Budorcas taxicolor mitochondrion, complete genome.
type: Entry
definition: Budorcas taxicolor mitochondrion, complete genome.
sequence version: NC_013069.1
sequence date: 2023-04-03
sequence: sequence
division: MAM
label: NC_013069.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA927338
keyword: RefSeq
source: mitochondrion Budorcas taxicolor (takin)
organism: Budorcas taxicolor
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Budorcas.
reference: 1
reference: 2
reference: 3
comment: PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to FJ006534.\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000819
sequence length: 16667
topology: circular
so has quality: SO_0000988
location: 1..16667
location: region:1-16667:1
RO_0002162: 37181

NC_013069
type: RefSeq
SIO_000068: refseq

PRJNA927338
type: BioProject
SIO_000068: bioproject

1
title: The complete mitochondrial genome and phylogenetic analysis of Takin(Budorcas taxicolor)
author: Wu, S.
author: Zeng, B.
author: Zhang, X.
author: Yue, B.
journal: Unpublished

2
title: Direct Submission
journal: Submitted (05-AUG-2009) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

3
title: Direct Submission
author: Wu, S.
author: Zeng, B.
author: Zhang, X.
author: Yue, B.
journal: Submitted (08-AUG-2008) College of Life Sciences, Sichuan University, Key Laboratory of Bio-resources and Eco-environment, Ministry of Education, Chengdu, Sichuan 610064, P.R.China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16667:1
position: 16667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16667:1:source
so part of: sequence
organism: Budorcas taxicolor
organelle: mitochondrion
mol type: genomic DNA

37181
type: Taxonomy
SIO_000068: taxonomy

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 37181
product: tRNA-Phe
so part of: sequence
location: 1..68
location: region:1-68:1
so has part: feature:1-68:1:region

position:68:1
position: 68
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-68:1:region

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 37181
product: s-rRNA
note: 12S ribosomal RNA
so part of: sequence
location: 69..1023
location: region:69-1023:1
so has part: feature:69-1023:1:region

position:69:1
position: 69
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1023:1
position: 1023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69-1023:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 37181
product: tRNA-Val
so part of: sequence
location: 1024..1090
location: region:1024-1090:1
so has part: feature:1024-1090:1:region

position:1024:1
position: 1024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1090:1
position: 1090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1024-1090:1:region

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 37181
product: l-rRNA
note: 16S ribosomal RNA
so part of: sequence
location: 1091..2664
location: region:1091-2664:1
so has part: feature:1091-2664:1:region

position:1091:1
position: 1091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2664:1
position: 2664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1091-2664:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 37181
product: tRNA-Leu
codon recognized: UUR
so part of: sequence
location: 2665..2739
location: region:2665-2739:1
so has part: feature:2665-2739:1:region

position:2665:1
position: 2665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2739:1
position: 2739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2665-2739:1:region

ND1
type: Gene
subclass of: SO_0000704
RO_0002162: 37181
gene: ND1
so part of: sequence
location: 2742..3697
location: region:2742-3697:1
so has part: feature:2742-3697:1:exon
subclass of: SO_0000010

8250974
type: Gene
SIO_000068: ncbigene

position:2742:1
position: 2742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3697:1
position: 3697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2742-3697:1:exon

ND1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37181
gene: ND1
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:3696..3697,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 1
translation: MFMLNILTLIIPILLAVAFLTLVERKILGYMQLRKGPNIVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALTLALTMWIPLPMPYPLINMNLGILFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGASHSPYMPELYAINFIIKSLLLTMTFLWIRASYPRFRYDQLMHLSWKNFLPLTLALCMWHVSLPILLSSIPPQT
SIO_010081: ND1
subclass of: SO_0000673
so part of: ND1
location: 2742..3697
location: region:2742-3697:1
so has part: feature:2742-3697:1:exon

YP_003097151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2742-3697:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 37181
product: tRNA-Ile
so part of: sequence
location: 3698..3766
location: region:3698-3766:1
so has part: feature:3698-3766:1:region

position:3698:1
position: 3698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3766:1
position: 3766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3698-3766:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 37181
product: tRNA-Gln
so part of: sequence
location: complement(3764..3835)
location: region:3764-3835:-1
so has part: feature:3764-3835:-1:region

position:3764:-1
position: 3764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3835:-1
position: 3835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3764-3835:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 37181
product: tRNA-Met
so part of: sequence
location: 3838..3906
location: region:3838-3906:1
so has part: feature:3838-3906:1:region

position:3838:1
position: 3838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3906:1
position: 3906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3838-3906:1:region

ND2
type: Gene
subclass of: SO_0000704
RO_0002162: 37181
gene: ND2
so part of: sequence
location: 3907..4948
location: region:3907-4948:1
so has part: feature:3907-4948:1:exon
subclass of: SO_0000010

8250973
type: Gene
SIO_000068: ncbigene

position:3907:1
position: 3907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4948:1
position: 4948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3907-4948:1:exon

ND2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37181
gene: ND2
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:4948,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 2
translation: MNPITLIIILMTIMLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPRATEASTKYFLTQSTASMLLMMAIIINLMFSGQWTVMKLFNPTASMLMTMALAMKLGMAPFHFWIPEVTQGIPLSSGLILLTWQKLAPMSVLYQVSQSINLNMILTLSILSIMIGGWGGLNQNQLRKIMAYSSIAHMGWMTAILPYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSLSHTWNKTPIMTILILITLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAITALLNLYFYMRLAYSTTLTMFPSTNNMKMKWQFSTMKRMTLLPTMTVLSTMLLPLTPILSILE
SIO_010081: ND2
subclass of: SO_0000673
so part of: ND2
location: 3907..4948
location: region:3907-4948:1
so has part: feature:3907-4948:1:exon

YP_003097152.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3907-4948:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 37181
product: tRNA-Trp
so part of: sequence
location: 4949..5015
location: region:4949-5015:1
so has part: feature:4949-5015:1:region

position:4949:1
position: 4949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5015:1
position: 5015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4949-5015:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 37181
product: tRNA-Ala
so part of: sequence
location: complement(5017..5085)
location: region:5017-5085:-1
so has part: feature:5017-5085:-1:region

position:5017:-1
position: 5017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5085:-1
position: 5085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5017-5085:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 37181
product: tRNA-Asn
so part of: sequence
location: complement(5087..5159)
location: region:5087-5159:-1
so has part: feature:5087-5159:-1:region

position:5087:-1
position: 5087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5159:-1
position: 5159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5087-5159:-1:region

rep_origin
type: Replication Origin
subclass of: SO_0000296
RO_0002162: 37181
so part of: sequence
location: complement(5160..5191)
location: region:5160-5191:-1
so has part: feature:5160-5191:-1:region

position:5160:-1
position: 5160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5191:-1
position: 5191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5160-5191:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 37181
product: tRNA-Cys
so part of: sequence
location: complement(5192..5259)
location: region:5192-5259:-1
so has part: feature:5192-5259:-1:region

position:5192:-1
position: 5192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5259:-1
position: 5259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5192-5259:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 37181
product: tRNA-Tyr
so part of: sequence
location: complement(5260..5327)
location: region:5260-5327:-1
so has part: feature:5260-5327:-1:region

position:5260:-1
position: 5260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5327:-1
position: 5327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5260-5327:-1:region

COX1
type: Gene
subclass of: SO_0000704
RO_0002162: 37181
alternative label: COI
gene: COX1
gene synonym: COI
so part of: sequence
location: 5329..6873
location: region:5329-6873:1
so has part: feature:5329-6873:1:exon
subclass of: SO_0000010

8250962
type: Gene
SIO_000068: ncbigene

position:5329:1
position: 5329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6873:1
position: 6873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5329-6873:1:exon

COX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37181
alternative label: COI
gene: COX1
gene synonym: COI
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit I
translation: MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNTTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMTFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYINLK
SIO_010081: COX1
subclass of: SO_0000673
so part of: COX1
location: 5329..6873
location: region:5329-6873:1
so has part: feature:5329-6873:1:exon

YP_003097153.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5329-6873:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 37181
product: tRNA-Ser
codon recognized: UCN
so part of: sequence
location: complement(6871..6939)
location: region:6871-6939:-1
so has part: feature:6871-6939:-1:region

position:6871:-1
position: 6871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6939:-1
position: 6939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6871-6939:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 37181
product: tRNA-Asp
so part of: sequence
location: 6947..7014
location: region:6947-7014:1
so has part: feature:6947-7014:1:region

position:6947:1
position: 6947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7014:1
position: 7014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6947-7014:1:region

COX2
type: Gene
subclass of: SO_0000704
RO_0002162: 37181
alternative label: COII
gene: COX2
gene synonym: COII
so part of: sequence
location: 7016..7699
location: region:7016-7699:1
so has part: feature:7016-7699:1:exon
subclass of: SO_0000010

8250963
type: Gene
SIO_000068: ncbigene

position:7016:1
position: 7016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7699:1
position: 7699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7016-7699:1:exon

COX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37181
alternative label: COII
gene: COX2
gene synonym: COII
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit II
translation: MAYPVQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIILLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRAVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLEYFEKWSASML
SIO_010081: COX2
subclass of: SO_0000673
so part of: COX2
location: 7016..7699
location: region:7016-7699:1
so has part: feature:7016-7699:1:exon

YP_003097154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7016-7699:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 37181
product: tRNA-Lys
so part of: sequence
location: 7702..7769
location: region:7702-7769:1
so has part: feature:7702-7769:1:region

position:7702:1
position: 7702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7769:1
position: 7769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7702-7769:1:region

ATP8
type: Gene
subclass of: SO_0000704
RO_0002162: 37181
gene: ATP8
so part of: sequence
location: 7771..7971
location: region:7771-7971:1
so has part: feature:7771-7971:1:exon
subclass of: SO_0000010

8250964
type: Gene
SIO_000068: ncbigene

position:7771:1
position: 7771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7971:1
position: 7971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7771-7971:1:exon

ATP8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37181
gene: ATP8
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 8
translation: MPQLDTSTWLTMILSMFLVLFIVLQLKISKHDFYYNPKLMTTKTPKQDAPWETKWTKIYLPLSLPL
SIO_010081: ATP8
subclass of: SO_0000673
so part of: ATP8
location: 7771..7971
location: region:7771-7971:1
so has part: feature:7771-7971:1:exon

YP_003097155.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7771-7971:1:exon

ATP6
type: Gene
subclass of: SO_0000704
RO_0002162: 37181
gene: ATP6
so part of: sequence
location: 7932..8612
location: region:7932-8612:1
so has part: feature:7932-8612:1:exon
subclass of: SO_0000010

8250965
type: Gene
SIO_000068: ncbigene

position:7932:1
position: 7932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8612:1
position: 8612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7932-8612:1:exon

ATP6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37181
gene: ATP6
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 6
translation: MNENLFTSFITPVILGLPLVTLVILFPSLLFPTSNRLINNRLISLQQWALQLMSKQMMSTHNTKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVVTGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALLNINTTTALITFTILALLTILEFAVAMIQAYVFTLLVSLYVHDNT
SIO_010081: ATP6
subclass of: SO_0000673
so part of: ATP6
location: 7932..8612
location: region:7932-8612:1
so has part: feature:7932-8612:1:exon

YP_003097156.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7932-8612:1:exon

COX3
type: Gene
subclass of: SO_0000704
RO_0002162: 37181
alternative label: COIII
gene: COX3
gene synonym: COIII
so part of: sequence
location: 8612..9395
location: region:8612-9395:1
so has part: feature:8612-9395:1:exon
subclass of: SO_0000010

8250966
type: Gene
SIO_000068: ncbigene

position:9395:1
position: 9395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8612-9395:1:exon

COX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37181
alternative label: COIII
gene: COX3
gene synonym: COIII
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:9395,aa:TERM)
transl table: 2
product: cytochrome c oxidase subunit III
translation: MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTALLTLGLTTNMLTMYQWWRDVIRESTFQGHHTPAVQKSLRYGMILFIVSEVLFFTGFFWAFYHSSLAPTPELGSCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITITLGVYFTLLQASEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS
SIO_010081: COX3
subclass of: SO_0000673
so part of: COX3
location: 8612..9395
location: region:8612-9395:1
so has part: feature:8612-9395:1:exon

YP_003097157.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8612-9395:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 37181
product: tRNA-Gly
so part of: sequence
location: 9396..9464
location: region:9396-9464:1
so has part: feature:9396-9464:1:region

position:9396:1
position: 9396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9464:1
position: 9464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9396-9464:1:region

ND3
type: Gene
subclass of: SO_0000704
RO_0002162: 37181
gene: ND3
so part of: sequence
location: 9465..9810
location: region:9465-9810:1
so has part: feature:9465-9810:1:exon
subclass of: SO_0000010

8250967
type: Gene
SIO_000068: ncbigene

position:9465:1
position: 9465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9810:1
position: 9810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9465-9810:1:exon

ND3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37181
gene: ND3
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:9810,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 3
translation: MNLMITLLTNFTLATLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMSLLLIFLLATSLAYEWTQKGLEWTE
SIO_010081: ND3
subclass of: SO_0000673
so part of: ND3
location: 9465..9810
location: region:9465-9810:1
so has part: feature:9465-9810:1:exon

YP_003097158.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9465-9810:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 37181
product: tRNA-Arg
so part of: sequence
location: 9812..9880
location: region:9812-9880:1
so has part: feature:9812-9880:1:region

position:9812:1
position: 9812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9880:1
position: 9880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9812-9880:1:region

ND4L
type: Gene
subclass of: SO_0000704
RO_0002162: 37181
gene: ND4L
so part of: sequence
location: 9881..10177
location: region:9881-10177:1
so has part: feature:9881-10177:1:exon
subclass of: SO_0000010

8250968
type: Gene
SIO_000068: ncbigene

position:9881:1
position: 9881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10177:1
position: 10177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9881-10177:1:exon

ND4L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37181
gene: ND4L
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 4L
translation: MSLVYMNIMMAFMVSLTGLLMYRSHLMSSLLCLEGMMLSLFVMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQC
SIO_010081: ND4L
subclass of: SO_0000673
so part of: ND4L
location: 9881..10177
location: region:9881-10177:1
so has part: feature:9881-10177:1:exon

YP_003097159.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9881-10177:1:exon

ND4
type: Gene
subclass of: SO_0000704
RO_0002162: 37181
gene: ND4
so part of: sequence
location: 10171..11548
location: region:10171-11548:1
so has part: feature:10171-11548:1:exon
subclass of: SO_0000010

8250969
type: Gene
SIO_000068: ncbigene

position:10171:1
position: 10171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11548:1
position: 11548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10171-11548:1:exon

ND4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37181
gene: ND4
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:11548,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 4
translation: MLKYIISTMMLMPLTWLSKNNMIWINSTLHSLLISLTSLLLMNQFGDNSLNFSLTFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENPARKKFFISMLILLQLFLIMTFSATELILFYIMFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNTMGSLNFLILQYWVQPMPSSWSNTFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLLLNPITDFMAYPFIMLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYTLYMLITTQRGKYTHHINNISPSFTRENALMSLHMLPLLLLSLNPKIILGPLY
SIO_010081: ND4
subclass of: SO_0000673
so part of: ND4
location: 10171..11548
location: region:10171-11548:1
so has part: feature:10171-11548:1:exon

YP_003097160.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10171-11548:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 37181
product: tRNA-His
so part of: sequence
location: 11549..11618
location: region:11549-11618:1
so has part: feature:11549-11618:1:region

position:11549:1
position: 11549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11618:1
position: 11618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11549-11618:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 37181
product: tRNA-Ser
codon recognized: AGY
so part of: sequence
location: 11619..11678
location: region:11619-11678:1
so has part: feature:11619-11678:1:region

position:11619:1
position: 11619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11678:1
position: 11678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11619-11678:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 37181
product: tRNA-Leu
codon recognized: CUN
so part of: sequence
location: 11680..11749
location: region:11680-11749:1
so has part: feature:11680-11749:1:region

position:11680:1
position: 11680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11749:1
position: 11749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11680-11749:1:region

ND5
type: Gene
subclass of: SO_0000704
RO_0002162: 37181
gene: ND5
so part of: sequence
location: 11750..13570
location: region:11750-13570:1
so has part: feature:11750-13570:1:exon
subclass of: SO_0000010

8250970
type: Gene
SIO_000068: ncbigene

position:11750:1
position: 11750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13570:1
position: 13570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11750-13570:1:exon

ND5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37181
gene: ND5
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 5
translation: MNLFPSLTLTTLILLTVPIMTTSLSTHKSTNYPLYVKTTISYAFITSMIPTMMFIHTGQEMIISNWHWLTIQTLKLSLSFKMDYFSTMFIPVSLFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNIFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLINLNTWDLQQIFLLKPENSNLPLMGLILAATGKSAQFSLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKLIQSTMLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPHLALLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLFKTMPFTATALIIGNLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLIATSFTAIYSTRIIFFTLLGQPRFPTLISINENNPFLINPIKRLLIGSLFAGFIISNNIPPTTIPQTTMPYYLKITALTITILGFILALEINNMTHYLKFNYPSNMFKFSNLLGYYPTVMHRLTPYMNLTMSQKSASSLLDLTWLEIIMPKTISLTQMKTSIMITNQKGLIKLYFLSFLITILISTILLNFHE
SIO_010081: ND5
subclass of: SO_0000673
so part of: ND5
location: 11750..13570
location: region:11750-13570:1
so has part: feature:11750-13570:1:exon

YP_003097161.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11750-13570:1:exon

ND6
type: Gene
subclass of: SO_0000704
RO_0002162: 37181
gene: ND6
so part of: sequence
location: complement(13554..14081)
location: region:13554-14081:-1
so has part: feature:13554-14081:-1:exon
subclass of: SO_0000010

8250971
type: Gene
SIO_000068: ncbigene

position:13554:-1
position: 13554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14081:-1
position: 14081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13554-14081:-1:exon

ND6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37181
gene: ND6
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 6
translation: MIMYIVFILSVIFVMGFVGFSSKPSPIYGGLGLIVSGGVGCGIVLNYGGSFLGLMVFLIYLGGMMVVFGYTTAMATEQYPEVWVSNKVVLGTFITGLLMEFFMIYYVLKDKEVEIVFKFNGMGDWVIYDTGDSGFFSEEAMGIAALYSYGTWLVIVTGWSLLIGVVVIMEITRGN
SIO_010081: ND6
subclass of: SO_0000673
so part of: ND6
location: complement(13554..14081)
location: region:13554-14081:-1
so has part: feature:13554-14081:-1:exon

YP_003097162.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13554-14081:-1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 37181
product: tRNA-Glu
so part of: sequence
location: complement(14082..14150)
location: region:14082-14150:-1
so has part: feature:14082-14150:-1:region

position:14082:-1
position: 14082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14150:-1
position: 14150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14082-14150:-1:region

CYTB
type: Gene
subclass of: SO_0000704
RO_0002162: 37181
gene: CYTB
so part of: sequence
location: 14155..15294
location: region:14155-15294:1
so has part: feature:14155-15294:1:exon
subclass of: SO_0000010

8250972
type: Gene
SIO_000068: ncbigene

position:14155:1
position: 14155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15294:1
position: 15294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14155-15294:1:exon

CYTB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37181
gene: CYTB
codon start: 1
transl table: 2
product: cytochrome b
translation: MINIRKTHPLMKIVNNALIDLPTPSNISSWWNFGSLLGTCLALQILTGLFLAMHYTSDTTMAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIVALTMIHLIFLHETGSNNPTGIPSDTDKIPFHPYYTIKDILGIMLLILILMSLVLFTPDLLGDPDNYTPANPLNTPSHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILTLVPFLHTSKQRSMMFRPISQCMFWLLMADLLTLTWIGGQPVEHPYIIIGQLASIMYFLIILAMMPLASTIENNLLKW
SIO_010081: CYTB
subclass of: SO_0000673
so part of: CYTB
location: 14155..15294
location: region:14155-15294:1
so has part: feature:14155-15294:1:exon

YP_003097163.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14155-15294:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 37181
product: tRNA-Thr
so part of: sequence
location: 15298..15367
location: region:15298-15367:1
so has part: feature:15298-15367:1:region

position:15298:1
position: 15298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15367:1
position: 15367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15298-15367:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 37181
product: tRNA-Pro
so part of: sequence
location: complement(15367..15432)
location: region:15367-15432:-1
so has part: feature:15367-15432:-1:region

position:15367:-1
position: 15367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15432:-1
position: 15432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15367-15432:-1:region

D-loop
type: Displacement Loop
subclass of: SO_0000297
RO_0002162: 37181
note: control region
so part of: sequence
location: 15433..16667
location: region:15433-16667:1
so has part: feature:15433-16667:1:region

position:15433:1
position: 15433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15433-16667:1:region