Loigolactobacillus backii strain TMW 1.1989 plasmid pL11989-3, complete sequence.
type: Entry
definition: Loigolactobacillus backii strain TMW 1.1989 plasmid pL11989-3, complete sequence.
sequence version: NZ_CP014876.1
sequence date: 2023-02-06
sequence: sequence
division: CON
label: NZ_CP014876.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN04505727
keyword: RefSeq
source: Loigolactobacillus backii
organism: Loigolactobacillus backii
taxonomy: Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Loigolactobacillus.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP014876.1.\nSource DNA or bacteria available from the culture collection of the\nTechnische Mikrobiologie Weihenstephan upon request and only if\npermitted by a potential cooperation partner. Individual decisions.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\nThis genome has a base modification file available.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Celera Assembler v. 1\nAssembly Name :: Lbackii11989-1\nLong Assembly Name :: Lactobacillus backii TMW 1.1989 1\nGenome Coverage :: 89\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/05/2023 23:00:11\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,668\nCDSs (total) :: 2,582\nGenes (coding) :: 2,526\nCDSs (with protein) :: 2,526\nGenes (RNA) :: 86\nrRNAs :: 5, 5, 5 (5S, 16S, 23S)\ncomplete rRNAs :: 5, 5, 5 (5S, 16S, 23S)\ntRNAs :: 67\nncRNAs :: 4\nPseudo Genes (total) :: 56\nCDSs (without protein) :: 56\nPseudo Genes (ambiguous residues) :: 0 of 56\nPseudo Genes (frameshifted) :: 13 of 56\nPseudo Genes (incomplete) :: 36 of 56\nPseudo Genes (internal stop) :: 16 of 56\nPseudo Genes (multiple problems) :: 9 of 56\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 11878
topology: circular
so has quality: SO_0000988
location: 1..11878
location: region:1-11878:1
RO_0002162: 375175

NZ_CP014876
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN04505727
type: BioSample
SIO_000068: biosample

1
title: Pediococcus and Lactobacillus from brewery environment - whole genome sequencing and assembly
author: Behr, J.
author: Geissler, A.J.
author: Vogel, R.F.
journal: Unpublished

2
title: Direct Submission
author: Behr, J.
author: Geissler, A.J.
author: Vogel, R.F.
journal: Submitted (18-MAR-2016) Technische Mikrobiologie, Technische Universitaet Muenchen, Gregor-Mendel-Strasse 4, Freising, Bavaria 85354, Germany

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11878:1
position: 11878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-11878:1:source
so part of: sequence
organism: Loigolactobacillus backii
mol type: genomic DNA
strain: TMW 1.1989
isolation source: beer
plasmid: pL11989-3
country: Germany

375175
type: Taxonomy
SIO_000068: taxonomy

AYR53_RS12620
type: Gene
subclass of: SO_0000704
RO_0002162: 375175
locus tag: AYR53_RS12620
old locus tag: AYR53_12615
so part of: sequence
location: join(11070..11878,1..127)
location: region:1-11878:1
so has part: feature:11070-11878:1:exon
so has part: feature:1-127:1:exon
subclass of: SO_0000010

42983103
type: Gene
SIO_000068: ncbigene

urn:…
SIO_000300: 1
SIO_000628: feature:11070-11878:1:exon

position:11070:1
position: 11070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-127:1:exon

position:127:1
position: 127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AYR53_RS12620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 375175
locus tag: AYR53_RS12620
old locus tag: AYR53_12615
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016526818.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MSNELIKYDPELNTIPLRKFTPIEMNLFFSIISRMRDKGDQTVRFSFEQLKDLSNYKPTANNRFEDDIQRTYEKLMGLHFGRRSKSGLNREMFVMFTKFRIVGEADSPYIDIEVYKDALPLLNNLDTWVRYALAEFRDLRSSYAKTAFRLLKGFRTTGYAFLSKEDFFELLDIPKSYWKKPGDVDRYVLKPIREELTPLFRGLTVRKKYGKGRGKPVIGYSFTWKPEKKDANDFSQGQFQDERQKLFNIQHNGELTEQEKWRAIDKVKGLTLGSTEKQALADKQAEHDKKIRDQARQEALAELRKGFGNHA
SIO_010081: AYR53_RS12620
subclass of: SO_0000673
so part of: AYR53_RS12620
location: join(11070..11878,1..127)
location: region:1-11878:1
so has part: feature:11070-11878:1:exon
so has part: feature:1-127:1:exon

WP_002834578.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11070-11878:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-127:1:exon

AYR53_RS12625
type: Gene
subclass of: SO_0000704
RO_0002162: 375175
locus tag: AYR53_RS12625
old locus tag: AYR53_12620
so part of: sequence
location: 120..638
location: region:120-638:1
so has part: feature:120-638:1:exon
subclass of: SO_0000010

42983104
type: Gene
SIO_000068: ncbigene

position:120:1
position: 120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:638:1
position: 638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120-638:1:exon

AYR53_RS12625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 375175
locus tag: AYR53_RS12625
old locus tag: AYR53_12620
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007745771.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HTH domain-containing protein
translation: MPKTIRELADELGVSKQAIWQKIKRDASIDLRQFTSTKGNTVYVDVDGQKAIKAMFSNNSSTRYRQQKDDVDDNKKDAVDGQDEVKFLRNLVSEIQSEKKELHKLLDQQQRLALQDKQLLEEYKAEIKDLKVLTMAPHDDGEKEVTSDKQPEPENSTPESQPKPKKWWRFGK
SIO_010081: AYR53_RS12625
subclass of: SO_0000673
so part of: AYR53_RS12625
location: 120..638
location: region:120-638:1
so has part: feature:120-638:1:exon

WP_068281315.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:120-638:1:exon

AYR53_RS12630
type: Gene
subclass of: SO_0000704
RO_0002162: 375175
locus tag: AYR53_RS12630
old locus tag: AYR53_12625
so part of: sequence
location: 671..3643
location: region:671-3643:1
so has part: feature:671-3643:1:exon
subclass of: SO_0000010

42983105
type: Gene
SIO_000068: ncbigene

position:671:1
position: 671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3643:1
position: 3643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:671-3643:1:exon

AYR53_RS12630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 375175
locus tag: AYR53_RS12630
old locus tag: AYR53_12625
EC number: 3.1.21.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010010578.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I restriction endonuclease subunit R
translation: MAEDKFEQAVIDKLKSEGWEYLTDYSSVTVDRLYDHWRDILNANNRKRLEDTPLSDNEFEQVKLELTKNKTPYDAQLMLAGAGGVGTVPLNRDDGTQLELEIFYGDEVAGGHSRYEVVNQITFTDLATSLSSKRRIDIMLLINGLPVAHIEEKDESLQNQWNAFEQFQKYDGDGMYTGLFSFVQVQFVLSQNSAHYFARPKNSDSYNRDFAFGWRDDAGKDVTNTMTFIHEVMGIPALHRLVTVNMIPDAANDNLMVMRSYQIQATRQILDRMREMDQNGLVEKEGGYVWHTTGSGKTVTSFKVAQLLASRPRVEDVLFIVDRVDLVNQTYENFKSFAYKTFENRIQVVNGSELKRALKHDNTAHIYLITVQGLDKAIKSGLASNKRMVILMDEAHRSASGDAVSRIKQALPKTTWFGFTGTPNFYSDEVHDVKTSKDISTYDIFGPRLHRYTIKDAIGDGNVLGFDVTYYETDFEHDLDSGLTEKKLEKEVYASLPFRQAVVADIQRNWATNASGPINMGVREPNQFQGMLAVSGKQAVASYYSLFKQLAPELRVAMTYSRDEANGTGASDLQAALKQAMQDYMTFYGTRNFLEDKDPQRAYLNDMTKRIARKKPYNKGNDADRLDLIIVSDQLLTGFDSKFVNIIYMDKILGEGPLIQAMSRTNRTIDKTAKPHGKVRFYRQGAVMEEKVKDALVIYTKGGNDTLADAGNTPDDQEQKDLFDEGILAPKAADKIVDLNPQIKRLQQLAGDDFSQMPRSKKEQVEFVVTAAQVNSQVQQLVQQGYVLGNSVEGPEGTITLGIESATQLSSLQARMNDVNEVLPTGPLVDLTNIKLVLQSFANEIIDYDKLVDLLNAYMDEVSVANRAAVEEHVQPLDQDNREEIGQVLDGIEQGEYTEPFTTETLKSVRKAIRTAQQDLKIYKWAADHDYNGNDILAAYELYRPGIPLVDNTALNQYLQDLESHLDIGFFELADFEESLLNYFAKITKK
SIO_010081: AYR53_RS12630
subclass of: SO_0000673
so part of: AYR53_RS12630
location: 671..3643
location: region:671-3643:1
so has part: feature:671-3643:1:exon

WP_068281316.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:671-3643:1:exon

AYR53_RS12635
type: Gene
subclass of: SO_0000704
RO_0002162: 375175
locus tag: AYR53_RS12635
old locus tag: AYR53_12630
so part of: sequence
location: 3671..5263
location: region:3671-5263:1
so has part: feature:3671-5263:1:exon
subclass of: SO_0000010

42983106
type: Gene
SIO_000068: ncbigene

position:3671:1
position: 3671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5263:1
position: 5263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3671-5263:1:exon

AYR53_RS12635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 375175
locus tag: AYR53_RS12635
old locus tag: AYR53_12630
EC number: 2.1.1.72
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013102129.1
GO function: GO:0015666 - restriction endodeoxyribonuclease activity [Evidence IEA]; GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO process: GO:0006306 - DNA methylation [Evidence IEA]; GO:0009307 - DNA restriction-modification system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I restriction-modification system subunit M
translation: MALTADKQALIWKTLNETRGKIEPSEYKNYIFGLMFYKFLSEKAQTWLDSQLRGETWSSVWEQNPEKAAAFMQTKLGYVIQPGELFSDWQAAINVDQFNITNVADALGHFNQGIQPGAKATFEGIFDDMDLTSSRLGSNTQTRTKTLMDWISLIDQIELDEDADVLGDLYEYLIGMFAANSGAKAGEFYTPHQVSDIMARILTAGREDMPTYSLYDPAMGSGSLLLTTASYMKNDGVRGAIKYYGQEVITTTYNLGRINLMMHGVEYNDIHIHNADTLSSDWPDGVQSGVDSPRMFDAVMANPPYSLKWDNTNREDDPRFKAGIAPKSKADFAFLQHGLYHLKQDGRMAIVLPHGVLFRGAAEGRIRQALLENRNISAVIGLPEKIFTNAGIPTIIMILEKNRTTDDVLFIDASKGFEKQKNNNKLRQEDVDLIVETFLKREDVAKYAHLASFEEIKENDFNLNIPRYVDTFEEEDPVDLVAVSQELGDINRDIEQSEADLLAMISDLAVTDDSKVIIESAKQLLGGHHE
SIO_010081: AYR53_RS12635
subclass of: SO_0000673
so part of: AYR53_RS12635
location: 3671..5263
location: region:3671-5263:1
so has part: feature:3671-5263:1:exon

WP_068281317.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3671-5263:1:exon

AYR53_RS12640
type: Gene
subclass of: SO_0000704
RO_0002162: 375175
locus tag: AYR53_RS12640
old locus tag: AYR53_12635
so part of: sequence
location: 5256..6419
location: region:5256-6419:1
so has part: feature:5256-6419:1:exon
subclass of: SO_0000010

42983107
type: Gene
SIO_000068: ncbigene

position:5256:1
position: 5256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6419:1
position: 6419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5256-6419:1:exon

AYR53_RS12640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 375175
locus tag: AYR53_RS12640
old locus tag: AYR53_12635
EC number: 3.1.21.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005878869.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006304 - DNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: restriction endonuclease subunit S
translation: MSNKVPQLRFNGYSDAWVQRKLGAITDSFSGGTPTAGKAEYYGGEIPFIRSGEISSDSTELFITDAGLNNSSAKMVGIGDILYALYGATSGETSISRINGAINQAILAIRSTKGDDPYMIVQWLKKQKEPIISTYLQGGQGNLSGSIVKDLLITLPKNKDEQAKVGSFFKQLDQTITLHQRKLAKLKKLKQGYLQKMFPKNGAKVPELRFAGFADAWEERKLGEIFNYEQPTKYIVKSTEYDDNFNTPVLTAGKSFLLGYTDEISGIKNATVENPVVIFDDFTTGSHYVDFPFKIKSSAMKLLSLNDNSDNFYFMFNTLKNIKYVPQSHERHWISKFSSFEIYKPSQEEQQKIGSFFKQLDATIALHQRKLDLLKEQKKGFLEKMFV
SIO_010081: AYR53_RS12640
subclass of: SO_0000673
so part of: AYR53_RS12640
location: 5256..6419
location: region:5256-6419:1
so has part: feature:5256-6419:1:exon

WP_068281318.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5256-6419:1:exon

AYR53_RS12645
type: Gene
subclass of: SO_0000704
RO_0002162: 375175
locus tag: AYR53_RS12645
old locus tag: AYR53_12640
so part of: sequence
location: complement(6527..8299)
location: region:6527-8299:-1
so has part: feature:6527-8299:-1:exon
subclass of: SO_0000010

42983108
type: Gene
SIO_000068: ncbigene

position:6527:-1
position: 6527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8299:-1
position: 8299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6527-8299:-1:exon

AYR53_RS12645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 375175
locus tag: AYR53_RS12645
old locus tag: AYR53_12640
inference: COORDINATES: protein motif:HMM:NF022062.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AIPR family protein
translation: MNTVSPDVVNSIFNDYKNNFSSNINEDKIFEHFTVDNYFKTLNLSIEELESGLVDSQSDFGVDGFYIFIDNLLVSDFNIEDFDPKTVSKNVEIVVHIFQIKNTVKIHENVPLKFHQFGGWLFGDTQLELPTTMSDIIKERVVFFRSLVVKLATKFPKVTIQFHHVTRANESAVSTGYIEKANSVFDTLKKNTFTPLTIRHDLIGNNSLYALAEKNIPKSGELMFNNMLNAPTYSDTKNGYVVTAYLRDYFDFITTKSETDDYLLNEEMFESNIRDYQNRTSVNTDIEKTLADSQGNTDFWWLNNGITILASEGSMVSKKLSLENVQIVNGLQTSNSIFNIFKNKSSAERSQDERSILIKIITLDDMDETRDEIIRATNSQNPVTVSQLRSSDPIQRTIELFLKSKDIFYDRKKNYYKNQHKPRAQIFSINYLAQAIVSIIDSNPVKARSNPTILIKKDEDYTKVFNSEYDIKIFYYAILMRNRVSEYLKSIQKNKSDDAVLINIAKYYELHVTRVLASLVTKQQNVTPTILSHLKISDLNISDDKISDSIDILKKAIEYSEIDLSKKASLNIKLTEETAKYLENIDKNSI
SIO_010081: AYR53_RS12645
subclass of: SO_0000673
so part of: AYR53_RS12645
location: complement(6527..8299)
location: region:6527-8299:-1
so has part: feature:6527-8299:-1:exon

WP_056947050.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6527-8299:-1:exon

AYR53_RS12650
type: Gene
subclass of: SO_0000704
RO_0002162: 375175
locus tag: AYR53_RS12650
old locus tag: AYR53_12645
so part of: sequence
location: complement(8508..8852)
location: region:8508-8852:-1
so has part: feature:8508-8852:-1:exon
subclass of: SO_0000010

42983109
type: Gene
SIO_000068: ncbigene

position:8508:-1
position: 8508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8852:-1
position: 8852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8508-8852:-1:exon

AYR53_RS12650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 375175
locus tag: AYR53_RS12650
old locus tag: AYR53_12645
EC number: 3.1.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011241744.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system PemK/MazF family toxin
translation: MVSQGDIFYVNFNPSRGHEQMNKRPAIALSNDLVCQTSNMTIVAPISSTKRNFPMYHRLTSSQTVYGKVLLDQTIALDLRARHVTDETIVDHVSREELEEIITLYKLLFSIDDK
SIO_010081: AYR53_RS12650
subclass of: SO_0000673
so part of: AYR53_RS12650
location: complement(8508..8852)
location: region:8508-8852:-1
so has part: feature:8508-8852:-1:exon

WP_001748110.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8508-8852:-1:exon

AYR53_RS12655
type: Gene
subclass of: SO_0000704
RO_0002162: 375175
locus tag: AYR53_RS12655
old locus tag: AYR53_12650
so part of: sequence
location: complement(8846..9109)
location: region:8846-9109:-1
so has part: feature:8846-9109:-1:exon
subclass of: SO_0000010

42983110
type: Gene
SIO_000068: ncbigene

position:8846:-1
position: 8846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9109:-1
position: 9109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8846-9109:-1:exon

AYR53_RS12655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 375175
locus tag: AYR53_RS12655
old locus tag: AYR53_12650
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003715897.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AbrB/MazE/SpoVT family DNA-binding domain-containing protein
translation: MELIKEQTRLAKWGNSKAARIPSQIIKQLKLDDNQDMTITIENGSIVLTPIKKNPNNIHELFKDWKDDGKRDHELDWGKSEGNELQW
SIO_010081: AYR53_RS12655
subclass of: SO_0000673
so part of: AYR53_RS12655
location: complement(8846..9109)
location: region:8846-9109:-1
so has part: feature:8846-9109:-1:exon

WP_068281312.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8846-9109:-1:exon

AYR53_RS12660
type: Gene
subclass of: SO_0000704
RO_0002162: 375175
locus tag: AYR53_RS12660
old locus tag: AYR53_12655
so part of: sequence
location: 9195..9782
location: region:9195-9782:1
so has part: feature:9195-9782:1:exon
subclass of: SO_0000010

42983111
type: Gene
SIO_000068: ncbigene

position:9195:1
position: 9195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9782:1
position: 9782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9195-9782:1:exon

AYR53_RS12660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 375175
locus tag: AYR53_RS12660
old locus tag: AYR53_12655
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005917937.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific integrase
translation: MQQVVLPIKDSNVLKEVQDTLLNNFKAGRRNYTIFQVGKATLLRVSDVMGLKQTDIFNLDGSIKQNAFIHDRKTGKPNTLYLKPVQTELLLYRQWLLDHRLASEWLFPSIQHPERHITEKQFYKIMSKVGDLLGINYLGTHTMRKTGAYRVYTQSNYNIGLVMHLLNHSSEAMTLAYLGLDQASTESMLDQIDFG
SIO_010081: AYR53_RS12660
subclass of: SO_0000673
so part of: AYR53_RS12660
location: 9195..9782
location: region:9195-9782:1
so has part: feature:9195-9782:1:exon

WP_068281313.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9195-9782:1:exon

AYR53_RS12665
type: Gene
subclass of: SO_0000704
RO_0002162: 375175
locus tag: AYR53_RS12665
old locus tag: AYR53_12660
so part of: sequence
location: 10138..10350
location: region:10138-10350:1
so has part: feature:10138-10350:1:exon
subclass of: SO_0000010

42983112
type: Gene
SIO_000068: ncbigene

position:10138:1
position: 10138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10350:1
position: 10350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10138-10350:1:exon

AYR53_RS12665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 375175
locus tag: AYR53_RS12665
old locus tag: AYR53_12660
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010620841.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLGVIKMDEKKVLKPIDEMLADPWQVDIQELFEAFVNEPGEIKKNLYDSLYTYVLQKRQEDIINRPGFVI
SIO_010081: AYR53_RS12665
subclass of: SO_0000673
so part of: AYR53_RS12665
location: 10138..10350
location: region:10138-10350:1
so has part: feature:10138-10350:1:exon

WP_068281314.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10138-10350:1:exon