Flammeovirga kamogawensis strain YS10 chromosome 2, complete sequence.
Bacteria; Bacteroidota; Cytophagia; Cytophagales; Flammeovirgaceae; Flammeovirga.
Comparative genomic studies on the polysaccharide-degrading batcterial strains of the Flammeovirga genus
Submitted (29-MAY-2021) Shandong University, National Glycoengineering Research Center, No. 72, Binhai Road, Jimo District, Qingdao, Shandong 266237, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP076129.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 01-APR-2021\nAssembly Method :: Unicycler v. 0.4.8\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 480.0x\nSequencing Technology :: PacBio; Illumina NovaSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 10/06/2022 22:59:26\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 5,396\nCDSs (total) :: 5,264\nGenes (coding) :: 5,245\nCDSs (with protein) :: 5,245\nGenes (RNA) :: 132\nrRNAs :: 10, 10, 10 (5S, 16S, 23S)\ncomplete rRNAs :: 10, 10, 10 (5S, 16S, 23S)\ntRNAs :: 99\nncRNAs :: 3\nPseudo Genes (total) :: 19\nCDSs (without protein) :: 19\nPseudo Genes (ambiguous residues) :: 0 of 19\nPseudo Genes (frameshifted) :: 1 of 19\nPseudo Genes (incomplete) :: 15 of 19\nPseudo Genes (internal stop) :: 3 of 19\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
type strain of Flammeovirga kamogawensis
COORDINATES: protein motif:HMM:TIGR00915.1
GO:0016021 - integral component of membrane [Evidence IEA]
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]; GO:0042908 - xenobiotic transport [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
multidrug efflux RND transporter permease subunit
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF019474.2
COORDINATES: similar to AA sequence:RefSeq:WP_020530007.1
COORDINATES: similar to AA sequence:RefSeq:WP_014798364.1
COORDINATES: protein motif:HMM:NF012403.2
COORDINATES: similar to AA sequence:RefSeq:WP_007655160.1
COORDINATES: similar to AA sequence:RefSeq:WP_018477114.1
COORDINATES: similar to AA sequence:RefSeq:WP_014019331.1
COORDINATES: similar to AA sequence:RefSeq:WP_014022960.1
COORDINATES: protein motif:HMM:NF024499.2
COORDINATES: similar to AA sequence:RefSeq:WP_011584058.1
COORDINATES: protein motif:HMM:NF013890.2
COORDINATES: similar to AA sequence:RefSeq:WP_008201583.1
COORDINATES: protein motif:HMM:NF017519.2
YiiX/YebB-like N1pC/P60 family cysteine hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_020527864.1
sigma-54 dependent transcriptional regulator
COORDINATES: protein motif:HMM:NF014567.2
COORDINATES: protein motif:HMM:NF024806.2
COORDINATES: similar to AA sequence:RefSeq:WP_018342133.1
COORDINATES: protein motif:HMM:NF033516.0
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF033088.2
GO:0008800 - beta-lactamase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024989.2
COORDINATES: similar to AA sequence:RefSeq:WP_002698297.1
COORDINATES: similar to AA sequence:RefSeq:WP_014772783.1
COORDINATES: similar to AA sequence:RefSeq:WP_011584721.1
COORDINATES: protein motif:HMM:NF040452.1
COORDINATES: protein motif:HMM:NF015674.2
COORDINATES: similar to AA sequence:RefSeq:WP_014021925.1
GO:0016682 - oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor [Evidence IEA]
cytochrome d ubiquinol oxidase subunit II
COORDINATES: similar to AA sequence:RefSeq:WP_020596604.1
COORDINATES: protein motif:HMM:NF013592.2
COORDINATES: protein motif:HMM:NF024587.2
COORDINATES: protein motif:HMM:NF012377.2
GO:0030246 - carbohydrate binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012593.2
dicarboxylate/amino acid:cation symporter
COORDINATES: protein motif:HMM:NF016908.2
GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025092.2
COORDINATES: protein motif:HMM:TIGR00905.1
GO:0005887 - integral component of plasma membrane [Evidence IEA]
GO:0005275 - amine transmembrane transporter activity [Evidence IEA]
GO:0015837 - amine transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF003640.0
GO:0005247 - voltage-gated chloride channel activity [Evidence IEA]
GO:0006821 - chloride transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF013444.2
COORDINATES: protein motif:HMM:NF014696.2
phophatidylserine decarboxylase associated domain-containing protein
COORDINATES: protein motif:HMM:NF012546.2
GO:0008236 - serine-type peptidase activity [Evidence IEA]
prolyl oligopeptidase family serine peptidase
COORDINATES: protein motif:HMM:NF027890.2
COORDINATES: protein motif:HMM:TIGR01845.1
COORDINATES: protein motif:HMM:NF016513.2
COORDINATES: protein motif:HMM:NF025298.2
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024905.2
COORDINATES: nucleotide motif:Rfam:14.4:RF01725
SAM-I-IV-variant riboswitch; SAM riboswitches modulate the expression of downstream genes in response to levels of S-adenosylmethionine; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:TIGR00797.1
COORDINATES: protein motif:HMM:NF002688.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0004357 - glutamate-cysteine ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006750 - glutathione biosynthetic process [Evidence IEA]
bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB
COORDINATES: protein motif:HMM:NF020123.2
COORDINATES: protein motif:HMM:NF014566.2
CPBP family intramembrane metalloprotease
COORDINATES: protein motif:HMM:NF012790.2
COORDINATES: similar to AA sequence:RefSeq:WP_017731245.1
COORDINATES: similar to AA sequence:RefSeq:WP_018617566.1
COORDINATES: protein motif:HMM:NF018877.2
COORDINATES: protein motif:HMM:NF014035.2
sulfite exporter TauE/SafE family protein
COORDINATES: protein motif:HMM:NF013117.2
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF013884.2
heparan-alpha-glucosaminide N-acetyltransferase domain-containing protein
COORDINATES: protein motif:HMM:NF016099.2
IucA/IucC family siderophore biosynthesis protein
COORDINATES: protein motif:HMM:NF024913.2
COORDINATES: protein motif:HMM:NF019310.2
COORDINATES: similar to AA sequence:RefSeq:WP_004156434.1
COORDINATES: protein motif:HMM:NF012503.2
aspartate aminotransferase family protein
COORDINATES: protein motif:HMM:NF024242.2
COORDINATES: protein motif:HMM:NF019335.2
COORDINATES: protein motif:HMM:NF025656.2
COORDINATES: protein motif:HMM:NF015863.2
PepSY-associated TM helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014022708.1
COORDINATES: protein motif:HMM:NF021028.2
mechanosensitive ion channel family protein
COORDINATES: protein motif:HMM:NF012655.2
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_020528150.1
COORDINATES: similar to AA sequence:RefSeq:WP_013454734.1
COORDINATES: similar to AA sequence:RefSeq:WP_013454735.1
COORDINATES: similar to AA sequence:RefSeq:WP_013454736.1
outer membrane lipoprotein-sorting protein
COORDINATES: protein motif:HMM:NF024180.2
GO:0016209 - antioxidant activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF022188.2
Rossmann-like and DUF2520 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013930165.1
COORDINATES: protein motif:HMM:NF016087.2
DUF2116 family Zn-ribbon domain-containing protein
COORDINATES: protein motif:HMM:NF022443.2
COORDINATES: protein motif:HMM:NF012798.2
COORDINATES: similar to AA sequence:RefSeq:WP_018341959.1
COORDINATES: protein motif:HMM:NF012958.2
COORDINATES: similar to AA sequence:RefSeq:WP_019946402.1
COORDINATES: protein motif:HMM:NF025658.2
COORDINATES: protein motif:HMM:NF024816.2
COORDINATES: protein motif:HMM:NF015506.2
COORDINATES: similar to AA sequence:RefSeq:WP_020532553.1
COORDINATES: protein motif:HMM:NF040156.1
COORDINATES: protein motif:HMM:NF024421.2
COORDINATES: protein motif:HMM:NF016764.2
COORDINATES: protein motif:HMM:NF019844.2
COORDINATES: protein motif:HMM:NF024698.2
COORDINATES: protein motif:HMM:NF020302.2
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_019943582.1
COORDINATES: protein motif:HMM:TIGR02464.1
COORDINATES: protein motif:HMM:NF033592.1
COORDINATES: protein motif:HMM:NF021537.2
predicted Zn-dependent protease with a strongly conserved HExxH motif; Derived by automated computational analysis using gene prediction method: Protein Homology.
DUF2268 domain-containing putative Zn-dependent protease
COORDINATES: protein motif:HMM:NF019468.2
COORDINATES: protein motif:HMM:TIGR01027.1
GO:0004349 - glutamate 5-kinase activity [Evidence IEA]
GO:0006561 - proline biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF001221.0
GO:0004350 - glutamate-5-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: protein motif:HMM:NF024974.2
COORDINATES: protein motif:HMM:TIGR03519.1
type IX secretion system membrane protein PorP/SprF
COORDINATES: protein motif:HMM:TIGR01180.1
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020533287.1
COORDINATES: similar to AA sequence:RefSeq:WP_015265428.1
COORDINATES: similar to AA sequence:RefSeq:WP_009185035.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0019346 - transsulfuration [Evidence IEA]
cystathionine gamma-synthase family protein
COORDINATES: protein motif:HMM:TIGR04183.1
T9SS type A sorting domain-containing protein
COORDINATES: protein motif:HMM:NF016843.2
COORDINATES: protein motif:HMM:NF009805.0
GO:0071949 - FAD binding [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0008941 - nitric oxide dioxygenase activity [Evidence IEA]; GO:0019825 - oxygen binding [Evidence IEA]
GO:0051409 - response to nitrosative stress [Evidence IEA]
COORDINATES: protein motif:HMM:NF016089.2
COORDINATES: protein motif:HMM:NF017026.2
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009183452.1
GO:0004386 - helicase activity [Evidence IEA]
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020602956.1
GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA]
rhodanese-like domain-containing protein
COORDINATES: protein motif:HMM:NF025679.2
right-handed parallel beta-helix repeat-containing protein
COORDINATES: protein motif:HMM:NF019491.2
COORDINATES: protein motif:HMM:NF012801.2
COORDINATES: protein motif:HMM:NF013122.2
COORDINATES: protein motif:HMM:NF016232.2
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: protein motif:HMM:NF012301.2
COORDINATES: protein motif:HMM:TIGR04056.1
GO:0045203 - integral component of cell outer membrane [Evidence IEA]
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0071702 - organic substance transport [Evidence IEA]
SusC/RagA family TonB-linked outer membrane protein
COORDINATES: protein motif:HMM:NF025680.2
RagB/SusD family nutrient uptake outer membrane protein
COORDINATES: protein motif:HMM:TIGR04549.1
COORDINATES: protein motif:HMM:NF025500.2
COORDINATES: protein motif:HMM:NF012862.2
COORDINATES: protein motif:HMM:NF025217.2
methyltransferase domain-containing protein
COORDINATES: protein motif:HMM:NF016241.2
COORDINATES: protein motif:HMM:NF013080.2
COORDINATES: protein motif:HMM:NF013646.2
COORDINATES: similar to AA sequence:RefSeq:WP_015029793.1
COORDINATES: protein motif:HMM:NF019988.2
COORDINATES: protein motif:HMM:NF013226.2
COORDINATES: similar to AA sequence:RefSeq:WP_009583456.1
COORDINATES: protein motif:HMM:NF023390.2
COORDINATES: protein motif:HMM:NF024724.2
COORDINATES: protein motif:HMM:NF019042.2
COORDINATES: protein motif:HMM:NF013155.2
COORDINATES: protein motif:HMM:TIGR01730.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: protein motif:HMM:NF013069.2
COORDINATES: protein motif:HMM:NF024676.2
COORDINATES: protein motif:HMM:NF013283.2
COORDINATES: protein motif:HMM:NF019533.2
COORDINATES: protein motif:HMM:NF019581.2
COORDINATES: protein motif:HMM:NF036614.2
COORDINATES: protein motif:HMM:NF013056.2
COORDINATES: protein motif:HMM:NF039670.1
COORDINATES: protein motif:HMM:NF026018.2
polysaccharide biosynthesis C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF012894.2
COORDINATES: protein motif:HMM:NF037016.2
gliding motility-associated C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF025025.2
COORDINATES: protein motif:HMM:NF012745.2
COORDINATES: similar to AA sequence:RefSeq:WP_013929072.1
COORDINATES: protein motif:HMM:NF025072.2
COORDINATES: similar to AA sequence:RefSeq:WP_020533008.1
COORDINATES: protein motif:HMM:NF019846.2
COORDINATES: protein motif:HMM:NF012744.2
COORDINATES: protein motif:HMM:NF014385.2
COORDINATES: protein motif:HMM:NF016800.2
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF014453.2
COORDINATES: protein motif:HMM:TIGR04456.1
COORDINATES: protein motif:HMM:NF012372.2
COORDINATES: similar to AA sequence:RefSeq:WP_008198134.1
GO:0008988 - rRNA (adenine-N6-)-methyltransferase activity [Evidence IEA]
GO:0006364 - rRNA processing [Evidence IEA]
23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF
COORDINATES: protein motif:HMM:NF003877.0
GO:0004427 - inorganic diphosphate phosphatase activity [Evidence IEA]
manganese-dependent inorganic pyrophosphatase
LytTR family DNA-binding domain-containing protein
COORDINATES: protein motif:HMM:NF018305.2
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF022750.2
COORDINATES: protein motif:HMM:NF016150.2
COORDINATES: protein motif:HMM:NF019321.2
COORDINATES: protein motif:HMM:NF019320.2
heme NO-binding domain-containing protein
COORDINATES: protein motif:HMM:NF037701.2
COORDINATES: similar to AA sequence:RefSeq:WP_009579783.1
COORDINATES: protein motif:HMM:NF016535.2
COORDINATES: protein motif:HMM:NF024515.2
COORDINATES: protein motif:HMM:NF012422.2
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
LuxR C-terminal-related transcriptional regulator
carboxypeptidase-like regulatory domain-containing protein
COORDINATES: protein motif:HMM:NF012696.2
COORDINATES: protein motif:HMM:NF012925.2
COORDINATES: protein motif:HMM:NF019592.2
COORDINATES: similar to AA sequence:RefSeq:WP_018475170.1
COORDINATES: protein motif:HMM:NF014850.2
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020533150.1
COORDINATES: similar to AA sequence:RefSeq:WP_018620099.1
COORDINATES: protein motif:HMM:NF013088.2
Crp/Fnr family transcriptional regulator
COORDINATES: protein motif:HMM:NF013228.2
COORDINATES: protein motif:HMM:TIGR01297.1
GO:0008324 - cation transmembrane transporter activity [Evidence IEA]; GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO:0006812 - cation transport [Evidence IEA]
cation diffusion facilitator family transporter
COORDINATES: protein motif:HMM:NF018561.2
COORDINATES: protein motif:HMM:NF024978.2
COORDINATES: protein motif:HMM:NF026913.2
COORDINATES: protein motif:HMM:NF020904.2
COORDINATES: protein motif:HMM:NF025771.2
COORDINATES: protein motif:HMM:NF019227.2
polymorphic toxin-type HINT domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014798632.1
Rpn family recombination-promoting nuclease/putative transposase
COORDINATES: protein motif:HMM:NF025918.2
COORDINATES: protein motif:HMM:TIGR02959.1
COORDINATES: protein motif:HMM:NF024863.2
GDSL-type esterase/lipase family protein
COORDINATES: protein motif:HMM:NF024194.2
COORDINATES: protein motif:HMM:NF025792.2
COORDINATES: similar to AA sequence:RefSeq:WP_020527008.1
COORDINATES: similar to AA sequence:RefSeq:WP_020527009.1
PorP/SprF family type IX secretion system membrane protein
COORDINATES: protein motif:HMM:NF025224.2
leucine-rich repeat domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015330334.1
COORDINATES: protein motif:HMM:NF015531.2
helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF018448.2
threonine/serine exporter family protein
COORDINATES: protein motif:HMM:TIGR01509.1
GO:0016787 - hydrolase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016300.2
The SIMPL domain is named for its presence in mouse protein SIMPL (signalling molecule that associates with mouse pelle-like kinase). Bacterial member BP26, from Brucella, was shown to assemble into a channel-like structure, while YggE from E. coli has been associated with resistance to oxidative stress; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024950.2
COORDINATES: protein motif:HMM:NF015431.2
COORDINATES: protein motif:HMM:NF019315.2
COORDINATES: protein motif:HMM:NF022307.2
COORDINATES: similar to AA sequence:RefSeq:WP_009184812.1
COORDINATES: protein motif:HMM:NF014867.2
COORDINATES: protein motif:HMM:NF015552.2
COORDINATES: similar to AA sequence:RefSeq:WP_002693194.1
GO:0003824 - catalytic activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012382.2
GO:0009058 - biosynthetic process [Evidence IEA]
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_019945667.1
GO:0016880 - acid-ammonia (or amide) ligase activity [Evidence IEA]
adenosylcobinamide-phosphate synthase CbiB
COORDINATES: protein motif:HMM:NF024911.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF013426.2
(2Fe-2S) ferredoxin domain-containing protein
COORDINATES: protein motif:HMM:NF013530.2
NAD-dependent epimerase/dehydratase family protein
COORDINATES: protein motif:HMM:NF014016.2
COORDINATES: protein motif:HMM:TIGR01467.1
GO:0030788 - precorrin-2 C20-methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01466.1
GO:0030789 - precorrin-3B C17-methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02467.1
GO:0046025 - precorrin-6Y C5,15-methyltransferase (decarboxylating) activity [Evidence IEA]
GO:0046140 - corrin biosynthetic process [Evidence IEA]
precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE
COORDINATES: protein motif:HMM:TIGR01465.1
GO:0046026 - precorrin-4 C11-methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00715.1
GO:0016994 - precorrin-6A reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF000849.0
cobalt-precorrin-5B (C(1))-methyltransferase CbiD
COORDINATES: protein motif:HMM:NF014713.2
COORDINATES: protein motif:HMM:NF012234.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014351.2
bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase
COORDINATES: protein motif:HMM:TIGR00379.1
GO:0042242 - cobyrinic acid a,c-diamide synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002694792.1
GO:0008817 - cob(I)yrinic acid a,c-diamide adenosyltransferase activity [Evidence IEA]
cob(I)yrinic acid a,c-diamide adenosyltransferase
COORDINATES: protein motif:HMM:TIGR02475.1
COORDINATES: protein motif:HMM:TIGR02257.1
GO:0051116 - cobaltochelatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF005499.0
GO:0016829 - lyase activity [Evidence IEA]
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase
COORDINATES: protein motif:HMM:NF012515.2
COORDINATES: protein motif:HMM:NF037292.2
COORDINATES: similar to AA sequence:RefSeq:WP_014022098.1
COORDINATES: similar to AA sequence:RefSeq:WP_020530273.1
COORDINATES: similar to AA sequence:RefSeq:WP_018475178.1
COORDINATES: similar to AA sequence:RefSeq:WP_018475179.1
mandelate racemase/muconate lactonizing enzyme family protein
COORDINATES: similar to AA sequence:RefSeq:WP_020530276.1
GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011575334.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_009282044.1
alcohol dehydrogenase catalytic domain-containing protein
COORDINATES: protein motif:HMM:NF014851.2
COORDINATES: protein motif:HMM:NF015387.2
iron-sulfur cluster biosynthesis family protein
COORDINATES: protein motif:HMM:NF014522.2
COORDINATES: similar to AA sequence:RefSeq:WP_020526188.1
COORDINATES: protein motif:HMM:NF024812.2
COORDINATES: protein motif:HMM:NF001299.0
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000210 - NAD+ diphosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF040138.1
COORDINATES: similar to AA sequence:RefSeq:WP_018341509.1
COORDINATES: protein motif:HMM:NF014147.2
COORDINATES: protein motif:HMM:NF013961.2
COORDINATES: protein motif:HMM:NF013508.2
COORDINATES: protein motif:HMM:NF040322.1
endonuclease/exonuclease/phosphatase family protein
COORDINATES: protein motif:HMM:NF040146.1
COORDINATES: protein motif:HMM:NF017393.2
COORDINATES: protein motif:HMM:NF024829.2
HlyD family efflux transporter periplasmic adaptor subunit
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: similar to AA sequence:RefSeq:WP_015264929.1
COORDINATES: protein motif:HMM:NF020076.2
COORDINATES: similar to AA sequence:RefSeq:WP_008630819.1
COORDINATES: protein motif:HMM:NF022338.2
COORDINATES: similar to AA sequence:RefSeq:WP_015264716.1
GO:0022900 - electron transport chain [Evidence IEA]
cytochrome c nitrite reductase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_009186445.1
ammonia-forming cytochrome c nitrite reductase
COORDINATES: protein motif:HMM:NF013725.2
GO:0020037 - heme binding [Evidence IEA]
GO:0017004 - cytochrome complex assembly [Evidence IEA]
TerB family tellurite resistance protein
COORDINATES: protein motif:HMM:NF025268.2
COORDINATES: protein motif:HMM:TIGR00836.1
COORDINATES: protein motif:HMM:NF013104.2
COORDINATES: protein motif:HMM:NF010070.0
GO:0047632 - agmatine deiminase activity [Evidence IEA]
GO:0009446 - putrescine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013926590.1
GO:0050126 - N-carbamoylputrescine amidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014573.2
COORDINATES: protein motif:HMM:NF039178.1
COORDINATES: protein motif:HMM:NF024627.2
COORDINATES: similar to AA sequence:RefSeq:WP_015265266.1
COORDINATES: similar to AA sequence:RefSeq:WP_008627809.1
COORDINATES: similar to AA sequence:RefSeq:WP_002704620.1
COORDINATES: protein motif:HMM:NF013756.2
COORDINATES: protein motif:HMM:NF016121.2
glycoside hydrolase family 71/99-like protein
COORDINATES: protein motif:HMM:NF012376.2
COORDINATES: protein motif:HMM:NF037015.2
COORDINATES: protein motif:HMM:NF012271.2
GO:0005515 - protein binding [Evidence IEA]
fibronectin type III domain-containing protein
COORDINATES: protein motif:HMM:NF026034.2
COORDINATES: protein motif:HMM:NF025665.2
glycoside hydrolase family 99-like domain-containing protein
COORDINATES: protein motif:HMM:NF024152.2
SusD/RagB family nutrient-binding outer membrane lipoprotein
COORDINATES: similar to AA sequence:RefSeq:WP_008202544.1
COORDINATES: protein motif:HMM:TIGR03696.1
COORDINATES: protein motif:HMM:NF025304.2
COORDINATES: similar to AA sequence:RefSeq:WP_018344868.1
COORDINATES: protein motif:HMM:NF019348.2
COORDINATES: protein motif:HMM:NF021352.2
COORDINATES: protein motif:HMM:NF024777.2
COORDINATES: similar to AA sequence:RefSeq:WP_009578461.1
COORDINATES: similar to AA sequence:RefSeq:WP_009197554.1
COORDINATES: protein motif:HMM:NF024116.2
COORDINATES: protein motif:HMM:NF014717.2
COORDINATES: similar to AA sequence:RefSeq:WP_018620889.1
COORDINATES: protein motif:HMM:NF025943.2
COORDINATES: protein motif:HMM:NF025851.2
glycoside hydrolase N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF018178.2
COORDINATES: similar to AA sequence:RefSeq:WP_018472155.1
COORDINATES: protein motif:HMM:NF013998.2
COORDINATES: similar to AA sequence:RefSeq:WP_015330228.1
COORDINATES: protein motif:HMM:NF021615.2
glycerophosphoryl diester phosphodiesterase membrane domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017733214.1
COORDINATES: protein motif:HMM:NF018028.2
COORDINATES: protein motif:HMM:NF013524.2
GO:0008234 - cysteine-type peptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024702.2
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: protein motif:HMM:NF024573.2
COORDINATES: protein motif:HMM:TIGR01413.1
COORDINATES: similar to AA sequence:RefSeq:WP_013453456.1
COORDINATES: protein motif:HMM:NF002938.0
GO:0018786 - haloalkane dehalogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019311.2
COORDINATES: similar to AA sequence:RefSeq:WP_009284129.1
COORDINATES: protein motif:HMM:NF019556.2
COORDINATES: protein motif:HMM:NF014116.2
GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]
carbohydrate binding domain-containing protein
COORDINATES: protein motif:HMM:NF014427.2
COORDINATES: similar to AA sequence:RefSeq:WP_014798622.1
COORDINATES: protein motif:HMM:NF012869.2
peptidase domain-containing ABC transporter
COORDINATES: protein motif:HMM:NF012427.2
COORDINATES: protein motif:HMM:NF017000.2
COORDINATES: similar to AA sequence:RefSeq:WP_008200818.1
type II CAAX endopeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012930890.1
COORDINATES: similar to AA sequence:RefSeq:WP_002696825.1
succinylglutamate desuccinylase/aspartoacylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002696824.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
30S ribosomal protein S6--L-glutamate ligase
COORDINATES: similar to AA sequence:RefSeq:WP_002696823.1
COORDINATES: similar to AA sequence:RefSeq:WP_018343625.1
COORDINATES: similar to AA sequence:RefSeq:WP_009582193.1
COORDINATES: protein motif:HMM:NF012318.2
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012929082.1
COORDINATES: similar to AA sequence:RefSeq:WP_013455053.1
serine hydrolase domain-containing protein
COORDINATES: protein motif:HMM:NF025420.2
COORDINATES: similar to AA sequence:RefSeq:WP_019598113.1
COORDINATES: protein motif:HMM:NF012343.2
COORDINATES: similar to AA sequence:RefSeq:WP_019600098.1
hexameric tyrosine-coordinated heme protein
COORDINATES: similar to AA sequence:RefSeq:WP_018473821.1
hybrid sensor histidine kinase/response regulator transcription factor
COORDINATES: protein motif:HMM:NF022142.2
COORDINATES: similar to AA sequence:RefSeq:WP_007654563.1
phosphoribosylformylglycinamidine synthase
COORDINATES: protein motif:HMM:NF015914.2
COORDINATES: protein motif:HMM:NF037510.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013579.2
GO:0006304 - DNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013453530.1
class I SAM-dependent DNA methyltransferase
COORDINATES: protein motif:HMM:NF012492.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF038336.1
COORDINATES: protein motif:HMM:NF012517.2
LLM class flavin-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_020532147.1
COORDINATES: protein motif:HMM:NF036578.2
alpha-L-rhamnosidase N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF019136.2
triple tyrosine motif-containing protein
COORDINATES: protein motif:HMM:NF021596.2
COORDINATES: protein motif:HMM:NF011678.0
COORDINATES: protein motif:HMM:NF006718.0
GO:0003747 - translation release factor activity [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB
COORDINATES: protein motif:HMM:NF012415.2
COORDINATES: similar to AA sequence:RefSeq:WP_019596756.1
GO:0003864 - 3-methyl-2-oxobutanoate hydroxymethyltransferase activity [Evidence IEA]
GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
3-methyl-2-oxobutanoate hydroxymethyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_002704587.1
COORDINATES: protein motif:HMM:NF012955.2
guanitoxin biosynthesis MBL fold metallo-hydrolase GntH
COORDINATES: protein motif:HMM:NF024273.2
GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
GO:0009410 - response to xenobiotic stimulus [Evidence IEA]; GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020526468.1
COORDINATES: protein motif:HMM:NF014376.2
COORDINATES: similar to AA sequence:RefSeq:WP_012928546.1
GO:0003950 - NAD+ ADP-ribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024599.2
TonB-dependent receptor plug domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018474225.1
alpha-ketoglutarate-dependent dioxygenase AlkB
COORDINATES: protein motif:HMM:NF016356.2
COORDINATES: protein motif:HMM:TIGR00071.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF016060.2
COORDINATES: protein motif:HMM:TIGR00383.1
GO:0015087 - cobalt ion transmembrane transporter activity [Evidence IEA]; GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0006824 - cobalt ion transport [Evidence IEA]; GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF015722.2
SUMF1/EgtB/PvdO family nonheme iron enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_019944146.1
COORDINATES: similar to AA sequence:RefSeq:WP_015264383.1
COORDINATES: protein motif:HMM:NF012961.2
COORDINATES: protein motif:HMM:NF025053.2
protein phosphatase 2C domain-containing protein
COORDINATES: protein motif:HMM:NF019265.2
sigma-70 family RNA polymerase sigma factor
COORDINATES: protein motif:HMM:NF012298.2
COORDINATES: protein motif:HMM:NF024847.2
COORDINATES: protein motif:HMM:NF036804.2
COORDINATES: protein motif:HMM:NF014600.2
ParB/Srx family N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF024252.2
COORDINATES: protein motif:HMM:NF013235.2
COORDINATES: protein motif:HMM:NF014273.2
ParB/RepB/Spo0J family partition protein
COORDINATES: protein motif:HMM:NF018290.2
COORDINATES: protein motif:HMM:NF024784.2
COORDINATES: protein motif:HMM:NF025054.2
COORDINATES: protein motif:HMM:TIGR00710.1
COORDINATES: protein motif:HMM:NF014502.2
GO:0009341 - beta-galactosidase complex [Evidence IEA]
GO:0004565 - beta-galactosidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020533155.1
COORDINATES: similar to AA sequence:RefSeq:WP_018476005.1
COORDINATES: similar to AA sequence:RefSeq:WP_018476004.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016894.2
COORDINATES: similar to AA sequence:RefSeq:WP_018476002.1
COORDINATES: similar to AA sequence:RefSeq:WP_013454000.1
COORDINATES: similar to AA sequence:RefSeq:WP_009392382.1
COORDINATES: protein motif:HMM:NF012792.2
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
OB-fold nucleic acid binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015266638.1
COORDINATES: protein motif:HMM:NF025650.2
COORDINATES: protein motif:HMM:NF019365.2
COORDINATES: protein motif:HMM:NF016497.2
GO:0015926 - glucosidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009577569.1
GO:0016831 - carboxy-lyase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0019752 - carboxylic acid metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013798.2
COORDINATES: protein motif:HMM:NF013126.2
COORDINATES: protein motif:HMM:TIGR01200.1
COORDINATES: protein motif:HMM:NF013799.2
COORDINATES: similar to AA sequence:RefSeq:WP_019991281.1
COORDINATES: protein motif:HMM:NF039936.1
COORDINATES: similar to AA sequence:RefSeq:WP_018342573.1
COORDINATES: protein motif:HMM:NF016994.2
GO:0046677 - response to antibiotic [Evidence IEA]
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024181.2
glycoside hydrolase family 3 C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF027363.2
COORDINATES: protein motif:HMM:NF021622.2
COORDINATES: protein motif:HMM:NF013995.2
COORDINATES: similar to AA sequence:RefSeq:WP_015268142.1
type I restriction endonuclease subunit R
COORDINATES: protein motif:HMM:NF012451.2
COORDINATES: similar to AA sequence:RefSeq:WP_019599906.1
GO:0015666 - restriction endodeoxyribonuclease activity [Evidence IEA]; GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]; GO:0009307 - DNA restriction-modification system [Evidence IEA]
type I restriction-modification system subunit M
COORDINATES: protein motif:HMM:NF013548.2
COORDINATES: protein motif:HMM:NF014025.2
COORDINATES: protein motif:HMM:NF012356.2
COORDINATES: protein motif:HMM:NF013239.2
COORDINATES: protein motif:HMM:NF014926.2
COORDINATES: protein motif:HMM:NF013775.2
aminoglycoside phosphotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013407286.1
COORDINATES: protein motif:HMM:NF012692.2
COORDINATES: protein motif:HMM:NF027594.2
COORDINATES: similar to AA sequence:RefSeq:WP_013343673.1
GO:0008743 - L-threonine 3-dehydrogenase activity [Evidence IEA]
GO:0006567 - threonine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013455814.1
GO:0008890 - glycine C-acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012678.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017206.2
COORDINATES: protein motif:HMM:NF024895.2
COORDINATES: protein motif:HMM:NF012523.2
COORDINATES: protein motif:HMM:NF022143.2
GO:0071704 - organic substance metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019989789.1
COORDINATES: similar to AA sequence:RefSeq:WP_014796507.1
GO:0015250 - water channel activity [Evidence IEA]
GO:0006833 - water transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF015585.2
COORDINATES: protein motif:HMM:NF023568.2
COORDINATES: protein motif:HMM:NF015094.2
COORDINATES: protein motif:HMM:NF039201.1
COORDINATES: protein motif:HMM:NF027641.2
COORDINATES: protein motif:HMM:NF022039.2
COORDINATES: protein motif:HMM:NF037085.2
COORDINATES: similar to AA sequence:RefSeq:WP_020526150.1
COORDINATES: protein motif:HMM:NF012437.2
adenylate/guanylate cyclase domain-containing protein
COORDINATES: protein motif:HMM:NF040152.1
GO:0019867 - outer membrane [Evidence IEA]
COORDINATES: protein motif:HMM:NF018659.2
SdiA-regulated domain-containing protein
COORDINATES: protein motif:HMM:NF013718.2
COORDINATES: similar to AA sequence:RefSeq:WP_014021939.1
COORDINATES: protein motif:HMM:NF026255.2
COORDINATES: similar to AA sequence:RefSeq:WP_020527059.1
COORDINATES: similar to AA sequence:RefSeq:WP_020527060.1
COORDINATES: protein motif:HMM:NF039744.1
COORDINATES: similar to AA sequence:RefSeq:WP_009195109.1
COORDINATES: similar to AA sequence:RefSeq:WP_009195108.1
COORDINATES: similar to AA sequence:RefSeq:WP_020606264.1
COORDINATES: protein motif:HMM:NF008746.0
GO:0000175 - 3'-5'-exoribonuclease activity [Evidence IEA]; GO:0008852 - exodeoxyribonuclease I activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
Derived by automated computational analysis using gene prediction method: cmsearch.
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: protein motif:HMM:NF014533.2
GO:0009294 - DNA-mediated transformation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008200771.1
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase
COORDINATES: protein motif:HMM:NF015953.2
COORDINATES: similar to AA sequence:RefSeq:WP_008623477.1
COORDINATES: protein motif:HMM:NF024900.2
2Fe-2S iron-sulfur cluster-binding protein
COORDINATES: protein motif:HMM:NF021231.2
COORDINATES: protein motif:HMM:NF015284.2
L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha
COORDINATES: protein motif:HMM:NF012334.2
COORDINATES: similar to AA sequence:RefSeq:WP_014020529.1
COORDINATES: similar to AA sequence:RefSeq:WP_020596107.1
NAD-dependent succinate-semialdehyde dehydrogenase
COORDINATES: protein motif:HMM:NF012470.2
COORDINATES: protein motif:HMM:NF013957.2
GO:0004866 - endopeptidase inhibitor activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014543.2
COORDINATES: similar to AA sequence:RefSeq:WP_011586113.1
COORDINATES: protein motif:HMM:NF024371.2
transglutaminase-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008623281.1
4Fe-4S dicluster domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017841868.1
COORDINATES: similar to AA sequence:RefSeq:WP_008623277.1
GO:0009055 - electron transfer activity [Evidence IEA]
RnfABCDGE type electron transport complex subunit A
COORDINATES: similar to AA sequence:RefSeq:WP_008623275.1
COORDINATES: similar to AA sequence:RefSeq:WP_008623274.1
COORDINATES: similar to AA sequence:RefSeq:WP_008623273.1
RnfABCDGE type electron transport complex subunit D
COORDINATES: similar to AA sequence:RefSeq:WP_008623272.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008623271.1
GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors [Evidence IEA]
2-oxoacid:acceptor oxidoreductase family protein
COORDINATES: protein motif:HMM:NF040196.1
COORDINATES: protein motif:HMM:NF016176.2
COORDINATES: similar to AA sequence:RefSeq:WP_020605351.1
GO:0004124 - cysteine synthase activity [Evidence IEA]
GO:0006535 - cysteine biosynthetic process from serine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013926454.1
COORDINATES: similar to AA sequence:RefSeq:WP_019991191.1
COORDINATES: protein motif:HMM:NF028476.2
COORDINATES: protein motif:HMM:NF024742.2
COORDINATES: protein motif:HMM:NF002937.0
GO:0030729 - acetoacetate-CoA ligase activity [Evidence IEA]
GO:0019287 - isopentenyl diphosphate biosynthetic process, mevalonate pathway [Evidence IEA]
COORDINATES: protein motif:HMM:NF017927.2
COORDINATES: protein motif:HMM:TIGR00687.1
GO:0008478 - pyridoxal kinase activity [Evidence IEA]
GO:0009443 - pyridoxal 5'-phosphate salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014774097.1
GO:0015116 - sulfate transmembrane transporter activity [Evidence IEA]
GO:0008272 - sulfate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013454771.1
COORDINATES: similar to AA sequence:RefSeq:WP_008627915.1
COORDINATES: protein motif:HMM:NF013357.2
GO:0003796 - lysozyme activity [Evidence IEA]
GO:0016998 - cell wall macromolecule catabolic process [Evidence IEA]; GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009195341.1
COORDINATES: protein motif:HMM:NF025273.2
COORDINATES: similar to AA sequence:RefSeq:WP_017733980.1
YeeE/YedE thiosulfate transporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017733979.1
COORDINATES: protein motif:HMM:NF019604.2
COORDINATES: protein motif:HMM:NF018884.2
COORDINATES: protein motif:HMM:TIGR00106.1
RHS repeat-associated core domain-containing protein
COORDINATES: protein motif:HMM:NF008277.0
COORDINATES: similar to AA sequence:RefSeq:WP_017729999.1
GO:0003978 - UDP-glucose 4-epimerase activity [Evidence IEA]
GO:0006012 - galactose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009195126.1
GO:0008108 - UDP-glucose:hexose-1-phosphate uridylyltransferase activity [Evidence IEA]
UDP-glucose--hexose-1-phosphate uridylyltransferase
COORDINATES: protein motif:HMM:TIGR00131.1
GO:0004335 - galactokinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012742.2
LacI family DNA-binding transcriptional regulator
COORDINATES: protein motif:HMM:NF024583.2
COORDINATES: similar to AA sequence:RefSeq:WP_014021516.1
COORDINATES: protein motif:HMM:NF012673.2
COORDINATES: similar to AA sequence:RefSeq:WP_013452528.1
COORDINATES: protein motif:HMM:NF022072.2
COORDINATES: protein motif:HMM:NF013866.2
COORDINATES: protein motif:HMM:NF015060.2
COORDINATES: protein motif:HMM:NF015916.2
GO:0008092 - cytoskeletal protein binding [Evidence IEA]; GO:0042802 - identical protein binding [Evidence IEA]; GO:0030674 - protein-macromolecule adaptor activity [Evidence IEA]; GO:0043130 - ubiquitin binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019596006.1
COORDINATES: similar to AA sequence:RefSeq:WP_009185040.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
sigma 54-interacting transcriptional regulator
COORDINATES: protein motif:HMM:NF012711.2
COORDINATES: similar to AA sequence:RefSeq:WP_018618723.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
DNA-directed RNA polymerase subunit alpha