Suricata suricatta isolate VVHF042 chromosome 15, meerkat_22Aug2017_6uvM2_HiC, whole genome shotgun sequence.
type: Entry
definition: Suricata suricatta isolate VVHF042 chromosome 15, meerkat_22Aug2017_6uvM2_HiC, whole genome shotgun sequence.
sequence version: NC_043714.1
sequence date: 2019-07-15
sequence: sequence
division: CON
label: NC_043714.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA553468
dblink: SAMN11840572
keyword: WGS
keyword: RefSeq
source: Suricata suricatta (meerkat)
organism: Suricata suricatta
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Herpestidae; Suricata.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM016985.1.\nAssembly name: meerkat_22Aug2017_6uvM2_HiC\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the DNA Zoo on 2019/07/03. The\noriginal whole-genome shotgun project has the accession\nVCRZ00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: DNA Zoo\nAssembly Method :: 3-D DNA Pipeline v. AUGUST-2017\nAssembly Name :: meerkat_22Aug2017_6uvM2_HiC\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 50.0x\nSequencing Technology :: Illumina HiSeq; Illumina X10\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Suricata suricatta Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 78599426
topology: linear
so has quality: SO_0000987
location: 1..78599426
location: region:1-78599426:1
RO_0002162: 37032

NC_043714
type: RefSeq
SIO_000068: refseq

PRJNA553468
type: BioProject
SIO_000068: bioproject

SAMN11840572
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78599426:1
position: 78599426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-78599426:1:source
so part of: sequence
organism: Suricata suricatta
mol type: genomic DNA
isolate: VVHF042
chromosome: 15
country: South Africa: Kalahari Meerkat Project
lat lon: 26.98 S 21.83 E
collection date: 02-Feb-2016

37032
type: Taxonomy
SIO_000068: taxonomy

SPIDR
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: SPIDR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <12697..440330
location: region:12697-440330:1
so has part: feature:12697-440330:1:exon
subclass of: SO_0000010

115279434
type: Gene
SIO_000068: ncbigene

position:12697:1
position: 12697
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:440330:1
position: 440330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12697-440330:1:exon

SPIDR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: SPIDR
product: scaffold protein involved in DNA repair
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_029923996.1
SIO_010081: SPIDR
subclass of: SO_0000673
so part of: SPIDR
location: join(<12697..12852,13505..13568,17454..17627,25028..25191,142794..143038,156424..156524,190812..191025,309139..309334,310992..311239,376994..377134,408731..408818,410406..410549,410640..410699,417873..418059,418760..418912,432946..433039,433963..434077,434316..434369,439654..440330)
location: region:12697-440330:1
so has part: feature:12697-12852:1:exon
so has part: feature:13505-13568:1:exon
so has part: feature:17454-17627:1:exon
so has part: feature:25028-25191:1:exon
so has part: feature:142794-143038:1:exon
so has part: feature:156424-156524:1:exon
so has part: feature:190812-191025:1:exon
so has part: feature:309139-309334:1:exon
so has part: feature:310992-311239:1:exon
so has part: feature:376994-377134:1:exon
so has part: feature:408731-408818:1:exon
so has part: feature:410406-410549:1:exon
so has part: feature:410640-410699:1:exon
so has part: feature:417873-418059:1:exon
so has part: feature:418760-418912:1:exon
so has part: feature:432946-433039:1:exon
so has part: feature:433963-434077:1:exon
so has part: feature:434316-434369:1:exon
so has part: feature:439654-440330:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12697-12852:1:exon

position:12852:1
position: 12852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13505-13568:1:exon

position:13505:1
position: 13505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13568:1
position: 13568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:17454-17627:1:exon

position:17454:1
position: 17454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17627:1
position: 17627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:25028-25191:1:exon

position:25028:1
position: 25028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25191:1
position: 25191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:142794-143038:1:exon

position:142794:1
position: 142794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143038:1
position: 143038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:156424-156524:1:exon

position:156424:1
position: 156424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156524:1
position: 156524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:190812-191025:1:exon

position:190812:1
position: 190812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191025:1
position: 191025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:309139-309334:1:exon

position:309139:1
position: 309139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309334:1
position: 309334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:310992-311239:1:exon

position:310992:1
position: 310992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311239:1
position: 311239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:376994-377134:1:exon

position:376994:1
position: 376994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377134:1
position: 377134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:408731-408818:1:exon

position:408731:1
position: 408731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408818:1
position: 408818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:410406-410549:1:exon

position:410406:1
position: 410406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:410549:1
position: 410549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:410640-410699:1:exon

position:410640:1
position: 410640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:410699:1
position: 410699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:417873-418059:1:exon

position:417873:1
position: 417873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:418059:1
position: 418059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:418760-418912:1:exon

position:418760:1
position: 418760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:418912:1
position: 418912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:432946-433039:1:exon

position:432946:1
position: 432946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433039:1
position: 433039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:433963-434077:1:exon

position:433963:1
position: 433963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434077:1
position: 434077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:434316-434369:1:exon

position:434316:1
position: 434316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434369:1
position: 434369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:439654-440330:1:exon

position:439654:1
position: 439654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPIDR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: SPIDR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA repair-scaffolding protein
translation: RKRNWTREYPSFPGGSPLKFRRPGLRTVGTAASLSEAWLRCGEGFQDTSGTQLTAEKKIVTEKHLELSLRPKEETAVSKSTCGLTDTTWRSGGSDVSDEDKSQRDHECGSGIDRFCNRNKNIVCTEDGASEDELQCIDWETDSDREDISECNDFEDCERAVEISDCASCSSSHSSTSHEGLSEPLKKNSTEILEYSSDSEKEDDSENVLVIDSESSPKNHMDFGSDVREVKEKLVRQKVKSGDTTLYAHQKQTFPRTPEPSAKKKFLRGGLAERLNGLHNRERSLISLWRHQCVSYQRTLSGRKSGILIVKILELHEECTFQVAVCEQLAGLQADSPSPGEAPRTGLKVLFTKETACHLRGRPQDVVCIYPPWQKLIIPNGSFPVILNTYFCQKIVAKEDSKTIREVYSWGTPLPRRSITLDHMFIFKCLTTASPESQVMCAGLPTVRTDCTHGHEESKQYLPPQNSLRGSLLDVVESQGAATWSGVGVRVVVQRVYSLACSDQQGGSSAVPPAPDPSRVRLCLLVQDAYGMFSEVHCEGTGLEDQQLEGKPCSLMGMKVLQKATRGRSAGLFSLIDTMWPPGMLLEAAGRGQACEEVKAHGPPPSFCYVLAAHPDMGQIDPIEDDPISKLYQPPVPRVLREILQTDDLSTRCSFYARVIYQRSQQRETWLVVTDVSLQGQEGNDPGLPKTVSVCVAPSCVLSRAVLDALTQAASHSFLFRDTLRAHGQIVCAERSVLLLQKTPLSAASSVPSCELTSPVQLSKLDSVTQVNSVCSVQGTVVGVDESTAFSWPTCDLCGNERLEQSPGHRGSFSCGDCSRVVSSPVLRRHLEVFLACPSRPQCTVKVKLSQPSISSLLSVAAGEDGSYEVRSVLGQEVGPLPCVVRSVSAHPAGGVRLEEVELLTAGRASSQPGRRP
SIO_010081: SPIDR
subclass of: SO_0000673
so part of: SPIDR
location: join(<12697..12852,13505..13568,17454..17627,25028..25191,142794..143038,156424..156524,190812..191025,309139..309334,310992..311239,376994..377134,408731..408818,410406..410549,410640..410699,417873..418059,418760..418912,432946..433039,433963..434077,434316..434369,439654..439809)
location: region:12697-439809:1
so has part: feature:12697-12852:1:exon
so has part: feature:13505-13568:1:exon
so has part: feature:17454-17627:1:exon
so has part: feature:25028-25191:1:exon
so has part: feature:142794-143038:1:exon
so has part: feature:156424-156524:1:exon
so has part: feature:190812-191025:1:exon
so has part: feature:309139-309334:1:exon
so has part: feature:310992-311239:1:exon
so has part: feature:376994-377134:1:exon
so has part: feature:408731-408818:1:exon
so has part: feature:410406-410549:1:exon
so has part: feature:410640-410699:1:exon
so has part: feature:417873-418059:1:exon
so has part: feature:418760-418912:1:exon
so has part: feature:432946-433039:1:exon
so has part: feature:433963-434077:1:exon
so has part: feature:434316-434369:1:exon
so has part: feature:439654-439809:1:exon

XP_029779856.1
type: Protein
SIO_000068: ncbiprotein

position:439809:1
position: 439809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12697-12852:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13505-13568:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17454-17627:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:25028-25191:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:142794-143038:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:156424-156524:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:190812-191025:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:309139-309334:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:310992-311239:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:376994-377134:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:408731-408818:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:410406-410549:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:410640-410699:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:417873-418059:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:418760-418912:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:432946-433039:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:433963-434077:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:434316-434369:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:439654-439809:1:exon

LOC115278692
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115278692
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(244701..251091)
location: region:244701-251091:-1
so has part: feature:244701-251091:-1:exon
subclass of: SO_0000011

115278692
type: Gene
SIO_000068: ncbigene

position:244701:-1
position: 244701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251091:-1
position: 251091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244701-251091:-1:exon

LOC115278692
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115278692
product: uncharacterized LOC115278692, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003903039.1
SIO_010081: LOC115278692
subclass of: SO_0000673
so part of: LOC115278692
location: complement(join(244701..245982,246621..247222,250892..251091))
location: region:244701-251091:-1
so has part: feature:250892-251091:-1:exon
so has part: feature:246621-247222:-1:exon
so has part: feature:244701-245982:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:250892-251091:-1:exon

position:250892:-1
position: 250892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:246621-247222:-1:exon

position:246621:-1
position: 246621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247222:-1
position: 247222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:244701-245982:-1:exon

position:245982:-1
position: 245982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115278692
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115278692
product: uncharacterized LOC115278692, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003903038.1
SIO_010081: LOC115278692
subclass of: SO_0000673
so part of: LOC115278692
location: complement(join(244701..247222,250892..251091))
location: region:244701-251091:-1
so has part: feature:250892-251091:-1:exon
so has part: feature:244701-247222:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:250892-251091:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:244701-247222:-1:exon

LOC115278691
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115278691
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 352373..353933
location: region:352373-353933:1
so has part: feature:352373-353933:1:exon
subclass of: SO_0000011

115278691
type: Gene
SIO_000068: ncbigene

position:352373:1
position: 352373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353933:1
position: 353933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352373-353933:1:exon

LOC115278691
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115278691
product: uncharacterized LOC115278691
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003903037.1
SIO_010081: LOC115278691
subclass of: SO_0000673
so part of: LOC115278691
location: join(352373..352492,353615..353671,353759..353933)
location: region:352373-353933:1
so has part: feature:352373-352492:1:exon
so has part: feature:353615-353671:1:exon
so has part: feature:353759-353933:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:352373-352492:1:exon

position:352492:1
position: 352492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:353615-353671:1:exon

position:353615:1
position: 353615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353671:1
position: 353671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:353759-353933:1:exon

position:353759:1
position: 353759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115279555
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115279555
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 364739..364842
location: region:364739-364842:1
so has part: feature:364739-364842:1:exon
subclass of: SO_0000623

115279555
type: Gene
SIO_000068: ncbigene

position:364739:1
position: 364739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364842:1
position: 364842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364739-364842:1:exon

LOC115279555
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: snRNA
gene: LOC115279555
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003903510.1
SIO_010081: LOC115279555
subclass of: SO_0000673
so part of: LOC115279555
location: 364739..364842
location: region:364739-364842:1
so has part: feature:364739-364842:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:364739-364842:1:exon

PRKDC
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: PRKDC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(453200..636282)
location: region:453200-636282:-1
so has part: feature:453200-636282:-1:exon
subclass of: SO_0000010

115278690
type: Gene
SIO_000068: ncbigene

position:453200:-1
position: 453200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:636282:-1
position: 636282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453200-636282:-1:exon

PRKDC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: PRKDC
product: protein kinase, DNA-activated, catalytic subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029923172.1
SIO_010081: PRKDC
subclass of: SO_0000673
so part of: PRKDC
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location: region:453200-636282:-1
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type: ExactPosition

position:518829:-1
position: 518829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 60
SIO_000628: feature:516511-516642:-1:exon

position:516511:-1
position: 516511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:516642:-1
position: 516642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 61
SIO_000628: feature:512955-513134:-1:exon

position:512955:-1
position: 512955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:513134:-1
position: 513134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 62
SIO_000628: feature:508794-508999:-1:exon

position:508794:-1
position: 508794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:508999:-1
position: 508999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 63
SIO_000628: feature:506863-507001:-1:exon

position:506863:-1
position: 506863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:507001:-1
position: 507001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 64
SIO_000628: feature:505816-506004:-1:exon

position:505816:-1
position: 505816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:506004:-1
position: 506004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 65
SIO_000628: feature:504940-505164:-1:exon

position:504940:-1
position: 504940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505164:-1
position: 505164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 66
SIO_000628: feature:503979-504087:-1:exon

position:503979:-1
position: 503979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:504087:-1
position: 504087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 67
SIO_000628: feature:502369-502480:-1:exon

position:502369:-1
position: 502369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502480:-1
position: 502480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 68
SIO_000628: feature:489937-490126:-1:exon

position:489937:-1
position: 489937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:490126:-1
position: 490126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 69
SIO_000628: feature:485730-485904:-1:exon

position:485730:-1
position: 485730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485904:-1
position: 485904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 70
SIO_000628: feature:484215-484405:-1:exon

position:484215:-1
position: 484215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:484405:-1
position: 484405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 71
SIO_000628: feature:483285-483444:-1:exon

position:483285:-1
position: 483285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:483444:-1
position: 483444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 72
SIO_000628: feature:482352-482512:-1:exon

position:482352:-1
position: 482352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482512:-1
position: 482512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 73
SIO_000628: feature:476202-476413:-1:exon

position:476202:-1
position: 476202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:476413:-1
position: 476413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 74
SIO_000628: feature:474140-474227:-1:exon

position:474140:-1
position: 474140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:474227:-1
position: 474227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 75
SIO_000628: feature:473904-474047:-1:exon

position:473904:-1
position: 473904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:474047:-1
position: 474047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 76
SIO_000628: feature:462907-463111:-1:exon

position:462907:-1
position: 462907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:463111:-1
position: 463111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 77
SIO_000628: feature:461694-461761:-1:exon

position:461694:-1
position: 461694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461761:-1
position: 461761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 78
SIO_000628: feature:460689-460909:-1:exon

position:460689:-1
position: 460689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460909:-1
position: 460909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 79
SIO_000628: feature:460296-460388:-1:exon

position:460296:-1
position: 460296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460388:-1
position: 460388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 80
SIO_000628: feature:457474-457563:-1:exon

position:457474:-1
position: 457474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457563:-1
position: 457563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 81
SIO_000628: feature:456900-456971:-1:exon

position:456900:-1
position: 456900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456971:-1
position: 456971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 82
SIO_000628: feature:456626-456827:-1:exon

position:456626:-1
position: 456626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456827:-1
position: 456827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 83
SIO_000628: feature:455587-455775:-1:exon

position:455587:-1
position: 455587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455775:-1
position: 455775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 84
SIO_000628: feature:454913-455052:-1:exon

position:454913:-1
position: 454913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455052:-1
position: 455052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 85
SIO_000628: feature:453200-453774:-1:exon

position:453774:-1
position: 453774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PRKDC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: PRKDC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-dependent protein kinase catalytic subunit
translation: MADSGSGVQGSLLQLQKSLSVSDRCSAAVASYQLIRGLGQECVLSSGPAVLALQTSLVFSKDFGLLVFVRKSLSMDEFRDCREEVLKFLCVFLEKIGQKITPYSLDIKNTCTSVYTKDKAAKCRISALDLLIKLFRALRSSRLMDEFGIGELFIKFYGELASKTRIQDTVLEKIYELLGVLGEVHPSEMINNSENLFRAFLGELKIQMTSALREPKLPIVAGCLKGLSSLMCNFTKSMEEDPQTSREIFDFTLKAIRPQIDLKRYAVPLAGLCLLTLHAPQFGTCLLDNHVSLFEVLSKWCSHTNVEVKKAAHSALESFLKQISSMVAKDAEMHKSKLQYFMEQFYGIIRNVDSNSKDLSIAIRGYGLFAGPCKVINAEDVDFMYVELVQRCKQLFLAQTDAVDEHIYHMPSFLQSIASVLLYLDTVPEVYTPVLEHLIVAQIDSFPQYSPKMQSVCCKAIVTVFLALQGKGPALWNRIGAVVHQGLIRICSKPVILQKGAESASEDDRASGEVRTGRWKVPTYKDYLDLFRSLLSCDQMMDSLLADEAFLIVNSSLQSLNRLLYDEFVKSVLKIIEKLDLTLEKQNIGGQEDENEATGVWVIPTSDPAANLHPAKPKDFSAFISLVEICREILPEKHVEFFEPWVYLFAYELILQSARLPLVSGFYKLLSVAVRNARKIKYFEGVCLKSQTQSPEDPEKYSCFALFAKFGKEVSVKMKQYKDELLASCLSFILSLPPDIIELDIKAYVPALQMAFKLGLSYTPLAEAGLNALAEWSAHIREHVMQPCYRDILPSLDGYLKTSASPDEATNNWEVSALSRAAQKGFNKVVLKHLKKTKNISSSEVLSLEEVRVRVVQMLGLLGGQINRHLLTATSSDDMMKKYVAWDREKRLSFAVPFVEMKPVIYLDVFLPRVTELALSAGDRQTKVAACELLHSMVMFMLGKATQMPESGQGFPPMYQLYKRTFPVLLRLACDVDQVTRQLYEPLVMQLIHWFTNNKKFESQDTVALLETILDGIVDPVDSTLRDFCGRCVREFLKWSIKQTTPQQQEKSPVNTKSLFKRLYSFALHPNAFKRLGASLAFNNIYREFREEESLVEQFVFEALVTYLESLALAHTDEKSLGTVQQCCDAIDHLRRIIEEKHVSLNKARKRRRPRGFPPTSTTLCLLDVVHWLLTCCGRPQTECRHKSMELFYKFVPLLPGNKSPALWLKEVLQNKDISFLMHTFEGGGGSCARPSGIRAQPTLLHLPGPFSLRAALQWADMLLAALECYNTFAGERAVEAPEVLGTETQSSLWKAVTFFLESIAMYDITAAEKCFGAGAIGRRPSPQEEERYNYSKCTIVVRILEFTTTLLSVSPEGWKLLEDLCNNTNLMKLLVKTVCEPSSIGFNTGDVLVMSHLPDVCVSLMRALKKSPFRALLETYLQEEITAQSIEELCAVDLCGPDASVDRARLASVLSACEQLHRAGLLHVVLASQSADQCPVGTKLLHLVYESVAPGDDQQRLPSLDPGCRRLASGLLELAFASGVPCERLVSLLLETAVWSVPRAGASRGDPLSCCHGEYFYSLFSETINTELLKNPDLAVLELMKSSVDNPKMVSAVLNGMLDQSFRDRASQKHQGLRLTSTILHNWRTWDSWWARESAPESKTAVLTLLAKILQIDPSFNTNHSAFSEVFTTYVSLLGDSKLGLHLKGQAVILLPFFTNLTGGSLEDLKHVLEKLIVSNFPMKSEEFPPGTLRYNNYVDCMKKFLDALELSQSPVLLQLMTEILCREQQHVMEELFQSTFKKIAGKSSCVTQLALLESVYTMFKRDDLLSNVTRQAFVDRSLLTLLRHCSLNALREFFSKIVVDAVDVLKSRFTKLNESAFDTQITKKMGCYKILDVMYSRLPKDDVHSKESKINQVFHGSCVTEGSELTKTLIKLCYDAFTENMAGENQLLETRRRYHCAAYNCAISVICCVFTELRFYQGFLFSEKPEKNLLIFENLIDLKRCYTFPVEVEVPMER…
SIO_010081: PRKDC
subclass of: SO_0000673
so part of: PRKDC
location: complement(join(453570..453774,454913..455052,455587..455775,456626..456827,456900..456971,457474..457563,460296..460388,460689..460909,461694..461761,462907..463111,473904..474047,474140..474227,476202..476413,482352..482512,483285..483444,484215..484405,485730..485904,489937..490126,502369..502480,503979..504087,504940..505164,505816..506004,506863..507001,508794..508999,512955..513134,516511..516642,518717..518829,521779..521991,523506..523695,525260..525560,526834..527007,528355..528504,528589..528713,531272..531383,532730..532861,533443..533594,535684..535827,541901..542020,542629..542763,545292..545440,546484..546556,547856..547921,548171..548339,550168..550346,553339..553546,557308..557435,559051..559218,560292..560390,560756..560941,569565..569768,570587..570742,571178..571310,571666..571874,572584..572807,575784..576038,579659..579795,581323..581422,582817..582911,590183..590409,592688..592795,594467..594619,595318..595481,596273..596363,598892..598998,609467..609626,610831..610950,611596..611682,612661..612820,613364..613479,614780..614932,616440..616565,617429..617478,617809..617977,618650..618814,620340..620486,623998..624155,624622..624652,624736..624791,630809..630908,631001..631113,631837..631945,632681..632755,634365..634457,634554..634630,636121..636274))
location: region:453570-636274:-1
so has part: feature:636121-636274:-1:exon
so has part: feature:634554-634630:-1:exon
so has part: feature:634365-634457:-1:exon
so has part: feature:632681-632755:-1:exon
so has part: feature:631837-631945:-1:exon
so has part: feature:631001-631113:-1:exon
so has part: feature:630809-630908:-1:exon
so has part: feature:624736-624791:-1:exon
so has part: feature:624622-624652:-1:exon
so has part: feature:623998-624155:-1:exon
so has part: feature:620340-620486:-1:exon
so has part: feature:618650-618814:-1:exon
so has part: feature:617809-617977:-1:exon
so has part: feature:617429-617478:-1:exon
so has part: feature:616440-616565:-1:exon
so has part: feature:614780-614932:-1:exon
so has part: feature:613364-613479:-1:exon
so has part: feature:612661-612820:-1:exon
so has part: feature:611596-611682:-1:exon
so has part: feature:610831-610950:-1:exon
so has part: feature:609467-609626:-1:exon
so has part: feature:598892-598998:-1:exon
so has part: feature:596273-596363:-1:exon
so has part: feature:595318-595481:-1:exon
so has part: feature:594467-594619:-1:exon
so has part: feature:592688-592795:-1:exon
so has part: feature:590183-590409:-1:exon
so has part: feature:582817-582911:-1:exon
so has part: feature:581323-581422:-1:exon
so has part: feature:579659-579795:-1:exon
so has part: feature:575784-576038:-1:exon
so has part: feature:572584-572807:-1:exon
so has part: feature:571666-571874:-1:exon
so has part: feature:571178-571310:-1:exon
so has part: feature:570587-570742:-1:exon
so has part: feature:569565-569768:-1:exon
so has part: feature:560756-560941:-1:exon
so has part: feature:560292-560390:-1:exon
so has part: feature:559051-559218:-1:exon
so has part: feature:557308-557435:-1:exon
so has part: feature:553339-553546:-1:exon
so has part: feature:550168-550346:-1:exon
so has part: feature:548171-548339:-1:exon
so has part: feature:547856-547921:-1:exon
so has part: feature:546484-546556:-1:exon
so has part: feature:545292-545440:-1:exon
so has part: feature:542629-542763:-1:exon
so has part: feature:541901-542020:-1:exon
so has part: feature:535684-535827:-1:exon
so has part: feature:533443-533594:-1:exon
so has part: feature:532730-532861:-1:exon
so has part: feature:531272-531383:-1:exon
so has part: feature:528589-528713:-1:exon
so has part: feature:528355-528504:-1:exon
so has part: feature:526834-527007:-1:exon
so has part: feature:525260-525560:-1:exon
so has part: feature:523506-523695:-1:exon
so has part: feature:521779-521991:-1:exon
so has part: feature:518717-518829:-1:exon
so has part: feature:516511-516642:-1:exon
so has part: feature:512955-513134:-1:exon
so has part: feature:508794-508999:-1:exon
so has part: feature:506863-507001:-1:exon
so has part: feature:505816-506004:-1:exon
so has part: feature:504940-505164:-1:exon
so has part: feature:503979-504087:-1:exon

XP_029779032.1
type: Protein
SIO_000068: ncbiprotein

position:453570:-1
position: 453570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:636274:-1
position: 636274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:636121-636274:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:634554-634630:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:634365-634457:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:632681-632755:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:631837-631945:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:631001-631113:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:630809-630908:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:624736-624791:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:624622-624652:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:623998-624155:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:620340-620486:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:618650-618814:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:617809-617977:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:617429-617478:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:616440-616565:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:614780-614932:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:613364-613479:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:612661-612820:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:611596-611682:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:610831-610950:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:609467-609626:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:598892-598998:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:596273-596363:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:595318-595481:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:594467-594619:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:592688-592795:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:590183-590409:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:582817-582911:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:581323-581422:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:579659-579795:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:575784-576038:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:572584-572807:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:571666-571874:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:571178-571310:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:570587-570742:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:569565-569768:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:560756-560941:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:560292-560390:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:559051-559218:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:557308-557435:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:553339-553546:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:550168-550346:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:548171-548339:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:547856-547921:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:546484-546556:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:545292-545440:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:542629-542763:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:541901-542020:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:535684-535827:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:533443-533594:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:532730-532861:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:531272-531383:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:528589-528713:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:528355-528504:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:526834-527007:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:525260-525560:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:523506-523695:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:521779-521991:-1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:518717-518829:-1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:516511-516642:-1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:512955-513134:-1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:508794-508999:-1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:506863-507001:-1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:505816-506004:-1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:504940-505164:-1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:503979-504087:-1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:502369-502480:-1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:489937-490126:-1:exon

urn:…
SIO_000300: 69
SIO_000628: feature:485730-485904:-1:exon

urn:…
SIO_000300: 70
SIO_000628: feature:484215-484405:-1:exon

urn:…
SIO_000300: 71
SIO_000628: feature:483285-483444:-1:exon

urn:…
SIO_000300: 72
SIO_000628: feature:482352-482512:-1:exon

urn:…
SIO_000300: 73
SIO_000628: feature:476202-476413:-1:exon

urn:…
SIO_000300: 74
SIO_000628: feature:474140-474227:-1:exon

urn:…
SIO_000300: 75
SIO_000628: feature:473904-474047:-1:exon

urn:…
SIO_000300: 76
SIO_000628: feature:462907-463111:-1:exon

urn:…
SIO_000300: 77
SIO_000628: feature:461694-461761:-1:exon

urn:…
SIO_000300: 78
SIO_000628: feature:460689-460909:-1:exon

urn:…
SIO_000300: 79
SIO_000628: feature:460296-460388:-1:exon

urn:…
SIO_000300: 80
SIO_000628: feature:457474-457563:-1:exon

urn:…
SIO_000300: 81
SIO_000628: feature:456900-456971:-1:exon

urn:…
SIO_000300: 82
SIO_000628: feature:456626-456827:-1:exon

urn:…
SIO_000300: 83
SIO_000628: feature:455587-455775:-1:exon

urn:…
SIO_000300: 84
SIO_000628: feature:454913-455052:-1:exon

urn:…
SIO_000300: 85
SIO_000628: feature:453570-453774:-1:exon

LOC115279558
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115279558
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 569385..569520
location: region:569385-569520:1
so has part: feature:569385-569520:1:exon

115279558
type: Gene
SIO_000068: ncbigene

position:569385:1
position: 569385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:569520:1
position: 569520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:569385-569520:1:exon

LOC115279558
type: Exon
subclass of: SO_0000147
RO_0002162: 37032
gene: LOC115279558
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00091
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC115279558
subclass of: SO_0000673
so part of: LOC115279558
location: 569385..569520
location: region:569385-569520:1
so has part: feature:569385-569520:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:569385-569520:1:exon

LOC115278693
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115278693
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 575724..590889
location: region:575724-590889:1
so has part: feature:575724-590889:1:exon
subclass of: SO_0000011

115278693
type: Gene
SIO_000068: ncbigene

position:575724:1
position: 575724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:590889:1
position: 590889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:575724-590889:1:exon

LOC115278693
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115278693
product: uncharacterized LOC115278693, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003903040.1
SIO_010081: LOC115278693
subclass of: SO_0000673
so part of: LOC115278693
location: join(575724..576026,587060..587134,590295..590421,590727..590889)
location: region:575724-590889:1
so has part: feature:575724-576026:1:exon
so has part: feature:587060-587134:1:exon
so has part: feature:590295-590421:1:exon
so has part: feature:590727-590889:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:575724-576026:1:exon

position:576026:1
position: 576026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:587060-587134:1:exon

position:587060:1
position: 587060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:587134:1
position: 587134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:590295-590421:1:exon

position:590295:1
position: 590295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:590421:1
position: 590421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:590727-590889:1:exon

position:590727:1
position: 590727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115278693
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115278693
product: uncharacterized LOC115278693, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003903041.1
SIO_010081: LOC115278693
subclass of: SO_0000673
so part of: LOC115278693
location: join(575724..576026,587060..587134,590727..590889)
location: region:575724-590889:1
so has part: feature:575724-576026:1:exon
so has part: feature:587060-587134:1:exon
so has part: feature:590727-590889:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:575724-576026:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:587060-587134:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:590727-590889:1:exon

MCM4
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: MCM4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 636951..653814
location: region:636951-653814:1
so has part: feature:636951-653814:1:exon
subclass of: SO_0000010

115279302
type: Gene
SIO_000068: ncbigene

position:636951:1
position: 636951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:653814:1
position: 653814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:636951-653814:1:exon

MCM4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: MCM4
product: minichromosome maintenance complex component 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_029923860.1
SIO_010081: MCM4
subclass of: SO_0000673
so part of: MCM4
location: join(636951..637020,637170..637253,637636..637800,638151..638314,638407..638508,638706..638801,638881..638976,640581..640719,642883..643103,644885..645005,646946..647205,647634..647999,648449..648576,649706..649913,651120..651348,651844..651977,653093..653814)
location: region:636951-653814:1
so has part: feature:636951-637020:1:exon
so has part: feature:637170-637253:1:exon
so has part: feature:637636-637800:1:exon
so has part: feature:638151-638314:1:exon
so has part: feature:638407-638508:1:exon
so has part: feature:638706-638801:1:exon
so has part: feature:638881-638976:1:exon
so has part: feature:640581-640719:1:exon
so has part: feature:642883-643103:1:exon
so has part: feature:644885-645005:1:exon
so has part: feature:646946-647205:1:exon
so has part: feature:647634-647999:1:exon
so has part: feature:648449-648576:1:exon
so has part: feature:649706-649913:1:exon
so has part: feature:651120-651348:1:exon
so has part: feature:651844-651977:1:exon
so has part: feature:653093-653814:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:636951-637020:1:exon

position:637020:1
position: 637020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:637170-637253:1:exon

position:637170:1
position: 637170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:637253:1
position: 637253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:637636-637800:1:exon

position:637636:1
position: 637636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:637800:1
position: 637800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:638151-638314:1:exon

position:638151:1
position: 638151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:638314:1
position: 638314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:638407-638508:1:exon

position:638407:1
position: 638407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:638508:1
position: 638508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:638706-638801:1:exon

position:638706:1
position: 638706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:638801:1
position: 638801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:638881-638976:1:exon

position:638881:1
position: 638881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:638976:1
position: 638976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:640581-640719:1:exon

position:640581:1
position: 640581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:640719:1
position: 640719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:642883-643103:1:exon

position:642883:1
position: 642883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:643103:1
position: 643103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:644885-645005:1:exon

position:644885:1
position: 644885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:645005:1
position: 645005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:646946-647205:1:exon

position:646946:1
position: 646946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:647205:1
position: 647205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:647634-647999:1:exon

position:647634:1
position: 647634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:647999:1
position: 647999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:648449-648576:1:exon

position:648449:1
position: 648449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:648576:1
position: 648576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:649706-649913:1:exon

position:649706:1
position: 649706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:649913:1
position: 649913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:651120-651348:1:exon

position:651120:1
position: 651120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:651348:1
position: 651348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:651844-651977:1:exon

position:651844:1
position: 651844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:651977:1
position: 651977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:653093-653814:1:exon

position:653093:1
position: 653093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MCM4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: MCM4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA replication licensing factor MCM4
translation: MSSPASTPSRRGSRRGRVTPAQTPRSEDARSSPYRRRRGEDSTSTGELQPMPTSPGADLQSPAAQDALFSSPAQLHSSAIPLDFDVSSPLTYGTPSSRVEGTPRSAVRGTPVRQRPDLGSARKGLQVDLQSDVPAAEDTVGSEQSLGQKLVIWGTDVNVATCKENFQRFLKHFIDPLAKEEENIGIDITEPLYMQRLGEINVTGEPFLNVNCEHIKSFDKSLYRQLICYPQEVIPTFDMAVNEIFFDCYPDSILEHQIQVRPFNALKTKNMRNLNPEDIDQLIAISGMVIRTSQLIPEMQEAFFQCQVCAHTARVEIDRGRIAEPSVCERCHTTHSMALIHNRSVFSDKQMIKLQESPEDMPAGQTPHTVILFAHNDLVDKVQPGDRVNVTGIYRAVPIRVNSRVSNVKSVYKTHIDVIHYRKTDAKRLHGLDEEAEQKLFSEKRVELLKELSRKPDIYERLASALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYHLVPRGQYTSGKGSSAVGLTAYVTKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSILAAANPTESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVALYYQSEEQAEEEFLDMAVLKDYIAYAHSTVVPRLSQEASQALIEAYVDMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNQVEAVDVEEAKRLHREALKQSATDPRTGIVDISILTTGMSATSRKRKEELAEALKKLILSKGKTPALKYQQLFEDIRGQSDIAITKDMFEEALRALADEDFLTVTGRTVRLL
SIO_010081: MCM4
subclass of: SO_0000673
so part of: MCM4
location: join(637184..637253,637636..637800,638151..638314,638407..638508,638706..638801,638881..638976,640581..640719,642883..643103,644885..645005,646946..647205,647634..647999,648449..648576,649706..649913,651120..651348,651844..651977,653093..653185)
location: region:637184-653185:1
so has part: feature:637184-637253:1:exon
so has part: feature:637636-637800:1:exon
so has part: feature:638151-638314:1:exon
so has part: feature:638407-638508:1:exon
so has part: feature:638706-638801:1:exon
so has part: feature:638881-638976:1:exon
so has part: feature:640581-640719:1:exon
so has part: feature:642883-643103:1:exon
so has part: feature:644885-645005:1:exon
so has part: feature:646946-647205:1:exon
so has part: feature:647634-647999:1:exon
so has part: feature:648449-648576:1:exon
so has part: feature:649706-649913:1:exon
so has part: feature:651120-651348:1:exon
so has part: feature:651844-651977:1:exon
so has part: feature:653093-653185:1:exon

XP_029779720.1
type: Protein
SIO_000068: ncbiprotein

position:637184:1
position: 637184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:653185:1
position: 653185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:637184-637253:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:637636-637800:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:638151-638314:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:638407-638508:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:638706-638801:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:638881-638976:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:640581-640719:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:642883-643103:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:644885-645005:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:646946-647205:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:647634-647999:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:648449-648576:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:649706-649913:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:651120-651348:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:651844-651977:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:653093-653185:1:exon

UBE2V2
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: UBE2V2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 683783..730486
location: region:683783-730486:1
so has part: feature:683783-730486:1:exon
subclass of: SO_0000010

115279308
type: Gene
SIO_000068: ncbigene

position:683783:1
position: 683783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:730486:1
position: 730486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:683783-730486:1:exon

UBE2V2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: UBE2V2
product: ubiquitin conjugating enzyme E2 V2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_029923865.1
SIO_010081: UBE2V2
subclass of: SO_0000673
so part of: UBE2V2
location: join(683783..683857,709599..709747,714399..714524,730295..730486)
location: region:683783-730486:1
so has part: feature:683783-683857:1:exon
so has part: feature:709599-709747:1:exon
so has part: feature:714399-714524:1:exon
so has part: feature:730295-730486:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:683783-683857:1:exon

position:683857:1
position: 683857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:709599-709747:1:exon

position:709599:1
position: 709599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:709747:1
position: 709747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:714399-714524:1:exon

position:714399:1
position: 714399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:714524:1
position: 714524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:730295-730486:1:exon

position:730295:1
position: 730295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UBE2V2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: UBE2V2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 variant 2
translation: MAVSTGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPSVRFVTKINMNGINNSSGMVDARSIPVLAKWQNSYSIKVVLQELRRLMMSKENVKLPQPPEGQTYNN
SIO_010081: UBE2V2
subclass of: SO_0000673
so part of: UBE2V2
location: join(683842..683857,709599..709747,714399..714524,730295..730441)
location: region:683842-730441:1
so has part: feature:683842-683857:1:exon
so has part: feature:709599-709747:1:exon
so has part: feature:714399-714524:1:exon
so has part: feature:730295-730441:1:exon

XP_029779725.1
type: Protein
SIO_000068: ncbiprotein

position:683842:1
position: 683842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:730441:1
position: 730441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:683842-683857:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:709599-709747:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:714399-714524:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:730295-730441:1:exon

LOC115279435
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115279435
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 749274..749661
location: region:749274-749661:1
so has part: feature:749274-749661:1:exon

115279435
type: Gene
SIO_000068: ncbigene

position:749274:1
position: 749274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:749661:1
position: 749661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:749274-749661:1:exon

LOC115279435
type: Exon
subclass of: SO_0000147
RO_0002162: 37032
gene: LOC115279435
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC115279435
subclass of: SO_0000673
so part of: LOC115279435
location: 749274..749661
location: region:749274-749661:1
so has part: feature:749274-749661:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:749274-749661:1:exon

LOC115279436
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115279436
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(927148..941250)
location: region:927148-941250:-1
so has part: feature:927148-941250:-1:exon

115279436
type: Gene
SIO_000068: ncbigene

position:927148:-1
position: 927148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:941250:-1
position: 941250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:927148-941250:-1:exon

LOC115279436
type: Exon
subclass of: SO_0000147
RO_0002162: 37032
gene: LOC115279436
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 5% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC115279436
subclass of: SO_0000673
so part of: LOC115279436
location: complement(927148..927217)
location: region:927148-927217:-1
so has part: feature:927148-927217:-1:exon

position:927217:-1
position: 927217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:927148-927217:-1:exon

LOC115279436
type: Exon
subclass of: SO_0000147
RO_0002162: 37032
gene: LOC115279436
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 5% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC115279436
subclass of: SO_0000673
so part of: LOC115279436
location: complement(927761..928031)
location: region:927761-928031:-1
so has part: feature:927761-928031:-1:exon

position:927761:-1
position: 927761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:928031:-1
position: 928031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:927761-928031:-1:exon

LOC115279436
type: Exon
subclass of: SO_0000147
RO_0002162: 37032
gene: LOC115279436
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 5% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC115279436
subclass of: SO_0000673
so part of: LOC115279436
location: complement(938480..939310)
location: region:938480-939310:-1
so has part: feature:938480-939310:-1:exon

position:938480:-1
position: 938480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:939310:-1
position: 939310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:938480-939310:-1:exon

LOC115279436
type: Exon
subclass of: SO_0000147
RO_0002162: 37032
gene: LOC115279436
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 5% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC115279436
subclass of: SO_0000673
so part of: LOC115279436
location: complement(940682..941250)
location: region:940682-941250:-1
so has part: feature:940682-941250:-1:exon

position:940682:-1
position: 940682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:940682-941250:-1:exon

LOC115279483
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115279483
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(942361..951007)
location: region:942361-951007:-1
so has part: feature:942361-951007:-1:exon
subclass of: SO_0000011

115279483
type: Gene
SIO_000068: ncbigene

position:942361:-1
position: 942361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:951007:-1
position: 951007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:942361-951007:-1:exon

LOC115279483
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115279483
product: uncharacterized LOC115279483
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003903462.1
SIO_010081: LOC115279483
subclass of: SO_0000673
so part of: LOC115279483
location: complement(join(942361..942407,946610..946780,950827..951007))
location: region:942361-951007:-1
so has part: feature:950827-951007:-1:exon
so has part: feature:946610-946780:-1:exon
so has part: feature:942361-942407:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:950827-951007:-1:exon

position:950827:-1
position: 950827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:946610-946780:-1:exon

position:946610:-1
position: 946610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:946780:-1
position: 946780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:942361-942407:-1:exon

position:942407:-1
position: 942407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EFCAB1
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: EFCAB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1330160..1345436)
location: region:1330160-1345436:-1
so has part: feature:1330160-1345436:-1:exon
subclass of: SO_0000010

115279053
type: Gene
SIO_000068: ncbigene

position:1330160:-1
position: 1330160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1345436:-1
position: 1345436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1330160-1345436:-1:exon

EFCAB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: EFCAB1
product: EF-hand calcium binding domain 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_029923576.1
SIO_010081: EFCAB1
subclass of: SO_0000673
so part of: EFCAB1
location: complement(join(1330160..1330459,1335214..1335299,1338425..1338529,1338812..1338963,1339609..1339713,1340430..1340588,1345297..1345436))
location: region:1330160-1345436:-1
so has part: feature:1345297-1345436:-1:exon
so has part: feature:1340430-1340588:-1:exon
so has part: feature:1339609-1339713:-1:exon
so has part: feature:1338812-1338963:-1:exon
so has part: feature:1338425-1338529:-1:exon
so has part: feature:1335214-1335299:-1:exon
so has part: feature:1330160-1330459:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1345297-1345436:-1:exon

position:1345297:-1
position: 1345297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1340430-1340588:-1:exon

position:1340430:-1
position: 1340430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1340588:-1
position: 1340588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1339609-1339713:-1:exon

position:1339609:-1
position: 1339609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1339713:-1
position: 1339713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1338812-1338963:-1:exon

position:1338812:-1
position: 1338812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1338963:-1
position: 1338963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1338425-1338529:-1:exon

position:1338425:-1
position: 1338425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1338529:-1
position: 1338529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1335214-1335299:-1:exon

position:1335214:-1
position: 1335214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1335299:-1
position: 1335299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1330160-1330459:-1:exon

position:1330459:-1
position: 1330459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EFCAB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: EFCAB1
product: EF-hand calcium binding domain 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_029923575.1
SIO_010081: EFCAB1
subclass of: SO_0000673
so part of: EFCAB1
location: complement(join(1331735..1332208,1335214..1335299,1338425..1338529,1338812..1338963,1339609..1339713,1340430..1340588,1345297..1345436))
location: region:1331735-1345436:-1
so has part: feature:1345297-1345436:-1:exon
so has part: feature:1340430-1340588:-1:exon
so has part: feature:1339609-1339713:-1:exon
so has part: feature:1338812-1338963:-1:exon
so has part: feature:1338425-1338529:-1:exon
so has part: feature:1335214-1335299:-1:exon
so has part: feature:1331735-1332208:-1:exon

position:1331735:-1
position: 1331735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1345297-1345436:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1340430-1340588:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1339609-1339713:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1338812-1338963:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1338425-1338529:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1335214-1335299:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1331735-1332208:-1:exon

position:1332208:-1
position: 1332208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EFCAB1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 37032
gene: EFCAB1
product: EF-hand calcium binding domain 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003903174.1
SIO_010081: EFCAB1
so part of: EFCAB1
location: complement(join(1331735..1332208,1332332..1332429,1335214..1335299,1338425..1338529,1338812..1338963,1339609..1339713,1340430..1340588,1345297..1345436))
location: region:1331735-1345436:-1
so has part: feature:1345297-1345436:-1:exon
so has part: feature:1340430-1340588:-1:exon
so has part: feature:1339609-1339713:-1:exon
so has part: feature:1338812-1338963:-1:exon
so has part: feature:1338425-1338529:-1:exon
so has part: feature:1335214-1335299:-1:exon
so has part: feature:1332332-1332429:-1:exon
so has part: feature:1331735-1332208:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1345297-1345436:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1340430-1340588:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1339609-1339713:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1338812-1338963:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1338425-1338529:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1335214-1335299:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1332332-1332429:-1:exon

position:1332332:-1
position: 1332332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1332429:-1
position: 1332429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1331735-1332208:-1:exon

EFCAB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: EFCAB1
product: EF-hand calcium binding domain 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_029923574.1
SIO_010081: EFCAB1
subclass of: SO_0000673
so part of: EFCAB1
location: complement(join(1335191..1335299,1338425..1338529,1338812..1338963,1339609..1339713,1340430..1340588,1345297..1345436))
location: region:1335191-1345436:-1
so has part: feature:1345297-1345436:-1:exon
so has part: feature:1340430-1340588:-1:exon
so has part: feature:1339609-1339713:-1:exon
so has part: feature:1338812-1338963:-1:exon
so has part: feature:1338425-1338529:-1:exon
so has part: feature:1335191-1335299:-1:exon

position:1335191:-1
position: 1335191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1345297-1345436:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1340430-1340588:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1339609-1339713:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1338812-1338963:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1338425-1338529:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1335191-1335299:-1:exon

EFCAB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: EFCAB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EF-hand calcium-binding domain-containing protein 1
translation: MSRKKLQKLTDTLTKNCKHFNTFEVECLINLFYKLVGDVTERQGMVIGIDRNTFRNILHMTFGMTDDMIMDRVFRGFDKDNDGCINVSEWIYGLSVFLRGTLEEKMKYCFEVFDLNGDGFISKDEMFHMLKNSLLKQPSEEDPDEGIKDLVEITLKKMDHDHDGKLSFSDYEQSVREETLLLEAFGPCLPDPKSQMEFEAHVFKDTDEFNDI
SIO_010081: EFCAB1
subclass of: SO_0000673
so part of: EFCAB1
location: complement(join(1335240..1335299,1338425..1338529,1338812..1338963,1339609..1339713,1340430..1340588,1345297..1345354))
location: region:1335240-1345354:-1
so has part: feature:1345297-1345354:-1:exon
so has part: feature:1340430-1340588:-1:exon
so has part: feature:1339609-1339713:-1:exon
so has part: feature:1338812-1338963:-1:exon
so has part: feature:1338425-1338529:-1:exon
so has part: feature:1335240-1335299:-1:exon

XP_029779434.1
type: Protein
SIO_000068: ncbiprotein

position:1335240:-1
position: 1335240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1345354:-1
position: 1345354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1345297-1345354:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1340430-1340588:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1339609-1339713:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1338812-1338963:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1338425-1338529:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1335240-1335299:-1:exon

EFCAB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: EFCAB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EF-hand calcium-binding domain-containing protein 1
translation: MSRKKLQKLTDTLTKNCKHFNTFEVECLINLFYKLVGDVTERQGMVIGIDRNTFRNILHMTFGMTDDMIMDRVFRGFDKDNDGCINVSEWIYGLSVFLRGTLEEKMKYCFEVFDLNGDGFISKDEMFHMLKNSLLKQPSEEDPDEGIKDLVEITLKKMDHDHDGKLSFSDYEQSVREETLLLEAFGPCLPDPKSQMEFEAHVFKDTDEFNDI
SIO_010081: EFCAB1
subclass of: SO_0000673
so part of: EFCAB1
location: complement(join(1335240..1335299,1338425..1338529,1338812..1338963,1339609..1339713,1340430..1340588,1345297..1345354))
location: region:1335240-1345354:-1
so has part: feature:1345297-1345354:-1:exon
so has part: feature:1340430-1340588:-1:exon
so has part: feature:1339609-1339713:-1:exon
so has part: feature:1338812-1338963:-1:exon
so has part: feature:1338425-1338529:-1:exon
so has part: feature:1335240-1335299:-1:exon

XP_029779435.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1345297-1345354:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1340430-1340588:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1339609-1339713:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1338812-1338963:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1338425-1338529:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1335240-1335299:-1:exon

EFCAB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: EFCAB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EF-hand calcium-binding domain-containing protein 1
translation: MSRKKLQKLTDTLTKNCKHFNTFEVECLINLFYKLVGDVTERQGMVIGIDRNTFRNILHMTFGMTDDMIMDRVFRGFDKDNDGCINVSEWIYGLSVFLRGTLEEKMKYCFEVFDLNGDGFISKDEMFHMLKNSLLKQPSEEDPDEGIKDLVEITLKKMDHDHDGKLSFSDYEQSVREETLLLEAFGPCLPDPKSQMEFEAHVFKDTDEFNDI
SIO_010081: EFCAB1
subclass of: SO_0000673
so part of: EFCAB1
location: complement(join(1335240..1335299,1338425..1338529,1338812..1338963,1339609..1339713,1340430..1340588,1345297..1345354))
location: region:1335240-1345354:-1
so has part: feature:1345297-1345354:-1:exon
so has part: feature:1340430-1340588:-1:exon
so has part: feature:1339609-1339713:-1:exon
so has part: feature:1338812-1338963:-1:exon
so has part: feature:1338425-1338529:-1:exon
so has part: feature:1335240-1335299:-1:exon

XP_029779436.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1345297-1345354:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1340430-1340588:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1339609-1339713:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1338812-1338963:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1338425-1338529:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1335240-1335299:-1:exon

LOC115279212
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115279212
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1388946..1391104
location: region:1388946-1391104:1
so has part: feature:1388946-1391104:1:exon
subclass of: SO_0000011

115279212
type: Gene
SIO_000068: ncbigene

position:1388946:1
position: 1388946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1391104:1
position: 1391104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1388946-1391104:1:exon

LOC115279212
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115279212
product: uncharacterized LOC115279212
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_003903286.1
SIO_010081: LOC115279212
subclass of: SO_0000673
so part of: LOC115279212
location: join(1388946..1389195,1390830..1391104)
location: region:1388946-1391104:1
so has part: feature:1388946-1389195:1:exon
so has part: feature:1390830-1391104:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1388946-1389195:1:exon

position:1389195:1
position: 1389195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1390830-1391104:1:exon

position:1390830:1
position: 1390830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115279437
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115279437
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1523500..1541134)
location: region:1523500-1541134:-1
so has part: feature:1523500-1541134:-1:exon

115279437
type: Gene
SIO_000068: ncbigene

position:1523500:-1
position: 1523500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1541134:-1
position: 1541134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1523500-1541134:-1:exon

LOC115279437
type: Exon
subclass of: SO_0000147
RO_0002162: 37032
gene: LOC115279437
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC115279437
subclass of: SO_0000673
so part of: LOC115279437
location: complement(1523500..1523676)
location: region:1523500-1523676:-1
so has part: feature:1523500-1523676:-1:exon

position:1523676:-1
position: 1523676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1523500-1523676:-1:exon

LOC115279437
type: Exon
subclass of: SO_0000147
RO_0002162: 37032
gene: LOC115279437
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC115279437
subclass of: SO_0000673
so part of: LOC115279437
location: complement(1523953..1524154)
location: region:1523953-1524154:-1
so has part: feature:1523953-1524154:-1:exon

position:1523953:-1
position: 1523953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1524154:-1
position: 1524154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1523953-1524154:-1:exon

LOC115279437
type: Exon
subclass of: SO_0000147
RO_0002162: 37032
gene: LOC115279437
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC115279437
subclass of: SO_0000673
so part of: LOC115279437
location: complement(1525945..1526871)
location: region:1525945-1526871:-1
so has part: feature:1525945-1526871:-1:exon

position:1525945:-1
position: 1525945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1526871:-1
position: 1526871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1525945-1526871:-1:exon

LOC115279437
type: Exon
subclass of: SO_0000147
RO_0002162: 37032
gene: LOC115279437
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC115279437
subclass of: SO_0000673
so part of: LOC115279437
location: complement(1538384..1538600)
location: region:1538384-1538600:-1
so has part: feature:1538384-1538600:-1:exon

position:1538384:-1
position: 1538384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1538600:-1
position: 1538600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1538384-1538600:-1:exon

LOC115279437
type: Exon
subclass of: SO_0000147
RO_0002162: 37032
gene: LOC115279437
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC115279437
subclass of: SO_0000673
so part of: LOC115279437
location: complement(1541071..1541134)
location: region:1541071-1541134:-1
so has part: feature:1541071-1541134:-1:exon

position:1541071:-1
position: 1541071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1541071-1541134:-1:exon

SNAI2
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: SNAI2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1545916..1548821)
location: region:1545916-1548821:-1
so has part: feature:1545916-1548821:-1:exon
subclass of: SO_0000010

115279438
type: Gene
SIO_000068: ncbigene

position:1545916:-1
position: 1545916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1548821:-1
position: 1548821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1545916-1548821:-1:exon

SNAI2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: SNAI2
product: snail family transcriptional repressor 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029923997.1
SIO_010081: SNAI2
subclass of: SO_0000673
so part of: SNAI2
location: complement(join(1545916..1546168,1547050..1547595,1547794..1548135,1548803..1548821))
location: region:1545916-1548821:-1
so has part: feature:1548803-1548821:-1:exon
so has part: feature:1547794-1548135:-1:exon
so has part: feature:1547050-1547595:-1:exon
so has part: feature:1545916-1546168:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1548803-1548821:-1:exon

position:1548803:-1
position: 1548803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1547794-1548135:-1:exon

position:1547794:-1
position: 1547794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1548135:-1
position: 1548135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1547050-1547595:-1:exon

position:1547050:-1
position: 1547050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1547595:-1
position: 1547595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1545916-1546168:-1:exon

position:1546168:-1
position: 1546168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SNAI2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: SNAI2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein SNAI2
translation: MNSDENSVNSKRVEVPRDKDASLGRRDRLANAGAACTAGCVREPGVRSPDRFPSSGRRRRADPSTQGTPSACTEWGTTSLYLGSGIDASPPRWRPGGPSVGRTSRLLGARGPLSPRVCRRLIISPYLYESYPMPVIPQPEILSSGAYSPMTVWTTAAPFHSPLPSGLSPLSGYPSSLGRVSPPPPSDTSSKDHSGSESPISDEEERLQSKLADPHAIEAEKFQCNLCNKTYSTFSGLAKHKQLHCDAQSRKSFSCKYCDKEYVSLGALKMHIRTHTLPCVCKICGKAFSRPWLLQGHIRTHTGEKPFSCPHCNRAFADRSNLRAHLQTHSDVKKYQCKACSKTFSRMSLLHKHEESGCCVAH
SIO_010081: SNAI2
subclass of: SO_0000673
so part of: SNAI2
location: complement(join(1545987..1546168,1547050..1547595,1547794..1548135,1548803..1548821))
location: region:1545987-1548821:-1
so has part: feature:1548803-1548821:-1:exon
so has part: feature:1547794-1548135:-1:exon
so has part: feature:1547050-1547595:-1:exon
so has part: feature:1545987-1546168:-1:exon

XP_029779857.1
type: Protein
SIO_000068: ncbiprotein

position:1545987:-1
position: 1545987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1548803-1548821:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1547794-1548135:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1547050-1547595:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1545987-1546168:-1:exon

PPDPFL
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: PPDPFL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1681153..1685822
location: region:1681153-1685822:1
so has part: feature:1681153-1685822:1:exon
subclass of: SO_0000010

115279328
type: Gene
SIO_000068: ncbigene

position:1681153:1
position: 1681153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1685822:1
position: 1685822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1681153-1685822:1:exon

PPDPFL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: PPDPFL
product: pancreatic progenitor cell differentiation and proliferation factor like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029923885.1
SIO_010081: PPDPFL
subclass of: SO_0000673
so part of: PPDPFL
location: join(1681153..1681364,1681703..1681765,1683475..1683552,1683655..1683750,1685246..1685822)
location: region:1681153-1685822:1
so has part: feature:1681153-1681364:1:exon
so has part: feature:1681703-1681765:1:exon
so has part: feature:1683475-1683552:1:exon
so has part: feature:1683655-1683750:1:exon
so has part: feature:1685246-1685822:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1681153-1681364:1:exon

position:1681364:1
position: 1681364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1681703-1681765:1:exon

position:1681703:1
position: 1681703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1681765:1
position: 1681765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1683475-1683552:1:exon

position:1683475:1
position: 1683475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1683552:1
position: 1683552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1683655-1683750:1:exon

position:1683655:1
position: 1683655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1683750:1
position: 1683750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1685246-1685822:1:exon

position:1685246:1
position: 1685246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPDPFL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: PPDPFL
product: pancreatic progenitor cell differentiation and proliferation factor like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029923887.1
SIO_010081: PPDPFL
subclass of: SO_0000673
so part of: PPDPFL
location: join(1681153..1681364,1681703..1681765,1683475..1683552,1683655..1683750,1684092..1684176)
location: region:1681153-1684176:1
so has part: feature:1681153-1681364:1:exon
so has part: feature:1681703-1681765:1:exon
so has part: feature:1683475-1683552:1:exon
so has part: feature:1683655-1683750:1:exon
so has part: feature:1684092-1684176:1:exon

position:1684176:1
position: 1684176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1681153-1681364:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1681703-1681765:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1683475-1683552:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1683655-1683750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1684092-1684176:1:exon

position:1684092:1
position: 1684092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPDPFL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: PPDPFL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pancreatic progenitor cell differentiation and proliferation factor-like protein isoform X1
translation: MASVPSIGCLLAKNQYYRKASISSVSSLTGSDSVSVVPDDKSQQGLPKEEESDWWFKSFFHSEPVFSDVRRKDLSAIDSDNQEDSTC
SIO_010081: PPDPFL
subclass of: SO_0000673
so part of: PPDPFL
location: join(1681711..1681765,1683475..1683552,1683655..1683750,1685246..1685280)
location: region:1681711-1685280:1
so has part: feature:1681711-1681765:1:exon
so has part: feature:1683475-1683552:1:exon
so has part: feature:1683655-1683750:1:exon
so has part: feature:1685246-1685280:1:exon

XP_029779745.1
type: Protein
SIO_000068: ncbiprotein

position:1681711:1
position: 1681711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1685280:1
position: 1685280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1681711-1681765:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1683475-1683552:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1683655-1683750:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1685246-1685280:1:exon

PPDPFL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: PPDPFL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pancreatic progenitor cell differentiation and proliferation factor-like protein isoform X2
translation: MASVPSIGCLLAKNQYYRKASISSVSSLTGSDSVSVVPDDKSQQGLPKEEESDWWFKSFFHSEPVFSDVRRKDLSARNK
SIO_010081: PPDPFL
subclass of: SO_0000673
so part of: PPDPFL
location: join(1681711..1681765,1683475..1683552,1683655..1683750,1684092..1684102)
location: region:1681711-1684102:1
so has part: feature:1681711-1681765:1:exon
so has part: feature:1683475-1683552:1:exon
so has part: feature:1683655-1683750:1:exon
so has part: feature:1684092-1684102:1:exon

XP_029779747.1
type: Protein
SIO_000068: ncbiprotein

position:1684102:1
position: 1684102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1681711-1681765:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1683475-1683552:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1683655-1683750:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1684092-1684102:1:exon

LOC115279441
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115279441
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1797653..1825905
location: region:1797653-1825905:1
so has part: feature:1797653-1825905:1:exon
subclass of: SO_0000010

115279441
type: Gene
SIO_000068: ncbigene

position:1797653:1
position: 1797653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1825905:1
position: 1825905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1797653-1825905:1:exon

LOC115279441
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: LOC115279441
product: tigger transposable element-derived protein 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029923999.1
SIO_010081: LOC115279441
subclass of: SO_0000673
so part of: LOC115279441
location: join(1797653..1797896,1802192..1802378,1825379..1825905)
location: region:1797653-1825905:1
so has part: feature:1797653-1797896:1:exon
so has part: feature:1802192-1802378:1:exon
so has part: feature:1825379-1825905:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1797653-1797896:1:exon

position:1797896:1
position: 1797896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1802192-1802378:1:exon

position:1802192:1
position: 1802192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1802378:1
position: 1802378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1825379-1825905:1:exon

position:1825379:1
position: 1825379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115279441
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: LOC115279441
product: tigger transposable element-derived protein 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029923998.1
SIO_010081: LOC115279441
subclass of: SO_0000673
so part of: LOC115279441
location: join(1797653..1797896,1825379..1825905)
location: region:1797653-1825905:1
so has part: feature:1797653-1797896:1:exon
so has part: feature:1825379-1825905:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1797653-1797896:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1825379-1825905:1:exon

LOC115279441
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 37032
gene: LOC115279441
product: tigger transposable element-derived protein 1-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003903442.1
SIO_010081: LOC115279441
so part of: LOC115279441
location: join(1797653..1797896,1802192..1802378,1817703..1817779)
location: region:1797653-1817779:1
so has part: feature:1797653-1797896:1:exon
so has part: feature:1802192-1802378:1:exon
so has part: feature:1817703-1817779:1:exon

position:1817779:1
position: 1817779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1797653-1797896:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1802192-1802378:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1817703-1817779:1:exon

position:1817703:1
position: 1817703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115279441
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 37032
gene: LOC115279441
product: tigger transposable element-derived protein 1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003903441.1
SIO_010081: LOC115279441
so part of: LOC115279441
location: join(1797653..1797896,1799410..1799716)
location: region:1797653-1799716:1
so has part: feature:1797653-1797896:1:exon
so has part: feature:1799410-1799716:1:exon

position:1799716:1
position: 1799716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1797653-1797896:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1799410-1799716:1:exon

position:1799410:1
position: 1799410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115279441
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: LOC115279441
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tigger transposable element-derived protein 1-like isoform X1
translation: MLFLYEVTYHFKHSTASTERFCFKETGLSQIRWSFLSSMADMEEVARGLEVEVEPEAGTEWQQSHDQTFSDEELLLTDAQGDQLPNMESPPGEDAVRTVEVTAEDSQCFMNLVVKAAAGFERIVPNFERRSTVHKMLSNSISCYRDIICERKSQLMRQILLSYFKKLQPHQASATTTFISQQRSTVRQDPSPEKKIMTC
SIO_010081: LOC115279441
subclass of: SO_0000673
so part of: LOC115279441
location: join(1797776..1797896,1825379..1825857)
location: region:1797776-1825857:1
so has part: feature:1797776-1797896:1:exon
so has part: feature:1825379-1825857:1:exon

XP_029779858.1
type: Protein
SIO_000068: ncbiprotein

position:1797776:1
position: 1797776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1825857:1
position: 1825857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1797776-1797896:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1825379-1825857:1:exon

LOC115279441
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: LOC115279441
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tigger transposable element-derived protein 1-like isoform X2
translation: MLYRSLILPQLPPHCIYDMEEVARGLEVEVEPEAGTEWQQSHDQTFSDEELLLTDAQGDQLPNMESPPGEDAVRTVEVTAEDSQCFMNLVVKAAAGFERIVPNFERRSTVHKMLSNSISCYRDIICERKSQLMRQILLSYFKKLQPHQASATTTFISQQRSTVRQDPSPEKKIMTC
SIO_010081: LOC115279441
subclass of: SO_0000673
so part of: LOC115279441
location: join(1802327..1802378,1825379..1825857)
location: region:1802327-1825857:1
so has part: feature:1802327-1802378:1:exon
so has part: feature:1825379-1825857:1:exon

XP_029779859.1
type: Protein
SIO_000068: ncbiprotein

position:1802327:1
position: 1802327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1802327-1802378:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1825379-1825857:1:exon

LOC115279442
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115279442
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2031468..2081111
location: region:2031468-2081111:1
so has part: feature:2031468-2081111:1:exon

115279442
type: Gene
SIO_000068: ncbigene

position:2031468:1
position: 2031468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2081111:1
position: 2081111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2031468-2081111:1:exon

LOC115279442
type: Exon
subclass of: SO_0000147
RO_0002162: 37032
gene: LOC115279442
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC115279442
subclass of: SO_0000673
so part of: LOC115279442
location: 2031468..2031473
location: region:2031468-2031473:1
so has part: feature:2031468-2031473:1:exon

position:2031473:1
position: 2031473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2031468-2031473:1:exon

LOC115279442
type: Exon
subclass of: SO_0000147
RO_0002162: 37032
gene: LOC115279442
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC115279442
subclass of: SO_0000673
so part of: LOC115279442
location: 2034611..2034715
location: region:2034611-2034715:1
so has part: feature:2034611-2034715:1:exon

position:2034611:1
position: 2034611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2034715:1
position: 2034715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2034611-2034715:1:exon

LOC115279442
type: Exon
subclass of: SO_0000147
RO_0002162: 37032
gene: LOC115279442
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC115279442
subclass of: SO_0000673
so part of: LOC115279442
location: 2037197..2037323
location: region:2037197-2037323:1
so has part: feature:2037197-2037323:1:exon

position:2037197:1
position: 2037197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2037323:1
position: 2037323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2037197-2037323:1:exon

LOC115279442
type: Exon
subclass of: SO_0000147
RO_0002162: 37032
gene: LOC115279442
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC115279442
subclass of: SO_0000673
so part of: LOC115279442
location: 2061484..2063037
location: region:2061484-2063037:1
so has part: feature:2061484-2063037:1:exon

position:2061484:1
position: 2061484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2063037:1
position: 2063037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2061484-2063037:1:exon

LOC115279442
type: Exon
subclass of: SO_0000147
RO_0002162: 37032
gene: LOC115279442
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC115279442
subclass of: SO_0000673
so part of: LOC115279442
location: 2080950..2081111
location: region:2080950-2081111:1
so has part: feature:2080950-2081111:1:exon

position:2080950:1
position: 2080950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2080950-2081111:1:exon

SNTG1
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: SNTG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2625712..3228405
location: region:2625712-3228405:1
so has part: feature:2625712-3228405:1:exon
subclass of: SO_0000010

115279444
type: Gene
SIO_000068: ncbigene

position:2625712:1
position: 2625712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3228405:1
position: 3228405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2625712-3228405:1:exon

SNTG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: SNTG1
product: syntrophin gamma 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029924001.1
SIO_010081: SNTG1
subclass of: SO_0000673
so part of: SNTG1
location: join(2625712..2625898,2674939..2675013,2904348..2904401,2911551..2911685,2962869..2962925,2972754..2972811,2973605..2973648,2973741..2973782,3021717..3021819,3024877..3024959,3034378..3034508,3051503..3051632,3076319..3076357,3142226..3142342,3147144..3147288,3157651..3157795,3169849..3170137,3173943..3174035,3200637..3200747,3227936..3228405)
location: region:2625712-3228405:1
so has part: feature:2625712-2625898:1:exon
so has part: feature:2674939-2675013:1:exon
so has part: feature:2904348-2904401:1:exon
so has part: feature:2911551-2911685:1:exon
so has part: feature:2962869-2962925:1:exon
so has part: feature:2972754-2972811:1:exon
so has part: feature:2973605-2973648:1:exon
so has part: feature:2973741-2973782:1:exon
so has part: feature:3021717-3021819:1:exon
so has part: feature:3024877-3024959:1:exon
so has part: feature:3034378-3034508:1:exon
so has part: feature:3051503-3051632:1:exon
so has part: feature:3076319-3076357:1:exon
so has part: feature:3142226-3142342:1:exon
so has part: feature:3147144-3147288:1:exon
so has part: feature:3157651-3157795:1:exon
so has part: feature:3169849-3170137:1:exon
so has part: feature:3173943-3174035:1:exon
so has part: feature:3200637-3200747:1:exon
so has part: feature:3227936-3228405:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2625712-2625898:1:exon

position:2625898:1
position: 2625898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2674939-2675013:1:exon

position:2674939:1
position: 2674939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2675013:1
position: 2675013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2904348-2904401:1:exon

position:2904348:1
position: 2904348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2904401:1
position: 2904401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2911551-2911685:1:exon

position:2911551:1
position: 2911551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2911685:1
position: 2911685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2962869-2962925:1:exon

position:2962869:1
position: 2962869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2962925:1
position: 2962925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2972754-2972811:1:exon

position:2972754:1
position: 2972754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2972811:1
position: 2972811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2973605-2973648:1:exon

position:2973605:1
position: 2973605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2973648:1
position: 2973648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2973741-2973782:1:exon

position:2973741:1
position: 2973741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2973782:1
position: 2973782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3021717-3021819:1:exon

position:3021717:1
position: 3021717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3021819:1
position: 3021819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3024877-3024959:1:exon

position:3024877:1
position: 3024877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3024959:1
position: 3024959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3034378-3034508:1:exon

position:3034378:1
position: 3034378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3034508:1
position: 3034508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3051503-3051632:1:exon

position:3051503:1
position: 3051503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3051632:1
position: 3051632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3076319-3076357:1:exon

position:3076319:1
position: 3076319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3076357:1
position: 3076357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3142226-3142342:1:exon

position:3142226:1
position: 3142226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3142342:1
position: 3142342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3147144-3147288:1:exon

position:3147144:1
position: 3147144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3147288:1
position: 3147288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3157651-3157795:1:exon

position:3157651:1
position: 3157651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3157795:1
position: 3157795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3169849-3170137:1:exon

position:3169849:1
position: 3169849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3170137:1
position: 3170137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3173943-3174035:1:exon

position:3173943:1
position: 3173943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3174035:1
position: 3174035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3200637-3200747:1:exon

position:3200637:1
position: 3200637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3200747:1
position: 3200747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3227936-3228405:1:exon

position:3227936:1
position: 3227936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SNTG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: SNTG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-1-syntrophin
translation: MDFRAACEETKTGICLLQDGNQEPFKVRLHLAKDILMIQEQDVICVSGEPFYSGERTVTIRRQTVGGFGLSIKGGAEHNIPVVISKISKEQRAELSGLLFIGDAILQINGINVRKCKHEEVVQVLRNAGEEVTLTVSFLKRAPAFLKLPLNEDCACAPSDQSSGTSSPLCDSGLHLNYHPNNTDTLSCSSWPTSPGLRWEKRWCDLRLIPLLHSRFSQYVPGTDVSRQNAFQVIAVDGVCSGIIQCLSAEDCIDWLQAIATNISNLTKHNIKKINRNFPVNQQIVYMGWCEAREQDPLQDRAYSPTFLALRGSCLYKFLAPPSVSFASAHWQACPGYGSAHLCPGQLLRCRSPLQPAQRGPGHFYPDDLQDEALLLMDEQRKWFLEMESSSGEVAVKTVEMTSEDLQYYVNLIDKVAAEYSSILKQNPHDHAIHHALVSSDSRDGHVSKTDSCMPACVTPGFHQDSDLLDRRKHCFTVQSESGEDLYFSVELDSDLAQWERAFQTATFLEVERIQCKTYACVLESHLMGLTIDFSTGFICFDAATKAVLWRFKFSQLKGSSDDGKSKIKFLFQNPDTKQIEAKELEFSNLFAVLHCIHSFFAAKVACLDPLFLGNQATTSAAPSSAATSKAKYTT
SIO_010081: SNTG1
subclass of: SO_0000673
so part of: SNTG1
location: join(2904375..2904401,2911551..2911685,2962869..2962925,2972754..2972811,2973605..2973648,2973741..2973782,3021717..3021819,3024877..3024959,3034378..3034508,3051503..3051632,3076319..3076357,3142226..3142342,3147144..3147288,3157651..3157795,3169849..3170137,3173943..3174035,3200637..3200747,3227936..3228094)
location: region:2904375-3228094:1
so has part: feature:2904375-2904401:1:exon
so has part: feature:2911551-2911685:1:exon
so has part: feature:2962869-2962925:1:exon
so has part: feature:2972754-2972811:1:exon
so has part: feature:2973605-2973648:1:exon
so has part: feature:2973741-2973782:1:exon
so has part: feature:3021717-3021819:1:exon
so has part: feature:3024877-3024959:1:exon
so has part: feature:3034378-3034508:1:exon
so has part: feature:3051503-3051632:1:exon
so has part: feature:3076319-3076357:1:exon
so has part: feature:3142226-3142342:1:exon
so has part: feature:3147144-3147288:1:exon
so has part: feature:3157651-3157795:1:exon
so has part: feature:3169849-3170137:1:exon
so has part: feature:3173943-3174035:1:exon
so has part: feature:3200637-3200747:1:exon
so has part: feature:3227936-3228094:1:exon

XP_029779861.1
type: Protein
SIO_000068: ncbiprotein

position:2904375:1
position: 2904375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3228094:1
position: 3228094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2904375-2904401:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2911551-2911685:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2962869-2962925:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2972754-2972811:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2973605-2973648:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2973741-2973782:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3021717-3021819:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3024877-3024959:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3034378-3034508:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3051503-3051632:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3076319-3076357:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3142226-3142342:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3147144-3147288:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3157651-3157795:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3169849-3170137:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3173943-3174035:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3200637-3200747:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3227936-3228094:1:exon

LOC115279539
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115279539
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 3432433..3432538
location: region:3432433-3432538:1
so has part: feature:3432433-3432538:1:exon
subclass of: SO_0000623

115279539
type: Gene
SIO_000068: ncbigene

position:3432433:1
position: 3432433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3432538:1
position: 3432538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3432433-3432538:1:exon

LOC115279539
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: snRNA
gene: LOC115279539
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003903499.1
SIO_010081: LOC115279539
subclass of: SO_0000673
so part of: LOC115279539
location: 3432433..3432538
location: region:3432433-3432538:1
so has part: feature:3432433-3432538:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3432433-3432538:1:exon

PXDNL
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: PXDNL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3679545..3813719)
location: region:3679545-3813719:-1
so has part: feature:3679545-3813719:-1:exon
subclass of: SO_0000010

115279446
type: Gene
SIO_000068: ncbigene

position:3679545:-1
position: 3679545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3813719:-1
position: 3813719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3679545-3813719:-1:exon

PXDNL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: PXDNL
product: peroxidasin like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029924002.1
SIO_010081: PXDNL
subclass of: SO_0000673
so part of: PXDNL
location: complement(join(3679545..3679855,3680598..3680711,3694245..3694374,3700132..3700246,3718644..3718852,3721433..3721567,3748538..3749250,3749382..3749560,3751393..3751550,3753036..3753144,3761445..3761588,3762169..3762325,3764880..3764992,3778192..3778350,3780090..3780206,3784396..3784662,3788659..3788825,3795364..3795481,3797797..3797966,3803594..3803665,3808542..3808613,3813694..3813719))
location: region:3679545-3813719:-1
so has part: feature:3813694-3813719:-1:exon
so has part: feature:3808542-3808613:-1:exon
so has part: feature:3803594-3803665:-1:exon
so has part: feature:3797797-3797966:-1:exon
so has part: feature:3795364-3795481:-1:exon
so has part: feature:3788659-3788825:-1:exon
so has part: feature:3784396-3784662:-1:exon
so has part: feature:3780090-3780206:-1:exon
so has part: feature:3778192-3778350:-1:exon
so has part: feature:3764880-3764992:-1:exon
so has part: feature:3762169-3762325:-1:exon
so has part: feature:3761445-3761588:-1:exon
so has part: feature:3753036-3753144:-1:exon
so has part: feature:3751393-3751550:-1:exon
so has part: feature:3749382-3749560:-1:exon
so has part: feature:3748538-3749250:-1:exon
so has part: feature:3721433-3721567:-1:exon
so has part: feature:3718644-3718852:-1:exon
so has part: feature:3700132-3700246:-1:exon
so has part: feature:3694245-3694374:-1:exon
so has part: feature:3680598-3680711:-1:exon
so has part: feature:3679545-3679855:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3813694-3813719:-1:exon

position:3813694:-1
position: 3813694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3808542-3808613:-1:exon

position:3808542:-1
position: 3808542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3808613:-1
position: 3808613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3803594-3803665:-1:exon

position:3803594:-1
position: 3803594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3803665:-1
position: 3803665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3797797-3797966:-1:exon

position:3797797:-1
position: 3797797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3797966:-1
position: 3797966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3795364-3795481:-1:exon

position:3795364:-1
position: 3795364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3795481:-1
position: 3795481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3788659-3788825:-1:exon

position:3788659:-1
position: 3788659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3788825:-1
position: 3788825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3784396-3784662:-1:exon

position:3784396:-1
position: 3784396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3784662:-1
position: 3784662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3780090-3780206:-1:exon

position:3780090:-1
position: 3780090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3780206:-1
position: 3780206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3778192-3778350:-1:exon

position:3778192:-1
position: 3778192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3778350:-1
position: 3778350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3764880-3764992:-1:exon

position:3764880:-1
position: 3764880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3764992:-1
position: 3764992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3762169-3762325:-1:exon

position:3762169:-1
position: 3762169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3762325:-1
position: 3762325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3761445-3761588:-1:exon

position:3761445:-1
position: 3761445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3761588:-1
position: 3761588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3753036-3753144:-1:exon

position:3753036:-1
position: 3753036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3753144:-1
position: 3753144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3751393-3751550:-1:exon

position:3751393:-1
position: 3751393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3751550:-1
position: 3751550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3749382-3749560:-1:exon

position:3749382:-1
position: 3749382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3749560:-1
position: 3749560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3748538-3749250:-1:exon

position:3748538:-1
position: 3748538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3749250:-1
position: 3749250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3721433-3721567:-1:exon

position:3721433:-1
position: 3721433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3721567:-1
position: 3721567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3718644-3718852:-1:exon

position:3718644:-1
position: 3718644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3718852:-1
position: 3718852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3700132-3700246:-1:exon

position:3700132:-1
position: 3700132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3700246:-1
position: 3700246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3694245-3694374:-1:exon

position:3694245:-1
position: 3694245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3694374:-1
position: 3694374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3680598-3680711:-1:exon

position:3680598:-1
position: 3680598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3680711:-1
position: 3680711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3679545-3679855:-1:exon

position:3679855:-1
position: 3679855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PXDNL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: PXDNL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peroxidasin-like protein
translation: MEEDGPAQSYIHFNQIETLQPETFGDLVKLERLFLHHNKLSKVLPGSFSHLDSLQRLRLDSNALVCDCDLMSLGELLRGYAQNGQIQAAATCHYPRRLQGRSVASVTVEEFNCESPRITFEPQDVEVTSGNTVYFTCRAEGNPKPKIIWIHNNQSLDLDDTRLNMFADGTLMIRNTRESDQGEYQCMARNSAGEVRTQNAVLRHSSPPAKPRFITQPQDTEVLVGMSITLECVATGHPHPHITWRRGRGEALDASRHLATSGGLYLQNITLRDHGPFTCHADNTQGSVQATANIIVQAPPRFTIIPKDQMVLEGHSVEFLCEAEGNPPPIIAWTKAGGQLLQESPRTVLSSGTLRIDHTAHHDEGQYECQAVSPLGVKKASVQLTVKPKAFPVFTQPPQDTSVQVGKNVNISCHAQGAPQPVITWNKAGVQVTESGKFHISGEGTLTIYDAGPADHGRYECVARNAFGFVVAPMFLTVVVCVGSESLSLGRPRWPPQPRPWKWRWAMMDAKVSAGKAFKQHSAWGPVTIQGRQAGDDFVESSILDAIQRVDSAINSTQRHLFSQKPRTPGDLLALFHYPHDPFTLETARAGEIFEHTLLLIQEHVKQGLGVGAQGREFRYNDLVSPHALSRIANLSGCTAHRRAPDCSALCFHRKYRAADGACNNLRHPAWGASRTCGGPCFLAGDHRANQQVALTALHTLWFREHNRVATALAALNPHWDGDTLYHEARKVVGAQLQHITYSHWLPKILGDPGMRMLGRYRGYDPDVNAGIANSFATAAFKFGHTFISPVLQRLNDTFGEIPQGHLPLHKAFFAPSRIIEEGGIDPLLRGLFGAAARLRVPSPPPSLEPTEQLFRSARSVALDLAATNIQRGRDHGLPPYADFRVFCNLSSVESFEDLQNEIKDAGIRQKLEKLYGSPGSIDLWPALMVEDLIPGTRVGPTLMCLFVTQFQRLRDGDRFWYENPGVFTPAQLTQLRQASLGRVLCDNGDNIRQVQADVFVTAQYPQDYLSCSEIPQVDLRPWQDCCEDCRSRGQFREFTEESRKKRSAQYSYPDEKEKNLHDPNRGQQDHLYADEDGRNVTLLARAKFAQDFSNFATEIQNTIKALREQINKLEARLGQAGCTDDEGVWRKDRERWVKEEGVRCTCKSGQVTCVVETSPGGTPQN
SIO_010081: PXDNL
subclass of: SO_0000673
so part of: PXDNL
location: complement(join(3679799..3679855,3680598..3680711,3694245..3694374,3700132..3700246,3718644..3718852,3721433..3721567,3748538..3749250,3749382..3749560,3751393..3751550,3753036..3753144,3761445..3761588,3762169..3762325,3764880..3764992,3778192..3778350,3780090..3780206,3784396..3784662,3788659..3788825,3795364..3795481,3797797..3797966,3803594..3803665,3808542..3808613,3813694..3813719))
location: region:3679799-3813719:-1
so has part: feature:3813694-3813719:-1:exon
so has part: feature:3808542-3808613:-1:exon
so has part: feature:3803594-3803665:-1:exon
so has part: feature:3797797-3797966:-1:exon
so has part: feature:3795364-3795481:-1:exon
so has part: feature:3788659-3788825:-1:exon
so has part: feature:3784396-3784662:-1:exon
so has part: feature:3780090-3780206:-1:exon
so has part: feature:3778192-3778350:-1:exon
so has part: feature:3764880-3764992:-1:exon
so has part: feature:3762169-3762325:-1:exon
so has part: feature:3761445-3761588:-1:exon
so has part: feature:3753036-3753144:-1:exon
so has part: feature:3751393-3751550:-1:exon
so has part: feature:3749382-3749560:-1:exon
so has part: feature:3748538-3749250:-1:exon
so has part: feature:3721433-3721567:-1:exon
so has part: feature:3718644-3718852:-1:exon
so has part: feature:3700132-3700246:-1:exon
so has part: feature:3694245-3694374:-1:exon
so has part: feature:3680598-3680711:-1:exon
so has part: feature:3679799-3679855:-1:exon

XP_029779862.1
type: Protein
SIO_000068: ncbiprotein

position:3679799:-1
position: 3679799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3813694-3813719:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3808542-3808613:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3803594-3803665:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3797797-3797966:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3795364-3795481:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3788659-3788825:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3784396-3784662:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3780090-3780206:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3778192-3778350:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3764880-3764992:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3762169-3762325:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3761445-3761588:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3753036-3753144:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3751393-3751550:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3749382-3749560:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3748538-3749250:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3721433-3721567:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3718644-3718852:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3700132-3700246:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3694245-3694374:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3680598-3680711:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3679799-3679855:-1:exon

LOC115279259
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115279259
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3992425..3994189
location: region:3992425-3994189:1
so has part: feature:3992425-3994189:1:exon
subclass of: SO_0000011

115279259
type: Gene
SIO_000068: ncbigene

position:3992425:1
position: 3992425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3994189:1
position: 3994189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3992425-3994189:1:exon

LOC115279259
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115279259
product: uncharacterized LOC115279259, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003903311.1
SIO_010081: LOC115279259
subclass of: SO_0000673
so part of: LOC115279259
location: join(3992425..3992559,3992792..3992884,3993371..3994189)
location: region:3992425-3994189:1
so has part: feature:3992425-3992559:1:exon
so has part: feature:3992792-3992884:1:exon
so has part: feature:3993371-3994189:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3992425-3992559:1:exon

position:3992559:1
position: 3992559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3992792-3992884:1:exon

position:3992792:1
position: 3992792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3992884:1
position: 3992884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3993371-3994189:1:exon

position:3993371:1
position: 3993371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115279259
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115279259
product: uncharacterized LOC115279259, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003903312.1
SIO_010081: LOC115279259
subclass of: SO_0000673
so part of: LOC115279259
location: join(3992425..3992559,3992792..3992884,3994061..3994189)
location: region:3992425-3994189:1
so has part: feature:3992425-3992559:1:exon
so has part: feature:3992792-3992884:1:exon
so has part: feature:3994061-3994189:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3992425-3992559:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3992792-3992884:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3994061-3994189:1:exon

position:3994061:1
position: 3994061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115279447
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115279447
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4035225..4036701
location: region:4035225-4036701:1
so has part: feature:4035225-4036701:1:exon

115279447
type: Gene
SIO_000068: ncbigene

position:4035225:1
position: 4035225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4036701:1
position: 4036701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4035225-4036701:1:exon

LOC115279447
type: Exon
subclass of: SO_0000147
RO_0002162: 37032
gene: LOC115279447
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC115279447
subclass of: SO_0000673
so part of: LOC115279447
location: 4035225..4035253
location: region:4035225-4035253:1
so has part: feature:4035225-4035253:1:exon

position:4035253:1
position: 4035253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4035225-4035253:1:exon

LOC115279447
type: Exon
subclass of: SO_0000147
RO_0002162: 37032
gene: LOC115279447
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC115279447
subclass of: SO_0000673
so part of: LOC115279447
location: 4035296..4036701
location: region:4035296-4036701:1
so has part: feature:4035296-4036701:1:exon

position:4035296:1
position: 4035296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4035296-4036701:1:exon

PCMTD1
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: PCMTD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4089132..4157012)
location: region:4089132-4157012:-1
so has part: feature:4089132-4157012:-1:exon
subclass of: SO_0000010

115278627
type: Gene
SIO_000068: ncbigene

position:4089132:-1
position: 4089132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4157012:-1
position: 4157012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4089132-4157012:-1:exon

PCMTD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: PCMTD1
product: protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_029923044.1
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(4089132..4091723,4100149..4100272,4102334..4102505,4113793..4113895,4127220..4127650,4156816..4157005))
location: region:4089132-4157005:-1
so has part: feature:4156816-4157005:-1:exon
so has part: feature:4127220-4127650:-1:exon
so has part: feature:4113793-4113895:-1:exon
so has part: feature:4102334-4102505:-1:exon
so has part: feature:4100149-4100272:-1:exon
so has part: feature:4089132-4091723:-1:exon

position:4157005:-1
position: 4157005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4156816-4157005:-1:exon

position:4156816:-1
position: 4156816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4127220-4127650:-1:exon

position:4127220:-1
position: 4127220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4127650:-1
position: 4127650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4113793-4113895:-1:exon

position:4113793:-1
position: 4113793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4113895:-1
position: 4113895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4102334-4102505:-1:exon

position:4102334:-1
position: 4102334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4102505:-1
position: 4102505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4100149-4100272:-1:exon

position:4100149:-1
position: 4100149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4100272:-1
position: 4100272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4089132-4091723:-1:exon

position:4091723:-1
position: 4091723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCMTD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: PCMTD1
product: protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_029923045.1
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(4089132..4091723,4100149..4100272,4102334..4102505,4113793..4113895,4127220..4127650,4155923..4155980))
location: region:4089132-4155980:-1
so has part: feature:4155923-4155980:-1:exon
so has part: feature:4127220-4127650:-1:exon
so has part: feature:4113793-4113895:-1:exon
so has part: feature:4102334-4102505:-1:exon
so has part: feature:4100149-4100272:-1:exon
so has part: feature:4089132-4091723:-1:exon

position:4155980:-1
position: 4155980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4155923-4155980:-1:exon

position:4155923:-1
position: 4155923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4127220-4127650:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4113793-4113895:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4102334-4102505:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4100149-4100272:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4089132-4091723:-1:exon

PCMTD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: PCMTD1
product: protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_029923047.1
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(4089132..4091723,4100149..4100272,4102334..4102505,4113793..4113895,4127220..4127650,4130494..4130537))
location: region:4089132-4130537:-1
so has part: feature:4130494-4130537:-1:exon
so has part: feature:4127220-4127650:-1:exon
so has part: feature:4113793-4113895:-1:exon
so has part: feature:4102334-4102505:-1:exon
so has part: feature:4100149-4100272:-1:exon
so has part: feature:4089132-4091723:-1:exon

position:4130537:-1
position: 4130537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4130494-4130537:-1:exon

position:4130494:-1
position: 4130494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4127220-4127650:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4113793-4113895:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4102334-4102505:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4100149-4100272:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4089132-4091723:-1:exon

PCMTD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: PCMTD1
product: protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_029923049.1
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(4089132..4091723,4100149..4100272,4102334..4102505,4108029..4108220,4113793..4113895,4127236..4127323))
location: region:4089132-4127323:-1
so has part: feature:4127236-4127323:-1:exon
so has part: feature:4113793-4113895:-1:exon
so has part: feature:4108029-4108220:-1:exon
so has part: feature:4102334-4102505:-1:exon
so has part: feature:4100149-4100272:-1:exon
so has part: feature:4089132-4091723:-1:exon

position:4127323:-1
position: 4127323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4127236-4127323:-1:exon

position:4127236:-1
position: 4127236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4113793-4113895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4108029-4108220:-1:exon

position:4108029:-1
position: 4108029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4108220:-1
position: 4108220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4102334-4102505:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4100149-4100272:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4089132-4091723:-1:exon

PCMTD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: PCMTD1
product: protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_029923050.1
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(4089132..4091723,4100149..4100272,4102334..4102505,4127220..4127284))
location: region:4089132-4127284:-1
so has part: feature:4127220-4127284:-1:exon
so has part: feature:4102334-4102505:-1:exon
so has part: feature:4100149-4100272:-1:exon
so has part: feature:4089132-4091723:-1:exon

position:4127284:-1
position: 4127284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4127220-4127284:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4102334-4102505:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4100149-4100272:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4089132-4091723:-1:exon

PCMTD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: PCMTD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-L-isoaspartate O-methyltransferase domain-containing protein 1 isoform X1
translation: MGGAVSAGEDNDDLIDNLKEAQYIRTERVEQAFRAIDRGDYYLDGYRDSAYKDLAWKHGNIHLSAPCIYSEVMEALKLQPGLSFLNLGSGTGYLSTMVGLILGPFGINHGIELHSDVVEYAKEKLESFIKNSDSFDKFEFCEPAFVVGNCLQIASDSHQYDRIYCGAGVQKDHENYMKILLKVGGILVMPIEDQLTQIMRTGQNTWESKNILAVSFAPLVQPSKNDNGKPDSVGLPPCAVRNLQDLARIYIRRTLRNFINDELQAKGVPQRAPPKRKRKRVKQRINTYVFVGNQLIPQPLDSEEDDRMEEDNKEEEEKDHSEVVKPEEPPQNLLREKIMKLPLPESLKAYLTYFREK
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(4091356..4091723,4100149..4100272,4102334..4102505,4113793..4113895,4127220..4127526))
location: region:4091356-4127526:-1
so has part: feature:4127220-4127526:-1:exon
so has part: feature:4113793-4113895:-1:exon
so has part: feature:4102334-4102505:-1:exon
so has part: feature:4100149-4100272:-1:exon
so has part: feature:4091356-4091723:-1:exon

XP_029778904.1
type: Protein
SIO_000068: ncbiprotein

position:4091356:-1
position: 4091356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4127526:-1
position: 4127526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4127220-4127526:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4113793-4113895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4102334-4102505:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4100149-4100272:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4091356-4091723:-1:exon

PCMTD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: PCMTD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-L-isoaspartate O-methyltransferase domain-containing protein 1 isoform X1
translation: MGGAVSAGEDNDDLIDNLKEAQYIRTERVEQAFRAIDRGDYYLDGYRDSAYKDLAWKHGNIHLSAPCIYSEVMEALKLQPGLSFLNLGSGTGYLSTMVGLILGPFGINHGIELHSDVVEYAKEKLESFIKNSDSFDKFEFCEPAFVVGNCLQIASDSHQYDRIYCGAGVQKDHENYMKILLKVGGILVMPIEDQLTQIMRTGQNTWESKNILAVSFAPLVQPSKNDNGKPDSVGLPPCAVRNLQDLARIYIRRTLRNFINDELQAKGVPQRAPPKRKRKRVKQRINTYVFVGNQLIPQPLDSEEDDRMEEDNKEEEEKDHSEVVKPEEPPQNLLREKIMKLPLPESLKAYLTYFREK
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(4091356..4091723,4100149..4100272,4102334..4102505,4113793..4113895,4127220..4127526))
location: region:4091356-4127526:-1
so has part: feature:4127220-4127526:-1:exon
so has part: feature:4113793-4113895:-1:exon
so has part: feature:4102334-4102505:-1:exon
so has part: feature:4100149-4100272:-1:exon
so has part: feature:4091356-4091723:-1:exon

XP_029778905.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4127220-4127526:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4113793-4113895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4102334-4102505:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4100149-4100272:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4091356-4091723:-1:exon

PCMTD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: PCMTD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-L-isoaspartate O-methyltransferase domain-containing protein 1 isoform X1
translation: MGGAVSAGEDNDDLIDNLKEAQYIRTERVEQAFRAIDRGDYYLDGYRDSAYKDLAWKHGNIHLSAPCIYSEVMEALKLQPGLSFLNLGSGTGYLSTMVGLILGPFGINHGIELHSDVVEYAKEKLESFIKNSDSFDKFEFCEPAFVVGNCLQIASDSHQYDRIYCGAGVQKDHENYMKILLKVGGILVMPIEDQLTQIMRTGQNTWESKNILAVSFAPLVQPSKNDNGKPDSVGLPPCAVRNLQDLARIYIRRTLRNFINDELQAKGVPQRAPPKRKRKRVKQRINTYVFVGNQLIPQPLDSEEDDRMEEDNKEEEEKDHSEVVKPEEPPQNLLREKIMKLPLPESLKAYLTYFREK
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(4091356..4091723,4100149..4100272,4102334..4102505,4113793..4113895,4127220..4127526))
location: region:4091356-4127526:-1
so has part: feature:4127220-4127526:-1:exon
so has part: feature:4113793-4113895:-1:exon
so has part: feature:4102334-4102505:-1:exon
so has part: feature:4100149-4100272:-1:exon
so has part: feature:4091356-4091723:-1:exon

XP_029778907.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4127220-4127526:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4113793-4113895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4102334-4102505:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4100149-4100272:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4091356-4091723:-1:exon

PCMTD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: PCMTD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-L-isoaspartate O-methyltransferase domain-containing protein 1 isoform X3
translation: MKILLKVGGILVMPIEDQLTQIMRTGQNTWESKNILAVSFAPLVQPSKNDNGKPDSVGLPPCAVRNLQDLARIYIRRTLRNFINDELQAKGVPQRAPPKRKRKRVKQRINTYVFVGNQLIPQPLDSEEDDRMEEDNKEEEEKDHSEVVKPEEPPQNLLREKIMKLPLPESLKAYLTYFREK
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(4091356..4091723,4100149..4100272,4102334..4102387))
location: region:4091356-4102387:-1
so has part: feature:4102334-4102387:-1:exon
so has part: feature:4100149-4100272:-1:exon
so has part: feature:4091356-4091723:-1:exon

XP_029778909.1
type: Protein
SIO_000068: ncbiprotein

position:4102387:-1
position: 4102387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4102334-4102387:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4100149-4100272:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4091356-4091723:-1:exon

PCMTD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: PCMTD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-L-isoaspartate O-methyltransferase domain-containing protein 1 isoform X3
translation: MKILLKVGGILVMPIEDQLTQIMRTGQNTWESKNILAVSFAPLVQPSKNDNGKPDSVGLPPCAVRNLQDLARIYIRRTLRNFINDELQAKGVPQRAPPKRKRKRVKQRINTYVFVGNQLIPQPLDSEEDDRMEEDNKEEEEKDHSEVVKPEEPPQNLLREKIMKLPLPESLKAYLTYFREK
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(4091356..4091723,4100149..4100272,4102334..4102387))
location: region:4091356-4102387:-1
so has part: feature:4102334-4102387:-1:exon
so has part: feature:4100149-4100272:-1:exon
so has part: feature:4091356-4091723:-1:exon

XP_029778910.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4102334-4102387:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4100149-4100272:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4091356-4091723:-1:exon

PCMTD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: PCMTD1
product: protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_029923048.1
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(4099714..4099881,4100149..4100272,4102334..4102505,4113793..4113895,4127220..4127650,4156816..4157012))
location: region:4099714-4157012:-1
so has part: feature:4156816-4157012:-1:exon
so has part: feature:4127220-4127650:-1:exon
so has part: feature:4113793-4113895:-1:exon
so has part: feature:4102334-4102505:-1:exon
so has part: feature:4100149-4100272:-1:exon
so has part: feature:4099714-4099881:-1:exon

position:4099714:-1
position: 4099714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4156816-4157012:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4127220-4127650:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4113793-4113895:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4102334-4102505:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4100149-4100272:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4099714-4099881:-1:exon

position:4099881:-1
position: 4099881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCMTD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: PCMTD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-L-isoaspartate O-methyltransferase domain-containing protein 1 isoform X2
translation: MGGAVSAGEDNDDLIDNLKEAQYIRTERVEQAFRAIDRGDYYLDGYRDSAYKDLAWKHGNIHLSAPCIYSEVMEALKLQPGLSFLNLGSGTGYLSTMVGLILGPFGINHGIELHSDVVEYAKEKLESFIKNSDSFDKFEFCEPAFVVGNCLQIASDSHQYDRIYCGAGVQKDHENYMKILLKVGGILVMPIEDQLTQIMRTGQNTWESKNILAVSFAPLVQPSKNDNGKPDSVGLQGRQIQKPLFELLVPRPEISFRVVEARWLECRR
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(4099781..4099881,4100149..4100272,4102334..4102505,4113793..4113895,4127220..4127526))
location: region:4099781-4127526:-1
so has part: feature:4127220-4127526:-1:exon
so has part: feature:4113793-4113895:-1:exon
so has part: feature:4102334-4102505:-1:exon
so has part: feature:4100149-4100272:-1:exon
so has part: feature:4099781-4099881:-1:exon

XP_029778908.1
type: Protein
SIO_000068: ncbiprotein

position:4099781:-1
position: 4099781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4127220-4127526:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4113793-4113895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4102334-4102505:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4100149-4100272:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4099781-4099881:-1:exon

LOC115278671
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115278671
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4214242..4220827
location: region:4214242-4220827:1
so has part: feature:4214242-4220827:1:exon
subclass of: SO_0000011

115278671
type: Gene
SIO_000068: ncbigene

position:4214242:1
position: 4214242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4220827:1
position: 4220827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4214242-4220827:1:exon

LOC115278671
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115278671
product: uncharacterized LOC115278671, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_003903019.1
SIO_010081: LOC115278671
subclass of: SO_0000673
so part of: LOC115278671
location: join(4214242..4214385,4220280..4220407,4220533..4220827)
location: region:4214242-4220827:1
so has part: feature:4214242-4214385:1:exon
so has part: feature:4220280-4220407:1:exon
so has part: feature:4220533-4220827:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4214242-4214385:1:exon

position:4214385:1
position: 4214385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4220280-4220407:1:exon

position:4220280:1
position: 4220280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4220407:1
position: 4220407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4220533-4220827:1:exon

position:4220533:1
position: 4220533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115278671
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115278671
product: uncharacterized LOC115278671, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003903020.1
SIO_010081: LOC115278671
subclass of: SO_0000673
so part of: LOC115278671
location: join(4214242..4214385,4220533..4220827)
location: region:4214242-4220827:1
so has part: feature:4214242-4214385:1:exon
so has part: feature:4220533-4220827:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4214242-4214385:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4220533-4220827:1:exon

LOC115278713
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115278713
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4254871..4255637)
location: region:4254871-4255637:-1
so has part: feature:4254871-4255637:-1:exon
subclass of: SO_0000011

115278713
type: Gene
SIO_000068: ncbigene

position:4254871:-1
position: 4254871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4255637:-1
position: 4255637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4254871-4255637:-1:exon

LOC115278713
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115278713
product: uncharacterized LOC115278713
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003903054.1
SIO_010081: LOC115278713
subclass of: SO_0000673
so part of: LOC115278713
location: complement(join(4254871..4254994,4255451..4255637))
location: region:4254871-4255637:-1
so has part: feature:4255451-4255637:-1:exon
so has part: feature:4254871-4254994:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4255451-4255637:-1:exon

position:4255451:-1
position: 4255451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4254871-4254994:-1:exon

position:4254994:-1
position: 4254994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115279332
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115279332
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4298483..4310805
location: region:4298483-4310805:1
so has part: feature:4298483-4310805:1:exon
subclass of: SO_0000011

115279332
type: Gene
SIO_000068: ncbigene

position:4298483:1
position: 4298483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4310805:1
position: 4310805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4298483-4310805:1:exon

LOC115279332
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115279332
product: uncharacterized LOC115279332, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003903370.1
SIO_010081: LOC115279332
subclass of: SO_0000673
so part of: LOC115279332
location: join(4298483..4298705,4301063..4301216,4307336..4307512,4308353..4308543,4310746..4310805)
location: region:4298483-4310805:1
so has part: feature:4298483-4298705:1:exon
so has part: feature:4301063-4301216:1:exon
so has part: feature:4307336-4307512:1:exon
so has part: feature:4308353-4308543:1:exon
so has part: feature:4310746-4310805:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4298483-4298705:1:exon

position:4298705:1
position: 4298705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4301063-4301216:1:exon

position:4301063:1
position: 4301063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4301216:1
position: 4301216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4307336-4307512:1:exon

position:4307336:1
position: 4307336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4307512:1
position: 4307512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4308353-4308543:1:exon

position:4308353:1
position: 4308353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4308543:1
position: 4308543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4310746-4310805:1:exon

position:4310746:1
position: 4310746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115279332
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115279332
product: uncharacterized LOC115279332, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003903369.1
SIO_010081: LOC115279332
subclass of: SO_0000673
so part of: LOC115279332
location: join(4298483..4298705,4301063..4301216,4307336..4307512,4308353..4308621)
location: region:4298483-4308621:1
so has part: feature:4298483-4298705:1:exon
so has part: feature:4301063-4301216:1:exon
so has part: feature:4307336-4307512:1:exon
so has part: feature:4308353-4308621:1:exon

position:4308621:1
position: 4308621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4298483-4298705:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4301063-4301216:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4307336-4307512:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4308353-4308621:1:exon

ST18
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: ST18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4361636..4509809)
location: region:4361636-4509809:-1
so has part: feature:4361636-4509809:-1:exon
subclass of: SO_0000010

115279244
type: Gene
SIO_000068: ncbigene

position:4361636:-1
position: 4361636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4509809:-1
position: 4509809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4361636-4509809:-1:exon

ST18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: ST18
product: ST18 C2H2C-type zinc finger transcription factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029923786.1
SIO_010081: ST18
subclass of: SO_0000673
so part of: ST18
location: complement(join(4361636..4361978,4364613..4364756,4366585..4366688,4373399..4373487,4378327..4378548,4379725..4379805,4379907..4379969,4382918..4382986,4383806..4383868,4390458..4390511,4392515..4392630,4399044..4399289,4407578..4407789,4409919..4410112,4412821..4412925,4414188..4414278,4415950..4416084,4420857..4421648,4430000..4430199,4470522..4470552,4472860..4472914,4479374..4479477,4480197..4480350,4488310..4488352,4508376..4508404,4509759..4509809))
location: region:4361636-4509809:-1
so has part: feature:4509759-4509809:-1:exon
so has part: feature:4508376-4508404:-1:exon
so has part: feature:4488310-4488352:-1:exon
so has part: feature:4480197-4480350:-1:exon
so has part: feature:4479374-4479477:-1:exon
so has part: feature:4472860-4472914:-1:exon
so has part: feature:4470522-4470552:-1:exon
so has part: feature:4430000-4430199:-1:exon
so has part: feature:4420857-4421648:-1:exon
so has part: feature:4415950-4416084:-1:exon
so has part: feature:4414188-4414278:-1:exon
so has part: feature:4412821-4412925:-1:exon
so has part: feature:4409919-4410112:-1:exon
so has part: feature:4407578-4407789:-1:exon
so has part: feature:4399044-4399289:-1:exon
so has part: feature:4392515-4392630:-1:exon
so has part: feature:4390458-4390511:-1:exon
so has part: feature:4383806-4383868:-1:exon
so has part: feature:4382918-4382986:-1:exon
so has part: feature:4379907-4379969:-1:exon
so has part: feature:4379725-4379805:-1:exon
so has part: feature:4378327-4378548:-1:exon
so has part: feature:4373399-4373487:-1:exon
so has part: feature:4366585-4366688:-1:exon
so has part: feature:4364613-4364756:-1:exon
so has part: feature:4361636-4361978:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4509759-4509809:-1:exon

position:4509759:-1
position: 4509759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4508376-4508404:-1:exon

position:4508376:-1
position: 4508376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4508404:-1
position: 4508404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4488310-4488352:-1:exon

position:4488310:-1
position: 4488310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4488352:-1
position: 4488352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4480197-4480350:-1:exon

position:4480197:-1
position: 4480197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4480350:-1
position: 4480350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4479374-4479477:-1:exon

position:4479374:-1
position: 4479374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4479477:-1
position: 4479477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4472860-4472914:-1:exon

position:4472860:-1
position: 4472860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4472914:-1
position: 4472914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4470522-4470552:-1:exon

position:4470522:-1
position: 4470522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4470552:-1
position: 4470552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4430000-4430199:-1:exon

position:4430000:-1
position: 4430000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4430199:-1
position: 4430199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4420857-4421648:-1:exon

position:4420857:-1
position: 4420857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4421648:-1
position: 4421648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4415950-4416084:-1:exon

position:4415950:-1
position: 4415950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4416084:-1
position: 4416084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4414188-4414278:-1:exon

position:4414188:-1
position: 4414188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4414278:-1
position: 4414278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4412821-4412925:-1:exon

position:4412821:-1
position: 4412821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4412925:-1
position: 4412925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4409919-4410112:-1:exon

position:4409919:-1
position: 4409919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4410112:-1
position: 4410112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4407578-4407789:-1:exon

position:4407578:-1
position: 4407578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4407789:-1
position: 4407789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4399044-4399289:-1:exon

position:4399044:-1
position: 4399044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4399289:-1
position: 4399289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4392515-4392630:-1:exon

position:4392515:-1
position: 4392515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4392630:-1
position: 4392630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4390458-4390511:-1:exon

position:4390458:-1
position: 4390458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4390511:-1
position: 4390511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4383806-4383868:-1:exon

position:4383806:-1
position: 4383806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4383868:-1
position: 4383868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4382918-4382986:-1:exon

position:4382918:-1
position: 4382918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4382986:-1
position: 4382986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4379907-4379969:-1:exon

position:4379907:-1
position: 4379907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4379969:-1
position: 4379969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4379725-4379805:-1:exon

position:4379725:-1
position: 4379725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4379805:-1
position: 4379805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4378327-4378548:-1:exon

position:4378327:-1
position: 4378327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4378548:-1
position: 4378548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4373399-4373487:-1:exon

position:4373399:-1
position: 4373399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4373487:-1
position: 4373487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:4366585-4366688:-1:exon

position:4366585:-1
position: 4366585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4366688:-1
position: 4366688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:4364613-4364756:-1:exon

position:4364613:-1
position: 4364613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4364756:-1
position: 4364756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:4361636-4361978:-1:exon

position:4361978:-1
position: 4361978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ST18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: ST18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppression of tumorigenicity 18 protein
translation: MEAEAEDKTLRTRSKGTKVPIDSLIQELSAAYDCSMAKKRRAAEQALGVPVNKRKSLLMKPRHYSPNMDCREECDERTEAEEEDGLPEAGNHTTTGETMIKPRDEHLHATAQENSNGKEDSYGCYQELVVKSLMHLGKFEKNVSIQTIRENLNGSGIQPLKAESDEADECFLIHPDHGKLKIDDPEVQFCSSDDSESNSESAEYAWDSGSSFSEETKPPRVPKYILADNRKDLLEVPEIKTEGDKFLSCENVCDSDTDRRDPQNACMETLDGKGQPSFAGMEADGSESLGTRAEESLDLEKAKGGLRVLEQASALQTDRGCVFHHTYRELDRFLLEHLAGERRQTKVIDMGGRQIFNSKHSPRPEKRETKCPIPGCDGTGHVTGLYPHHRSLSGCPHKVRVPLEILAMHENVLKCPTPGCTGRGHVNSNRNTHRSLSGCPIAAAEKLAMSQDKSQLDSPKAGQCPDQVHRTSLVKQIEFNFRSQAITSPRATVSKEQEKFGKVPFDYASFDAQVFGKRPLVQTGQGRKTPPFPESKHFSNPGKFPNRLPSAGAHTQSPGQASSYSYGQCGEDTHIAAAAAILNLSTRCREAADILSNKPQSLHAKGAEIEVDENGTLDLSLKKNRILDKAAPLTSSNTSIPTPSSSPFKTSSILVNAAFYQALCDQEGWDTPVNYSKAHGKTEEEKEKDPVSTLENLEEKKFPGEASIPSPKPKLHARDLKKELITSSSSDPTDSRRLQKTVFHCPTPGCDGSGHVTGNYASHRSVSGCPLADKTLKSLMAANSQELKCPTPGCDGSGHVTGNYASHRSLSGCPRARKGGVKMTPMKEEKEDPELKCPVMGCDGQGHTSGKYTSHRTASGCPLAAKRQKENPLNGAPLSWKLNKQELPHCPLPGCNGLGHVNNVFVTHRSLSGCPLNAQAIKKGKVSEELMTIKLKATGGIESDEEIRHLDEEIKELNESNLKIEADMMKLQTQITSMESNLKTIEEENKLIEQNNESLLKELAGLSQALISSLADIQLPQMGPISEQNFEAYVNTLTDMYSNLEPDSSPECKALLESIKQAVKGIHV
SIO_010081: ST18
subclass of: SO_0000673
so part of: ST18
location: complement(join(4361838..4361978,4364613..4364756,4366585..4366688,4373399..4373487,4378327..4378548,4379725..4379805,4379907..4379969,4382918..4382986,4383806..4383868,4390458..4390511,4392515..4392630,4399044..4399289,4407578..4407789,4409919..4410112,4412821..4412925,4414188..4414278,4415950..4416084,4420857..4421648,4430000..4430199,4470522..4470552,4472860..4472914))
location: region:4361838-4472914:-1
so has part: feature:4472860-4472914:-1:exon
so has part: feature:4470522-4470552:-1:exon
so has part: feature:4430000-4430199:-1:exon
so has part: feature:4420857-4421648:-1:exon
so has part: feature:4415950-4416084:-1:exon
so has part: feature:4414188-4414278:-1:exon
so has part: feature:4412821-4412925:-1:exon
so has part: feature:4409919-4410112:-1:exon
so has part: feature:4407578-4407789:-1:exon
so has part: feature:4399044-4399289:-1:exon
so has part: feature:4392515-4392630:-1:exon
so has part: feature:4390458-4390511:-1:exon
so has part: feature:4383806-4383868:-1:exon
so has part: feature:4382918-4382986:-1:exon
so has part: feature:4379907-4379969:-1:exon
so has part: feature:4379725-4379805:-1:exon
so has part: feature:4378327-4378548:-1:exon
so has part: feature:4373399-4373487:-1:exon
so has part: feature:4366585-4366688:-1:exon
so has part: feature:4364613-4364756:-1:exon
so has part: feature:4361838-4361978:-1:exon

XP_029779646.1
type: Protein
SIO_000068: ncbiprotein

position:4361838:-1
position: 4361838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4472860-4472914:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4470522-4470552:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4430000-4430199:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4420857-4421648:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4415950-4416084:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4414188-4414278:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4412821-4412925:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4409919-4410112:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4407578-4407789:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4399044-4399289:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4392515-4392630:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4390458-4390511:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4383806-4383868:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4382918-4382986:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4379907-4379969:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4379725-4379805:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4378327-4378548:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4373399-4373487:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4366585-4366688:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4364613-4364756:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4361838-4361978:-1:exon

LOC115279245
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115279245
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4417648..4420855
location: region:4417648-4420855:1
so has part: feature:4417648-4420855:1:exon
subclass of: SO_0000011

115279245
type: Gene
SIO_000068: ncbigene

position:4417648:1
position: 4417648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4420855:1
position: 4420855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4417648-4420855:1:exon

LOC115279245
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115279245
product: uncharacterized LOC115279245, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003903305.1
SIO_010081: LOC115279245
subclass of: SO_0000673
so part of: LOC115279245
location: join(4417648..4417748,4418628..4418786,4419563..4419598,4420635..4420855)
location: region:4417648-4420855:1
so has part: feature:4417648-4417748:1:exon
so has part: feature:4418628-4418786:1:exon
so has part: feature:4419563-4419598:1:exon
so has part: feature:4420635-4420855:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4417648-4417748:1:exon

position:4417748:1
position: 4417748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4418628-4418786:1:exon

position:4418628:1
position: 4418628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4418786:1
position: 4418786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4419563-4419598:1:exon

position:4419563:1
position: 4419563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4419598:1
position: 4419598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4420635-4420855:1:exon

position:4420635:1
position: 4420635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115279245
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115279245
product: uncharacterized LOC115279245, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003903304.1
SIO_010081: LOC115279245
subclass of: SO_0000673
so part of: LOC115279245
location: join(4417722..4417748,4418558..4418786,4419563..4419598,4420635..4420855)
location: region:4417722-4420855:1
so has part: feature:4417722-4417748:1:exon
so has part: feature:4418558-4418786:1:exon
so has part: feature:4419563-4419598:1:exon
so has part: feature:4420635-4420855:1:exon

position:4417722:1
position: 4417722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4417722-4417748:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4418558-4418786:1:exon

position:4418558:1
position: 4418558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4419563-4419598:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4420635-4420855:1:exon

LOC115278699
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115278699
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4823528..4827204)
location: region:4823528-4827204:-1
so has part: feature:4823528-4827204:-1:exon
subclass of: SO_0000011

115278699
type: Gene
SIO_000068: ncbigene

position:4823528:-1
position: 4823528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4827204:-1
position: 4827204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4823528-4827204:-1:exon

LOC115278699
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115278699
product: uncharacterized LOC115278699
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003903045.1
SIO_010081: LOC115278699
subclass of: SO_0000673
so part of: LOC115278699
location: complement(join(4823528..4824015,4826210..4826289,4827183..4827204))
location: region:4823528-4827204:-1
so has part: feature:4827183-4827204:-1:exon
so has part: feature:4826210-4826289:-1:exon
so has part: feature:4823528-4824015:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4827183-4827204:-1:exon

position:4827183:-1
position: 4827183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4826210-4826289:-1:exon

position:4826210:-1
position: 4826210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4826289:-1
position: 4826289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4823528-4824015:-1:exon

position:4824015:-1
position: 4824015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RB1CC1
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: RB1CC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4850764..4941184)
location: region:4850764-4941184:-1
so has part: feature:4850764-4941184:-1:exon
subclass of: SO_0000010

115279376
type: Gene
SIO_000068: ncbigene

position:4850764:-1
position: 4850764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4941184:-1
position: 4941184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4850764-4941184:-1:exon

RB1CC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: RB1CC1
product: RB1 inducible coiled-coil 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_029923935.1
SIO_010081: RB1CC1
subclass of: SO_0000673
so part of: RB1CC1
location: complement(join(4850764..4852147,4852917..4852987,4855268..4855395,4857041..4857099,4859264..4859311,4860388..4860442,4865156..4865396,4865489..4865597,4868511..4868676,4886879..4888779,4888872..4888998,4889405..4889508,4891257..4891318,4891590..4891671,4891756..4891942,4892108..4892292,4901816..4901986,4906140..4906566,4907943..4908145,4913773..4913943,4914088..4914214,4915352..4915473,4916592..4916706,4940798..4941183))
location: region:4850764-4941183:-1
so has part: feature:4940798-4941183:-1:exon
so has part: feature:4916592-4916706:-1:exon
so has part: feature:4915352-4915473:-1:exon
so has part: feature:4914088-4914214:-1:exon
so has part: feature:4913773-4913943:-1:exon
so has part: feature:4907943-4908145:-1:exon
so has part: feature:4906140-4906566:-1:exon
so has part: feature:4901816-4901986:-1:exon
so has part: feature:4892108-4892292:-1:exon
so has part: feature:4891756-4891942:-1:exon
so has part: feature:4891590-4891671:-1:exon
so has part: feature:4891257-4891318:-1:exon
so has part: feature:4889405-4889508:-1:exon
so has part: feature:4888872-4888998:-1:exon
so has part: feature:4886879-4888779:-1:exon
so has part: feature:4868511-4868676:-1:exon
so has part: feature:4865489-4865597:-1:exon
so has part: feature:4865156-4865396:-1:exon
so has part: feature:4860388-4860442:-1:exon
so has part: feature:4859264-4859311:-1:exon
so has part: feature:4857041-4857099:-1:exon
so has part: feature:4855268-4855395:-1:exon
so has part: feature:4852917-4852987:-1:exon
so has part: feature:4850764-4852147:-1:exon

position:4941183:-1
position: 4941183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4940798-4941183:-1:exon

position:4940798:-1
position: 4940798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4916592-4916706:-1:exon

position:4916592:-1
position: 4916592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4916706:-1
position: 4916706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4915352-4915473:-1:exon

position:4915352:-1
position: 4915352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4915473:-1
position: 4915473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4914088-4914214:-1:exon

position:4914088:-1
position: 4914088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4914214:-1
position: 4914214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4913773-4913943:-1:exon

position:4913773:-1
position: 4913773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4913943:-1
position: 4913943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4907943-4908145:-1:exon

position:4907943:-1
position: 4907943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4908145:-1
position: 4908145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4906140-4906566:-1:exon

position:4906140:-1
position: 4906140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4906566:-1
position: 4906566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4901816-4901986:-1:exon

position:4901816:-1
position: 4901816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4901986:-1
position: 4901986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4892108-4892292:-1:exon

position:4892108:-1
position: 4892108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4892292:-1
position: 4892292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4891756-4891942:-1:exon

position:4891756:-1
position: 4891756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4891942:-1
position: 4891942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4891590-4891671:-1:exon

position:4891590:-1
position: 4891590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4891671:-1
position: 4891671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4891257-4891318:-1:exon

position:4891257:-1
position: 4891257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4891318:-1
position: 4891318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4889405-4889508:-1:exon

position:4889405:-1
position: 4889405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4889508:-1
position: 4889508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4888872-4888998:-1:exon

position:4888872:-1
position: 4888872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4888998:-1
position: 4888998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4886879-4888779:-1:exon

position:4886879:-1
position: 4886879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4888779:-1
position: 4888779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4868511-4868676:-1:exon

position:4868511:-1
position: 4868511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4868676:-1
position: 4868676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4865489-4865597:-1:exon

position:4865489:-1
position: 4865489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4865597:-1
position: 4865597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4865156-4865396:-1:exon

position:4865156:-1
position: 4865156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4865396:-1
position: 4865396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4860388-4860442:-1:exon

position:4860388:-1
position: 4860388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4860442:-1
position: 4860442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4859264-4859311:-1:exon

position:4859264:-1
position: 4859264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4859311:-1
position: 4859311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4857041-4857099:-1:exon

position:4857041:-1
position: 4857041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4857099:-1
position: 4857099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4855268-4855395:-1:exon

position:4855268:-1
position: 4855268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4855395:-1
position: 4855395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4852917-4852987:-1:exon

position:4852917:-1
position: 4852917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4852987:-1
position: 4852987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:4850764-4852147:-1:exon

position:4852147:-1
position: 4852147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RB1CC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: RB1CC1
product: RB1 inducible coiled-coil 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_029923933.1
SIO_010081: RB1CC1
subclass of: SO_0000673
so part of: RB1CC1
location: complement(join(4850764..4852147,4852917..4852987,4855259..4855395,4857041..4857099,4859264..4859311,4860388..4860442,4865156..4865396,4865489..4865597,4868511..4868676,4886879..4888779,4888872..4888998,4889405..4889508,4891257..4891318,4891590..4891671,4891756..4891942,4892108..4892292,4901816..4901986,4906140..4906566,4907943..4908145,4913773..4913943,4914088..4914214,4915352..4915473,4916592..4916706,4940798..4941183))
location: region:4850764-4941183:-1
so has part: feature:4940798-4941183:-1:exon
so has part: feature:4916592-4916706:-1:exon
so has part: feature:4915352-4915473:-1:exon
so has part: feature:4914088-4914214:-1:exon
so has part: feature:4913773-4913943:-1:exon
so has part: feature:4907943-4908145:-1:exon
so has part: feature:4906140-4906566:-1:exon
so has part: feature:4901816-4901986:-1:exon
so has part: feature:4892108-4892292:-1:exon
so has part: feature:4891756-4891942:-1:exon
so has part: feature:4891590-4891671:-1:exon
so has part: feature:4891257-4891318:-1:exon
so has part: feature:4889405-4889508:-1:exon
so has part: feature:4888872-4888998:-1:exon
so has part: feature:4886879-4888779:-1:exon
so has part: feature:4868511-4868676:-1:exon
so has part: feature:4865489-4865597:-1:exon
so has part: feature:4865156-4865396:-1:exon
so has part: feature:4860388-4860442:-1:exon
so has part: feature:4859264-4859311:-1:exon
so has part: feature:4857041-4857099:-1:exon
so has part: feature:4855259-4855395:-1:exon
so has part: feature:4852917-4852987:-1:exon
so has part: feature:4850764-4852147:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4940798-4941183:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4916592-4916706:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4915352-4915473:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4914088-4914214:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4913773-4913943:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4907943-4908145:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4906140-4906566:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4901816-4901986:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4892108-4892292:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4891756-4891942:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4891590-4891671:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4891257-4891318:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4889405-4889508:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4888872-4888998:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4886879-4888779:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4868511-4868676:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4865489-4865597:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4865156-4865396:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4860388-4860442:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4859264-4859311:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4857041-4857099:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4855259-4855395:-1:exon

position:4855259:-1
position: 4855259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4852917-4852987:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4850764-4852147:-1:exon

RB1CC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: RB1CC1
product: RB1 inducible coiled-coil 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_029923934.1
SIO_010081: RB1CC1
subclass of: SO_0000673
so part of: RB1CC1
location: complement(join(4850764..4852147,4852917..4852981,4855268..4855395,4857041..4857099,4859264..4859311,4860388..4860442,4865156..4865396,4865489..4865597,4868511..4868691,4886879..4888779,4888872..4888998,4889405..4889508,4891257..4891318,4891590..4891671,4891756..4891942,4892108..4892292,4901816..4901986,4906140..4906566,4907943..4908145,4913773..4913943,4914088..4914214,4915352..4915473,4916592..4916706,4940798..4941183))
location: region:4850764-4941183:-1
so has part: feature:4940798-4941183:-1:exon
so has part: feature:4916592-4916706:-1:exon
so has part: feature:4915352-4915473:-1:exon
so has part: feature:4914088-4914214:-1:exon
so has part: feature:4913773-4913943:-1:exon
so has part: feature:4907943-4908145:-1:exon
so has part: feature:4906140-4906566:-1:exon
so has part: feature:4901816-4901986:-1:exon
so has part: feature:4892108-4892292:-1:exon
so has part: feature:4891756-4891942:-1:exon
so has part: feature:4891590-4891671:-1:exon
so has part: feature:4891257-4891318:-1:exon
so has part: feature:4889405-4889508:-1:exon
so has part: feature:4888872-4888998:-1:exon
so has part: feature:4886879-4888779:-1:exon
so has part: feature:4868511-4868691:-1:exon
so has part: feature:4865489-4865597:-1:exon
so has part: feature:4865156-4865396:-1:exon
so has part: feature:4860388-4860442:-1:exon
so has part: feature:4859264-4859311:-1:exon
so has part: feature:4857041-4857099:-1:exon
so has part: feature:4855268-4855395:-1:exon
so has part: feature:4852917-4852981:-1:exon
so has part: feature:4850764-4852147:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4940798-4941183:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4916592-4916706:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4915352-4915473:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4914088-4914214:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4913773-4913943:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4907943-4908145:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4906140-4906566:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4901816-4901986:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4892108-4892292:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4891756-4891942:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4891590-4891671:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4891257-4891318:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4889405-4889508:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4888872-4888998:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4886879-4888779:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4868511-4868691:-1:exon

position:4868691:-1
position: 4868691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4865489-4865597:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4865156-4865396:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4860388-4860442:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4859264-4859311:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4857041-4857099:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4855268-4855395:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4852917-4852981:-1:exon

position:4852981:-1
position: 4852981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:4850764-4852147:-1:exon

RB1CC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: RB1CC1
product: RB1 inducible coiled-coil 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_029923932.1
SIO_010081: RB1CC1
subclass of: SO_0000673
so part of: RB1CC1
location: complement(join(4850764..4852147,4852917..4852987,4855268..4855395,4857041..4857099,4859264..4859311,4860388..4860442,4865156..4865396,4865489..4865597,4868511..4868691,4886879..4888779,4888872..4888998,4889405..4889508,4891257..4891318,4891590..4891671,4891756..4891942,4892108..4892292,4901816..4901986,4906140..4906566,4907943..4908145,4913773..4913943,4914088..4914214,4915352..4915473,4916592..4916706,4940798..4941183))
location: region:4850764-4941183:-1
so has part: feature:4940798-4941183:-1:exon
so has part: feature:4916592-4916706:-1:exon
so has part: feature:4915352-4915473:-1:exon
so has part: feature:4914088-4914214:-1:exon
so has part: feature:4913773-4913943:-1:exon
so has part: feature:4907943-4908145:-1:exon
so has part: feature:4906140-4906566:-1:exon
so has part: feature:4901816-4901986:-1:exon
so has part: feature:4892108-4892292:-1:exon
so has part: feature:4891756-4891942:-1:exon
so has part: feature:4891590-4891671:-1:exon
so has part: feature:4891257-4891318:-1:exon
so has part: feature:4889405-4889508:-1:exon
so has part: feature:4888872-4888998:-1:exon
so has part: feature:4886879-4888779:-1:exon
so has part: feature:4868511-4868691:-1:exon
so has part: feature:4865489-4865597:-1:exon
so has part: feature:4865156-4865396:-1:exon
so has part: feature:4860388-4860442:-1:exon
so has part: feature:4859264-4859311:-1:exon
so has part: feature:4857041-4857099:-1:exon
so has part: feature:4855268-4855395:-1:exon
so has part: feature:4852917-4852987:-1:exon
so has part: feature:4850764-4852147:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4940798-4941183:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4916592-4916706:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4915352-4915473:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4914088-4914214:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4913773-4913943:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4907943-4908145:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4906140-4906566:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4901816-4901986:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4892108-4892292:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4891756-4891942:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4891590-4891671:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4891257-4891318:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4889405-4889508:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4888872-4888998:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4886879-4888779:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4868511-4868691:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4865489-4865597:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4865156-4865396:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4860388-4860442:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4859264-4859311:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4857041-4857099:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4855268-4855395:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4852917-4852987:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4850764-4852147:-1:exon

RB1CC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: RB1CC1
product: RB1 inducible coiled-coil 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_029923931.1
SIO_010081: RB1CC1
subclass of: SO_0000673
so part of: RB1CC1
location: complement(join(4850764..4852147,4852917..4852987,4855259..4855395,4857041..4857099,4859264..4859311,4860388..4860442,4865156..4865396,4865489..4865597,4868511..4868691,4886879..4888779,4888872..4888998,4889405..4889508,4891257..4891318,4891590..4891671,4891756..4891942,4892108..4892292,4901816..4901986,4906140..4906566,4907943..4908145,4913773..4913943,4914088..4914214,4915352..4915473,4916592..4916706,4940798..4941183))
location: region:4850764-4941183:-1
so has part: feature:4940798-4941183:-1:exon
so has part: feature:4916592-4916706:-1:exon
so has part: feature:4915352-4915473:-1:exon
so has part: feature:4914088-4914214:-1:exon
so has part: feature:4913773-4913943:-1:exon
so has part: feature:4907943-4908145:-1:exon
so has part: feature:4906140-4906566:-1:exon
so has part: feature:4901816-4901986:-1:exon
so has part: feature:4892108-4892292:-1:exon
so has part: feature:4891756-4891942:-1:exon
so has part: feature:4891590-4891671:-1:exon
so has part: feature:4891257-4891318:-1:exon
so has part: feature:4889405-4889508:-1:exon
so has part: feature:4888872-4888998:-1:exon
so has part: feature:4886879-4888779:-1:exon
so has part: feature:4868511-4868691:-1:exon
so has part: feature:4865489-4865597:-1:exon
so has part: feature:4865156-4865396:-1:exon
so has part: feature:4860388-4860442:-1:exon
so has part: feature:4859264-4859311:-1:exon
so has part: feature:4857041-4857099:-1:exon
so has part: feature:4855259-4855395:-1:exon
so has part: feature:4852917-4852987:-1:exon
so has part: feature:4850764-4852147:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4940798-4941183:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4916592-4916706:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4915352-4915473:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4914088-4914214:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4913773-4913943:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4907943-4908145:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4906140-4906566:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4901816-4901986:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4892108-4892292:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4891756-4891942:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4891590-4891671:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4891257-4891318:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4889405-4889508:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4888872-4888998:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4886879-4888779:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4868511-4868691:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4865489-4865597:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4865156-4865396:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4860388-4860442:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4859264-4859311:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4857041-4857099:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4855259-4855395:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4852917-4852987:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4850764-4852147:-1:exon

RB1CC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: RB1CC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RB1-inducible coiled-coil protein 1 isoform X5
translation: MKLYVFLVNTGTTLTFDTELAVQTVADLKHAIHSKYKIAIQHQVLVVNGGECMAADRRVCTYSAGTDTNPIFLFNKEMILCDRPPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQLAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSNYLQSIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLDSLPEYEGSEKAEMKTSTELVLSPDMPRTTNQSLLTSFHKSVEHIAPDTTEAESGKEVRESCQSTVQQDETSVDVKDGDLPFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIRPFIAECRQTIAKLDNQNMKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLMIMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLERVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKRLYEAEKSKRESFGKLFRKSFLRNRLFKGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPLLCDFEPLHQHVLALHNFVKAAQSLDEMSQTITDLLSEQKASTSQVSPPSASSPRTESAPGIATTTSPRTPPPLAVQDPLCPAVCPLEELSPDSIDAHTFDFETIPHPNIEQTIHQVSLDLDSLAESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTNVCGKEDSGGHASLNVQLEKCRVVAQDSHFSIQTIKEDLCHFRTFVQKEQCDFSNSLKCAALEIRSVIEKVKYSLEITLSEKHEKELQSLQSEYEDKLGALRQESEENENKIKKLKGDLARLEEVLQNKDNEFALVQHEKEAVICLQNEKDQKLLEMESLMRTQNCEISELKQSRAVALEDLRRLHVQSDERLQLLRTELQGLEQSRLRELEDTLHVRHSQEFEKARTDHRVSLERLKQENQQRIDQMQESHAAAIQEKEQQLQELKLKVSDLSDMRCKLEVELALKEAETDEIKILLEESRAQQKETLKSLLEHETEYLRTEISKLNQKIQDNNESYQVGLAELRTLMTIEKDQCISELISRHEEESDLLKAELNKVTSLHHQAFEIEKRLKEEMAGLQSKLDADLSALEKQKDEKLTQQEEKYEALIQKLEKDKEKLVVSQEQDREQLIQRLTCEKEAAIQTALTEFKLERDAVEKELLEKVKHLENQIAKSLAVESTREDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVRTSLIAEQQTNFNTVLTREKMRKENIINDLNDKLKSTMQQQERDKDLIESLSEDRARLLEEKKKLEEEVSKLRSGSFVPSPCVAAAPELCGACAPELPGDPERSALEPHEEGRADSAVETSMVSVRENIHMLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLPALDLRPASGASRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVSWNKKV
SIO_010081: RB1CC1
subclass of: SO_0000673
so part of: RB1CC1
location: complement(join(4852070..4852147,4852917..4852987,4855268..4855395,4857041..4857099,4859264..4859311,4860388..4860442,4865156..4865396,4865489..4865597,4868511..4868676,4886879..4888779,4888872..4888998,4889405..4889508,4891257..4891318,4891590..4891671,4891756..4891942,4892108..4892292,4901816..4901986,4906140..4906566,4907943..4908145,4913773..4913943,4914088..4914214,4915352..4915422))
location: region:4852070-4915422:-1
so has part: feature:4915352-4915422:-1:exon
so has part: feature:4914088-4914214:-1:exon
so has part: feature:4913773-4913943:-1:exon
so has part: feature:4907943-4908145:-1:exon
so has part: feature:4906140-4906566:-1:exon
so has part: feature:4901816-4901986:-1:exon
so has part: feature:4892108-4892292:-1:exon
so has part: feature:4891756-4891942:-1:exon
so has part: feature:4891590-4891671:-1:exon
so has part: feature:4891257-4891318:-1:exon
so has part: feature:4889405-4889508:-1:exon
so has part: feature:4888872-4888998:-1:exon
so has part: feature:4886879-4888779:-1:exon
so has part: feature:4868511-4868676:-1:exon
so has part: feature:4865489-4865597:-1:exon
so has part: feature:4865156-4865396:-1:exon
so has part: feature:4860388-4860442:-1:exon
so has part: feature:4859264-4859311:-1:exon
so has part: feature:4857041-4857099:-1:exon
so has part: feature:4855268-4855395:-1:exon
so has part: feature:4852917-4852987:-1:exon
so has part: feature:4852070-4852147:-1:exon

XP_029779795.1
type: Protein
SIO_000068: ncbiprotein

position:4852070:-1
position: 4852070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4915422:-1
position: 4915422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4915352-4915422:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4914088-4914214:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4913773-4913943:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4907943-4908145:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4906140-4906566:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4901816-4901986:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4892108-4892292:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4891756-4891942:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4891590-4891671:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4891257-4891318:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4889405-4889508:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4888872-4888998:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4886879-4888779:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4868511-4868676:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4865489-4865597:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4865156-4865396:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4860388-4860442:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4859264-4859311:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4857041-4857099:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4855268-4855395:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4852917-4852987:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4852070-4852147:-1:exon

RB1CC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: RB1CC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RB1-inducible coiled-coil protein 1 isoform X3
translation: MKLYVFLVNTGTTLTFDTELAVQTVADLKHAIHSKYKIAIQHQVLVVNGGECMAADRRVCTYSAGTDTNPIFLFNKEMILCDRPPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQLAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSNYLQSIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLDSLPEYEGSEKAEMKTSTELVLSPDMPRTTNQSLLTSFHKSVEHIAPDTTEAESGKEVRESCQSTVQQDETSVDVKDGDLPFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIRPFIAECRQTIAKLDNQNMKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLMIMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLERVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKRLYEAEKSKRESFGKLFRKSFLRNRLFKGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPLLCDFEPLHQHVLALHNFVKAAQSLDEMSQTITDLLSEQKASTSQVSPPSASSPRTESAPGIATTTSPRTPPPLAVQDPLCPAVCPLEELSPDSIDAHTFDFETIPHPNIEQTIHQVSLDLDSLAESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTNVCGKEDSGGHASLNVQLEKCRVVAQDSHFSIQTIKEDLCHFRTFVQKEQCDFSNSLKCAALEIRSVIEKVKYSLEITLSEKHEKELQSLQSEYEDKLGALRQESEENENKIKKLKGDLARLEEVLQNKDNEFALVQHEKEAVICLQNEKDQKLLEMESLMRTQNCEISELKQSRAVALEDLRRLHVQSDERLQLLRTELQGLEQSRLRELEDTLHVRHSQEFEKARTDHRVSLERLKQENQQRIDQMQESHAAAIQEKEQQLQELKLKVSDLSDMRCKLEVELALKEAETDEIKILLEESRAQQKETLKSLLEHETEYLRTEISKLNQKIQDNNESYQVGLAELRTLMTIEKDQCISELISRHEEESDLLKAELNKVTSLHHQAFEIEKRLKEEMAGLQSKLDADLSALEKQKDEKLTQQEEKYEALIQKLEKDKEKLVVSQEQDREQLIQRLTCEKEAAIQTALTEFKLERDAVEKELLEKVKHLENQIAKSLAVESTREDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVRTSLIAEQQTNFNTVLTREKMRKENIINDLNDKLKSTMQQQERDKDLIESLSEDRARLLEEKKKLEEEVSKLRSGSFVPSPCVAAAPELCGACAPELPGDPERSALEPHEEGRADSAVETSMVSVRENIHMLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLPALDLRPGEGASGASRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVSWNKKV
SIO_010081: RB1CC1
subclass of: SO_0000673
so part of: RB1CC1
location: complement(join(4852070..4852147,4852917..4852987,4855259..4855395,4857041..4857099,4859264..4859311,4860388..4860442,4865156..4865396,4865489..4865597,4868511..4868676,4886879..4888779,4888872..4888998,4889405..4889508,4891257..4891318,4891590..4891671,4891756..4891942,4892108..4892292,4901816..4901986,4906140..4906566,4907943..4908145,4913773..4913943,4914088..4914214,4915352..4915422))
location: region:4852070-4915422:-1
so has part: feature:4915352-4915422:-1:exon
so has part: feature:4914088-4914214:-1:exon
so has part: feature:4913773-4913943:-1:exon
so has part: feature:4907943-4908145:-1:exon
so has part: feature:4906140-4906566:-1:exon
so has part: feature:4901816-4901986:-1:exon
so has part: feature:4892108-4892292:-1:exon
so has part: feature:4891756-4891942:-1:exon
so has part: feature:4891590-4891671:-1:exon
so has part: feature:4891257-4891318:-1:exon
so has part: feature:4889405-4889508:-1:exon
so has part: feature:4888872-4888998:-1:exon
so has part: feature:4886879-4888779:-1:exon
so has part: feature:4868511-4868676:-1:exon
so has part: feature:4865489-4865597:-1:exon
so has part: feature:4865156-4865396:-1:exon
so has part: feature:4860388-4860442:-1:exon
so has part: feature:4859264-4859311:-1:exon
so has part: feature:4857041-4857099:-1:exon
so has part: feature:4855259-4855395:-1:exon
so has part: feature:4852917-4852987:-1:exon
so has part: feature:4852070-4852147:-1:exon

XP_029779793.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4915352-4915422:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4914088-4914214:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4913773-4913943:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4907943-4908145:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4906140-4906566:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4901816-4901986:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4892108-4892292:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4891756-4891942:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4891590-4891671:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4891257-4891318:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4889405-4889508:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4888872-4888998:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4886879-4888779:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4868511-4868676:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4865489-4865597:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4865156-4865396:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4860388-4860442:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4859264-4859311:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4857041-4857099:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4855259-4855395:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4852917-4852987:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4852070-4852147:-1:exon

RB1CC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: RB1CC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RB1-inducible coiled-coil protein 1 isoform X4
translation: MKLYVFLVNTGTTLTFDTELAVQTVADLKHAIHSKYKIAIQHQVLVVNGGECMAADRRVCTYSAGTDTNPIFLFNKEMILCDRPPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQLAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSNYLQSIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLDSLPEYEGSEKAEMKTSTELVLSPDMPRTTNQSLLTSFHKSVEHIAPDTTEAESGKEVRESCQSTVQQDETSVDVKDGDLPFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIRPFIAECRQTIAKLDNQNMKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLMIMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLERVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKRLYEAEKSKRESFGKLFRKSFLRNRLFKGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPLLCDFEPLHQHVLALHNFVKAAQSLDEMSQTITDLLSEQKASTSQVSPPSASSPRTESAPGIATTTSPRTPPPLAVQDPLCPAVCPLEELSPDSIDAHTFDFETIPHPNIEQTIHQVSLDLDSLAESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTNVCGKEDSGGHASLNVQLEKCRVVAQDSHFSIQTIKEDLCHFRTFVQKEQCDFSNSLKCAALEIRSVIEKVKYSLEITLSEKHEKELQSLQSEYEDKLGALRQESEENENKIKKLKGDLARLEEVLQNKDNEFALVQHEKEAVICLQNEKDQKLLEMESLMRTQNCEISELKQSRAVALEDLRRLHVQSDERLQLLRTELQGLEQSRLRELEDTLHVRHSQEFEKARTDHRVSLERLKQENQQRIDQMQESHAAAIQEKEQQLQELKLKVSDLSDMRCKLEVELALKEAETDEIKILLEESRAQQKETLKSLLEHETEYLRTEISKLNQKIQDNNESYQVGLAELRTLMTIEKDQCISELISRHEEESDLLKAELNKVTSLHHQAFEIEKRLKEEMAGLQSKLDADLSALEKQKDEKLTQQEEKYEALIQKLEKDKEKLVVSQEQDREQLIQRLTCEKEAAIQTALTEFKLERDAVEKELLEKVKHLENQIAKSALYSSLAVESTREDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVRTSLIAEQQTNFNTVLTREKMRKENIINDLNDKLKSTMQQQERDKDLIESLSEDRARLLEEKKKLEEEVSKLRSGSFVPSPCVAAAPELCGACAPELPGDPERSALEPHEEGRADSAVETSMVSVRENIHMLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLPALDLRPGASRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVSWNKKV
SIO_010081: RB1CC1
subclass of: SO_0000673
so part of: RB1CC1
location: complement(join(4852070..4852147,4852917..4852981,4855268..4855395,4857041..4857099,4859264..4859311,4860388..4860442,4865156..4865396,4865489..4865597,4868511..4868691,4886879..4888779,4888872..4888998,4889405..4889508,4891257..4891318,4891590..4891671,4891756..4891942,4892108..4892292,4901816..4901986,4906140..4906566,4907943..4908145,4913773..4913943,4914088..4914214,4915352..4915422))
location: region:4852070-4915422:-1
so has part: feature:4915352-4915422:-1:exon
so has part: feature:4914088-4914214:-1:exon
so has part: feature:4913773-4913943:-1:exon
so has part: feature:4907943-4908145:-1:exon
so has part: feature:4906140-4906566:-1:exon
so has part: feature:4901816-4901986:-1:exon
so has part: feature:4892108-4892292:-1:exon
so has part: feature:4891756-4891942:-1:exon
so has part: feature:4891590-4891671:-1:exon
so has part: feature:4891257-4891318:-1:exon
so has part: feature:4889405-4889508:-1:exon
so has part: feature:4888872-4888998:-1:exon
so has part: feature:4886879-4888779:-1:exon
so has part: feature:4868511-4868691:-1:exon
so has part: feature:4865489-4865597:-1:exon
so has part: feature:4865156-4865396:-1:exon
so has part: feature:4860388-4860442:-1:exon
so has part: feature:4859264-4859311:-1:exon
so has part: feature:4857041-4857099:-1:exon
so has part: feature:4855268-4855395:-1:exon
so has part: feature:4852917-4852981:-1:exon
so has part: feature:4852070-4852147:-1:exon

XP_029779794.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4915352-4915422:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4914088-4914214:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4913773-4913943:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4907943-4908145:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4906140-4906566:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4901816-4901986:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4892108-4892292:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4891756-4891942:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4891590-4891671:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4891257-4891318:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4889405-4889508:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4888872-4888998:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4886879-4888779:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4868511-4868691:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4865489-4865597:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4865156-4865396:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4860388-4860442:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4859264-4859311:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4857041-4857099:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4855268-4855395:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4852917-4852981:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4852070-4852147:-1:exon

RB1CC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: RB1CC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RB1-inducible coiled-coil protein 1 isoform X2
translation: MKLYVFLVNTGTTLTFDTELAVQTVADLKHAIHSKYKIAIQHQVLVVNGGECMAADRRVCTYSAGTDTNPIFLFNKEMILCDRPPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQLAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSNYLQSIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLDSLPEYEGSEKAEMKTSTELVLSPDMPRTTNQSLLTSFHKSVEHIAPDTTEAESGKEVRESCQSTVQQDETSVDVKDGDLPFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIRPFIAECRQTIAKLDNQNMKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLMIMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLERVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKRLYEAEKSKRESFGKLFRKSFLRNRLFKGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPLLCDFEPLHQHVLALHNFVKAAQSLDEMSQTITDLLSEQKASTSQVSPPSASSPRTESAPGIATTTSPRTPPPLAVQDPLCPAVCPLEELSPDSIDAHTFDFETIPHPNIEQTIHQVSLDLDSLAESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTNVCGKEDSGGHASLNVQLEKCRVVAQDSHFSIQTIKEDLCHFRTFVQKEQCDFSNSLKCAALEIRSVIEKVKYSLEITLSEKHEKELQSLQSEYEDKLGALRQESEENENKIKKLKGDLARLEEVLQNKDNEFALVQHEKEAVICLQNEKDQKLLEMESLMRTQNCEISELKQSRAVALEDLRRLHVQSDERLQLLRTELQGLEQSRLRELEDTLHVRHSQEFEKARTDHRVSLERLKQENQQRIDQMQESHAAAIQEKEQQLQELKLKVSDLSDMRCKLEVELALKEAETDEIKILLEESRAQQKETLKSLLEHETEYLRTEISKLNQKIQDNNESYQVGLAELRTLMTIEKDQCISELISRHEEESDLLKAELNKVTSLHHQAFEIEKRLKEEMAGLQSKLDADLSALEKQKDEKLTQQEEKYEALIQKLEKDKEKLVVSQEQDREQLIQRLTCEKEAAIQTALTEFKLERDAVEKELLEKVKHLENQIAKSALYSSLAVESTREDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVRTSLIAEQQTNFNTVLTREKMRKENIINDLNDKLKSTMQQQERDKDLIESLSEDRARLLEEKKKLEEEVSKLRSGSFVPSPCVAAAPELCGACAPELPGDPERSALEPHEEGRADSAVETSMVSVRENIHMLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLPALDLRPASGASRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVSWNKKV
SIO_010081: RB1CC1
subclass of: SO_0000673
so part of: RB1CC1
location: complement(join(4852070..4852147,4852917..4852987,4855268..4855395,4857041..4857099,4859264..4859311,4860388..4860442,4865156..4865396,4865489..4865597,4868511..4868691,4886879..4888779,4888872..4888998,4889405..4889508,4891257..4891318,4891590..4891671,4891756..4891942,4892108..4892292,4901816..4901986,4906140..4906566,4907943..4908145,4913773..4913943,4914088..4914214,4915352..4915422))
location: region:4852070-4915422:-1
so has part: feature:4915352-4915422:-1:exon
so has part: feature:4914088-4914214:-1:exon
so has part: feature:4913773-4913943:-1:exon
so has part: feature:4907943-4908145:-1:exon
so has part: feature:4906140-4906566:-1:exon
so has part: feature:4901816-4901986:-1:exon
so has part: feature:4892108-4892292:-1:exon
so has part: feature:4891756-4891942:-1:exon
so has part: feature:4891590-4891671:-1:exon
so has part: feature:4891257-4891318:-1:exon
so has part: feature:4889405-4889508:-1:exon
so has part: feature:4888872-4888998:-1:exon
so has part: feature:4886879-4888779:-1:exon
so has part: feature:4868511-4868691:-1:exon
so has part: feature:4865489-4865597:-1:exon
so has part: feature:4865156-4865396:-1:exon
so has part: feature:4860388-4860442:-1:exon
so has part: feature:4859264-4859311:-1:exon
so has part: feature:4857041-4857099:-1:exon
so has part: feature:4855268-4855395:-1:exon
so has part: feature:4852917-4852987:-1:exon
so has part: feature:4852070-4852147:-1:exon

XP_029779792.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4915352-4915422:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4914088-4914214:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4913773-4913943:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4907943-4908145:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4906140-4906566:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4901816-4901986:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4892108-4892292:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4891756-4891942:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4891590-4891671:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4891257-4891318:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4889405-4889508:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4888872-4888998:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4886879-4888779:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4868511-4868691:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4865489-4865597:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4865156-4865396:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4860388-4860442:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4859264-4859311:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4857041-4857099:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4855268-4855395:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4852917-4852987:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4852070-4852147:-1:exon

RB1CC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: RB1CC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RB1-inducible coiled-coil protein 1 isoform X1
translation: MKLYVFLVNTGTTLTFDTELAVQTVADLKHAIHSKYKIAIQHQVLVVNGGECMAADRRVCTYSAGTDTNPIFLFNKEMILCDRPPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQLAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSNYLQSIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLDSLPEYEGSEKAEMKTSTELVLSPDMPRTTNQSLLTSFHKSVEHIAPDTTEAESGKEVRESCQSTVQQDETSVDVKDGDLPFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIRPFIAECRQTIAKLDNQNMKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLMIMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLERVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKRLYEAEKSKRESFGKLFRKSFLRNRLFKGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPLLCDFEPLHQHVLALHNFVKAAQSLDEMSQTITDLLSEQKASTSQVSPPSASSPRTESAPGIATTTSPRTPPPLAVQDPLCPAVCPLEELSPDSIDAHTFDFETIPHPNIEQTIHQVSLDLDSLAESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTNVCGKEDSGGHASLNVQLEKCRVVAQDSHFSIQTIKEDLCHFRTFVQKEQCDFSNSLKCAALEIRSVIEKVKYSLEITLSEKHEKELQSLQSEYEDKLGALRQESEENENKIKKLKGDLARLEEVLQNKDNEFALVQHEKEAVICLQNEKDQKLLEMESLMRTQNCEISELKQSRAVALEDLRRLHVQSDERLQLLRTELQGLEQSRLRELEDTLHVRHSQEFEKARTDHRVSLERLKQENQQRIDQMQESHAAAIQEKEQQLQELKLKVSDLSDMRCKLEVELALKEAETDEIKILLEESRAQQKETLKSLLEHETEYLRTEISKLNQKIQDNNESYQVGLAELRTLMTIEKDQCISELISRHEEESDLLKAELNKVTSLHHQAFEIEKRLKEEMAGLQSKLDADLSALEKQKDEKLTQQEEKYEALIQKLEKDKEKLVVSQEQDREQLIQRLTCEKEAAIQTALTEFKLERDAVEKELLEKVKHLENQIAKSALYSSLAVESTREDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVRTSLIAEQQTNFNTVLTREKMRKENIINDLNDKLKSTMQQQERDKDLIESLSEDRARLLEEKKKLEEEVSKLRSGSFVPSPCVAAAPELCGACAPELPGDPERSALEPHEEGRADSAVETSMVSVRENIHMLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLPALDLRPGEGASGASRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVSWNKKV
SIO_010081: RB1CC1
subclass of: SO_0000673
so part of: RB1CC1
location: complement(join(4852070..4852147,4852917..4852987,4855259..4855395,4857041..4857099,4859264..4859311,4860388..4860442,4865156..4865396,4865489..4865597,4868511..4868691,4886879..4888779,4888872..4888998,4889405..4889508,4891257..4891318,4891590..4891671,4891756..4891942,4892108..4892292,4901816..4901986,4906140..4906566,4907943..4908145,4913773..4913943,4914088..4914214,4915352..4915422))
location: region:4852070-4915422:-1
so has part: feature:4915352-4915422:-1:exon
so has part: feature:4914088-4914214:-1:exon
so has part: feature:4913773-4913943:-1:exon
so has part: feature:4907943-4908145:-1:exon
so has part: feature:4906140-4906566:-1:exon
so has part: feature:4901816-4901986:-1:exon
so has part: feature:4892108-4892292:-1:exon
so has part: feature:4891756-4891942:-1:exon
so has part: feature:4891590-4891671:-1:exon
so has part: feature:4891257-4891318:-1:exon
so has part: feature:4889405-4889508:-1:exon
so has part: feature:4888872-4888998:-1:exon
so has part: feature:4886879-4888779:-1:exon
so has part: feature:4868511-4868691:-1:exon
so has part: feature:4865489-4865597:-1:exon
so has part: feature:4865156-4865396:-1:exon
so has part: feature:4860388-4860442:-1:exon
so has part: feature:4859264-4859311:-1:exon
so has part: feature:4857041-4857099:-1:exon
so has part: feature:4855259-4855395:-1:exon
so has part: feature:4852917-4852987:-1:exon
so has part: feature:4852070-4852147:-1:exon

XP_029779791.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4915352-4915422:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4914088-4914214:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4913773-4913943:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4907943-4908145:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4906140-4906566:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4901816-4901986:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4892108-4892292:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4891756-4891942:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4891590-4891671:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4891257-4891318:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4889405-4889508:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4888872-4888998:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4886879-4888779:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4868511-4868691:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4865489-4865597:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4865156-4865396:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4860388-4860442:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4859264-4859311:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4857041-4857099:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4855259-4855395:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4852917-4852987:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4852070-4852147:-1:exon

RB1CC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: RB1CC1
product: RB1 inducible coiled-coil 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_029923936.1
SIO_010081: RB1CC1
subclass of: SO_0000673
so part of: RB1CC1
location: complement(join(4881006..4881320,4886879..4888779,4888872..4888998,4889405..4889508,4891257..4891318,4891590..4891671,4891756..4891942,4892108..4892292,4901816..4901986,4906140..4906566,4907943..4908145,4913773..4913943,4914088..4914214,4915352..4915473,4916592..4916706,4940798..4941184))
location: region:4881006-4941184:-1
so has part: feature:4940798-4941184:-1:exon
so has part: feature:4916592-4916706:-1:exon
so has part: feature:4915352-4915473:-1:exon
so has part: feature:4914088-4914214:-1:exon
so has part: feature:4913773-4913943:-1:exon
so has part: feature:4907943-4908145:-1:exon
so has part: feature:4906140-4906566:-1:exon
so has part: feature:4901816-4901986:-1:exon
so has part: feature:4892108-4892292:-1:exon
so has part: feature:4891756-4891942:-1:exon
so has part: feature:4891590-4891671:-1:exon
so has part: feature:4891257-4891318:-1:exon
so has part: feature:4889405-4889508:-1:exon
so has part: feature:4888872-4888998:-1:exon
so has part: feature:4886879-4888779:-1:exon
so has part: feature:4881006-4881320:-1:exon

position:4881006:-1
position: 4881006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4940798-4941184:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4916592-4916706:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4915352-4915473:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4914088-4914214:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4913773-4913943:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4907943-4908145:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4906140-4906566:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4901816-4901986:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4892108-4892292:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4891756-4891942:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4891590-4891671:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4891257-4891318:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4889405-4889508:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4888872-4888998:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4886879-4888779:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4881006-4881320:-1:exon

position:4881320:-1
position: 4881320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RB1CC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: RB1CC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RB1-inducible coiled-coil protein 1 isoform X6
translation: MKLYVFLVNTGTTLTFDTELAVQTVADLKHAIHSKYKIAIQHQVLVVNGGECMAADRRVCTYSAGTDTNPIFLFNKEMILCDRPPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQLAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSNYLQSIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLDSLPEYEGSEKAEMKTSTELVLSPDMPRTTNQSLLTSFHKSVEHIAPDTTEAESGKEVRESCQSTVQQDETSVDVKDGDLPFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIRPFIAECRQTIAKLDNQNMKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLMIMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLERVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKRLYEAEKSKRESFGKLFRKSFLRNRLFKGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPLLCDFEPLHQHVLALHNFVKAAQSLDEMSQTITDLLSEQKASTSQVSPPSASSPRTESAPGIATTTSPRTPPPLAVQDPLCPAVCPLEELSPDSIDAHTFDFETIPHPNIEQTIHQVSLDLDSLAESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTNVCGKEDSGGHASLNVQLEKCRVVAQDSHFSIQTIKEDLCHFRTFVQKEQCDFSNSLKCAALEIRSVIEKVKYSLEITLSEKHEKELQSLQSEYEDKLGALRQESEENENKIKKLKGDLARLEEVLQNKDNEFALVQHEKEAVICLQNEKDQKLLEMESLMRTQNCEISELKQSRAVALEDLRRLHVQSDERLQLLRTELQGLEQSRLRELEDTLHVRHSQEFEKARTDHRVSLERLKQENQQRIDQMQESHAAAIQEKEQQLQELKLKVSDLSDMRCKLEVELALKEAETDEIKILLEESRAQQKETLKSLLEHETEYLRTEISKLNQKIQDNNESYQVGLAELRTLMTIEKDQCISELISRHEEESDLLKAELNKVTSLHHQAFEIEKRLKEEMAGLQSKLDADLSALEKQKDEKLTQQEEKYEALIQKLEKDKEKLVVSQEQDREQLIQRLTCEKEAAIQTALTEFKLERDAVEKELLEKVKHLENQIAKSPVDSQHQRFFSGSDLPIASLALLPVTAPPRGSG
SIO_010081: RB1CC1
subclass of: SO_0000673
so part of: RB1CC1
location: complement(join(4881218..4881320,4886879..4888779,4888872..4888998,4889405..4889508,4891257..4891318,4891590..4891671,4891756..4891942,4892108..4892292,4901816..4901986,4906140..4906566,4907943..4908145,4913773..4913943,4914088..4914214,4915352..4915422))
location: region:4881218-4915422:-1
so has part: feature:4915352-4915422:-1:exon
so has part: feature:4914088-4914214:-1:exon
so has part: feature:4913773-4913943:-1:exon
so has part: feature:4907943-4908145:-1:exon
so has part: feature:4906140-4906566:-1:exon
so has part: feature:4901816-4901986:-1:exon
so has part: feature:4892108-4892292:-1:exon
so has part: feature:4891756-4891942:-1:exon
so has part: feature:4891590-4891671:-1:exon
so has part: feature:4891257-4891318:-1:exon
so has part: feature:4889405-4889508:-1:exon
so has part: feature:4888872-4888998:-1:exon
so has part: feature:4886879-4888779:-1:exon
so has part: feature:4881218-4881320:-1:exon

XP_029779796.1
type: Protein
SIO_000068: ncbiprotein

position:4881218:-1
position: 4881218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4915352-4915422:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4914088-4914214:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4913773-4913943:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4907943-4908145:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4906140-4906566:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4901816-4901986:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4892108-4892292:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4891756-4891942:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4891590-4891671:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4891257-4891318:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4889405-4889508:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4888872-4888998:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4886879-4888779:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4881218-4881320:-1:exon

RB1CC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: RB1CC1
product: RB1 inducible coiled-coil 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_029923937.1
SIO_010081: RB1CC1
subclass of: SO_0000673
so part of: RB1CC1
location: complement(join(4881915..4882083,4886879..4888779,4888872..4888998,4889405..4889508,4891257..4891318,4891590..4891671,4891756..4891942,4892108..4892292,4901816..4901986,4906140..4906566,4907943..4908145,4913773..4913943,4914088..4914214,4915352..4915473,4916592..4916706,4940798..4941184))
location: region:4881915-4941184:-1
so has part: feature:4940798-4941184:-1:exon
so has part: feature:4916592-4916706:-1:exon
so has part: feature:4915352-4915473:-1:exon
so has part: feature:4914088-4914214:-1:exon
so has part: feature:4913773-4913943:-1:exon
so has part: feature:4907943-4908145:-1:exon
so has part: feature:4906140-4906566:-1:exon
so has part: feature:4901816-4901986:-1:exon
so has part: feature:4892108-4892292:-1:exon
so has part: feature:4891756-4891942:-1:exon
so has part: feature:4891590-4891671:-1:exon
so has part: feature:4891257-4891318:-1:exon
so has part: feature:4889405-4889508:-1:exon
so has part: feature:4888872-4888998:-1:exon
so has part: feature:4886879-4888779:-1:exon
so has part: feature:4881915-4882083:-1:exon

position:4881915:-1
position: 4881915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4940798-4941184:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4916592-4916706:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4915352-4915473:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4914088-4914214:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4913773-4913943:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4907943-4908145:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4906140-4906566:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4901816-4901986:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4892108-4892292:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4891756-4891942:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4891590-4891671:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4891257-4891318:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4889405-4889508:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4888872-4888998:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4886879-4888779:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4881915-4882083:-1:exon

position:4882083:-1
position: 4882083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RB1CC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: RB1CC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RB1-inducible coiled-coil protein 1 isoform X7
translation: MKLYVFLVNTGTTLTFDTELAVQTVADLKHAIHSKYKIAIQHQVLVVNGGECMAADRRVCTYSAGTDTNPIFLFNKEMILCDRPPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQLAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSNYLQSIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLDSLPEYEGSEKAEMKTSTELVLSPDMPRTTNQSLLTSFHKSVEHIAPDTTEAESGKEVRESCQSTVQQDETSVDVKDGDLPFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIRPFIAECRQTIAKLDNQNMKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLMIMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLERVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKRLYEAEKSKRESFGKLFRKSFLRNRLFKGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPLLCDFEPLHQHVLALHNFVKAAQSLDEMSQTITDLLSEQKASTSQVSPPSASSPRTESAPGIATTTSPRTPPPLAVQDPLCPAVCPLEELSPDSIDAHTFDFETIPHPNIEQTIHQVSLDLDSLAESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTNVCGKEDSGGHASLNVQLEKCRVVAQDSHFSIQTIKEDLCHFRTFVQKEQCDFSNSLKCAALEIRSVIEKVKYSLEITLSEKHEKELQSLQSEYEDKLGALRQESEENENKIKKLKGDLARLEEVLQNKDNEFALVQHEKEAVICLQNEKDQKLLEMESLMRTQNCEISELKQSRAVALEDLRRLHVQSDERLQLLRTELQGLEQSRLRELEDTLHVRHSQEFEKARTDHRVSLERLKQENQQRIDQMQESHAAAIQEKEQQLQELKLKVSDLSDMRCKLEVELALKEAETDEIKILLEESRAQQKETLKSLLEHETEYLRTEISKLNQKIQDNNESYQVGLAELRTLMTIEKDQCISELISRHEEESDLLKAELNKVTSLHHQAFEIEKRLKEEMAGLQSKLDADLSALEKQKDEKLTQQEEKYEALIQKLEKDKEKLVVSQEQDREQLIQRLTCEKEAAIQTALTEFKLERDAVEKELLEKVKHLENQIAKRSGQPWCILRATKRGKKPLSQQPRVWWQRPC
SIO_010081: RB1CC1
subclass of: SO_0000673
so part of: RB1CC1
location: complement(join(4881990..4882083,4886879..4888779,4888872..4888998,4889405..4889508,4891257..4891318,4891590..4891671,4891756..4891942,4892108..4892292,4901816..4901986,4906140..4906566,4907943..4908145,4913773..4913943,4914088..4914214,4915352..4915422))
location: region:4881990-4915422:-1
so has part: feature:4915352-4915422:-1:exon
so has part: feature:4914088-4914214:-1:exon
so has part: feature:4913773-4913943:-1:exon
so has part: feature:4907943-4908145:-1:exon
so has part: feature:4906140-4906566:-1:exon
so has part: feature:4901816-4901986:-1:exon
so has part: feature:4892108-4892292:-1:exon
so has part: feature:4891756-4891942:-1:exon
so has part: feature:4891590-4891671:-1:exon
so has part: feature:4891257-4891318:-1:exon
so has part: feature:4889405-4889508:-1:exon
so has part: feature:4888872-4888998:-1:exon
so has part: feature:4886879-4888779:-1:exon
so has part: feature:4881990-4882083:-1:exon

XP_029779797.1
type: Protein
SIO_000068: ncbiprotein

position:4881990:-1
position: 4881990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4915352-4915422:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4914088-4914214:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4913773-4913943:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4907943-4908145:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4906140-4906566:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4901816-4901986:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4892108-4892292:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4891756-4891942:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4891590-4891671:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4891257-4891318:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4889405-4889508:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4888872-4888998:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4886879-4888779:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4881990-4882083:-1:exon

LOC115279377
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115279377
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4931767..4932676
location: region:4931767-4932676:1
so has part: feature:4931767-4932676:1:exon

115279377
type: Gene
SIO_000068: ncbigene

position:4931767:1
position: 4931767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4932676:1
position: 4932676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4931767-4932676:1:exon

LOC115279377
type: Exon
subclass of: SO_0000147
RO_0002162: 37032
gene: LOC115279377
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 57% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC115279377
subclass of: SO_0000673
so part of: LOC115279377
location: 4931767..4932676
location: region:4931767-4932676:1
so has part: feature:4931767-4932676:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4931767-4932676:1:exon

LOC115279379
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115279379
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4941254..4948908
location: region:4941254-4948908:1
so has part: feature:4941254-4948908:1:exon
subclass of: SO_0000011

115279379
type: Gene
SIO_000068: ncbigene

position:4941254:1
position: 4941254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4948908:1
position: 4948908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4941254-4948908:1:exon

LOC115279379
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115279379
product: uncharacterized LOC115279379
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XR_003903395.1
SIO_010081: LOC115279379
subclass of: SO_0000673
so part of: LOC115279379
location: join(4941254..4941652,4948635..4948908)
location: region:4941254-4948908:1
so has part: feature:4941254-4941652:1:exon
so has part: feature:4948635-4948908:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4941254-4941652:1:exon

position:4941652:1
position: 4941652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4948635-4948908:1:exon

position:4948635:1
position: 4948635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115279421
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115279421
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4993257..5033841)
location: region:4993257-5033841:-1
so has part: feature:4993257-5033841:-1:exon
subclass of: SO_0000011

115279421
type: Gene
SIO_000068: ncbigene

position:4993257:-1
position: 4993257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5033841:-1
position: 5033841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4993257-5033841:-1:exon

LOC115279421
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115279421
product: uncharacterized LOC115279421
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003903438.1
SIO_010081: LOC115279421
subclass of: SO_0000673
so part of: LOC115279421
location: complement(join(4993257..4993451,4993864..4994046,5033499..5033841))
location: region:4993257-5033841:-1
so has part: feature:5033499-5033841:-1:exon
so has part: feature:4993864-4994046:-1:exon
so has part: feature:4993257-4993451:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5033499-5033841:-1:exon

position:5033499:-1
position: 5033499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4993864-4994046:-1:exon

position:4993864:-1
position: 4993864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4994046:-1
position: 4994046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4993257-4993451:-1:exon

position:4993451:-1
position: 4993451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115279422
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115279422
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4993845..5019616
location: region:4993845-5019616:1
so has part: feature:4993845-5019616:1:exon
subclass of: SO_0000011

115279422
type: Gene
SIO_000068: ncbigene

position:4993845:1
position: 4993845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5019616:1
position: 5019616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4993845-5019616:1:exon

LOC115279422
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115279422
product: uncharacterized LOC115279422
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003903439.1
SIO_010081: LOC115279422
subclass of: SO_0000673
so part of: LOC115279422
location: join(4993845..4993944,4995042..4995232,5013797..5013980,5019115..5019616)
location: region:4993845-5019616:1
so has part: feature:4993845-4993944:1:exon
so has part: feature:4995042-4995232:1:exon
so has part: feature:5013797-5013980:1:exon
so has part: feature:5019115-5019616:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4993845-4993944:1:exon

position:4993944:1
position: 4993944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4995042-4995232:1:exon

position:4995042:1
position: 4995042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4995232:1
position: 4995232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5013797-5013980:1:exon

position:5013797:1
position: 5013797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5013980:1
position: 5013980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5019115-5019616:1:exon

position:5019115:1
position: 5019115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115279420
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115279420
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(5001313..5002439)
location: region:5001313-5002439:-1
so has part: feature:5001313-5002439:-1:exon

115279420
type: Gene
SIO_000068: ncbigene

position:5001313:-1
position: 5001313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5002439:-1
position: 5002439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5001313-5002439:-1:exon

LOC115279420
type: Exon
subclass of: SO_0000147
RO_0002162: 37032
gene: LOC115279420
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC115279420
subclass of: SO_0000673
so part of: LOC115279420
location: complement(5001313..5002439)
location: region:5001313-5002439:-1
so has part: feature:5001313-5002439:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5001313-5002439:-1:exon

LOC115279507
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115279507
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5034065..5035897
location: region:5034065-5035897:1
so has part: feature:5034065-5035897:1:exon
subclass of: SO_0000011

115279507
type: Gene
SIO_000068: ncbigene

position:5034065:1
position: 5034065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5035897:1
position: 5035897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5034065-5035897:1:exon

LOC115279507
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115279507
product: uncharacterized LOC115279507
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003903475.1
SIO_010081: LOC115279507
subclass of: SO_0000673
so part of: LOC115279507
location: join(5034065..5034195,5035594..5035897)
location: region:5034065-5035897:1
so has part: feature:5034065-5034195:1:exon
so has part: feature:5035594-5035897:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5034065-5034195:1:exon

position:5034195:1
position: 5034195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5035594-5035897:1:exon

position:5035594:1
position: 5035594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115279354
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115279354
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5047538..5048201
location: region:5047538-5048201:1
so has part: feature:5047538-5048201:1:exon
subclass of: SO_0000011

115279354
type: Gene
SIO_000068: ncbigene

position:5047538:1
position: 5047538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5048201:1
position: 5048201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5047538-5048201:1:exon

LOC115279354
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115279354
product: uncharacterized LOC115279354
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003903385.1
SIO_010081: LOC115279354
subclass of: SO_0000673
so part of: LOC115279354
location: join(5047538..5047827,5047868..5048201)
location: region:5047538-5048201:1
so has part: feature:5047538-5047827:1:exon
so has part: feature:5047868-5048201:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5047538-5047827:1:exon

position:5047827:1
position: 5047827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5047868-5048201:1:exon

position:5047868:1
position: 5047868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115279353
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115279353
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5052664..5060390)
location: region:5052664-5060390:-1
so has part: feature:5052664-5060390:-1:exon
subclass of: SO_0000011

115279353
type: Gene
SIO_000068: ncbigene

position:5052664:-1
position: 5052664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5060390:-1
position: 5060390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5052664-5060390:-1:exon

LOC115279353
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115279353
product: uncharacterized LOC115279353
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003903384.1
SIO_010081: LOC115279353
subclass of: SO_0000673
so part of: LOC115279353
location: complement(join(5052664..5053066,5060260..5060390))
location: region:5052664-5060390:-1
so has part: feature:5060260-5060390:-1:exon
so has part: feature:5052664-5053066:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5060260-5060390:-1:exon

position:5060260:-1
position: 5060260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5052664-5053066:-1:exon

position:5053066:-1
position: 5053066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115279579
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115279579
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(5057006..5057147)
location: region:5057006-5057147:-1
so has part: feature:5057006-5057147:-1:exon

115279579
type: Gene
SIO_000068: ncbigene

position:5057006:-1
position: 5057006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5057147:-1
position: 5057147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5057006-5057147:-1:exon

LOC115279579
type: Exon
subclass of: SO_0000147
RO_0002162: 37032
gene: LOC115279579
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC115279579
subclass of: SO_0000673
so part of: LOC115279579
location: complement(5057006..5057147)
location: region:5057006-5057147:-1
so has part: feature:5057006-5057147:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5057006-5057147:-1:exon

LOC115279474
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115279474
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5113918..5115375)
location: region:5113918-5115375:-1
so has part: feature:5113918-5115375:-1:exon
subclass of: SO_0000011

115279474
type: Gene
SIO_000068: ncbigene

position:5113918:-1
position: 5113918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5115375:-1
position: 5115375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5113918-5115375:-1:exon

LOC115279474
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115279474
product: uncharacterized LOC115279474
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003903457.1
SIO_010081: LOC115279474
subclass of: SO_0000673
so part of: LOC115279474
location: complement(join(5113918..5114115,5114540..5114651,5115116..5115375))
location: region:5113918-5115375:-1
so has part: feature:5115116-5115375:-1:exon
so has part: feature:5114540-5114651:-1:exon
so has part: feature:5113918-5114115:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5115116-5115375:-1:exon

position:5115116:-1
position: 5115116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5114540-5114651:-1:exon

position:5114540:-1
position: 5114540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5114651:-1
position: 5114651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5113918-5114115:-1:exon

position:5114115:-1
position: 5114115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115279476
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115279476
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5115529..5141543)
location: region:5115529-5141543:-1
so has part: feature:5115529-5141543:-1:exon
subclass of: SO_0000011

115279476
type: Gene
SIO_000068: ncbigene

position:5115529:-1
position: 5115529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5141543:-1
position: 5141543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5115529-5141543:-1:exon

LOC115279476
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115279476
product: uncharacterized LOC115279476
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003903459.1
SIO_010081: LOC115279476
subclass of: SO_0000673
so part of: LOC115279476
location: complement(join(5115529..5115812,5141437..5141543))
location: region:5115529-5141543:-1
so has part: feature:5141437-5141543:-1:exon
so has part: feature:5115529-5115812:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5141437-5141543:-1:exon

position:5141437:-1
position: 5141437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5115529-5115812:-1:exon

position:5115812:-1
position: 5115812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NPBWR1
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: NPBWR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5128830..5129821
location: region:5128830-5129821:1
so has part: feature:5128830-5129821:1:exon
subclass of: SO_0000010

115279473
type: Gene
SIO_000068: ncbigene

position:5128830:1
position: 5128830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5129821:1
position: 5129821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5128830-5129821:1:exon

NPBWR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: NPBWR1
product: neuropeptides B and W receptor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 43% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029924015.1
SIO_010081: NPBWR1
subclass of: SO_0000673
so part of: NPBWR1
location: 5128830..5129821
location: region:5128830-5129821:1
so has part: feature:5128830-5129821:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5128830-5129821:1:exon

NPBWR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: NPBWR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuropeptides B/W receptor type 1
translation: MLNESFLELGTANASCPGPALGCPNASGLPPPLPPPLAVAVPVVYAVICAVGLAGNSAVLYVLLRAPRMKTVTNLFILNLAIADELFTLVLPINIADFLLQRWPFGELMCKLIVAIDQYNTFSSLYFLTVMSADRYLVVLATAESRRVAGRTYRAARAVSLAVWGLVTLVVLPFAVFARLDDEQGRRQCVLVFPQPEAFWWRASRLYTLVLGFAIPVSTICVLYGILLCRLRAMRLDSHAKALDRAKKRVTLLVVVILAVCLLCWTPYHLSTVVALTTDLPQTPLVIAVSYFITSLSYANSCLNPFLYAFLDDSFRRSLRQLLACRAAA
SIO_010081: NPBWR1
subclass of: SO_0000673
so part of: NPBWR1
location: 5128830..5129819
location: region:5128830-5129819:1
so has part: feature:5128830-5129819:1:exon

XP_029779875.1
type: Protein
SIO_000068: ncbiprotein

position:5129819:1
position: 5129819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5128830-5129819:1:exon

LOC115279475
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115279475
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5171304..5177008
location: region:5171304-5177008:1
so has part: feature:5171304-5177008:1:exon
subclass of: SO_0000011

115279475
type: Gene
SIO_000068: ncbigene

position:5171304:1
position: 5171304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5177008:1
position: 5177008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5171304-5177008:1:exon

LOC115279475
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115279475
product: uncharacterized LOC115279475
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003903458.1
SIO_010081: LOC115279475
subclass of: SO_0000673
so part of: LOC115279475
location: join(5171304..5171361,5176327..5177008)
location: region:5171304-5177008:1
so has part: feature:5171304-5171361:1:exon
so has part: feature:5176327-5177008:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5171304-5171361:1:exon

position:5171361:1
position: 5171361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5176327-5177008:1:exon

position:5176327:1
position: 5176327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115279453
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115279453
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 5301161..5301900
location: region:5301161-5301900:1
so has part: feature:5301161-5301900:1:exon

115279453
type: Gene
SIO_000068: ncbigene

position:5301161:1
position: 5301161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5301900:1
position: 5301900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5301161-5301900:1:exon

LOC115279453
type: Exon
subclass of: SO_0000147
RO_0002162: 37032
gene: LOC115279453
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC115279453
subclass of: SO_0000673
so part of: LOC115279453
location: 5301161..5301900
location: region:5301161-5301900:1
so has part: feature:5301161-5301900:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5301161-5301900:1:exon

OPRK1
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: OPRK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5325489..5357973)
location: region:5325489-5357973:-1
so has part: feature:5325489-5357973:-1:exon
subclass of: SO_0000010

115279293
type: Gene
SIO_000068: ncbigene

position:5325489:-1
position: 5325489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5357973:-1
position: 5357973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5325489-5357973:-1:exon

OPRK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: OPRK1
product: opioid receptor kappa 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029923845.1
SIO_010081: OPRK1
subclass of: SO_0000673
so part of: OPRK1
location: complement(join(5325489..5328503,5339976..5340328,5357717..5357973))
location: region:5325489-5357973:-1
so has part: feature:5357717-5357973:-1:exon
so has part: feature:5339976-5340328:-1:exon
so has part: feature:5325489-5328503:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5357717-5357973:-1:exon

position:5357717:-1
position: 5357717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5339976-5340328:-1:exon

position:5339976:-1
position: 5339976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5340328:-1
position: 5340328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5325489-5328503:-1:exon

position:5328503:-1
position: 5328503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

OPRK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: OPRK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kappa-type opioid receptor
translation: MEPPVQIFRGEPGPTCPPSTCLPPNGSGWLAGWAEADGNSSGGSEGAPLEPAHISPAIPVIITAVYSVVFVVGLVGNSLVMFVIIRYTKMKTATNIYIFNLALADALVTTTMPFQSAVYLMNSWPFGDVLCKIVISIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPMKAKIINICIWLLSSSVGISAIVLGGTKVREDVDVIECSLQFPDDDYSWWDLFMKICVFVFAFVIPVLIIIVCYTLMILRLKSVRLLSGSREKDRNLRRITRLVLVVVAVFIVCWTPIHIFILVEALGNASHSTTALSSYYFCIALGYTNSSLNPILYAFLDENFKRCFRDFCFPVKMRMERQTTSRVRNTVQDPAYMRDVDGINKPV
SIO_010081: OPRK1
subclass of: SO_0000673
so part of: OPRK1
location: complement(join(5327971..5328503,5339976..5340328,5357717..5357973))
location: region:5327971-5357973:-1
so has part: feature:5357717-5357973:-1:exon
so has part: feature:5339976-5340328:-1:exon
so has part: feature:5327971-5328503:-1:exon

XP_029779705.1
type: Protein
SIO_000068: ncbiprotein

position:5327971:-1
position: 5327971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5357717-5357973:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5339976-5340328:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5327971-5328503:-1:exon

LOC115278659
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115278659
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5416899..5421591
location: region:5416899-5421591:1
so has part: feature:5416899-5421591:1:exon
subclass of: SO_0000011

115278659
type: Gene
SIO_000068: ncbigene

position:5416899:1
position: 5416899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5421591:1
position: 5421591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5416899-5421591:1:exon

LOC115278659
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115278659
product: uncharacterized LOC115278659
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003903014.1
SIO_010081: LOC115278659
subclass of: SO_0000673
so part of: LOC115278659
location: join(5416899..5417108,5421344..5421591)
location: region:5416899-5421591:1
so has part: feature:5416899-5417108:1:exon
so has part: feature:5421344-5421591:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5416899-5417108:1:exon

position:5417108:1
position: 5417108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5421344-5421591:1:exon

position:5421344:1
position: 5421344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115278661
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115278661
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5612937..5615070)
location: region:5612937-5615070:-1
so has part: feature:5612937-5615070:-1:exon
subclass of: SO_0000011

115278661
type: Gene
SIO_000068: ncbigene

position:5612937:-1
position: 5612937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5615070:-1
position: 5615070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5612937-5615070:-1:exon

LOC115278661
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115278661
product: uncharacterized LOC115278661
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_003903016.1
SIO_010081: LOC115278661
subclass of: SO_0000673
so part of: LOC115278661
location: complement(join(5612937..5613322,5614696..5615070))
location: region:5612937-5615070:-1
so has part: feature:5614696-5615070:-1:exon
so has part: feature:5612937-5613322:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5614696-5615070:-1:exon

position:5614696:-1
position: 5614696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5612937-5613322:-1:exon

position:5613322:-1
position: 5613322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115279385
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115279385
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5620462..5640023)
location: region:5620462-5640023:-1
so has part: feature:5620462-5640023:-1:exon
subclass of: SO_0000011

115279385
type: Gene
SIO_000068: ncbigene

position:5620462:-1
position: 5620462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5640023:-1
position: 5640023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5620462-5640023:-1:exon

LOC115279385
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115279385
product: uncharacterized LOC115279385
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003903400.1
SIO_010081: LOC115279385
subclass of: SO_0000673
so part of: LOC115279385
location: complement(join(5620462..5620643,5621717..5621901,5639634..5639704,5639921..5640023))
location: region:5620462-5640023:-1
so has part: feature:5639921-5640023:-1:exon
so has part: feature:5639634-5639704:-1:exon
so has part: feature:5621717-5621901:-1:exon
so has part: feature:5620462-5620643:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5639921-5640023:-1:exon

position:5639921:-1
position: 5639921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5639634-5639704:-1:exon

position:5639634:-1
position: 5639634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5639704:-1
position: 5639704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5621717-5621901:-1:exon

position:5621717:-1
position: 5621717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5621901:-1
position: 5621901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5620462-5620643:-1:exon

position:5620643:-1
position: 5620643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATP6V1H
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: ATP6V1H
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5648276..5760249)
location: region:5648276-5760249:-1
so has part: feature:5648276-5760249:-1:exon
subclass of: SO_0000010

115278668
type: Gene
SIO_000068: ncbigene

position:5648276:-1
position: 5648276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5760249:-1
position: 5760249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5648276-5760249:-1:exon

ATP6V1H
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: ATP6V1H
product: ATPase H+ transporting V1 subunit H, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_029923141.1
SIO_010081: ATP6V1H
subclass of: SO_0000673
so part of: ATP6V1H
location: complement(join(5648276..5648694,5676328..5676441,5693163..5693264,5702977..5703102,5705414..5705592,5720507..5720699,5724479..5724576,5738872..5738976,5740268..5740381,5744458..5744547,5750798..5750900,5758392..5758540,5760178..5760249))
location: region:5648276-5760249:-1
so has part: feature:5760178-5760249:-1:exon
so has part: feature:5758392-5758540:-1:exon
so has part: feature:5750798-5750900:-1:exon
so has part: feature:5744458-5744547:-1:exon
so has part: feature:5740268-5740381:-1:exon
so has part: feature:5738872-5738976:-1:exon
so has part: feature:5724479-5724576:-1:exon
so has part: feature:5720507-5720699:-1:exon
so has part: feature:5705414-5705592:-1:exon
so has part: feature:5702977-5703102:-1:exon
so has part: feature:5693163-5693264:-1:exon
so has part: feature:5676328-5676441:-1:exon
so has part: feature:5648276-5648694:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5760178-5760249:-1:exon

position:5760178:-1
position: 5760178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5758392-5758540:-1:exon

position:5758392:-1
position: 5758392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5758540:-1
position: 5758540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5750798-5750900:-1:exon

position:5750798:-1
position: 5750798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5750900:-1
position: 5750900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5744458-5744547:-1:exon

position:5744458:-1
position: 5744458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5744547:-1
position: 5744547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5740268-5740381:-1:exon

position:5740268:-1
position: 5740268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5740381:-1
position: 5740381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5738872-5738976:-1:exon

position:5738872:-1
position: 5738872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5738976:-1
position: 5738976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5724479-5724576:-1:exon

position:5724479:-1
position: 5724479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5724576:-1
position: 5724576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5720507-5720699:-1:exon

position:5720507:-1
position: 5720507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5720699:-1
position: 5720699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5705414-5705592:-1:exon

position:5705414:-1
position: 5705414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5705592:-1
position: 5705592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5702977-5703102:-1:exon

position:5702977:-1
position: 5702977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5703102:-1
position: 5703102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5693163-5693264:-1:exon

position:5693163:-1
position: 5693163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5693264:-1
position: 5693264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5676328-5676441:-1:exon

position:5676328:-1
position: 5676328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5676441:-1
position: 5676441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5648276-5648694:-1:exon

position:5648694:-1
position: 5648694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATP6V1H
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: ATP6V1H
product: ATPase H+ transporting V1 subunit H, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_029923142.1
SIO_010081: ATP6V1H
subclass of: SO_0000673
so part of: ATP6V1H
location: complement(join(5648276..5648694,5693163..5693264,5702977..5703102,5705414..5705592,5720507..5720699,5724479..5724576,5735531..5735584,5738872..5738976,5740268..5740381,5744458..5744547,5750798..5750900,5758392..5758540,5760178..5760249))
location: region:5648276-5760249:-1
so has part: feature:5760178-5760249:-1:exon
so has part: feature:5758392-5758540:-1:exon
so has part: feature:5750798-5750900:-1:exon
so has part: feature:5744458-5744547:-1:exon
so has part: feature:5740268-5740381:-1:exon
so has part: feature:5738872-5738976:-1:exon
so has part: feature:5735531-5735584:-1:exon
so has part: feature:5724479-5724576:-1:exon
so has part: feature:5720507-5720699:-1:exon
so has part: feature:5705414-5705592:-1:exon
so has part: feature:5702977-5703102:-1:exon
so has part: feature:5693163-5693264:-1:exon
so has part: feature:5648276-5648694:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5760178-5760249:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5758392-5758540:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5750798-5750900:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5744458-5744547:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5740268-5740381:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5738872-5738976:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5735531-5735584:-1:exon

position:5735531:-1
position: 5735531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5735584:-1
position: 5735584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5724479-5724576:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5720507-5720699:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5705414-5705592:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5702977-5703102:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5693163-5693264:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5648276-5648694:-1:exon

ATP6V1H
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: ATP6V1H
product: ATPase H+ transporting V1 subunit H, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_029923140.1
SIO_010081: ATP6V1H
subclass of: SO_0000673
so part of: ATP6V1H
location: complement(join(5648276..5648694,5676328..5676441,5693163..5693264,5702977..5703102,5705414..5705592,5720507..5720699,5724479..5724576,5735531..5735584,5738872..5738976,5740268..5740381,5744458..5744547,5750798..5750900,5758392..5758540,5760178..5760249))
location: region:5648276-5760249:-1
so has part: feature:5760178-5760249:-1:exon
so has part: feature:5758392-5758540:-1:exon
so has part: feature:5750798-5750900:-1:exon
so has part: feature:5744458-5744547:-1:exon
so has part: feature:5740268-5740381:-1:exon
so has part: feature:5738872-5738976:-1:exon
so has part: feature:5735531-5735584:-1:exon
so has part: feature:5724479-5724576:-1:exon
so has part: feature:5720507-5720699:-1:exon
so has part: feature:5705414-5705592:-1:exon
so has part: feature:5702977-5703102:-1:exon
so has part: feature:5693163-5693264:-1:exon
so has part: feature:5676328-5676441:-1:exon
so has part: feature:5648276-5648694:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5760178-5760249:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5758392-5758540:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5750798-5750900:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5744458-5744547:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5740268-5740381:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5738872-5738976:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5735531-5735584:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5724479-5724576:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5720507-5720699:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5705414-5705592:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5702977-5703102:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5693163-5693264:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5676328-5676441:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5648276-5648694:-1:exon

ATP6V1H
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: ATP6V1H
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: V-type proton ATPase subunit H isoform X2
translation: MTKMDIRGAVDAAVPTNIIAAKAAEVRANKVNWQSYLQGQMISAEDCEFIQRFEMKRTPEEKQEMLQTEGSQCAKTFINLMTHISKEQTVQYILTLVDDMLQENHQRVSIFFDCAKRSKSTAWSYFLPMLNRQDLFTVHMAARIIAKLAAWGKELMEGSDLNYYFNWIKTQLSSQSSQHAQCVAGCLQLMLRVDEHRFAWAAADGVSCIMGVLSNKCGFQLQYQMIFSIWLLAFSPQMCEHLRRYNIIPVLSDILQESVKEKVTRIILAAFRNFLEKSTERETRQEYALAMIQCKVLKQLENLEQQKYDDEDISEDIKFLLEKLGESVQDLSSFDEYSSELKSGRLEWSPVHKSEKFWRENAVRLNEKNYELLKILTKLLEVSDDPQVLAVAAHDVGEYVRHYPRGKRVIEQLGGKQLVMNHMHHEDQQVRYNALLAVQKLMVHNWEYLGKQLQSEQPQTAAARS
SIO_010081: ATP6V1H
subclass of: SO_0000673
so part of: ATP6V1H
location: complement(join(5648634..5648694,5676328..5676441,5693163..5693264,5702977..5703102,5705414..5705592,5720507..5720699,5724479..5724576,5738872..5738976,5740268..5740381,5744458..5744547,5750798..5750900,5758392..5758504))
location: region:5648634-5758504:-1
so has part: feature:5758392-5758504:-1:exon
so has part: feature:5750798-5750900:-1:exon
so has part: feature:5744458-5744547:-1:exon
so has part: feature:5740268-5740381:-1:exon
so has part: feature:5738872-5738976:-1:exon
so has part: feature:5724479-5724576:-1:exon
so has part: feature:5720507-5720699:-1:exon
so has part: feature:5705414-5705592:-1:exon
so has part: feature:5702977-5703102:-1:exon
so has part: feature:5693163-5693264:-1:exon
so has part: feature:5676328-5676441:-1:exon
so has part: feature:5648634-5648694:-1:exon

XP_029779001.1
type: Protein
SIO_000068: ncbiprotein

position:5648634:-1
position: 5648634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5758504:-1
position: 5758504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5758392-5758504:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5750798-5750900:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5744458-5744547:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5740268-5740381:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5738872-5738976:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5724479-5724576:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5720507-5720699:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5705414-5705592:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5702977-5703102:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5693163-5693264:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5676328-5676441:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5648634-5648694:-1:exon

ATP6V1H
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: ATP6V1H
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: V-type proton ATPase subunit H isoform X3
translation: MTKMDIRGAVDAAVPTNIIAAKAAEVRANKVNWQSYLQGQMISAEDCEFIQRFEMKRTPEEKQEMLQTEGSQCAKTFINLMTHISKEQTVQYILTLVDDMLQENHQRVSIFFDCAKRSKSTAWSYFLPMLNRQDLFTVHMAARIIAKLAAWGKELMEGSDLNYYFNWIKTQLSSQKLRGSGVAVETGTVSSSDSSQHAQCVAGCLQLMLRVDEHRFAWAAADGVSCIMGVLSNKCGFQLQYQMIFSIWLLAFSPQMCEHLRRYNIIPVLSDILQESVKEKVTRIILAAFRNFLEKSTERETRQEYALAMIQCKVLKQLENLEQQKYDDEDISEDIKFLLEKLGESVQDLSSFDEYSSELKSGRLEWSPVHKSEKFWRENAVRLNEKNYELLKILTKLLEVSDDPQVLAVAAHDVGEYVRHYPRGKREYLGKQLQSEQPQTAAARS
SIO_010081: ATP6V1H
subclass of: SO_0000673
so part of: ATP6V1H
location: complement(join(5648634..5648694,5693163..5693264,5702977..5703102,5705414..5705592,5720507..5720699,5724479..5724576,5735531..5735584,5738872..5738976,5740268..5740381,5744458..5744547,5750798..5750900,5758392..5758504))
location: region:5648634-5758504:-1
so has part: feature:5758392-5758504:-1:exon
so has part: feature:5750798-5750900:-1:exon
so has part: feature:5744458-5744547:-1:exon
so has part: feature:5740268-5740381:-1:exon
so has part: feature:5738872-5738976:-1:exon
so has part: feature:5735531-5735584:-1:exon
so has part: feature:5724479-5724576:-1:exon
so has part: feature:5720507-5720699:-1:exon
so has part: feature:5705414-5705592:-1:exon
so has part: feature:5702977-5703102:-1:exon
so has part: feature:5693163-5693264:-1:exon
so has part: feature:5648634-5648694:-1:exon

XP_029779002.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5758392-5758504:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5750798-5750900:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5744458-5744547:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5740268-5740381:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5738872-5738976:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5735531-5735584:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5724479-5724576:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5720507-5720699:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5705414-5705592:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5702977-5703102:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5693163-5693264:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5648634-5648694:-1:exon

ATP6V1H
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: ATP6V1H
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: V-type proton ATPase subunit H isoform X1
translation: MTKMDIRGAVDAAVPTNIIAAKAAEVRANKVNWQSYLQGQMISAEDCEFIQRFEMKRTPEEKQEMLQTEGSQCAKTFINLMTHISKEQTVQYILTLVDDMLQENHQRVSIFFDCAKRSKSTAWSYFLPMLNRQDLFTVHMAARIIAKLAAWGKELMEGSDLNYYFNWIKTQLSSQKLRGSGVAVETGTVSSSDSSQHAQCVAGCLQLMLRVDEHRFAWAAADGVSCIMGVLSNKCGFQLQYQMIFSIWLLAFSPQMCEHLRRYNIIPVLSDILQESVKEKVTRIILAAFRNFLEKSTERETRQEYALAMIQCKVLKQLENLEQQKYDDEDISEDIKFLLEKLGESVQDLSSFDEYSSELKSGRLEWSPVHKSEKFWRENAVRLNEKNYELLKILTKLLEVSDDPQVLAVAAHDVGEYVRHYPRGKRVIEQLGGKQLVMNHMHHEDQQVRYNALLAVQKLMVHNWEYLGKQLQSEQPQTAAARS
SIO_010081: ATP6V1H
subclass of: SO_0000673
so part of: ATP6V1H
location: complement(join(5648634..5648694,5676328..5676441,5693163..5693264,5702977..5703102,5705414..5705592,5720507..5720699,5724479..5724576,5735531..5735584,5738872..5738976,5740268..5740381,5744458..5744547,5750798..5750900,5758392..5758504))
location: region:5648634-5758504:-1
so has part: feature:5758392-5758504:-1:exon
so has part: feature:5750798-5750900:-1:exon
so has part: feature:5744458-5744547:-1:exon
so has part: feature:5740268-5740381:-1:exon
so has part: feature:5738872-5738976:-1:exon
so has part: feature:5735531-5735584:-1:exon
so has part: feature:5724479-5724576:-1:exon
so has part: feature:5720507-5720699:-1:exon
so has part: feature:5705414-5705592:-1:exon
so has part: feature:5702977-5703102:-1:exon
so has part: feature:5693163-5693264:-1:exon
so has part: feature:5676328-5676441:-1:exon
so has part: feature:5648634-5648694:-1:exon

XP_029779000.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5758392-5758504:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5750798-5750900:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5744458-5744547:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5740268-5740381:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5738872-5738976:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5735531-5735584:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5724479-5724576:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5720507-5720699:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5705414-5705592:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5702977-5703102:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5693163-5693264:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5676328-5676441:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5648634-5648694:-1:exon

RGS20
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: RGS20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5830804..5847936
location: region:5830804-5847936:1
so has part: feature:5830804-5847936:1:exon
subclass of: SO_0000010

115279067
type: Gene
SIO_000068: ncbigene

position:5830804:1
position: 5830804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5847936:1
position: 5847936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5830804-5847936:1:exon

RGS20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: RGS20
product: regulator of G protein signaling 20
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_029923595.1
SIO_010081: RGS20
subclass of: SO_0000673
so part of: RGS20
location: join(5830804..5831025,5840002..5840088,5844200..5844434,5846959..5847936)
location: region:5830804-5847936:1
so has part: feature:5830804-5831025:1:exon
so has part: feature:5840002-5840088:1:exon
so has part: feature:5844200-5844434:1:exon
so has part: feature:5846959-5847936:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5830804-5831025:1:exon

position:5831025:1
position: 5831025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5840002-5840088:1:exon

position:5840002:1
position: 5840002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5840088:1
position: 5840088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5844200-5844434:1:exon

position:5844200:1
position: 5844200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5844434:1
position: 5844434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5846959-5847936:1:exon

position:5846959:1
position: 5846959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RGS20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: RGS20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of G-protein signaling 20
translation: MGSERLEMRKRQMPGAPETAGSMPAQPGPGTRGSNACCFCWCCCCSCSCLTVRNQEEQRPRRASQELRQEDLPTSEESPSPTLEEVNAWAQSFDKVMLTPAGRNAFREFLRTEFSEENMLFWMACEELKKEANKSIIEEKARIIYEDYISILSPKEVSLDSRVREVINRNMVEPTQHIFDDAQLQIYTLMHRDSYPRFMNSALYKDLLQSLSEKSVEA
SIO_010081: RGS20
subclass of: SO_0000673
so part of: RGS20
location: join(5830880..5831025,5840002..5840088,5844200..5844434,5846959..5847147)
location: region:5830880-5847147:1
so has part: feature:5830880-5831025:1:exon
so has part: feature:5840002-5840088:1:exon
so has part: feature:5844200-5844434:1:exon
so has part: feature:5846959-5847147:1:exon

XP_029779455.1
type: Protein
SIO_000068: ncbiprotein

position:5830880:1
position: 5830880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5847147:1
position: 5847147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5830880-5831025:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5840002-5840088:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5844200-5844434:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5846959-5847147:1:exon

LOC115279455
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115279455
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 5858870..5859618
location: region:5858870-5859618:1
so has part: feature:5858870-5859618:1:exon

115279455
type: Gene
SIO_000068: ncbigene

position:5858870:1
position: 5858870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5859618:1
position: 5859618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5858870-5859618:1:exon

LOC115279455
type: Exon
subclass of: SO_0000147
RO_0002162: 37032
gene: LOC115279455
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 41% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC115279455
subclass of: SO_0000673
so part of: LOC115279455
location: 5858870..5859618
location: region:5858870-5859618:1
so has part: feature:5858870-5859618:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5858870-5859618:1:exon

LOC115279083
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115279083
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5862465..5868596)
location: region:5862465-5868596:-1
so has part: feature:5862465-5868596:-1:exon
subclass of: SO_0000011

115279083
type: Gene
SIO_000068: ncbigene

position:5862465:-1
position: 5862465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5868596:-1
position: 5868596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5862465-5868596:-1:exon

LOC115279083
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115279083
product: uncharacterized LOC115279083
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003903195.1
SIO_010081: LOC115279083
subclass of: SO_0000673
so part of: LOC115279083
location: complement(join(5862465..5862674,5866117..5866195,5868515..5868596))
location: region:5862465-5868596:-1
so has part: feature:5868515-5868596:-1:exon
so has part: feature:5866117-5866195:-1:exon
so has part: feature:5862465-5862674:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5868515-5868596:-1:exon

position:5868515:-1
position: 5868515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5866117-5866195:-1:exon

position:5866117:-1
position: 5866117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5866195:-1
position: 5866195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5862465-5862674:-1:exon

position:5862674:-1
position: 5862674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TCEA1
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: TCEA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5897757..5945226)
location: region:5897757-5945226:-1
so has part: feature:5897757-5945226:-1:exon
subclass of: SO_0000010

115279097
type: Gene
SIO_000068: ncbigene

position:5897757:-1
position: 5897757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5945226:-1
position: 5945226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5897757-5945226:-1:exon

TCEA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: TCEA1
product: transcription elongation factor A1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_029923629.1
SIO_010081: TCEA1
subclass of: SO_0000673
so part of: TCEA1
location: complement(join(5897757..5897991,5910071..5910142,5916265..5916411,5918496..5918650,5918982..5919038,5920346..5920488,5923444..5923531,5928862..5928967,5933794..5933856,5944876..5945226))
location: region:5897757-5945226:-1
so has part: feature:5944876-5945226:-1:exon
so has part: feature:5933794-5933856:-1:exon
so has part: feature:5928862-5928967:-1:exon
so has part: feature:5923444-5923531:-1:exon
so has part: feature:5920346-5920488:-1:exon
so has part: feature:5918982-5919038:-1:exon
so has part: feature:5918496-5918650:-1:exon
so has part: feature:5916265-5916411:-1:exon
so has part: feature:5910071-5910142:-1:exon
so has part: feature:5897757-5897991:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5944876-5945226:-1:exon

position:5944876:-1
position: 5944876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5933794-5933856:-1:exon

position:5933794:-1
position: 5933794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5933856:-1
position: 5933856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5928862-5928967:-1:exon

position:5928862:-1
position: 5928862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5928967:-1
position: 5928967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5923444-5923531:-1:exon

position:5923444:-1
position: 5923444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5923531:-1
position: 5923531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5920346-5920488:-1:exon

position:5920346:-1
position: 5920346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5920488:-1
position: 5920488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5918982-5919038:-1:exon

position:5918982:-1
position: 5918982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5919038:-1
position: 5919038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5918496-5918650:-1:exon

position:5918496:-1
position: 5918496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5918650:-1
position: 5918650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5916265-5916411:-1:exon

position:5916265:-1
position: 5916265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5916411:-1
position: 5916411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5910071-5910142:-1:exon

position:5910071:-1
position: 5910071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5910142:-1
position: 5910142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5897757-5897991:-1:exon

position:5897991:-1
position: 5897991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TCEA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: TCEA1
product: transcription elongation factor A1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_029923628.1
SIO_010081: TCEA1
subclass of: SO_0000673
so part of: TCEA1
location: complement(join(5897757..5897991,5910071..5910142,5916265..5916411,5918496..5918650,5918982..5919038,5920346..5920491,5923444..5923531,5928862..5928967,5933794..5933856,5944876..5945223))
location: region:5897757-5945223:-1
so has part: feature:5944876-5945223:-1:exon
so has part: feature:5933794-5933856:-1:exon
so has part: feature:5928862-5928967:-1:exon
so has part: feature:5923444-5923531:-1:exon
so has part: feature:5920346-5920491:-1:exon
so has part: feature:5918982-5919038:-1:exon
so has part: feature:5918496-5918650:-1:exon
so has part: feature:5916265-5916411:-1:exon
so has part: feature:5910071-5910142:-1:exon
so has part: feature:5897757-5897991:-1:exon

position:5945223:-1
position: 5945223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5944876-5945223:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5933794-5933856:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5928862-5928967:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5923444-5923531:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5920346-5920491:-1:exon

position:5920491:-1
position: 5920491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5918982-5919038:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5918496-5918650:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5916265-5916411:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5910071-5910142:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5897757-5897991:-1:exon

TCEA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: TCEA1
product: transcription elongation factor A1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029923630.1
SIO_010081: TCEA1
subclass of: SO_0000673
so part of: TCEA1
location: complement(join(5897757..5897991,5910071..5910142,5916265..5916411,5918496..5918650,5918982..5919038,5920346..5920491,5923444..5923531,5928862..5928967,5933794..5933856,5935442..5935663,5944876..5945223))
location: region:5897757-5945223:-1
so has part: feature:5944876-5945223:-1:exon
so has part: feature:5935442-5935663:-1:exon
so has part: feature:5933794-5933856:-1:exon
so has part: feature:5928862-5928967:-1:exon
so has part: feature:5923444-5923531:-1:exon
so has part: feature:5920346-5920491:-1:exon
so has part: feature:5918982-5919038:-1:exon
so has part: feature:5918496-5918650:-1:exon
so has part: feature:5916265-5916411:-1:exon
so has part: feature:5910071-5910142:-1:exon
so has part: feature:5897757-5897991:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5944876-5945223:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5935442-5935663:-1:exon

position:5935442:-1
position: 5935442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5935663:-1
position: 5935663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5933794-5933856:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5928862-5928967:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5923444-5923531:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5920346-5920491:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5918982-5919038:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5918496-5918650:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5916265-5916411:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5910071-5910142:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5897757-5897991:-1:exon

TCEA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: TCEA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation factor A protein 1 isoform X2
translation: MEDEVVRIAKKMDKMVQKKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPSTDKDPEEKKKDTAVTSQNSPEAREESSSGNAGSRKEEADARDTYVSSFPRAPSTSDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKAVDGARFDQGREKGDRMAEAEVGVMFSEDGERVHKPKKLKS
SIO_010081: TCEA1
subclass of: SO_0000673
so part of: TCEA1
location: complement(join(5897866..5897991,5910071..5910142,5916265..5916411,5918496..5918650,5918982..5919038,5920346..5920488,5923444..5923531,5928862..5928967,5933794..5933856,5944876..5944938))
location: region:5897866-5944938:-1
so has part: feature:5944876-5944938:-1:exon
so has part: feature:5933794-5933856:-1:exon
so has part: feature:5928862-5928967:-1:exon
so has part: feature:5923444-5923531:-1:exon
so has part: feature:5920346-5920488:-1:exon
so has part: feature:5918982-5919038:-1:exon
so has part: feature:5918496-5918650:-1:exon
so has part: feature:5916265-5916411:-1:exon
so has part: feature:5910071-5910142:-1:exon
so has part: feature:5897866-5897991:-1:exon

XP_029779489.1
type: Protein
SIO_000068: ncbiprotein

position:5897866:-1
position: 5897866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5944938:-1
position: 5944938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5944876-5944938:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5933794-5933856:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5928862-5928967:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5923444-5923531:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5920346-5920488:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5918982-5919038:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5918496-5918650:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5916265-5916411:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5910071-5910142:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5897866-5897991:-1:exon

TCEA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: TCEA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation factor A protein 1 isoform X1
translation: MEDEVVRIAKKMDKMVQKKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPSTDKDPEEKKKDTAVTSQNSPEAREESSSSGNAGSRKEEADARDTYVSSFPRAPSTSDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKAVDGARFDQGREKGDRMAEAEVGVMFSEDGERVHKPKKLKS
SIO_010081: TCEA1
subclass of: SO_0000673
so part of: TCEA1
location: complement(join(5897866..5897991,5910071..5910142,5916265..5916411,5918496..5918650,5918982..5919038,5920346..5920491,5923444..5923531,5928862..5928967,5933794..5933856,5944876..5944938))
location: region:5897866-5944938:-1
so has part: feature:5944876-5944938:-1:exon
so has part: feature:5933794-5933856:-1:exon
so has part: feature:5928862-5928967:-1:exon
so has part: feature:5923444-5923531:-1:exon
so has part: feature:5920346-5920491:-1:exon
so has part: feature:5918982-5919038:-1:exon
so has part: feature:5918496-5918650:-1:exon
so has part: feature:5916265-5916411:-1:exon
so has part: feature:5910071-5910142:-1:exon
so has part: feature:5897866-5897991:-1:exon

XP_029779488.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5944876-5944938:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5933794-5933856:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5928862-5928967:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5923444-5923531:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5920346-5920491:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5918982-5919038:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5918496-5918650:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5916265-5916411:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5910071-5910142:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5897866-5897991:-1:exon

TCEA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: TCEA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation factor A protein 1 isoform X3
translation: MTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPSTDKDPEEKKKDTAVTSQNSPEAREESSSSGNAGSRKEEADARDTYVSSFPRAPSTSDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKAVDGARFDQGREKGDRMAEAEVGVMFSEDGERVHKPKKLKS
SIO_010081: TCEA1
subclass of: SO_0000673
so part of: TCEA1
location: complement(join(5897866..5897991,5910071..5910142,5916265..5916411,5918496..5918650,5918982..5919038,5920346..5920491,5923444..5923531,5928862..5928967,5933794..5933814))
location: region:5897866-5933814:-1
so has part: feature:5933794-5933814:-1:exon
so has part: feature:5928862-5928967:-1:exon
so has part: feature:5923444-5923531:-1:exon
so has part: feature:5920346-5920491:-1:exon
so has part: feature:5918982-5919038:-1:exon
so has part: feature:5918496-5918650:-1:exon
so has part: feature:5916265-5916411:-1:exon
so has part: feature:5910071-5910142:-1:exon
so has part: feature:5897866-5897991:-1:exon

XP_029779490.1
type: Protein
SIO_000068: ncbiprotein

position:5933814:-1
position: 5933814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5933794-5933814:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5928862-5928967:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5923444-5923531:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5920346-5920491:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5918982-5919038:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5918496-5918650:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5916265-5916411:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5910071-5910142:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5897866-5897991:-1:exon

TCEA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: TCEA1
product: transcription elongation factor A1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_029923631.1
SIO_010081: TCEA1
subclass of: SO_0000673
so part of: TCEA1
location: complement(join(5906757..5908360,5910071..5910142,5916265..5916411,5918496..5918650,5918982..5919038,5920346..5920491,5923444..5923531,5928862..5928967,5933794..5933856,5944876..5945216))
location: region:5906757-5945216:-1
so has part: feature:5944876-5945216:-1:exon
so has part: feature:5933794-5933856:-1:exon
so has part: feature:5928862-5928967:-1:exon
so has part: feature:5923444-5923531:-1:exon
so has part: feature:5920346-5920491:-1:exon
so has part: feature:5918982-5919038:-1:exon
so has part: feature:5918496-5918650:-1:exon
so has part: feature:5916265-5916411:-1:exon
so has part: feature:5910071-5910142:-1:exon
so has part: feature:5906757-5908360:-1:exon

position:5906757:-1
position: 5906757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5945216:-1
position: 5945216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5944876-5945216:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5933794-5933856:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5928862-5928967:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5923444-5923531:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5920346-5920491:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5918982-5919038:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5918496-5918650:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5916265-5916411:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5910071-5910142:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5906757-5908360:-1:exon

position:5908360:-1
position: 5908360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TCEA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: TCEA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation factor A protein 1 isoform X4
translation: MEDEVVRIAKKMDKMVQKKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPSTDKDPEEKKKDTAVTSQNSPEAREESSSSGNAGSRKEEADARDTYVSSFPRAPSTSDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC
SIO_010081: TCEA1
subclass of: SO_0000673
so part of: TCEA1
location: complement(join(5908352..5908360,5910071..5910142,5916265..5916411,5918496..5918650,5918982..5919038,5920346..5920491,5923444..5923531,5928862..5928967,5933794..5933856,5944876..5944938))
location: region:5908352-5944938:-1
so has part: feature:5944876-5944938:-1:exon
so has part: feature:5933794-5933856:-1:exon
so has part: feature:5928862-5928967:-1:exon
so has part: feature:5923444-5923531:-1:exon
so has part: feature:5920346-5920491:-1:exon
so has part: feature:5918982-5919038:-1:exon
so has part: feature:5918496-5918650:-1:exon
so has part: feature:5916265-5916411:-1:exon
so has part: feature:5910071-5910142:-1:exon
so has part: feature:5908352-5908360:-1:exon

XP_029779491.1
type: Protein
SIO_000068: ncbiprotein

position:5908352:-1
position: 5908352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5944876-5944938:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5933794-5933856:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5928862-5928967:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5923444-5923531:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5920346-5920491:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5918982-5919038:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5918496-5918650:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5916265-5916411:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5910071-5910142:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5908352-5908360:-1:exon

LYPLA1
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LYPLA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5952936..5978682)
location: region:5952936-5978682:-1
so has part: feature:5952936-5978682:-1:exon
subclass of: SO_0000010

115279241
type: Gene
SIO_000068: ncbigene

position:5952936:-1
position: 5952936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5978682:-1
position: 5978682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5952936-5978682:-1:exon

LYPLA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: LYPLA1
product: lysophospholipase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_029923779.1
SIO_010081: LYPLA1
subclass of: SO_0000673
so part of: LYPLA1
location: complement(join(5952936..5954622,5957704..5957880,5958911..5959012,5960975..5961048,5963974..5964044,5965278..5965325,5966671..5966736,5978656..5978682))
location: region:5952936-5978682:-1
so has part: feature:5978656-5978682:-1:exon
so has part: feature:5966671-5966736:-1:exon
so has part: feature:5965278-5965325:-1:exon
so has part: feature:5963974-5964044:-1:exon
so has part: feature:5960975-5961048:-1:exon
so has part: feature:5958911-5959012:-1:exon
so has part: feature:5957704-5957880:-1:exon
so has part: feature:5952936-5954622:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5978656-5978682:-1:exon

position:5978656:-1
position: 5978656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5966671-5966736:-1:exon

position:5966671:-1
position: 5966671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5966736:-1
position: 5966736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5965278-5965325:-1:exon

position:5965278:-1
position: 5965278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5965325:-1
position: 5965325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5963974-5964044:-1:exon

position:5963974:-1
position: 5963974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5964044:-1
position: 5964044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5960975-5961048:-1:exon

position:5960975:-1
position: 5960975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5961048:-1
position: 5961048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5958911-5959012:-1:exon

position:5958911:-1
position: 5958911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5959012:-1
position: 5959012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5957704-5957880:-1:exon

position:5957704:-1
position: 5957704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5957880:-1
position: 5957880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5952936-5954622:-1:exon

position:5954622:-1
position: 5954622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LYPLA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: LYPLA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acyl-protein thioesterase 1
translation: MPVTLNMNMSMPSWFDIIGLSPDSQEDEPGIKQAAENVKALIEEEMKNGIPSNRIILGGFSQGGALSLYAALTTQQKLAGVTALSCWLPLRASFAQGPISGVNRDIPILQCHGDCDPLVPLMIASLTSEKLKTLVNPANVTFKTYEGMMHSSCQQEMMDIKQFIDKLLPPVD
SIO_010081: LYPLA1
subclass of: SO_0000673
so part of: LYPLA1
location: complement(join(5954569..5954622,5957704..5957880,5958911..5959012,5960975..5961048,5963974..5964044,5965278..5965318))
location: region:5954569-5965318:-1
so has part: feature:5965278-5965318:-1:exon
so has part: feature:5963974-5964044:-1:exon
so has part: feature:5960975-5961048:-1:exon
so has part: feature:5958911-5959012:-1:exon
so has part: feature:5957704-5957880:-1:exon
so has part: feature:5954569-5954622:-1:exon

XP_029779639.1
type: Protein
SIO_000068: ncbiprotein

position:5954569:-1
position: 5954569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5965318:-1
position: 5965318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5965278-5965318:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5963974-5964044:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5960975-5961048:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5958911-5959012:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5957704-5957880:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5954569-5954622:-1:exon

MRPL15
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: MRPL15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5998607..6005682
location: region:5998607-6005682:1
so has part: feature:5998607-6005682:1:exon
subclass of: SO_0000010

115279248
type: Gene
SIO_000068: ncbigene

position:5998607:1
position: 5998607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6005682:1
position: 6005682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5998607-6005682:1:exon

MRPL15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: MRPL15
product: mitochondrial ribosomal protein L15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_029923789.1
SIO_010081: MRPL15
subclass of: SO_0000673
so part of: MRPL15
location: join(5998607..5998778,5999617..5999771,6000584..6000749,6004200..6004323,6005209..6005682)
location: region:5998607-6005682:1
so has part: feature:5998607-5998778:1:exon
so has part: feature:5999617-5999771:1:exon
so has part: feature:6000584-6000749:1:exon
so has part: feature:6004200-6004323:1:exon
so has part: feature:6005209-6005682:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5998607-5998778:1:exon

position:5998778:1
position: 5998778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5999617-5999771:1:exon

position:5999617:1
position: 5999617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5999771:1
position: 5999771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6000584-6000749:1:exon

position:6000584:1
position: 6000584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6000749:1
position: 6000749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6004200-6004323:1:exon

position:6004200:1
position: 6004200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6004323:1
position: 6004323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6005209-6005682:1:exon

position:6005209:1
position: 6005209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MRPL15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: MRPL15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 39S ribosomal protein L15, mitochondrial
translation: MAGPLRGGGTGALELLRALPRVNLANLKPNPGSRRPERRRRGQRRGRKCGRGHKGERQRGTRPRLGFEGGQTPFYIRIPKYGFNEGHSFRRQYQPLSLNRLQYLIDLGRVDPTQPIDLTQLVNARGVTVQPLKRDYGVQLVEEGADTFQAKVNIEVQLASELAIAAIERNGGVVTTAFYDPRSLEILCKPIPFFLRGQPIPKRMLPPEALVPYYTDAKNRGYLADPAAFPEARLELAKKYGYILPDITKDELFKMLSTRKDPRQIFFGLAPGWVVNMADKKILKPTDENLLKYYSS
SIO_010081: MRPL15
subclass of: SO_0000673
so part of: MRPL15
location: join(5998671..5998778,5999617..5999771,6000584..6000749,6004200..6004323,6005209..6005546)
location: region:5998671-6005546:1
so has part: feature:5998671-5998778:1:exon
so has part: feature:5999617-5999771:1:exon
so has part: feature:6000584-6000749:1:exon
so has part: feature:6004200-6004323:1:exon
so has part: feature:6005209-6005546:1:exon

XP_029779649.1
type: Protein
SIO_000068: ncbiprotein

position:5998671:1
position: 5998671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6005546:1
position: 6005546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5998671-5998778:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5999617-5999771:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6000584-6000749:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6004200-6004323:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6005209-6005546:1:exon

SOX17
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: SOX17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6245609..6247656
location: region:6245609-6247656:1
so has part: feature:6245609-6247656:1:exon
subclass of: SO_0000010

115279456
type: Gene
SIO_000068: ncbigene

position:6245609:1
position: 6245609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6247656:1
position: 6247656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6245609-6247656:1:exon

SOX17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: SOX17
product: SRY-box transcription factor 17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029924007.1
SIO_010081: SOX17
subclass of: SO_0000673
so part of: SOX17
location: join(6245609..6246088,6246642..6246888,6247003..6247656)
location: region:6245609-6247656:1
so has part: feature:6245609-6246088:1:exon
so has part: feature:6246642-6246888:1:exon
so has part: feature:6247003-6247656:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6245609-6246088:1:exon

position:6246088:1
position: 6246088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6246642-6246888:1:exon

position:6246642:1
position: 6246642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6246888:1
position: 6246888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6247003-6247656:1:exon

position:6247003:1
position: 6247003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SOX17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: SOX17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor SOX-17
translation: MSSPDAGYASDDQSQPRSALPAVMAGLGPCPWAESLSPLGDMKVKGEAAASSGAPAGAAGRAKGESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQVKRLKRVEGGFLHGLAETQAATLGPEGGRVAVDGLGLPFPDPAGPGQPSPPPEALPCRDGADPGQPAELLGDVDRTEFEQYLHFVCKPEMGLPYQGHDSGVTLPDSHGAISSVVSDASSAVYYCSYPDV
SIO_010081: SOX17
subclass of: SO_0000673
so part of: SOX17
location: join(6245782..6246088,6246642..6246888,6247003..6247270)
location: region:6245782-6247270:1
so has part: feature:6245782-6246088:1:exon
so has part: feature:6246642-6246888:1:exon
so has part: feature:6247003-6247270:1:exon

XP_029779867.1
type: Protein
SIO_000068: ncbiprotein

position:6245782:1
position: 6245782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6247270:1
position: 6247270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6245782-6246088:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6246642-6246888:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6247003-6247270:1:exon

LOC115279216
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115279216
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6249020..6252303
location: region:6249020-6252303:1
so has part: feature:6249020-6252303:1:exon
subclass of: SO_0000011

115279216
type: Gene
SIO_000068: ncbigene

position:6249020:1
position: 6249020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6252303:1
position: 6252303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6249020-6252303:1:exon

LOC115279216
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115279216
product: uncharacterized LOC115279216
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003903290.1
SIO_010081: LOC115279216
subclass of: SO_0000673
so part of: LOC115279216
location: join(6249020..6249134,6250932..6251400,6251492..6252303)
location: region:6249020-6252303:1
so has part: feature:6249020-6249134:1:exon
so has part: feature:6250932-6251400:1:exon
so has part: feature:6251492-6252303:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6249020-6249134:1:exon

position:6249134:1
position: 6249134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6250932-6251400:1:exon

position:6250932:1
position: 6250932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6251400:1
position: 6251400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6251492-6252303:1:exon

position:6251492:1
position: 6251492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115279214
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115279214
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6252933..6254640)
location: region:6252933-6254640:-1
so has part: feature:6252933-6254640:-1:exon
subclass of: SO_0000011

115279214
type: Gene
SIO_000068: ncbigene

position:6252933:-1
position: 6252933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6254640:-1
position: 6254640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6252933-6254640:-1:exon

LOC115279214
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115279214
product: uncharacterized LOC115279214, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003903289.1
SIO_010081: LOC115279214
subclass of: SO_0000673
so part of: LOC115279214
location: complement(join(6252933..6253290,6253517..6253633,6253954..6254055,6254455..6254640))
location: region:6252933-6254640:-1
so has part: feature:6254455-6254640:-1:exon
so has part: feature:6253954-6254055:-1:exon
so has part: feature:6253517-6253633:-1:exon
so has part: feature:6252933-6253290:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6254455-6254640:-1:exon

position:6254455:-1
position: 6254455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6253954-6254055:-1:exon

position:6253954:-1
position: 6253954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6254055:-1
position: 6254055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6253517-6253633:-1:exon

position:6253517:-1
position: 6253517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6253633:-1
position: 6253633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6252933-6253290:-1:exon

position:6253290:-1
position: 6253290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115279214
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115279214
product: uncharacterized LOC115279214, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003903288.1
SIO_010081: LOC115279214
subclass of: SO_0000673
so part of: LOC115279214
location: complement(join(6252933..6253290,6253517..6253633,6253954..6254055,6254318..6254640))
location: region:6252933-6254640:-1
so has part: feature:6254318-6254640:-1:exon
so has part: feature:6253954-6254055:-1:exon
so has part: feature:6253517-6253633:-1:exon
so has part: feature:6252933-6253290:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6254318-6254640:-1:exon

position:6254318:-1
position: 6254318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6253954-6254055:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6253517-6253633:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6252933-6253290:-1:exon

RP1
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: RP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6370912..6381261
location: region:6370912-6381261:1
so has part: feature:6370912-6381261:1:exon
subclass of: SO_0000010

115279389
type: Gene
SIO_000068: ncbigene

position:6370912:1
position: 6370912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6381261:1
position: 6381261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6370912-6381261:1:exon

RP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: RP1
product: RP1 axonemal microtubule associated
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 1% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029923943.1
SIO_010081: RP1
subclass of: SO_0000673
so part of: RP1
location: join(6370912..6371529,6373131..6373302,6375626..6381261)
location: region:6370912-6381261:1
so has part: feature:6370912-6371529:1:exon
so has part: feature:6373131-6373302:1:exon
so has part: feature:6375626-6381261:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6370912-6371529:1:exon

position:6371529:1
position: 6371529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6373131-6373302:1:exon

position:6373131:1
position: 6373131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6373302:1
position: 6373302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6375626-6381261:1:exon

position:6375626:1
position: 6375626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: RP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oxygen-regulated protein 1
translation: MSETSSTSFSMIHPTASEGQGLRSRHMSVTLPVVAKKISFYKSGDPQFGGVRVVVNPRSFKTFDALLDNLSSKVPLPFGVRNISTPRGRHSITRLEELEDGQSYLCSHRRKVQPVDLDKARRRLRPWYSSRAIRTHAHSSPPAATAAPGVLRAPRSLLVFKNGDPKTRRKVVLNRRVTQSFQAFLQHLMEVMRFPVTKLYATDGRKVPSLQAVILSSGAVVAAGREPFKPGNYDIQKYLLSSRLPAISHHGLSKGTARSQSRKMSTHVSSSSRSQIYSVSSDKMRNNDCYSEHSFASENYLALEKNDSQNLLIYPSEDDIEKSVIFNQDGTMIVEMKVRFKIKGEETIKWTTVSRAGLSNDDEKSEVGRLPGRTDDQSSGVKIVACSLSADVSSLRTGSNQEGSWAEEVDTQTTDRETETGTSASWENAVDTDTIRETQDQAKHHFYRPPTPGPKRVRQKKSVRGSVTLVSETEVQEEMIKQFSYSEEREDGENKSEYHMFTHSCSTMSSVSNRPVVVHVNNNEQTESSLEIEKESARLKSGAVHADVVEITSEKMLEVSHNTGLPQTVSEHPVVEERIVSSVTSDDKPGIKNLRPYGNTSDRFSPFLADTTHYLSNDSGTDITIFETPASVGSSTVTTRIDRLINEFAQCGLTKFPANEKQISSSLASKKKIKSQQQVINSKHQDGKITTKGILNRSKRISKGGRIAQEIILKDSHGPLKGGILCEEDFHANGMVIESNYSCSKSNLTLVNSKNFHVNKLSTVQNPKKVQGLLAKRKSRPLNKVSLGGPTKNEIGQGDKIFPHNDFSCYKNSFEDENLFHVFNFLEQNPNAFCGPQAQAEVASWHLRGMTRRSFISKVNNSHITLKTQKKQKGDKLKVSTTVSKRRVTTRANSLPSLKKGVSLEDVSHRPVQNYIQRWLQNINPHPTFQPRKSAPVCKKERSVISRNNSQSSSGKGTNSQSSSGKGNHFVREGNKPVSKSAGLTGNNVGKKVDTSFDKDNSEERTEDLCERQVESLNDAYLLPLQENCALSQTAIDDHNSKIQVCAKNLGPDISLVYQEINLATKRHSVEAAIQVDLIEEDTPKDLLPVLLLRQLQDLVPSLPKTQNGVIEMPHSLADNPFPSPICKSYTNVLLAWLLVLTLKGSVNSFCQGDAHKTTNRTSEILALLEVLKQTAITEEADDLKAAVASLVESTTDHLRLTEKEQDMVPIGLSASCSTPSVQGVPEYAENANTQKLSSVDGYSASEDRASEVCVSEVTYSTREMCTVNKTYPKEACSLSDISLPVDGHSVDQTSMNKACFLGEVCSLTDAPSSDKACAYEENHVCETACPIDEAYVPNKDSNTSDFLNSKENICPDNLELTGQLERLDEVQKDLTILADPGYKNGFNVLVSNQNISNVSHCGFPLSETELEFGKEHSSLAEFKNHLLKKFQGQNAYTSSDREDSKTSEEPSSLTNSLTSSERSISELESFEELENQDTDIFNTKINAEEQAAEELIQKELKASKNLELVEVSSRNIIEEEKRNDVTRGTISRRLATLPSFVFCYDSKQNSEKELNEGETKMRVKMMVKSMESGSYSESSLDFKNCFTRPVTSDWSEFRQDSEKEQPPSDGPSGSCEEIAQEKGYSQGFVKRTIEKLYGKGEIIKPSFFPGSTHRSQVCPSNSVEFQCSRKVGFYNSEGQSLGSSDKLSSSSSILQKFPEEGQDKYDFNDMRANYHEGDIVGHGAKQSDHHRIARDLGEGILIDKGKWLLKENHLLRVSSPENSGLCGNADTTSVDTLLNNSTDIPYSHFGNLAPGPSMAELSSSELEELTQPLELKCSYFNMPHCSDSELFCEDLLDVQNKTCAKENIPNDNVEEKASHKSERVCTSVTHAFTSTGNKVHPVSDDTIKHQPLPGNNVIHGAHQEGDSLDKLYALCGQHCPILTVLIQPMNEKDRGFAYCKDSDIENFFSLPLWMKIHPYLLQSNKIMFRDENDKASGRKAFIDNVMDTFNQFYFNNIFD…
SIO_010081: RP1
subclass of: SO_0000673
so part of: RP1
location: join(6370912..6371529,6373131..6373302,6375626..6381261)
location: region:6370912-6381261:1
so has part: feature:6370912-6371529:1:exon
so has part: feature:6373131-6373302:1:exon
so has part: feature:6375626-6381261:1:exon

XP_029779803.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6370912-6371529:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6373131-6373302:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6375626-6381261:1:exon

LOC115279459
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115279459
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6417525..6455681
location: region:6417525-6455681:1
so has part: feature:6417525-6455681:1:exon
subclass of: SO_0000010

115279459
type: Gene
SIO_000068: ncbigene

position:6417525:1
position: 6417525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6455681:1
position: 6455681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6417525-6455681:1:exon

LOC115279459
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: LOC115279459
product: lipoxygenase homology domain-containing protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 75% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029924008.1
SIO_010081: LOC115279459
subclass of: SO_0000673
so part of: LOC115279459
location: join(6417525..6417642,6431724..6431875,6435949..6436027,6454193..6454268,6455122..6455198,6455303..6455334,6455502..6455681)
location: region:6417525-6455681:1
so has part: feature:6417525-6417642:1:exon
so has part: feature:6431724-6431875:1:exon
so has part: feature:6435949-6436027:1:exon
so has part: feature:6454193-6454268:1:exon
so has part: feature:6455122-6455198:1:exon
so has part: feature:6455303-6455334:1:exon
so has part: feature:6455502-6455681:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6417525-6417642:1:exon

position:6417642:1
position: 6417642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6431724-6431875:1:exon

position:6431724:1
position: 6431724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6431875:1
position: 6431875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6435949-6436027:1:exon

position:6435949:1
position: 6435949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6436027:1
position: 6436027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6454193-6454268:1:exon

position:6454193:1
position: 6454193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6454268:1
position: 6454268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6455122-6455198:1:exon

position:6455122:1
position: 6455122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6455198:1
position: 6455198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6455303-6455334:1:exon

position:6455303:1
position: 6455303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6455334:1
position: 6455334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6455502-6455681:1:exon

position:6455502:1
position: 6455502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115279459
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: LOC115279459
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lipoxygenase homology domain-containing protein 1-like
translation: MNSGKKFYIPVQRWLARDQEDGEICREFPVLNEGQPMLPVTVYEVHVATGELWNAGTVANVYISIYGEKGDSGSRQLFRSKSSFSFLRGQTDTFSLEAVHLGALYKIVIGHDGLGPGNGWFLDGVVIKDPTTNREYAFFCHRWLDQGEDDGKIARELYARDNSLIFVRQKLELNRKETWAAERWKFMKGNTLQFYNRLTGGFVRLHPDGTVDALGEKTDKYGKVIWQSRWCCGSFAN
SIO_010081: LOC115279459
subclass of: SO_0000673
so part of: LOC115279459
location: join(6417525..6417642,6431724..6431875,6435949..6436027,6454193..6454268,6455122..6455198,6455303..6455334,6455502..6455681)
location: region:6417525-6455681:1
so has part: feature:6417525-6417642:1:exon
so has part: feature:6431724-6431875:1:exon
so has part: feature:6435949-6436027:1:exon
so has part: feature:6454193-6454268:1:exon
so has part: feature:6455122-6455198:1:exon
so has part: feature:6455303-6455334:1:exon
so has part: feature:6455502-6455681:1:exon

XP_029779868.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6417525-6417642:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6431724-6431875:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6435949-6436027:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6454193-6454268:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6455122-6455198:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6455303-6455334:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6455502-6455681:1:exon

LOC115279462
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115279462
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6485436..6516761
location: region:6485436-6516761:1
so has part: feature:6485436-6516761:1:exon
subclass of: SO_0000010

115279462
type: Gene
SIO_000068: ncbigene

position:6485436:1
position: 6485436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6516761:1
position: 6516761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6485436-6516761:1:exon

LOC115279462
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: LOC115279462
product: uncharacterized LOC115279462
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 66% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029924010.1
SIO_010081: LOC115279462
subclass of: SO_0000673
so part of: LOC115279462
location: join(6485436..6485497,6487185..6487361,6490438..6490650,6506582..6506759,6515927..6516058,6516745..6516761)
location: region:6485436-6516761:1
so has part: feature:6485436-6485497:1:exon
so has part: feature:6487185-6487361:1:exon
so has part: feature:6490438-6490650:1:exon
so has part: feature:6506582-6506759:1:exon
so has part: feature:6515927-6516058:1:exon
so has part: feature:6516745-6516761:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6485436-6485497:1:exon

position:6485497:1
position: 6485497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6487185-6487361:1:exon

position:6487185:1
position: 6487185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6487361:1
position: 6487361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6490438-6490650:1:exon

position:6490438:1
position: 6490438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6490650:1
position: 6490650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6506582-6506759:1:exon

position:6506582:1
position: 6506582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6506759:1
position: 6506759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6515927-6516058:1:exon

position:6515927:1
position: 6515927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6516058:1
position: 6516058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6516745-6516761:1:exon

position:6516745:1
position: 6516745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115279462
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: LOC115279462
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115279462
translation: MASGGARTELRVLHQPSRCALLESARVPGHMVIFDRGGKIAAESSASYADLSKEFVVFVKGVFHSSAVVLLATSRCQALCLQPDGSCTGVGGQSEESYWKVHKISSGICMFESVKNAGMYLRIKDGHCDGIGTGHTDCHFKIKKNLENASISLESTNSPGLFVGLQSDGRAKPVIYTKNGNVFFYPQVIKFGRENPTSMSATPSQEEEKIHESKNQQETPPESEAKCSLLSSAANSNRK
SIO_010081: LOC115279462
subclass of: SO_0000673
so part of: LOC115279462
location: join(6485495..6485497,6487185..6487361,6490438..6490650,6506582..6506759,6515927..6516058,6516745..6516761)
location: region:6485495-6516761:1
so has part: feature:6485495-6485497:1:exon
so has part: feature:6487185-6487361:1:exon
so has part: feature:6490438-6490650:1:exon
so has part: feature:6506582-6506759:1:exon
so has part: feature:6515927-6516058:1:exon
so has part: feature:6516745-6516761:1:exon

XP_029779870.1
type: Protein
SIO_000068: ncbiprotein

position:6485495:1
position: 6485495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6485495-6485497:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6487185-6487361:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6490438-6490650:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6506582-6506759:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6515927-6516058:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6516745-6516761:1:exon

LOC115279135
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115279135
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6506681..6645379
location: region:6506681-6645379:1
so has part: feature:6506681-6645379:1:exon
subclass of: SO_0000010

115279135
type: Gene
SIO_000068: ncbigene

position:6506681:1
position: 6506681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6645379:1
position: 6645379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6506681-6645379:1:exon

LOC115279135
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: LOC115279135
product: lipoxygenase homology domain-containing protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029923679.1
SIO_010081: LOC115279135
subclass of: SO_0000673
so part of: LOC115279135
location: join(6506681..6506759,6515927..6516058,6528303..6528502,6532354..6532440,6548135..6548267,6548922..6549073,6552652..6552806,6563871..6563929,6564627..6564671,6577069..6577232,6617174..6617393,6632528..6632682,6637293..6637371,6640902..6641204,6645300..6645379)
location: region:6506681-6645379:1
so has part: feature:6506681-6506759:1:exon
so has part: feature:6515927-6516058:1:exon
so has part: feature:6528303-6528502:1:exon
so has part: feature:6532354-6532440:1:exon
so has part: feature:6548135-6548267:1:exon
so has part: feature:6548922-6549073:1:exon
so has part: feature:6552652-6552806:1:exon
so has part: feature:6563871-6563929:1:exon
so has part: feature:6564627-6564671:1:exon
so has part: feature:6577069-6577232:1:exon
so has part: feature:6617174-6617393:1:exon
so has part: feature:6632528-6632682:1:exon
so has part: feature:6637293-6637371:1:exon
so has part: feature:6640902-6641204:1:exon
so has part: feature:6645300-6645379:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6506681-6506759:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6515927-6516058:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6528303-6528502:1:exon

position:6528303:1
position: 6528303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6528502:1
position: 6528502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6532354-6532440:1:exon

position:6532354:1
position: 6532354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6532440:1
position: 6532440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6548135-6548267:1:exon

position:6548135:1
position: 6548135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6548267:1
position: 6548267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6548922-6549073:1:exon

position:6548922:1
position: 6548922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6549073:1
position: 6549073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6552652-6552806:1:exon

position:6552652:1
position: 6552652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6552806:1
position: 6552806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6563871-6563929:1:exon

position:6563871:1
position: 6563871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6563929:1
position: 6563929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6564627-6564671:1:exon

position:6564627:1
position: 6564627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6564671:1
position: 6564671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6577069-6577232:1:exon

position:6577069:1
position: 6577069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6577232:1
position: 6577232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6617174-6617393:1:exon

position:6617174:1
position: 6617174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6617393:1
position: 6617393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6632528-6632682:1:exon

position:6632528:1
position: 6632528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6632682:1
position: 6632682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6637293-6637371:1:exon

position:6637293:1
position: 6637293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6637371:1
position: 6637371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6640902-6641204:1:exon

position:6640902:1
position: 6640902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6641204:1
position: 6641204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6645300-6645379:1:exon

position:6645300:1
position: 6645300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115279135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: LOC115279135
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lipoxygenase homology domain-containing protein 1-like
translation: MRADGDTVCELPVVGEGQAGFPLVRYHVDIHTGQLRQAETESEVFLCLYGERGDSGLRLLDKSNMPVKFQRGQVDTFQVEAVSLGRLGKVLLRCEASDGSQYWYCEKVVVRDPGATAECIFTCERWLPFMSQGIIHSEIELYRQDMQIDHHPKIQEEANEGDWKVTIVTGDLENAGTTATVSLCVYGEVSCSGPIILGSGKYQLFNSNSADIFKVNLKDIGEIYKIRIGHDNSGPDPGWYLEDIRLENLDTRELLCLTVDAWIAENENDGDTSRERPVARTNKPALPVVVYEIYTYTGRQPGAETESNVLINLIGTRGDSGTRRLHQCKNNKVKFRRGQVDIFSIEAVSLGKLKKVLISHDGTGPVSSLAGTD
SIO_010081: LOC115279135
subclass of: SO_0000673
so part of: LOC115279135
location: join(6548201..6548267,6548922..6549073,6552652..6552806,6563871..6563929,6564627..6564671,6577069..6577232,6617174..6617393,6632528..6632682,6637293..6637371,6640902..6640927)
location: region:6548201-6640927:1
so has part: feature:6548201-6548267:1:exon
so has part: feature:6548922-6549073:1:exon
so has part: feature:6552652-6552806:1:exon
so has part: feature:6563871-6563929:1:exon
so has part: feature:6564627-6564671:1:exon
so has part: feature:6577069-6577232:1:exon
so has part: feature:6617174-6617393:1:exon
so has part: feature:6632528-6632682:1:exon
so has part: feature:6637293-6637371:1:exon
so has part: feature:6640902-6640927:1:exon

XP_029779539.1
type: Protein
SIO_000068: ncbiprotein

position:6548201:1
position: 6548201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6640927:1
position: 6640927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6548201-6548267:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6548922-6549073:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6552652-6552806:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6563871-6563929:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6564627-6564671:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6577069-6577232:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6617174-6617393:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6632528-6632682:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6637293-6637371:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6640902-6640927:1:exon

LOC115279559
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115279559
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(6738692..6738772)
location: region:6738692-6738772:-1
so has part: feature:6738692-6738772:-1:exon
subclass of: SO_0000578

115279559
type: Gene
SIO_000068: ncbigene

position:6738692:-1
position: 6738692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6738772:-1
position: 6738772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6738692-6738772:-1:exon

LOC115279559
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: snoRNA
gene: LOC115279559
product: small nucleolar RNA SNORD115
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00105
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003903512.1
SIO_010081: LOC115279559
subclass of: SO_0000673
so part of: LOC115279559
location: complement(6738692..6738772)
location: region:6738692-6738772:-1
so has part: feature:6738692-6738772:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6738692-6738772:-1:exon

LOC115278685
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115278685
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6766964..6787754)
location: region:6766964-6787754:-1
so has part: feature:6766964-6787754:-1:exon
subclass of: SO_0000011

115278685
type: Gene
SIO_000068: ncbigene

position:6766964:-1
position: 6766964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6787754:-1
position: 6787754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6766964-6787754:-1:exon

LOC115278685
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115278685
product: uncharacterized LOC115278685, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003903033.1
SIO_010081: LOC115278685
subclass of: SO_0000673
so part of: LOC115278685
location: complement(join(6766964..6766987,6781205..6781431,6781803..6781959,6787628..6787754))
location: region:6766964-6787754:-1
so has part: feature:6787628-6787754:-1:exon
so has part: feature:6781803-6781959:-1:exon
so has part: feature:6781205-6781431:-1:exon
so has part: feature:6766964-6766987:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6787628-6787754:-1:exon

position:6787628:-1
position: 6787628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6781803-6781959:-1:exon

position:6781803:-1
position: 6781803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6781959:-1
position: 6781959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6781205-6781431:-1:exon

position:6781205:-1
position: 6781205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6781431:-1
position: 6781431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6766964-6766987:-1:exon

position:6766987:-1
position: 6766987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115278685
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115278685
product: uncharacterized LOC115278685, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003903032.1
SIO_010081: LOC115278685
subclass of: SO_0000673
so part of: LOC115278685
location: complement(join(6780061..6780111,6781205..6781431,6781803..6781959,6787628..6787754))
location: region:6780061-6787754:-1
so has part: feature:6787628-6787754:-1:exon
so has part: feature:6781803-6781959:-1:exon
so has part: feature:6781205-6781431:-1:exon
so has part: feature:6780061-6780111:-1:exon

position:6780061:-1
position: 6780061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6787628-6787754:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6781803-6781959:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6781205-6781431:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6780061-6780111:-1:exon

position:6780111:-1
position: 6780111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115279074
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115279074
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6808547..6841384)
location: region:6808547-6841384:-1
so has part: feature:6808547-6841384:-1:exon
subclass of: SO_0000011

115279074
type: Gene
SIO_000068: ncbigene

position:6808547:-1
position: 6808547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6841384:-1
position: 6841384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6808547-6841384:-1:exon

LOC115279074
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115279074
product: uncharacterized LOC115279074, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003903189.1
SIO_010081: LOC115279074
subclass of: SO_0000673
so part of: LOC115279074
location: complement(join(6808547..6808675,6811252..6811460,6813942..6814093,6831737..6831786,6835472..6835607,6835968..6836084,6836817..6836976,6837639..6837834,6838838..6838972,6841224..6841384))
location: region:6808547-6841384:-1
so has part: feature:6841224-6841384:-1:exon
so has part: feature:6838838-6838972:-1:exon
so has part: feature:6837639-6837834:-1:exon
so has part: feature:6836817-6836976:-1:exon
so has part: feature:6835968-6836084:-1:exon
so has part: feature:6835472-6835607:-1:exon
so has part: feature:6831737-6831786:-1:exon
so has part: feature:6813942-6814093:-1:exon
so has part: feature:6811252-6811460:-1:exon
so has part: feature:6808547-6808675:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6841224-6841384:-1:exon

position:6841224:-1
position: 6841224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6838838-6838972:-1:exon

position:6838838:-1
position: 6838838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6838972:-1
position: 6838972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6837639-6837834:-1:exon

position:6837639:-1
position: 6837639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6837834:-1
position: 6837834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6836817-6836976:-1:exon

position:6836817:-1
position: 6836817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6836976:-1
position: 6836976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6835968-6836084:-1:exon

position:6835968:-1
position: 6835968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6836084:-1
position: 6836084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6835472-6835607:-1:exon

position:6835472:-1
position: 6835472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6835607:-1
position: 6835607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6831737-6831786:-1:exon

position:6831737:-1
position: 6831737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6831786:-1
position: 6831786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6813942-6814093:-1:exon

position:6813942:-1
position: 6813942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6814093:-1
position: 6814093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6811252-6811460:-1:exon

position:6811252:-1
position: 6811252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6811460:-1
position: 6811460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6808547-6808675:-1:exon

position:6808675:-1
position: 6808675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115279074
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115279074
product: uncharacterized LOC115279074, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003903186.1
SIO_010081: LOC115279074
subclass of: SO_0000673
so part of: LOC115279074
location: complement(join(6808547..6808675,6809903..6810979,6811252..6811460,6813942..6814093,6831737..6831786,6835472..6835607,6835968..6836084,6836817..6836976,6837639..6837834,6838838..6838972,6841224..6841384))
location: region:6808547-6841384:-1
so has part: feature:6841224-6841384:-1:exon
so has part: feature:6838838-6838972:-1:exon
so has part: feature:6837639-6837834:-1:exon
so has part: feature:6836817-6836976:-1:exon
so has part: feature:6835968-6836084:-1:exon
so has part: feature:6835472-6835607:-1:exon
so has part: feature:6831737-6831786:-1:exon
so has part: feature:6813942-6814093:-1:exon
so has part: feature:6811252-6811460:-1:exon
so has part: feature:6809903-6810979:-1:exon
so has part: feature:6808547-6808675:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6841224-6841384:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6838838-6838972:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6837639-6837834:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6836817-6836976:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6835968-6836084:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6835472-6835607:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6831737-6831786:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6813942-6814093:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6811252-6811460:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6809903-6810979:-1:exon

position:6809903:-1
position: 6809903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6810979:-1
position: 6810979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6808547-6808675:-1:exon

LOC115279074
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115279074
product: uncharacterized LOC115279074, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003903188.1
SIO_010081: LOC115279074
subclass of: SO_0000673
so part of: LOC115279074
location: complement(join(6809462..6810146,6811252..6811460,6813942..6814093,6831737..6831786,6835472..6835607,6835968..6836084,6836817..6836976,6837639..6837834,6838838..6838972,6841224..6841384))
location: region:6809462-6841384:-1
so has part: feature:6841224-6841384:-1:exon
so has part: feature:6838838-6838972:-1:exon
so has part: feature:6837639-6837834:-1:exon
so has part: feature:6836817-6836976:-1:exon
so has part: feature:6835968-6836084:-1:exon
so has part: feature:6835472-6835607:-1:exon
so has part: feature:6831737-6831786:-1:exon
so has part: feature:6813942-6814093:-1:exon
so has part: feature:6811252-6811460:-1:exon
so has part: feature:6809462-6810146:-1:exon

position:6809462:-1
position: 6809462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6841224-6841384:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6838838-6838972:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6837639-6837834:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6836817-6836976:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6835968-6836084:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6835472-6835607:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6831737-6831786:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6813942-6814093:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6811252-6811460:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6809462-6810146:-1:exon

position:6810146:-1
position: 6810146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115279074
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115279074
product: uncharacterized LOC115279074, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003903185.1
SIO_010081: LOC115279074
subclass of: SO_0000673
so part of: LOC115279074
location: complement(join(6810420..6810979,6811252..6811460,6813942..6814093,6831737..6831786,6835472..6835607,6835968..6836084,6836817..6836976,6837639..6837831,6838838..6838972,6841224..6841384))
location: region:6810420-6841384:-1
so has part: feature:6841224-6841384:-1:exon
so has part: feature:6838838-6838972:-1:exon
so has part: feature:6837639-6837831:-1:exon
so has part: feature:6836817-6836976:-1:exon
so has part: feature:6835968-6836084:-1:exon
so has part: feature:6835472-6835607:-1:exon
so has part: feature:6831737-6831786:-1:exon
so has part: feature:6813942-6814093:-1:exon
so has part: feature:6811252-6811460:-1:exon
so has part: feature:6810420-6810979:-1:exon

position:6810420:-1
position: 6810420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6841224-6841384:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6838838-6838972:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6837639-6837831:-1:exon

position:6837831:-1
position: 6837831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6836817-6836976:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6835968-6836084:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6835472-6835607:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6831737-6831786:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6813942-6814093:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6811252-6811460:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6810420-6810979:-1:exon

LOC115279074
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115279074
product: uncharacterized LOC115279074, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003903187.1
SIO_010081: LOC115279074
subclass of: SO_0000673
so part of: LOC115279074
location: complement(join(6810420..6810979,6811252..6811460,6813942..6814093,6831737..6831786,6835472..6835607,6835968..6836084,6836817..6836976,6837639..6837834,6838838..6838972,6841177..6841229))
location: region:6810420-6841229:-1
so has part: feature:6841177-6841229:-1:exon
so has part: feature:6838838-6838972:-1:exon
so has part: feature:6837639-6837834:-1:exon
so has part: feature:6836817-6836976:-1:exon
so has part: feature:6835968-6836084:-1:exon
so has part: feature:6835472-6835607:-1:exon
so has part: feature:6831737-6831786:-1:exon
so has part: feature:6813942-6814093:-1:exon
so has part: feature:6811252-6811460:-1:exon
so has part: feature:6810420-6810979:-1:exon

position:6841229:-1
position: 6841229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6841177-6841229:-1:exon

position:6841177:-1
position: 6841177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6838838-6838972:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6837639-6837834:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6836817-6836976:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6835968-6836084:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6835472-6835607:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6831737-6831786:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6813942-6814093:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6811252-6811460:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6810420-6810979:-1:exon

LOC115279074
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115279074
product: uncharacterized LOC115279074, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003903190.1
SIO_010081: LOC115279074
subclass of: SO_0000673
so part of: LOC115279074
location: complement(join(6825599..6826285,6831737..6831786,6835472..6835607,6835968..6836084,6836817..6836976,6837639..6837834,6838838..6838972,6841224..6841384))
location: region:6825599-6841384:-1
so has part: feature:6841224-6841384:-1:exon
so has part: feature:6838838-6838972:-1:exon
so has part: feature:6837639-6837834:-1:exon
so has part: feature:6836817-6836976:-1:exon
so has part: feature:6835968-6836084:-1:exon
so has part: feature:6835472-6835607:-1:exon
so has part: feature:6831737-6831786:-1:exon
so has part: feature:6825599-6826285:-1:exon

position:6825599:-1
position: 6825599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6841224-6841384:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6838838-6838972:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6837639-6837834:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6836817-6836976:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6835968-6836084:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6835472-6835607:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6831737-6831786:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6825599-6826285:-1:exon

position:6826285:-1
position: 6826285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

XKR4
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: XKR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6844946..7256936
location: region:6844946-7256936:1
so has part: feature:6844946-7256936:1:exon
subclass of: SO_0000010

115279463
type: Gene
SIO_000068: ncbigene

position:6844946:1
position: 6844946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7256936:1
position: 7256936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6844946-7256936:1:exon

XKR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: XKR4
product: XK related 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 45% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029924011.1
SIO_010081: XKR4
subclass of: SO_0000673
so part of: XKR4
location: join(6844946..6845001,6845647..6846729,6846832..6847395,7099929..7100128,7255990..7256936)
location: region:6844946-7256936:1
so has part: feature:6844946-6845001:1:exon
so has part: feature:6845647-6846729:1:exon
so has part: feature:6846832-6847395:1:exon
so has part: feature:7099929-7100128:1:exon
so has part: feature:7255990-7256936:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6844946-6845001:1:exon

position:6845001:1
position: 6845001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6845647-6846729:1:exon

position:6845647:1
position: 6845647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6846729:1
position: 6846729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6846832-6847395:1:exon

position:6846832:1
position: 6846832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6847395:1
position: 6847395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7099929-7100128:1:exon

position:7099929:1
position: 7099929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7100128:1
position: 7100128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7255990-7256936:1:exon

position:7255990:1
position: 7255990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

XKR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: XKR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: XK-related protein 4
translation: MLMGYVAQHPPATQSGKSKGGGANSRLRHSRPAGRYTVSRVGLPRPASPRRREQPPGVLRCPPGGGEGGGRPPGSPLPQARQLPGGGERVGRAGRAAWAWVAEGAGPPPCLPAGVHRRSSARTLPRGRGLGLPADPPTHRSTPGAAVPRSSRRLCRPCTPSPFSALPRPGTPTAAASVRGPPVRVTPRLPNGRQTQLHTQPWSRYPHIRAQYKEACAPEPSPPPRPPVPTLLRPPPGLEAETPPLGAPLPLPLCRSNPPSVPRNPVSWGPSAVPLRPLGPCSRPPGPAGRPPPTAAASFGPGPSSGALLLPRPSRAGVGAAAAGREGMRSSSPSESAGGGEEAGGGSAHEGRRGMCRSEERRGGRCCSCCWRRRRLGRQPGVGGSGGSGAGSAALCLRLGREQRRYSLWDCLWILAAVAVYFADVGTDIWLAVDYYLRGQRWWFGLTLFFVVLGSLSVQVFSFRWFVHDFSTEDSATTAAASSCQQPGADCKTVASSGAAAAEGEARPSTPQRQASNASKTNIPATNSGSNSSGATRASGKHRSASCSFCIWLLQSLIHILQLGQIWRYFHTIYLGIRSRQSGENDRWRFYWKMVYEYADVSMLHLLATFLESAPQLVLQLCIIVQTHSLQALQGFTAAASLVSLAWALASYQKALRDSRDDKKPISYMAVVIQFCWHFFTIAARVITFALFASVFQLYFGIFIVLHWCIMTFWIVHCETEFCITKWEEIVFDMVVGIIYIFSWFNVKEGRTRCRLFIYYFVILLENTALSALWYLYKAPQIADAFAIPALCVVFSSFLTGVVFMLMYYAFFHPNGPRFGQSPSCACEDPVAAFTLPPEVATSTLRSISNNRSVASDRDQKFAERDGCVPVFQVRPTAPSTPSSRPPRIEESVIKIDLFRNRYPAWERHVLDRSLRKAILAFECSPSPPRLQYKDDALIQERLEYETTL
SIO_010081: XKR4
subclass of: SO_0000673
so part of: XKR4
location: join(6844946..6845001,6845647..6846729,6846832..6847395,7099929..7100128,7255990..7256936)
location: region:6844946-7256936:1
so has part: feature:6844946-6845001:1:exon
so has part: feature:6845647-6846729:1:exon
so has part: feature:6846832-6847395:1:exon
so has part: feature:7099929-7100128:1:exon
so has part: feature:7255990-7256936:1:exon

XP_029779871.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6844946-6845001:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6845647-6846729:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6846832-6847395:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7099929-7100128:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7255990-7256936:1:exon

LOC115279343
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115279343
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6876377..6883497)
location: region:6876377-6883497:-1
so has part: feature:6876377-6883497:-1:exon
subclass of: SO_0000011

115279343
type: Gene
SIO_000068: ncbigene

position:6876377:-1
position: 6876377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6883497:-1
position: 6883497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6876377-6883497:-1:exon

LOC115279343
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115279343
product: uncharacterized LOC115279343
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003903378.1
SIO_010081: LOC115279343
subclass of: SO_0000673
so part of: LOC115279343
location: complement(join(6876377..6876684,6883378..6883497))
location: region:6876377-6883497:-1
so has part: feature:6883378-6883497:-1:exon
so has part: feature:6876377-6876684:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6883378-6883497:-1:exon

position:6883378:-1
position: 6883378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6876377-6876684:-1:exon

position:6876684:-1
position: 6876684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115279341
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115279341
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6906255..6908803)
location: region:6906255-6908803:-1
so has part: feature:6906255-6908803:-1:exon
subclass of: SO_0000011

115279341
type: Gene
SIO_000068: ncbigene

position:6906255:-1
position: 6906255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6908803:-1
position: 6908803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6906255-6908803:-1:exon

LOC115279341
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115279341
product: uncharacterized LOC115279341
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003903377.1
SIO_010081: LOC115279341
subclass of: SO_0000673
so part of: LOC115279341
location: complement(join(6906255..6906832,6908579..6908803))
location: region:6906255-6908803:-1
so has part: feature:6908579-6908803:-1:exon
so has part: feature:6906255-6906832:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6908579-6908803:-1:exon

position:6908579:-1
position: 6908579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6906255-6906832:-1:exon

position:6906832:-1
position: 6906832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115279340
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115279340
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7015278..7017008)
location: region:7015278-7017008:-1
so has part: feature:7015278-7017008:-1:exon
subclass of: SO_0000011

115279340
type: Gene
SIO_000068: ncbigene

position:7015278:-1
position: 7015278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7017008:-1
position: 7017008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7015278-7017008:-1:exon

LOC115279340
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115279340
product: uncharacterized LOC115279340
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003903376.1
SIO_010081: LOC115279340
subclass of: SO_0000673
so part of: LOC115279340
location: complement(join(7015278..7016308,7016920..7017008))
location: region:7015278-7017008:-1
so has part: feature:7016920-7017008:-1:exon
so has part: feature:7015278-7016308:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7016920-7017008:-1:exon

position:7016920:-1
position: 7016920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7015278-7016308:-1:exon

position:7016308:-1
position: 7016308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115279532
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115279532
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7325747..7342134)
location: region:7325747-7342134:-1
so has part: feature:7325747-7342134:-1:exon
subclass of: SO_0000011

115279532
type: Gene
SIO_000068: ncbigene

position:7325747:-1
position: 7325747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7342134:-1
position: 7342134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7325747-7342134:-1:exon

LOC115279532
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115279532
product: uncharacterized LOC115279532
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003903495.1
SIO_010081: LOC115279532
subclass of: SO_0000673
so part of: LOC115279532
location: complement(join(7325747..7326282,7330960..7331019,7342058..7342134))
location: region:7325747-7342134:-1
so has part: feature:7342058-7342134:-1:exon
so has part: feature:7330960-7331019:-1:exon
so has part: feature:7325747-7326282:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7342058-7342134:-1:exon

position:7342058:-1
position: 7342058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7330960-7331019:-1:exon

position:7330960:-1
position: 7330960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7331019:-1
position: 7331019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7325747-7326282:-1:exon

position:7326282:-1
position: 7326282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM68
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: TMEM68
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7369772..7418076)
location: region:7369772-7418076:-1
so has part: feature:7369772-7418076:-1:exon
subclass of: SO_0000010

115279042
type: Gene
SIO_000068: ncbigene

position:7369772:-1
position: 7369772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7418076:-1
position: 7418076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7369772-7418076:-1:exon

TMEM68
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: TMEM68
product: transmembrane protein 68, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_029923567.1
SIO_010081: TMEM68
subclass of: SO_0000673
so part of: TMEM68
location: complement(join(7369772..7371084,7383581..7383720,7385405..7385465,7390290..7390483,7392971..7393138,7417820..7418076))
location: region:7369772-7418076:-1
so has part: feature:7417820-7418076:-1:exon
so has part: feature:7392971-7393138:-1:exon
so has part: feature:7390290-7390483:-1:exon
so has part: feature:7385405-7385465:-1:exon
so has part: feature:7383581-7383720:-1:exon
so has part: feature:7369772-7371084:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7417820-7418076:-1:exon

position:7417820:-1
position: 7417820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7392971-7393138:-1:exon

position:7392971:-1
position: 7392971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7393138:-1
position: 7393138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7390290-7390483:-1:exon

position:7390290:-1
position: 7390290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7390483:-1
position: 7390483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7385405-7385465:-1:exon

position:7385405:-1
position: 7385405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7385465:-1
position: 7385465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7383581-7383720:-1:exon

position:7383581:-1
position: 7383581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7383720:-1
position: 7383720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7369772-7371084:-1:exon

position:7371084:-1
position: 7371084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM68
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: TMEM68
product: transmembrane protein 68, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_029923561.1
SIO_010081: TMEM68
subclass of: SO_0000673
so part of: TMEM68
location: complement(join(7369772..7371084,7383581..7383720,7385405..7385465,7390290..7390483,7392971..7393138,7407831..7408224,7417820..7418076))
location: region:7369772-7418076:-1
so has part: feature:7417820-7418076:-1:exon
so has part: feature:7407831-7408224:-1:exon
so has part: feature:7392971-7393138:-1:exon
so has part: feature:7390290-7390483:-1:exon
so has part: feature:7385405-7385465:-1:exon
so has part: feature:7383581-7383720:-1:exon
so has part: feature:7369772-7371084:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7417820-7418076:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7407831-7408224:-1:exon

position:7407831:-1
position: 7407831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7408224:-1
position: 7408224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7392971-7393138:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7390290-7390483:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7385405-7385465:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7383581-7383720:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7369772-7371084:-1:exon

TMEM68
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: TMEM68
product: transmembrane protein 68, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_029923563.1
SIO_010081: TMEM68
subclass of: SO_0000673
so part of: TMEM68
location: complement(join(7369772..7371084,7383581..7383720,7392971..7393138,7407831..7408224,7409294..7409338,7417820..7418076))
location: region:7369772-7418076:-1
so has part: feature:7417820-7418076:-1:exon
so has part: feature:7409294-7409338:-1:exon
so has part: feature:7407831-7408224:-1:exon
so has part: feature:7392971-7393138:-1:exon
so has part: feature:7383581-7383720:-1:exon
so has part: feature:7369772-7371084:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7417820-7418076:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7409294-7409338:-1:exon

position:7409294:-1
position: 7409294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7409338:-1
position: 7409338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7407831-7408224:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7392971-7393138:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7383581-7383720:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7369772-7371084:-1:exon

TMEM68
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: TMEM68
product: transmembrane protein 68, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_029923560.1
SIO_010081: TMEM68
subclass of: SO_0000673
so part of: TMEM68
location: complement(join(7369772..7371084,7383581..7383720,7385405..7385465,7390290..7390483,7392971..7393138,7407831..7408224,7409294..7409338,7417820..7418076))
location: region:7369772-7418076:-1
so has part: feature:7417820-7418076:-1:exon
so has part: feature:7409294-7409338:-1:exon
so has part: feature:7407831-7408224:-1:exon
so has part: feature:7392971-7393138:-1:exon
so has part: feature:7390290-7390483:-1:exon
so has part: feature:7385405-7385465:-1:exon
so has part: feature:7383581-7383720:-1:exon
so has part: feature:7369772-7371084:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7417820-7418076:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7409294-7409338:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7407831-7408224:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7392971-7393138:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7390290-7390483:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7385405-7385465:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7383581-7383720:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7369772-7371084:-1:exon

TMEM68
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: TMEM68
product: transmembrane protein 68, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_029923564.1
SIO_010081: TMEM68
subclass of: SO_0000673
so part of: TMEM68
location: complement(join(7369772..7371084,7383581..7383720,7385405..7385465,7390290..7390483,7392971..7393138,7400469..7400532))
location: region:7369772-7400532:-1
so has part: feature:7400469-7400532:-1:exon
so has part: feature:7392971-7393138:-1:exon
so has part: feature:7390290-7390483:-1:exon
so has part: feature:7385405-7385465:-1:exon
so has part: feature:7383581-7383720:-1:exon
so has part: feature:7369772-7371084:-1:exon

position:7400532:-1
position: 7400532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7400469-7400532:-1:exon

position:7400469:-1
position: 7400469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7392971-7393138:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7390290-7390483:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7385405-7385465:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7383581-7383720:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7369772-7371084:-1:exon

TMEM68
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: TMEM68
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 68 isoform X3
translation: MIDKNQTCGIGQDSMPYMSCLIHVLEEWFGVEHLEDYLNFANYLLWVFTPLILLILPYFTIFLLYVTIIFLHIYKRKNVLKEAYSHNLWDGARKTVATLWDGHAAVWHGYEVHGMEKIPEEGPALIIFYHGAIPIDFYYFMAKIFIHKGRTCRVVADHFVFKIPGLFRWLYEKFRYPFAPMYGGFPVKLRTYLGDPIPYDPKITAEELAEKTKNAVQALIDKHQRIPGNIMSALLERFHRKQKINSKAT
SIO_010081: TMEM68
subclass of: SO_0000673
so part of: TMEM68
location: complement(join(7370968..7371084,7383581..7383720,7392971..7393138,7407831..7408155))
location: region:7370968-7408155:-1
so has part: feature:7407831-7408155:-1:exon
so has part: feature:7392971-7393138:-1:exon
so has part: feature:7383581-7383720:-1:exon
so has part: feature:7370968-7371084:-1:exon

XP_029779423.1
type: Protein
SIO_000068: ncbiprotein

position:7370968:-1
position: 7370968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7408155:-1
position: 7408155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7407831-7408155:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7392971-7393138:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7383581-7383720:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7370968-7371084:-1:exon

TMEM68
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: TMEM68
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 68 isoform X1
translation: MIDKNQTCGIGQDSMPYMSCLIHVLEEWFGVEHLEDYLNFANYLLWVFTPLILLILPYFTIFLLYVTIIFLHIYKRKNVLKEAYSHNLWDGARKTVATLWDGHAAVWHGYEVHGMEKIPEEGPALIIFYHGAIPIDFYYFMAKIFIHKGRTCRVVADHFVFKIPGFSLLLDVFCALHGPREKCVEILRSGHLLAISPGGVREALISDETYNIIWGNRKGFAQVAIDAKVPIIPMFTQNIREGFRSLGGTRLFRWLYEKFRYPFAPMYGGFPVKLRTYLGDPIPYDPKITAEELAEKTKNAVQALIDKHQRIPGNIMSALLERFHRKQKINSKAT
SIO_010081: TMEM68
subclass of: SO_0000673
so part of: TMEM68
location: complement(join(7370968..7371084,7383581..7383720,7385405..7385465,7390290..7390483,7392971..7393138,7407831..7408155))
location: region:7370968-7408155:-1
so has part: feature:7407831-7408155:-1:exon
so has part: feature:7392971-7393138:-1:exon
so has part: feature:7390290-7390483:-1:exon
so has part: feature:7385405-7385465:-1:exon
so has part: feature:7383581-7383720:-1:exon
so has part: feature:7370968-7371084:-1:exon

XP_029779420.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7407831-7408155:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7392971-7393138:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7390290-7390483:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7385405-7385465:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7383581-7383720:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7370968-7371084:-1:exon

TMEM68
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: TMEM68
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 68 isoform X1
translation: MIDKNQTCGIGQDSMPYMSCLIHVLEEWFGVEHLEDYLNFANYLLWVFTPLILLILPYFTIFLLYVTIIFLHIYKRKNVLKEAYSHNLWDGARKTVATLWDGHAAVWHGYEVHGMEKIPEEGPALIIFYHGAIPIDFYYFMAKIFIHKGRTCRVVADHFVFKIPGFSLLLDVFCALHGPREKCVEILRSGHLLAISPGGVREALISDETYNIIWGNRKGFAQVAIDAKVPIIPMFTQNIREGFRSLGGTRLFRWLYEKFRYPFAPMYGGFPVKLRTYLGDPIPYDPKITAEELAEKTKNAVQALIDKHQRIPGNIMSALLERFHRKQKINSKAT
SIO_010081: TMEM68
subclass of: SO_0000673
so part of: TMEM68
location: complement(join(7370968..7371084,7383581..7383720,7385405..7385465,7390290..7390483,7392971..7393138,7407831..7408155))
location: region:7370968-7408155:-1
so has part: feature:7407831-7408155:-1:exon
so has part: feature:7392971-7393138:-1:exon
so has part: feature:7390290-7390483:-1:exon
so has part: feature:7385405-7385465:-1:exon
so has part: feature:7383581-7383720:-1:exon
so has part: feature:7370968-7371084:-1:exon

XP_029779421.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7407831-7408155:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7392971-7393138:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7390290-7390483:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7385405-7385465:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7383581-7383720:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7370968-7371084:-1:exon

TMEM68
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: TMEM68
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 68 isoform X4
translation: MPSKSILVTNGVKSSFFLIGYEVHGMEKIPEEGPALIIFYHGAIPIDFYYFMAKIFIHKGRTCRVVADHFVFKIPGFSLLLDVFCALHGPREKCVEILRSGHLLAISPGGVREALISDETYNIIWGNRKGFAQVAIDAKVPIIPMFTQNIREGFRSLGGTRLFRWLYEKFRYPFAPMYGGFPVKLRTYLGDPIPYDPKITAEELAEKTKNAVQALIDKHQRIPGNIMSALLERFHRKQKINSKAT
SIO_010081: TMEM68
subclass of: SO_0000673
so part of: TMEM68
location: complement(join(7370968..7371084,7383581..7383720,7385405..7385465,7390290..7390483,7392971..7393138,7400469..7400526))
location: region:7370968-7400526:-1
so has part: feature:7400469-7400526:-1:exon
so has part: feature:7392971-7393138:-1:exon
so has part: feature:7390290-7390483:-1:exon
so has part: feature:7385405-7385465:-1:exon
so has part: feature:7383581-7383720:-1:exon
so has part: feature:7370968-7371084:-1:exon

XP_029779424.1
type: Protein
SIO_000068: ncbiprotein

position:7400526:-1
position: 7400526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7400469-7400526:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7392971-7393138:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7390290-7390483:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7385405-7385465:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7383581-7383720:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7370968-7371084:-1:exon

TMEM68
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: TMEM68
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 68 isoform X6
translation: MEKIPEEGPALIIFYHGAIPIDFYYFMAKIFIHKGRTCRVVADHFVFKIPGFSLLLDVFCALHGPREKCVEILRSGHLLAISPGGVREALISDETYNIIWGNRKGFAQVAIDAKVPIIPMFTQNIREGFRSLGGTRLFRWLYEKFRYPFAPMYGGFPVKLRTYLGDPIPYDPKITAEELAEKTKNAVQALIDKHQRIPGNIMSALLERFHRKQKINSKAT
SIO_010081: TMEM68
subclass of: SO_0000673
so part of: TMEM68
location: complement(join(7370968..7371084,7383581..7383720,7385405..7385465,7390290..7390483,7392971..7393121))
location: region:7370968-7393121:-1
so has part: feature:7392971-7393121:-1:exon
so has part: feature:7390290-7390483:-1:exon
so has part: feature:7385405-7385465:-1:exon
so has part: feature:7383581-7383720:-1:exon
so has part: feature:7370968-7371084:-1:exon

XP_029779427.1
type: Protein
SIO_000068: ncbiprotein

position:7393121:-1
position: 7393121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7392971-7393121:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7390290-7390483:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7385405-7385465:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7383581-7383720:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7370968-7371084:-1:exon

TMEM68
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: TMEM68
product: transmembrane protein 68, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_029923562.1
SIO_010081: TMEM68
subclass of: SO_0000673
so part of: TMEM68
location: complement(join(7385406..7385465,7388017..7388139,7390290..7390483,7392971..7393138,7407831..7408224,7409294..7409338,7417820..7418076))
location: region:7385406-7418076:-1
so has part: feature:7417820-7418076:-1:exon
so has part: feature:7409294-7409338:-1:exon
so has part: feature:7407831-7408224:-1:exon
so has part: feature:7392971-7393138:-1:exon
so has part: feature:7390290-7390483:-1:exon
so has part: feature:7388017-7388139:-1:exon
so has part: feature:7385406-7385465:-1:exon

position:7385406:-1
position: 7385406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7417820-7418076:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7409294-7409338:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7407831-7408224:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7392971-7393138:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7390290-7390483:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7388017-7388139:-1:exon

position:7388017:-1
position: 7388017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7388139:-1
position: 7388139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7385406-7385465:-1:exon

TMEM68
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: TMEM68
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 68 isoform X2
translation: MIDKNQTCGIGQDSMPYMSCLIHVLEEWFGVEHLEDYLNFANYLLWVFTPLILLILPYFTIFLLYVTIIFLHIYKRKNVLKEAYSHNLWDGARKTVATLWDGHAAVWHGYEVHGMEKIPEEGPALIIFYHGAIPIDFYYFMAKIFIHKGRTCRVVADHFVFKIPGFSLLLDVFCALHGPREKCVEILRSGHLLAISPGGVREALISDETYNIIWGNRKGFAQVAIDAKVMRQLRHREMEGRRARVAQRGRRRAEQDCRPLCPCRP
SIO_010081: TMEM68
subclass of: SO_0000673
so part of: TMEM68
location: complement(join(7388029..7388139,7390290..7390483,7392971..7393138,7407831..7408155))
location: region:7388029-7408155:-1
so has part: feature:7407831-7408155:-1:exon
so has part: feature:7392971-7393138:-1:exon
so has part: feature:7390290-7390483:-1:exon
so has part: feature:7388029-7388139:-1:exon

XP_029779422.1
type: Protein
SIO_000068: ncbiprotein

position:7388029:-1
position: 7388029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7407831-7408155:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7392971-7393138:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7390290-7390483:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7388029-7388139:-1:exon

TMEM68
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: TMEM68
product: transmembrane protein 68, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_029923566.1
SIO_010081: TMEM68
subclass of: SO_0000673
so part of: TMEM68
location: complement(join(7388916..7389539,7390290..7390483,7392971..7393138,7407831..7408224,7409294..7409338,7417820..7418076))
location: region:7388916-7418076:-1
so has part: feature:7417820-7418076:-1:exon
so has part: feature:7409294-7409338:-1:exon
so has part: feature:7407831-7408224:-1:exon
so has part: feature:7392971-7393138:-1:exon
so has part: feature:7390290-7390483:-1:exon
so has part: feature:7388916-7389539:-1:exon

position:7388916:-1
position: 7388916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7417820-7418076:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7409294-7409338:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7407831-7408224:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7392971-7393138:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7390290-7390483:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7388916-7389539:-1:exon

position:7389539:-1
position: 7389539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM68
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: TMEM68
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 68 isoform X5
translation: MIDKNQTCGIGQDSMPYMSCLIHVLEEWFGVEHLEDYLNFANYLLWVFTPLILLILPYFTIFLLYVTIIFLHIYKRKNVLKEAYSHNLWDGARKTVATLWDGHAAVWHGYEVHGMEKIPEEGPALIIFYHGAIPIDFYYFMAKIFIHKGRTCRVVADHFVFKIPGFSLLLDVFCALHGPREKCVEILRSGHLLAISPGGVREALISDETYNIIWGNRKGFAQVAIDAKVIVCQKKTQ
SIO_010081: TMEM68
subclass of: SO_0000673
so part of: TMEM68
location: complement(join(7389513..7389539,7390290..7390483,7392971..7393138,7407831..7408155))
location: region:7389513-7408155:-1
so has part: feature:7407831-7408155:-1:exon
so has part: feature:7392971-7393138:-1:exon
so has part: feature:7390290-7390483:-1:exon
so has part: feature:7389513-7389539:-1:exon

XP_029779426.1
type: Protein
SIO_000068: ncbiprotein

position:7389513:-1
position: 7389513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7407831-7408155:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7392971-7393138:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7390290-7390483:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7389513-7389539:-1:exon

TGS1
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: TGS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7418137..7459780
location: region:7418137-7459780:1
so has part: feature:7418137-7459780:1:exon
subclass of: SO_0000010

115279073
type: Gene
SIO_000068: ncbigene

position:7418137:1
position: 7418137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7459780:1
position: 7459780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7418137-7459780:1:exon

TGS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: TGS1
product: trimethylguanosine synthase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_029923599.1
SIO_010081: TGS1
subclass of: SO_0000673
so part of: TGS1
location: join(7418137..7418427,7425357..7425421,7427627..7427787,7428393..7429218,7431434..7431551,7432982..7433068,7435158..7435332,7437356..7437647,7438966..7439124,7441695..7441838,7445364..7445580,7446446..7446524,7458662..7459780)
location: region:7418137-7459780:1
so has part: feature:7418137-7418427:1:exon
so has part: feature:7425357-7425421:1:exon
so has part: feature:7427627-7427787:1:exon
so has part: feature:7428393-7429218:1:exon
so has part: feature:7431434-7431551:1:exon
so has part: feature:7432982-7433068:1:exon
so has part: feature:7435158-7435332:1:exon
so has part: feature:7437356-7437647:1:exon
so has part: feature:7438966-7439124:1:exon
so has part: feature:7441695-7441838:1:exon
so has part: feature:7445364-7445580:1:exon
so has part: feature:7446446-7446524:1:exon
so has part: feature:7458662-7459780:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7418137-7418427:1:exon

position:7418427:1
position: 7418427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7425357-7425421:1:exon

position:7425357:1
position: 7425357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7425421:1
position: 7425421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7427627-7427787:1:exon

position:7427627:1
position: 7427627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7427787:1
position: 7427787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7428393-7429218:1:exon

position:7428393:1
position: 7428393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7429218:1
position: 7429218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7431434-7431551:1:exon

position:7431434:1
position: 7431434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7431551:1
position: 7431551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7432982-7433068:1:exon

position:7432982:1
position: 7432982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7433068:1
position: 7433068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7435158-7435332:1:exon

position:7435158:1
position: 7435158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7435332:1
position: 7435332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7437356-7437647:1:exon

position:7437356:1
position: 7437356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7437647:1
position: 7437647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7438966-7439124:1:exon

position:7438966:1
position: 7438966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7439124:1
position: 7439124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7441695-7441838:1:exon

position:7441695:1
position: 7441695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7441838:1
position: 7441838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7445364-7445580:1:exon

position:7445364:1
position: 7445364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7445580:1
position: 7445580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7446446-7446524:1:exon

position:7446446:1
position: 7446446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7446524:1
position: 7446524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7458662-7459780:1:exon

position:7458662:1
position: 7458662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TGS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: TGS1
product: trimethylguanosine synthase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_029923600.1
SIO_010081: TGS1
subclass of: SO_0000673
so part of: TGS1
location: join(7418137..7418427,7425357..7425421,7427627..7427787,7428393..7429218,7431434..7431551,7432982..7433068,7435158..7435332,7437356..7437647,7438966..7439124,7458662..7459780)
location: region:7418137-7459780:1
so has part: feature:7418137-7418427:1:exon
so has part: feature:7425357-7425421:1:exon
so has part: feature:7427627-7427787:1:exon
so has part: feature:7428393-7429218:1:exon
so has part: feature:7431434-7431551:1:exon
so has part: feature:7432982-7433068:1:exon
so has part: feature:7435158-7435332:1:exon
so has part: feature:7437356-7437647:1:exon
so has part: feature:7438966-7439124:1:exon
so has part: feature:7458662-7459780:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7418137-7418427:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7425357-7425421:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7427627-7427787:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7428393-7429218:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7431434-7431551:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7432982-7433068:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7435158-7435332:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7437356-7437647:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7438966-7439124:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7458662-7459780:1:exon

TGS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: TGS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trimethylguanosine synthase isoform X1
translation: MCCEKWSRVAEMFLFIEDLEEDSKILCLCSRAFVEDRKLCNLGLKGYYIKGNGDNAGDQATEEEEGGTAESHDSKGVGLDEGELDSEAELMRSMGLPLQFGGMSAHKNFEVSMNTRNKVKIKKKKKKHQKRYLDEIMRESWREEYEEDDILASDDLCSVEQYENTKTCKLQTKKGIETENLSVENTLCPKLEITENWEKYWNEYGRDLLWQSWQEKHSGQTLCSEPWNIPDTKEEWEQHYSQLYWYYLEQFQYWEAQGWTCEASQTCDTESDGPKIEVDNKKDENCIKADLASFPSSSIIIDGESSSSSDKEHNEILDGISNISLNSEEVEQSPFESSVGCDGCQLPSEVGSSRECPASGQSEPCRGGTEDNSGSGNRGTNRPAQDAQDSSEASTIKERPRPSSVDGDESEEEPPEQKPSKLKRSHELDIDENPDSDCDDSGSLLGFKHGSGQKYGGISNFSRRRVRYLQKNVKYKSKFLDMRRQINMKNKHIFFTEESEKPVFKKSKALTKVEKFLRWVSDPVEEAVSPDNLQDSCTSSDSEEQDTSVRTGDDPLEASQRGPGPCRAVSAAGELEAGDSEGDGPGTARADKGDCAAQVAPDSPQADAAAESKKKKKKKKKSRNRRVTGLPPEIAAVPELAKYWAQRYRLFSRFDDGIKLDREGWFSVTPEKIAEHIAGRVSQSFTRGVVVDAFCGVGGNTIQFALTGKRVIAIDIDPVKIDLARNNAEVYGIADKIEFICGDFLLLASHLKADVVFLSPPWGGPDYATAETFDIRTMMSPDGFEIFKLSQKITNNIVYFLPRNADVDQVASLAGPGGQVEIEQNFLNNKLKTITAYFGDLIRRSASES
SIO_010081: TGS1
subclass of: SO_0000673
so part of: TGS1
location: join(7418324..7418427,7425357..7425421,7427627..7427787,7428393..7429218,7431434..7431551,7432982..7433068,7435158..7435332,7437356..7437647,7438966..7439124,7441695..7441838,7445364..7445580,7446446..7446524,7458662..7458784)
location: region:7418324-7458784:1
so has part: feature:7418324-7418427:1:exon
so has part: feature:7425357-7425421:1:exon
so has part: feature:7427627-7427787:1:exon
so has part: feature:7428393-7429218:1:exon
so has part: feature:7431434-7431551:1:exon
so has part: feature:7432982-7433068:1:exon
so has part: feature:7435158-7435332:1:exon
so has part: feature:7437356-7437647:1:exon
so has part: feature:7438966-7439124:1:exon
so has part: feature:7441695-7441838:1:exon
so has part: feature:7445364-7445580:1:exon
so has part: feature:7446446-7446524:1:exon
so has part: feature:7458662-7458784:1:exon

XP_029779459.1
type: Protein
SIO_000068: ncbiprotein

position:7418324:1
position: 7418324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7458784:1
position: 7458784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7418324-7418427:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7425357-7425421:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7427627-7427787:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7428393-7429218:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7431434-7431551:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7432982-7433068:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7435158-7435332:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7437356-7437647:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7438966-7439124:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7441695-7441838:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7445364-7445580:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7446446-7446524:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7458662-7458784:1:exon

TGS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: TGS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trimethylguanosine synthase isoform X2
translation: MCCEKWSRVAEMFLFIEDLEEDSKILCLCSRAFVEDRKLCNLGLKGYYIKGNGDNAGDQATEEEEGGTAESHDSKGVGLDEGELDSEAELMRSMGLPLQFGGMSAHKNFEVSMNTRNKVKIKKKKKKHQKRYLDEIMRESWREEYEEDDILASDDLCSVEQYENTKTCKLQTKKGIETENLSVENTLCPKLEITENWEKYWNEYGRDLLWQSWQEKHSGQTLCSEPWNIPDTKEEWEQHYSQLYWYYLEQFQYWEAQGWTCEASQTCDTESDGPKIEVDNKKDENCIKADLASFPSSSIIIDGESSSSSDKEHNEILDGISNISLNSEEVEQSPFESSVGCDGCQLPSEVGSSRECPASGQSEPCRGGTEDNSGSGNRGTNRPAQDAQDSSEASTIKERPRPSSVDGDESEEEPPEQKPSKLKRSHELDIDENPDSDCDDSGSLLGFKHGSGQKYGGISNFSRRRVRYLQKNVKYKSKFLDMRRQINMKNKHIFFTEESEKPVFKKSKALTKVEKFLRWVSDPVEEAVSPDNLQDSCTSSDSEEQDTSVRTGDDPLEASQRGPGPCRAVSAAGELEAGDSEGDGPGTARADKGDCAAQVAPDSPQADAAAESKKKKKKKKKSRNRRVTGLPPEIAAVPELAKYWAQRYRLFSRFDDGIKLDRGGLLSRAWRASGNRTKLS
SIO_010081: TGS1
subclass of: SO_0000673
so part of: TGS1
location: join(7418324..7418427,7425357..7425421,7427627..7427787,7428393..7429218,7431434..7431551,7432982..7433068,7435158..7435332,7437356..7437647,7438966..7439124,7458662..7458717)
location: region:7418324-7458717:1
so has part: feature:7418324-7418427:1:exon
so has part: feature:7425357-7425421:1:exon
so has part: feature:7427627-7427787:1:exon
so has part: feature:7428393-7429218:1:exon
so has part: feature:7431434-7431551:1:exon
so has part: feature:7432982-7433068:1:exon
so has part: feature:7435158-7435332:1:exon
so has part: feature:7437356-7437647:1:exon
so has part: feature:7438966-7439124:1:exon
so has part: feature:7458662-7458717:1:exon

XP_029779460.1
type: Protein
SIO_000068: ncbiprotein

position:7458717:1
position: 7458717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7418324-7418427:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7425357-7425421:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7427627-7427787:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7428393-7429218:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7431434-7431551:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7432982-7433068:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7435158-7435332:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7437356-7437647:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7438966-7439124:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7458662-7458717:1:exon

LYN
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LYN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7545644..7631432
location: region:7545644-7631432:1
so has part: feature:7545644-7631432:1:exon
subclass of: SO_0000010

115279512
type: Gene
SIO_000068: ncbigene

position:7545644:1
position: 7545644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7631432:1
position: 7631432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7545644-7631432:1:exon

LYN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: LYN
product: LYN proto-oncogene, Src family tyrosine kinase, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_029924057.1
SIO_010081: LYN
subclass of: SO_0000673
so part of: LYN
location: join(7545644..7545769,7569741..7569877,7572807..7572852,7573845..7573950,7575728..7575826,7576208..7576311,7576845..7576994,7577825..7577977,7590660..7590842,7593165..7593241,7618460..7618613,7620874..7621005,7629960..7631432)
location: region:7545644-7631432:1
so has part: feature:7545644-7545769:1:exon
so has part: feature:7569741-7569877:1:exon
so has part: feature:7572807-7572852:1:exon
so has part: feature:7573845-7573950:1:exon
so has part: feature:7575728-7575826:1:exon
so has part: feature:7576208-7576311:1:exon
so has part: feature:7576845-7576994:1:exon
so has part: feature:7577825-7577977:1:exon
so has part: feature:7590660-7590842:1:exon
so has part: feature:7593165-7593241:1:exon
so has part: feature:7618460-7618613:1:exon
so has part: feature:7620874-7621005:1:exon
so has part: feature:7629960-7631432:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7545644-7545769:1:exon

position:7545769:1
position: 7545769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7569741-7569877:1:exon

position:7569741:1
position: 7569741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7569877:1
position: 7569877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7572807-7572852:1:exon

position:7572807:1
position: 7572807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7572852:1
position: 7572852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7573845-7573950:1:exon

position:7573845:1
position: 7573845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7573950:1
position: 7573950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7575728-7575826:1:exon

position:7575728:1
position: 7575728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7575826:1
position: 7575826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7576208-7576311:1:exon

position:7576208:1
position: 7576208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7576311:1
position: 7576311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7576845-7576994:1:exon

position:7576845:1
position: 7576845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7576994:1
position: 7576994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7577825-7577977:1:exon

position:7577825:1
position: 7577825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7577977:1
position: 7577977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7590660-7590842:1:exon

position:7590660:1
position: 7590660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7590842:1
position: 7590842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7593165-7593241:1:exon

position:7593165:1
position: 7593165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7593241:1
position: 7593241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7618460-7618613:1:exon

position:7618460:1
position: 7618460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7618613:1
position: 7618613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7620874-7621005:1:exon

position:7620874:1
position: 7620874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7621005:1
position: 7621005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7629960-7631432:1:exon

position:7629960:1
position: 7629960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LYN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: LYN
product: LYN proto-oncogene, Src family tyrosine kinase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_029924056.1
SIO_010081: LYN
subclass of: SO_0000673
so part of: LYN
location: join(7545645..7545746,7569741..7569877,7572807..7572852,7573845..7573950,7575728..7575826,7576208..7576311,7576845..7576994,7577825..7577977,7590660..7590842,7593165..7593241,7618460..7618613,7620874..7621005,7629960..7631432)
location: region:7545645-7631432:1
so has part: feature:7545645-7545746:1:exon
so has part: feature:7569741-7569877:1:exon
so has part: feature:7572807-7572852:1:exon
so has part: feature:7573845-7573950:1:exon
so has part: feature:7575728-7575826:1:exon
so has part: feature:7576208-7576311:1:exon
so has part: feature:7576845-7576994:1:exon
so has part: feature:7577825-7577977:1:exon
so has part: feature:7590660-7590842:1:exon
so has part: feature:7593165-7593241:1:exon
so has part: feature:7618460-7618613:1:exon
so has part: feature:7620874-7621005:1:exon
so has part: feature:7629960-7631432:1:exon

position:7545645:1
position: 7545645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7545645-7545746:1:exon

position:7545746:1
position: 7545746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7569741-7569877:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7572807-7572852:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7573845-7573950:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7575728-7575826:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7576208-7576311:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7576845-7576994:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7577825-7577977:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7590660-7590842:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7593165-7593241:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7618460-7618613:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7620874-7621005:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7629960-7631432:1:exon

LYN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: LYN
product: LYN proto-oncogene, Src family tyrosine kinase, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_029924059.1
SIO_010081: LYN
subclass of: SO_0000673
so part of: LYN
location: join(7545646..7545769,7569741..7569814,7572807..7572852,7573845..7573950,7575728..7575826,7576208..7576311,7576845..7576994,7577825..7577977,7590660..7590842,7593165..7593241,7618460..7618613,7620874..7621005,7629960..7631432)
location: region:7545646-7631432:1
so has part: feature:7545646-7545769:1:exon
so has part: feature:7569741-7569814:1:exon
so has part: feature:7572807-7572852:1:exon
so has part: feature:7573845-7573950:1:exon
so has part: feature:7575728-7575826:1:exon
so has part: feature:7576208-7576311:1:exon
so has part: feature:7576845-7576994:1:exon
so has part: feature:7577825-7577977:1:exon
so has part: feature:7590660-7590842:1:exon
so has part: feature:7593165-7593241:1:exon
so has part: feature:7618460-7618613:1:exon
so has part: feature:7620874-7621005:1:exon
so has part: feature:7629960-7631432:1:exon

position:7545646:1
position: 7545646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7545646-7545769:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7569741-7569814:1:exon

position:7569814:1
position: 7569814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7572807-7572852:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7573845-7573950:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7575728-7575826:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7576208-7576311:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7576845-7576994:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7577825-7577977:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7590660-7590842:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7593165-7593241:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7618460-7618613:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7620874-7621005:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7629960-7631432:1:exon

LYN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: LYN
product: LYN proto-oncogene, Src family tyrosine kinase, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_029924058.1
SIO_010081: LYN
subclass of: SO_0000673
so part of: LYN
location: join(7545646..7545746,7569741..7569814,7572807..7572852,7573845..7573950,7575728..7575826,7576208..7576311,7576845..7576994,7577825..7577977,7590660..7590842,7593165..7593241,7618460..7618613,7620874..7621005,7629960..7631432)
location: region:7545646-7631432:1
so has part: feature:7545646-7545746:1:exon
so has part: feature:7569741-7569814:1:exon
so has part: feature:7572807-7572852:1:exon
so has part: feature:7573845-7573950:1:exon
so has part: feature:7575728-7575826:1:exon
so has part: feature:7576208-7576311:1:exon
so has part: feature:7576845-7576994:1:exon
so has part: feature:7577825-7577977:1:exon
so has part: feature:7590660-7590842:1:exon
so has part: feature:7593165-7593241:1:exon
so has part: feature:7618460-7618613:1:exon
so has part: feature:7620874-7621005:1:exon
so has part: feature:7629960-7631432:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7545646-7545746:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7569741-7569814:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7572807-7572852:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7573845-7573950:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7575728-7575826:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7576208-7576311:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7576845-7576994:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7577825-7577977:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7590660-7590842:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7593165-7593241:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7618460-7618613:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7620874-7621005:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7629960-7631432:1:exon

LYN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: LYN
product: LYN proto-oncogene, Src family tyrosine kinase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_029924054.1
SIO_010081: LYN
subclass of: SO_0000673
so part of: LYN
location: join(7562797..7562931,7569741..7569877,7572807..7572852,7573845..7573950,7575728..7575826,7576208..7576311,7576845..7576994,7577825..7577977,7590660..7590842,7593165..7593241,7618460..7618613,7620874..7621005,7629960..7631432)
location: region:7562797-7631432:1
so has part: feature:7562797-7562931:1:exon
so has part: feature:7569741-7569877:1:exon
so has part: feature:7572807-7572852:1:exon
so has part: feature:7573845-7573950:1:exon
so has part: feature:7575728-7575826:1:exon
so has part: feature:7576208-7576311:1:exon
so has part: feature:7576845-7576994:1:exon
so has part: feature:7577825-7577977:1:exon
so has part: feature:7590660-7590842:1:exon
so has part: feature:7593165-7593241:1:exon
so has part: feature:7618460-7618613:1:exon
so has part: feature:7620874-7621005:1:exon
so has part: feature:7629960-7631432:1:exon

position:7562797:1
position: 7562797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7562797-7562931:1:exon

position:7562931:1
position: 7562931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7569741-7569877:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7572807-7572852:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7573845-7573950:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7575728-7575826:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7576208-7576311:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7576845-7576994:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7577825-7577977:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7590660-7590842:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7593165-7593241:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7618460-7618613:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7620874-7621005:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7629960-7631432:1:exon

LYN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: LYN
product: LYN proto-oncogene, Src family tyrosine kinase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_029924055.1
SIO_010081: LYN
subclass of: SO_0000673
so part of: LYN
location: join(7562801..7562931,7569741..7569814,7572807..7572852,7573845..7573950,7575728..7575826,7576208..7576311,7576845..7576994,7577825..7577977,7590660..7590842,7593165..7593241,7618460..7618613,7620874..7621005,7629960..7631432)
location: region:7562801-7631432:1
so has part: feature:7562801-7562931:1:exon
so has part: feature:7569741-7569814:1:exon
so has part: feature:7572807-7572852:1:exon
so has part: feature:7573845-7573950:1:exon
so has part: feature:7575728-7575826:1:exon
so has part: feature:7576208-7576311:1:exon
so has part: feature:7576845-7576994:1:exon
so has part: feature:7577825-7577977:1:exon
so has part: feature:7590660-7590842:1:exon
so has part: feature:7593165-7593241:1:exon
so has part: feature:7618460-7618613:1:exon
so has part: feature:7620874-7621005:1:exon
so has part: feature:7629960-7631432:1:exon

position:7562801:1
position: 7562801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7562801-7562931:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7569741-7569814:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7572807-7572852:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7573845-7573950:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7575728-7575826:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7576208-7576311:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7576845-7576994:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7577825-7577977:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7590660-7590842:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7593165-7593241:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7618460-7618613:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7620874-7621005:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7629960-7631432:1:exon

LYN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: LYN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein kinase Lyn isoform X1
translation: MEQGRKWPFRWSRWPGCHPEGNMGCIKSKRKDNLNGDGIDLKPQPVRNTDRTIYVRDPTSNKHQRPVPESQLLPGQRFQTKDPEEQGDIVVALYPYDGIHPDDLSFKKGEKMKVLEEHGEWWKAKSLTTKREGFIPSNYVAKVNTLETEEWFFKDITRKDAERQLLAPGNSAGAFLIRESETLKGSFSLSVRDYDPVHGDVIKHYKIRSLDNGGYYISPRITFPCISDMIKHYQKQSDGLCRRLEKACISPKPQKPWDKDAWEIPRESIKLLKRLGAGQFGEVWMGSYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGRVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRVENCPDELYDIMKMCWKEKAEERPTFDYLQSVLDDFYTATEGQYQQQP
SIO_010081: LYN
subclass of: SO_0000673
so part of: LYN
location: join(7562871..7562931,7569741..7569877,7572807..7572852,7573845..7573950,7575728..7575826,7576208..7576311,7576845..7576994,7577825..7577977,7590660..7590842,7593165..7593241,7618460..7618613,7620874..7621005,7629960..7630162)
location: region:7562871-7630162:1
so has part: feature:7562871-7562931:1:exon
so has part: feature:7569741-7569877:1:exon
so has part: feature:7572807-7572852:1:exon
so has part: feature:7573845-7573950:1:exon
so has part: feature:7575728-7575826:1:exon
so has part: feature:7576208-7576311:1:exon
so has part: feature:7576845-7576994:1:exon
so has part: feature:7577825-7577977:1:exon
so has part: feature:7590660-7590842:1:exon
so has part: feature:7593165-7593241:1:exon
so has part: feature:7618460-7618613:1:exon
so has part: feature:7620874-7621005:1:exon
so has part: feature:7629960-7630162:1:exon

XP_029779914.1
type: Protein
SIO_000068: ncbiprotein

position:7562871:1
position: 7562871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7630162:1
position: 7630162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7562871-7562931:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7569741-7569877:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7572807-7572852:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7573845-7573950:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7575728-7575826:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7576208-7576311:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7576845-7576994:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7577825-7577977:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7590660-7590842:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7593165-7593241:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7618460-7618613:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7620874-7621005:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7629960-7630162:1:exon

LYN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: LYN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein kinase Lyn isoform X2
translation: MEQGRKWPFRWSRWPGCHPEGNMGCIKSKRKDNLNGDGIDLKPQPVPESQLLPGQRFQTKDPEEQGDIVVALYPYDGIHPDDLSFKKGEKMKVLEEHGEWWKAKSLTTKREGFIPSNYVAKVNTLETEEWFFKDITRKDAERQLLAPGNSAGAFLIRESETLKGSFSLSVRDYDPVHGDVIKHYKIRSLDNGGYYISPRITFPCISDMIKHYQKQSDGLCRRLEKACISPKPQKPWDKDAWEIPRESIKLLKRLGAGQFGEVWMGSYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGRVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRVENCPDELYDIMKMCWKEKAEERPTFDYLQSVLDDFYTATEGQYQQQP
SIO_010081: LYN
subclass of: SO_0000673
so part of: LYN
location: join(7562871..7562931,7569741..7569814,7572807..7572852,7573845..7573950,7575728..7575826,7576208..7576311,7576845..7576994,7577825..7577977,7590660..7590842,7593165..7593241,7618460..7618613,7620874..7621005,7629960..7630162)
location: region:7562871-7630162:1
so has part: feature:7562871-7562931:1:exon
so has part: feature:7569741-7569814:1:exon
so has part: feature:7572807-7572852:1:exon
so has part: feature:7573845-7573950:1:exon
so has part: feature:7575728-7575826:1:exon
so has part: feature:7576208-7576311:1:exon
so has part: feature:7576845-7576994:1:exon
so has part: feature:7577825-7577977:1:exon
so has part: feature:7590660-7590842:1:exon
so has part: feature:7593165-7593241:1:exon
so has part: feature:7618460-7618613:1:exon
so has part: feature:7620874-7621005:1:exon
so has part: feature:7629960-7630162:1:exon

XP_029779915.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7562871-7562931:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7569741-7569814:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7572807-7572852:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7573845-7573950:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7575728-7575826:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7576208-7576311:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7576845-7576994:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7577825-7577977:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7590660-7590842:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7593165-7593241:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7618460-7618613:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7620874-7621005:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7629960-7630162:1:exon

LYN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: LYN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein kinase Lyn isoform X3
translation: MGCIKSKRKDNLNGDGIDLKPQPVRNTDRTIYVRDPTSNKHQRPVPESQLLPGQRFQTKDPEEQGDIVVALYPYDGIHPDDLSFKKGEKMKVLEEHGEWWKAKSLTTKREGFIPSNYVAKVNTLETEEWFFKDITRKDAERQLLAPGNSAGAFLIRESETLKGSFSLSVRDYDPVHGDVIKHYKIRSLDNGGYYISPRITFPCISDMIKHYQKQSDGLCRRLEKACISPKPQKPWDKDAWEIPRESIKLLKRLGAGQFGEVWMGSYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGRVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRVENCPDELYDIMKMCWKEKAEERPTFDYLQSVLDDFYTATEGQYQQQP
SIO_010081: LYN
subclass of: SO_0000673
so part of: LYN
location: join(7569746..7569877,7572807..7572852,7573845..7573950,7575728..7575826,7576208..7576311,7576845..7576994,7577825..7577977,7590660..7590842,7593165..7593241,7618460..7618613,7620874..7621005,7629960..7630162)
location: region:7569746-7630162:1
so has part: feature:7569746-7569877:1:exon
so has part: feature:7572807-7572852:1:exon
so has part: feature:7573845-7573950:1:exon
so has part: feature:7575728-7575826:1:exon
so has part: feature:7576208-7576311:1:exon
so has part: feature:7576845-7576994:1:exon
so has part: feature:7577825-7577977:1:exon
so has part: feature:7590660-7590842:1:exon
so has part: feature:7593165-7593241:1:exon
so has part: feature:7618460-7618613:1:exon
so has part: feature:7620874-7621005:1:exon
so has part: feature:7629960-7630162:1:exon

XP_029779916.1
type: Protein
SIO_000068: ncbiprotein

position:7569746:1
position: 7569746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7569746-7569877:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7572807-7572852:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7573845-7573950:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7575728-7575826:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7576208-7576311:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7576845-7576994:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7577825-7577977:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7590660-7590842:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7593165-7593241:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7618460-7618613:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7620874-7621005:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7629960-7630162:1:exon

LYN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: LYN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein kinase Lyn isoform X3
translation: MGCIKSKRKDNLNGDGIDLKPQPVRNTDRTIYVRDPTSNKHQRPVPESQLLPGQRFQTKDPEEQGDIVVALYPYDGIHPDDLSFKKGEKMKVLEEHGEWWKAKSLTTKREGFIPSNYVAKVNTLETEEWFFKDITRKDAERQLLAPGNSAGAFLIRESETLKGSFSLSVRDYDPVHGDVIKHYKIRSLDNGGYYISPRITFPCISDMIKHYQKQSDGLCRRLEKACISPKPQKPWDKDAWEIPRESIKLLKRLGAGQFGEVWMGSYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGRVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRVENCPDELYDIMKMCWKEKAEERPTFDYLQSVLDDFYTATEGQYQQQP
SIO_010081: LYN
subclass of: SO_0000673
so part of: LYN
location: join(7569746..7569877,7572807..7572852,7573845..7573950,7575728..7575826,7576208..7576311,7576845..7576994,7577825..7577977,7590660..7590842,7593165..7593241,7618460..7618613,7620874..7621005,7629960..7630162)
location: region:7569746-7630162:1
so has part: feature:7569746-7569877:1:exon
so has part: feature:7572807-7572852:1:exon
so has part: feature:7573845-7573950:1:exon
so has part: feature:7575728-7575826:1:exon
so has part: feature:7576208-7576311:1:exon
so has part: feature:7576845-7576994:1:exon
so has part: feature:7577825-7577977:1:exon
so has part: feature:7590660-7590842:1:exon
so has part: feature:7593165-7593241:1:exon
so has part: feature:7618460-7618613:1:exon
so has part: feature:7620874-7621005:1:exon
so has part: feature:7629960-7630162:1:exon

XP_029779917.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7569746-7569877:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7572807-7572852:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7573845-7573950:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7575728-7575826:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7576208-7576311:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7576845-7576994:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7577825-7577977:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7590660-7590842:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7593165-7593241:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7618460-7618613:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7620874-7621005:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7629960-7630162:1:exon

LYN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: LYN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein kinase Lyn isoform X4
translation: MGCIKSKRKDNLNGDGIDLKPQPVPESQLLPGQRFQTKDPEEQGDIVVALYPYDGIHPDDLSFKKGEKMKVLEEHGEWWKAKSLTTKREGFIPSNYVAKVNTLETEEWFFKDITRKDAERQLLAPGNSAGAFLIRESETLKGSFSLSVRDYDPVHGDVIKHYKIRSLDNGGYYISPRITFPCISDMIKHYQKQSDGLCRRLEKACISPKPQKPWDKDAWEIPRESIKLLKRLGAGQFGEVWMGSYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGRVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRVENCPDELYDIMKMCWKEKAEERPTFDYLQSVLDDFYTATEGQYQQQP
SIO_010081: LYN
subclass of: SO_0000673
so part of: LYN
location: join(7569746..7569814,7572807..7572852,7573845..7573950,7575728..7575826,7576208..7576311,7576845..7576994,7577825..7577977,7590660..7590842,7593165..7593241,7618460..7618613,7620874..7621005,7629960..7630162)
location: region:7569746-7630162:1
so has part: feature:7569746-7569814:1:exon
so has part: feature:7572807-7572852:1:exon
so has part: feature:7573845-7573950:1:exon
so has part: feature:7575728-7575826:1:exon
so has part: feature:7576208-7576311:1:exon
so has part: feature:7576845-7576994:1:exon
so has part: feature:7577825-7577977:1:exon
so has part: feature:7590660-7590842:1:exon
so has part: feature:7593165-7593241:1:exon
so has part: feature:7618460-7618613:1:exon
so has part: feature:7620874-7621005:1:exon
so has part: feature:7629960-7630162:1:exon

XP_029779918.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7569746-7569814:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7572807-7572852:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7573845-7573950:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7575728-7575826:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7576208-7576311:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7576845-7576994:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7577825-7577977:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7590660-7590842:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7593165-7593241:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7618460-7618613:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7620874-7621005:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7629960-7630162:1:exon

LYN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: LYN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein kinase Lyn isoform X4
translation: MGCIKSKRKDNLNGDGIDLKPQPVPESQLLPGQRFQTKDPEEQGDIVVALYPYDGIHPDDLSFKKGEKMKVLEEHGEWWKAKSLTTKREGFIPSNYVAKVNTLETEEWFFKDITRKDAERQLLAPGNSAGAFLIRESETLKGSFSLSVRDYDPVHGDVIKHYKIRSLDNGGYYISPRITFPCISDMIKHYQKQSDGLCRRLEKACISPKPQKPWDKDAWEIPRESIKLLKRLGAGQFGEVWMGSYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGRVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRVENCPDELYDIMKMCWKEKAEERPTFDYLQSVLDDFYTATEGQYQQQP
SIO_010081: LYN
subclass of: SO_0000673
so part of: LYN
location: join(7569746..7569814,7572807..7572852,7573845..7573950,7575728..7575826,7576208..7576311,7576845..7576994,7577825..7577977,7590660..7590842,7593165..7593241,7618460..7618613,7620874..7621005,7629960..7630162)
location: region:7569746-7630162:1
so has part: feature:7569746-7569814:1:exon
so has part: feature:7572807-7572852:1:exon
so has part: feature:7573845-7573950:1:exon
so has part: feature:7575728-7575826:1:exon
so has part: feature:7576208-7576311:1:exon
so has part: feature:7576845-7576994:1:exon
so has part: feature:7577825-7577977:1:exon
so has part: feature:7590660-7590842:1:exon
so has part: feature:7593165-7593241:1:exon
so has part: feature:7618460-7618613:1:exon
so has part: feature:7620874-7621005:1:exon
so has part: feature:7629960-7630162:1:exon

XP_029779919.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7569746-7569814:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7572807-7572852:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7573845-7573950:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7575728-7575826:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7576208-7576311:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7576845-7576994:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7577825-7577977:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7590660-7590842:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7593165-7593241:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7618460-7618613:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7620874-7621005:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7629960-7630162:1:exon

LOC115279052
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115279052
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7646959..7649414
location: region:7646959-7649414:1
so has part: feature:7646959-7649414:1:exon
subclass of: SO_0000011

115279052
type: Gene
SIO_000068: ncbigene

position:7646959:1
position: 7646959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7649414:1
position: 7649414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7646959-7649414:1:exon

LOC115279052
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115279052
product: uncharacterized LOC115279052
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003903173.1
SIO_010081: LOC115279052
subclass of: SO_0000673
so part of: LOC115279052
location: join(7646959..7647181,7648100..7648267,7648734..7649414)
location: region:7646959-7649414:1
so has part: feature:7646959-7647181:1:exon
so has part: feature:7648100-7648267:1:exon
so has part: feature:7648734-7649414:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7646959-7647181:1:exon

position:7647181:1
position: 7647181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7648100-7648267:1:exon

position:7648100:1
position: 7648100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7648267:1
position: 7648267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7648734-7649414:1:exon

position:7648734:1
position: 7648734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RPS20
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: RPS20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7676143..7677359)
location: region:7676143-7677359:-1
so has part: feature:7676143-7677359:-1:exon
subclass of: SO_0000010

115278957
type: Gene
SIO_000068: ncbigene

position:7676143:-1
position: 7676143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7677359:-1
position: 7677359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7676143-7677359:-1:exon

RPS20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: RPS20
product: ribosomal protein S20
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_029923446.1
SIO_010081: RPS20
subclass of: SO_0000673
so part of: RPS20
location: complement(join(7676143..7676358,7676533..7676606,7676912..7677011,7677213..7677359))
location: region:7676143-7677359:-1
so has part: feature:7677213-7677359:-1:exon
so has part: feature:7676912-7677011:-1:exon
so has part: feature:7676533-7676606:-1:exon
so has part: feature:7676143-7676358:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7677213-7677359:-1:exon

position:7677213:-1
position: 7677213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7676912-7677011:-1:exon

position:7676912:-1
position: 7676912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7677011:-1
position: 7677011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7676533-7676606:-1:exon

position:7676533:-1
position: 7676533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7676606:-1
position: 7676606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7676143-7676358:-1:exon

position:7676358:-1
position: 7676358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RPS20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: RPS20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S20
translation: MAFKDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA
SIO_010081: RPS20
subclass of: SO_0000673
so part of: RPS20
location: complement(join(7676176..7676358,7676533..7676606,7676912..7677011,7677213..7677215))
location: region:7676176-7677215:-1
so has part: feature:7677213-7677215:-1:exon
so has part: feature:7676912-7677011:-1:exon
so has part: feature:7676533-7676606:-1:exon
so has part: feature:7676176-7676358:-1:exon

XP_029779306.1
type: Protein
SIO_000068: ncbiprotein

position:7676176:-1
position: 7676176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7677215:-1
position: 7677215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7677213-7677215:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7676912-7677011:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7676533-7676606:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7676176-7676358:-1:exon

LOC115279571
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115279571
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(7676679..7676745)
location: region:7676679-7676745:-1
so has part: feature:7676679-7676745:-1:exon
subclass of: SO_0000578

115279571
type: Gene
SIO_000068: ncbigene

position:7676679:-1
position: 7676679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7676745:-1
position: 7676745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7676679-7676745:-1:exon

LOC115279571
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: snoRNA
gene: LOC115279571
product: small nucleolar RNA U54
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01277
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003903521.1
SIO_010081: LOC115279571
subclass of: SO_0000673
so part of: LOC115279571
location: complement(7676679..7676745)
location: region:7676679-7676745:-1
so has part: feature:7676679-7676745:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7676679-7676745:-1:exon

MOS
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: MOS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7702098..7703215)
location: region:7702098-7703215:-1
so has part: feature:7702098-7703215:-1:exon
subclass of: SO_0000010

115279531
type: Gene
SIO_000068: ncbigene

position:7702098:-1
position: 7702098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7703215:-1
position: 7703215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7702098-7703215:-1:exon

MOS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: MOS
product: MOS proto-oncogene, serine/threonine kinase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 26% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_029924072.1
SIO_010081: MOS
subclass of: SO_0000673
so part of: MOS
location: complement(7702098..7703215)
location: region:7702098-7703215:-1
so has part: feature:7702098-7703215:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7702098-7703215:-1:exon

MOS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: MOS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proto-oncogene serine/threonine-protein kinase mos
translation: MPSPLPRRRYLPSELSPSVDARPCSSPSELPGRAGRPLLGGSPPRAPRLPRRLAWCSIDWEQVRFLRRLGAGGFGSVYKATYHGVLVAVKQVNRCTKNRAASQRSFWAELNIARLRHDNIVQVVAASTCTPAGSNSLGTIIMEFGGNVTLHQVIYGATGCPEEDAEPHCRAGDQLNVGKCLKYSLDIVNGLLFLHSQSIVHLDLKPANILISEQDVCKIGDFGCSEKLEDRLCLQARPYPLGGTYTHRAPELLKGEPVTPKADIYSFAITLWQMTTKAAPYAGERQYVLYAVVAHELRPSLSAAVFTDSVAGERLAKVIQCCWRASASQRPSAVLLLVDLNSLRAEFG
SIO_010081: MOS
subclass of: SO_0000673
so part of: MOS
location: complement(7702109..7703155)
location: region:7702109-7703155:-1
so has part: feature:7702109-7703155:-1:exon

XP_029779932.1
type: Protein
SIO_000068: ncbiprotein

position:7702109:-1
position: 7702109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7703155:-1
position: 7703155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7702109-7703155:-1:exon

LOC115279038
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115279038
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7708806..7720800
location: region:7708806-7720800:1
so has part: feature:7708806-7720800:1:exon
subclass of: SO_0000011

115279038
type: Gene
SIO_000068: ncbigene

position:7708806:1
position: 7708806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7720800:1
position: 7720800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7708806-7720800:1:exon

LOC115279038
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115279038
product: uncharacterized LOC115279038
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003903168.1
SIO_010081: LOC115279038
subclass of: SO_0000673
so part of: LOC115279038
location: join(7708806..7708888,7710842..7710948,7720379..7720800)
location: region:7708806-7720800:1
so has part: feature:7708806-7708888:1:exon
so has part: feature:7710842-7710948:1:exon
so has part: feature:7720379-7720800:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7708806-7708888:1:exon

position:7708888:1
position: 7708888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7710842-7710948:1:exon

position:7710842:1
position: 7710842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7710948:1
position: 7710948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7720379-7720800:1:exon

position:7720379:1
position: 7720379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PLAG1
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: PLAG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7749551..7770369)
location: region:7749551-7770369:-1
so has part: feature:7749551-7770369:-1:exon
subclass of: SO_0000010

115279039
type: Gene
SIO_000068: ncbigene

position:7749551:-1
position: 7749551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7770369:-1
position: 7770369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7749551-7770369:-1:exon

PLAG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: PLAG1
product: PLAG1 zinc finger, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029923550.1
SIO_010081: PLAG1
subclass of: SO_0000673
so part of: PLAG1
location: complement(join(7749551..7752454,7752985..7753343,7755927..7756025,7770287..7770369))
location: region:7749551-7770369:-1
so has part: feature:7770287-7770369:-1:exon
so has part: feature:7755927-7756025:-1:exon
so has part: feature:7752985-7753343:-1:exon
so has part: feature:7749551-7752454:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7770287-7770369:-1:exon

position:7770287:-1
position: 7770287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7755927-7756025:-1:exon

position:7755927:-1
position: 7755927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7756025:-1
position: 7756025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7752985-7753343:-1:exon

position:7752985:-1
position: 7752985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7753343:-1
position: 7753343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7749551-7752454:-1:exon

position:7752454:-1
position: 7752454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PLAG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: PLAG1
product: PLAG1 zinc finger, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029923551.1
SIO_010081: PLAG1
subclass of: SO_0000673
so part of: PLAG1
location: complement(join(7749551..7752454,7755927..7756025,7769611..7770125))
location: region:7749551-7770125:-1
so has part: feature:7769611-7770125:-1:exon
so has part: feature:7755927-7756025:-1:exon
so has part: feature:7749551-7752454:-1:exon

position:7770125:-1
position: 7770125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7769611-7770125:-1:exon

position:7769611:-1
position: 7769611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7755927-7756025:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7749551-7752454:-1:exon

PLAG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: PLAG1
product: PLAG1 zinc finger, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029923548.1
SIO_010081: PLAG1
subclass of: SO_0000673
so part of: PLAG1
location: complement(join(7749551..7752454,7752985..7753343,7755927..7756025,7769611..7770125))
location: region:7749551-7770125:-1
so has part: feature:7769611-7770125:-1:exon
so has part: feature:7755927-7756025:-1:exon
so has part: feature:7752985-7753343:-1:exon
so has part: feature:7749551-7752454:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7769611-7770125:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7755927-7756025:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7752985-7753343:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7749551-7752454:-1:exon

PLAG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: PLAG1
product: PLAG1 zinc finger, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029923549.1
SIO_010081: PLAG1
subclass of: SO_0000673
so part of: PLAG1
location: complement(join(7749551..7752454,7752985..7753343,7755927..7756025,7758523..7758579))
location: region:7749551-7758579:-1
so has part: feature:7758523-7758579:-1:exon
so has part: feature:7755927-7756025:-1:exon
so has part: feature:7752985-7753343:-1:exon
so has part: feature:7749551-7752454:-1:exon

position:7758579:-1
position: 7758579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7758523-7758579:-1:exon

position:7758523:-1
position: 7758523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7755927-7756025:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7752985-7753343:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7749551-7752454:-1:exon

PLAG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: PLAG1
product: PLAG1 zinc finger, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029923552.1
SIO_010081: PLAG1
subclass of: SO_0000673
so part of: PLAG1
location: complement(join(7749551..7752454,7754877..7754903))
location: region:7749551-7754903:-1
so has part: feature:7754877-7754903:-1:exon
so has part: feature:7749551-7752454:-1:exon

position:7754903:-1
position: 7754903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7754877-7754903:-1:exon

position:7754877:-1
position: 7754877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7749551-7752454:-1:exon

PLAG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: PLAG1
product: PLAG1 zinc finger, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029923553.1
SIO_010081: PLAG1
subclass of: SO_0000673
so part of: PLAG1
location: complement(join(7749551..7752454,7753194..7753242))
location: region:7749551-7753242:-1
so has part: feature:7753194-7753242:-1:exon
so has part: feature:7749551-7752454:-1:exon

position:7753242:-1
position: 7753242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7753194-7753242:-1:exon

position:7753194:-1
position: 7753194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7749551-7752454:-1:exon

PLAG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: PLAG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein PLAG1 isoform X1
translation: MATVIPGDLSEVRDTQKVPSGKRKRGETKPRKNFPCQLCDKAFNSVEKLKVHSYSHTGERPYKCTQQDCTKAFVSKYKLQRHMATHSPEKTHKCNYCEKMFHRKDHLKNHLHTHDPNKETFKCEECGKNYNTKLGFKRHLALHAATSGDLTCKVCLQTFESTGVLLEHLKSHAGKSSSGVKEKKHQCEHCDRRFYTRKDVRRHMVVHTGRKDFLCQYCAQRFGRKDHLTRHMKKSHNQELLKVKTEPVDFLDPFTCNVSVPIKDELLPVMSLPSSELLSKPFTNTLQLNLYNTPFQSMPSSGPAHQMITTLPLGMTCPIDMDAVHPSHHLSFKYPFSSTSYAISIPEKEQPLKGEIESYLMELQGGVPSSSQECQASSSKLGLDPPIGSLDDGAGDLSLSKSSISISDPLNTPALDFSQLFNFIPLNGPPYNPLSVGSLGMSYSQEEAHSSVSQLPPQTQDLQDPANTIGLGSLHSLSAAFTSSFSTSTTLPRFHQAFQ
SIO_010081: PLAG1
subclass of: SO_0000673
so part of: PLAG1
location: complement(join(7751197..7752454,7752985..7753226))
location: region:7751197-7753226:-1
so has part: feature:7752985-7753226:-1:exon
so has part: feature:7751197-7752454:-1:exon

XP_029779408.1
type: Protein
SIO_000068: ncbiprotein

position:7751197:-1
position: 7751197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7753226:-1
position: 7753226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7752985-7753226:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7751197-7752454:-1:exon

PLAG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: PLAG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein PLAG1 isoform X1
translation: MATVIPGDLSEVRDTQKVPSGKRKRGETKPRKNFPCQLCDKAFNSVEKLKVHSYSHTGERPYKCTQQDCTKAFVSKYKLQRHMATHSPEKTHKCNYCEKMFHRKDHLKNHLHTHDPNKETFKCEECGKNYNTKLGFKRHLALHAATSGDLTCKVCLQTFESTGVLLEHLKSHAGKSSSGVKEKKHQCEHCDRRFYTRKDVRRHMVVHTGRKDFLCQYCAQRFGRKDHLTRHMKKSHNQELLKVKTEPVDFLDPFTCNVSVPIKDELLPVMSLPSSELLSKPFTNTLQLNLYNTPFQSMPSSGPAHQMITTLPLGMTCPIDMDAVHPSHHLSFKYPFSSTSYAISIPEKEQPLKGEIESYLMELQGGVPSSSQECQASSSKLGLDPPIGSLDDGAGDLSLSKSSISISDPLNTPALDFSQLFNFIPLNGPPYNPLSVGSLGMSYSQEEAHSSVSQLPPQTQDLQDPANTIGLGSLHSLSAAFTSSFSTSTTLPRFHQAFQ
SIO_010081: PLAG1
subclass of: SO_0000673
so part of: PLAG1
location: complement(join(7751197..7752454,7752985..7753226))
location: region:7751197-7753226:-1
so has part: feature:7752985-7753226:-1:exon
so has part: feature:7751197-7752454:-1:exon

XP_029779409.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7752985-7753226:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7751197-7752454:-1:exon

PLAG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: PLAG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein PLAG1 isoform X1
translation: MATVIPGDLSEVRDTQKVPSGKRKRGETKPRKNFPCQLCDKAFNSVEKLKVHSYSHTGERPYKCTQQDCTKAFVSKYKLQRHMATHSPEKTHKCNYCEKMFHRKDHLKNHLHTHDPNKETFKCEECGKNYNTKLGFKRHLALHAATSGDLTCKVCLQTFESTGVLLEHLKSHAGKSSSGVKEKKHQCEHCDRRFYTRKDVRRHMVVHTGRKDFLCQYCAQRFGRKDHLTRHMKKSHNQELLKVKTEPVDFLDPFTCNVSVPIKDELLPVMSLPSSELLSKPFTNTLQLNLYNTPFQSMPSSGPAHQMITTLPLGMTCPIDMDAVHPSHHLSFKYPFSSTSYAISIPEKEQPLKGEIESYLMELQGGVPSSSQECQASSSKLGLDPPIGSLDDGAGDLSLSKSSISISDPLNTPALDFSQLFNFIPLNGPPYNPLSVGSLGMSYSQEEAHSSVSQLPPQTQDLQDPANTIGLGSLHSLSAAFTSSFSTSTTLPRFHQAFQ
SIO_010081: PLAG1
subclass of: SO_0000673
so part of: PLAG1
location: complement(join(7751197..7752454,7752985..7753226))
location: region:7751197-7753226:-1
so has part: feature:7752985-7753226:-1:exon
so has part: feature:7751197-7752454:-1:exon

XP_029779410.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7752985-7753226:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7751197-7752454:-1:exon

PLAG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: PLAG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein PLAG1 isoform X2
translation: MATHSPEKTHKCNYCEKMFHRKDHLKNHLHTHDPNKETFKCEECGKNYNTKLGFKRHLALHAATSGDLTCKVCLQTFESTGVLLEHLKSHAGKSSSGVKEKKHQCEHCDRRFYTRKDVRRHMVVHTGRKDFLCQYCAQRFGRKDHLTRHMKKSHNQELLKVKTEPVDFLDPFTCNVSVPIKDELLPVMSLPSSELLSKPFTNTLQLNLYNTPFQSMPSSGPAHQMITTLPLGMTCPIDMDAVHPSHHLSFKYPFSSTSYAISIPEKEQPLKGEIESYLMELQGGVPSSSQECQASSSKLGLDPPIGSLDDGAGDLSLSKSSISISDPLNTPALDFSQLFNFIPLNGPPYNPLSVGSLGMSYSQEEAHSSVSQLPPQTQDLQDPANTIGLGSLHSLSAAFTSSFSTSTTLPRFHQAFQ
SIO_010081: PLAG1
subclass of: SO_0000673
so part of: PLAG1
location: complement(7751197..7752450)
location: region:7751197-7752450:-1
so has part: feature:7751197-7752450:-1:exon

XP_029779411.1
type: Protein
SIO_000068: ncbiprotein

position:7752450:-1
position: 7752450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7751197-7752450:-1:exon

PLAG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: PLAG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein PLAG1 isoform X2
translation: MATHSPEKTHKCNYCEKMFHRKDHLKNHLHTHDPNKETFKCEECGKNYNTKLGFKRHLALHAATSGDLTCKVCLQTFESTGVLLEHLKSHAGKSSSGVKEKKHQCEHCDRRFYTRKDVRRHMVVHTGRKDFLCQYCAQRFGRKDHLTRHMKKSHNQELLKVKTEPVDFLDPFTCNVSVPIKDELLPVMSLPSSELLSKPFTNTLQLNLYNTPFQSMPSSGPAHQMITTLPLGMTCPIDMDAVHPSHHLSFKYPFSSTSYAISIPEKEQPLKGEIESYLMELQGGVPSSSQECQASSSKLGLDPPIGSLDDGAGDLSLSKSSISISDPLNTPALDFSQLFNFIPLNGPPYNPLSVGSLGMSYSQEEAHSSVSQLPPQTQDLQDPANTIGLGSLHSLSAAFTSSFSTSTTLPRFHQAFQ
SIO_010081: PLAG1
subclass of: SO_0000673
so part of: PLAG1
location: complement(7751197..7752450)
location: region:7751197-7752450:-1
so has part: feature:7751197-7752450:-1:exon

XP_029779412.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7751197-7752450:-1:exon

PLAG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: PLAG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein PLAG1 isoform X2
translation: MATHSPEKTHKCNYCEKMFHRKDHLKNHLHTHDPNKETFKCEECGKNYNTKLGFKRHLALHAATSGDLTCKVCLQTFESTGVLLEHLKSHAGKSSSGVKEKKHQCEHCDRRFYTRKDVRRHMVVHTGRKDFLCQYCAQRFGRKDHLTRHMKKSHNQELLKVKTEPVDFLDPFTCNVSVPIKDELLPVMSLPSSELLSKPFTNTLQLNLYNTPFQSMPSSGPAHQMITTLPLGMTCPIDMDAVHPSHHLSFKYPFSSTSYAISIPEKEQPLKGEIESYLMELQGGVPSSSQECQASSSKLGLDPPIGSLDDGAGDLSLSKSSISISDPLNTPALDFSQLFNFIPLNGPPYNPLSVGSLGMSYSQEEAHSSVSQLPPQTQDLQDPANTIGLGSLHSLSAAFTSSFSTSTTLPRFHQAFQ
SIO_010081: PLAG1
subclass of: SO_0000673
so part of: PLAG1
location: complement(7751197..7752450)
location: region:7751197-7752450:-1
so has part: feature:7751197-7752450:-1:exon

XP_029779413.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7751197-7752450:-1:exon

CHCHD7
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: CHCHD7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7797164..7803168
location: region:7797164-7803168:1
so has part: feature:7797164-7803168:1:exon
subclass of: SO_0000010

115279362
type: Gene
SIO_000068: ncbigene

position:7797164:1
position: 7797164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7803168:1
position: 7803168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7797164-7803168:1:exon

CHCHD7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: CHCHD7
product: coiled-coil-helix-coiled-coil-helix domain containing 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_029923915.1
SIO_010081: CHCHD7
subclass of: SO_0000673
so part of: CHCHD7
location: join(7797164..7797298,7800350..7800419,7802114..7802212,7802988..7803168)
location: region:7797164-7803168:1
so has part: feature:7797164-7797298:1:exon
so has part: feature:7800350-7800419:1:exon
so has part: feature:7802114-7802212:1:exon
so has part: feature:7802988-7803168:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7797164-7797298:1:exon

position:7797298:1
position: 7797298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7800350-7800419:1:exon

position:7800350:1
position: 7800350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7800419:1
position: 7800419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7802114-7802212:1:exon

position:7802114:1
position: 7802114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7802212:1
position: 7802212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7802988-7803168:1:exon

position:7802988:1
position: 7802988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CHCHD7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: CHCHD7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil-helix-coiled-coil-helix domain-containing protein 7
translation: MPMVARRLRDPDVNPCLSESDASTRCMDENNYDREKCSTYFLKYKNCRKFWNTVMVQRRQNGVQPSMPTATERDEILGAMGKMPY
SIO_010081: CHCHD7
subclass of: SO_0000673
so part of: CHCHD7
location: join(7800366..7800419,7802114..7802212,7802988..7803092)
location: region:7800366-7803092:1
so has part: feature:7800366-7800419:1:exon
so has part: feature:7802114-7802212:1:exon
so has part: feature:7802988-7803092:1:exon

XP_029779775.1
type: Protein
SIO_000068: ncbiprotein

position:7800366:1
position: 7800366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7803092:1
position: 7803092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7800366-7800419:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7802114-7802212:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7802988-7803092:1:exon

LOC115279587
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115279587
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 7810347..7810468
location: region:7810347-7810468:1
so has part: feature:7810347-7810468:1:exon

115279587
type: Gene
SIO_000068: ncbigene

position:7810347:1
position: 7810347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7810468:1
position: 7810468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7810347-7810468:1:exon

LOC115279587
type: Exon
subclass of: SO_0000147
RO_0002162: 37032
gene: LOC115279587
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00012
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC115279587
subclass of: SO_0000673
so part of: LOC115279587
location: 7810347..7810468
location: region:7810347-7810468:1
so has part: feature:7810347-7810468:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7810347-7810468:1:exon

SDR16C5
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: SDR16C5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7855209..7870845)
location: region:7855209-7870845:-1
so has part: feature:7855209-7870845:-1:exon
subclass of: SO_0000010

115278981
type: Gene
SIO_000068: ncbigene

position:7855209:-1
position: 7855209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7870845:-1
position: 7870845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7855209-7870845:-1:exon

SDR16C5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: SDR16C5
product: short chain dehydrogenase/reductase family 16C member 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_029923469.1
SIO_010081: SDR16C5
subclass of: SO_0000673
so part of: SDR16C5
location: complement(join(7855209..7855614,7857157..7857282,7858116..7858260,7859877..7859976,7866215..7866561,7870699..7870845))
location: region:7855209-7870845:-1
so has part: feature:7870699-7870845:-1:exon
so has part: feature:7866215-7866561:-1:exon
so has part: feature:7859877-7859976:-1:exon
so has part: feature:7858116-7858260:-1:exon
so has part: feature:7857157-7857282:-1:exon
so has part: feature:7855209-7855614:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7870699-7870845:-1:exon

position:7870699:-1
position: 7870699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7866215-7866561:-1:exon

position:7866215:-1
position: 7866215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7866561:-1
position: 7866561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7859877-7859976:-1:exon

position:7859877:-1
position: 7859877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7859976:-1
position: 7859976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7858116-7858260:-1:exon

position:7858116:-1
position: 7858116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7858260:-1
position: 7858260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7857157-7857282:-1:exon

position:7857157:-1
position: 7857157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7857282:-1
position: 7857282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7855209-7855614:-1:exon

position:7855614:-1
position: 7855614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SDR16C5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: SDR16C5
product: short chain dehydrogenase/reductase family 16C member 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_029923468.1
SIO_010081: SDR16C5
subclass of: SO_0000673
so part of: SDR16C5
location: complement(join(7855209..7855614,7857157..7857282,7858116..7858260,7859877..7859976,7861321..7861452,7866215..7866561,7870699..7870845))
location: region:7855209-7870845:-1
so has part: feature:7870699-7870845:-1:exon
so has part: feature:7866215-7866561:-1:exon
so has part: feature:7861321-7861452:-1:exon
so has part: feature:7859877-7859976:-1:exon
so has part: feature:7858116-7858260:-1:exon
so has part: feature:7857157-7857282:-1:exon
so has part: feature:7855209-7855614:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7870699-7870845:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7866215-7866561:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7861321-7861452:-1:exon

position:7861321:-1
position: 7861321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7861452:-1
position: 7861452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7859877-7859976:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7858116-7858260:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7857157-7857282:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7855209-7855614:-1:exon

SDR16C5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: SDR16C5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: epidermal retinol dehydrogenase 2 isoform X2
translation: MSSPSPALGPRKTPTGLSHNMASTLMFTKDLATFLGKSLIVLLETMIFTVIPRPRKSVAGEIVLITGAASGMGRLLALSFARLGAVVVLWDINKEGNEETCRMAREAGAVRVYAYTCDCSRREEVYRVAEQTYKCFLPAMIAKEHGHLVCISSSAGLVGVNKLADYCASKFAAYGFAESIFMETAAQKLKGIKTTIVCPFFVNTGMFEGCSSKRPFLLPILKPEYVVAKTIDAILQEKVYLYVPRLIYFMMFLKSILPVKIAVLLADFMGVFNVMDGFIYKNKKN
SIO_010081: SDR16C5
subclass of: SO_0000673
so part of: SDR16C5
location: complement(join(7855521..7855614,7857157..7857282,7858116..7858260,7859877..7859976,7866215..7866561,7870699..7870744))
location: region:7855521-7870744:-1
so has part: feature:7870699-7870744:-1:exon
so has part: feature:7866215-7866561:-1:exon
so has part: feature:7859877-7859976:-1:exon
so has part: feature:7858116-7858260:-1:exon
so has part: feature:7857157-7857282:-1:exon
so has part: feature:7855521-7855614:-1:exon

XP_029779329.1
type: Protein
SIO_000068: ncbiprotein

position:7855521:-1
position: 7855521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7870744:-1
position: 7870744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7870699-7870744:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7866215-7866561:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7859877-7859976:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7858116-7858260:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7857157-7857282:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7855521-7855614:-1:exon

SDR16C5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: SDR16C5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: epidermal retinol dehydrogenase 2 isoform X1
translation: MSSPSPALGPRKTPTGLSHNMASTLMFTKDLATFLGKSLIVLLETMIFTVIPRPRKSVAGEIVLITGAASGMGRLLALSFARLGAVVVLWDINKEGNEETCRMAREAGAVRVYAYTCDCSRREEVYRVAEQVKKEVGDVSILINNAGIVTGHGFLDCPEELIEKSLDVNFKAHLWTYKCFLPAMIAKEHGHLVCISSSAGLVGVNKLADYCASKFAAYGFAESIFMETAAQKLKGIKTTIVCPFFVNTGMFEGCSSKRPFLLPILKPEYVVAKTIDAILQEKVYLYVPRLIYFMMFLKSILPVKIAVLLADFMGVFNVMDGFIYKNKKN
SIO_010081: SDR16C5
subclass of: SO_0000673
so part of: SDR16C5
location: complement(join(7855521..7855614,7857157..7857282,7858116..7858260,7859877..7859976,7861321..7861452,7866215..7866561,7870699..7870744))
location: region:7855521-7870744:-1
so has part: feature:7870699-7870744:-1:exon
so has part: feature:7866215-7866561:-1:exon
so has part: feature:7861321-7861452:-1:exon
so has part: feature:7859877-7859976:-1:exon
so has part: feature:7858116-7858260:-1:exon
so has part: feature:7857157-7857282:-1:exon
so has part: feature:7855521-7855614:-1:exon

XP_029779328.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7870699-7870744:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7866215-7866561:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7861321-7861452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7859877-7859976:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7858116-7858260:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7857157-7857282:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7855521-7855614:-1:exon

PENK
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: PENK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7942598..7947522)
location: region:7942598-7947522:-1
so has part: feature:7942598-7947522:-1:exon
subclass of: SO_0000010

115278993
type: Gene
SIO_000068: ncbigene

position:7942598:-1
position: 7942598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7947522:-1
position: 7947522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7942598-7947522:-1:exon

PENK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: PENK
product: proenkephalin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_029923495.1
SIO_010081: PENK
subclass of: SO_0000673
so part of: PENK
location: complement(join(7942598..7943563,7946697..7946837,7947326..7947522))
location: region:7942598-7947522:-1
so has part: feature:7947326-7947522:-1:exon
so has part: feature:7946697-7946837:-1:exon
so has part: feature:7942598-7943563:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7947326-7947522:-1:exon

position:7947326:-1
position: 7947326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7946697-7946837:-1:exon

position:7946697:-1
position: 7946697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7946837:-1
position: 7946837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7942598-7943563:-1:exon

position:7943563:-1
position: 7943563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PENK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: PENK
product: proenkephalin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_029923496.1
SIO_010081: PENK
subclass of: SO_0000673
so part of: PENK
location: complement(join(7942598..7943563,7946697..7946837,7947141..7947251))
location: region:7942598-7947251:-1
so has part: feature:7947141-7947251:-1:exon
so has part: feature:7946697-7946837:-1:exon
so has part: feature:7942598-7943563:-1:exon

position:7947251:-1
position: 7947251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7947141-7947251:-1:exon

position:7947141:-1
position: 7947141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7946697-7946837:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7942598-7943563:-1:exon

PENK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: PENK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proenkephalin-A isoform X1
translation: MSPTSLRHPRGVNPMARLLRLCAWLLALGPGLLATVRADCSHDCATCSYRLARPTDINPLACTLECEGKLPSLKTWATCKELLQLSQLELPQDGTSVLRESSKPEEGHALAKKYGGFMKRYGGFMKKMDELYPQGPEEEANAGEILAKRYGGFMKKDAEEEDTLANSSDLLKELLGTGENGDSGRHQEGSDDDVSKRYGGFMRALKRSPQLEDEAKELQKRYGGFMRRVGRPEWWMDYQKRYGGFLKRFADSLPSDEEGESYSKEVPEMEKRYGGFMRF
SIO_010081: PENK
subclass of: SO_0000673
so part of: PENK
location: complement(join(7942904..7943563,7946697..7946837,7947326..7947364))
location: region:7942904-7947364:-1
so has part: feature:7947326-7947364:-1:exon
so has part: feature:7946697-7946837:-1:exon
so has part: feature:7942904-7943563:-1:exon

XP_029779355.1
type: Protein
SIO_000068: ncbiprotein

position:7942904:-1
position: 7942904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7947364:-1
position: 7947364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7947326-7947364:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7946697-7946837:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7942904-7943563:-1:exon

PENK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: PENK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proenkephalin-A isoform X2
translation: MARLLRLCAWLLALGPGLLATVRADCSHDCATCSYRLARPTDINPLACTLECEGKLPSLKTWATCKELLQLSQLELPQDGTSVLRESSKPEEGHALAKKYGGFMKRYGGFMKKMDELYPQGPEEEANAGEILAKRYGGFMKKDAEEEDTLANSSDLLKELLGTGENGDSGRHQEGSDDDVSKRYGGFMRALKRSPQLEDEAKELQKRYGGFMRRVGRPEWWMDYQKRYGGFLKRFADSLPSDEEGESYSKEVPEMEKRYGGFMRF
SIO_010081: PENK
subclass of: SO_0000673
so part of: PENK
location: complement(join(7942904..7943563,7946697..7946834))
location: region:7942904-7946834:-1
so has part: feature:7946697-7946834:-1:exon
so has part: feature:7942904-7943563:-1:exon

XP_029779356.1
type: Protein
SIO_000068: ncbiprotein

position:7946834:-1
position: 7946834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7946697-7946834:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7942904-7943563:-1:exon

LOC115278994
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115278994
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7943265..7946296
location: region:7943265-7946296:1
so has part: feature:7943265-7946296:1:exon
subclass of: SO_0000011

115278994
type: Gene
SIO_000068: ncbigene

position:7943265:1
position: 7943265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7946296:1
position: 7946296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7943265-7946296:1:exon

LOC115278994
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115278994
product: uncharacterized LOC115278994, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003903151.1
SIO_010081: LOC115278994
subclass of: SO_0000673
so part of: LOC115278994
location: join(7943265..7943616,7946192..7946296)
location: region:7943265-7946296:1
so has part: feature:7943265-7943616:1:exon
so has part: feature:7946192-7946296:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7943265-7943616:1:exon

position:7943616:1
position: 7943616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7946192-7946296:1:exon

position:7946192:1
position: 7946192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115278994
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115278994
product: uncharacterized LOC115278994, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003903152.1
SIO_010081: LOC115278994
subclass of: SO_0000673
so part of: LOC115278994
location: join(7943986..7944051,7946192..7946296)
location: region:7943986-7946296:1
so has part: feature:7943986-7944051:1:exon
so has part: feature:7946192-7946296:1:exon

position:7943986:1
position: 7943986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7943986-7944051:1:exon

position:7944051:1
position: 7944051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7946192-7946296:1:exon

LOC115279458
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115279458
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8276608..8277283)
location: region:8276608-8277283:-1
so has part: feature:8276608-8277283:-1:exon
subclass of: SO_0000011

115279458
type: Gene
SIO_000068: ncbigene

position:8276608:-1
position: 8276608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8277283:-1
position: 8277283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8276608-8277283:-1:exon

LOC115279458
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115279458
product: uncharacterized LOC115279458
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003903450.1
SIO_010081: LOC115279458
subclass of: SO_0000673
so part of: LOC115279458
location: complement(join(8276608..8276889,8277122..8277283))
location: region:8276608-8277283:-1
so has part: feature:8277122-8277283:-1:exon
so has part: feature:8276608-8276889:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8277122-8277283:-1:exon

position:8277122:-1
position: 8277122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8276608-8276889:-1:exon

position:8276889:-1
position: 8276889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IMPAD1
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: IMPAD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8349841..8380007)
location: region:8349841-8380007:-1
so has part: feature:8349841-8380007:-1:exon
subclass of: SO_0000010

115278940
type: Gene
SIO_000068: ncbigene

position:8349841:-1
position: 8349841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8380007:-1
position: 8380007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8349841-8380007:-1:exon

IMPAD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 37032
gene: IMPAD1
product: inositol monophosphatase domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_029923430.1
SIO_010081: IMPAD1
subclass of: SO_0000673
so part of: IMPAD1
location: complement(join(8349841..8351454,8352893..8353054,8363166..8363261,8364326..8364488,8379816..8380007))
location: region:8349841-8380007:-1
so has part: feature:8379816-8380007:-1:exon
so has part: feature:8364326-8364488:-1:exon
so has part: feature:8363166-8363261:-1:exon
so has part: feature:8352893-8353054:-1:exon
so has part: feature:8349841-8351454:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8379816-8380007:-1:exon

position:8379816:-1
position: 8379816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8364326-8364488:-1:exon

position:8364326:-1
position: 8364326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8364488:-1
position: 8364488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8363166-8363261:-1:exon

position:8363166:-1
position: 8363166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8363261:-1
position: 8363261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8352893-8353054:-1:exon

position:8352893:-1
position: 8352893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8353054:-1
position: 8353054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8349841-8351454:-1:exon

position:8351454:-1
position: 8351454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IMPAD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 37032
gene: IMPAD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol monophosphatase 3
translation: MLAVSVLAAVRGGDEVRRVRESNVLHEKSKGKTREGADDKMTSGDVLSNRKMFYLLKTAFPNVQINTEERVDAADQEVIIWDRKIPEDILKEIGAPKEVPAESVTVWIDPLDATQEYTEDLRKYVTTMVCVAVNGKPVLGVIHKPFSEYTAWAMVDGGSNVRARTSYNQRTPSIVVSRSHSGMVKQVALQTFGNQTTIIPAGGAGYKVLALLDVPDKSQEKADLYIHVTYIKKWDICAGNAILKALGGHMTTLNGEEISYTGSDGIEGGLLASIRMNHQALVRKLPDLEKTGHK
SIO_010081: IMPAD1
subclass of: SO_0000673
so part of: IMPAD1
location: complement(join(8351183..8351454,8352893..8353054,8363166..8363261,8364326..8364488,8379816..8380007))
location: region:8351183-8380007:-1
so has part: feature:8379816-8380007:-1:exon
so has part: feature:8364326-8364488:-1:exon
so has part: feature:8363166-8363261:-1:exon
so has part: feature:8352893-8353054:-1:exon
so has part: feature:8351183-8351454:-1:exon

XP_029779290.1
type: Protein
SIO_000068: ncbiprotein

position:8351183:-1
position: 8351183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8379816-8380007:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8364326-8364488:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8363166-8363261:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8352893-8353054:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8351183-8351454:-1:exon

LOC115278942
type: Gene
subclass of: SO_0000704
RO_0002162: 37032
gene: LOC115278942
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8372582..8375143
location: region:8372582-8375143:1
so has part: feature:8372582-8375143:1:exon
subclass of: SO_0000011

115278942
type: Gene
SIO_000068: ncbigene

position:8372582:1
position: 8372582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8375143:1
position: 8375143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8372582-8375143:1:exon

LOC115278942
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 37032
nc RNA class: lncRNA
gene: LOC115278942
product: uncharacterized LOC115278942
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003903127.1
SIO_010081: LOC115278942
subclass of: SO_0000673
so part of: LOC115278942
location: join(8372582..8373049,8374300..8374363,8375001..8375143)
location: region:8372582-8375143:1
so has part: feature:8372582-8373049:1:exon
so has part: feature:8374300-8374363:1:exon
so has part: feature:8375001-8375143:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8372582-8373049:1:exon

position:8373049:1
position: 8373049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8374300-8374363:1:exon

position:8374300:1
position: 8374300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8374363:1
position: 8374363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8375001-8375143:1:exon