Flammeovirga kamogawensis strain YS10 plasmid p1, complete sequence.
Bacteria; Bacteroidota; Cytophagia; Cytophagales; Flammeovirgaceae; Flammeovirga.
Comparative genomic studies on the polysaccharide-degrading batcterial strains of the Flammeovirga genus
Submitted (29-MAY-2021) Shandong University, National Glycoengineering Research Center, No. 72, Binhai Road, Jimo District, Qingdao, Shandong 266237, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP076130.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 01-APR-2021\nAssembly Method :: Unicycler v. 0.4.8\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 480.0x\nSequencing Technology :: PacBio; Illumina NovaSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 10/06/2022 22:59:26\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 5,396\nCDSs (total) :: 5,264\nGenes (coding) :: 5,245\nCDSs (with protein) :: 5,245\nGenes (RNA) :: 132\nrRNAs :: 10, 10, 10 (5S, 16S, 23S)\ncomplete rRNAs :: 10, 10, 10 (5S, 16S, 23S)\ntRNAs :: 99\nncRNAs :: 3\nPseudo Genes (total) :: 19\nCDSs (without protein) :: 19\nPseudo Genes (ambiguous residues) :: 0 of 19\nPseudo Genes (frameshifted) :: 1 of 19\nPseudo Genes (incomplete) :: 15 of 19\nPseudo Genes (internal stop) :: 3 of 19\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
type strain of Flammeovirga kamogawensis
COORDINATES: ab initio prediction:GeneMarkS-2+
GO:0016791 - phosphatase activity [Evidence IEA]
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF018884.2
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013868.2
GO:0045152 - antisigma factor binding [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
This anti-anti-sigma factor, or anti-sigma factor antagonist, belongs to a family that includes characterized members SpoIIAA, RsbV, RsfA, and RsfB; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
COORDINATES: similar to AA sequence:RefSeq:WP_017497598.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_020528267.1
COORDINATES: similar to AA sequence:RefSeq:WP_007139487.1
GO:0008490 - arsenite secondary active transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04291.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0015446 - ATPase-coupled arsenite transmembrane transporter activity [Evidence IEA]
GO:0071722 - detoxification of arsenic-containing substance [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002981231.1
COORDINATES: protein motif:HMM:NF039587.1
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: protein motif:HMM:NF024242.2
GO:0019867 - outer membrane [Evidence IEA]
COORDINATES: protein motif:HMM:NF013235.2
COORDINATES: protein motif:HMM:NF013793.2
COORDINATES: protein motif:HMM:NF024487.2
COORDINATES: protein motif:HMM:NF019315.2
COORDINATES: protein motif:HMM:NF024180.2
COORDINATES: protein motif:HMM:NF013080.2
GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024753.2
COORDINATES: protein motif:HMM:TIGR04056.1
COORDINATES: protein motif:HMM:NF019592.2
RagB/SusD family nutrient uptake outer membrane protein
COORDINATES: protein motif:HMM:NF025128.2
COORDINATES: similar to AA sequence:RefSeq:WP_004320036.1
right-handed parallel beta-helix repeat-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002698575.1
organic hydroperoxide resistance protein
COORDINATES: similar to AA sequence:RefSeq:WP_019597297.1
COORDINATES: similar to AA sequence:RefSeq:WP_019990408.1
COORDINATES: protein motif:HMM:NF013283.2
COORDINATES: protein motif:HMM:NF014081.2
helix-turn-helix transcriptional regulator
COORDINATES: protein motif:HMM:NF023568.2
COORDINATES: protein motif:HMM:NF036516.2
COORDINATES: similar to AA sequence:RefSeq:WP_018475691.1
COORDINATES: protein motif:HMM:NF012869.2
peptidase domain-containing ABC transporter
COORDINATES: protein motif:HMM:NF015983.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012801.2
outer membrane beta-barrel family protein
COORDINATES: protein motif:HMM:NF013594.2
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024957.2
COORDINATES: similar to AA sequence:RefSeq:WP_010136722.1
COORDINATES: protein motif:HMM:TIGR04183.1
T9SS type A sorting domain-containing protein
COORDINATES: protein motif:HMM:NF027464.2
COORDINATES: similar to AA sequence:RefSeq:WP_008862666.1
COORDINATES: protein motif:HMM:NF012770.2
GO:0016021 - integral component of membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
ABC transporter transmembrane domain-containing protein
COORDINATES: protein motif:HMM:NF012787.2
GO:0016209 - antioxidant activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01200.1
COORDINATES: protein motif:HMM:NF014851.2
COORDINATES: similar to AA sequence:RefSeq:WP_009093992.1
COORDINATES: similar to AA sequence:RefSeq:WP_004320057.1
COORDINATES: protein motif:HMM:NF014567.2
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
hybrid sensor histidine kinase/response regulator transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_010134449.1
COORDINATES: similar to AA sequence:RefSeq:WP_018475690.1
COORDINATES: similar to AA sequence:RefSeq:WP_008615315.1
PQQ-binding-like beta-propeller repeat protein
COORDINATES: protein motif:HMM:NF015531.2
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018475698.1
COORDINATES: similar to AA sequence:RefSeq:WP_010853386.1
COORDINATES: protein motif:HMM:NF039201.1
COORDINATES: protein motif:HMM:NF012956.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF019260.2
COORDINATES: protein motif:HMM:NF014237.2
COORDINATES: similar to AA sequence:RefSeq:WP_004311088.1
COORDINATES: similar to AA sequence:RefSeq:WP_002559318.1
COORDINATES: similar to AA sequence:RefSeq:WP_009224137.1
COORDINATES: protein motif:HMM:NF012377.2
COORDINATES: protein motif:HMM:NF026250.2
triple tyrosine motif-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008838662.1
COORDINATES: similar to AA sequence:RefSeq:WP_015264028.1
COORDINATES: similar to AA sequence:RefSeq:WP_012023651.1
GO:0003908 - methylated-DNA-[protein]-cysteine S-methyltransferase activity [Evidence IEA]
methylated-DNA--[protein]-cysteine S-methyltransferase
COORDINATES: protein motif:HMM:NF025253.2
COORDINATES: protein motif:HMM:NF015338.2
endonuclease/exonuclease/phosphatase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013620663.1
COORDINATES: protein motif:HMM:NF040146.1
COORDINATES: similar to AA sequence:RefSeq:WP_014997083.1
GO:0004518 - nuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: protein motif:HMM:NF012610.2
COORDINATES: protein motif:HMM:NF013559.2
COORDINATES: protein motif:HMM:NF025447.2
COORDINATES: protein motif:HMM:NF015674.2
COORDINATES: protein motif:HMM:NF014385.2
COORDINATES: protein motif:HMM:TIGR01730.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014780946.1
COORDINATES: similar to AA sequence:RefSeq:WP_009583490.1
COORDINATES: protein motif:HMM:NF025092.2
carboxypeptidase-like regulatory domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010583964.1
COORDINATES: similar to AA sequence:RefSeq:WP_002538034.1
COORDINATES: protein motif:HMM:NF027363.2
COORDINATES: protein motif:HMM:NF019365.2
COORDINATES: protein motif:HMM:NF018400.2
COORDINATES: protein motif:HMM:TIGR03696.1
COORDINATES: similar to AA sequence:RefSeq:WP_013763358.1
Rpn family recombination-promoting nuclease/putative transposase
COORDINATES: protein motif:HMM:NF014427.2
COORDINATES: protein motif:HMM:NF013739.2
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF020134.2
COORDINATES: protein motif:HMM:NF014795.2
COORDINATES: protein motif:HMM:TIGR01782.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012548.2
COORDINATES: similar to AA sequence:RefSeq:WP_017081818.1
COORDINATES: protein motif:HMM:TIGR00377.1
COORDINATES: protein motif:HMM:NF024579.2
COORDINATES: similar to AA sequence:RefSeq:WP_013551454.1
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011588818.1
GO:0018784 - (S)-2-haloacid dehalogenase activity [Evidence IEA]
GO:0006805 - xenobiotic metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00745.1
GO:0008677 - 2-dehydropantoate 2-reductase activity [Evidence IEA]
GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF036966.2
COORDINATES: protein motif:HMM:NF033591.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009088041.1
COORDINATES: similar to AA sequence:RefSeq:WP_020599637.1
Crp/Fnr family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_018614565.1
COORDINATES: protein motif:HMM:NF037435.2
COORDINATES: similar to AA sequence:RefSeq:WP_008681284.1
COORDINATES: similar to AA sequence:RefSeq:WP_018690451.1
carboxymuconolactone decarboxylase family protein
COORDINATES: protein motif:HMM:NF012961.2
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014201562.1
COORDINATES: similar to AA sequence:RefSeq:WP_003500316.1
GO:0102039 - NADH-dependent peroxiredoxin activity [Evidence IEA]
GO:0006979 - response to oxidative stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016268913.1
GO:0016668 - oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor [Evidence IEA]
GO:0009398 - FMN biosynthetic process [Evidence IEA]; GO:0006805 - xenobiotic metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024599.2
COORDINATES: similar to AA sequence:RefSeq:WP_016661765.1
COORDINATES: protein motif:HMM:NF012271.2
COORDINATES: protein motif:HMM:NF012700.2
COORDINATES: protein motif:HMM:NF033516.0
COORDINATES: similar to AA sequence:RefSeq:WP_018342133.1
COORDINATES: similar to AA sequence:RefSeq:WP_010179919.1
COORDINATES: protein motif:HMM:NF012402.2
COORDINATES: protein motif:HMM:NF023273.2
COORDINATES: similar to AA sequence:RefSeq:WP_013044582.1
GO:0020037 - heme binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01035.1
GO:0008883 - glutamyl-tRNA reductase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005858075.1
GO:0004747 - ribokinase activity [Evidence IEA]
GO:0006014 - D-ribose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014021217.1
GO:0015144 - carbohydrate transmembrane transporter activity [Evidence IEA]
GO:0034219 - carbohydrate transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF015692.2
ADP-ribosylglycohydrolase family protein
COORDINATES: protein motif:HMM:NF024181.2
SusD/RagB family nutrient-binding outer membrane lipoprotein
GO:0045203 - integral component of cell outer membrane [Evidence IEA]
GO:0071702 - organic substance transport [Evidence IEA]
SusC/RagA family TonB-linked outer membrane protein
COORDINATES: similar to AA sequence:RefSeq:WP_020535739.1
COORDINATES: similar to AA sequence:RefSeq:WP_004324067.1
COORDINATES: protein motif:HMM:NF020367.2
COORDINATES: protein motif:HMM:NF019349.2
FadR/GntR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_020528842.1
GO:0005515 - protein binding [Evidence IEA]
fibronectin type III domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012112617.1
COORDINATES: protein motif:HMM:NF012655.2
COORDINATES: protein motif:HMM:NF025054.2
COORDINATES: similar to AA sequence:RefSeq:WP_007228783.1
COORDINATES: similar to AA sequence:RefSeq:WP_010134759.1
COORDINATES: protein motif:HMM:NF024777.2
COORDINATES: protein motif:HMM:NF019126.2
COORDINATES: protein motif:HMM:TIGR04456.1
COORDINATES: protein motif:HMM:NF012862.2
COORDINATES: similar to AA sequence:RefSeq:WP_013043441.1
COORDINATES: protein motif:HMM:NF012925.2
COORDINATES: protein motif:HMM:NF012301.2
COORDINATES: protein motif:HMM:NF014502.2
GO:0009341 - beta-galactosidase complex [Evidence IEA]
GO:0004565 - beta-galactosidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020538248.1
COORDINATES: similar to AA sequence:RefSeq:WP_010135920.1
COORDINATES: similar to AA sequence:RefSeq:WP_018944638.1
COORDINATES: similar to AA sequence:RefSeq:WP_008202267.1
COORDINATES: protein motif:HMM:NF023218.2
GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]
COORDINATES: protein motif:HMM:NF014850.2
COORDINATES: similar to AA sequence:RefSeq:WP_006743728.1
COORDINATES: protein motif:HMM:NF012308.2
COORDINATES: protein motif:HMM:NF019581.2
COORDINATES: protein motif:HMM:NF021462.2
COORDINATES: protein motif:HMM:NF012257.2
COORDINATES: similar to AA sequence:RefSeq:WP_012500959.1
COORDINATES: similar to AA sequence:RefSeq:WP_008469187.1
COORDINATES: similar to AA sequence:RefSeq:WP_019275916.1
COORDINATES: similar to AA sequence:RefSeq:WP_008034358.1
GO:0036524 - protein deglycase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019376617.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024810.2
COORDINATES: similar to AA sequence:RefSeq:WP_006988449.1
COORDINATES: protein motif:HMM:NF037309.2
COORDINATES: protein motif:HMM:NF014516.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013579.2
GO:0006304 - DNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005785622.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016213099.1
COORDINATES: protein motif:HMM:NF025304.2
COORDINATES: similar to AA sequence:RefSeq:WP_007093967.1
COORDINATES: similar to AA sequence:RefSeq:WP_008992925.1
COORDINATES: similar to AA sequence:RefSeq:WP_013455192.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF025879.2
COORDINATES: similar to AA sequence:RefSeq:WP_017733114.1
COORDINATES: similar to AA sequence:RefSeq:WP_010136715.1
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase
COORDINATES: similar to AA sequence:RefSeq:WP_013621373.1
COORDINATES: similar to AA sequence:RefSeq:WP_013621374.1
COORDINATES: similar to AA sequence:RefSeq:WP_010136712.1
mandelate racemase/muconate lactonizing enzyme family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013549253.1
COORDINATES: similar to AA sequence:RefSeq:WP_013549262.1
COORDINATES: similar to AA sequence:RefSeq:WP_010136708.1
COORDINATES: similar to AA sequence:RefSeq:WP_020568214.1
COORDINATES: similar to AA sequence:RefSeq:WP_011573777.1
COORDINATES: similar to AA sequence:RefSeq:WP_010136276.1
COORDINATES: similar to AA sequence:RefSeq:WP_011610357.1
COORDINATES: similar to AA sequence:RefSeq:WP_009097566.1
COORDINATES: similar to AA sequence:RefSeq:WP_014165881.1
COORDINATES: protein motif:HMM:NF022142.2
COORDINATES: similar to AA sequence:RefSeq:WP_014021575.1
COORDINATES: similar to AA sequence:RefSeq:WP_015481208.1
COORDINATES: protein motif:HMM:NF014414.2
COORDINATES: protein motif:HMM:NF021371.2
COORDINATES: protein motif:HMM:NF015861.2
COORDINATES: similar to AA sequence:RefSeq:WP_013552260.1
COORDINATES: protein motif:HMM:NF025875.2
COORDINATES: similar to AA sequence:RefSeq:WP_013552258.1
COORDINATES: similar to AA sequence:RefSeq:WP_013305433.1
4Fe-4S dicluster domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019386478.1
COORDINATES: similar to AA sequence:RefSeq:WP_011585783.1
GO:0003824 - catalytic activity [Evidence IEA]
NAD-dependent epimerase/dehydratase family protein
COORDINATES: protein motif:HMM:NF013682.2
COORDINATES: similar to AA sequence:RefSeq:WP_008767243.1
COORDINATES: protein motif:HMM:TIGR02494.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0043687 - post-translational protein modification [Evidence IEA]
glycyl-radical enzyme activating protein
COORDINATES: protein motif:HMM:NF024702.2
COORDINATES: similar to AA sequence:RefSeq:WP_008467432.1
COORDINATES: similar to AA sequence:RefSeq:WP_014680956.1
COORDINATES: protein motif:HMM:NF024152.2
COORDINATES: protein motif:HMM:NF016648.2
COORDINATES: protein motif:HMM:TIGR02985.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006797838.1
GO:0030246 - carbohydrate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003003354.1
COORDINATES: similar to AA sequence:RefSeq:WP_012790090.1
GO:0005887 - integral component of plasma membrane [Evidence IEA]
GO:0051119 - sugar transmembrane transporter activity [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012692.2
COORDINATES: similar to AA sequence:RefSeq:WP_009197514.1
COORDINATES: protein motif:HMM:NF014376.2
COORDINATES: protein motif:HMM:NF039709.1
COORDINATES: similar to AA sequence:RefSeq:WP_012025033.1
GO:0003999 - adenine phosphoribosyltransferase activity [Evidence IEA]
GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012993.2
COORDINATES: similar to AA sequence:RefSeq:WP_013549924.1
COORDINATES: protein motif:HMM:NF025780.2
CdiA family toxin C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009582828.1
COORDINATES: protein motif:HMM:NF036445.2
COORDINATES: protein motif:HMM:NF027479.2
COORDINATES: similar to AA sequence:RefSeq:WP_016776224.1
GO:0016829 - lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010664748.1
COORDINATES: similar to AA sequence:RefSeq:WP_008611264.1
GO:0008697 - 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity [Evidence IEA]
GO:0045490 - pectin catabolic process [Evidence IEA]
5-dehydro-4-deoxy-D-glucuronate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_017495337.1
COORDINATES: similar to AA sequence:RefSeq:WP_013536558.1
COORDINATES: similar to AA sequence:RefSeq:WP_013551258.1
COORDINATES: protein motif:HMM:NF039702.1
COORDINATES: protein motif:HMM:NF027643.2
COORDINATES: similar to AA sequence:RefSeq:WP_009120247.1
COORDINATES: protein motif:HMM:NF033679.1
COORDINATES: protein motif:HMM:NF024120.2
COORDINATES: similar to AA sequence:RefSeq:WP_014200678.1
COORDINATES: similar to AA sequence:RefSeq:WP_009085136.1
COORDINATES: protein motif:HMM:NF021982.2
COORDINATES: protein motif:HMM:NF012422.2
COORDINATES: protein motif:HMM:NF013752.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013620519.1
COORDINATES: protein motif:HMM:TIGR04350.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015581.2
COORDINATES: similar to AA sequence:RefSeq:WP_008270358.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307177.1