: feature:6561374-6561569:1:exon
so has part: feature:6562562-6562711:1:exon
so has part: feature:6564522-6564767:1:exon

XP_048413622.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6532453-6532589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6546104-6547081:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6549009-6549818:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6551339-6551511:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6553640-6553748:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6555147-6555231:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6559620-6559816:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6561374-6561569:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6562562-6562711:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6564522-6564767:1:exon

LOC125464841
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125464841
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thyroid hormone receptor-associated protein 3-like isoform X5
translation: MSKATGSKSRSQSSHSRSRSRSRSRSFTRSRSRSRSRSHSRKRKYSPRSRSRSYSPQHNRERNYQREYQPREFRGHRGYRRPFIQRRGRGYYPRGNWNNRGGYGNYGNYNHYGNYRPNWHNYRSTYSPRRGRSRSRSPKRRSISPRSRSRSRYTDKSSSSRSGRSSSSRSRSSPHRSRSPSPKRRNKKTKSSQKEAAASKPPVQEGEDQQKRSSEDGQAGNGSSESPAGLAPKRSDSWKGLTAYDTSPKHPSPAPRSTVVLKTSPALHSSPSQQSPSLSGAARHASPHGSPGQMSPQSRSPTRPNASHQSPPSLSSTIRNVSRQAPANHSPPAPLTQGIAQKEEVRPGMSGLFVEQTAPTISSYLKRYVPRRFTEEQKAKVLMQDRVNGREKEQKGTDLEKEKGRDQASAHDRLSACSVVKTEFHVKNVPEKGSRSSQSPKRFKGGVAEEFEKISKAEMRHKFGYDEEEVEEHDKDYPAKNQKEYGYEDELKYRSKLIASKTQERYDEEDEEEEEDDDNDRPRKREEINFFKHITISKEKFREVEEVEEEEELMPEKFKKEERFLSKKPDGNRYREVSPVKALKYKAGRAESPPPPRKSSDSKEQEGVAAQEESTPVLKPTHRPTEVTLKMDSLQFGDDSLGSANVLTHERRLCRDLVHKPKKDQEFRSIFQHIQMAQSRRSPSELFAQHIVTLVHHVKEHYFKSAGVTLNERFTMYQRRTAEQEVPRQKSPEIHRRIDISPSALKKRMHFRDEIKSQKESSYKQGEGKLKDEPDDLRLDIEHRRKYKSKEGEHKKDSSKDSRDSSHSRERSKEKSGKIPKAYKESKKHRKRKKVRARTSSSSTSSSSSSPSHEGKDDQEEGVGREETSTGFNKARLGTREFTGPPTRGRARGIFHDDREGDGDNYWANKRGRGTFQRGRGRFLYKKSNTSPKWTHDKYQGSGQEGVEEEEEEEEDDGQVGSIASQEEKKLGTMEQ
SIO_010081: LOC125464841
subclass of: SO_0000673
so part of: LOC125464841
location: join(6532453..6532589,6546104..6547081,6549009..6549818,6551339..6551511,6553640..6553748,6555147..6555231,6559620..6559816,6561374..6561569,6564522..6564767)
location: region:6532453-6564767:1
so has part: feature:6532453-6532589:1:exon
so has part: feature:6546104-6547081:1:exon
so has part: feature:6549009-6549818:1:exon
so has part: feature:6551339-6551511:1:exon
so has part: feature:6553640-6553748:1:exon
so has part: feature:6555147-6555231:1:exon
so has part: feature:6559620-6559816:1:exon
so has part: feature:6561374-6561569:1:exon
so has part: feature:6564522-6564767:1:exon

XP_048413627.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6532453-6532589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6546104-6547081:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6549009-6549818:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6551339-6551511:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6553640-6553748:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6555147-6555231:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6559620-6559816:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6561374-6561569:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6564522-6564767:1:exon

LOC125464841
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125464841
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thyroid hormone receptor-associated protein 3-like isoform X4
translation: MSKATGSKSRSQSSHSRSRSRSRSRSFTRSRSRSRSRSHSRKRKYSPRSRSRSYSPQHNRERNYQREYQPREFRGHRGYRRPFIQRRGRGYYPRGNWNNRGGYGNYGNYNHYGNYRPNWHNYRSTYSPRRGRSRSRSPKRRSISPRSRSRSRYTDKSSSSRSGRSSSSRSRSSPHRSRSPSPKRRNKKTKSSQKEAAASKPPVQEGEDQQKRSSEDGQAGNGSSESPAGLAPKRSDSWKGLTAYDTSPKHPSPAPRSTVVLKTSPALHSSPSQQSPSLSGAARHASPHGSPGQMSPQSRSPTRPNASHQSPPSLSSTIRNVSRQAPANHSPPAPLTQGIAQKEEVRPGMSGLFVEQTAPTISSYLKRYVPRSVVKTEFHVKNVPEKGSRSSQSPKRFKGGVAEEFEKISKAEMRHKFGYDEEEVEEHDKDYPAKNQKEYGYEDELKYRSKLIASKTQERYDEEDEEEEEDDDNDRPRKREEINFFKHITISKEKFREVEEVEEEEELMPEKFKKEERFLSKKPDGNRYREVSPVKALKYKAGRAESPPPPRKSSDSKEQEGVAAQEESTPVLKPTHRPTEVTLKMDSLQFGDDSLGSANVLTHERRLCRDLVHKPKKDQEFRSIFQHIQMAQSRRSPSELFAQHIVTLVHHVKEHYFKSAGVTLNERFTMYQRRTAEQEVPRQKSPEIHRRIDISPSALKKRMHFRDEIKSQKESSYKQGEGKLKDEPDDLRLDIEHRRKYKSKEGEHKKDSSKDSRDSSHSRERSKEKSGKIPKAYKESKKHRKRKKVRARTSSSSTSSSSSSPSHEGKDDQEEGVGREETSTGFNKARLGTREFTGPPTRGRARGIFQFRIRGRGYGRGAFPGPSNSSNPGNPTFQKRPREEDWDPEYTPKSKKYYLHDDREGDGDNYWANKRGRGTFQRGRGRFLYKKSNTSPKWTHDKYQGSGQEGVEEEEEEEEDDGQVGSIASQEEKKLGTMEQ
SIO_010081: LOC125464841
subclass of: SO_0000673
so part of: LOC125464841
location: join(6532453..6532589,6546104..6547081,6549147..6549818,6551339..6551511,6553640..6553748,6555147..6555231,6559620..6559816,6561374..6561569,6562562..6562711,6564522..6564767)
location: region:6532453-6564767:1
so has part: feature:6532453-6532589:1:exon
so has part: feature:6546104-6547081:1:exon
so has part: feature:6549147-6549818:1:exon
so has part: feature:6551339-6551511:1:exon
so has part: feature:6553640-6553748:1:exon
so has part: feature:6555147-6555231:1:exon
so has part: feature:6559620-6559816:1:exon
so has part: feature:6561374-6561569:1:exon
so has part: feature:6562562-6562711:1:exon
so has part: feature:6564522-6564767:1:exon

XP_048413626.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6532453-6532589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6546104-6547081:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6549147-6549818:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6551339-6551511:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6553640-6553748:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6555147-6555231:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6559620-6559816:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6561374-6561569:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6562562-6562711:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6564522-6564767:1:exon

LOC125464841
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125464841
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thyroid hormone receptor-associated protein 3-like isoform X2
translation: MSKATGSKSRSQSSHSRSRSRSRSRSFTRSRSRSRSRSHSRKRKYSPRSRSRSYSPQHNRERNYQREYQPREFRGHRGYRRPFIQRRGRGYYPRGNWNNRGGYGNYGNYNHYGNYRPNWHNYRSTYSPRRGRSRSRSPKRRSISPRSRSRSRYTDKSSSSRSGRSSSSRSRSSPHRSRSPSPKRRNKKTKSSQKEAAASKPPVQEGEDQQKRSSEDGQAGNGSSESPAGLAPKRSDSWKGLTAYDTSPKHPSPAPRSTVVLKTSPALHSSPSQQSPSLSGAARHASPHGSPGQMSPQSRSPTRPNASHQSPPSLSSTIRNVSRQAPANHSPPAPLTQGIAQKEEVRPGMSGLFVEQTAPTISSYLKRFTEEQKAKVLMQDRVNGREKEQKGTDLEKEKGRDQASAHDRLSACSVVKTEFHVKNVPEKGSRSSQSPKRFKGGVAEEFEKISKAEMRHKFGYDEEEVEEHDKDYPAKNQKEYGYEDELKYRSKLIASKTQERYDEEDEEEEEDDDNDRPRKREEINFFKHITISKEKFREVEEVEEEEELMPEKFKKEERFLSKKPDGNRYREVSPVKALKYKAGRAESPPPPRKSSDSKEQEGVAAQEESTPVLKPTHRPTEVTLKMDSLQFGDDSLGSANVLTHERRLCRDLVHKPKKDQEFRSIFQHIQMAQSRRSPSELFAQHIVTLVHHVKEHYFKSAGVTLNERFTMYQRRTAEQEVPRQKSPEIHRRIDISPSALKKRMHFRDEIKSQKESSYKQGEGKLKDEPDDLRLDIEHRRKYKSKEGEHKKDSSKDSRDSSHSRERSKEKSGKIPKAYKESKKHRKRKKVRARTSSSSTSSSSSSPSHEGKDDQEEGVGREETSTGFNKARLGTREFTGPPTRGRARGIFQFRIRGRGYGRGAFPGPSNSSNPGNPTFQKRPREEDWDPEYTPKSKKYYLHDDREGDGDNYWANKRGRGTFQRGRGRFLYKKSNTSPKWTHDKYQGSGQEGVEEEEEEEEDDGQVGSIASQEEKKLGTMEQ
SIO_010081: LOC125464841
subclass of: SO_0000673
so part of: LOC125464841
location: join(6532453..6532589,6546104..6547066,6549009..6549818,6551339..6551511,6553640..6553748,6555147..6555231,6559620..6559816,6561374..6561569,6562562..6562711,6564522..6564767)
location: region:6532453-6564767:1
so has part: feature:6532453-6532589:1:exon
so has part: feature:6546104-6547066:1:exon
so has part: feature:6549009-6549818:1:exon
so has part: feature:6551339-6551511:1:exon
so has part: feature:6553640-6553748:1:exon
so has part: feature:6555147-6555231:1:exon
so has part: feature:6559620-6559816:1:exon
so has part: feature:6561374-6561569:1:exon
so has part: feature:6562562-6562711:1:exon
so has part: feature:6564522-6564767:1:exon

XP_048413623.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6532453-6532589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6546104-6547066:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6549009-6549818:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6551339-6551511:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6553640-6553748:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6555147-6555231:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6559620-6559816:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6561374-6561569:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6562562-6562711:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6564522-6564767:1:exon

LOC125464841
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125464841
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thyroid hormone receptor-associated protein 3-like isoform X6
translation: MSKATGSKSRSQSSHSRSRSRSRSRSFTRSRSRSRSRSHSRKRKYSPRSRSRSYSPQHNRERNYQREYQPREFRGHRGYRRPFIQRRGRGYYPRGNWNNRGGYGNYGNYNHYGNYRPNWHNYRSTYSPRRGRSRSRSPKRRSISPRSRSRSRYTDKSSSSRSGRSSSSRSRSSPHRSRSPSPKRRNKKTKSSQKEAAASKPPVQEGEDQQKRSSEDGQAGNGSSESPAGLAPKRSDSWKGLTAYDTSPKHPSPAPRSTVVLKTSPALHSSPSQQSPSLSGAARHASPHGSPGQMSPQSRSPTRPNASHQSPPSLSSTIRNVSRQAPANHSPPAPLTQGIAQKEEVRPGMSGLFVEQTAPTISSYLKSVVKTEFHVKNVPEKGSRSSQSPKRFKGGVAEEFEKISKAEMRHKFGYDEEEVEEHDKDYPAKNQKEYGYEDELKYRSKLIASKTQERYDEEDEEEEEDDDNDRPRKREEINFFKHITISKEKFREVEEVEEEEELMPEKFKKEERFLSKKPDGNRYREVSPVKALKYKAGRAESPPPPRKSSDSKEQEGVAAQEESTPVLKPTHRPTEVTLKMDSLQFGDDSLGSANVLTHERRLCRDLVHKPKKDQEFRSIFQHIQMAQSRRSPSELFAQHIVTLVHHVKEHYFKSAGVTLNERFTMYQRRTAEQEVPRQKSPEIHRRIDISPSALKKRMHFRDEIKSQKESSYKQGEGKLKDEPDDLRLDIEHRRKYKSKEGEHKKDSSKDSRDSSHSRERSKEKSGKIPKAYKESKKHRKRKKVRARTSSSSTSSSSSSPSHEGKDDQEEGVGREETSTGFNKARLGTREFTGPPTRGRARGIFQFRIRGRGYGRGAFPGPSNSSNPGNPTFQKRPREEDWDPEYTPKSKKYYLHDDREGDGDNYWANKRGRGTFQRGRGRFLYKKSNTSPKWTHDKYQGSGQEGVEEEEEEEEDDGQVGSIASQEEKKLGTMEQ
SIO_010081: LOC125464841
subclass of: SO_0000673
so part of: LOC125464841
location: join(6532453..6532589,6546104..6547066,6549147..6549818,6551339..6551511,6553640..6553748,6555147..6555231,6559620..6559816,6561374..6561569,6562562..6562711,6564522..6564767)
location: region:6532453-6564767:1
so has part: feature:6532453-6532589:1:exon
so has part: feature:6546104-6547066:1:exon
so has part: feature:6549147-6549818:1:exon
so has part: feature:6551339-6551511:1:exon
so has part: feature:6553640-6553748:1:exon
so has part: feature:6555147-6555231:1:exon
so has part: feature:6559620-6559816:1:exon
so has part: feature:6561374-6561569:1:exon
so has part: feature:6562562-6562711:1:exon
so has part: feature:6564522-6564767:1:exon

XP_048413628.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6532453-6532589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6546104-6547066:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6549147-6549818:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6551339-6551511:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6553640-6553748:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6555147-6555231:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6559620-6559816:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6561374-6561569:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6562562-6562711:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6564522-6564767:1:exon

LOC125464841
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125464841
product: thyroid hormone receptor-associated protein 3-like, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048557668.1
SIO_010081: LOC125464841
subclass of: SO_0000673
so part of: LOC125464841
location: join(6538628..6538962,6546104..6547081,6549009..6549818,6551339..6551511,6553640..6553748,6555147..6555231,6559620..6559816,6561374..6561569,6562562..6562711,6564522..6567352)
location: region:6538628-6567352:1
so has part: feature:6538628-6538962:1:exon
so has part: feature:6546104-6547081:1:exon
so has part: feature:6549009-6549818:1:exon
so has part: feature:6551339-6551511:1:exon
so has part: feature:6553640-6553748:1:exon
so has part: feature:6555147-6555231:1:exon
so has part: feature:6559620-6559816:1:exon
so has part: feature:6561374-6561569:1:exon
so has part: feature:6562562-6562711:1:exon
so has part: feature:6564522-6567352:1:exon

position:6538628:1
position: 6538628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6538628-6538962:1:exon

position:6538962:1
position: 6538962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6546104-6547081:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6549009-6549818:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6551339-6551511:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6553640-6553748:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6555147-6555231:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6559620-6559816:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6561374-6561569:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6562562-6562711:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6564522-6567352:1:exon

LOC125464841
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125464841
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thyroid hormone receptor-associated protein 3-like isoform X3
translation: MKSYAGPRSRSRSYSPQHNRERNYQREYQPREFRGHRGYRRPFIQRRGRGYYPRGNWNNRGGYGNYGNYNHYGNYRPNWHNYRSTYSPRRGRSRSRSPKRRSISPRSRSRSRYTDKSSSSRSGRSSSSRSRSSPHRSRSPSPKRRNKKTKSSQKEAAASKPPVQEGEDQQKRSSEDGQAGNGSSESPAGLAPKRSDSWKGLTAYDTSPKHPSPAPRSTVVLKTSPALHSSPSQQSPSLSGAARHASPHGSPGQMSPQSRSPTRPNASHQSPPSLSSTIRNVSRQAPANHSPPAPLTQGIAQKEEVRPGMSGLFVEQTAPTISSYLKRYVPRRFTEEQKAKVLMQDRVNGREKEQKGTDLEKEKGRDQASAHDRLSACSVVKTEFHVKNVPEKGSRSSQSPKRFKGGVAEEFEKISKAEMRHKFGYDEEEVEEHDKDYPAKNQKEYGYEDELKYRSKLIASKTQERYDEEDEEEEEDDDNDRPRKREEINFFKHITISKEKFREVEEVEEEEELMPEKFKKEERFLSKKPDGNRYREVSPVKALKYKAGRAESPPPPRKSSDSKEQEGVAAQEESTPVLKPTHRPTEVTLKMDSLQFGDDSLGSANVLTHERRLCRDLVHKPKKDQEFRSIFQHIQMAQSRRSPSELFAQHIVTLVHHVKEHYFKSAGVTLNERFTMYQRRTAEQEVPRQKSPEIHRRIDISPSALKKRMHFRDEIKSQKESSYKQGEGKLKDEPDDLRLDIEHRRKYKSKEGEHKKDSSKDSRDSSHSRERSKEKSGKIPKAYKESKKHRKRKKVRARTSSSSTSSSSSSPSHEGKDDQEEGVGREETSTGFNKARLGTREFTGPPTRGRARGIFQFRIRGRGYGRGAFPGPSNSSNPGNPTFQKRPREEDWDPEYTPKSKKYYLHDDREGDGDNYWANKRGRGTFQRGRGRFLYKKSNTSPKWTHDKYQGSGQEGVEEEEEEEEDDGQVGSIASQEEKKLGTMEQ
SIO_010081: LOC125464841
subclass of: SO_0000673
so part of: LOC125464841
location: join(6538946..6538962,6546104..6547081,6549009..6549818,6551339..6551511,6553640..6553748,6555147..6555231,6559620..6559816,6561374..6561569,6562562..6562711,6564522..6564767)
location: region:6538946-6564767:1
so has part: feature:6538946-6538962:1:exon
so has part: feature:6546104-6547081:1:exon
so has part: feature:6549009-6549818:1:exon
so has part: feature:6551339-6551511:1:exon
so has part: feature:6553640-6553748:1:exon
so has part: feature:6555147-6555231:1:exon
so has part: feature:6559620-6559816:1:exon
so has part: feature:6561374-6561569:1:exon
so has part: feature:6562562-6562711:1:exon
so has part: feature:6564522-6564767:1:exon

XP_048413625.1
type: Protein
SIO_000068: ncbiprotein

position:6538946:1
position: 6538946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6538946-6538962:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6546104-6547081:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6549009-6549818:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6551339-6551511:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6553640-6553748:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6555147-6555231:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6559620-6559816:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6561374-6561569:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6562562-6562711:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6564522-6564767:1:exon

sh3d21
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: sh3d21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6581690..6692409
location: region:6581690-6692409:1
so has part: feature:6581690-6692409:1:exon
subclass of: SO_0000010

125465115
type: Gene
SIO_000068: ncbigene

position:6581690:1
position: 6581690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6692409:1
position: 6692409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6581690-6692409:1:exon

sh3d21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: sh3d21
product: SH3 domain containing 21
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048558265.1
SIO_010081: sh3d21
subclass of: SO_0000673
so part of: sh3d21
location: join(6581690..6581811,6587023..6587183,6601786..6601846,6624294..6624409,6629032..6629149,6630614..6630657,6632971..6633040,6638933..6639021,6641602..6641697,6648575..6648620,6667753..6667867,6679304..6679374,6682437..6682552,6688180..6688430,6689619..6689682,6691994..6692409)
location: region:6581690-6692409:1
so has part: feature:6581690-6581811:1:exon
so has part: feature:6587023-6587183:1:exon
so has part: feature:6601786-6601846:1:exon
so has part: feature:6624294-6624409:1:exon
so has part: feature:6629032-6629149:1:exon
so has part: feature:6630614-6630657:1:exon
so has part: feature:6632971-6633040:1:exon
so has part: feature:6638933-6639021:1:exon
so has part: feature:6641602-6641697:1:exon
so has part: feature:6648575-6648620:1:exon
so has part: feature:6667753-6667867:1:exon
so has part: feature:6679304-6679374:1:exon
so has part: feature:6682437-6682552:1:exon
so has part: feature:6688180-6688430:1:exon
so has part: feature:6689619-6689682:1:exon
so has part: feature:6691994-6692409:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6581690-6581811:1:exon

position:6581811:1
position: 6581811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6587023-6587183:1:exon

position:6587023:1
position: 6587023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6587183:1
position: 6587183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6601786-6601846:1:exon

position:6601786:1
position: 6601786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6601846:1
position: 6601846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6624294-6624409:1:exon

position:6624294:1
position: 6624294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6624409:1
position: 6624409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6629032-6629149:1:exon

position:6629032:1
position: 6629032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6629149:1
position: 6629149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6630614-6630657:1:exon

position:6630614:1
position: 6630614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6630657:1
position: 6630657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6632971-6633040:1:exon

position:6632971:1
position: 6632971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6633040:1
position: 6633040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6638933-6639021:1:exon

position:6638933:1
position: 6638933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6639021:1
position: 6639021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6641602-6641697:1:exon

position:6641602:1
position: 6641602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6641697:1
position: 6641697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6648575-6648620:1:exon

position:6648575:1
position: 6648575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6648620:1
position: 6648620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6667753-6667867:1:exon

position:6667753:1
position: 6667753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6667867:1
position: 6667867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6679304-6679374:1:exon

position:6679304:1
position: 6679304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6679374:1
position: 6679374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6682437-6682552:1:exon

position:6682437:1
position: 6682437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6682552:1
position: 6682552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6688180-6688430:1:exon

position:6688180:1
position: 6688180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6688430:1
position: 6688430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6689619-6689682:1:exon

position:6689619:1
position: 6689619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6689682:1
position: 6689682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6691994-6692409:1:exon

position:6691994:1
position: 6691994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

sh3d21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: sh3d21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH3 domain-containing protein 21
translation: MVEMIAVSGFQSQEYDELSLEVGDIIKNSKCSEDDGWWEGELNGRRGRFPRIFVKEVASQAVECENYTRPRSIRRKPVVKKKKQRWCEVVISYSPVKSEELELNLGDVIEILDQIEDGWWIGRKNGQAGSFPSNFVMEIDNTERKAKRSITESDFGALNQSGPSSDIQVPTFRSAHPSANLGNTGAGRQQLEYYKAIFDYIASAEDELNLRKGDVILVLEKELEDEGWWEGYMDGKQGIFPDNYVVPYVVETEMRNEFLPGVNKEVDIYEKEEPKNEWSEPVVKPGPPKKVPPPVKVKPVLSNLPNKVNEEHAHPPQDWNKPARDKGTDSDSMTFDMLAASTEKLTHLTMDRPKAKGRRPPSPLVATSNQDVKRPAQLATAAKFTHGITQQSEQPSLKTHRATAGKPATGSINSASNPQREAESEDKATTLVALRAEVRSLQLSFDLLKNQHLRDIAALKEEIAEERNKRNTLQAEVEKLRGITTLQKH
SIO_010081: sh3d21
subclass of: SO_0000673
so part of: sh3d21
location: join(6581808..6581811,6587023..6587183,6601786..6601846,6624294..6624409,6629032..6629149,6630614..6630657,6632971..6633040,6638933..6639021,6641602..6641697,6648575..6648620,6667753..6667867,6679304..6679374,6682437..6682552,6688180..6688430,6689619..6689682,6691994..6692041)
location: region:6581808-6692041:1
so has part: feature:6581808-6581811:1:exon
so has part: feature:6587023-6587183:1:exon
so has part: feature:6601786-6601846:1:exon
so has part: feature:6624294-6624409:1:exon
so has part: feature:6629032-6629149:1:exon
so has part: feature:6630614-6630657:1:exon
so has part: feature:6632971-6633040:1:exon
so has part: feature:6638933-6639021:1:exon
so has part: feature:6641602-6641697:1:exon
so has part: feature:6648575-6648620:1:exon
so has part: feature:6667753-6667867:1:exon
so has part: feature:6679304-6679374:1:exon
so has part: feature:6682437-6682552:1:exon
so has part: feature:6688180-6688430:1:exon
so has part: feature:6689619-6689682:1:exon
so has part: feature:6691994-6692041:1:exon

XP_048414222.1
type: Protein
SIO_000068: ncbiprotein

position:6581808:1
position: 6581808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6692041:1
position: 6692041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6581808-6581811:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6587023-6587183:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6601786-6601846:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6624294-6624409:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6629032-6629149:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6630614-6630657:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6632971-6633040:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6638933-6639021:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6641602-6641697:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6648575-6648620:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6667753-6667867:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6679304-6679374:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6682437-6682552:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6688180-6688430:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6689619-6689682:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6691994-6692041:1:exon

LOC125465024
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: LOC125465024
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6714140..6813061)
location: region:6714140-6813061:-1
so has part: feature:6714140-6813061:-1:exon
subclass of: SO_0000010

125465024
type: Gene
SIO_000068: ncbigene

position:6714140:-1
position: 6714140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6813061:-1
position: 6813061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6714140-6813061:-1:exon

LOC125465024
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465024
product: protein eva-1 homolog B-like, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558068.1
SIO_010081: LOC125465024
subclass of: SO_0000673
so part of: LOC125465024
location: complement(join(6714140..6715594,6719715..6719845,6733030..6733197,6812827..6813061))
location: region:6714140-6813061:-1
so has part: feature:6812827-6813061:-1:exon
so has part: feature:6733030-6733197:-1:exon
so has part: feature:6719715-6719845:-1:exon
so has part: feature:6714140-6715594:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6812827-6813061:-1:exon

position:6812827:-1
position: 6812827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6733030-6733197:-1:exon

position:6733030:-1
position: 6733030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6733197:-1
position: 6733197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6719715-6719845:-1:exon

position:6719715:-1
position: 6719715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6719845:-1
position: 6719845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6714140-6715594:-1:exon

position:6715594:-1
position: 6715594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125465024
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465024
product: protein eva-1 homolog B-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558067.1
SIO_010081: LOC125465024
subclass of: SO_0000673
so part of: LOC125465024
location: complement(join(6714140..6715594,6719715..6719845,6733030..6733197,6780927..6781041,6812827..6813061))
location: region:6714140-6813061:-1
so has part: feature:6812827-6813061:-1:exon
so has part: feature:6780927-6781041:-1:exon
so has part: feature:6733030-6733197:-1:exon
so has part: feature:6719715-6719845:-1:exon
so has part: feature:6714140-6715594:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6812827-6813061:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6780927-6781041:-1:exon

position:6780927:-1
position: 6780927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6781041:-1
position: 6781041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6733030-6733197:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6719715-6719845:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6714140-6715594:-1:exon

LOC125465024
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465024
product: protein eva-1 homolog B-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558066.1
SIO_010081: LOC125465024
subclass of: SO_0000673
so part of: LOC125465024
location: complement(join(6714140..6715594,6719715..6719845,6733030..6733197,6780927..6781204))
location: region:6714140-6781204:-1
so has part: feature:6780927-6781204:-1:exon
so has part: feature:6733030-6733197:-1:exon
so has part: feature:6719715-6719845:-1:exon
so has part: feature:6714140-6715594:-1:exon

position:6781204:-1
position: 6781204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6780927-6781204:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6733030-6733197:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6719715-6719845:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6714140-6715594:-1:exon

LOC125465024
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: LOC125465024
product: protein eva-1 homolog B-like, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558069.1
SIO_010081: LOC125465024
subclass of: SO_0000673
so part of: LOC125465024
location: complement(join(6714140..6715594,6719715..6719845,6733030..6733197,6780593..6780770))
location: region:6714140-6780770:-1
so has part: feature:6780593-6780770:-1:exon
so has part: feature:6733030-6733197:-1:exon
so has part: feature:6719715-6719845:-1:exon
so has part: feature:6714140-6715594:-1:exon

position:6780770:-1
position: 6780770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6780593-6780770:-1:exon

position:6780593:-1
position: 6780593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6733030-6733197:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6719715-6719845:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6714140-6715594:-1:exon

LOC125465024
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465024
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein eva-1 homolog B-like
translation: MDIPKAEVTLLTNSIQAYMQIKSNPEKAALYFITGVCFGLMLTLCLLVIRISCHTRTGAAPPAKGKVEEGSEEEDEEEDEEEEEGDSVLPTMTDLTLANHTQPHTNSNVNVFTSAEELERAQLLEERERIIREIWRSGQPDILGSGCHQFEMELMPNGGQREHRTWSPTSEGKY
SIO_010081: LOC125465024
subclass of: SO_0000673
so part of: LOC125465024
location: complement(join(6715137..6715594,6719715..6719781))
location: region:6715137-6719781:-1
so has part: feature:6719715-6719781:-1:exon
so has part: feature:6715137-6715594:-1:exon

XP_048414023.1
type: Protein
SIO_000068: ncbiprotein

position:6715137:-1
position: 6715137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6719781:-1
position: 6719781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6719715-6719781:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6715137-6715594:-1:exon

LOC125465024
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465024
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein eva-1 homolog B-like
translation: MDIPKAEVTLLTNSIQAYMQIKSNPEKAALYFITGVCFGLMLTLCLLVIRISCHTRTGAAPPAKGKVEEGSEEEDEEEDEEEEEGDSVLPTMTDLTLANHTQPHTNSNVNVFTSAEELERAQLLEERERIIREIWRSGQPDILGSGCHQFEMELMPNGGQREHRTWSPTSEGKY
SIO_010081: LOC125465024
subclass of: SO_0000673
so part of: LOC125465024
location: complement(join(6715137..6715594,6719715..6719781))
location: region:6715137-6719781:-1
so has part: feature:6719715-6719781:-1:exon
so has part: feature:6715137-6715594:-1:exon

XP_048414024.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6719715-6719781:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6715137-6715594:-1:exon

LOC125465024
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465024
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein eva-1 homolog B-like
translation: MDIPKAEVTLLTNSIQAYMQIKSNPEKAALYFITGVCFGLMLTLCLLVIRISCHTRTGAAPPAKGKVEEGSEEEDEEEDEEEEEGDSVLPTMTDLTLANHTQPHTNSNVNVFTSAEELERAQLLEERERIIREIWRSGQPDILGSGCHQFEMELMPNGGQREHRTWSPTSEGKY
SIO_010081: LOC125465024
subclass of: SO_0000673
so part of: LOC125465024
location: complement(join(6715137..6715594,6719715..6719781))
location: region:6715137-6719781:-1
so has part: feature:6719715-6719781:-1:exon
so has part: feature:6715137-6715594:-1:exon

XP_048414025.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6719715-6719781:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6715137-6715594:-1:exon

LOC125465024
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: LOC125465024
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein eva-1 homolog B-like
translation: MDIPKAEVTLLTNSIQAYMQIKSNPEKAALYFITGVCFGLMLTLCLLVIRISCHTRTGAAPPAKGKVEEGSEEEDEEEDEEEEEGDSVLPTMTDLTLANHTQPHTNSNVNVFTSAEELERAQLLEERERIIREIWRSGQPDILGSGCHQFEMELMPNGGQREHRTWSPTSEGKY
SIO_010081: LOC125465024
subclass of: SO_0000673
so part of: LOC125465024
location: complement(join(6715137..6715594,6719715..6719781))
location: region:6715137-6719781:-1
so has part: feature:6719715-6719781:-1:exon
so has part: feature:6715137-6715594:-1:exon

XP_048414026.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6719715-6719781:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6715137-6715594:-1:exon

stk40
type: Gene
subclass of: SO_0000704
RO_0002162: 378071
gene: stk40
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6884643..6947518)
location: region:6884643-6947518:-1
so has part: feature:6884643-6947518:-1:exon
subclass of: SO_0000010

125465042
type: Gene
SIO_000068: ncbigene

position:6884643:-1
position: 6884643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6947518:-1
position: 6947518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6884643-6947518:-1:exon

stk40
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: stk40
product: serine/threonine kinase 40, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558101.1
SIO_010081: stk40
subclass of: SO_0000673
so part of: stk40
location: complement(join(6884643..6888519,6892164..6892248,6893485..6893604,6898278..6898422,6908525..6908640,6923174..6923226,6923945..6924166,6924491..6924631,6926641..6926726,6928272..6928398,6947146..6947518))
location: region:6884643-6947518:-1
so has part: feature:6947146-6947518:-1:exon
so has part: feature:6928272-6928398:-1:exon
so has part: feature:6926641-6926726:-1:exon
so has part: feature:6924491-6924631:-1:exon
so has part: feature:6923945-6924166:-1:exon
so has part: feature:6923174-6923226:-1:exon
so has part: feature:6908525-6908640:-1:exon
so has part: feature:6898278-6898422:-1:exon
so has part: feature:6893485-6893604:-1:exon
so has part: feature:6892164-6892248:-1:exon
so has part: feature:6884643-6888519:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6947146-6947518:-1:exon

position:6947146:-1
position: 6947146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6928272-6928398:-1:exon

position:6928272:-1
position: 6928272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6928398:-1
position: 6928398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6926641-6926726:-1:exon

position:6926641:-1
position: 6926641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6926726:-1
position: 6926726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6924491-6924631:-1:exon

position:6924491:-1
position: 6924491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6924631:-1
position: 6924631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6923945-6924166:-1:exon

position:6923945:-1
position: 6923945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6924166:-1
position: 6924166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6923174-6923226:-1:exon

position:6923174:-1
position: 6923174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6923226:-1
position: 6923226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6908525-6908640:-1:exon

position:6908525:-1
position: 6908525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6908640:-1
position: 6908640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6898278-6898422:-1:exon

position:6898278:-1
position: 6898278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6898422:-1
position: 6898422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6893485-6893604:-1:exon

position:6893485:-1
position: 6893485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6893604:-1
position: 6893604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6892164-6892248:-1:exon

position:6892164:-1
position: 6892164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6892248:-1
position: 6892248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6884643-6888519:-1:exon

position:6888519:-1
position: 6888519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

stk40
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 378071
gene: stk40
product: serine/threonine kinase 40, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048558102.1
SIO_010081: stk40
subclass of: SO_0000673
so part of: stk40
location: complement(join(6884643..6888519,6892164..6892248,6893485..6893604,6898278..6898422,6908525..6908640,6923174..6923226,6923945..6924166,6924491..6924631,6926641..6926726,6928272..6928398,6945539..6945885))
location: region:6884643-6945885:-1
so has part: feature:6945539-6945885:-1:exon
so has part: feature:6928272-6928398:-1:exon
so has part: feature:6926641-6926726:-1:exon
so has part: feature:6924491-6924631:-1:exon
so has part: feature:6923945-6924166:-1:exon
so has part: feature:6923174-6923226:-1:exon
so has part: feature:6908525-6908640:-1:exon
so has part: feature:6898278-6898422:-1:exon
so has part: feature:6893485-6893604:-1:exon
so has part: feature:6892164-6892248:-1:exon
so has part: feature:6884643-6888519:-1:exon

position:6945885:-1
position: 6945885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6945539-6945885:-1:exon

position:6945539:-1
position: 6945539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6928272-6928398:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6926641-6926726:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6924491-6924631:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6923945-6924166:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6923174-6923226:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6908525-6908640:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6898278-6898422:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6893485-6893604:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6892164-6892248:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6884643-6888519:-1:exon

stk40
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 378071
gene: stk40
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase 40 isoform X1
translation: MSGDCRMKRRAADRGAGESSARSKALSTGISGSNSKRAGPFILGPRLGNSPVQSIVQCLARKDGTDDFYQLKILTLEDRGERMETQEERQGKMLLHTEYSLLSLLPNQDGVVHHHGLFQDRAVVEEFESSKLVRRMKKRICLVLDCLCAHDFSDKTADLINLQHYVIKEKRLSERETIAIFCDVVRVVEALHKKNIVHRDLKLGNMVLNKRTHRITITNFCLGKHLVSEDDLLKDQRGSPAYISPDVLSGRPYRGKPSDMWALGVVLFTMLYGQFPFYDSIPQELFRKIKAAEYTIPEDCRVSENTVCLIRKLLLLDPQQRLTATEVLDSLSSIIATWQSLSSLHGPLQVVPDIDDQVNNPEILQEAKVTEESSQYEFENYMRQQLMLAEGNTMHEVKSFAHKRQFSNIPPVRRLGHDAQPVNPLDAAILAQRYLRK
SIO_010081: stk40
subclass of: SO_0000673
so part of: stk40
location: complement(join(6888304..6888519,6892164..6892248,6893485..6893604,6898278..6898422,6908525..6908640,6923174..6923226,6923945..6924166,6924491..6924631,6926641..6926726,6928272..6928398,6947146..6947148))
location: region:6888304-6947148:-1
so has part: feature:6947146-6947148:-1:exon
so has part: feature:6928272-6928398:-1:exon
so has part: feature:6926641-6926726:-1:exon
so has part: feature:6924491-6924631:-1:exon
so has part: feature:6923945-6924166:-1:exon
so has part: feature:6923174-6923226:-1:exon
so has part: feature:6908525-6908640:-1:exon
so has part: feature:6898278-6898422:-1:exon
so has part: feature:6893485-6893604:-1:exon
so has part: feature:6892164-6892248:-1:exon
so has part: feature:6888304-6888519:-1:exon

XP_048414058.1
type: Protein
SIO_000068: ncbiprotein

position:6888304:-1
position: 6888304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6947148:-1
position: 6947148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6947146-6947148:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6928272-6928398:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6926641-6926726:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6924491-6924631:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6923945-6924166:-1:exon