Mycolicibacterium pallens strain JCM 16370 plasmid unnamed1, complete sequence.
type: Entry
definition: Mycolicibacterium pallens strain JCM 16370 plasmid unnamed1, complete sequence.
sequence version: NZ_CP080334.1
sequence date: 2023-06-25
sequence: sequence
division: CON
label: NZ_CP080334.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN20254255
keyword: RefSeq
source: Mycolicibacterium pallens (Mycobacterium pallens)
organism: Mycolicibacterium pallens
taxonomy: Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales; Mycobacteriaceae; Mycolicibacterium.
reference: 1
references: 36651784
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP080334.1.\nBacteria and source DNA available from Japan Collection of\nMicroorganisms (JCM).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Flye v. 2.8.3\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 99.0x; 60.4\nSequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 06/25/2023 10:37:53\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,982\nCDSs (total) :: 5,926\nGenes (coding) :: 5,795\nCDSs (with protein) :: 5,795\nGenes (RNA) :: 56\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 47\nncRNAs :: 3\nPseudo Genes (total) :: 131\nCDSs (without protein) :: 131\nPseudo Genes (ambiguous residues) :: 0 of 131\nPseudo Genes (frameshifted) :: 63 of 131\nPseudo Genes (incomplete) :: 66 of 131\nPseudo Genes (internal stop) :: 17 of 131\nPseudo Genes (multiple problems) :: 13 of 131\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 29753
topology: circular
so has quality: SO_0000988
location: 1..29753
location: region:1-29753:1
RO_0002162: 370524

NZ_CP080334
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN20254255
type: BioSample
SIO_000068: biosample

1
title: Complete Genome Sequences of 14 Nontuberculous Mycobacteria Type Strains
author: Igarashi, Y.
author: Osugi, A.
author: Murase, Y.
author: Chikamatsu, K.
author: Shimomura, Y.
author: Hosoya, M.
author: Aono, A.
author: Morishige, Y.
author: Yamada, H.
author: Takaki, A.
author: Mitarai, S.
journal: Microbiol Resour Announc 12 (2), e0121422 (2023)
pubmed: 36651784

36651784
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Igarashi, Y.
author: Osugi, A.
author: Mitarai, S.
journal: Submitted (27-JUL-2021) Department of Mycobacterium reference and research, Research Institute of Tuberculosis, 3-1-24 matsuyama, kiyose, tokyo 204-8533, Japan

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29753:1
position: 29753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-29753:1:source
so part of: sequence
organism: Mycolicibacterium pallens
mol type: genomic DNA
strain: JCM 16370
type material: type strain of Mycobacterium pallens
plasmid: unnamed1

370524
type: Taxonomy
SIO_000068: taxonomy

K0O64_RS29475
type: Gene
subclass of: SO_0000704
RO_0002162: 370524
locus tag: K0O64_RS29475
old locus tag: K0O64_29475
pseudo: true
so part of: sequence
location: join(29047..29753,1..38)
location: region:1-29753:1
so has part: feature:29047-29753:1:exon
so has part: feature:1-38:1:exon
subclass of: SO_0000010

urn:…
SIO_000300: 1
SIO_000628: feature:29047-29753:1:exon

position:29047:1
position: 29047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-38:1:exon

position:38:1
position: 38
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

K0O64_RS29475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 370524
locus tag: K0O64_RS29475
old locus tag: K0O64_29475
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020494960.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: SDR family NAD(P)-dependent oxidoreductase
SIO_010081: K0O64_RS29475
subclass of: SO_0000673
so part of: K0O64_RS29475
location: join(29047..29753,1..38)
location: region:1-29753:1
so has part: feature:29047-29753:1:exon
so has part: feature:1-38:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29047-29753:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-38:1:exon

K0O64_RS29480
type: Gene
subclass of: SO_0000704
RO_0002162: 370524
locus tag: K0O64_RS29480
old locus tag: K0O64_29480
so part of: sequence
location: 31..1494
location: region:31-1494:1
so has part: feature:31-1494:1:exon
subclass of: SO_0000010

position:31:1
position: 31
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1494:1
position: 1494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31-1494:1:exon

K0O64_RS29480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 370524
locus tag: K0O64_RS29480
old locus tag: K0O64_29480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020668034.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MTEGRQPARRWWILAVICVAQLLDVIDLTIVNIALPHAQSDLGFSAGDRQWIVTAYALAFGALLLPFGRLSDLIGRRGMLMTGLIIFAGASALGGSAPSFAVLVAARGAQGVAAAMIAPAALALLSTTFTEPKERSTAFAVFGGISGSGAALGMLLGGMLTNYLSWRSTLFVNVAIGLVALLGAATLITRPPKVLDRPNLDVPGTLIASAGLCVIVYGFAGAESHPWSAPNTWAVLAGGVLLIAIFMWWQTRARHPLLPPEVIRDRTRGGANLAIFIGSIGLFGTFLFLNYYLQETLHYSPIATGLAFLPMVVAVAVTGGVCTTQLYPRFGARPPIVIGMLSAAAAMLWLTRIGTQSTYTAGILGPLMALGMGIGAIMAPAMIAGTTCVEPRDAGIASATVNVAQQLGGAIGLAFLNSIAAATLTRYAAGHDGTSPAVHTEAAIHSYTIAFWSSGTILATGAIACGLVMRSGSPPHMQIPTTMIHRS
SIO_010081: K0O64_RS29480
subclass of: SO_0000673
so part of: K0O64_RS29480
location: 31..1494
location: region:31-1494:1
so has part: feature:31-1494:1:exon

WP_220046560.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31-1494:1:exon

K0O64_RS29485
type: Gene
subclass of: SO_0000704
RO_0002162: 370524
locus tag: K0O64_RS29485
old locus tag: K0O64_29485
so part of: sequence
location: complement(2185..2838)
location: region:2185-2838:-1
so has part: feature:2185-2838:-1:exon
subclass of: SO_0000010

position:2185:-1
position: 2185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2838:-1
position: 2838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2185-2838:-1:exon

K0O64_RS29485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 370524
locus tag: K0O64_RS29485
old locus tag: K0O64_29485
inference: COORDINATES: protein motif:HMM:NF015799.2
GO function: GO:0003723 - RNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ANTAR domain-containing protein
translation: MSSPGQDVTVGWFQLDGATGIWRCTPASAHPERAEAAPPLTGTTAALRALLHPADAALPLLFVGRIRATSEPLRTRFRLLDADGVVHHITAAATVRHDPTGQLIDAVGVYLDRMSAAHPTPALSDVIRDRATIEQAKGMLMLIYRLDADQAFAVLRELSQHGNIKLRILARQIVTDFRALPHPDAALADPHAYTELLRTTHLRAAPPITDESSRPPG
SIO_010081: K0O64_RS29485
subclass of: SO_0000673
so part of: K0O64_RS29485
location: complement(2185..2838)
location: region:2185-2838:-1
so has part: feature:2185-2838:-1:exon

WP_220046561.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2185-2838:-1:exon

K0O64_RS29490
type: Gene
subclass of: SO_0000704
RO_0002162: 370524
locus tag: K0O64_RS29490
old locus tag: K0O64_29490
so part of: sequence
location: complement(2933..3373)
location: region:2933-3373:-1
so has part: feature:2933-3373:-1:exon
subclass of: SO_0000010

position:2933:-1
position: 2933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3373:-1
position: 3373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2933-3373:-1:exon

K0O64_RS29490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 370524
locus tag: K0O64_RS29490
old locus tag: K0O64_29490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006940989.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HSP20 family small heat-shock protein
translation: MEVTPMVMMFDPFRDLGRFTEQVLGTAARPSGLPVDAWRDGDGFVVEFDVPGIAPDALDVQVDHDVLTVTAERPEVSDQNGQWVIAERPHGVFRRQLSLGQHLDTEHIEADYHSGVLRVRIPVAETAKPRKIAIGSPAPQHALDQG
SIO_010081: K0O64_RS29490
subclass of: SO_0000673
so part of: K0O64_RS29490
location: complement(2933..3373)
location: region:2933-3373:-1
so has part: feature:2933-3373:-1:exon

WP_275085031.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2933-3373:-1:exon

K0O64_RS29495
type: Gene
subclass of: SO_0000704
RO_0002162: 370524
locus tag: K0O64_RS29495
old locus tag: K0O64_29495
so part of: sequence
location: 3745..4053
location: region:3745-4053:1
so has part: feature:3745-4053:1:exon
subclass of: SO_0000010

position:3745:1
position: 3745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4053:1
position: 4053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3745-4053:1:exon

K0O64_RS29495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 370524
locus tag: K0O64_RS29495
old locus tag: K0O64_29495
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007172441.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ANTAR domain-containing protein
translation: MSTAGYDHPDPRRSADRMLDTAEGVLVALRRYRLNDAFRDLMTTARRHNVNPLTLADALVALAENHGVNALDTDVVAIARHTWGPLLDQPRNHQTPHDDDHP
SIO_010081: K0O64_RS29495
subclass of: SO_0000673
so part of: K0O64_RS29495
location: 3745..4053
location: region:3745-4053:1
so has part: feature:3745-4053:1:exon

WP_220046563.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3745-4053:1:exon

K0O64_RS29500
type: Gene
subclass of: SO_0000704
RO_0002162: 370524
locus tag: K0O64_RS29500
old locus tag: K0O64_29500
so part of: sequence
location: complement(4479..4895)
location: region:4479-4895:-1
so has part: feature:4479-4895:-1:exon
subclass of: SO_0000010

position:4479:-1
position: 4479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4895:-1
position: 4895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4479-4895:-1:exon

K0O64_RS29500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 370524
locus tag: K0O64_RS29500
old locus tag: K0O64_29500
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYTALLITPAGDVQEISVFAQSAINAFLRAPCVDCLTSSDGVIDFWFRSAVPGRYRPNQQATGLLLSVTTFSVRTVPLLYGSVIVSSKSSEGRLLGLTTQDRRRLRDPGRLGRMWLHRRFQHARDWTPRSRHQHHIEH
SIO_010081: K0O64_RS29500
subclass of: SO_0000673
so part of: K0O64_RS29500
location: complement(4479..4895)
location: region:4479-4895:-1
so has part: feature:4479-4895:-1:exon

WP_220046564.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4479-4895:-1:exon

K0O64_RS29505
type: Gene
subclass of: SO_0000704
RO_0002162: 370524
locus tag: K0O64_RS29505
old locus tag: K0O64_29505
so part of: sequence
location: complement(4935..5135)
location: region:4935-5135:-1
so has part: feature:4935-5135:-1:exon
subclass of: SO_0000010

position:4935:-1
position: 4935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5135:-1
position: 5135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4935-5135:-1:exon

K0O64_RS29505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 370524
locus tag: K0O64_RS29505
old locus tag: K0O64_29505
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIRWTSIDTHCSGCLRPAPVDEADPENAQWMVKSIIKDRDFLDGPYLVVCPACHQQALPDLRHIGS
SIO_010081: K0O64_RS29505
subclass of: SO_0000673
so part of: K0O64_RS29505
location: complement(4935..5135)
location: region:4935-5135:-1
so has part: feature:4935-5135:-1:exon

WP_220046565.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4935-5135:-1:exon

K0O64_RS29510
type: Gene
subclass of: SO_0000704
RO_0002162: 370524
locus tag: K0O64_RS29510
old locus tag: K0O64_29510
so part of: sequence
location: complement(5665..6030)
location: region:5665-6030:-1
so has part: feature:5665-6030:-1:exon
subclass of: SO_0000010

position:5665:-1
position: 5665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6030:-1
position: 6030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5665-6030:-1:exon

K0O64_RS29510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 370524
locus tag: K0O64_RS29510
old locus tag: K0O64_29510
inference: COORDINATES: protein motif:HMM:NF015799.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ANTAR domain-containing protein
translation: MTSVRSIAALPMHHDRFVLGVLILAAERPDAFDATVLANAADLAALAAGAWSAVVREEQLRRALNSRDDIGQAKGILMERFSITADGAFALLRQLSQESNTPLLDIAQHLIVTVTNGDVST
SIO_010081: K0O64_RS29510
subclass of: SO_0000673
so part of: K0O64_RS29510
location: complement(5665..6030)
location: region:5665-6030:-1
so has part: feature:5665-6030:-1:exon

WP_079889810.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5665-6030:-1:exon

K0O64_RS29515
type: Gene
subclass of: SO_0000704
RO_0002162: 370524
locus tag: K0O64_RS29515
old locus tag: K0O64_29515
so part of: sequence
location: 6336..6518
location: region:6336-6518:1
so has part: feature:6336-6518:1:exon
subclass of: SO_0000010

position:6336:1
position: 6336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6518:1
position: 6518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6336-6518:1:exon

K0O64_RS29515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 370524
locus tag: K0O64_RS29515
old locus tag: K0O64_29515
EC number: 2.7.7.65
inference: COORDINATES: protein motif:HMM:NF013180.2
GO function: GO:0009975 - cyclase activity [Evidence IEA]
GO process: GO:0009966 - regulation of signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: diguanylate cyclase
translation: MLAVVPIERRRLADLINRRLRLSDVFARIGGDEFAVLLPHTPAAQAQKLAQELVDLVNDH
SIO_010081: K0O64_RS29515
subclass of: SO_0000673
so part of: K0O64_RS29515
location: 6336..6518
location: region:6336-6518:1
so has part: feature:6336-6518:1:exon

WP_225933807.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6336-6518:1:exon

K0O64_RS29520
type: Gene
subclass of: SO_0000704
RO_0002162: 370524
gene: mobF
locus tag: K0O64_RS29520
old locus tag: K0O64_29520
so part of: sequence
location: complement(6638..9565)
location: region:6638-9565:-1
so has part: feature:6638-9565:-1:exon
subclass of: SO_0000010

position:6638:-1
position: 6638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9565:-1
position: 9565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6638-9565:-1:exon

K0O64_RS29520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 370524
gene: mobF
locus tag: K0O64_RS29520
old locus tag: K0O64_29520
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017555467.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobF family relaxase
translation: MLTVAKLSRWSVDYYNSTARAVGDAVKDRQRANGGLAEYYAERDTRTPVWTCAGDARVAAELVGLSDSERGGGDADPDVVARWLDEGVAPSGECGRAHGKHGVHGFDLTFCAPKSVSLVRAFGDDVIDKAVSAAHQMAIAEALEYLAVHAGYTRVHNPVTGEKDLQKLPGLVAAAYQHETSRAGDPHLHTHVLVPNRQARADGRLVSIDGTSLFHEARAAGIIYQATLRYELHRLTGIEWGPVDPSTGMAEIAGIDPKNIAVWSQRSTQLRQWAASNLTLVEGGAGLSQAQLAAAQKATRPRKPESLSWAELRTQWRADGRGLVLSRAAQREARAAREHTARTAAARVARAGVAVDRRVVAAMAARGDKAALTRADLVEIIGAQLPLLVDDAAGPVSGGGAGAGMPRQLIETCVDAVGMRLTAPRAAHQREGSERFTVDAILAEERRVFDLVDATNVRAMAWVRPEHTAAALWLSEQQHQVVTAIASTSQLVVPLSAPAGAGKTTSMRALRTIVERRQKARVIVIAPTGKAVDVAVAEGVASEGYTMHSALGRLADGRLELGPFDVVVVDEAGMVGTDHWRQLLSATTTAGTKTVMVGDAHQLEPVQARGGMFAQLCDELPWAQRLSEVWRQHDPAERAASLALRDGGPAPVRRAVAWYRDHDRLACGDQITMAADALTAHHADLTAGKDALLLADTVEMTDALNRRVHDQTVTDRTAEGRDTTTVTAGRGHHITTGDVVISRRNDPTITVYQADDRTQTLTDAPVRNGQRWRVVNVDDNREHPRIAARRLSDGAWAVFSDDYLHDHVQLGHAVTVHAAQGATADTTHAVLADTASRNLAYVALTRGRESNHAYLYQRDSTDTDHSHDLAAGAEEVEGIHLARRGTPAQAARALRQVIGRDEPARTAHQIAADTPTHLLPEVVASLVAEHHQAVTQRRSTYQKNQRIQQDRALSRHLGLDRSQHREQESGYDLSL
SIO_010081: K0O64_RS29520
subclass of: SO_0000673
so part of: K0O64_RS29520
location: complement(6638..9565)
location: region:6638-9565:-1
so has part: feature:6638-9565:-1:exon

WP_220046566.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6638-9565:-1:exon

K0O64_RS29525
type: Gene
subclass of: SO_0000704
RO_0002162: 370524
locus tag: K0O64_RS29525
old locus tag: K0O64_29525
so part of: sequence
location: 9799..9957
location: region:9799-9957:1
so has part: feature:9799-9957:1:exon
subclass of: SO_0000010

position:9799:1
position: 9799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9957:1
position: 9957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9799-9957:1:exon

K0O64_RS29525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 370524
locus tag: K0O64_RS29525
old locus tag: K0O64_29525
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEMLRVLEMRGDTAGLAALMSYLVDGVSTAVQQPVRPWDIATIASETPPHAV
SIO_010081: K0O64_RS29525
subclass of: SO_0000673
so part of: K0O64_RS29525
location: 9799..9957
location: region:9799-9957:1
so has part: feature:9799-9957:1:exon

WP_220046567.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9799-9957:1:exon

K0O64_RS30025
type: Gene
subclass of: SO_0000704
RO_0002162: 370524
locus tag: K0O64_RS30025
so part of: sequence
location: complement(10040..10540)
location: region:10040-10540:-1
so has part: feature:10040-10540:-1:exon
subclass of: SO_0000010

position:10040:-1
position: 10040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10540:-1
position: 10540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10040-10540:-1:exon

K0O64_RS30025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 370524
locus tag: K0O64_RS30025
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVAATHGLHHAHIGVICDALTAAGIDPTVWTARAITDALNTDMRTHGATWPDHITHPGAFLFSRLHRLDWSPVQHPSKAGGYAAGSLDQEARPASPTAAQRARIAAAQQEIRRVLARPPAPPAIERPERTPRALARAAHLPPVSAPNNERRGSLFDARREAAQGEW
SIO_010081: K0O64_RS30025
subclass of: SO_0000673
so part of: K0O64_RS30025
location: complement(10040..10540)
location: region:10040-10540:-1
so has part: feature:10040-10540:-1:exon

WP_225933808.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10040-10540:-1:exon

K0O64_RS29535
type: Gene
subclass of: SO_0000704
RO_0002162: 370524
locus tag: K0O64_RS29535
old locus tag: K0O64_29535
so part of: sequence
location: complement(11518..11715)
location: region:11518-11715:-1
so has part: feature:11518-11715:-1:exon
subclass of: SO_0000010

position:11518:-1
position: 11518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11715:-1
position: 11715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11518-11715:-1:exon

K0O64_RS29535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 370524
locus tag: K0O64_RS29535
old locus tag: K0O64_29535
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008264012.1
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribbon-helix-helix protein, CopG family
translation: MAQPHKGPREQIKVRADASVYARLREMAAERGTSVSQLSADLLAIAVGRPEAVRELDKEVLPLAM
SIO_010081: K0O64_RS29535
subclass of: SO_0000673
so part of: K0O64_RS29535
location: complement(11518..11715)
location: region:11518-11715:-1
so has part: feature:11518-11715:-1:exon

WP_036405108.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11518-11715:-1:exon

K0O64_RS29540
type: Gene
subclass of: SO_0000704
RO_0002162: 370524
locus tag: K0O64_RS29540
old locus tag: K0O64_29540
so part of: sequence
location: 12033..12572
location: region:12033-12572:1
so has part: feature:12033-12572:1:exon
subclass of: SO_0000010

position:12033:1
position: 12033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12572:1
position: 12572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12033-12572:1:exon

K0O64_RS29540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 370524
locus tag: K0O64_RS29540
old locus tag: K0O64_29540
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005149445.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPAVELFVDESCRSDYLLCAAVVPVADIASARRMMRELKPKNRDRLHMKDESRHRDQILARFVSAPPIEQAHIFVGSLRGTRRTQRQVRTQCLTALGTYAADNGVTRILLESCSQDKQDRAAVVGALAAKAATDRVRVMIDRPTSHELLWAADLVAWAYGAGGAARSAISPLVTVHNLH
SIO_010081: K0O64_RS29540
subclass of: SO_0000673
so part of: K0O64_RS29540
location: 12033..12572
location: region:12033-12572:1
so has part: feature:12033-12572:1:exon

WP_225933809.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12033-12572:1:exon

K0O64_RS29545
type: Gene
subclass of: SO_0000704
RO_0002162: 370524
locus tag: K0O64_RS29545
old locus tag: K0O64_29545
so part of: sequence
location: complement(12751..13107)
location: region:12751-13107:-1
so has part: feature:12751-13107:-1:exon
subclass of: SO_0000010

position:12751:-1
position: 12751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13107:-1
position: 13107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12751-13107:-1:exon

K0O64_RS29545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 370524
locus tag: K0O64_RS29545
old locus tag: K0O64_29545
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005149424.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAITAADRIKANAERLRKAPMQQTVTPERPEQVPQETPPQSTPRSAPAPVVRQKTVRRTVDLSPTAHRGLDNWQRDTADRLGLARVTGQEVITALIDRLLADSDLAEQIVQVIAAQRP
SIO_010081: K0O64_RS29545
subclass of: SO_0000673
so part of: K0O64_RS29545
location: complement(12751..13107)
location: region:12751-13107:-1
so has part: feature:12751-13107:-1:exon

WP_220046568.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12751-13107:-1:exon

K0O64_RS29550
type: Gene
subclass of: SO_0000704
RO_0002162: 370524
locus tag: K0O64_RS29550
old locus tag: K0O64_29550
so part of: sequence
location: complement(13158..13787)
location: region:13158-13787:-1
so has part: feature:13158-13787:-1:exon
subclass of: SO_0000010

position:13158:-1
position: 13158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13787:-1
position: 13787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13158-13787:-1:exon

K0O64_RS29550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 370524
locus tag: K0O64_RS29550
old locus tag: K0O64_29550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005149425.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MPALTIVVANLKGGSTKTTTAAFVLHALAEAGLPALGVDADGENESLLAWSEAGEWSIPVIGMPVADLHRKLPGVVGDRYDGVVIDTPPMKERRGVVASAIRIATHVLVPMAPTGMEYARIPAIRELVEEAGALAVTPPQLAVVLTRTVSNAASTDVYRQMLSDDGVRVLRPTVGRLERYAQAFGLPITNAAGTAYGDVADELTSIGIT
SIO_010081: K0O64_RS29550
subclass of: SO_0000673
so part of: K0O64_RS29550
location: complement(13158..13787)
location: region:13158-13787:-1
so has part: feature:13158-13787:-1:exon

WP_220046569.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13158-13787:-1:exon

K0O64_RS29555
type: Gene
subclass of: SO_0000704
RO_0002162: 370524
locus tag: K0O64_RS29555
old locus tag: K0O64_29555
pseudo: true
so part of: sequence
location: 14200..14932
location: region:14200-14932:1
so has part: feature:14200-14932:1:exon
subclass of: SO_0000010

position:14200:1
position: 14200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14932:1
position: 14932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14200-14932:1:exon

K0O64_RS29555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 370524
locus tag: K0O64_RS29555
old locus tag: K0O64_29555
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005088169.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: NYN domain-containing protein
SIO_010081: K0O64_RS29555
subclass of: SO_0000673
so part of: K0O64_RS29555
location: 14200..14932
location: region:14200-14932:1
so has part: feature:14200-14932:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14200-14932:1:exon

K0O64_RS29560
type: Gene
subclass of: SO_0000704
RO_0002162: 370524
locus tag: K0O64_RS29560
old locus tag: K0O64_29560
pseudo: true
so part of: sequence
location: 15316..>15624
location: region:15316-15624:1
so has part: feature:15316-15624:1:exon
subclass of: SO_0000010

position:15316:1
position: 15316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15624:1
position: 15624
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15316-15624:1:exon

K0O64_RS29560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 370524
locus tag: K0O64_RS29560
old locus tag: K0O64_29560
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019749855.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: recombinase family protein
SIO_010081: K0O64_RS29560
subclass of: SO_0000673
so part of: K0O64_RS29560
location: 15316..>15624
location: region:15316-15624:1
so has part: feature:15316-15624:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15316-15624:1:exon

K0O64_RS29565
type: Gene
subclass of: SO_0000704
RO_0002162: 370524
locus tag: K0O64_RS29565
old locus tag: K0O64_29565
so part of: sequence
location: complement(15678..16490)
location: region:15678-16490:-1
so has part: feature:15678-16490:-1:exon
subclass of: SO_0000010

position:15678:-1
position: 15678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16490:-1
position: 16490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15678-16490:-1:exon

K0O64_RS29565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 370524
locus tag: K0O64_RS29565
old locus tag: K0O64_29565
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014711299.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MSTQRPDTSPAVKPIEVSAELKALMRRLKLGQLLDTLPERLALARTNRLPHHDFLELLFADEVTRRDRESAARRAKAAHLDPAMQLQAWDDSAAVAFDQQLWAELTSLRFLADAYNVLVMGPVGVGKTFLANALGHIAVRKHHSVHTERADKLFKRLRGARLDGSYEDEMRKLHRVDLLIIDDLALHRLEATETTDFYEIIVERHRAASTVITSNREPPEILTMMADPLLAQSAMDRLQSAAYELVVEGESYRQRQKPGTPKPAPPTSSD
SIO_010081: K0O64_RS29565
subclass of: SO_0000673
so part of: K0O64_RS29565
location: complement(15678..16490)
location: region:15678-16490:-1
so has part: feature:15678-16490:-1:exon

WP_071944021.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15678-16490:-1:exon

K0O64_RS30030
type: Gene
subclass of: SO_0000704
RO_0002162: 370524
locus tag: K0O64_RS30030
so part of: sequence
location: complement(16487..17431)
location: region:16487-17431:-1
so has part: feature:16487-17431:-1:exon
subclass of: SO_0000010

position:16487:-1
position: 16487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17431:-1
position: 17431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16487-17431:-1:exon

K0O64_RS30030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 370524
locus tag: K0O64_RS30030
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGVLRRSVRGGDPRQHESHRHHRAHATEPRLNDSFREYAQARGFAVDPARVRSPKDKPRVERMVSYVRSNFYAGEAFRDLDDCRNRAELWCSDIAGLRIHGTTRLRPAEVFAADELPALKPVPETVFDVPVWTHPKVAPDRHVQVAKALYSVPGELVGKRIEARADAHTVKLYWRGELIKVHPVTAPGRRHTDPADLPSEVSVYAMRDLDALQRKAAAQGTHVGVYAAAVLEHPLPWTKMRQVYRLLGLVRRHGPDAVDDACRRALDAEVIDVGLIERILTRGGGEQLPLIPTPPGAASRFVRDGSDFAVRRPS
SIO_010081: K0O64_RS30030
subclass of: SO_0000673
so part of: K0O64_RS30030
location: complement(16487..17431)
location: region:16487-17431:-1
so has part: feature:16487-17431:-1:exon

WP_225933811.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16487-17431:-1:exon

K0O64_RS30090
type: Gene
subclass of: SO_0000704
RO_0002162: 370524
locus tag: K0O64_RS30090
pseudo: true
so part of: sequence
location: complement(<17944..18003)
location: region:17944-18003:-1
so has part: feature:17944-18003:-1:exon
subclass of: SO_0000010

position:17944:-1
position: 17944
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:18003:-1
position: 18003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17944-18003:-1:exon

K0O64_RS30090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 370524
locus tag: K0O64_RS30090
inference: COORDINATES: protein motif:HMM:NF024908.2
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: K0O64_RS30090
subclass of: SO_0000673
so part of: K0O64_RS30090
location: complement(<17944..18003)
location: region:17944-18003:-1
so has part: feature:17944-18003:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17944-18003:-1:exon

K0O64_RS30240
type: Gene
subclass of: SO_0000704
RO_0002162: 370524
locus tag: K0O64_RS30240
old locus tag: K0O64_29575
so part of: sequence
location: 18155..18550
location: region:18155-18550:1
so has part: feature:18155-18550:1:exon
subclass of: SO_0000010

position:18155:1
position: 18155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18550:1
position: 18550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18155-18550:1:exon

K0O64_RS30240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 370524
locus tag: K0O64_RS30240
old locus tag: K0O64_29575
inference: COORDINATES: protein motif:HMM:NF014814.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MLMAKPALKWSHSPGSRHLVLHVFGALAEFERGINHERTLAGLAAARSRGRIGGRPKVLNNQRLEHAQELAAAGMAVPDIADMLLVGRSTLYRALHEEKKGENEMTTASSIDRVWSIRDAVLKWLYLKAMV
SIO_010081: K0O64_RS30240
subclass of: SO_0000673
so part of: K0O64_RS30240
location: 18155..18550
location: region:18155-18550:1
so has part: feature:18155-18550:1:exon

WP_220046551.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18155-18550:1:exon

K0O64_RS29580
type: Gene
subclass of: SO_0000704
RO_0002162: 370524
locus tag: K0O64_RS29580
old locus tag: K0O64_29580
so part of: sequence
location: 18738..19121
location: region:18738-19121:1
so has part: feature:18738-19121:1:exon
subclass of: SO_0000010

position:18738:1
position: 18738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19121:1
position: 19121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18738-19121:1:exon

K0O64_RS29580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 370524
locus tag: K0O64_RS29580
old locus tag: K0O64_29580
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MADNGISVRGGNKPADPQGVTTIHISNSNNVAIGSPGTHQTYSVTEQVKRALAVADVLELAADGPSESVAEAHRIASEIKDEAAQSKPDSGRLKQLLMSAVAAGSVALGQAAGTDLVHLVSQALQTF
SIO_010081: K0O64_RS29580
subclass of: SO_0000673
so part of: K0O64_RS29580
location: 18738..19121
location: region:18738-19121:1
so has part: feature:18738-19121:1:exon

WP_220046552.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18738-19121:1:exon

K0O64_RS29585
type: Gene
subclass of: SO_0000704
RO_0002162: 370524
locus tag: K0O64_RS29585
old locus tag: K0O64_29585
so part of: sequence
location: complement(19530..19853)
location: region:19530-19853:-1
so has part: feature:19530-19853:-1:exon
subclass of: SO_0000010

position:19530:-1
position: 19530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19853:-1
position: 19853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19530-19853:-1:exon

K0O64_RS29585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 370524
locus tag: K0O64_RS29585
old locus tag: K0O64_29585
inference: COORDINATES: protein motif:HMM:NF017148.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF732 domain-containing protein
translation: MKAAMVIAGAVLIVGVAPQAHADDDDTAYLSALHTVGVPANSPITAPAYGRGLCDRLSQMGFDPLVTMVQHDMATGATKHQSAMVIAAGITSYCLPEVDLLPKTLTY
SIO_010081: K0O64_RS29585
subclass of: SO_0000673
so part of: K0O64_RS29585
location: complement(19530..19853)
location: region:19530-19853:-1
so has part: feature:19530-19853:-1:exon

WP_220046553.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19530-19853:-1:exon

K0O64_RS29590
type: Gene
subclass of: SO_0000704
RO_0002162: 370524
locus tag: K0O64_RS29590
old locus tag: K0O64_29590
so part of: sequence
location: 20140..20847
location: region:20140-20847:1
so has part: feature:20140-20847:1:exon
subclass of: SO_0000010

position:20140:1
position: 20140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20847:1
position: 20847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20140-20847:1:exon

K0O64_RS29590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 370524
locus tag: K0O64_RS29590
old locus tag: K0O64_29590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019857892.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AIM24 family protein
translation: MGQPFSPPRLMPTTVTSGQAPGVGYAIAGELVPTLHVRLDGRVPIFFEHHVVLWKNPDLQIGIHPLRGGFKRVVAGMPIVLTETQSPGEIAFSRDGAGHVFALHLTPGMAIQVREHQYLAATGNLDYSFTRQRGIANMLVGGNGIFVDRFAATDSEGVVWLHGYGNVFEKVLAPGEQIDVEPGGWIYRDDTVAMEVKIYGLKTGMLGGTSLVFNRFTGPGRVGIQSMYLHLPTTD
SIO_010081: K0O64_RS29590
subclass of: SO_0000673
so part of: K0O64_RS29590
location: 20140..20847
location: region:20140-20847:1
so has part: feature:20140-20847:1:exon

WP_220046554.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20140-20847:1:exon

K0O64_RS29595
type: Gene
subclass of: SO_0000704
RO_0002162: 370524
locus tag: K0O64_RS29595
old locus tag: K0O64_29595
so part of: sequence
location: 21440..22549
location: region:21440-22549:1
so has part: feature:21440-22549:1:exon
subclass of: SO_0000010

position:21440:1
position: 21440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22549:1
position: 22549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21440-22549:1:exon

K0O64_RS29595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 370524
locus tag: K0O64_RS29595
old locus tag: K0O64_29595
EC number: 2.7.7.65
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011561819.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GGDEF domain-containing protein
translation: MSVISRRFWQSDHYDWLSGYLAARKMSGPTRAVMAFLSSSFVAGLIVLLTSQDGPREPVTVAMAWIAVIGGLAGMALFAWRWPTRAQSLAFVVVVNTSIALACLAHPNPLAALIGCIAFATSGAYVAFFHSTGWMLYNFGVATIVVTVQAVRVAMTGHPALAWVDWWLIVEVNVALPLGGQILVRALAGDLLRADTDPLTGLLNRRAFHRKALGMIHTRPSNANYLMVMLIDLDNFKALNDTYGHKAGDQALVHAARTLSATADPQAVIARIGGEEFLLATTAPACTAESLATQLCTAIAVTPAAVTASIGAVCTRLDGNTAAAGHDVLLEKLVAAADAAMYSAKRAGGNQVHHPDHHPNTEQRSLRGT
SIO_010081: K0O64_RS29595
subclass of: SO_0000673
so part of: K0O64_RS29595
location: 21440..22549
location: region:21440-22549:1
so has part: feature:21440-22549:1:exon

WP_220046555.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21440-22549:1:exon

K0O64_RS29600
type: Gene
subclass of: SO_0000704
RO_0002162: 370524
locus tag: K0O64_RS29600
old locus tag: K0O64_29600
so part of: sequence
location: complement(22698..24392)
location: region:22698-24392:-1
so has part: feature:22698-24392:-1:exon
subclass of: SO_0000010

position:22698:-1
position: 22698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24392:-1
position: 24392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22698-24392:-1:exon

K0O64_RS29600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 370524
locus tag: K0O64_RS29600
old locus tag: K0O64_29600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003896053.1
GO component: GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO process: GO:0006814 - sodium ion transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium:proton antiporter
translation: MELLLVVVGAIIVAALADRRGLQPALIIVVTGIAASFVPGFRTPELDSHVLLAVILPPLLFSAAVNFSFPTFIRNIRPILGLGVALVMVTAFAVAAVSAWLVVVPLTFGGALVLGAIVAPPDAVTAVAIGRRLGLPKKVMAVLTGESLINDAAALVLFSVAVAQVTGSHTFIANPALLFGYAALLGSAVGAVLGYATLWIRRSLNNPALETVQGLVAPFAAFLLAENVHASGVLAVVAAGFVVGSGTLAAGYQTRLQERYVWNSLDVLLEAFVFAYIGLHLRFVLDDLNEAHESLTSVGLASMIVLAVVVLIRPLSVFVMFGPWLLFQYRDRVATPPAPPLSGRSACATPDTRSPRSGKWWSAIDRRPLSWQDNVVVSWAGMRGVVTLAAAAAVPLTTASGEPFPHRATIQAIAFAVTVGTVLLQGATLPLLIRRLKLAFSEGDTGEDREETLKTERVVHEAAVEVFAHFRAHPPDGLDPQVLDEIRHLVARQSQDADEMPSPENHTLRAEVFASLYREVLRAQRAALIEQRDLGALEEEAVRAMLDRLDLQEAAVSARLERRI
SIO_010081: K0O64_RS29600
subclass of: SO_0000673
so part of: K0O64_RS29600
location: complement(22698..24392)
location: region:22698-24392:-1
so has part: feature:22698-24392:-1:exon

WP_220046556.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22698-24392:-1:exon

K0O64_RS29605
type: Gene
subclass of: SO_0000704
RO_0002162: 370524
locus tag: K0O64_RS29605
old locus tag: K0O64_29605
so part of: sequence
location: 24768..25100
location: region:24768-25100:1
so has part: feature:24768-25100:1:exon
subclass of: SO_0000010

position:24768:1
position: 24768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25100:1
position: 25100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24768-25100:1:exon

K0O64_RS29605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 370524
locus tag: K0O64_RS29605
old locus tag: K0O64_29605
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MITLLEQGHTAFVTDRHGYSDVGIFDLNKVKYLRTYWGDFWDDRLISLPTFDFDVCRHDPAVGSDAQSRRRGVGACVESVQLAASQLIAVTQRRRRHRRESHKRPALART
SIO_010081: K0O64_RS29605
subclass of: SO_0000673
so part of: K0O64_RS29605
location: 24768..25100
location: region:24768-25100:1
so has part: feature:24768-25100:1:exon

WP_220046557.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24768-25100:1:exon

K0O64_RS30210
type: Gene
subclass of: SO_0000704
RO_0002162: 370524
locus tag: K0O64_RS30210
so part of: sequence
location: 25360..25485
location: region:25360-25485:1
so has part: feature:25360-25485:1:exon
subclass of: SO_0000010

position:25360:1
position: 25360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25485:1
position: 25485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25360-25485:1:exon

K0O64_RS30210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 370524
locus tag: K0O64_RS30210
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MALPNEVAYEVAYPAQGCGRVREDAAQGGWLCYGQSCARRR
SIO_010081: K0O64_RS30210
subclass of: SO_0000673
so part of: K0O64_RS30210
location: 25360..25485
location: region:25360-25485:1
so has part: feature:25360-25485:1:exon

WP_269147158.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25360-25485:1:exon

K0O64_RS29610
type: Gene
subclass of: SO_0000704
RO_0002162: 370524
locus tag: K0O64_RS29610
old locus tag: K0O64_29610
so part of: sequence
location: complement(26273..26713)
location: region:26273-26713:-1
so has part: feature:26273-26713:-1:exon
subclass of: SO_0000010

position:26273:-1
position: 26273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26713:-1
position: 26713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26273-26713:-1:exon

K0O64_RS29610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 370524
locus tag: K0O64_RS29610
old locus tag: K0O64_29610
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014712205.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Hsp20 family protein
translation: MLVRSDPFRELDRFTQQVLGTAARPAVMPMDAWREGDDLVVEFDLPGIEEQSLDLDVERNVVTVRAQRPEVDPSRDMLATERPRGVFSRQLVLGDNLDTERIKASYRGGVLRLQIPVAEKAKPRKITVNHGDRQQAIDPGQVIDAG
SIO_010081: K0O64_RS29610
subclass of: SO_0000673
so part of: K0O64_RS29610
location: complement(26273..26713)
location: region:26273-26713:-1
so has part: feature:26273-26713:-1:exon

WP_220046558.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26273-26713:-1:exon

K0O64_RS29615
type: Gene
subclass of: SO_0000704
RO_0002162: 370524
locus tag: K0O64_RS29615
old locus tag: K0O64_29615
so part of: sequence
location: 26868..27167
location: region:26868-27167:1
so has part: feature:26868-27167:1:exon
subclass of: SO_0000010

position:26868:1
position: 26868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27167:1
position: 27167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26868-27167:1:exon

K0O64_RS29615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 370524
locus tag: K0O64_RS29615
old locus tag: K0O64_29615
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020098986.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MerR family transcriptional regulator
translation: MTTPHHTAGPAPDQAVYAISVAAELTGAPIQSIRLWERHGLLTPHRTPGGTRRYSANDLARITRITALAGAGINITGIGRILDLEDTNTALRARYGDGG
SIO_010081: K0O64_RS29615
subclass of: SO_0000673
so part of: K0O64_RS29615
location: 26868..27167
location: region:26868-27167:1
so has part: feature:26868-27167:1:exon

WP_220046559.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26868-27167:1:exon

K0O64_RS29620
type: Gene
subclass of: SO_0000704
RO_0002162: 370524
locus tag: K0O64_RS29620
old locus tag: K0O64_29620
pseudo: true
so part of: sequence
location: <27228..28145
location: region:27228-28145:1
so has part: feature:27228-28145:1:exon
subclass of: SO_0000010

position:27228:1
position: 27228
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:28145:1
position: 28145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27228-28145:1:exon

K0O64_RS29620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 370524
locus tag: K0O64_RS29620
old locus tag: K0O64_29620
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005142312.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - DNA transposition [Evidence IEA]
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: K0O64_RS29620
subclass of: SO_0000673
so part of: K0O64_RS29620
location: <27228..28145
location: region:27228-28145:1
so has part: feature:27228-28145:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27228-28145:1:exon

K0O64_RS29625
type: Gene
subclass of: SO_0000704
RO_0002162: 370524
locus tag: K0O64_RS29625
old locus tag: K0O64_29625
so part of: sequence
location: complement(28182..28916)
location: region:28182-28916:-1
so has part: feature:28182-28916:-1:exon
subclass of: SO_0000010

position:28182:-1
position: 28182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28916:-1
position: 28916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28182-28916:-1:exon

K0O64_RS29625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 370524
locus tag: K0O64_RS29625
old locus tag: K0O64_29625
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020549824.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TetR/AcrR family transcriptional regulator
translation: MRRRPATTGVTGSIGPRKPPITTERITAAALQVVASQGYDALTIRSVSSALDTGPSSLYAHISTKADLDDLLIGDLCSRLTLPTPDSSRWREQIRHVCVQLRDQYLAYPGISRAALAMAPGNTDTARVSEAMLSIMLVGGIEPQTAAWSIDALALYIAGYALERSMVGLRQKDPDVSWVLDQTELLGRLHALPETDFPNTRRYATELTSGTEHERFDFTIGLIIDNLDLHGSPPHGPNYFVDRR
SIO_010081: K0O64_RS29625
subclass of: SO_0000673
so part of: K0O64_RS29625
location: complement(28182..28916)
location: region:28182-28916:-1
so has part: feature:28182-28916:-1:exon

WP_220046572.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28182-28916:-1:exon