Arabidopsis thaliana ecotype Col-0 mitochondrion, complete genome.
mitochondrion Arabidopsis thaliana (thale cress)
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
Correction of Persistent Errors in Arabidopsis Reference Mitochondrial Genomes
Submitted (10-OCT-2018) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (03-OCT-2018) Department of Biology, Colorado State University, Campus Delivery 1878, Fort Collins, CO 80523, USA
Submitted (04-DEC-2017) Department of Biology, Colorado State University, Campus Delivery 1878, Fort Collins, CO 80523, USA
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to BK010421.\nCOMPLETENESS: full length.
cox2; C to U RNA editing; CTC(L) to TTC(F)
cox2; C to U RNA editing; TCT(S) to TTT(F)
cox2; C to U RNA editing (minor frequency); synonymous
cox2; C to U RNA editing (minor frequency); CTT(L) to TTT(F)
cox2; C to U RNA editing; CGG(R) to TGG(W)
cox2; C to U RNA editing; TCG(S) to TTG(L)
cox2; C to U RNA editing; TCA(S) to TTA(L)
cox2; C to U RNA editing; CCT(P) to CTT(L)
cox2; C to U RNA editing; ACG(T) to ATG(M)
cox2; C to U RNA editing; CCT(P) to TCT(S)
ccmB; C to U RNA editing; TCG(S) to TTG(L)
ccmB; C to U RNA editing (minor frequency); synonymous
ccmB; C to U RNA editing; TCT(S) to TTT(F)
ccmB; C to U RNA editing; TCC(S) to TTC(F)
ccmB; C to U RNA editing; TCA(S) to TTA(L)
ccmB; C to U RNA editing; CGT(R) to TGT(C)
ccmB; C to U RNA editing (minor frequency); CCC(P) to CTC(L)
ccmB; C to U RNA editing; CCA(P) to CTA(L)
ccmB; C to U RNA editing; CCA(P) to TTA(L)
ccmB; C to U RNA editing; CGG(R) to TGG(W)
ccmB; C to U RNA editing (minor frequency); CGA(R) to TGA(*)
ccmB; C to U RNA editing; CCT(P) to TTT(F)
ccmB; C to U RNA editing; CCT(P) to TCT(S)
ccmB; C to U RNA editing; CCT(P) to CTT(L)
ccmB; C to U RNA editing; CCG(P) to CTG(L)
ccmB; C to U RNA editing; CCG(P) to TTG(L)
ccmB; C to U RNA editing (minor frequency); TCC(S) to TTC(F)
ccmB; C to U RNA editing; CAT(H) to TAT(Y)
rps3; C to U RNA editing; CGG(R) to TGG(W)
rps3; C to U RNA editing (minor frequency); synonymous
rps3; C to U RNA editing (minor frequency); TCA(S) to TTA(L)
rps3; C to U RNA editing (minor frequency); CAA(Q) to TAA(*)
rps3; C to U RNA editing; TCG(S) to TTG(L)
rps3; C to U RNA editing; CCG(P) to CTG(L)
rps3; C to U RNA editing; CGT(R) to TGT(C)
rpl16; C to U RNA editing; CGG(R) to TGG(W)
rps3; C to U RNA editing; GCG(A) to GTG(V)
rpl16; C to U RNA editing (minor frequency); synonymous
rps3; C to U RNA editing (minor frequency); TCT(S) to TTT(F)
rpl16; C to U RNA editing; CAG(Q) to TAG(*); Internal stop codon may indicate rpl16 is a pseudogene or requires alternative start codon.
rps3; C to U RNA editing; TCA(S) to TTA(L)
rpl16; C to U RNA editing (minor frequency); TCA(S) to TTA(L)
rpl16; C to U RNA editing; ACT(T) to ATT(I)
rpl16; C to U RNA editing; CCA(P) to CTA(L)
rpl16; C to U RNA editing; TCG(S) to TTG(L)
C to U RNA editing (minor frequency); noncoding
nad9; C to U RNA editing; TCT(S) to TTT(F)
nad9; C to U RNA editing; TCG(S) to TTG(L)
nad9; C to U RNA editing; CAT(H) to TAT(Y)
nad9; C to U RNA editing; CCG(P) to TCG(S)
nad9; C to U RNA editing; CGG(R) to TGG(W)
nad9; C to U RNA editing (minor frequency); synonymous
nad9; C to U RNA editing; TCA(S) to TTA(L)
nad9; C to U RNA editing; CTT(L) to TTT(F)
nad9; C to U RNA editing (minor frequency); CAA(Q) to TAA(*)
nad5; C to U RNA editing; CCC(P) to CTC(L)
nad5; C to U RNA editing (minor frequency); synonymous
nad5; C to U RNA editing; ACC(T) to ATC(I)
nad5; C to U RNA editing; TCA(S) to TTA(L)
nad5; C to U RNA editing (minor frequency); GCA(A) to GTA(V)
nad5; C to U RNA editing; TCT(S) to TTT(F)
nad5; C to U RNA editing; CGT(R) to TGT(C)
nad5; C to U RNA editing; TCG(S) to TTG(L)
mutation in anticodon changed GAA(Phe) to GTA(Tyr); copy 1
atp6; C to U RNA editing; CCA(P) to TCA(S)
start codon produced by C-to-U RNA editing
nad1; C to U RNA editing; CCC(P) to TCC(S)
nad1; C to U RNA editing; CGT(R) to TGT(C)
nad1; C to U RNA editing; TCG(S) to TTG(L)
nad1; C to U RNA editing; TCT(S) to TTT(F)
nad1; C to U RNA editing; CTT(L) to TTT(F)
nad1; C to U RNA editing; TCA(S) to TTA(L)
atp1; C to U RNA editing; CCA(P) to CTA(L)
atp1; C to U RNA editing (minor frequency); synonymous
atp1; C to U RNA editing; CCG(P) to CTG(L)
atp1; C to U RNA editing; TCA(S) to TTA(L)
atp1; alternative 5' transcript end (minor frequency)
rps7; C to U RNA editing; TCA(S) to TTA(L)
nad1; C to U RNA editing; CGG(R) to TGG(W)
nad1; C to U RNA editing; CCG(P) to CTG(L)
nad1; C to U RNA editing; CCG(P) to TTG(L)
nad1; C to U RNA editing (minor frequency); synonymous
nad1; C to U RNA editing (minor frequency); CCA(P) to CTA(L)
nad1; C to U RNA editing; ACG(T) to ATG(M)
nad1; alternative 5' transcript end (minor frequency)
t-element (tRNA-like structure) in ORF291
nad2; C to U RNA editing; TCA(S) to TTA(L)
nad2; C to U RNA editing; TCC(S) to TTC(F)
nad2; C to U RNA editing; CGT(R) to TGT(C)
nad2; C to U RNA editing; CCA(P) to CTA(L)
nad2; C to U RNA editing; CCA(P) to TTA(L)
nad2; C to U RNA editing (minor frequency); synonymous
nad2; C to U RNA editing; TCG(S) to TTG(L)
nad2; C to U RNA editing; ACT(T) to ATT(I)
nad2; C to U RNA editing; CAT(H) to TAT(Y)
nad2; C to U RNA editing; CCT(P) to CTT(L)
nad2; C to U RNA editing; TCT(S) to TTT(F)
rps4; C to U RNA editing; TCA(S) to TTA(L)
rps4; C to U RNA editing; CGG(R) to TGG(W)
rps4; C to U RNA editing; CCG(P) to TCG(S)
rps4; C to U RNA editing; CCC(P) to TCC(S)
rps4; C to U RNA editing; CAT(H) to TAT(Y)
rps4; C to U RNA editing; CCA(P) to CTA(L)
rps4; C to U RNA editing; CCG(P) to CTG(L)
rps4; C to U RNA editing (minor frequency); CTC(L) to TTC(F)
rps4; C to U RNA editing (minor frequency); synonymous
rps4; C to U RNA editing; TCG(S) to TTG(L)
rps4; C to U RNA editing; TCT(S) to TTT(F)
rps4; C to U RNA editing; CCA(P) to TTA(L)
rps4; C to U RNA editing; CCT(P) to CTT(L)
nad2; C to U RNA editing; CCT(P) to TCT(S)
nad2; C to U RNA editing; CGC(R) to TGC(C)
nad6; C to U RNA editing; CCT(P) to CTT(L)
nad6; C to U RNA editing; GCA(A) to GTA(V)
nad6; C to U RNA editing; CCC(P) to TTC(F)
nad6; C to U RNA editing (minor frequency); synonymous
nad6; C to U RNA editing; CCA(P) to CTA(L)
nad6; C to U RNA editing; CGC(R) to TGC(C)
nad6; C to U RNA editing; CAT(H) to TAT(Y)
nad6; C to U RNA editing; TCA(S) to TTA(L)
nad6; C to U RNA editing (minor frequency); TCT(S) to TTT(F)
nad6; C to U RNA editing; TCT(S) to TTT(F)
nad6; C to U RNA editing; CCT(P) to TCT(S)
nad6; 3' transcript end occurs prior to first in-frame stop codon
cob; C to U RNA editing; CCT(P) to TCT(S)
cob; C to U RNA editing; CAC(H) to TAC(Y)
cob; C to U RNA editing (minor frequency); synonymous
cob; C to U RNA editing; CCA(P) to CTA(L)
cob; C to U RNA editing (minor frequency); synonymous due to other edits in codon
cob; C to U RNA editing; CAT(H) to TAT(Y)
cob; C to U RNA editing (minor frequency); ACC(T) to ATC(I)
cob; C to U RNA editing; CTT(L) to TTT(F)
cob; C to U RNA editing; CCG(P) to TCG(S)
rps14; C to U RNA editing (minor frequency); TCC(S) to TTC(F)
rps14; C to U RNA editing (minor frequency); synonymous
rpl5; C to U RNA editing; CCA(P) to CTA(L)
rpl5; C to U RNA editing; TCG(S) to TTG(L)
rpl5; C to U RNA editing (minor frequency); synonymous
rpl5; C to U RNA editing; CGC(R) to TGC(C)
rpl5; C to U RNA editing (minor frequency); CCC(P) to TCC(S)
rpl5; C to U RNA editing; CAC(H) to TAC(Y)
rpl5; C to U RNA editing; CCG(P) to CTG(L)
rpl5; C to U RNA editing (minor frequency); CCG(P) to TTG(L)
rpl5; C to U RNA editing; TCA(S) to TTA(L)
ccmFC; C to U RNA editing; CCT(P) to CTT(L)
ccmFC; C to U RNA editing; CCC(P) to TCC(S)
ccmFC; C to U RNA editing (minor frequency); TCC(S) to TTC(F)
ccmFC; C to U RNA editing; TCC(S) to TTC(F)
ccmFC; C to U RNA editing; TCA(S) to TTA(L)
ccmFC; C to U RNA editing; CCT(P) to TCT(S)
ccmFC; C to U RNA editing (minor frequency); synonymous
ccmFC; C to U RNA editing; CGT(R) to TGT(C)
ccmFC; C to U RNA editing; CTC(L) to TTC(F)
ccmFC; C to U RNA editing (minor frequency); CGG(R) to TGG(W)
ccmFC; C to U RNA editing (minor frequency); CAT(H) to TAT(Y)
ccmFC; C to U RNA editing (minor frequency); CCG(P) to TCG(S)
ccmFC; C to U RNA editing; TCG(S) to TTG(L)
ccmFC; C to U RNA editing; CGG(R) to TGG(W)
ccmFC; C to U RNA editing (minor frequency); CAG(Q) to TAG(*)
ccmFC; C to U RNA editing (minor frequency); CAA(Q) to TAA(*)
ccmFC; C to U RNA editing; CGA(R) to TGA(*)
ccmFC; alternative 3' transcript end (minor frequency)
nad4; C to U RNA editing; CCG(P) to CTG(L)
nad4; C to U RNA editing; CAC(H) to TAC(Y)
nad4; C to U RNA editing; CGG(R) to TGG(W)
nad4; C to U RNA editing (minor frequency); synonymous
nad4; C to U RNA editing; TCC(S) to TTC(F)
nad4; C to U RNA editing; TCA(S) to TTA(L)
nad4; C to U RNA editing; TCT(S) to TTT(F)
nad4; C to U RNA editing; CTC(L) to TTC(F)
nad4; C to U RNA editing; CCT(P) to TCT(S)
nad4; C to U RNA editing; CCT(P) to CTT(L)
nad4; C to U RNA editing (minor frequency); CTT(L) to TTT(F)
nad4; C to U RNA editing; CCA(P) to CTA(L)
nad4; C to U RNA editing; CCC(P) to TTC(F)
nad4; C to U RNA editing; CGC(R) to TGC(C)
nad4; C to U RNA editing; CGT(R) to TGT(C)
nad4; C to U RNA editing; ACA(T) to ATA(I)
nad4; C to U RNA editing (minor frequency); TCT(S) to TTT(F)
nad4; C to U RNA editing (minor frequency); TCA(S) to TTA(L)
nad4; C to U RNA editing; ACT(T) to ATT(I)
mttB; 3' transcript end occurs prior to first in-frame stop codon
mttB; C to U RNA editing; TCG(S) to TTG(L)
mttB; C to U RNA editing (minor frequency); synonymous
mttB; C to U RNA editing; CGT(R) to TGT(C)
mttB; C to U RNA editing (minor frequency); CCG(P) to TCG(S)
mttB; C to U RNA editing; TCC(S) to TTC(F)
mttB; C to U RNA editing (minor frequency); ACA(T) to ATA(I)
mttB; C to U RNA editing; CTC(L) to TTC(F)
mttB; C to U RNA editing; CCG(P) to TCG(S)
mttB; C to U RNA editing; CCA(P) to CTA(L)
mttB; C to U RNA editing (minor frequency); synonymous due to other edits in codon
mttB; C to U RNA editing; CCA(P) to TCA(S)
mttB; C to U RNA editing; CAT(H) to TAT(Y)
mttB; C to U RNA editing (minor frequency); TCA(S) to TTA(L)
mttB; C to U RNA editing (minor frequency); CCC(P) to CTC(L)
mttB; C to U RNA editing; CGG(R) to TGG(W)
mttB; C to U RNA editing; CCC(P) to TCC(S)
mttB; C to U RNA editing; CCT(P) to TTT(F)
mttB; C to U RNA editing; CGC(R) to TGC(C)
mttB; C to U RNA editing (minor frequency); TCT(S) to TTT(F)
mttB; C to U RNA editing (minor frequency); CCC(P) to TCC(S)
mttB; C to U RNA editing; TCA(S) to TTA(L)
mttB; C to U RNA editing; TCT(S) to TTT(F)
mttB; C to U RNA editing (minor frequency); CGA(R) to TGA(*)
mttB; C to U RNA editing (minor frequency); ACG(T) to ATG(M)
rpl2; C to U RNA editing (minor frequency); synonymous
rpl2; C to U RNA editing (minor frequency); CCT(P) to TCT(S)
rpl2; C to U RNA editing; CCA(P) to CTA(L)
rpl2; alternative 5' transcript end (minor frequency)
matR; C to U RNA editing; CCA(P) to CTA(L)
matR; C to U RNA editing (minor frequency); CAG(Q) to TAG(*)
matR; C to U RNA editing; TCG(S) to TTG(L)
matR; C to U RNA editing (minor frequency); TCG(S) to TTG(L)
matR; C to U RNA editing (minor frequency); synonymous
matR; C to U RNA editing (minor frequency); CGG(R) to TGG(W)
matR; C to U RNA editing; TCC(S) to TTC(F)
matR; C to U RNA editing; CCT(P) to CTT(L)
matR; C to U RNA editing; CGC(R) to TGC(C)
matR; C to U RNA editing; CAC(H) to TAC(Y)
matR; C to U RNA editing; TCA(S) to TTA(L)
matR; C to U RNA editing (minor frequency); CCC(P) to CTC(L)
nad1; C to U RNA editing; CCA(P) to CTA(L)
nad1; C to U RNA editing; CTC(L) to TTC(F)
nad5; C to U RNA editing; CCG(P) to CTG(L)
nad5; C to U RNA editing; CCG(P) to CTG(X)
nad5; C to U RNA editing; TCC(S) to TTC(F)
nad5; C to U RNA editing; CTT(L) to TTT(F)
nad5; C to U RNA editing; CCA(P) to CTA(L)
nad5; C to U RNA editing; ACA(T) to ATA(I)
nad5; C to U RNA editing; GCC(A) to GTC(V)
nad5; C to U RNA editing; CCA(P) to TCA(S)
nad5; C to U RNA editing; ACG(T) to ATG(M)
nad7; C to U RNA editing; CCA(P) to CTA(L)
nad7; C to U RNA editing; TCT(S) to TTT(F)
nad7; C to U RNA editing; TCA(S) to TTA(L)
nad7; C to U RNA editing (minor frequency); synonymous
nad7; C to U RNA editing; CGT(R) to TGT(C)
nad7; C to U RNA editing (minor frequency); ACC(T) to ATC(I)
nad7; C to U RNA editing; CGC(R) to TGC(C)
nad7; C to U RNA editing; CTT(L) to TTT(F)
nad7; C to U RNA editing; TCG(S) to TTG(L)
nad7; C to U RNA editing; CAT(H) to TAT(Y)
nad7; C to U RNA editing; CCA(P) to TCA(S)
nad7; C to U RNA editing (minor frequency); CCA(P) to TCA(S)
nad7; alternative 5' transcript end (minor frequency)
atp8; C to U RNA editing (minor frequency); synonymous
atp8; C to U RNA editing (minor frequency); TCA(S) to TTA(L)
anticodon:CAT; C assumed to be post-transcriptionally modified to lysidine, which pairs with A, not G (see PubMed ID 1698276)
atp6; alternative 5' transcript end (minor frequency)
atp9; C to U RNA editing; CCA(P) to CTA(L)
atp9; C to U RNA editing; TCA(S) to TTA(L)
atp9; C to U RNA editing (minor frequency); synonymous
mutation in anticodon changed GAA(Phe) to GTA(Tyr); copy 2
ORF114; C to U RNA editing (minor frequency); synonymous
nad3; C to U RNA editing; TCA(S) to TTA(L)
nad3; C to U RNA editing; TCT(S) to TTT(F)
nad3; C to U RNA editing; CCA(P) to CTA(L)
nad3; C to U RNA editing (minor frequency); synonymous
nad3; C to U RNA editing; TCC(S) to TTC(F)
nad3; C to U RNA editing; CCT(P) to TTT(F)
nad3; C to U RNA editing; CCT(P) to TCT(S)
nad3; C to U RNA editing; CCC(P) to CTC(L)
nad3; C to U RNA editing; TCG(S) to TTG(L)
nad3; C to U RNA editing; CGG(R) to TGG(W)
rps12; C to U RNA editing; CCG(P) to CTG(L)
rps12; C to U RNA editing; CCA(P) to CTA(L)
rps12; C to U RNA editing (minor frequency); synonymous
rps12; C to U RNA editing; CAC(H) to TAC(Y)
rps12; C to U RNA editing; TCG(S) to TTG(L)
rps12; C to U RNA editing; TCC(S) to TTC(F)
rps12; C to U RNA editing (minor frequency); CCG(P) to TCG(S)
rps12; C to U RNA editing (minor frequency); CCG(P) to CTG(L)
rps12; C to U RNA editing (minor frequency); CGA(R) to TGA(*)
ccmFN2; C to U RNA editing (minor frequency); ACC(T) to ATC(I)
ccmFN2; C to U RNA editing; TCG(S) to TTG(L)
ccmFN2; C to U RNA editing (minor frequency); synonymous
ccmFN2; C to U RNA editing; CCA(P) to CTA(L)
ccmFN2; C to U RNA editing; CGG(R) to TGG(W)
ccmFN2; C to U RNA editing; CGT(R) to TGT(C)
ccmFN2; C to U RNA editing; TCA(S) to TTA(L)
ccmFN2; C to U RNA editing; CCC(P) to TCC(S)
ccmC; C to U RNA editing; CAT(H) to TAT(Y)
ccmC; C to U RNA editing; CTT(L) to TTT(F)
ccmC; C to U RNA editing (minor frequency); CCT(P) to CTT(L)
ccmC; C to U RNA editing; GCG(A) to GTG(V)
ccmC; C to U RNA editing; CGG(R) to TGG(W)
ccmC; C to U RNA editing (minor frequency); synonymous
ccmC; C to U RNA editing; TCG(S) to TTG(L)
ccmC; C to U RNA editing; CGT(R) to TGT(C)
ccmC; C to U RNA editing; CCT(P) to TCT(S)
ccmC; C to U RNA editing; CCG(P) to CTG(L)
ccmC; C to U RNA editing; TCA(S) to TTA(L)
ccmC; C to U RNA editing; GCT(A) to GTT(V)
ccmC; C to U RNA editing; TCT(S) to TTT(F)
ccmC; C to U RNA editing; CCC(P) to CTC(L)
ccmC; C to U RNA editing; CCT(P) to CTT(L)
ccmC; C to U RNA editing (minor frequency); synonymous due to other edits in codon
ccmC; C to U RNA editing; CCA(P) to CTA(L)
ccmC; 3' transcript end occurs prior to first in-frame stop codon
ccmFN1; C to U RNA editing; CCT(P) to CTT(L)
ccmFN1; C to U RNA editing (minor frequency); CTT(L) to TTT(F)
ccmFN1; C to U RNA editing; TCG(S) to TTG(L)
ccmFN1; C to U RNA editing; CCT(P) to TCT(S)
ccmFN1; C to U RNA editing (minor frequency); synonymous
ccmFN1; C to U RNA editing (minor frequency); CCT(P) to CTT(L)
ccmFN1; C to U RNA editing; CGG(R) to TGG(W)
ccmFN1; C to U RNA editing; CCA(P) to CTA(L)
ccmFN1; C to U RNA editing; CTT(L) to TTT(F)
ccmFN1; C to U RNA editing (minor frequency); TCG(S) to TTG(L)
ccmFN1; C to U RNA editing (minor frequency); TCT(S) to TTT(F)
ccmFN1; C to U RNA editing (minor frequency); CTC(L) to TTC(F)
ccmFN1; C to U RNA editing (minor frequency); CCC(P) to TCC(S)
ccmFN1; C to U RNA editing (minor frequency); CGT(R) to TGT(C)
ccmFN1; C to U RNA editing (minor frequency); CAT(H) to TAT(Y)
ccmFN1; C to U RNA editing; CCT(P) to TTT(F)
ccmFN1; C to U RNA editing; TCA(S) to TTA(L)
ccmFN1; C to U RNA editing; CGC(R) to TGC(C)
mutation in anticodon changed GAA(Phe) to GTA(Tyr); copy 3
cox3; C to U RNA editing (minor frequency); synonymous
cox3; C to U RNA editing; CCT(P) to CTT(L)
cox3; C to U RNA editing; TCT(S) to TTT(F)
cox3; C to U RNA editing; CCA(P) to TCA(S)
ORF240A; C to U RNA editing (minor frequency); CGG(R) to TGG(W)
mutation in anticodon changed GAA(Phe) to GTA(Tyr); copy 4
nad4L; C to U RNA editing; TCT(S) to TTT(F)
nad4L; C to U RNA editing; CGG(R) to TGG(W)
nad4L; C to U RNA editing; CCT(P) to CTT(L)
nad4L; C to U RNA editing; TCA(S) to TTA(L)
nad4L; C to U RNA editing; CCA(P) to TCA(S)
nad4L; C to U RNA editing; TCG(S) to TTG(L)
nad4L; C to U RNA editing; CCA(P) to CTA(L)
atp4; C to U RNA editing; TCA(S) to TTA(L)
atp4; C to U RNA editing (minor frequency); synonymous
atp4; C to U RNA editing; TCG(S) to TTG(L)
atp4; C to U RNA editing; CCT(P) to CTT(L)
atp4; C to U RNA editing; CCG(P) to TTG(L)
atp4; C to U RNA editing; CCG(P) to CTG(L)
atp4; C to U RNA editing; ACT(T) to ATT(I)