Budorcas taxicolor isolate Tak-1 chromosome 24, Takin1.1, whole genome shotgun sequence.
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Budorcas.
REFSEQ INFORMATION: The reference sequence is identical to\nCM041252.1.\nAssembly name: Takin1.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Northwest A&F University on\n2022/04/22. The original whole-genome shotgun project has the\naccession JAKGDW000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Northwest A&F University\nAssembly Date :: 20-OCT-2021\nAssembly Method :: hifiasm v. 0.13\nAssembly Name :: Takin1.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 24.0x\nSequencing Technology :: PacBio Sequel; Illumina NovaSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Updated annotation\nAnnotation Name :: GCF_023091745.1-RS_2023_02\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Gnomon; cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 02/25/2023\n##Genome-Annotation-Data-END##
uncharacterized LOC128068420; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.6:RF00001
Derived by automated computational analysis using gene prediction method: cmsearch.
frizzled-3-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins
glutamate rich 1; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
DLG associated protein 2; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
CLN8 transmembrane ER and ERGIC protein; Derived by automated computational analysis using gene prediction method: Gnomon.
CLN8 transmembrane ER and ERGIC protein, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
CLN8 transmembrane ER and ERGIC protein, transcript variant X1
CLN8 transmembrane ER and ERGIC protein, transcript variant X2
transfer RNA tryptophan (anticodon CCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Rho guanine nucleotide exchange factor 10; Derived by automated computational analysis using gene prediction method: Gnomon.
Rho guanine nucleotide exchange factor 10
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
kelch repeat and BTB domain containing 11; Derived by automated computational analysis using gene prediction method: Gnomon.
kelch repeat and BTB domain containing 11
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
kelch repeat and BTB domain-containing protein 11
myomesin 2; Derived by automated computational analysis using gene prediction method: Gnomon.
COORDINATES: polyA evidence [ECO:0006239]
microfibrillar-associated protein 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
microfibrillar-associated protein 1-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: microfibrillar-associated protein 1-like
CUB and Sushi multiple domains 1; Derived by automated computational analysis using gene prediction method: Gnomon.
CUB and sushi domain-containing protein 1
transfer RNA serine (anticodon GGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
protein MEMO1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
transfer RNA cysteine (anticodon GCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
ubiquitin thioesterase OTUB1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
transfer RNA glycine (anticodon CCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
microcephalin 1; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
angiopoietin 2; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
60S acidic ribosomal protein P0-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins
uncharacterized LOC128068340; Derived by automated computational analysis using gene prediction method: Gnomon.
U6 spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.6:RF00026
1-acylglycerol-3-phosphate O-acyltransferase 5; Derived by automated computational analysis using gene prediction method: Gnomon.
1-acylglycerol-3-phosphate O-acyltransferase 5, transcript variant X1
1-acylglycerol-3-phosphate O-acyltransferase 5, transcript variant X2
1-acyl-sn-glycerol-3-phosphate acyltransferase epsilon
XK related 5; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger protein 596-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
sperm-associated antigen 11B-like; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128068174; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger protein 705A-like; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger protein 705A-like, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
zinc finger protein 705A-like, transcript variant X1
zinc finger protein 705A-like, transcript variant X4
zinc finger protein 705A-like, transcript variant X2
zinc finger protein 705A-like, transcript variant X6
zinc finger protein 705A-like, transcript variant X3
zinc finger protein 705A-like isoform X1
zinc finger protein 705A-like isoform X3
zinc finger protein 678-like; Derived by automated computational analysis using gene prediction method: Gnomon.
ubiquitin carboxyl-terminal hydrolase 17-like protein 6; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
zinc finger protein 239-like; Derived by automated computational analysis using gene prediction method: Gnomon.
putative protein FAM90A13P; Derived by automated computational analysis using gene prediction method: Gnomon.
putative protein FAM90A15P; Derived by automated computational analysis using gene prediction method: Gnomon.
beta-defensin 109-like; Derived by automated computational analysis using gene prediction method: Gnomon.
glycoprotein M6A; Derived by automated computational analysis using gene prediction method: Gnomon.
WD repeat domain 17; Derived by automated computational analysis using gene prediction method: Gnomon.
spermatogenesis associated 4; Derived by automated computational analysis using gene prediction method: Gnomon.
ankyrin repeat and SOCS box containing 5; Derived by automated computational analysis using gene prediction method: Gnomon.
ankyrin repeat and SOCS box containing 5
signal peptidase complex subunit 3; Derived by automated computational analysis using gene prediction method: Gnomon.
vascular endothelial growth factor C; Derived by automated computational analysis using gene prediction method: Gnomon.
eukaryotic translation initiation factor 3 subunit C-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins
nei like DNA glycosylase 3; Derived by automated computational analysis using gene prediction method: Gnomon.
aspartylglucosaminidase; Derived by automated computational analysis using gene prediction method: Gnomon.
ribonuclease H1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
tigger transposable element-derived protein 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
small nucleolar RNA SNORD22; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.6:RF00099
dnaJ homolog subfamily A member 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
teneurin transmembrane protein 3; Derived by automated computational analysis using gene prediction method: Gnomon.
transfer RNA lysine (anticodon UUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
dCMP deaminase; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
WW and C2 domain containing 2; Derived by automated computational analysis using gene prediction method: Gnomon.
claudin-22-like; Derived by automated computational analysis using gene prediction method: Gnomon.
putative claudin-24; Derived by automated computational analysis using gene prediction method: Gnomon.
condensin-2 complex subunit H2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
CDKN2A interacting protein; Derived by automated computational analysis using gene prediction method: Gnomon.
CDKN2A interacting protein, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
CDKN2A interacting protein, transcript variant X2
inhibitor of growth family member 2; Derived by automated computational analysis using gene prediction method: Gnomon.
RWD domain containing 4; Derived by automated computational analysis using gene prediction method: Gnomon.
RWD domain containing 4, transcript variant X1
RWD domain containing 4, transcript variant X2
RWD domain-containing protein 4 isoform X1
RWD domain-containing protein 4 isoform X2
trafficking protein particle complex subunit 11; Derived by automated computational analysis using gene prediction method: Gnomon.
trafficking protein particle complex subunit 11, transcript variant X1
trafficking protein particle complex subunit 11, transcript variant X2
trafficking protein particle complex subunit 11 isoform X1
trafficking protein particle complex subunit 11 isoform X2
storkhead box 2; Derived by automated computational analysis using gene prediction method: Gnomon.
ectonucleotide pyrophosphatase/phosphodiesterase 6; Derived by automated computational analysis using gene prediction method: Gnomon.
ectonucleotide pyrophosphatase/phosphodiesterase 6
glycerophosphocholine cholinephosphodiesterase ENPP6
interferon regulatory factor 2; Derived by automated computational analysis using gene prediction method: Gnomon.
caspase 3; Derived by automated computational analysis using gene prediction method: Gnomon.
primase and DNA directed polymerase; Derived by automated computational analysis using gene prediction method: Gnomon.
60S ribosomal protein L26-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins
centromere protein U; Derived by automated computational analysis using gene prediction method: Gnomon.
centromere protein U, transcript variant X2
centromere protein U, transcript variant X1
acyl-CoA synthetase long chain family member 1; Derived by automated computational analysis using gene prediction method: Gnomon.
acyl-CoA synthetase long chain family member 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins
acyl-CoA synthetase long chain family member 1, transcript variant X1
long-chain-fatty-acid--CoA ligase 1 isoform X1
long-chain-fatty-acid--CoA ligase 1 isoform X2
transfer RNA cysteine (anticodon ACA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
voltage-dependent anion-selective channel protein 3-like; Derived by automated computational analysis using gene prediction method: Gnomon.
helt bHLH transcription factor; Derived by automated computational analysis using gene prediction method: Gnomon.
hairy and enhancer of split-related protein HELT
solute carrier family 25 member 4; Derived by automated computational analysis using gene prediction method: Gnomon.
cilia and flagella associated protein 97; Derived by automated computational analysis using gene prediction method: Gnomon.
cilia and flagella associated protein 97
cilia- and flagella-associated protein 97
sorting nexin 25; Derived by automated computational analysis using gene prediction method: Gnomon.
LRP2 binding protein; Derived by automated computational analysis using gene prediction method: Gnomon.
ankyrin repeat domain 37; Derived by automated computational analysis using gene prediction method: Gnomon.
ankyrin repeat domain 37, transcript variant X1
ankyrin repeat domain 37, transcript variant X2
ankyrin repeat domain 37, transcript variant X4
ankyrin repeat domain 37, transcript variant X3
ankyrin repeat domain-containing protein 37 isoform X2
ankyrin repeat domain-containing protein 37 isoform X1
ankyrin repeat domain-containing protein 37 isoform X4
ankyrin repeat domain-containing protein 37 isoform X3
UFM1 specific peptidase 2; Derived by automated computational analysis using gene prediction method: Gnomon.
chromosome 24 C4orf47 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
coiled-coil domain containing 110; Derived by automated computational analysis using gene prediction method: Gnomon.
coiled-coil domain-containing protein 110
PDZ and LIM domain 3; Derived by automated computational analysis using gene prediction method: Gnomon.
PDZ and LIM domain 3, transcript variant X2
PDZ and LIM domain 3, transcript variant X1
sorbin and SH3 domain containing 2; Derived by automated computational analysis using gene prediction method: Gnomon.
sorbin and SH3 domain-containing protein 2
uncharacterized LOC128068187; Derived by automated computational analysis using gene prediction method: Gnomon.
toll like receptor 3; Derived by automated computational analysis using gene prediction method: Gnomon.
family with sequence similarity 149 member A; Derived by automated computational analysis using gene prediction method: Gnomon.
family with sequence similarity 149 member A
cytochrome P450 4V2; Derived by automated computational analysis using gene prediction method: Gnomon.
kallikrein B1; Derived by automated computational analysis using gene prediction method: Gnomon.
coagulation factor XI; Derived by automated computational analysis using gene prediction method: Gnomon.
melatonin receptor 1A; Derived by automated computational analysis using gene prediction method: Gnomon.
FAT atypical cadherin 1; Derived by automated computational analysis using gene prediction method: Gnomon.
ZFP42 zinc finger protein; Derived by automated computational analysis using gene prediction method: Gnomon.
tripartite motif family like 2; Derived by automated computational analysis using gene prediction method: Gnomon.
probable E3 ubiquitin-protein ligase TRIML2
tripartite motif family like 1; Derived by automated computational analysis using gene prediction method: Gnomon.
probable E3 ubiquitin-protein ligase TRIML1
L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase-like; Derived by automated computational analysis using gene prediction method: Gnomon.
L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase-like
small nucleolar RNA SNORA81; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.6:RF01241
FSHD region gene 1; Derived by automated computational analysis using gene prediction method: Gnomon.
small nucleolar RNA U2-19; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.6:RF00494
small nucleolar RNA U2-30; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.6:RF00493
calcyclin-binding protein-like; Derived by automated computational analysis using gene prediction method: Gnomon.
N-acylsphingosine amidohydrolase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
N-acylsphingosine amidohydrolase 1, transcript variant X1
N-acylsphingosine amidohydrolase 1, transcript variant X2
pericentriolar material 1; Derived by automated computational analysis using gene prediction method: Gnomon.
fibrinogen like 1; Derived by automated computational analysis using gene prediction method: Gnomon.
microtubule associated scaffold protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
microtubule associated scaffold protein 1, transcript variant X1
microtubule associated scaffold protein 1, transcript variant X2
microtubule-associated tumor suppressor 1 isoform X1
microtubule-associated tumor suppressor 1 isoform X2
uncharacterized LOC128068412; Derived by automated computational analysis using gene prediction method: cmsearch.
U6atac minor spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.6:RF00619
platelet derived growth factor receptor like; Derived by automated computational analysis using gene prediction method: Gnomon.
platelet derived growth factor receptor like, transcript variant X2
platelet derived growth factor receptor like, transcript variant X1
platelet-derived growth factor receptor-like protein isoform X2
platelet-derived growth factor receptor-like protein isoform X1
solute carrier family 7 member 2; Derived by automated computational analysis using gene prediction method: Gnomon.
solute carrier family 7 member 2, transcript variant X2
solute carrier family 7 member 2, transcript variant X1
cationic amino acid transporter 2 isoform X2
cationic amino acid transporter 2 isoform X1
transfer RNA glutamic acid (anticodon UUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
myotubularin related protein 7; Derived by automated computational analysis using gene prediction method: Gnomon.
myotubularin related protein 7, transcript variant X2
myotubularin-related protein 7 isoform X2
myotubularin related protein 7, transcript variant X1
myotubularin-related protein 7 isoform X1
VPS37A subunit of ESCRT-I; Derived by automated computational analysis using gene prediction method: Gnomon.
vacuolar protein sorting-associated protein 37A
pleckstrin homology domain-containing family B member 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
CCR4-NOT transcription complex subunit 7; Derived by automated computational analysis using gene prediction method: Gnomon.
CCR4-NOT transcription complex subunit 7
zinc finger DHHC-type palmitoyltransferase 2; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger DHHC-type palmitoyltransferase 2, transcript variant X1
zinc finger DHHC-type palmitoyltransferase 2, transcript variant X2
zinc finger DHHC-type palmitoyltransferase 2, transcript variant X3
mitochondrial calcium uptake family member 3; Derived by automated computational analysis using gene prediction method: Gnomon.
mitochondrial calcium uptake family member 3
UBX domain-containing protein 2A-like; Derived by automated computational analysis using gene prediction method: Gnomon.
fibroblast growth factor 20; Derived by automated computational analysis using gene prediction method: Gnomon.
ubiquitin-conjugating enzyme E2 R2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
histone-lysine N-methyltransferase SETMAR-like; Derived by automated computational analysis using gene prediction method: Gnomon.
macrophage scavenger receptor 1; Derived by automated computational analysis using gene prediction method: Gnomon.
macrophage scavenger receptor 1, transcript variant X1
macrophage scavenger receptor types I and II isoform X1
macrophage scavenger receptor 1, transcript variant X2
macrophage scavenger receptor types I and II isoform X2
tumor suppressor candidate 3; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins
sarcoglycan zeta; Derived by automated computational analysis using gene prediction method: Gnomon.
DNA methyltransferase 1-associated protein 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
chromosome 24 C8orf48 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
DLC1 Rho GTPase activating protein; Derived by automated computational analysis using gene prediction method: Gnomon.
DLC1 Rho GTPase activating protein, transcript variant X1
rho GTPase-activating protein 7 isoform X1
2-iminobutanoate/2-iminopropanoate deaminase-like; Derived by automated computational analysis using gene prediction method: Gnomon.
2-iminobutanoate/2-iminopropanoate deaminase-like
DLC1 Rho GTPase activating protein, transcript variant X2
rho GTPase-activating protein 7 isoform X2
DLC1 Rho GTPase activating protein, transcript variant X3
rho GTPase-activating protein 7 isoform X3
tRNA methyltransferase 9B (putative); Derived by automated computational analysis using gene prediction method: Gnomon.
LON peptidase N-terminal domain and ring finger 1; Derived by automated computational analysis using gene prediction method: Gnomon.
LON peptidase N-terminal domain and ring finger 1
LON peptidase N-terminal domain and RING finger protein 1
PEAK1 related, kinase-activating pseudokinase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
PEAK1 related, kinase-activating pseudokinase 1
claudin 23; Derived by automated computational analysis using gene prediction method: Gnomon.
multifunctional ROCO family signaling regulator 1; Derived by automated computational analysis using gene prediction method: Gnomon.
multifunctional ROCO family signaling regulator 1, transcript variant X1
multifunctional ROCO family signaling regulator 1, transcript variant X2
malignant fibrous histiocytoma-amplified sequence 1 isoform X1
malignant fibrous histiocytoma-amplified sequence 1 isoform X2
transfer RNA glycine (anticodon UCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
small nucleolar RNA SNORA1; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.6:RF00408
uncharacterized LOC128068409; Derived by automated computational analysis using gene prediction method: Gnomon.
exoribonuclease 1; Derived by automated computational analysis using gene prediction method: Gnomon.
protein phosphatase 1 regulatory subunit 3B; Derived by automated computational analysis using gene prediction method: Gnomon.
protein phosphatase 1 regulatory subunit 3B, transcript variant X1
protein phosphatase 1 regulatory subunit 3B, transcript variant X2
protein phosphatase 1 regulatory subunit 3B isoform X1
protein phosphatase 1 regulatory subunit 3B isoform X2
tankyrase; Derived by automated computational analysis using gene prediction method: Gnomon.
poly [ADP-ribose] polymerase tankyrase-1
60S acidic ribosomal protein P1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
ubiquitin carboxyl-terminal hydrolase 11-like; Derived by automated computational analysis using gene prediction method: Gnomon.
ubiquitin carboxyl-terminal hydrolase 11-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 2 codons; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 11-like
dual specificity phosphatase 4; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
40S ribosomal protein S20; Derived by automated computational analysis using gene prediction method: Gnomon.
heterogeneous nuclear ribonucleoprotein C-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 48 Proteins
transfer RNA glutamine (anticodon CUG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
store-operated calcium entry associated regulatory factor; Derived by automated computational analysis using gene prediction method: Gnomon.
store-operated calcium entry associated regulatory factor
store-operated calcium entry-associated regulatory factor
leptin receptor overlapping transcript like 1; Derived by automated computational analysis using gene prediction method: Gnomon.
leptin receptor overlapping transcript like 1
leptin receptor overlapping transcript-like 1
membrane bound O-acyltransferase domain containing 4; Derived by automated computational analysis using gene prediction method: Gnomon.
membrane bound O-acyltransferase domain containing 4
dynactin subunit 6; Derived by automated computational analysis using gene prediction method: Gnomon.
40S ribosomal protein S6-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins
RNA binding protein, mRNA processing factor; Derived by automated computational analysis using gene prediction method: Gnomon.
RNA binding protein, mRNA processing factor, transcript variant X1
RNA binding protein, mRNA processing factor, transcript variant X2
RNA-binding protein with multiple splicing isoform X2
RNA-binding protein with multiple splicing isoform X1
general transcription factor IIE subunit 2; Derived by automated computational analysis using gene prediction method: Gnomon.
general transcription factor IIE subunit 2, transcript variant X1
transcription initiation factor IIE subunit beta isoform X1
general transcription factor IIE subunit 2, transcript variant X2
transcription initiation factor IIE subunit beta isoform X2
60S ribosomal protein L12-like; Derived by automated computational analysis using gene prediction method: Gnomon.
glutathione-disulfide reductase; Derived by automated computational analysis using gene prediction method: Gnomon.
UBX domain protein 8; Derived by automated computational analysis using gene prediction method: Gnomon.
UBX domain protein 8, transcript variant X1
UBX domain protein 8, transcript variant X2
UBX domain-containing protein 8 isoform X1
UBX domain-containing protein 8 isoform X2
protein phosphatase 2 catalytic subunit beta; Derived by automated computational analysis using gene prediction method: Gnomon.
protein phosphatase 2 catalytic subunit beta
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 Proteins
serine/threonine-protein phosphatase 2A catalytic subunit beta isoform
testis expressed 15, meiosis and synapsis associated; Derived by automated computational analysis using gene prediction method: Gnomon.
testis expressed 15, meiosis and synapsis associated
ATP synthase subunit d, mitochondrial-like; Derived by automated computational analysis using gene prediction method: Gnomon.
purine rich element binding protein G; Derived by automated computational analysis using gene prediction method: Gnomon.
purine-rich element-binding protein gamma
WRN RecQ like helicase; Derived by automated computational analysis using gene prediction method: Gnomon.
bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN
neuregulin 1; Derived by automated computational analysis using gene prediction method: Gnomon.
pro-neuregulin-1, membrane-bound isoform
calpain small subunit 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
fucosyltransferase 10; Derived by automated computational analysis using gene prediction method: Gnomon.
PC4 and SFRS1-interacting protein-like; Derived by automated computational analysis using gene prediction method: Gnomon.
MAK16 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
TELO2 interacting protein 2; Derived by automated computational analysis using gene prediction method: Gnomon.
TELO2 interacting protein 2, transcript variant X2
TELO2 interacting protein 2, transcript variant X1
small nucleolar RNA U13; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.6:RF01210
ring finger protein 122; Derived by automated computational analysis using gene prediction method: Gnomon.
ring finger protein 122, transcript variant X2
ring finger protein 122, transcript variant X1
dual specificity phosphatase 26; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128068262; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 5 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 5 bases in 3 codons; substituted 4 bases at 4 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: uncharacterized protein LOC128068262
small nucleolar RNA SNORA51; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.6:RF00432
unc-5 netrin receptor D; Derived by automated computational analysis using gene prediction method: Gnomon.
60S ribosomal protein L19-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins
uncharacterized LOC128068422; Derived by automated computational analysis using gene prediction method: cmsearch.
potassium calcium-activated channel subfamily U member 1; Derived by automated computational analysis using gene prediction method: Gnomon.
potassium calcium-activated channel subfamily U member 1
exocyst complex component 3-like; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger protein 703; Derived by automated computational analysis using gene prediction method: Gnomon.
elongation factor 1-beta-like; Derived by automated computational analysis using gene prediction method: Gnomon.
ER lipid raft associated 2; Derived by automated computational analysis using gene prediction method: Gnomon.
pyridoxal phosphate binding protein; Derived by automated computational analysis using gene prediction method: Gnomon.
pyridoxal phosphate binding protein, transcript variant X1
pyridoxal phosphate binding protein, transcript variant X2
pyridoxal phosphate homeostasis protein isoform X1
pyridoxal phosphate homeostasis protein isoform X2
adhesion G protein-coupled receptor A2; Derived by automated computational analysis using gene prediction method: Gnomon.
BRF2 RNA polymerase III transcription initiation factor subunit; Derived by automated computational analysis using gene prediction method: Gnomon.
BRF2 RNA polymerase III transcription initiation factor subunit
transcription factor IIIB 50 kDa subunit
RAB11 family interacting protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
glutamic-oxaloacetic transaminase 1 like 1; Derived by automated computational analysis using gene prediction method: Gnomon.
glutamic-oxaloacetic transaminase 1 like 1
putative aspartate aminotransferase, cytoplasmic 2
adrenoceptor beta 3; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins
eukaryotic translation initiation factor 4E binding protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
eukaryotic translation initiation factor 4E binding protein 1, transcript variant X1
eukaryotic translation initiation factor 4E binding protein 1, transcript variant X2
eukaryotic translation initiation factor 4E-binding protein 1 isoform X1
eukaryotic translation initiation factor 4E-binding protein 1 isoform X2
ASH2 like, histone lysine methyltransferase complex subunit; Derived by automated computational analysis using gene prediction method: Gnomon.
ASH2 like, histone lysine methyltransferase complex subunit
set1/Ash2 histone methyltransferase complex subunit ASH2
steroidogenic acute regulatory protein; Derived by automated computational analysis using gene prediction method: Gnomon.
steroidogenic acute regulatory protein, mitochondrial
LSM1 homolog, mRNA degradation associated; Derived by automated computational analysis using gene prediction method: Gnomon.
LSM1 homolog, mRNA degradation associated, transcript variant X1
U6 snRNA-associated Sm-like protein LSm1
LSM1 homolog, mRNA degradation associated, transcript variant X2
BAG cochaperone 4; Derived by automated computational analysis using gene prediction method: Gnomon.
BAG family molecular chaperone regulator 4
DDHD domain containing 2; Derived by automated computational analysis using gene prediction method: Gnomon.
phospholipid phosphatase 5; Derived by automated computational analysis using gene prediction method: Gnomon.
phospholipid phosphatase 5, transcript variant X1
phospholipid phosphatase 5, transcript variant X2
nuclear receptor binding SET domain protein 3; Derived by automated computational analysis using gene prediction method: Gnomon.
nuclear receptor binding SET domain protein 3
leucine zipper and EF-hand containing transmembrane protein 2; Derived by automated computational analysis using gene prediction method: Gnomon.
leucine zipper and EF-hand containing transmembrane protein 2
LETM1 domain-containing protein LETM2, mitochondrial
fibroblast growth factor receptor 1; Derived by automated computational analysis using gene prediction method: Gnomon.
fibroblast growth factor receptor 1, transcript variant X5
fibroblast growth factor receptor 1, transcript variant X4
fibroblast growth factor receptor 1, transcript variant X3
fibroblast growth factor receptor 1, transcript variant X1
fibroblast growth factor receptor 1, transcript variant X2
fibroblast growth factor receptor 1, transcript variant X6
fibroblast growth factor receptor 1 isoform X5
fibroblast growth factor receptor 1 isoform X4
fibroblast growth factor receptor 1 isoform X3
fibroblast growth factor receptor 1 isoform X2
fibroblast growth factor receptor 1 isoform X1
transforming acidic coiled-coil containing protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
transforming acidic coiled-coil containing protein 1, transcript variant X4
transforming acidic coiled-coil containing protein 1, transcript variant X1
transforming acidic coiled-coil containing protein 1, transcript variant X2
transforming acidic coiled-coil containing protein 1, transcript variant X3
transforming acidic coiled-coil-containing protein 1 isoform X1
transforming acidic coiled-coil-containing protein 1 isoform X2
transforming acidic coiled-coil-containing protein 1 isoform X3
transforming acidic coiled-coil-containing protein 1 isoform X4
pleckstrin homology domain containing A2; Derived by automated computational analysis using gene prediction method: Gnomon.
pleckstrin homology domain containing A2
pleckstrin homology domain-containing family A member 2
HtrA serine peptidase 4; Derived by automated computational analysis using gene prediction method: Gnomon.
TM2 domain containing 2; Derived by automated computational analysis using gene prediction method: Gnomon.
ADAM metallopeptidase domain 9; Derived by automated computational analysis using gene prediction method: Gnomon.
disintegrin and metalloproteinase domain-containing protein 9
disintegrin and metalloproteinase domain-containing protein 32-like; Derived by automated computational analysis using gene prediction method: Gnomon.
disintegrin and metalloproteinase domain-containing protein 32-like
disintegrin and metalloproteinase domain-containing protein 5-like; Derived by automated computational analysis using gene prediction method: Gnomon.
disintegrin and metalloproteinase domain-containing protein 5-like
vasculin-like protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
disintegrin and metalloproteinase domain-containing protein 2; Derived by automated computational analysis using gene prediction method: Gnomon.
disintegrin and metalloproteinase domain-containing protein 2
A disintegrin and metallopeptidase domain 3-like; Derived by automated computational analysis using gene prediction method: Gnomon.
A disintegrin and metallopeptidase domain 3-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: A disintegrin and metallopeptidase domain 3-like
disintegrin and metalloproteinase domain-containing protein 18-like; Derived by automated computational analysis using gene prediction method: Gnomon.
disintegrin and metalloproteinase domain-containing protein 18-like
indoleamine 2,3-dioxygenase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
indoleamine 2,3-dioxygenase 2; Derived by automated computational analysis using gene prediction method: Gnomon.
transcriptional and immune response regulator; Derived by automated computational analysis using gene prediction method: Gnomon.
transcriptional and immune response regulator
zinc finger matrin-type 4; Derived by automated computational analysis using gene prediction method: Gnomon.
small nucleolar RNA SNORA70; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.6:RF00156
secreted frizzled related protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
golgin A7; Derived by automated computational analysis using gene prediction method: Gnomon.
GINS complex subunit 4; Derived by automated computational analysis using gene prediction method: Gnomon.
DNA replication complex GINS protein SLD5
glycerol-3-phosphate acyltransferase 4; Derived by automated computational analysis using gene prediction method: Gnomon.
glycerol-3-phosphate acyltransferase 4, transcript variant X2
glycerol-3-phosphate acyltransferase 4, transcript variant X1
glycerol-3-phosphate acyltransferase 4 isoform X1
glycerol-3-phosphate acyltransferase 4 isoform X2
NK6 homeobox 3; Derived by automated computational analysis using gene prediction method: Gnomon.
ankyrin 1; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128068406; Derived by automated computational analysis using gene prediction method: Gnomon.
lysine acetyltransferase 6A; Derived by automated computational analysis using gene prediction method: Gnomon.
adaptor related protein complex 3 subunit mu 2; Derived by automated computational analysis using gene prediction method: Gnomon.
adaptor related protein complex 3 subunit mu 2
plasminogen activator, tissue type; Derived by automated computational analysis using gene prediction method: Gnomon.
inhibitor of nuclear factor kappa B kinase subunit beta; Derived by automated computational analysis using gene prediction method: Gnomon.
inhibitor of nuclear factor kappa B kinase subunit beta, transcript variant X2
inhibitor of nuclear factor kappa B kinase subunit beta, transcript variant X3
inhibitor of nuclear factor kappa B kinase subunit beta, transcript variant X4
inhibitor of nuclear factor kappa B kinase subunit beta, transcript variant X1
inhibitor of nuclear factor kappa B kinase subunit beta, transcript variant X5
inhibitor of nuclear factor kappa-B kinase subunit beta isoform X2
inhibitor of nuclear factor kappa-B kinase subunit beta isoform X4
inhibitor of nuclear factor kappa-B kinase subunit beta isoform X3
inhibitor of nuclear factor kappa-B kinase subunit beta isoform X1
inhibitor of nuclear factor kappa-B kinase subunit beta isoform X5
DNA polymerase beta; Derived by automated computational analysis using gene prediction method: Gnomon.
DNA polymerase beta, transcript variant X3
DNA polymerase beta, transcript variant X2
DNA polymerase beta, transcript variant X1
DNA polymerase beta, transcript variant X4
dickkopf-related protein 4-like; Derived by automated computational analysis using gene prediction method: Gnomon.
skin secretory protein xP2; Derived by automated computational analysis using gene prediction method: Gnomon.
voltage dependent anion channel 3; Derived by automated computational analysis using gene prediction method: Gnomon.
voltage-dependent anion-selective channel protein 3
solute carrier family 20 member 2; Derived by automated computational analysis using gene prediction method: Gnomon.
solute carrier family 20 member 2, transcript variant X2
solute carrier family 20 member 2, transcript variant X1
sodium-dependent phosphate transporter 2
small integral membrane protein 19; Derived by automated computational analysis using gene prediction method: Gnomon.
cholinergic receptor nicotinic beta 3 subunit; Derived by automated computational analysis using gene prediction method: Gnomon.
cholinergic receptor nicotinic beta 3 subunit
neuronal acetylcholine receptor subunit beta-3
cholinergic receptor nicotinic alpha 6 subunit; Derived by automated computational analysis using gene prediction method: Gnomon.
cholinergic receptor nicotinic alpha 6 subunit
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins
neuronal acetylcholine receptor subunit alpha-6
THAP domain containing 1; Derived by automated computational analysis using gene prediction method: Gnomon.
ring finger protein 170; Derived by automated computational analysis using gene prediction method: Gnomon.
hook microtubule tethering protein 3; Derived by automated computational analysis using gene prediction method: Gnomon.
farnesyltransferase, CAAX box, alpha; Derived by automated computational analysis using gene prediction method: Gnomon.
protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
protein O-mannose kinase; Derived by automated computational analysis using gene prediction method: Gnomon.
protein O-mannose kinase, transcript variant X6
protein O-mannose kinase, transcript variant X1
protein O-mannose kinase, transcript variant X5
protein O-mannose kinase, transcript variant X3
protein O-mannose kinase, transcript variant X7
protein O-mannose kinase, transcript variant X4
protein O-mannose kinase, transcript variant X2
protein O-mannose kinase, transcript variant X8
heparan-alpha-glucosaminide N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Gnomon.
heparan-alpha-glucosaminide N-acetyltransferase, transcript variant X1
heparan-alpha-glucosaminide N-acetyltransferase, transcript variant X2
heparan-alpha-glucosaminide N-acetyltransferase
integrator complex subunit 10; Derived by automated computational analysis using gene prediction method: Gnomon.
integrator complex subunit 10, transcript variant X3
integrator complex subunit 10, transcript variant X2
integrator complex subunit 10 isoform X3
integrator complex subunit 10 isoform X2
integrator complex subunit 10, transcript variant X1
integrator complex subunit 10 isoform X1
chondroitin sulfate N-acetylgalactosaminyltransferase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
chondroitin sulfate N-acetylgalactosaminyltransferase 1, transcript variant X3
chondroitin sulfate N-acetylgalactosaminyltransferase 1, transcript variant X4
chondroitin sulfate N-acetylgalactosaminyltransferase 1, transcript variant X5
chondroitin sulfate N-acetylgalactosaminyltransferase 1, transcript variant X1
chondroitin sulfate N-acetylgalactosaminyltransferase 1, transcript variant X6
chondroitin sulfate N-acetylgalactosaminyltransferase 1, transcript variant X2
chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1
chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X2
SH2 domain containing 4A; Derived by automated computational analysis using gene prediction method: Gnomon.
SH2 domain containing 4A, transcript variant X2
SH2 domain containing 4A, transcript variant X1
pleckstrin and Sec7 domain containing 3; Derived by automated computational analysis using gene prediction method: Gnomon.
arylamine N-acetyltransferase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
60S ribosomal protein L7-like; Derived by automated computational analysis using gene prediction method: Gnomon.
leucine rich repeat containing 3B; Derived by automated computational analysis using gene prediction method: Gnomon.
leucine rich repeat containing 3B, transcript variant X3
leucine rich repeat containing 3B, transcript variant X1
leucine rich repeat containing 3B, transcript variant X2
leucine-rich repeat-containing protein 3B
3-oxoacyl-ACP synthase, mitochondrial; Derived by automated computational analysis using gene prediction method: Gnomon.
3-oxoacyl-ACP synthase, mitochondrial, transcript variant X2
3-oxoacyl-ACP synthase, mitochondrial, transcript variant X1
3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial
N-glycanase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
peptide-N(4)-(N-acetyl-beta- glucosaminyl)asparagine amidase
DNA topoisomerase II beta; Derived by automated computational analysis using gene prediction method: Gnomon.
retinoic acid receptor beta; Derived by automated computational analysis using gene prediction method: Gnomon.
thyroid hormone receptor beta; Derived by automated computational analysis using gene prediction method: Gnomon.
thyroid hormone receptor beta, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50 Proteins
thyroid hormone receptor beta, transcript variant X4
thyroid hormone receptor beta, transcript variant X2
thyroid hormone receptor beta, transcript variant X3
thyroid hormone receptor beta, transcript variant X5
uracil-DNA glycosylase-like; Derived by automated computational analysis using gene prediction method: Gnomon.
nuclear receptor subfamily 1 group D member 2; Derived by automated computational analysis using gene prediction method: Gnomon.
nuclear receptor subfamily 1 group D member 2
ribosomal protein L15; Derived by automated computational analysis using gene prediction method: Gnomon.
NFKB inhibitor interacting Ras like 1; Derived by automated computational analysis using gene prediction method: Gnomon.
NFKB inhibitor interacting Ras like 1, transcript variant X1
NFKB inhibitor interacting Ras like 1, transcript variant X3
NFKB inhibitor interacting Ras like 1, transcript variant X2
NF-kappa-B inhibitor-interacting Ras-like protein 1
ubiquitin conjugating enzyme E2 E1; Derived by automated computational analysis using gene prediction method: Gnomon.
ubiquitin-conjugating enzyme E2 E2; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128068367; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128068184; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger protein 385D; Derived by automated computational analysis using gene prediction method: Gnomon.