Populus trichocarpa chloroplast, complete genome.
type: Entry
definition: Populus trichocarpa chloroplast, complete genome.
sequence version: NC_009143.1
sequence date: 2023-04-03
sequence: sequence
division: PLN
label: NC_009143.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA927338
keyword: RefSeq
source: chloroplast Populus trichocarpa (Populus balsamifera subsp. trichocarpa)
organism: Populus trichocarpa
taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus.
reference: 1
references: 16973872
reference: 2
reference: 3
comment: PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence was derived from EF489041.\nURL -- http://www.jgi.doe.gov/poplar\nJGI Project ID: 2773012\nSource DNA available from H.D. 'Toby' Bradshaw\n(toby@u.washington.edu) and Lee E. Gunter (gunterle@ornl.gov)\nContacts: Gerald Tuskan (tuskanga@ornl.gov)\n Daniel Rokhsar (DSRokhsar@lbl.gov)\nThe DNA was isolated from a single genotype, Nisqually-1, that was\nclonally replicated at multiple locations. The DNA itself came from\nleaf tissue at the University of Washington, Seattle, WA and root\ntissue at Oak Ridge National Laboratory, Oak Ridge, TN.\nThe genome sequence is available under WGS project AARH00000000.\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000820
sequence length: 157033
topology: circular
so has quality: SO_0000988
location: 1..157033
location: region:1-157033:1
RO_0002162: 3694

NC_009143
type: RefSeq
SIO_000068: refseq

PRJNA927338
type: BioProject
SIO_000068: bioproject

1
title: The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)
author: Tuskan, G.A.
author: Difazio, S.
author: Jansson, S.
author: Bohlmann, J.
author: Grigoriev, I.
author: Hellsten, U.
author: Putnam, N.
author: Ralph, S.
author: Rombauts, S.
author: Salamov, A.
author: Schein, J.
author: Sterck, L.
author: Aerts, A.
author: Bhalerao, R.R.
author: Bhalerao, R.P.
author: Blaudez, D.
author: Boerjan, W.
author: Brun, A.
author: Brunner, A.
author: Busov, V.
author: Campbell, M.
author: Carlson, J.
author: Chalot, M.
author: Chapman, J.
author: Chen, G.L.
author: Cooper, D.
author: Coutinho, P.M.
author: Couturier, J.
author: Covert, S.
author: Cronk, Q.
author: Cunningham, R.
author: Davis, J.
author: Degroeve, S.
author: Dejardin, A.
author: Depamphilis, C.
author: Detter, J.
author: Dirks, B.
author: Dubchak, I.
author: Duplessis, S.
author: Ehlting, J.
author: Ellis, B.
author: Gendler, K.
author: Goodstein, D.
author: Gribskov, M.
author: Grimwood, J.
author: Groover, A.
author: Gunter, L.
author: Hamberger, B.
author: Heinze, B.
author: Helariutta, Y.
author: Henrissat, B.
author: Holligan, D.
author: Holt, R.
author: Huang, W.
author: Islam-Faridi, N.
author: Jones, S.
author: Jones-Rhoades, M.
author: Jorgensen, R.
author: Joshi, C.
author: Kangasjarvi, J.
author: Karlsson, J.
author: Kelleher, C.
author: Kirkpatrick, R.
author: Kirst, M.
author: Kohler, A.
author: Kalluri, U.
author: Larimer, F.
author: Leebens-Mack, J.
author: Leple, J.C.
author: Locascio, P.
author: Lou, Y.
author: Lucas, S.
author: Martin, F.
author: Montanini, B.
author: Napoli, C.
author: Nelson, D.R.
author: Nelson, C.
author: Nieminen, K.

16973872
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
journal: Submitted (26-MAR-2007) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

3
title: Direct Submission
author: Lucas, S.
author: Hammon, N.
author: Glavina del Rio, T.
author: Detter, J.
author: Dalin, E.
author: Tice, H.
author: Pitluck, S.
author: Tuskan, G.
author: Chapman, J.
author: Putnam, N.H.
author: Salamov, A.A.
author: Terry, A.
author: Grigoriev, I.V.
author: Rokhsar, D.
journal: Submitted (13-MAR-2007) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157033:1
position: 157033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-157033:1:source
so part of: sequence
organism: Populus trichocarpa
organelle: plastid:chloroplast
mol type: genomic DNA

3694
type: Taxonomy
SIO_000068: taxonomy

Poptr_cp071
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: rps12
locus tag: Poptr_cp071
trans splicing: true
so part of: sequence
location: complement(join(99446..100239,70463..70576))
location: region:70463-100239:-1
so has part: feature:70463-70576:-1:exon
so has part: feature:99446-100239:-1:exon
subclass of: SO_0000010

4929628
type: Gene
SIO_000068: ncbigene

position:70463:-1
position: 70463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100239:-1
position: 100239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70463-70576:-1:exon

position:70576:-1
position: 70576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:99446-100239:-1:exon

position:99446:-1
position: 99446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Poptr_cp071
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: rps12
locus tag: Poptr_cp071
inference: similar to AA sequence:SP:NP_054910
exception: nonconsensus splice site
codon start: 1
transl table: 11
product: ribosomal protein S12
translation: MPTIKQLIRNTRQPIRNVTKSPALGGCPQRRGTCTRVYTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRSQYGVKKPK
SIO_010081: Poptr_cp071
subclass of: SO_0000673
so part of: Poptr_cp071
location: complement(join(99446..99472,100009..100239,70463..70576))
location: region:70463-100239:-1
so has part: feature:70463-70576:-1:exon
so has part: feature:100009-100239:-1:exon
so has part: feature:99446-99472:-1:exon

YP_001109479.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70463-70576:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:100009-100239:-1:exon

position:100009:-1
position: 100009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:99446-99472:-1:exon

position:99472:-1
position: 99472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Poptr_cpR001
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cpR001
so part of: sequence
location: complement(4..77)
location: region:4-77:-1
so has part: feature:4-77:-1:exon
subclass of: SO_0000663

4929697
type: Gene
SIO_000068: ncbigene

position:4:-1
position: 4
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77:-1
position: 77
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4-77:-1:exon

Poptr_cpR001
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3694
locus tag: Poptr_cpR001
product: tRNA-His
SIO_010081: Poptr_cpR001
subclass of: SO_0000673
so part of: Poptr_cpR001
location: complement(4..77)
location: region:4-77:-1
so has part: feature:4-77:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4-77:-1:exon

Poptr_cp001
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: psbA
locus tag: Poptr_cp001
so part of: sequence
location: complement(318..1379)
location: region:318-1379:-1
so has part: feature:318-1379:-1:exon
subclass of: SO_0000010

4929629
type: Gene
SIO_000068: ncbigene

position:318:-1
position: 318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1379:-1
position: 1379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318-1379:-1:exon

Poptr_cp001
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: psbA
locus tag: Poptr_cp001
inference: similar to AA sequence:SP:PSBA_ARATH
note: PSII 32 kDa protein; photosystem II 32 kDa protein
codon start: 1
transl table: 11
product: photosystem II protein D1
translation: MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSTNG
SIO_010081: Poptr_cp001
subclass of: SO_0000673
so part of: Poptr_cp001
location: complement(318..1379)
location: region:318-1379:-1
so has part: feature:318-1379:-1:exon

YP_001109480.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:318-1379:-1:exon

Poptr_cpR002
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: trnK
locus tag: Poptr_cpR002
so part of: sequence
location: complement(1681..4309)
location: region:1681-4309:-1
so has part: feature:1681-4309:-1:exon
subclass of: SO_0000663

4929630
type: Gene
SIO_000068: ncbigene

position:1681:-1
position: 1681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4309:-1
position: 4309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1681-4309:-1:exon

Poptr_cpR002
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3694
gene: trnK
locus tag: Poptr_cpR002
product: tRNA-Lys
SIO_010081: Poptr_cpR002
subclass of: SO_0000673
so part of: Poptr_cpR002
location: complement(join(1681..1715,4273..4309))
location: region:1681-4309:-1
so has part: feature:4273-4309:-1:exon
so has part: feature:1681-1715:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4273-4309:-1:exon

position:4273:-1
position: 4273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1681-1715:-1:exon

position:1715:-1
position: 1715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Poptr_cp002
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: matK
locus tag: Poptr_cp002
so part of: sequence
location: complement(1981..3513)
location: region:1981-3513:-1
so has part: feature:1981-3513:-1:exon
subclass of: SO_0000010

4929631
type: Gene
SIO_000068: ncbigene

position:1981:-1
position: 1981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3513:-1
position: 3513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1981-3513:-1:exon

Poptr_cp002
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: matK
locus tag: Poptr_cp002
inference: similar to AA sequence:SP:MATK_ARATH
note: orf within trnK intron
codon start: 1
transl table: 11
product: maturase K
translation: MKIEKSQRNLEIDRSRKNDFLYPLIFREYIYTFAHDRDLNRSILLENVGYDNKYSLLIVKRLITRMYQQNHLIISANDSNQNTFFRYNKNLYFQMISEGFAVIVEIPFSLRLVSSLESSEIVKSHNLRSIHSIFPFLEGKFPHLNYLSEGLIPYPIHLEKLVQILRYWVKDPSSLHLLRLFLHEYWNLNSLIIPKKSISFFVKKNQRFFLFLYNSHVYEYESVFFFLCKQSFHFRLTFYQVFLERIYFYGKIEHFVEVFTKDWGDSLCLLKDPFIHYIRYQGKSIFVSKDTPLLMKKWKYYLVNLCQCHFDVCFQPQKIHINPFSLYKHSFALLGYLSSSSVRLNLSVVRSQMLENAFLMDNIMNKLDTTVSIIPLIGSLAKMKFCNAVGHPISKPTWADFSDSDIIDRFVRICRNLSHYYSGSSRKKSLYRIKYILRLSCVKTLARKHKSTVRIFLKRLGSELLEEFFTEEEQILFLIFPRASSISQKLYRGRVWYLDIICINELSNHE
SIO_010081: Poptr_cp002
subclass of: SO_0000673
so part of: Poptr_cp002
location: complement(1981..3513)
location: region:1981-3513:-1
so has part: feature:1981-3513:-1:exon

YP_001109481.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1981-3513:-1:exon

Poptr_cpR003
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cpR003
so part of: sequence
location: complement(5586..5657)
location: region:5586-5657:-1
so has part: feature:5586-5657:-1:exon
subclass of: SO_0000663

4929632
type: Gene
SIO_000068: ncbigene

position:5586:-1
position: 5586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5657:-1
position: 5657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5586-5657:-1:exon

Poptr_cpR003
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3694
locus tag: Poptr_cpR003
product: tRNA-Gln
SIO_010081: Poptr_cpR003
subclass of: SO_0000673
so part of: Poptr_cpR003
location: complement(5586..5657)
location: region:5586-5657:-1
so has part: feature:5586-5657:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5586-5657:-1:exon

Poptr_cp003
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: psbK
locus tag: Poptr_cp003
so part of: sequence
location: 6006..6200
location: region:6006-6200:1
so has part: feature:6006-6200:1:exon
subclass of: SO_0000010

4929633
type: Gene
SIO_000068: ncbigene

position:6006:1
position: 6006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6200:1
position: 6200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6006-6200:1:exon

Poptr_cp003
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: psbK
locus tag: Poptr_cp003
inference: similar to AA sequence:SP:PSBK_ARATH
note: PSII K protein
codon start: 1
transl table: 11
product: photosystem II protein K
translation: MFVMLNILNLICICLNFALYSSSFFFTKLPEAYAFLNPIVDVMPVIPLFFFLLAFVWQAAVSFR
SIO_010081: Poptr_cp003
subclass of: SO_0000673
so part of: Poptr_cp003
location: 6006..6200
location: region:6006-6200:1
so has part: feature:6006-6200:1:exon

YP_001109482.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6006-6200:1:exon

Poptr_cp004
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: psbI
locus tag: Poptr_cp004
so part of: sequence
location: 6615..6725
location: region:6615-6725:1
so has part: feature:6615-6725:1:exon
subclass of: SO_0000010

4929634
type: Gene
SIO_000068: ncbigene

position:6615:1
position: 6615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6725:1
position: 6725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6615-6725:1:exon

Poptr_cp004
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: psbI
locus tag: Poptr_cp004
inference: similar to AA sequence:SP:PSBI_ARATH
note: PSII I protein
codon start: 1
transl table: 11
product: photosystem II protein I
translation: MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
SIO_010081: Poptr_cp004
subclass of: SO_0000673
so part of: Poptr_cp004
location: 6615..6725
location: region:6615-6725:1
so has part: feature:6615-6725:1:exon

YP_001109483.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6615-6725:1:exon

Poptr_cpR004
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cpR004
so part of: sequence
location: complement(6876..6963)
location: region:6876-6963:-1
so has part: feature:6876-6963:-1:exon
subclass of: SO_0000663

4929635
type: Gene
SIO_000068: ncbigene

position:6876:-1
position: 6876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6963:-1
position: 6963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6876-6963:-1:exon

Poptr_cpR004
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3694
locus tag: Poptr_cpR004
product: tRNA-Ser
SIO_010081: Poptr_cpR004
subclass of: SO_0000673
so part of: Poptr_cpR004
location: complement(6876..6963)
location: region:6876-6963:-1
so has part: feature:6876-6963:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6876-6963:-1:exon

Poptr_cpR005
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cpR005
so part of: sequence
location: 7710..8479
location: region:7710-8479:1
so has part: feature:7710-8479:1:exon
subclass of: SO_0000663

4929636
type: Gene
SIO_000068: ncbigene

position:7710:1
position: 7710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8479:1
position: 8479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7710-8479:1:exon

Poptr_cpR005
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3694
locus tag: Poptr_cpR005
product: tRNA-Gly
SIO_010081: Poptr_cpR005
subclass of: SO_0000673
so part of: Poptr_cpR005
location: join(7710..7732,8432..8479)
location: region:7710-8479:1
so has part: feature:7710-7732:1:exon
so has part: feature:8432-8479:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7710-7732:1:exon

position:7732:1
position: 7732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8432-8479:1:exon

position:8432:1
position: 8432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Poptr_cpR006
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cpR006
so part of: sequence
location: 8706..8777
location: region:8706-8777:1
so has part: feature:8706-8777:1:exon
subclass of: SO_0000663

4929637
type: Gene
SIO_000068: ncbigene

position:8706:1
position: 8706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8777:1
position: 8777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8706-8777:1:exon

Poptr_cpR006
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3694
locus tag: Poptr_cpR006
product: tRNA-Arg
SIO_010081: Poptr_cpR006
subclass of: SO_0000673
so part of: Poptr_cpR006
location: 8706..8777
location: region:8706-8777:1
so has part: feature:8706-8777:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8706-8777:1:exon

Poptr_cp005
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: atpA
locus tag: Poptr_cp005
so part of: sequence
location: complement(8920..10443)
location: region:8920-10443:-1
so has part: feature:8920-10443:-1:exon
subclass of: SO_0000010

4929638
type: Gene
SIO_000068: ncbigene

position:8920:-1
position: 8920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10443:-1
position: 10443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8920-10443:-1:exon

Poptr_cp005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: atpA
locus tag: Poptr_cp005
EC number: 7.1.2.2
inference: similar to AA sequence:SP:ATPA_ARATH
note: ATPase alpha subunit
codon start: 1
transl table: 11
product: ATP synthase CF1 alpha subunit
translation: MVTIRADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGAISSSESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIGQKASSVAQVVNALQERGAMEYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKPSSSLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQAAPFTVAEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTSKTQFQEIISSTKTFTEEAEALLKEAIQEQMERFLLQEQV
SIO_010081: Poptr_cp005
subclass of: SO_0000673
so part of: Poptr_cp005
location: complement(8920..10443)
location: region:8920-10443:-1
so has part: feature:8920-10443:-1:exon

YP_001109484.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8920-10443:-1:exon

Poptr_cp006
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: atpF
locus tag: Poptr_cp006
so part of: sequence
location: complement(10501..11780)
location: region:10501-11780:-1
so has part: feature:10501-11780:-1:exon
subclass of: SO_0000010

4929639
type: Gene
SIO_000068: ncbigene

position:10501:-1
position: 10501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11780:-1
position: 11780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10501-11780:-1:exon

Poptr_cp006
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: atpF
locus tag: Poptr_cp006
EC number: 7.1.2.2
inference: similar to AA sequence:SP:ATPF_ARATH
exception: nonconsensus splice site
note: ATPase I subunit; ATP synthetase I subunit
codon start: 1
transl table: 11
product: ATP synthase CF0 B subunit
translation: MKNITDSFVSLGHWSSAGSFGFNTDILATNPINLSVVLGVLIFFGKGVLSDLLDNRKQRILNTIRNSEELRGGAIEQLEKARARLRKVEIEADQFRVNGYSEIEREKLNLINSTYKTLEQLENYKNETIHFEQQRAINQVRQRVFQQALQGALGTLNSCLTNELHLRTISANIGMFGAMKEITN
SIO_010081: Poptr_cp006
subclass of: SO_0000673
so part of: Poptr_cp006
location: complement(join(10501..10911,11637..11780))
location: region:10501-11780:-1
so has part: feature:11637-11780:-1:exon
so has part: feature:10501-10911:-1:exon

YP_001109485.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11637-11780:-1:exon

position:11637:-1
position: 11637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10501-10911:-1:exon

position:10911:-1
position: 10911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Poptr_cp007
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: atpH
locus tag: Poptr_cp007
so part of: sequence
location: complement(12221..12466)
location: region:12221-12466:-1
so has part: feature:12221-12466:-1:exon
subclass of: SO_0000010

4929640
type: Gene
SIO_000068: ncbigene

position:12221:-1
position: 12221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12466:-1
position: 12466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12221-12466:-1:exon

Poptr_cp007
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: atpH
locus tag: Poptr_cp007
EC number: 7.1.2.2
inference: similar to AA sequence:SP:ATPH_ARATH
note: ATP synthase CF0 C chain
codon start: 1
transl table: 11
product: ATP synthase CF0 C subunit
translation: MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV
SIO_010081: Poptr_cp007
subclass of: SO_0000673
so part of: Poptr_cp007
location: complement(12221..12466)
location: region:12221-12466:-1
so has part: feature:12221-12466:-1:exon

YP_001109486.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12221-12466:-1:exon

Poptr_cp008
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: atpI
locus tag: Poptr_cp008
so part of: sequence
location: complement(13476..14219)
location: region:13476-14219:-1
so has part: feature:13476-14219:-1:exon
subclass of: SO_0000010

4929641
type: Gene
SIO_000068: ncbigene

position:13476:-1
position: 13476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14219:-1
position: 14219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13476-14219:-1:exon

Poptr_cp008
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: atpI
locus tag: Poptr_cp008
EC number: 7.1.2.2
inference: similar to AA sequence:SP:ATPI_ARATH
note: ATP synthase CF0 A chain
codon start: 1
transl table: 11
product: ATP synthase CF0 A subunit
translation: MNVLSYSINTLKGLYEISGVEVGQHFYWKIGGFQVHAQVLITSWVVIVILLGSAIVTVRNPQTIPTDGQNFFEYILEFIRDVSKTQIGEEYGPWVPFIGTLFLFIFVSNWSGALLPWKIIELPHGELAAPTNDINTTVALALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPSVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH
SIO_010081: Poptr_cp008
subclass of: SO_0000673
so part of: Poptr_cp008
location: complement(13476..14219)
location: region:13476-14219:-1
so has part: feature:13476-14219:-1:exon

YP_001109487.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13476-14219:-1:exon

Poptr_cp009
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: rps2
locus tag: Poptr_cp009
so part of: sequence
location: complement(14428..15138)
location: region:14428-15138:-1
so has part: feature:14428-15138:-1:exon
subclass of: SO_0000010

4929642
type: Gene
SIO_000068: ncbigene

position:14428:-1
position: 14428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15138:-1
position: 15138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14428-15138:-1:exon

Poptr_cp009
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: rps2
locus tag: Poptr_cp009
inference: similar to AA sequence:SP:RR2_ARATH
codon start: 1
transl table: 11
product: ribosomal protein S2
translation: MIRRYWNINLKEMLETGVHFGHATRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRRKQFLIVGTKNKAADPVARAAIRARCHYVNKKWLGGLLTNWSTTEMRLQKFRDLRMEQKTGGIHRLPKGDAARLKRQLFHLQTYLGGIKYMTGLPDIVIIVDQQEEYMALQECITLGIPTICLIDTNCDPDLTDISIPANDDAIASIRLILNKLVFAICEGRSSYIRNP
SIO_010081: Poptr_cp009
subclass of: SO_0000673
so part of: Poptr_cp009
location: complement(14428..15138)
location: region:14428-15138:-1
so has part: feature:14428-15138:-1:exon

YP_001109488.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14428-15138:-1:exon

Poptr_cp010
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: rpoC2
locus tag: Poptr_cp010
so part of: sequence
location: complement(15439..19611)
location: region:15439-19611:-1
so has part: feature:15439-19611:-1:exon
subclass of: SO_0000010

4929643
type: Gene
SIO_000068: ncbigene

position:15439:-1
position: 15439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19611:-1
position: 19611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15439-19611:-1:exon

Poptr_cp010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: rpoC2
locus tag: Poptr_cp010
EC number: 2.7.7.6
inference: similar to AA sequence:SP:RPOD_ARATH
note: one of four subunits of the minimal PEP RNA polymerase catalytic core
codon start: 1
transl table: 11
product: RNA polymerase beta'' subunit
translation: MAERANLFFHNKVIDGTAIKRIISRFIDHFGMAYTSHILDQVKTLGFHQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAIEKLRQSIEIWYATSEYLRQEMNPNFRMTEPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTTRGISVSSRNGMIPERIFIQTLIGRVLADNIYMGLRCIATRNQDIGIGLVNRFITFRTQPISIRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAPSNGKIKFNKGLVHPTRTRHGHPAFLCSMDLYVTIESQDIIHNVTIPPKSFLLVQNDQYVESEQVIAEIRSGTYTLNFTERVRKHIYSDSEGEMHWSTDVYHASEFTYSNVHLLPKTSHLWILSGGSCRSSIVPFSLHKDQDQINVHSLSVERGYISNPSVNNDKVKHKFFSSYLSSKSKKKSRILDYSDLNRMICTGFIYPTILHENSDLLAKRRKNRFIIPFQSIQEKELMSHSDILIEIPINGIFRRNSIFAYFDDPQYRRKSSGITKYVAIGVHSIVKKEDLVEYRGVKEFQPKYQMKVDRFFFIPEEVYILPESSSLMVRNNSIIGVDTQITLNTKSRVGGLIRIERKKKKMELKIFSGDIHFPRATDKISRYSGILIPPGTVKTNSKESKKVKNWIYVQRITPTKKKSFVLVRPVLIYERGDGINLERLFPPDLLQEKENLKLRIVNYILYGNGKPIQGISNTSIQLVRTCLVLNWNQDKKSSSIEEARVYFVEVSINGLIRDFLRIHLGKSRISYISRKRNDPSGLGLISDNGPDRTNINPFYSIYSKTRIPQSLKQNQGTISISTLLNRNMECQSLIILSSSNCFRMDPSNGVKSYNVIKESTKRDPIIPIRNLLGPLGTALQIANFYSFYHLLTHNQISVIKYLKLDNLKLKQTSKVLKYYLMDENGRIVNHDPYSNNVLNPFKLNWYFLHHNYHHNYCEETFTIINLGQFICENVCMTKNGPRLKSGQVLIVHADSVILRLAKPYLATPGATVHGHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISINLEKRVENWNECITRIVGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERAMRALEEAICYRTVFLGITRASLSTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLAHRSSQHKIIPFKTKKKNLFEGEMRDILFHHRELFDSCISKNFYNISEQSFIGFNDS
SIO_010081: Poptr_cp010
subclass of: SO_0000673
so part of: Poptr_cp010
location: complement(15439..19611)
location: region:15439-19611:-1
so has part: feature:15439-19611:-1:exon

YP_001109489.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15439-19611:-1:exon

Poptr_cp011
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: rpoC1
locus tag: Poptr_cp011
so part of: sequence
location: complement(19793..22641)
location: region:19793-22641:-1
so has part: feature:19793-22641:-1:exon
subclass of: SO_0000010

4929644
type: Gene
SIO_000068: ncbigene

position:19793:-1
position: 19793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22641:-1
position: 22641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19793-22641:-1:exon

Poptr_cp011
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: rpoC1
locus tag: Poptr_cp011
EC number: 2.7.7.6
inference: similar to AA sequence:SP:RPOC_ARATH
exception: nonconsensus splice site
note: RNA polymerase beta' subunit-1; RNA polymerase beta' subunit
codon start: 1
transl table: 11
product: RNA polymerase beta' subunit
translation: MNQNFSSMIDRYKHQQLRIGSVSPQQISAWTNKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRVIGDEKEEPKFCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKQLEGLVYCDFSFARPIAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQGFDTFRNREISTGAGAIRELLADLDLRIILDYSSLEWKELGEEGPTGNEWEDRKVGRRKDFLVRRVELAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETMLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHLASNIGVAKSKIREKEPIVWGILQEVMRGHPILLNRAPTLHRLGIQAFQPILVEGRAICLHPLVRKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLMGLYVLTSGNRRGICANRYNPFNCRNFQNEKIDANANKDKYIKEPFFCNSYDAIGAYRQKRINLESPLWLRWQLDQGLIASREAPIEGHFGSLGTYHEIYGHYLIVRSIKKKILSIYIRTTVGHIYLYREIEEAIQGFCQACSDGT
SIO_010081: Poptr_cp011
subclass of: SO_0000673
so part of: Poptr_cp011
location: complement(join(19793..21409,22189..22641))
location: region:19793-22641:-1
so has part: feature:22189-22641:-1:exon
so has part: feature:19793-21409:-1:exon

YP_001109490.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22189-22641:-1:exon

position:22189:-1
position: 22189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:19793-21409:-1:exon

position:21409:-1
position: 21409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Poptr_cp012
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: rpoB
locus tag: Poptr_cp012
so part of: sequence
location: complement(22647..25859)
location: region:22647-25859:-1
so has part: feature:22647-25859:-1:exon
subclass of: SO_0000010

4929645
type: Gene
SIO_000068: ncbigene

position:22647:-1
position: 22647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25859:-1
position: 25859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22647-25859:-1:exon

Poptr_cp012
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: rpoB
locus tag: Poptr_cp012
EC number: 2.7.7.6
inference: similar to AA sequence:SP:RPOB_ARATH
note: one of four subunits of the minimal PEP RNA polymerase catalytic core
codon start: 1
transl table: 11
product: RNA polymerase beta subunit
translation: MLGDGNGGMSTIPGFNQIQFEGFCRFIDQGLAEELYKFPKIEDRDQEIEFQLFVETYQLVEPSIKERDAVYESLTYSSELYVSGGLIWKNSRDMQEQTIFIGNIPLMNSLGTSIVNGIYRIVINQILQSPGIYYRSELNHNGISVYTGTIISDWGGRVELEIDKKARIWARVSRKQKISILVLSSAMGLNLREILENVCYPEIFLSFLSDKEKKKIGSRENAILEFYQQFTCVGGGPVFSESLCKELQKKFFQQRCELGRIGRLNMNQRLNLDIPHNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALIRLENVVRGTICGAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLTIHAKIGHLGSLESPFYEISARSKKVRMLYLSPNRDEYYMIAAGNCLALNRGAREEQVVPARYRQEFLTIAWEQVRLRSFFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLARSEKCIVGTGLERQVALDSGVPAIAEHEGKIIYTDIDKIILSGNGYTVSIPLVMYQRSNKNTCMHQKTQVQRGKCIKRGQVLADGAATVGGELALGKNILVAYMPWEGYNFEDAVLISERLVYEDVYTSFHIRKYEIQTHVTSQGPERITNEIPHLEAHLLRNLDKNGIVMLGSWVETGDILIGKLTPQLAKESSYAPEDRLLRAILGIQVSTSKETCLKLPTGGRGRVIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQDGAPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRVAPFDERYEQEASRKLVFSELYEAGKQTGNPWVFEPECPGKSRIFDGRTGDPFEQPVIIGKPYILKLIHQVADKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVSHILQEMLTYKSDHIRARQEVLGTTISGRTIPKPEDAPESFRLLVRELRSLALELKHFLISEKNFQINRKEV
SIO_010081: Poptr_cp012
subclass of: SO_0000673
so part of: Poptr_cp012
location: complement(22647..25859)
location: region:22647-25859:-1
so has part: feature:22647-25859:-1:exon

YP_001109491.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22647-25859:-1:exon

Poptr_cpR007
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cpR007
so part of: sequence
location: 27078..27148
location: region:27078-27148:1
so has part: feature:27078-27148:1:exon
subclass of: SO_0000663

4929646
type: Gene
SIO_000068: ncbigene

position:27078:1
position: 27078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27148:1
position: 27148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27078-27148:1:exon

Poptr_cpR007
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3694
locus tag: Poptr_cpR007
product: tRNA-Cys
SIO_010081: Poptr_cpR007
subclass of: SO_0000673
so part of: Poptr_cpR007
location: 27078..27148
location: region:27078-27148:1
so has part: feature:27078-27148:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27078-27148:1:exon

Poptr_cp013
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: petN
locus tag: Poptr_cp013
so part of: sequence
location: 27541..27630
location: region:27541-27630:1
so has part: feature:27541-27630:1:exon
subclass of: SO_0000010

4929647
type: Gene
SIO_000068: ncbigene

position:27541:1
position: 27541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27630:1
position: 27630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27541-27630:1:exon

Poptr_cp013
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: petN
locus tag: Poptr_cp013
note: ycf6
codon start: 1
transl table: 11
product: cytochrome b6/f complex subunit VIII
translation: MDIVSLAWAALMVVFTFSLSLVVWGRSGL
SIO_010081: Poptr_cp013
subclass of: SO_0000673
so part of: Poptr_cp013
location: 27541..27630
location: region:27541-27630:1
so has part: feature:27541-27630:1:exon

YP_001109492.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27541-27630:1:exon

Poptr_cp014
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: psbM
locus tag: Poptr_cp014
so part of: sequence
location: complement(28932..29036)
location: region:28932-29036:-1
so has part: feature:28932-29036:-1:exon
subclass of: SO_0000010

4929648
type: Gene
SIO_000068: ncbigene

position:28932:-1
position: 28932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29036:-1
position: 29036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28932-29036:-1:exon

Poptr_cp014
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: psbM
locus tag: Poptr_cp014
inference: similar to AA sequence:SP:PSBM_ARATH
note: PSII low MW protein
codon start: 1
transl table: 11
product: photosystem II protein M
translation: MEVNILAFIATALFILVPTAFLLIIYVKTVSQSD
SIO_010081: Poptr_cp014
subclass of: SO_0000673
so part of: Poptr_cp014
location: complement(28932..29036)
location: region:28932-29036:-1
so has part: feature:28932-29036:-1:exon

YP_001109493.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28932-29036:-1:exon

Poptr_cpR008
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cpR008
so part of: sequence
location: complement(30270..30343)
location: region:30270-30343:-1
so has part: feature:30270-30343:-1:exon
subclass of: SO_0000663

4929649
type: Gene
SIO_000068: ncbigene

position:30270:-1
position: 30270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30343:-1
position: 30343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30270-30343:-1:exon

Poptr_cpR008
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3694
locus tag: Poptr_cpR008
product: tRNA-Asp
SIO_010081: Poptr_cpR008
subclass of: SO_0000673
so part of: Poptr_cpR008
location: complement(30270..30343)
location: region:30270-30343:-1
so has part: feature:30270-30343:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30270-30343:-1:exon

Poptr_cpR009
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cpR009
so part of: sequence
location: complement(30808..30891)
location: region:30808-30891:-1
so has part: feature:30808-30891:-1:exon
subclass of: SO_0000663

4929650
type: Gene
SIO_000068: ncbigene

position:30808:-1
position: 30808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30891:-1
position: 30891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30808-30891:-1:exon

Poptr_cpR009
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3694
locus tag: Poptr_cpR009
product: tRNA-Tyr
SIO_010081: Poptr_cpR009
subclass of: SO_0000673
so part of: Poptr_cpR009
location: complement(30808..30891)
location: region:30808-30891:-1
so has part: feature:30808-30891:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30808-30891:-1:exon

Poptr_cpR010
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cpR010
so part of: sequence
location: complement(30951..31023)
location: region:30951-31023:-1
so has part: feature:30951-31023:-1:exon
subclass of: SO_0000663

4929651
type: Gene
SIO_000068: ncbigene

position:30951:-1
position: 30951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31023:-1
position: 31023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30951-31023:-1:exon

Poptr_cpR010
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3694
locus tag: Poptr_cpR010
product: tRNA-Glu
SIO_010081: Poptr_cpR010
subclass of: SO_0000673
so part of: Poptr_cpR010
location: complement(30951..31023)
location: region:30951-31023:-1
so has part: feature:30951-31023:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30951-31023:-1:exon

Poptr_cpR011
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cpR011
so part of: sequence
location: 31264..31335
location: region:31264-31335:1
so has part: feature:31264-31335:1:exon
subclass of: SO_0000663

4929652
type: Gene
SIO_000068: ncbigene

position:31264:1
position: 31264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31335:1
position: 31335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31264-31335:1:exon

Poptr_cpR011
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3694
locus tag: Poptr_cpR011
product: tRNA-Thr
SIO_010081: Poptr_cpR011
subclass of: SO_0000673
so part of: Poptr_cpR011
location: 31264..31335
location: region:31264-31335:1
so has part: feature:31264-31335:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:31264-31335:1:exon

Poptr_cp015
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cp015
so part of: sequence
location: complement(31685..31855)
location: region:31685-31855:-1
so has part: feature:31685-31855:-1:exon
subclass of: SO_0000010

4929653
type: Gene
SIO_000068: ncbigene

position:31685:-1
position: 31685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31855:-1
position: 31855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31685-31855:-1:exon

Poptr_cp015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
locus tag: Poptr_cp015
note: orf supported by Populus leaf EST
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNQKYRQIFFFGVQRNMKMKEKSGSTVPISSISNLTIRIVDIVMIQWVRSTYFFFC
SIO_010081: Poptr_cp015
subclass of: SO_0000673
so part of: Poptr_cp015
location: complement(31685..31855)
location: region:31685-31855:-1
so has part: feature:31685-31855:-1:exon

YP_001109494.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31685-31855:-1:exon

Poptr_cp016
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: psbD
locus tag: Poptr_cp016
so part of: sequence
location: 32775..33836
location: region:32775-33836:1
so has part: feature:32775-33836:1:exon
subclass of: SO_0000010

4929654
type: Gene
SIO_000068: ncbigene

position:32775:1
position: 32775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33836:1
position: 33836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32775-33836:1:exon

Poptr_cp016
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: psbD
locus tag: Poptr_cp016
inference: similar to AA sequence:SP:PSBD_ARATH
note: PSII D2 protein; photosystem II D2 protein
codon start: 1
transl table: 11
product: photosystem II protein D2
translation: MTIALGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
SIO_010081: Poptr_cp016
subclass of: SO_0000673
so part of: Poptr_cp016
location: 32775..33836
location: region:32775-33836:1
so has part: feature:32775-33836:1:exon

YP_001109495.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32775-33836:1:exon

Poptr_cp017
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: psbC
locus tag: Poptr_cp017
so part of: sequence
location: 33784..35205
location: region:33784-35205:1
so has part: feature:33784-35205:1:exon
subclass of: SO_0000010

4929655
type: Gene
SIO_000068: ncbigene

position:33784:1
position: 33784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35205:1
position: 35205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33784-35205:1:exon

Poptr_cp017
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: psbC
locus tag: Poptr_cp017
inference: similar to AA sequence:SP:PSBC_ARATH
note: CP43
codon start: 1
transl table: 11
product: photosystem II 44 kDa protein
translation: MKTLYSLRRFYPVETLFNGTLALAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLGALAVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN
SIO_010081: Poptr_cp017
subclass of: SO_0000673
so part of: Poptr_cp017
location: 33784..35205
location: region:33784-35205:1
so has part: feature:33784-35205:1:exon

YP_001109496.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33784-35205:1:exon

Poptr_cpR012
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cpR012
so part of: sequence
location: complement(35441..35530)
location: region:35441-35530:-1
so has part: feature:35441-35530:-1:exon
subclass of: SO_0000663

4929656
type: Gene
SIO_000068: ncbigene

position:35441:-1
position: 35441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35530:-1
position: 35530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35441-35530:-1:exon

Poptr_cpR012
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3694
locus tag: Poptr_cpR012
product: tRNA-Ser
SIO_010081: Poptr_cpR012
subclass of: SO_0000673
so part of: Poptr_cpR012
location: complement(35441..35530)
location: region:35441-35530:-1
so has part: feature:35441-35530:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35441-35530:-1:exon

Poptr_cp018
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cp018
so part of: sequence
location: complement(35813..36154)
location: region:35813-36154:-1
so has part: feature:35813-36154:-1:exon
subclass of: SO_0000010

4929657
type: Gene
SIO_000068: ncbigene

position:35813:-1
position: 35813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36154:-1
position: 36154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35813-36154:-1:exon

Poptr_cp018
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
locus tag: Poptr_cp018
note: similar to spinach hypothetical protein
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRLATLKNWGRGLFHFCIWVQEMRELRIPTRKTNPIHNDVPENTTFLLLDQPSGEEKTTGTLINKIDEVAINAKTANWKAIVMFLILQATNKRTIPFDPSIRQKKTHHGGIIP
SIO_010081: Poptr_cp018
subclass of: SO_0000673
so part of: Poptr_cp018
location: complement(35813..36154)
location: region:35813-36154:-1
so has part: feature:35813-36154:-1:exon

YP_001109497.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35813-36154:-1:exon

Poptr_cp019
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: psbZ
locus tag: Poptr_cp019
so part of: sequence
location: 35907..36095
location: region:35907-36095:1
so has part: feature:35907-36095:1:exon
subclass of: SO_0000010

4929658
type: Gene
SIO_000068: ncbigene

position:35907:1
position: 35907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36095:1
position: 36095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35907-36095:1:exon

Poptr_cp019
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: psbZ
locus tag: Poptr_cp019
inference: similar to AA sequence:SP:NP_051056.1
inference: similar to AA sequence:SP:YCF9_ARATH
note: YCF9
codon start: 1
transl table: 11
product: photosystem II protein Z
translation: MTIAFQLAVFALIATSSILLISVPVVFSSPDGWSSNKNVVFSGTSLWIGLVFLVGILNSLIS
SIO_010081: Poptr_cp019
subclass of: SO_0000673
so part of: Poptr_cp019
location: 35907..36095
location: region:35907-36095:1
so has part: feature:35907-36095:1:exon

YP_001109498.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35907-36095:1:exon

Poptr_cpR013
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cpR013
so part of: sequence
location: 36696..36766
location: region:36696-36766:1
so has part: feature:36696-36766:1:exon
subclass of: SO_0000663

4929659
type: Gene
SIO_000068: ncbigene

position:36696:1
position: 36696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36766:1
position: 36766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36696-36766:1:exon

Poptr_cpR013
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3694
locus tag: Poptr_cpR013
product: tRNA-Gly
SIO_010081: Poptr_cpR013
subclass of: SO_0000673
so part of: Poptr_cpR013
location: 36696..36766
location: region:36696-36766:1
so has part: feature:36696-36766:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:36696-36766:1:exon

Poptr_cpR014
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cpR014
so part of: sequence
location: complement(36938..37011)
location: region:36938-37011:-1
so has part: feature:36938-37011:-1:exon
subclass of: SO_0000663

4929660
type: Gene
SIO_000068: ncbigene

position:36938:-1
position: 36938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37011:-1
position: 37011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36938-37011:-1:exon

Poptr_cpR014
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3694
locus tag: Poptr_cpR014
product: tRNA-Met
SIO_010081: Poptr_cpR014
subclass of: SO_0000673
so part of: Poptr_cpR014
location: complement(36938..37011)
location: region:36938-37011:-1
so has part: feature:36938-37011:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:36938-37011:-1:exon

Poptr_cp020
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: rps14
locus tag: Poptr_cp020
so part of: sequence
location: complement(37177..37479)
location: region:37177-37479:-1
so has part: feature:37177-37479:-1:exon
subclass of: SO_0000010

4929661
type: Gene
SIO_000068: ncbigene

position:37177:-1
position: 37177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37479:-1
position: 37479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37177-37479:-1:exon

Poptr_cp020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: rps14
locus tag: Poptr_cp020
inference: similar to AA sequence:SP:RR14_ARATH
codon start: 1
transl table: 11
product: ribosomal protein S14
translation: MARKSLIQREKKRQKLEQKYHLIRRSSKKEISKVPSLSDKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILRAKVHACLLPGATRSSW
SIO_010081: Poptr_cp020
subclass of: SO_0000673
so part of: Poptr_cp020
location: complement(37177..37479)
location: region:37177-37479:-1
so has part: feature:37177-37479:-1:exon

YP_001109499.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37177-37479:-1:exon

Poptr_cp021
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: psaB
locus tag: Poptr_cp021
so part of: sequence
location: complement(37598..39802)
location: region:37598-39802:-1
so has part: feature:37598-39802:-1:exon
subclass of: SO_0000010

4929662
type: Gene
SIO_000068: ncbigene

position:37598:-1
position: 37598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39802:-1
position: 39802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37598-39802:-1:exon

Poptr_cp021
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: psaB
locus tag: Poptr_cp021
inference: similar to AA sequence:SP:PSAB_ARATH
note: PsaB
codon start: 1
transl table: 11
product: photosystem I P700 chlorophyll a apoprotein A2
translation: MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLWTSGNLFHVAWQGNFETWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNEDLYIGALFLLFLSAVSLLGGWLHLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPGSRGESVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGTAILTLLGGFHPQTQSLWLTDMAHHHLAIAFLFLIAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAYAFIAQDFTTQAALYTHHQYIAGFIMTGAFAHGAIFFIRDYNPEQNEDNVLARMLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTNSPAFNAGRSIWLPGWLNAINENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHITLWQGNVSQFNESSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLAHFSVGYIFTYAAFLIASTSGKFG
SIO_010081: Poptr_cp021
subclass of: SO_0000673
so part of: Poptr_cp021
location: complement(37598..39802)
location: region:37598-39802:-1
so has part: feature:37598-39802:-1:exon

YP_001109500.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37598-39802:-1:exon

Poptr_cp022
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: psaA
locus tag: Poptr_cp022
so part of: sequence
location: complement(39828..42080)
location: region:39828-42080:-1
so has part: feature:39828-42080:-1:exon
subclass of: SO_0000010

4929663
type: Gene
SIO_000068: ncbigene

position:39828:-1
position: 39828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42080:-1
position: 42080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39828-42080:-1:exon

Poptr_cp022
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: psaA
locus tag: Poptr_cp022
inference: similar to AA sequence:SP:PSAA_ARATH
note: PsaA
codon start: 1
transl table: 11
product: photosystem I P700 chlorophyll a apoprotein A1
translation: MIIRSPEPEVKILVDRDPIKTSFEEWARPGHFSRTIAKGPDTTTWIWNLHADAHDFDSHTSDLEEISRKVFSAHFGQLSIIFLWLSGMYFHGARFSNYEAWLSDPTHIGPSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTAIGALVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLPINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWSKYSEFLTFRGGLDPVTGGLWLTDIAHHHLAIAILFLVAGHMYRTNWGIGHGIKDILEAHKGPFTGQGHKGLYEILTTSWHAQLSLNLAMLGSLTIVVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPGATAPGATASTSLTWGGDDLVAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNAISVVIFHFSWKMQSDVWGSISDQGVVTHITGGNFAQSSITINGWLRDFLWAQASQVIQSYGSSLSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIIQGRAVGVTHYLLGGIATTWAFFLARIIAVG
SIO_010081: Poptr_cp022
subclass of: SO_0000673
so part of: Poptr_cp022
location: complement(39828..42080)
location: region:39828-42080:-1
so has part: feature:39828-42080:-1:exon

YP_001109501.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39828-42080:-1:exon

Poptr_cp023
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: ycf3
locus tag: Poptr_cp023
so part of: sequence
location: complement(42698..44717)
location: region:42698-44717:-1
so has part: feature:42698-44717:-1:exon
subclass of: SO_0000010

4929664
type: Gene
SIO_000068: ncbigene

position:42698:-1
position: 42698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44717:-1
position: 44717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42698-44717:-1:exon

Poptr_cp023
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: ycf3
locus tag: Poptr_cp023
inference: similar to AA sequence:SP:NP_051060.1
exception: nonconsensus splice site
codon start: 1
transl table: 11
product: photosystem I assembly protein Ycf3
translation: MPRSRITGNLIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGMSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHYRGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAQNWLKITRRFE
SIO_010081: Poptr_cp023
subclass of: SO_0000673
so part of: Poptr_cp023
location: complement(join(42698..42850,43639..43866,44592..44717))
location: region:42698-44717:-1
so has part: feature:44592-44717:-1:exon
so has part: feature:43639-43866:-1:exon
so has part: feature:42698-42850:-1:exon

YP_001109502.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44592-44717:-1:exon

position:44592:-1
position: 44592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:43639-43866:-1:exon

position:43639:-1
position: 43639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43866:-1
position: 43866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:42698-42850:-1:exon

position:42850:-1
position: 42850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Poptr_cpR015
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cpR015
so part of: sequence
location: 45278..45364
location: region:45278-45364:1
so has part: feature:45278-45364:1:exon
subclass of: SO_0000663

4929665
type: Gene
SIO_000068: ncbigene

position:45278:1
position: 45278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45364:1
position: 45364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45278-45364:1:exon

Poptr_cpR015
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3694
locus tag: Poptr_cpR015
product: tRNA-Ser
SIO_010081: Poptr_cpR015
subclass of: SO_0000673
so part of: Poptr_cpR015
location: 45278..45364
location: region:45278-45364:1
so has part: feature:45278-45364:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:45278-45364:1:exon

Poptr_cp024
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: rps4
locus tag: Poptr_cp024
so part of: sequence
location: complement(45653..46258)
location: region:45653-46258:-1
so has part: feature:45653-46258:-1:exon
subclass of: SO_0000010

4929666
type: Gene
SIO_000068: ncbigene

position:45653:-1
position: 45653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46258:-1
position: 46258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45653-46258:-1:exon

Poptr_cp024
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: rps4
locus tag: Poptr_cp024
inference: similar to AA sequence:SP:RR4_ARATH
codon start: 1
transl table: 11
product: ribosomal protein S4
translation: MSRYRGPRFKKIRRLGALPGLTSKRPRAGSDLRNQSRAGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAAKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPRARQLVNHRHILVNGRIVDIPSYRCKPRDIITAKDEQKSRVMIQNSLDSFPQEELPKHLTLHPFQYKGLVNHIIDSKWIGLKINELLVVEYYSRQT
SIO_010081: Poptr_cp024
subclass of: SO_0000673
so part of: Poptr_cp024
location: complement(45653..46258)
location: region:45653-46258:-1
so has part: feature:45653-46258:-1:exon

YP_001109503.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45653-46258:-1:exon

Poptr_cpR016
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cpR016
so part of: sequence
location: complement(46482..46554)
location: region:46482-46554:-1
so has part: feature:46482-46554:-1:exon
subclass of: SO_0000663

4929667
type: Gene
SIO_000068: ncbigene

position:46482:-1
position: 46482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46554:-1
position: 46554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46482-46554:-1:exon

Poptr_cpR016
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3694
locus tag: Poptr_cpR016
product: tRNA-Thr
SIO_010081: Poptr_cpR016
subclass of: SO_0000673
so part of: Poptr_cpR016
location: complement(46482..46554)
location: region:46482-46554:-1
so has part: feature:46482-46554:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:46482-46554:-1:exon

Poptr_cpR017
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cpR017
so part of: sequence
location: 47028..47708
location: region:47028-47708:1
so has part: feature:47028-47708:1:exon
subclass of: SO_0000663

4929668
type: Gene
SIO_000068: ncbigene

position:47028:1
position: 47028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47708:1
position: 47708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47028-47708:1:exon

Poptr_cpR017
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3694
locus tag: Poptr_cpR017
product: tRNA-Leu
codon recognized: UUA
SIO_010081: Poptr_cpR017
subclass of: SO_0000673
so part of: Poptr_cpR017
location: join(47028..47062,47659..47708)
location: region:47028-47708:1
so has part: feature:47028-47062:1:exon
so has part: feature:47659-47708:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:47028-47062:1:exon

position:47062:1
position: 47062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:47659-47708:1:exon

position:47659:1
position: 47659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Poptr_cpR018
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cpR018
so part of: sequence
location: 48021..48093
location: region:48021-48093:1
so has part: feature:48021-48093:1:exon
subclass of: SO_0000663

4929669
type: Gene
SIO_000068: ncbigene

position:48021:1
position: 48021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48093:1
position: 48093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48021-48093:1:exon

Poptr_cpR018
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3694
locus tag: Poptr_cpR018
product: tRNA-Phe
SIO_010081: Poptr_cpR018
subclass of: SO_0000673
so part of: Poptr_cpR018
location: 48021..48093
location: region:48021-48093:1
so has part: feature:48021-48093:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:48021-48093:1:exon

Poptr_cp025
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: ndhJ
locus tag: Poptr_cp025
so part of: sequence
location: complement(48846..49325)
location: region:48846-49325:-1
so has part: feature:48846-49325:-1:exon
subclass of: SO_0000010

4929670
type: Gene
SIO_000068: ncbigene

position:48846:-1
position: 48846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49325:-1
position: 49325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48846-49325:-1:exon

Poptr_cp025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: ndhJ
locus tag: Poptr_cp025
EC number: 7.1.1.2
inference: similar to AA sequence:SP:NUGC_ARATH
note: similar to tabaco NADH dehydrogenase 30kD subunit
codon start: 1
transl table: 11
product: NADH dehydrogenase subunit J
translation: MRGPLSAWLVKHGLVHRSLGFDYQGIETLQIKPEDWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASIYHLTRIEYGILDQPEEVCIKVFAPRKNPRIPSVFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKDYIAPNFYEIQDAH
SIO_010081: Poptr_cp025
subclass of: SO_0000673
so part of: Poptr_cp025
location: complement(48846..49325)
location: region:48846-49325:-1
so has part: feature:48846-49325:-1:exon

YP_001109504.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48846-49325:-1:exon

Poptr_cp026
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: ndhK
locus tag: Poptr_cp026
so part of: sequence
location: complement(49433..50110)
location: region:49433-50110:-1
so has part: feature:49433-50110:-1:exon
subclass of: SO_0000010

4929671
type: Gene
SIO_000068: ncbigene

position:49433:-1
position: 49433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50110:-1
position: 50110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49433-50110:-1:exon

Poptr_cp026
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: ndhK
locus tag: Poptr_cp026
EC number: 7.1.1.2
inference: similar to AA sequence:SP:NUKC_ARATH
note: similar to NiTa NADH dehydrogenase 27kD subunit
codon start: 1
transl table: 11
product: NADH dehydrogenase subunit K
translation: MNSIEFPLLDRTTPISVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEQKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAIIDAITKLRKKISREIYEDRIRSQQGNRCFTTNHKFHIGRTTNTGNYDQGLLYQPPSTSKIAPEAFFKYKKSVSSPELVN
SIO_010081: Poptr_cp026
subclass of: SO_0000673
so part of: Poptr_cp026
location: complement(49433..50110)
location: region:49433-50110:-1
so has part: feature:49433-50110:-1:exon

YP_001109505.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49433-50110:-1:exon

Poptr_cp027
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: ndhC
locus tag: Poptr_cp027
so part of: sequence
location: complement(50171..50533)
location: region:50171-50533:-1
so has part: feature:50171-50533:-1:exon
subclass of: SO_0000010

4929672
type: Gene
SIO_000068: ncbigene

position:50171:-1
position: 50171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50533:-1
position: 50533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50171-50533:-1:exon

Poptr_cp027
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: ndhC
locus tag: Poptr_cp027
EC number: 7.1.1.2
inference: similar to AA sequence:SP:NU3C_ARATH
note: NADH dehydrogenase ND3 subunit
codon start: 1
transl table: 11
product: NADH dehydrogenase subunit 3
translation: MFLLYEYDIFWAFLIISSVIPILAFLISGLLSPIRKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS
SIO_010081: Poptr_cp027
subclass of: SO_0000673
so part of: Poptr_cp027
location: complement(50171..50533)
location: region:50171-50533:-1
so has part: feature:50171-50533:-1:exon

YP_001109506.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50171-50533:-1:exon

Poptr_cpR019
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cpR019
so part of: sequence
location: complement(51838..52514)
location: region:51838-52514:-1
so has part: feature:51838-52514:-1:exon
subclass of: SO_0000663

4929673
type: Gene
SIO_000068: ncbigene

position:51838:-1
position: 51838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52514:-1
position: 52514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51838-52514:-1:exon

Poptr_cpR019
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3694
locus tag: Poptr_cpR019
product: tRNA-Val
note: similar to NiTa tRNA-Val
SIO_010081: Poptr_cpR019
subclass of: SO_0000673
so part of: Poptr_cpR019
location: complement(join(51838..51872,52476..52514))
location: region:51838-52514:-1
so has part: feature:52476-52514:-1:exon
so has part: feature:51838-51872:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:52476-52514:-1:exon

position:52476:-1
position: 52476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:51838-51872:-1:exon

position:51872:-1
position: 51872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Poptr_cpR020
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cpR020
so part of: sequence
location: 52678..52750
location: region:52678-52750:1
so has part: feature:52678-52750:1:exon
subclass of: SO_0000663

4929674
type: Gene
SIO_000068: ncbigene

position:52678:1
position: 52678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52750:1
position: 52750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52678-52750:1:exon

Poptr_cpR020
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3694
locus tag: Poptr_cpR020
product: tRNA-Met
SIO_010081: Poptr_cpR020
subclass of: SO_0000673
so part of: Poptr_cpR020
location: 52678..52750
location: region:52678-52750:1
so has part: feature:52678-52750:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:52678-52750:1:exon

Poptr_cp028
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: atpE
locus tag: Poptr_cp028
so part of: sequence
location: complement(53027..53428)
location: region:53027-53428:-1
so has part: feature:53027-53428:-1:exon
subclass of: SO_0000010

4929675
type: Gene
SIO_000068: ncbigene

position:53027:-1
position: 53027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53428:-1
position: 53428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53027-53428:-1:exon

Poptr_cp028
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: atpE
locus tag: Poptr_cp028
EC number: 7.1.2.2
inference: similar to AA sequence:SP:ATPE_ARATH
note: ATPase epsilon subunit
codon start: 1
transl table: 11
product: ATP synthase CF1 epsilon subunit
translation: MILSLCVLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQWLTMALMGGFARIGNNEVTVLVNDAEKGSDIDPQEAQQTLEIAEANLRKAEGKRQIIEANLALRRARARVEAINVIS
SIO_010081: Poptr_cp028
subclass of: SO_0000673
so part of: Poptr_cp028
location: complement(53027..53428)
location: region:53027-53428:-1
so has part: feature:53027-53428:-1:exon

YP_001109507.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53027-53428:-1:exon

Poptr_cp029
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: atpB
locus tag: Poptr_cp029
so part of: sequence
location: complement(53425..54921)
location: region:53425-54921:-1
so has part: feature:53425-54921:-1:exon
subclass of: SO_0000010

4929676
type: Gene
SIO_000068: ncbigene

position:53425:-1
position: 53425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54921:-1
position: 54921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53425-54921:-1:exon

Poptr_cp029
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: atpB
locus tag: Poptr_cp029
EC number: 7.1.2.2
inference: similar to AA sequence:SP:ATPB_ARATH
note: ATPase beta subunit
codon start: 1
transl table: 11
product: ATP synthase CF1 beta subunit
translation: MRINPTTSGPGVSALEKKNLGHIAQIIGPVLDVVFPPGKMPNIYNALVVKGRDTVSQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVDTQITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDSLPEQAFYLVGNIDEATAKATNLEMENNLKK
SIO_010081: Poptr_cp029
subclass of: SO_0000673
so part of: Poptr_cp029
location: complement(53425..54921)
location: region:53425-54921:-1
so has part: feature:53425-54921:-1:exon

YP_001109508.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53425-54921:-1:exon

Poptr_cp030
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: rbcL
locus tag: Poptr_cp030
so part of: sequence
location: 55716..57143
location: region:55716-57143:1
so has part: feature:55716-57143:1:exon
subclass of: SO_0000010

4929677
type: Gene
SIO_000068: ncbigene

position:55716:1
position: 55716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57143:1
position: 57143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55716-57143:1:exon

Poptr_cp030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: rbcL
locus tag: Poptr_cp030
EC number: 4.1.1.39
inference: similar to AA sequence:SP:RBL_ORYSA
note: Rubisco large subunit
codon start: 1
transl table: 11
product: ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
translation: MSPQTETKAGVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVAGEENQFIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEALYKAQAETGEIKGHYLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGIHFRVLAKALRMSGGDHIHSGTVVGKLEGERDITLGFVDLLRDDFVEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNEIIREASKWSPELAAACEVWKEIKFEFQAMDTL
SIO_010081: Poptr_cp030
subclass of: SO_0000673
so part of: Poptr_cp030
location: 55716..57143
location: region:55716-57143:1
so has part: feature:55716-57143:1:exon

YP_001109509.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55716-57143:1:exon

Poptr_cp031
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cp031
so part of: sequence
location: complement(57350..57589)
location: region:57350-57589:-1
so has part: feature:57350-57589:-1:exon
subclass of: SO_0000010

4929678
type: Gene
SIO_000068: ncbigene

position:57350:-1
position: 57350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57589:-1
position: 57589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57350-57589:-1:exon

Poptr_cp031
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
locus tag: Poptr_cp031
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLCQIRIEKRKISFLLGILGRTFFVKSRLLITFYSNIERKGQYTGWVEEVVILGPTHDPKLRDIKEYTSLGLIRDLRQE
SIO_010081: Poptr_cp031
subclass of: SO_0000673
so part of: Poptr_cp031
location: complement(57350..57589)
location: region:57350-57589:-1
so has part: feature:57350-57589:-1:exon

YP_001109510.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57350-57589:-1:exon

Poptr_cp032
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: accD
locus tag: Poptr_cp032
so part of: sequence
location: 57800..59296
location: region:57800-59296:1
so has part: feature:57800-59296:1:exon
subclass of: SO_0000010

4929679
type: Gene
SIO_000068: ncbigene

position:57800:1
position: 57800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59296:1
position: 59296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57800-59296:1:exon

Poptr_cp032
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: accD
locus tag: Poptr_cp032
EC number: 6.4.1.2
inference: similar to AA sequence:SP:ACCD_ARATH
note: similar to NiTa acetyl-CoA carboxylase beta subunit
codon start: 1
transl table: 11
product: acetyl-CoA carboxylase beta subunit
translation: MKKCWFHSMLSNVELEYRCRLSKSMDNLGPLENTSVSEDPILNDTEKNTYNWSHSDSSNVDHLVGVRDIRNLNVDDTFLVLGRDNKKDGYSIYFDIENQVFGIDNNHSFLSKLEKEFSSYWNSSYLNKGSRSDDSHYDYSMYDNKYSWNNYINSCIDSYLRSQIGIASSILSGSESYSESYISTYILGESRNSSETGNSRLRTSTNGSDFALRENSNDLGVTQKYKHLWVQCEICYGLNYKKFFKSKMNICEQCGYHLKMSSSDRIELSIDPGTWDPMDEEMFSLDPIDFHSEEEPYKDRIDSYQKKTGLTEAIQTGIGQLNGIPVAIGVMDFQFMGGSMGSVVGEKITRLIEYATNQFLPLILVCASGGARMQEGSLSLMQMAKISSALYDYQSNKKLVYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAGKRVIEQTLNKTVPEGSQAAEFLFHKGLFDPIVPRNLLKGVLSELFQLHAFFPLNHNLSRTLT
SIO_010081: Poptr_cp032
subclass of: SO_0000673
so part of: Poptr_cp032
location: 57800..59296
location: region:57800-59296:1
so has part: feature:57800-59296:1:exon

YP_001109511.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57800-59296:1:exon

Poptr_cp033
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: psaI
locus tag: Poptr_cp033
so part of: sequence
location: 60008..60121
location: region:60008-60121:1
so has part: feature:60008-60121:1:exon
subclass of: SO_0000010

4929680
type: Gene
SIO_000068: ncbigene

position:60008:1
position: 60008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60121:1
position: 60121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60008-60121:1:exon

Poptr_cp033
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: psaI
locus tag: Poptr_cp033
inference: similar to AA sequence:SP:PSAI_ARATH
note: similar to NiTa photosystem I protein
codon start: 1
transl table: 11
product: photosystem I subunit VIII
translation: MTILNNLPSIFVPLVGLVFPAIAMASLSLHVQKNKIF
SIO_010081: Poptr_cp033
subclass of: SO_0000673
so part of: Poptr_cp033
location: 60008..60121
location: region:60008-60121:1
so has part: feature:60008-60121:1:exon

YP_001109512.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60008-60121:1:exon

Poptr_cp034
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: ycf4
locus tag: Poptr_cp034
so part of: sequence
location: 60545..61099
location: region:60545-61099:1
so has part: feature:60545-61099:1:exon
subclass of: SO_0000010

4929681
type: Gene
SIO_000068: ncbigene

position:60545:1
position: 60545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61099:1
position: 61099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60545-61099:1:exon

Poptr_cp034
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: ycf4
locus tag: Poptr_cp034
inference: similar to AA sequence:SP:NP_051070.1
inference: similar to AA sequence:SP:YCF4_ARATH
note: similar to photosytem I accumulation protein
codon start: 1
transl table: 11
product: photosystem I assembly protein Ycf4
translation: MSWRSEHIWIELIAGSRKISNFCWAIILFLGSLGFLLIGISSYLDRNLISLFPSQQILFFPQGIVMSFYGLAGLFISSYLWCTISWNVGSGYDRFDRKEGIVCIFRWGFPGKNRRILLRLFMKDIQSIRIEVKEGFYARRVLYMEIRGQGAIPLTRTDENLTPREIEQKAAELAYFLRVPIEVF
SIO_010081: Poptr_cp034
subclass of: SO_0000673
so part of: Poptr_cp034
location: 60545..61099
location: region:60545-61099:1
so has part: feature:60545-61099:1:exon

YP_001109513.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60545-61099:1:exon

Poptr_cp035
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: cemA
locus tag: Poptr_cp035
so part of: sequence
location: 61479..62165
location: region:61479-62165:1
so has part: feature:61479-62165:1:exon
subclass of: SO_0000010

4929682
type: Gene
SIO_000068: ncbigene

position:61479:1
position: 61479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62165:1
position: 62165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61479-62165:1:exon

Poptr_cp035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: cemA
locus tag: Poptr_cp035
inference: similar to AA sequence:SP:CEMA_ARATH
codon start: 1
transl table: 11
product: envelope membrane protein
translation: MEKKAFIPLLYLTSIVFLPWWVSFSFNKSLGSWIINWWNTSKSETFLNDIQEKSILEKLIEFEELFLLDEMIKEYPETHLQKFRIGIHKETIQLIKMHNADRIDTILHFSTNIICFVILSGYSFLVNEELFILNSWVQEFIYNLSDTIKALSILLLTDLCIGFHSPHGWELMISSFYKDFGFAHNDQIISGLVSTFPVIFDTIFKYWIFRYLNRVSPSLVVIYHSMND
SIO_010081: Poptr_cp035
subclass of: SO_0000673
so part of: Poptr_cp035
location: 61479..62165
location: region:61479-62165:1
so has part: feature:61479-62165:1:exon

YP_001109514.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61479-62165:1:exon

Poptr_cp036
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: petA
locus tag: Poptr_cp036
so part of: sequence
location: 62408..63370
location: region:62408-63370:1
so has part: feature:62408-63370:1:exon
subclass of: SO_0000010

4929683
type: Gene
SIO_000068: ncbigene

position:62408:1
position: 62408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63370:1
position: 63370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62408-63370:1:exon

Poptr_cp036
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: petA
locus tag: Poptr_cp036
inference: similar to AA sequence:SP:CYF_ORYSA
note: component of cytochrome b6/f complex
codon start: 1
transl table: 11
product: cytochrome f
translation: MQTRKTLSWIKEEITRSISVSLMIYIITGAYISNAYPIFAQQGYENPREATGRIVCANCHLANKPVGIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGKKGALNVGAVLILPEGFELAPPDRISPEMKEKIGNLSFQSYRPAKKNILVIGPVPGQKYSEITFPILSPDPAAKKDAHFLKYPIYVGGNRGRGQIYPDGSKSNNTVYNATAAGIVSKIIRKEKGGYEITITDAPEGRQVIDSIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLLFFLASVILAQIFLVLKKKQFEKVQLSEMNF
SIO_010081: Poptr_cp036
subclass of: SO_0000673
so part of: Poptr_cp036
location: 62408..63370
location: region:62408-63370:1
so has part: feature:62408-63370:1:exon

YP_001109515.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62408-63370:1:exon

Poptr_cp037
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: psbJ
locus tag: Poptr_cp037
so part of: sequence
location: complement(64323..64445)
location: region:64323-64445:-1
so has part: feature:64323-64445:-1:exon
subclass of: SO_0000010

4929684
type: Gene
SIO_000068: ncbigene

position:64323:-1
position: 64323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64445:-1
position: 64445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64323-64445:-1:exon

Poptr_cp037
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: psbJ
locus tag: Poptr_cp037
inference: similar to AA sequence:SP:PSBJ_ORYSA
note: photosystem II reaction center J
codon start: 1
transl table: 11
product: photosystem II protein J
translation: MADTTGRIPLWIIGTVTGIPVIGLIGIFFYGSYSGLGSSL
SIO_010081: Poptr_cp037
subclass of: SO_0000673
so part of: Poptr_cp037
location: complement(64323..64445)
location: region:64323-64445:-1
so has part: feature:64323-64445:-1:exon

YP_001109516.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64323-64445:-1:exon

Poptr_cp038
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: psbL
locus tag: Poptr_cp038
so part of: sequence
location: complement(64655..64771)
location: region:64655-64771:-1
so has part: feature:64655-64771:-1:exon
subclass of: SO_0000010

4929685
type: Gene
SIO_000068: ncbigene

position:64655:-1
position: 64655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64771:-1
position: 64771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64655-64771:-1:exon

Poptr_cp038
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: psbL
locus tag: Poptr_cp038
inference: similar to AA sequence:SP:PSBL_ARATH
note: photosystem II L protein
codon start: 1
transl table: 11
product: photosystem II protein L
translation: MTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
SIO_010081: Poptr_cp038
subclass of: SO_0000673
so part of: Poptr_cp038
location: complement(64655..64771)
location: region:64655-64771:-1
so has part: feature:64655-64771:-1:exon

YP_001109517.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64655-64771:-1:exon

Poptr_cp039
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: psbF
locus tag: Poptr_cp039
so part of: sequence
location: complement(64804..64923)
location: region:64804-64923:-1
so has part: feature:64804-64923:-1:exon
subclass of: SO_0000010

4929686
type: Gene
SIO_000068: ncbigene

position:64804:-1
position: 64804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64923:-1
position: 64923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64804-64923:-1:exon

Poptr_cp039
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: psbF
locus tag: Poptr_cp039
inference: similar to AA sequence:SP:PSBF_ARATH
note: cytochrome b559 beta chain 4 kDa subunit
codon start: 1
transl table: 11
product: photosystem II protein VI
translation: MTIDRTYPIFTVRWLAVHGLAVPTVSFLGSISAMQFIQR
SIO_010081: Poptr_cp039
subclass of: SO_0000673
so part of: Poptr_cp039
location: complement(64804..64923)
location: region:64804-64923:-1
so has part: feature:64804-64923:-1:exon

YP_001109518.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64804-64923:-1:exon

Poptr_cp040
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: psbE
locus tag: Poptr_cp040
so part of: sequence
location: complement(64938..65189)
location: region:64938-65189:-1
so has part: feature:64938-65189:-1:exon
subclass of: SO_0000010

4929687
type: Gene
SIO_000068: ncbigene

position:64938:-1
position: 64938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65189:-1
position: 65189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64938-65189:-1:exon

Poptr_cp040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: psbE
locus tag: Poptr_cp040
inference: similar to AA sequence:SP:PSBE_ARATH
note: cytochrome b559 alpha chain 8 kDa subunit
codon start: 1
transl table: 11
product: photosystem II protein V
translation: MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDPLEQLDEFSRSF
SIO_010081: Poptr_cp040
subclass of: SO_0000673
so part of: Poptr_cp040
location: complement(64938..65189)
location: region:64938-65189:-1
so has part: feature:64938-65189:-1:exon

YP_001109519.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64938-65189:-1:exon

Poptr_cp041
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: petL
locus tag: Poptr_cp041
so part of: sequence
location: 66367..66462
location: region:66367-66462:1
so has part: feature:66367-66462:1:exon
subclass of: SO_0000010

4929688
type: Gene
SIO_000068: ncbigene

position:66367:1
position: 66367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66462:1
position: 66462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66367-66462:1:exon

Poptr_cp041
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: petL
locus tag: Poptr_cp041
inference: similar to AA sequence:SP:PETL_ARATH
note: cytochrome b/f complex 3.5 kD subunit
codon start: 1
transl table: 11
product: cytochrome b6/f complex subunit VI
translation: MPTLTSYFGFLLVALTITLVLFISLSKIRLI
SIO_010081: Poptr_cp041
subclass of: SO_0000673
so part of: Poptr_cp041
location: 66367..66462
location: region:66367-66462:1
so has part: feature:66367-66462:1:exon

YP_001109520.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66367-66462:1:exon

Poptr_cp042
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: petG
locus tag: Poptr_cp042
so part of: sequence
location: 66644..66757
location: region:66644-66757:1
so has part: feature:66644-66757:1:exon
subclass of: SO_0000010

4929689
type: Gene
SIO_000068: ncbigene

position:66644:1
position: 66644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66757:1
position: 66757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66644-66757:1:exon

Poptr_cp042
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: petG
locus tag: Poptr_cp042
note: required for the either the stability or assembly of the cytochrome b6/f complex
codon start: 1
transl table: 11
product: cytochrome b6/f complex subunit V
translation: MIEVFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL
SIO_010081: Poptr_cp042
subclass of: SO_0000673
so part of: Poptr_cp042
location: 66644..66757
location: region:66644-66757:1
so has part: feature:66644-66757:1:exon

YP_001109521.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66644-66757:1:exon

Poptr_cpR021
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cpR021
so part of: sequence
location: complement(66876..66949)
location: region:66876-66949:-1
so has part: feature:66876-66949:-1:exon
subclass of: SO_0000663

4929690
type: Gene
SIO_000068: ncbigene

position:66876:-1
position: 66876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66949:-1
position: 66949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66876-66949:-1:exon

Poptr_cpR021
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3694
locus tag: Poptr_cpR021
product: tRNA-Trp
SIO_010081: Poptr_cpR021
subclass of: SO_0000673
so part of: Poptr_cpR021
location: complement(66876..66949)
location: region:66876-66949:-1
so has part: feature:66876-66949:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:66876-66949:-1:exon

Poptr_cpR022
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cpR022
so part of: sequence
location: complement(67177..67250)
location: region:67177-67250:-1
so has part: feature:67177-67250:-1:exon
subclass of: SO_0000663

4929691
type: Gene
SIO_000068: ncbigene

position:67177:-1
position: 67177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67250:-1
position: 67250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67177-67250:-1:exon

Poptr_cpR022
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3694
locus tag: Poptr_cpR022
product: tRNA-Pro
SIO_010081: Poptr_cpR022
subclass of: SO_0000673
so part of: Poptr_cpR022
location: complement(67177..67250)
location: region:67177-67250:-1
so has part: feature:67177-67250:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:67177-67250:-1:exon

Poptr_cp043
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: psaJ
locus tag: Poptr_cp043
so part of: sequence
location: 67669..67803
location: region:67669-67803:1
so has part: feature:67669-67803:1:exon
subclass of: SO_0000010

4929692
type: Gene
SIO_000068: ncbigene

position:67669:1
position: 67669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67803:1
position: 67803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67669-67803:1:exon

Poptr_cp043
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: psaJ
locus tag: Poptr_cp043
inference: similar to AA sequence:SP:PSAJ_ARATH
note: photosystem I J protein
codon start: 1
transl table: 11
product: photosystem I subunit IX
translation: MRDLKTYLSVAPVISTLWFGSLAGLLIEINRFFPDALTFPFFSF
SIO_010081: Poptr_cp043
subclass of: SO_0000673
so part of: Poptr_cp043
location: 67669..67803
location: region:67669-67803:1
so has part: feature:67669-67803:1:exon

YP_001109522.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67669-67803:1:exon

Poptr_cp044
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: rpl33
locus tag: Poptr_cp044
so part of: sequence
location: 68279..68479
location: region:68279-68479:1
so has part: feature:68279-68479:1:exon
subclass of: SO_0000010

4929693
type: Gene
SIO_000068: ncbigene

position:68279:1
position: 68279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68479:1
position: 68479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68279-68479:1:exon

Poptr_cp044
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: rpl33
locus tag: Poptr_cp044
note: Based on sequence match with tobacco
codon start: 1
transl table: 11
product: ribosomal protein L33
translation: MANGKDVRIRVILECTSCVRKSVNKKSIGISRYITQKNRHNRPSRLELRKFCPYCYKHTIHGEIKK
SIO_010081: Poptr_cp044
subclass of: SO_0000673
so part of: Poptr_cp044
location: 68279..68479
location: region:68279-68479:1
so has part: feature:68279-68479:1:exon

YP_001109523.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68279-68479:1:exon

Poptr_cp045
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: rps18
locus tag: Poptr_cp045
so part of: sequence
location: 68683..68988
location: region:68683-68988:1
so has part: feature:68683-68988:1:exon
subclass of: SO_0000010

4929694
type: Gene
SIO_000068: ncbigene

position:68683:1
position: 68683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68988:1
position: 68988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68683-68988:1:exon

Poptr_cp045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: rps18
locus tag: Poptr_cp045
inference: similar to AA sequence:SP:RR18_ARATH
codon start: 1
transl table: 11
product: ribosomal protein S18
translation: MDKSKRLFLKPKRSLRRRLPPIGSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSSLPFLNNERQFEKNELVARTTGLRTRKK
SIO_010081: Poptr_cp045
subclass of: SO_0000673
so part of: Poptr_cp045
location: 68683..68988
location: region:68683-68988:1
so has part: feature:68683-68988:1:exon

YP_001109524.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68683-68988:1:exon

Poptr_cp046
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: rpl20
locus tag: Poptr_cp046
so part of: sequence
location: complement(69284..69637)
location: region:69284-69637:-1
so has part: feature:69284-69637:-1:exon
subclass of: SO_0000010

4929695
type: Gene
SIO_000068: ncbigene

position:69284:-1
position: 69284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69637:-1
position: 69637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69284-69637:-1:exon

Poptr_cp046
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: rpl20
locus tag: Poptr_cp046
inference: similar to AA sequence:SP:RK20_ARATH
codon start: 1
transl table: 11
product: ribosomal protein L20
translation: MTRIRRGYIARRRRTKIRLFTSSFRGAHSRLTRTMIQQKIKALFSAYRDRDRHKRNFRCLWVTRINAAIRENGVSYSYSTLINNLYKRQLLLNRKILAQLAILNRNCLYLISNDMIK
SIO_010081: Poptr_cp046
subclass of: SO_0000673
so part of: Poptr_cp046
location: complement(69284..69637)
location: region:69284-69637:-1
so has part: feature:69284-69637:-1:exon

YP_001109525.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69284-69637:-1:exon

Poptr_cp091
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: rps12
locus tag: Poptr_cp091
trans splicing: true
so part of: sequence
location: join(complement(70463..70576),141924..142717)
location: region:70463-142717:1
so has part: feature:70463-70576:-1:exon
so has part: feature:141924-142717:1:exon
subclass of: SO_0000010

4929696
type: Gene
SIO_000068: ncbigene

position:70463:1
position: 70463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142717:-1
position: 142717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70463-70576:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:141924-142717:1:exon

position:141924:1
position: 141924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142717:1
position: 142717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Poptr_cp091
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: rps12
locus tag: Poptr_cp091
inference: similar to AA sequence:SP:NP_054910
trans splicing: true
codon start: 1
transl table: 11
product: ribosomal protein S12
translation: MPTIKQLIRNTRQPIRNVTKSPALGGCPQRRGTCTRVYTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRSQYGVKKPK
SIO_010081: Poptr_cp091
subclass of: SO_0000673
so part of: Poptr_cp091
location: join(complement(70463..70576),141924..142154,142691..142717)
location: region:70463-142717:1
so has part: feature:70463-70576:-1:exon
so has part: feature:141924-142154:1:exon
so has part: feature:142691-142717:1:exon

YP_001109526.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70463-70576:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:141924-142154:1:exon

position:142154:1
position: 142154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:142691-142717:1:exon

position:142691:1
position: 142691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Poptr_cp048
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: clpP
locus tag: Poptr_cp048
so part of: sequence
location: complement(70774..72808)
location: region:70774-72808:-1
so has part: feature:70774-72808:-1:exon
subclass of: SO_0000010

4929698
type: Gene
SIO_000068: ncbigene

position:70774:-1
position: 70774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72808:-1
position: 72808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70774-72808:-1:exon

Poptr_cp048
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: clpP
locus tag: Poptr_cp048
EC number: 3.4.21.92
inference: similar to AA sequence:SP:CLPP_ARATH
exception: nonconsensus splice site
codon start: 1
transl table: 11
product: ATP-dependent Clp protease proteolytic subunit
translation: MPIGVPKVPFRNPGEDSSNWIDVYNRLYRERLLFLGQDIDSEISNQLIGLMVYLSTESEIKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTVCMGLAASMGSFILVGGKITKRLAFPHARVMIHQPFAAFYEAQIGEFVLEAEELLKLREILTRVYAQRTGKPLWVVSEDMERDVFMSAAEAQVHGIVDLVAVA
SIO_010081: Poptr_cp048
subclass of: SO_0000673
so part of: Poptr_cp048
location: complement(join(70774..71001,71632..71923,72738..72808))
location: region:70774-72808:-1
so has part: feature:72738-72808:-1:exon
so has part: feature:71632-71923:-1:exon
so has part: feature:70774-71001:-1:exon

YP_001109527.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72738-72808:-1:exon

position:72738:-1
position: 72738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:71632-71923:-1:exon

position:71632:-1
position: 71632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71923:-1
position: 71923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:70774-71001:-1:exon

position:71001:-1
position: 71001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Poptr_cp049
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: psbB
locus tag: Poptr_cp049
so part of: sequence
location: 73334..74860
location: region:73334-74860:1
so has part: feature:73334-74860:1:exon
subclass of: SO_0000010

4929699
type: Gene
SIO_000068: ncbigene

position:73334:1
position: 73334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74860:1
position: 74860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73334-74860:1:exon

Poptr_cp049
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: psbB
locus tag: Poptr_cp049
inference: similar to AA sequence:SP:PSBB_ARATH
note: PSII 47 kDa protein
codon start: 1
transl table: 11
product: photosystem II 47 kDa protein
translation: MGLPWYRVHTVVLNDPGRLLAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGTGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAIGWLGHPLFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGSRTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTRRQVV
SIO_010081: Poptr_cp049
subclass of: SO_0000673
so part of: Poptr_cp049
location: 73334..74860
location: region:73334-74860:1
so has part: feature:73334-74860:1:exon

YP_001109528.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73334-74860:1:exon

Poptr_cp050
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: psbT
locus tag: Poptr_cp050
so part of: sequence
location: 75058..75165
location: region:75058-75165:1
so has part: feature:75058-75165:1:exon
subclass of: SO_0000010

4929700
type: Gene
SIO_000068: ncbigene

position:75058:1
position: 75058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75165:1
position: 75165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75058-75165:1:exon

Poptr_cp050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: psbT
locus tag: Poptr_cp050
inference: similar to AA sequence:SP:PSBT_ORYSA
note: photosystem II T protein
codon start: 1
transl table: 11
product: photosystem II protein T
translation: MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKKVK
SIO_010081: Poptr_cp050
subclass of: SO_0000673
so part of: Poptr_cp050
location: 75058..75165
location: region:75058-75165:1
so has part: feature:75058-75165:1:exon

YP_001109529.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75058-75165:1:exon

Poptr_cp051
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: psbN
locus tag: Poptr_cp051
so part of: sequence
location: complement(75226..75357)
location: region:75226-75357:-1
so has part: feature:75226-75357:-1:exon
subclass of: SO_0000010

4929701
type: Gene
SIO_000068: ncbigene

position:75226:-1
position: 75226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75357:-1
position: 75357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75226-75357:-1:exon

Poptr_cp051
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: psbN
locus tag: Poptr_cp051
inference: similar to AA sequence:SP:PSBN_ORYSA
note: photosystem II P protein
codon start: 1
transl table: 11
product: photosystem II protein N
translation: METATLVAISISGLLVSFTGYALYTAFGQPSQQLRDPFEEHGD
SIO_010081: Poptr_cp051
subclass of: SO_0000673
so part of: Poptr_cp051
location: complement(75226..75357)
location: region:75226-75357:-1
so has part: feature:75226-75357:-1:exon

YP_001109530.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75226-75357:-1:exon

Poptr_cp052
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: psbH
locus tag: Poptr_cp052
so part of: sequence
location: 75479..75700
location: region:75479-75700:1
so has part: feature:75479-75700:1:exon
subclass of: SO_0000010

4929702
type: Gene
SIO_000068: ncbigene

position:75479:1
position: 75479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75700:1
position: 75700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75479-75700:1:exon

Poptr_cp052
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: psbH
locus tag: Poptr_cp052
inference: similar to AA sequence:SP:PSBH_ARATH
note: photosystem II phosphoprotein
codon start: 1
transl table: 11
product: photosystem II protein H
translation: MATQSVEGSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSIILEIYNSSVLLDGISMN
SIO_010081: Poptr_cp052
subclass of: SO_0000673
so part of: Poptr_cp052
location: 75479..75700
location: region:75479-75700:1
so has part: feature:75479-75700:1:exon

YP_001109531.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75479-75700:1:exon

Poptr_cp053
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: petB
locus tag: Poptr_cp053
so part of: sequence
location: 75835..77292
location: region:75835-77292:1
so has part: feature:75835-77292:1:exon
subclass of: SO_0000010

4929703
type: Gene
SIO_000068: ncbigene

position:75835:1
position: 75835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77292:1
position: 77292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75835-77292:1:exon

Poptr_cp053
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: petB
locus tag: Poptr_cp053
inference: similar to AA sequence:SP:CYB6_MAIZE
exception: nonconsensus splice site
codon start: 1
transl table: 11
product: cytochrome b6
translation: MSKVYDWFEERLEIQTIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLGVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL
SIO_010081: Poptr_cp053
subclass of: SO_0000673
so part of: Poptr_cp053
location: join(75835..75840,76651..77292)
location: region:75835-77292:1
so has part: feature:75835-75840:1:exon
so has part: feature:76651-77292:1:exon

YP_001109532.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75835-75840:1:exon

position:75840:1
position: 75840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:76651-77292:1:exon

position:76651:1
position: 76651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Poptr_cp054
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: petD
locus tag: Poptr_cp054
so part of: sequence
location: 77519..78811
location: region:77519-78811:1
so has part: feature:77519-78811:1:exon
subclass of: SO_0000010

4929704
type: Gene
SIO_000068: ncbigene

position:77519:1
position: 77519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78811:1
position: 78811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77519-78811:1:exon

Poptr_cp054
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: petD
locus tag: Poptr_cp054
inference: similar to AA sequence:SP:PETD_MAIZE
exception: nonconsensus splice site
note: 17 kD polypeptide; cytochrome b/f complex subunit IV
codon start: 1
transl table: 11
product: cytochrome b6/f complex subunit IV
translation: MGVTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTVVALWLGIGATLPIDKSLTLGLFQIDSI
SIO_010081: Poptr_cp054
subclass of: SO_0000673
so part of: Poptr_cp054
location: join(77519..77527,78323..78811)
location: region:77519-78811:1
so has part: feature:77519-77527:1:exon
so has part: feature:78323-78811:1:exon

YP_001109533.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77519-77527:1:exon

position:77527:1
position: 77527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:78323-78811:1:exon

position:78323:1
position: 78323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Poptr_cp055
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: rpoA
locus tag: Poptr_cp055
so part of: sequence
location: complement(78948..79967)
location: region:78948-79967:-1
so has part: feature:78948-79967:-1:exon
subclass of: SO_0000010

4929705
type: Gene
SIO_000068: ncbigene

position:78948:-1
position: 78948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79967:-1
position: 79967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78948-79967:-1:exon

Poptr_cp055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: rpoA
locus tag: Poptr_cp055
EC number: 2.7.7.6
inference: similar to AA sequence:SP:RPOA_ARATH
codon start: 1
transl table: 11
product: RNA polymerase alpha subunit
translation: MVREKVRISTRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSKKIPHEFSTITGIQESIHEILMNLKEIVLRSNLYGTHDASICVKGPGCVTAQDIILPPSVEIIDNTQHIASLREPIDLHIGLEIERNRGYCMKPPKNFQDGSYSIDAVFMPVRNANHSVHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEENFHLEKNQHKITLPLFAFHDRLAKLRKNQKEIALKSIFIDQLELAPKIYNCLKRSNIHTLWDLLKNSQEDLMKIEHFRIEDVKHIFGILKIEKHFTINLPKNKF
SIO_010081: Poptr_cp055
subclass of: SO_0000673
so part of: Poptr_cp055
location: complement(78948..79967)
location: region:78948-79967:-1
so has part: feature:78948-79967:-1:exon

YP_001109534.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78948-79967:-1:exon

Poptr_cp056
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: rps11
locus tag: Poptr_cp056
so part of: sequence
location: complement(80038..80454)
location: region:80038-80454:-1
so has part: feature:80038-80454:-1:exon
subclass of: SO_0000010

4929706
type: Gene
SIO_000068: ncbigene

position:80038:-1
position: 80038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80454:-1
position: 80454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80038-80454:-1:exon

Poptr_cp056
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: rps11
locus tag: Poptr_cp056
inference: similar to AA sequence:SP:RR11_ARATH
codon start: 1
transl table: 11
product: ribosomal protein S11
translation: MAKLLPRIGSRKNGRISSRKNARKIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGACGFRGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRRV
SIO_010081: Poptr_cp056
subclass of: SO_0000673
so part of: Poptr_cp056
location: complement(80038..80454)
location: region:80038-80454:-1
so has part: feature:80038-80454:-1:exon

YP_001109535.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80038-80454:-1:exon

Poptr_cp057
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: rpl36
locus tag: Poptr_cp057
so part of: sequence
location: complement(80562..80675)
location: region:80562-80675:-1
so has part: feature:80562-80675:-1:exon
subclass of: SO_0000010

4929707
type: Gene
SIO_000068: ncbigene

position:80562:-1
position: 80562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80675:-1
position: 80675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80562-80675:-1:exon

Poptr_cp057
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: rpl36
locus tag: Poptr_cp057
note: identified by similarity to Nicotiana tabaccum
codon start: 1
transl table: 11
product: ribosomal protein L36
translation: MKIRASARKICEKCRLIRRRGRILIICSNPRHKQRQG
SIO_010081: Poptr_cp057
subclass of: SO_0000673
so part of: Poptr_cp057
location: complement(80562..80675)
location: region:80562-80675:-1
so has part: feature:80562-80675:-1:exon

YP_001109536.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80562-80675:-1:exon

Poptr_cpR046
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: infA
locus tag: Poptr_cpR046
note: similar to Spinacia oleracea initiation factor 1
pseudo: true
so part of: sequence
location: complement(80807..81043)
location: region:80807-81043:-1
so has part: feature:80807-81043:-1:exon

4929708
type: Gene
SIO_000068: ncbigene

position:80807:-1
position: 80807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81043:-1
position: 81043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80807-81043:-1:exon

Poptr_cp058
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: rps8
locus tag: Poptr_cp058
so part of: sequence
location: complement(81165..81569)
location: region:81165-81569:-1
so has part: feature:81165-81569:-1:exon
subclass of: SO_0000010

4929773
type: Gene
SIO_000068: ncbigene

position:81165:-1
position: 81165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81569:-1
position: 81569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81165-81569:-1:exon

Poptr_cp058
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: rps8
locus tag: Poptr_cp058
inference: similar to AA sequence:SP:RR8_ARATH
codon start: 1
transl table: 11
product: ribosomal protein S8
translation: MGRDTLADIITSIRNADMDRKGTVRIPSTNITENIIKILLREGFIENVRKHQEGNFFFFALTLRHRRNRKGPCRTSLNLKRISRPGLRIYSNYQQIPRILGGMGIVILSTSRGIMTDREARLERIGGEILCYIW
SIO_010081: Poptr_cp058
subclass of: SO_0000673
so part of: Poptr_cp058
location: complement(81165..81569)
location: region:81165-81569:-1
so has part: feature:81165-81569:-1:exon

YP_001109537.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81165-81569:-1:exon

Poptr_cp059
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: rpl14
locus tag: Poptr_cp059
so part of: sequence
location: complement(81813..82181)
location: region:81813-82181:-1
so has part: feature:81813-82181:-1:exon
subclass of: SO_0000010

4929709
type: Gene
SIO_000068: ncbigene

position:81813:-1
position: 81813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82181:-1
position: 82181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81813-82181:-1:exon

Poptr_cp059
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: rpl14
locus tag: Poptr_cp059
inference: similar to AA sequence:SP:RK14_ARATH
codon start: 1
transl table: 11
product: ribosomal protein L14
translation: MIQSQTHLNVADNSGARELMCIRIIGTSNRRYAHIGDIIIAVIKEAVPNSPLERSEVIRAVIVRTSKELKRDNGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELRQLNFTKIVSLAPEVL
SIO_010081: Poptr_cp059
subclass of: SO_0000673
so part of: Poptr_cp059
location: complement(81813..82181)
location: region:81813-82181:-1
so has part: feature:81813-82181:-1:exon

YP_001109538.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81813-82181:-1:exon

Poptr_cp060
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: rpl16
locus tag: Poptr_cp060
so part of: sequence
location: complement(82315..83837)
location: region:82315-83837:-1
so has part: feature:82315-83837:-1:exon
subclass of: SO_0000010

4929710
type: Gene
SIO_000068: ncbigene

position:82315:-1
position: 82315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83837:-1
position: 83837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82315-83837:-1:exon

Poptr_cp060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: rpl16
locus tag: Poptr_cp060
inference: similar to AA sequence:SP:RK16_ARATH
exception: nonconsensus splice site
codon start: 1
transl table: 11
product: ribosomal protein L16
translation: MLSPKRTRFRKQHRGRMKGISSRGNRICFGRYALQALEPAWITSRQIEAGRRAMTRNVRRGGKIWVRIFPDKPVTLRPSETRMGSGKGSPEYWVAVVKPGRMIYEMGGVAENIARKAISIAASKMPIRTQFIILR
SIO_010081: Poptr_cp060
subclass of: SO_0000673
so part of: Poptr_cp060
location: complement(join(82315..82713,83829..83837))
location: region:82315-83837:-1
so has part: feature:83829-83837:-1:exon
so has part: feature:82315-82713:-1:exon

YP_001109539.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83829-83837:-1:exon

position:83829:-1
position: 83829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:82315-82713:-1:exon

position:82713:-1
position: 82713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Poptr_cp061
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: rps3
locus tag: Poptr_cp061
so part of: sequence
location: complement(84026..84682)
location: region:84026-84682:-1
so has part: feature:84026-84682:-1:exon
subclass of: SO_0000010

4929711
type: Gene
SIO_000068: ncbigene

position:84026:-1
position: 84026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84682:-1
position: 84682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84026-84682:-1:exon

Poptr_cp061
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: rps3
locus tag: Poptr_cp061
inference: similar to AA sequence:SP:RR3_ARATH
codon start: 1
transl table: 11
product: ribosomal protein S3
translation: MGQKINPLGFRLGTTQDHYSLWFAQPKNFFEGLQEDQKIRNCIKNYVQKNMKISSGVEGIGHIEIQKRIDVIQVIIYLGFPKFLTEGKPKRIKELQINVQKELNCMNRKLNISITRIENPYMHPNVLAEFIAGQLKNRVSFRKAMKKAIELTEQSNTKGIQVQIAGRLDGKEIARAEWVREGRVPLQTLRAKINYCSYTVRTIYGVLGIKIWIFVDEE
SIO_010081: Poptr_cp061
subclass of: SO_0000673
so part of: Poptr_cp061
location: complement(84026..84682)
location: region:84026-84682:-1
so has part: feature:84026-84682:-1:exon

YP_001109540.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84026-84682:-1:exon

Poptr_cp062
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: rpl22
locus tag: Poptr_cp062
so part of: sequence
location: complement(84782..85180)
location: region:84782-85180:-1
so has part: feature:84782-85180:-1:exon
subclass of: SO_0000010

4929712
type: Gene
SIO_000068: ncbigene

position:84782:-1
position: 84782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85180:-1
position: 85180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84782-85180:-1:exon

Poptr_cp062
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: rpl22
locus tag: Poptr_cp062
inference: similar to RNA sequence, EST:INSD:BI128480.1
codon start: 1
transl table: 11
product: ribosomal protein L22
translation: MIKKRKKNPYEASASGFYISMSAHKARRIIDQIRGRSYEETLMILELMPYRACYPIFKLVYSAAANASHNMGLNEASLVISKAEVNEGATMKKFKPRARGRSYLIKRQTCHISIVLEDISYEEYEEDFLRRI
SIO_010081: Poptr_cp062
subclass of: SO_0000673
so part of: Poptr_cp062
location: complement(84782..85180)
location: region:84782-85180:-1
so has part: feature:84782-85180:-1:exon

YP_001109541.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84782-85180:-1:exon

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 3694
note: inverted repeat B
rpt type: inverted
so part of: sequence
location: 85130..112781
location: region:85130-112781:1
so has part: feature:85130-112781:1:region

position:85130:1
position: 85130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112781:1
position: 112781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85130-112781:1:region

Poptr_cp063
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: rps19
locus tag: Poptr_cp063
so part of: sequence
location: complement(85349..85627)
location: region:85349-85627:-1
so has part: feature:85349-85627:-1:exon
subclass of: SO_0000010

4929713
type: Gene
SIO_000068: ncbigene

position:85349:-1
position: 85349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85627:-1
position: 85627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85349-85627:-1:exon

Poptr_cp063
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: rps19
locus tag: Poptr_cp063
codon start: 1
transl table: 11
product: ribosomal protein S19
translation: MTRSLKKNPFVANHLLRKINKLNTKAEKNLIVTWSRASTIIPTMIGHTIAIHNGKEHLPIYITDRMVGHKLGEFAPTLNFRGHAKNDNKSRR
SIO_010081: Poptr_cp063
subclass of: SO_0000673
so part of: Poptr_cp063
location: complement(85349..85627)
location: region:85349-85627:-1
so has part: feature:85349-85627:-1:exon

YP_001109542.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:85349-85627:-1:exon

Poptr_cp064
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: rpl2
locus tag: Poptr_cp064
so part of: sequence
location: complement(85689..87181)
location: region:85689-87181:-1
so has part: feature:85689-87181:-1:exon
subclass of: SO_0000010

4929714
type: Gene
SIO_000068: ncbigene

position:85689:-1
position: 85689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87181:-1
position: 87181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85689-87181:-1:exon

Poptr_cp064
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: rpl2
locus tag: Poptr_cp064
exception: nonconsensus splice site
codon start: 1
transl table: 11
product: ribosomal protein L2
translation: MAIHLYKTSTPSTRNGAVDSQVKSNTRNNLIYGQHRCGKGRNSRGIITARHRGGGHKRLYRKIDFRRNEKYIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIISGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
SIO_010081: Poptr_cp064
subclass of: SO_0000673
so part of: Poptr_cp064
location: complement(join(85689..86123,86792..87181))
location: region:85689-87181:-1
so has part: feature:86792-87181:-1:exon
so has part: feature:85689-86123:-1:exon

YP_001109543.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:86792-87181:-1:exon

position:86792:-1
position: 86792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:85689-86123:-1:exon

position:86123:-1
position: 86123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Poptr_cp065
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: rpl23
locus tag: Poptr_cp065
so part of: sequence
location: complement(87200..87481)
location: region:87200-87481:-1
so has part: feature:87200-87481:-1:exon
subclass of: SO_0000010

4929715
type: Gene
SIO_000068: ncbigene

position:87200:-1
position: 87200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87481:-1
position: 87481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87200-87481:-1:exon

Poptr_cp065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: rpl23
locus tag: Poptr_cp065
note: 60S ribosomal protein L23
codon start: 1
transl table: 11
product: ribosomal protein L23
translation: MDGIKYAVVTDKSIRLLLKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHRLPGKGRRMRPIMGHTMHYRRMIITLQPGYSIPPLRKKRT
SIO_010081: Poptr_cp065
subclass of: SO_0000673
so part of: Poptr_cp065
location: complement(87200..87481)
location: region:87200-87481:-1
so has part: feature:87200-87481:-1:exon

YP_001109544.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87200-87481:-1:exon

Poptr_cpR023
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: trnI-CAU
locus tag: Poptr_cpR023
so part of: sequence
location: complement(87647..87720)
location: region:87647-87720:-1
so has part: feature:87647-87720:-1:exon
subclass of: SO_0000663

4929716
type: Gene
SIO_000068: ncbigene

position:87647:-1
position: 87647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87720:-1
position: 87720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87647-87720:-1:exon

Poptr_cpR023
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3694
gene: trnI-CAU
locus tag: Poptr_cpR023
product: tRNA-Ile
SIO_010081: Poptr_cpR023
subclass of: SO_0000673
so part of: Poptr_cpR023
location: complement(87647..87720)
location: region:87647-87720:-1
so has part: feature:87647-87720:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:87647-87720:-1:exon

Poptr_cp066
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: ycf2
locus tag: Poptr_cp066
so part of: sequence
location: 87815..94672
location: region:87815-94672:1
so has part: feature:87815-94672:1:exon
subclass of: SO_0000010

4929717
type: Gene
SIO_000068: ncbigene

position:87815:1
position: 87815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94672:1
position: 94672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87815-94672:1:exon

Poptr_cp066
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: ycf2
locus tag: Poptr_cp066
note: hypothetical protein RF2
codon start: 1
transl table: 11
product: Ycf2
translation: MKGHQFKSWIFELREILREIKNSHYFLDSWTQFNSVGSFIHIFFHQERFIKLLDSRIWSILFSRNSQGSTSNRYFTIKGVVLFVVVVLIYRINNRKMVERKNLYLTGLLPIPMNSIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESRFLDPKESTWVLPITKKCIMSESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDIKYLEFLFVYYMDDPIRKDHDWELFDRLSPRKGRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSRKKWAISLQNCAQFHMWQFRQDLFVSWGNNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKARNISSNIQYDSTRSSFVQGRDSSQLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCLSGYSSMSRLFTEGAKEMNNHLLPEEIEEFLGNPTRSIRSFFSDRWSELHLGSNPTERSTRDQKLLKKEQDVSFVPSRRSENKEIVNIFKTITYLQNTVSIHPISSDPGCDMVLKDELDMDSSNKISFLNKNPFFDLFHLFHDRNGGGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFFIDSYGLDQKQFLNEVFNSRDESKKKSLLVLPPIFYEENESFYRRIRKKWVRISCGNDLEDPKQKRVVFASNNIMEAVNQYGLIRNLIQIQYSTYGYIRNVLNQFFLMNRSDRNFEYGIQKDQIGNDTLNHRTLMKYTINQHLSNLKQSQKKWFDPLIFLSRTERSMNWDPNSYRYKWSNGSNNFQEHLEHFISEQKSRFLFQVVFDRLRINQYSIDWSEVIDKKDLSKSLPFFLSKLLLFLSKFLLFLSNSLPFFFVSFGNIPIHRSEIHIYELKGPNDQLCNQLLEPIGLQIVHLKKWKPFLLDDHDTSQKSKFLINGGTISPFLFNKIPKWMIDSFHTRNNRRKSFDNTDSSFSMISHDQDNWLNPVKPFHRSSLISSFYKANRLRFLNNLHHFCFYCNKRFPFYVEKARIKNYDFTYGQFLNILFIRNKIFSLCGGKKKHAFLERDTISPIESQVSNIFIPNDFPQSGDESLYKSFHFPIRPDPFVRRAIYSIADVSGTPLTEGQIFNFERTYCQPLSDINLSDSEGKNLHQYLNFNSNMGLIHTPCSEKYLPSEKRKKRSLCLKKCVEKGQMYRTFQRDSAFSTLSKWNLFQTYMPWFLTSTGYKYLNLIFLDTFSDHLLPILSSSQKIVSIFHDIMHGSDISWRILQKNLWKTQWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTRLRSPNVREFLYSILFLLLVAGYLVRTHLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDLLEEIRGSASGGNMLWGGGPAYGVKSIRSKKKFFNINLIDLISIIPNPINRITFSRNTRHLSHTSKEIYSLIRKRKNVNGDWIDDKIESLVANSDSIDDKEREFLVQFSTLTTEKRIDQILLSLTHSDHLSKNDSGYQMIEEPGAIYLRYLVDIHKKYLMNYEFNTPCLAERRIFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFLNKFLDNKPKGFLIDDRDDIDDSDDIDVSDDIDRDLDTELELLTRMNVLTMDMMPEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQRKHVFTLSYSRGFHLEKKMFHTKRFGSVTMGSNVRDLVALTNEALSISITQKKSIIDTNIIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVFLSNCPIDPISIYMKKKSCNEGDSYLYKWYFELGTSMKKLTILLYLLSCSAGSIAQDLWSLPGPDEKNGITYYGLVENDSDLVHGLLEVE…
SIO_010081: Poptr_cp066
subclass of: SO_0000673
so part of: Poptr_cp066
location: 87815..94672
location: region:87815-94672:1
so has part: feature:87815-94672:1:exon

YP_001109545.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87815-94672:1:exon

Poptr_cpR024
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cpR024
so part of: sequence
location: complement(95714..95794)
location: region:95714-95794:-1
so has part: feature:95714-95794:-1:exon
subclass of: SO_0000663

4929719
type: Gene
SIO_000068: ncbigene

position:95714:-1
position: 95714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95794:-1
position: 95794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95714-95794:-1:exon

Poptr_cpR024
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3694
locus tag: Poptr_cpR024
product: tRNA-Leu
SIO_010081: Poptr_cpR024
subclass of: SO_0000673
so part of: Poptr_cpR024
location: complement(95714..95794)
location: region:95714-95794:-1
so has part: feature:95714-95794:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:95714-95794:-1:exon

Poptr_cp068
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cp068
so part of: sequence
location: 95847..96032
location: region:95847-96032:1
so has part: feature:95847-96032:1:exon
subclass of: SO_0000010

4929720
type: Gene
SIO_000068: ncbigene

position:95847:1
position: 95847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96032:1
position: 96032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95847-96032:1:exon

Poptr_cp068
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
locus tag: Poptr_cp068
note: similar to Nicotiana tabacum orf 79
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEYMTKVECWSISIDRSCHIGPSQTSNCFDLNYPEDALSILYQKNGQSNLFLDSIEAKRGE
SIO_010081: Poptr_cp068
subclass of: SO_0000673
so part of: Poptr_cp068
location: 95847..96032
location: region:95847-96032:1
so has part: feature:95847-96032:1:exon

YP_001109547.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95847-96032:1:exon

Poptr_cp069
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: ndhB
locus tag: Poptr_cp069
so part of: sequence
location: complement(96374..98588)
location: region:96374-98588:-1
so has part: feature:96374-98588:-1:exon
subclass of: SO_0000010

4929721
type: Gene
SIO_000068: ncbigene

position:96374:-1
position: 96374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98588:-1
position: 98588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96374-98588:-1:exon

Poptr_cp069
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: ndhB
locus tag: Poptr_cp069
EC number: 7.1.1.2
inference: similar to AA sequence:SP:NU2C_MAIZE
exception: nonconsensus splice site
codon start: 1
transl table: 11
product: NADH dehydrogenase subunit 2
translation: MIWHVQNENFILDSTRIFMKAFHLLLFDGSFIFPECILIFGLILLLMIDSTSDQKDMPWLYFISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSPAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASASATRIFDIPFYFSSNEWHLLLEILAILSMIVGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMNLGTFACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFLVSIGLLTSVLSIYYYLKIIKLLMTGQNQEITPHVRNYRGSPLRSNNSIELSMIVCVIASTIPGISMSPIIEIAQDTLF
SIO_010081: Poptr_cp069
subclass of: SO_0000673
so part of: Poptr_cp069
location: complement(join(96374..97129,97812..98588))
location: region:96374-98588:-1
so has part: feature:97812-98588:-1:exon
so has part: feature:96374-97129:-1:exon

YP_001109548.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97812-98588:-1:exon

position:97812:-1
position: 97812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:96374-97129:-1:exon

position:97129:-1
position: 97129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Poptr_cp070
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: rps7
locus tag: Poptr_cp070
so part of: sequence
location: complement(98920..99387)
location: region:98920-99387:-1
so has part: feature:98920-99387:-1:exon
subclass of: SO_0000010

4929722
type: Gene
SIO_000068: ncbigene

position:98920:-1
position: 98920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99387:-1
position: 99387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98920-99387:-1:exon

Poptr_cp070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: rps7
locus tag: Poptr_cp070
codon start: 1
transl table: 11
product: ribosomal protein S7
translation: MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQILYRAMKKIQQKTETNPLSVLHQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMVFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
SIO_010081: Poptr_cp070
subclass of: SO_0000673
so part of: Poptr_cp070
location: complement(98920..99387)
location: region:98920-99387:-1
so has part: feature:98920-99387:-1:exon

YP_001109549.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:98920-99387:-1:exon

Poptr_cp072
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cp072
so part of: sequence
location: complement(99595..99792)
location: region:99595-99792:-1
so has part: feature:99595-99792:-1:exon
subclass of: SO_0000010

4929723
type: Gene
SIO_000068: ncbigene

position:99595:-1
position: 99595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99792:-1
position: 99792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99595-99792:-1:exon

Poptr_cp072
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
locus tag: Poptr_cp072
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTLSVSTNNSKCLDFFRAGPSQIAMIRSTSFYTISETQGLNRMDMENTGFPILAGKGGKRILNLK
SIO_010081: Poptr_cp072
subclass of: SO_0000673
so part of: Poptr_cp072
location: complement(99595..99792)
location: region:99595-99792:-1
so has part: feature:99595-99792:-1:exon

YP_001109550.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:99595-99792:-1:exon

Poptr_cp073
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cp073
so part of: sequence
location: 101487..101768
location: region:101487-101768:1
so has part: feature:101487-101768:1:exon
subclass of: SO_0000010

4929724
type: Gene
SIO_000068: ncbigene

position:101487:1
position: 101487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101768:1
position: 101768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101487-101768:1:exon

Poptr_cp073
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
locus tag: Poptr_cp073
exception: nonconsensus splice site
note: similar to orf70b in Nicotiana tabacum
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKFINEVVNGGVTIILFVVMNLVCVPKKRNLSIFRGLKGAWKHIRTLEWKWKRDVTPVPSEMVRSLAQEEGVDPYHLDLVLISLFF
SIO_010081: Poptr_cp073
subclass of: SO_0000673
so part of: Poptr_cp073
location: join(101487..101513,101535..101768)
location: region:101487-101768:1
so has part: feature:101487-101513:1:exon
so has part: feature:101535-101768:1:exon

YP_001109551.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:101487-101513:1:exon

position:101513:1
position: 101513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:101535-101768:1:exon

position:101535:1
position: 101535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Poptr_cpR025
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cpR025
so part of: sequence
location: 102100..102171
location: region:102100-102171:1
so has part: feature:102100-102171:1:exon
subclass of: SO_0000663

4929725
type: Gene
SIO_000068: ncbigene

position:102100:1
position: 102100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102171:1
position: 102171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102100-102171:1:exon

Poptr_cpR025
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3694
locus tag: Poptr_cpR025
product: tRNA-Val
SIO_010081: Poptr_cpR025
subclass of: SO_0000673
so part of: Poptr_cpR025
location: 102100..102171
location: region:102100-102171:1
so has part: feature:102100-102171:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:102100-102171:1:exon

Poptr_cpR026
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cpR026
so part of: sequence
location: 102397..103887
location: region:102397-103887:1
so has part: feature:102397-103887:1:exon
subclass of: SO_0000573

4929726
type: Gene
SIO_000068: ncbigene

position:102397:1
position: 102397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103887:1
position: 103887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102397-103887:1:exon

Poptr_cpR026
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 3694
locus tag: Poptr_cpR026
product: 16S ribosomal RNA
SIO_010081: Poptr_cpR026
subclass of: SO_0000673
so part of: Poptr_cpR026
location: 102397..103887
location: region:102397-103887:1
so has part: feature:102397-103887:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:102397-103887:1:exon

Poptr_cpR027
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cpR027
so part of: sequence
location: 104183..105202
location: region:104183-105202:1
so has part: feature:104183-105202:1:exon
subclass of: SO_0000663

4929727
type: Gene
SIO_000068: ncbigene

position:104183:1
position: 104183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105202:1
position: 105202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104183-105202:1:exon

Poptr_cpR027
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3694
locus tag: Poptr_cpR027
product: tRNA-Ile
SIO_010081: Poptr_cpR027
subclass of: SO_0000673
so part of: Poptr_cpR027
location: join(104183..104219,105168..105202)
location: region:104183-105202:1
so has part: feature:104183-104219:1:exon
so has part: feature:105168-105202:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:104183-104219:1:exon

position:104219:1
position: 104219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:105168-105202:1:exon

position:105168:1
position: 105168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Poptr_cp074
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cp074
so part of: sequence
location: 104907..105122
location: region:104907-105122:1
so has part: feature:104907-105122:1:exon
subclass of: SO_0000010

4929728
type: Gene
SIO_000068: ncbigene

position:104907:1
position: 104907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105122:1
position: 105122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104907-105122:1:exon

Poptr_cp074
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
locus tag: Poptr_cp074
note: similar to orf72 of Spinacia oleracea
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGAGLKKDLRVSKVGPGGSLNAFFFLLIGVISKRLAMVRKKGGTSTLGERSTPESCMLRSGRMNRSRKGIY
SIO_010081: Poptr_cp074
subclass of: SO_0000673
so part of: Poptr_cp074
location: 104907..105122
location: region:104907-105122:1
so has part: feature:104907-105122:1:exon

YP_001109552.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:104907-105122:1:exon

Poptr_cpR028
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: trnA
locus tag: Poptr_cpR028
so part of: sequence
location: 105272..106146
location: region:105272-106146:1
so has part: feature:105272-106146:1:exon
subclass of: SO_0000663

4929729
type: Gene
SIO_000068: ncbigene

position:105272:1
position: 105272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106146:1
position: 106146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105272-106146:1:exon

Poptr_cpR028
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3694
gene: trnA
locus tag: Poptr_cpR028
product: tRNA-Ala
SIO_010081: Poptr_cpR028
subclass of: SO_0000673
so part of: Poptr_cpR028
location: join(105272..105309,106112..106146)
location: region:105272-106146:1
so has part: feature:105272-105309:1:exon
so has part: feature:106112-106146:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:105272-105309:1:exon

position:105309:1
position: 105309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:106112-106146:1:exon

position:106112:1
position: 106112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Poptr_cpR029
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cpR029
so part of: sequence
location: 106299..109107
location: region:106299-109107:1
so has part: feature:106299-109107:1:exon
subclass of: SO_0000573

4929730
type: Gene
SIO_000068: ncbigene

position:106299:1
position: 106299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109107:1
position: 109107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106299-109107:1:exon

Poptr_cpR029
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 3694
locus tag: Poptr_cpR029
product: 23S ribosomal RNA
SIO_010081: Poptr_cpR029
subclass of: SO_0000673
so part of: Poptr_cpR029
location: 106299..109107
location: region:106299-109107:1
so has part: feature:106299-109107:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:106299-109107:1:exon

Poptr_cpR030
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cpR030
so part of: sequence
location: 109206..109308
location: region:109206-109308:1
so has part: feature:109206-109308:1:exon
subclass of: SO_0000573

4929731
type: Gene
SIO_000068: ncbigene

position:109206:1
position: 109206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109308:1
position: 109308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109206-109308:1:exon

Poptr_cpR030
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 3694
locus tag: Poptr_cpR030
product: 4.5S ribosomal RNA
SIO_010081: Poptr_cpR030
subclass of: SO_0000673
so part of: Poptr_cpR030
location: 109206..109308
location: region:109206-109308:1
so has part: feature:109206-109308:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:109206-109308:1:exon

Poptr_cp075
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cp075
so part of: sequence
location: complement(109316..109576)
location: region:109316-109576:-1
so has part: feature:109316-109576:-1:exon
subclass of: SO_0000010

4929732
type: Gene
SIO_000068: ncbigene

position:109316:-1
position: 109316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109576:-1
position: 109576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109316-109576:-1:exon

Poptr_cp075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
locus tag: Poptr_cp075
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDWCGSSTPRTPEYRTMNEERHERKAYWLVIVRPQFLTGGDTKGLCPSITWIDREGGRSFWFFFHVVKELNNKNRWRVPDRIDRVM
SIO_010081: Poptr_cp075
subclass of: SO_0000673
so part of: Poptr_cp075
location: complement(109316..109576)
location: region:109316-109576:-1
so has part: feature:109316-109576:-1:exon

YP_001109553.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:109316-109576:-1:exon

Poptr_cpR031
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cpR031
so part of: sequence
location: 109536..109656
location: region:109536-109656:1
so has part: feature:109536-109656:1:exon
subclass of: SO_0000573

4929733
type: Gene
SIO_000068: ncbigene

position:109536:1
position: 109536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109656:1
position: 109656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109536-109656:1:exon

Poptr_cpR031
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 3694
locus tag: Poptr_cpR031
product: 5S ribosomal RNA
SIO_010081: Poptr_cpR031
subclass of: SO_0000673
so part of: Poptr_cpR031
location: 109536..109656
location: region:109536-109656:1
so has part: feature:109536-109656:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:109536-109656:1:exon

Poptr_cpR032
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cpR032
so part of: sequence
location: 109903..109976
location: region:109903-109976:1
so has part: feature:109903-109976:1:exon
subclass of: SO_0000663

4929734
type: Gene
SIO_000068: ncbigene

position:109903:1
position: 109903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109976:1
position: 109976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109903-109976:1:exon

Poptr_cpR032
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3694
locus tag: Poptr_cpR032
product: tRNA-Arg
SIO_010081: Poptr_cpR032
subclass of: SO_0000673
so part of: Poptr_cpR032
location: 109903..109976
location: region:109903-109976:1
so has part: feature:109903-109976:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:109903-109976:1:exon

Poptr_cpR033
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cpR033
so part of: sequence
location: complement(110668..110739)
location: region:110668-110739:-1
so has part: feature:110668-110739:-1:exon
subclass of: SO_0000663

4929735
type: Gene
SIO_000068: ncbigene

position:110668:-1
position: 110668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110739:-1
position: 110739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110668-110739:-1:exon

Poptr_cpR033
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3694
locus tag: Poptr_cpR033
product: tRNA-Asn
SIO_010081: Poptr_cpR033
subclass of: SO_0000673
so part of: Poptr_cpR033
location: complement(110668..110739)
location: region:110668-110739:-1
so has part: feature:110668-110739:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:110668-110739:-1:exon

Poptr_cp076
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cp076
so part of: sequence
location: 111075..112880
location: region:111075-112880:1
so has part: feature:111075-112880:1:exon
subclass of: SO_0000010

4929736
type: Gene
SIO_000068: ncbigene

position:111075:1
position: 111075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112880:1
position: 112880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111075-112880:1:exon

Poptr_cp076
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
locus tag: Poptr_cp076
inference: similar to AA sequence:SP:YCF1_ARATH
codon start: 1
transl table: 11
product: hypothetical protein
translation: MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSMGPSYLFLLRARVIEEGEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLILVWIQQNNSLRSNKYIRSNKYLVSELRNSMARIFSILLFITCVYSLGRIPSPIFTKKLKETSETEEREEETDVEIETTPETKGTKQEQEGSTEEDPSSSLFSEEKENPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNRPVYETFYLDGNQENSKLEIFLDKKDKDLVWFEKPRVTILFDYKRWNRPFRYIKNDQFKNAVRKEMSQYFFSTCRSDGKERISFTYPPSLSTFLEMIQRKMSLFTTEKLSSDELYNHWNYNNEQKKKNLSNEFINRVEVLDKGFRVLNILEKKTRLCNDETKKEYLPKIYDPFLSGLYRGKVNFFFSPSIINEISIKNYIEMLWINKIYLILLISNYQEFEPKMEDRIRILKFLFDAIATKMGYFLNLINEFVTKSSFNLKRLFPIVIEK
SIO_010081: Poptr_cp076
subclass of: SO_0000673
so part of: Poptr_cp076
location: 111075..112880
location: region:111075-112880:1
so has part: feature:111075-112880:1:exon

YP_001109554.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111075-112880:1:exon

Poptr_cp077
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: ndhF
locus tag: Poptr_cp077
so part of: sequence
location: complement(112891..115173)
location: region:112891-115173:-1
so has part: feature:112891-115173:-1:exon
subclass of: SO_0000010

4929737
type: Gene
SIO_000068: ncbigene

position:112891:-1
position: 112891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115173:-1
position: 115173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112891-115173:-1:exon

Poptr_cp077
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: ndhF
locus tag: Poptr_cp077
codon start: 1
transl table: 11
product: NADH dehydrogenase subunit 5
translation: MEHTYQYLWIISFVTLPVPMLIGMGLLLFPVSTKKLHRIWAFPSVLLLSIVMVFSIDLFIQQINSSSIYQYVWSWTINNDFSLEFGYLIDPLTSILLILITTVGILVLVYSDSYMSHDQGYLRFFVYMSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIVSNACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIFNNLIYNNDNEVHFLFVTLCAFLLFSGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFVVIPYIMKLIALIGIITVLLGATLAFAQKDIKRGLAYSTMSQLGYTMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEVIVGYSPDKSQNMVLMGGLTKHVPITKIAFLLGTLSLCGIPPLACFWSKDEILNDSWSYSPIFAIIAFSTAGLTAFYMFRVYLLTFEGHLNIYFQNYSGKKNSAFYSISLWGKQGSKILKKKMRLLPLLTINNKNNNERASFFCFFWKKIYQTGGTVRKMTCPFITINHFGTKRIFSYPQESDNTILFPMLVLVLFTLFIGAIGIPFNQFNQEEMNFDILSKLLIPSLSLLHQNQNKSVDWYEFVTNSTFSVSIASFGIFIASSLYKPIYSSLQNLKFLNLVAKKGPKRILRDKIINVIYDWSYNRGYIDVFYAISLTEGIRRLAELTSFFDRRVIDGITNGVGFTSFFAGEGIKYVGGGRISFYLLLYLFYVLIFLLISSSIFSSFSSL
SIO_010081: Poptr_cp077
subclass of: SO_0000673
so part of: Poptr_cp077
location: complement(112891..115173)
location: region:112891-115173:-1
so has part: feature:112891-115173:-1:exon

YP_001109555.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:112891-115173:-1:exon

Poptr_cpR034
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cpR034
so part of: sequence
location: 115744..115823
location: region:115744-115823:1
so has part: feature:115744-115823:1:exon
subclass of: SO_0000663

4929738
type: Gene
SIO_000068: ncbigene

position:115744:1
position: 115744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115823:1
position: 115823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115744-115823:1:exon

Poptr_cpR034
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3694
locus tag: Poptr_cpR034
product: tRNA-Leu
SIO_010081: Poptr_cpR034
subclass of: SO_0000673
so part of: Poptr_cpR034
location: 115744..115823
location: region:115744-115823:1
so has part: feature:115744-115823:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:115744-115823:1:exon

Poptr_cp078
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: ccsA
locus tag: Poptr_cp078
so part of: sequence
location: 115946..116911
location: region:115946-116911:1
so has part: feature:115946-116911:1:exon
subclass of: SO_0000010

4929739
type: Gene
SIO_000068: ncbigene

position:115946:1
position: 115946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116911:1
position: 116911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115946-116911:1:exon

Poptr_cp078
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: ccsA
locus tag: Poptr_cp078
inference: similar to AA sequence:SP:CCSA_ARATH
note: CcsA; ccsA heme attachment to plastid cyt c
codon start: 1
transl table: 11
product: cytochrome c biogenesis protein
translation: MIFLTLEHILTHISFSVVSIVIIIHFLTLLVNEFVGLYDSSEKGMLTTFFCLTGLLITRWIYSGHLPISDLYESLIFLSWIFSIIHMVPYFKKHKNYLSTITAPSTFFTQGFATWGLLTDMHQSKILVPALQSQWLIMHVSMMVSGYAALLCGSLLSAALLVITFRKVIRIVGKNNNLLNDSFPVDEIQYMMEKKSILKNTFFPSSRNYYRFQLIQQLDHWGFRILSIGFLFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYFHTRTNKNLEGLNSAIVASIGFLIIWICYFGVNLLGIGLHSYGSFTLISN
SIO_010081: Poptr_cp078
subclass of: SO_0000673
so part of: Poptr_cp078
location: 115946..116911
location: region:115946-116911:1
so has part: feature:115946-116911:1:exon

YP_001109556.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:115946-116911:1:exon

Poptr_cp079
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: ndhD
locus tag: Poptr_cp079
so part of: sequence
location: complement(117167..118669)
location: region:117167-118669:-1
so has part: feature:117167-118669:-1:exon
subclass of: SO_0000010

4929740
type: Gene
SIO_000068: ncbigene

position:117167:-1
position: 117167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118669:-1
position: 118669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117167-118669:-1:exon

Poptr_cp079
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: ndhD
locus tag: Poptr_cp079
EC number: 7.1.1.2
inference: similar to AA sequence:SP:NU4C_ARATH
exception: RNA editing
codon start: 1
transl table: 11
product: NADH dehydrogenase subunit 4
translation: MNSFPWLTIFVGLPISAGFLIFVFPHRGNKVIRWYTIFICVLELLLMTYAFSYYFQLDDPLIQLTESYKWINFFDFYWRLGIDGLSLGPILLTGFITTLATLAARPITRDSRLFHFLMLAMYSGQIGLFSSQNLLLFFIMWELELIPVYLLLAMWGGKQRLYSATKFILYTAGSSVFLLMGALGIAFYASNEPTFNFETSANQSYPVTLEILFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLSHAHSIFSSWLIIVGAIQIIYAASTSSGQKNLKKRIAYSSVSHMGFTIIGICSISDMGLNGAILQIISHGFIGAALFFLSGTSYDRIRLVYLDEMGGMATLMPKIFMMFSILSLASLALPGMSGFFAELVVFFGIITAKKYFLMPKILITFVTAVGTILTPIYLLSMLRQMFYGYKLFNARNSYFFDSGPRELFVSIAILLPVISIGIYPDFVFSLSVDKVEAILSNYFYS
SIO_010081: Poptr_cp079
subclass of: SO_0000673
so part of: Poptr_cp079
location: complement(117167..118669)
location: region:117167-118669:-1
so has part: feature:117167-118669:-1:exon

YP_001109557.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:117167-118669:-1:exon

Poptr_cp080
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: psaC
locus tag: Poptr_cp080
so part of: sequence
location: complement(118816..119061)
location: region:118816-119061:-1
so has part: feature:118816-119061:-1:exon
subclass of: SO_0000010

4929741
type: Gene
SIO_000068: ncbigene

position:118816:-1
position: 118816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119061:-1
position: 119061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118816-119061:-1:exon

Poptr_cp080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: psaC
locus tag: Poptr_cp080
inference: similar to AA sequence:SP:PSAC_ARATH
note: 9 kDa protein
codon start: 1
transl table: 11
product: photosystem I subunit VII
translation: MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWDGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
SIO_010081: Poptr_cp080
subclass of: SO_0000673
so part of: Poptr_cp080
location: complement(118816..119061)
location: region:118816-119061:-1
so has part: feature:118816-119061:-1:exon

YP_001109558.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:118816-119061:-1:exon

Poptr_cp081
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: ndhE
locus tag: Poptr_cp081
so part of: sequence
location: complement(119305..119610)
location: region:119305-119610:-1
so has part: feature:119305-119610:-1:exon
subclass of: SO_0000010

4929742
type: Gene
SIO_000068: ncbigene

position:119305:-1
position: 119305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119610:-1
position: 119610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119305-119610:-1:exon

Poptr_cp081
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: ndhE
locus tag: Poptr_cp081
EC number: 7.1.1.2
inference: similar to AA sequence:SP:NULC_ARATH
codon start: 1
transl table: 11
product: NADH dehydrogenase subunit 4L
translation: MMLEYVLGLSAYLFSIGIYGLITSRNMVRALMCLELILNAVNINFVTFSDFFDSRQLKGNIFSIFVISIAAAEAAIGPAIVSSIYRNRKSIRINQLNLLNK
SIO_010081: Poptr_cp081
subclass of: SO_0000673
so part of: Poptr_cp081
location: complement(119305..119610)
location: region:119305-119610:-1
so has part: feature:119305-119610:-1:exon

YP_001109559.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:119305-119610:-1:exon

Poptr_cp082
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: ndhG
locus tag: Poptr_cp082
so part of: sequence
location: complement(119838..120368)
location: region:119838-120368:-1
so has part: feature:119838-120368:-1:exon
subclass of: SO_0000010

4929743
type: Gene
SIO_000068: ncbigene

position:119838:-1
position: 119838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120368:-1
position: 120368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119838-120368:-1:exon

Poptr_cp082
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: ndhG
locus tag: Poptr_cp082
EC number: 7.1.1.2
inference: similar to AA sequence:SP:NU6C_ARATH
codon start: 1
transl table: 11
product: NADH dehydrogenase subunit 6
translation: MNLPGPIHDFLLVFLGLGLILGGLGVVLLTNPIFSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAINVLILFAVMFMNGSEYYKDFNLWTVGNGLTSLICTSLFVLLITIISNTTWYGIIWTTRANQIIEQDLVSNGQQIGIHLSTDFFLPFEFISIILLVALIGAIATARQ
SIO_010081: Poptr_cp082
subclass of: SO_0000673
so part of: Poptr_cp082
location: complement(119838..120368)
location: region:119838-120368:-1
so has part: feature:119838-120368:-1:exon

YP_001109560.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:119838-120368:-1:exon

Poptr_cp083
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: ndhI
locus tag: Poptr_cp083
so part of: sequence
location: complement(120788..121318)
location: region:120788-121318:-1
so has part: feature:120788-121318:-1:exon
subclass of: SO_0000010

4929744
type: Gene
SIO_000068: ncbigene

position:120788:-1
position: 120788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121318:-1
position: 121318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120788-121318:-1:exon

Poptr_cp083
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: ndhI
locus tag: Poptr_cp083
EC number: 7.1.1.2
inference: similar to AA sequence:SP:NUIC_ARATH
codon start: 1
transl table: 11
product: NADH dehydrogenase subunit I
translation: MFPMVTGFMNYGQQTVRAARYIGQSFMTTLSHVNRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWELETNIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYNRHELNYNQIALGRLPMSVIDDYTIRTILNSPQSLIKMVKPPLIKD
SIO_010081: Poptr_cp083
subclass of: SO_0000673
so part of: Poptr_cp083
location: complement(120788..121318)
location: region:120788-121318:-1
so has part: feature:120788-121318:-1:exon

YP_001109561.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:120788-121318:-1:exon

Poptr_cp084
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: ndhA
locus tag: Poptr_cp084
so part of: sequence
location: complement(121399..123621)
location: region:121399-123621:-1
so has part: feature:121399-123621:-1:exon
subclass of: SO_0000010

4929745
type: Gene
SIO_000068: ncbigene

position:121399:-1
position: 121399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123621:-1
position: 123621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121399-123621:-1:exon

Poptr_cp084
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: ndhA
locus tag: Poptr_cp084
EC number: 7.1.1.2
exception: nonconsensus splice site
codon start: 1
transl table: 11
product: NADH dehydrogenase subunit 1
translation: MIIDTTTVQAINSFSRLKSLNEVYGIIWMLVPILTLVLGITIGILVIVWLEREISAGIQQRIGPEYAGPFGVLQALADGTKLLFKENLFPSRGDTRLFSIGPSIAVISTLLSYSVIPFGYHFVLADLNIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNSSSTVDIVEAQSKYGLGGWNLWRQPIGFIIFFISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVAVLYLGGWNISIPYISVPEFFDFEINKVGRVFGTTMGILITLVKTYLFLFIPITTRWTLPRLRMDQLLNLGWKFLLPISLGNLLLTTSSQLFSL
SIO_010081: Poptr_cp084
subclass of: SO_0000673
so part of: Poptr_cp084
location: complement(join(121399..121944,123070..123621))
location: region:121399-123621:-1
so has part: feature:123070-123621:-1:exon
so has part: feature:121399-121944:-1:exon

YP_001109562.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123070-123621:-1:exon

position:123070:-1
position: 123070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:121399-121944:-1:exon

position:121944:-1
position: 121944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Poptr_cp085
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: ndhH
locus tag: Poptr_cp085
so part of: sequence
location: complement(123623..124804)
location: region:123623-124804:-1
so has part: feature:123623-124804:-1:exon
subclass of: SO_0000010

4929746
type: Gene
SIO_000068: ncbigene

position:123623:-1
position: 123623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124804:-1
position: 124804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123623-124804:-1:exon

Poptr_cp085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: ndhH
locus tag: Poptr_cp085
EC number: 7.1.1.2
inference: similar to AA sequence:SP:NUCC_ARATH
codon start: 1
transl table: 11
product: NADH dehydrogenase subunit 7
translation: MNVPATRKDFMIVNMGPHHPSMHGVLRLILSLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITINGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGGQTPFFYIFRERELIYDLFEAATGMRMMHNYFRIGGVAADLPHGWLDKCLDFCDYFLTGVAEYQKLITRNPIFLERVEGIGIVSAEEAINWGLSGPMLRASGVRWDLRKVDHYECYDEFDWGVQWQKEGDSLARYLVRIGEMTESVKIIQQALEGIPGGPYENLETRSFDRERNREWNDFEYRFISKKTSPAFELPKQELYVRVEAPKGELGIFLIGDQSSFPWRWKIRPPGFINLQILPQLIKRMKLADIMTILGSIDIIMGEVDR
SIO_010081: Poptr_cp085
subclass of: SO_0000673
so part of: Poptr_cp085
location: complement(123623..124804)
location: region:123623-124804:-1
so has part: feature:123623-124804:-1:exon

YP_001109563.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123623-124804:-1:exon

Poptr_cp086
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: rps15
locus tag: Poptr_cp086
so part of: sequence
location: complement(124916..125188)
location: region:124916-125188:-1
so has part: feature:124916-125188:-1:exon
subclass of: SO_0000010

4929747
type: Gene
SIO_000068: ncbigene

position:124916:-1
position: 124916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125188:-1
position: 125188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124916-125188:-1:exon

Poptr_cp086
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: rps15
locus tag: Poptr_cp086
inference: similar to AA sequence:SP:RR15_ARATH
codon start: 1
transl table: 11
product: ribosomal protein S15
translation: MVKSSFISIISQEDKKENKGSVEFQIVSFTNKIRRLTSHLELHRKDYLSQRGLRKILGKRQRLLSYLAKKNGVRYKELISQLNIRESKTR
SIO_010081: Poptr_cp086
subclass of: SO_0000673
so part of: Poptr_cp086
location: complement(124916..125188)
location: region:124916-125188:-1
so has part: feature:124916-125188:-1:exon

YP_001109564.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:124916-125188:-1:exon

Poptr_cp087
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cp087
so part of: sequence
location: complement(125620..131088)
location: region:125620-131088:-1
so has part: feature:125620-131088:-1:exon
subclass of: SO_0000010

4929748
type: Gene
SIO_000068: ncbigene

position:125620:-1
position: 125620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131088:-1
position: 131088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125620-131088:-1:exon

Poptr_cp087
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
locus tag: Poptr_cp087
inference: similar to AA sequence:SP:YCF1_ARATH
note: hypothetical 218 kDa protein
codon start: 1
transl table: 11
product: Ycf1
translation: MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSMGPSYLFLLRARVIEEGEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLILVWIQQNNSLRSNKYIRSNKYLVSELRNSMARIFSILLFITCVYSLGRIPSPIFTKKLKETSETEEREEETDVEIETTPETKGTKQEQEGSTEEDPSSSLFSEEKENPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNRPVYETFYLDGNQENSKLEIFLDKKDKDLVWFEKPRVTILFDYKRWNRPFRYIKNDQFKNAVRKEMSQYFFSTCRSDGKERISFTYPPSLSTFLEMIQRKMSLFTTEKLSSDELYNHWNYNNEQKKKNLSNEFINRVEVLDKGFRVLNILEKKTRLCNDETKKEYLPKIYDPFLSGLYRGKVNFFFSPSIINEISIKNYIEMLWINKIYLILLISNYQEFEPKMEDRIRILKFLFDAIIVDSKNKKIVKKSTEIKKEISKQIPRWSYKLIDDLEQQEGENEENAAEDHEIRSRKAKRVVIFTDNQENPDSNTYNNSKTKDTTNFDQTGEVALIRYSQQSDFRRDIIKGSMRTQRRKIAILKLFQANLHSPLFLDRIDKFLFFAFDTSELMKIMFINWMCKNAEFTISDSTSTYTEEKTKESDKKEKEEIKNRREEDKREEKVRIEIAETWDSIIFAQAIRGCVLVIQSILRKYILLPSLIIAKNIIRMLLFQIPEWSEDLKDWNREMHVKCTYNGVQLSETEFPKNWLTDGIQIKILFPFRLQPWHRSKFKFLSKDPIKKKRQKNDFCFLTVWGMEAELPFGSPRKELSLFEPIFKKLKKKIRKLKKNGFLTLTILKEKRKLFLHLPKETKNWFIKGILFLKEIINKFSKSKRNPILLFGFREVYELNETKNEKNSPINNRTIHKFSTSIRSMDWINYSLTEKKMKDLNARTKTIRNQIEKITKEKKKRFLISERNISPNKLSYNAKRLKLKSSKNILQILKRNNAQLVRKSYFFIKILIEKIYIDILLAIINIPRINVQFFLESPRKMINKYIYMYNKKENHKRIEKTNQNTLIHFISIIKKALNYSNFNKNSKIFYNITSLSQAYVFYKLSQVQVINLYKLRSVFQYHGASLFLKNEIKDYFGVQGRFQFKLKDTNFRNSVMNEWKNWVRSTYQYKYDLSQIRWSSLISQKWRNRMNQQHMIQNKDLNKWNLYDKDQLIHYEKQNNFEVDSLSNQKDNFKKYYRYNILLYKSINYEDKKDSSIYELPFQLNNKQELFYNYKIDKRKLFDMSGGIPVNKHLTEDDIIDTEKSSHRKYLDWRILHFGLRKKVDIESWIDTGTKQKKNLFDWMGMNEEILDRPTSNLEFWFFPKFVILCNAYKIKSWVIPIKLLFLNFNGTKNVSENKKINKKKNNDPFISISSNETKSIQLKNQNHEEKESEDQVDLESVLVNQEKDVEEDYVRSDRKERRKKKQYKSNTEAELDFLLKRYLCFQLRWDDSLNQKIINNIKIYCLLLRLTNPREIIISSIQRGELSLDILMIQKDLTLTELMKKGILIIESTRLSVKNDGKFIMYQTINILLVHKRKQQINQRYRKKNYIDKKNFNESIVINQSLTRNKDKNNYDLPVPENLLSSKHRRELRILISFNSKNGNDINTEIINNNNIKNHAHIIDKRKHFDRDKNKLIKLKLFLWPNYRLEDLACINRYWFDTNNASRFSMIRIHICPRLKSR
SIO_010081: Poptr_cp087
subclass of: SO_0000673
so part of: Poptr_cp087
location: complement(125620..131088)
location: region:125620-131088:-1
so has part: feature:125620-131088:-1:exon

YP_001109565.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:125620-131088:-1:exon

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 3694
note: inverted repeat A
rpt type: inverted
so part of: sequence
location: 129382..157033
location: region:129382-157033:1
so has part: feature:129382-157033:1:region

position:129382:1
position: 129382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129382-157033:1:region

Poptr_cpR035
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cpR035
so part of: sequence
location: 131424..131495
location: region:131424-131495:1
so has part: feature:131424-131495:1:exon
subclass of: SO_0000663

4929749
type: Gene
SIO_000068: ncbigene

position:131424:1
position: 131424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131495:1
position: 131495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131424-131495:1:exon

Poptr_cpR035
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3694
locus tag: Poptr_cpR035
product: tRNA-Asn
SIO_010081: Poptr_cpR035
subclass of: SO_0000673
so part of: Poptr_cpR035
location: 131424..131495
location: region:131424-131495:1
so has part: feature:131424-131495:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:131424-131495:1:exon

Poptr_cpR036
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cpR036
so part of: sequence
location: complement(132187..132260)
location: region:132187-132260:-1
so has part: feature:132187-132260:-1:exon
subclass of: SO_0000663

4929750
type: Gene
SIO_000068: ncbigene

position:132187:-1
position: 132187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132260:-1
position: 132260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132187-132260:-1:exon

Poptr_cpR036
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3694
locus tag: Poptr_cpR036
product: tRNA-Arg
SIO_010081: Poptr_cpR036
subclass of: SO_0000673
so part of: Poptr_cpR036
location: complement(132187..132260)
location: region:132187-132260:-1
so has part: feature:132187-132260:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:132187-132260:-1:exon

Poptr_cpR037
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cpR037
so part of: sequence
location: complement(132507..132627)
location: region:132507-132627:-1
so has part: feature:132507-132627:-1:exon
subclass of: SO_0000573

4929751
type: Gene
SIO_000068: ncbigene

position:132507:-1
position: 132507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132627:-1
position: 132627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132507-132627:-1:exon

Poptr_cpR037
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 3694
locus tag: Poptr_cpR037
product: 5S ribosomal RNA
SIO_010081: Poptr_cpR037
subclass of: SO_0000673
so part of: Poptr_cpR037
location: complement(132507..132627)
location: region:132507-132627:-1
so has part: feature:132507-132627:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:132507-132627:-1:exon

Poptr_cp088
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cp088
so part of: sequence
location: 132587..132847
location: region:132587-132847:1
so has part: feature:132587-132847:1:exon
subclass of: SO_0000010

4929752
type: Gene
SIO_000068: ncbigene

position:132587:1
position: 132587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132847:1
position: 132847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132587-132847:1:exon

Poptr_cp088
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
locus tag: Poptr_cp088
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDWCGSSTPRTPEYRTMNEERHERKAYWLVIVRPQFLTGGDTKGLCPSITWIDREGGRSFWFFFHVVKELNNKNRWRVPDRIDRVM
SIO_010081: Poptr_cp088
subclass of: SO_0000673
so part of: Poptr_cp088
location: 132587..132847
location: region:132587-132847:1
so has part: feature:132587-132847:1:exon

YP_001109566.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:132587-132847:1:exon

Poptr_cpR038
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cpR038
so part of: sequence
location: complement(132855..132957)
location: region:132855-132957:-1
so has part: feature:132855-132957:-1:exon
subclass of: SO_0000573

4929753
type: Gene
SIO_000068: ncbigene

position:132855:-1
position: 132855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132957:-1
position: 132957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132855-132957:-1:exon

Poptr_cpR038
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 3694
locus tag: Poptr_cpR038
product: 4.5S ribosomal RNA
SIO_010081: Poptr_cpR038
subclass of: SO_0000673
so part of: Poptr_cpR038
location: complement(132855..132957)
location: region:132855-132957:-1
so has part: feature:132855-132957:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:132855-132957:-1:exon

Poptr_cpR039
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cpR039
so part of: sequence
location: complement(133056..135864)
location: region:133056-135864:-1
so has part: feature:133056-135864:-1:exon
subclass of: SO_0000573

4929754
type: Gene
SIO_000068: ncbigene

position:133056:-1
position: 133056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135864:-1
position: 135864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133056-135864:-1:exon

Poptr_cpR039
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 3694
locus tag: Poptr_cpR039
product: 23S ribosomal RNA
SIO_010081: Poptr_cpR039
subclass of: SO_0000673
so part of: Poptr_cpR039
location: complement(133056..135864)
location: region:133056-135864:-1
so has part: feature:133056-135864:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:133056-135864:-1:exon

Poptr_cpR040
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: trnA
locus tag: Poptr_cpR040
so part of: sequence
location: complement(136017..136891)
location: region:136017-136891:-1
so has part: feature:136017-136891:-1:exon
subclass of: SO_0000663

4929755
type: Gene
SIO_000068: ncbigene

position:136017:-1
position: 136017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136891:-1
position: 136891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136017-136891:-1:exon

Poptr_cpR040
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3694
gene: trnA
locus tag: Poptr_cpR040
product: tRNA-Ala
SIO_010081: Poptr_cpR040
subclass of: SO_0000673
so part of: Poptr_cpR040
location: complement(join(136017..136051,136854..136891))
location: region:136017-136891:-1
so has part: feature:136854-136891:-1:exon
so has part: feature:136017-136051:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:136854-136891:-1:exon

position:136854:-1
position: 136854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:136017-136051:-1:exon

position:136051:-1
position: 136051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Poptr_cpR041
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cpR041
so part of: sequence
location: complement(136961..137980)
location: region:136961-137980:-1
so has part: feature:136961-137980:-1:exon
subclass of: SO_0000663

4929756
type: Gene
SIO_000068: ncbigene

position:136961:-1
position: 136961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137980:-1
position: 137980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136961-137980:-1:exon

Poptr_cpR041
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3694
locus tag: Poptr_cpR041
product: tRNA-Ile
SIO_010081: Poptr_cpR041
subclass of: SO_0000673
so part of: Poptr_cpR041
location: complement(join(136961..136995,137944..137980))
location: region:136961-137980:-1
so has part: feature:137944-137980:-1:exon
so has part: feature:136961-136995:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:137944-137980:-1:exon

position:137944:-1
position: 137944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:136961-136995:-1:exon

position:136995:-1
position: 136995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Poptr_cp089
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cp089
so part of: sequence
location: complement(137041..137256)
location: region:137041-137256:-1
so has part: feature:137041-137256:-1:exon
subclass of: SO_0000010

4929757
type: Gene
SIO_000068: ncbigene

position:137041:-1
position: 137041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137256:-1
position: 137256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137041-137256:-1:exon

Poptr_cp089
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
locus tag: Poptr_cp089
note: similar to orf72 of Spinacia oleracea
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGAGLKKDLRVSKVGPGGSLNAFFFLLIGVISKRLAMVRKKGGTSTLGERSTPESCMLRSGRMNRSRKGIY
SIO_010081: Poptr_cp089
subclass of: SO_0000673
so part of: Poptr_cp089
location: complement(137041..137256)
location: region:137041-137256:-1
so has part: feature:137041-137256:-1:exon

YP_001109567.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:137041-137256:-1:exon

Poptr_cpR042
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cpR042
so part of: sequence
location: complement(138276..139766)
location: region:138276-139766:-1
so has part: feature:138276-139766:-1:exon
subclass of: SO_0000573

4929758
type: Gene
SIO_000068: ncbigene

position:138276:-1
position: 138276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139766:-1
position: 139766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138276-139766:-1:exon

Poptr_cpR042
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 3694
locus tag: Poptr_cpR042
product: 16S ribosomal RNA
SIO_010081: Poptr_cpR042
subclass of: SO_0000673
so part of: Poptr_cpR042
location: complement(138276..139766)
location: region:138276-139766:-1
so has part: feature:138276-139766:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:138276-139766:-1:exon

Poptr_cpR043
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cpR043
so part of: sequence
location: complement(139992..140063)
location: region:139992-140063:-1
so has part: feature:139992-140063:-1:exon
subclass of: SO_0000663

4929759
type: Gene
SIO_000068: ncbigene

position:139992:-1
position: 139992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140063:-1
position: 140063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139992-140063:-1:exon

Poptr_cpR043
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3694
locus tag: Poptr_cpR043
product: tRNA-Val
SIO_010081: Poptr_cpR043
subclass of: SO_0000673
so part of: Poptr_cpR043
location: complement(139992..140063)
location: region:139992-140063:-1
so has part: feature:139992-140063:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:139992-140063:-1:exon

Poptr_cp090
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cp090
so part of: sequence
location: complement(140395..140676)
location: region:140395-140676:-1
so has part: feature:140395-140676:-1:exon
subclass of: SO_0000010

4929760
type: Gene
SIO_000068: ncbigene

position:140395:-1
position: 140395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140676:-1
position: 140676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140395-140676:-1:exon

Poptr_cp090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
locus tag: Poptr_cp090
exception: nonconsensus splice site
note: similar to orf70b in Nicotiana tabacum
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKFINEVVNGGVTIILFVVMNLVCVPKKRNLSIFRGLKGAWKHIRTLEWKWKRDVTPVPSEMVRSLAQEEGVDPYHLDLVLISLFF
SIO_010081: Poptr_cp090
subclass of: SO_0000673
so part of: Poptr_cp090
location: complement(join(140395..140628,140650..140676))
location: region:140395-140676:-1
so has part: feature:140650-140676:-1:exon
so has part: feature:140395-140628:-1:exon

YP_001109568.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:140650-140676:-1:exon

position:140650:-1
position: 140650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:140395-140628:-1:exon

position:140628:-1
position: 140628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Poptr_cp092
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cp092
so part of: sequence
location: 142371..142568
location: region:142371-142568:1
so has part: feature:142371-142568:1:exon
subclass of: SO_0000010

4929761
type: Gene
SIO_000068: ncbigene

position:142371:1
position: 142371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142568:1
position: 142568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142371-142568:1:exon

Poptr_cp092
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
locus tag: Poptr_cp092
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTLSVSTNNSKCLDFFRAGPSQIAMIRSTSFYTISETQGLNRMDMENTGFPILAGKGGKRILNLK
SIO_010081: Poptr_cp092
subclass of: SO_0000673
so part of: Poptr_cp092
location: 142371..142568
location: region:142371-142568:1
so has part: feature:142371-142568:1:exon

YP_001109569.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:142371-142568:1:exon

Poptr_cp093
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: rps7
locus tag: Poptr_cp093
so part of: sequence
location: 142776..143243
location: region:142776-143243:1
so has part: feature:142776-143243:1:exon
subclass of: SO_0000010

4929762
type: Gene
SIO_000068: ncbigene

position:142776:1
position: 142776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143243:1
position: 143243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142776-143243:1:exon

Poptr_cp093
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: rps7
locus tag: Poptr_cp093
codon start: 1
transl table: 11
product: ribosomal protein S7
translation: MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQILYRAMKKIQQKTETNPLSVLHQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMVFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
SIO_010081: Poptr_cp093
subclass of: SO_0000673
so part of: Poptr_cp093
location: 142776..143243
location: region:142776-143243:1
so has part: feature:142776-143243:1:exon

YP_001109570.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:142776-143243:1:exon

Poptr_cp094
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: ndhB
locus tag: Poptr_cp094
so part of: sequence
location: 143575..145789
location: region:143575-145789:1
so has part: feature:143575-145789:1:exon
subclass of: SO_0000010

4929763
type: Gene
SIO_000068: ncbigene

position:143575:1
position: 143575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145789:1
position: 145789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143575-145789:1:exon

Poptr_cp094
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: ndhB
locus tag: Poptr_cp094
EC number: 7.1.1.2
inference: similar to AA sequence:SP:NU2C_MAIZE
exception: nonconsensus splice site
codon start: 1
transl table: 11
product: NADH dehydrogenase subunit 2
translation: MIWHVQNENFILDSTRIFMKAFHLLLFDGSFIFPECILIFGLILLLMIDSTSDQKDMPWLYFISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSPAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASASATRIFDIPFYFSSNEWHLLLEILAILSMIVGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMNLGTFACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFLVSIGLLTSVLSIYYYLKIIKLLMTGQNQEITPHVRNYRGSPLRSNNSIELSMIVCVIASTIPGISMSPIIEIAQDTLF
SIO_010081: Poptr_cp094
subclass of: SO_0000673
so part of: Poptr_cp094
location: join(143575..144351,145034..145789)
location: region:143575-145789:1
so has part: feature:143575-144351:1:exon
so has part: feature:145034-145789:1:exon

YP_001109571.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:143575-144351:1:exon

position:144351:1
position: 144351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:145034-145789:1:exon

position:145034:1
position: 145034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Poptr_cp095
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cp095
so part of: sequence
location: complement(146131..146316)
location: region:146131-146316:-1
so has part: feature:146131-146316:-1:exon
subclass of: SO_0000010

4929764
type: Gene
SIO_000068: ncbigene

position:146131:-1
position: 146131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146316:-1
position: 146316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146131-146316:-1:exon

Poptr_cp095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
locus tag: Poptr_cp095
note: similar to Nicotiana tabacum orf 79
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEYMTKVECWSISIDRSCHIGPSQTSNCFDLNYPEDALSILYQKNGQSNLFLDSIEAKRGE
SIO_010081: Poptr_cp095
subclass of: SO_0000673
so part of: Poptr_cp095
location: complement(146131..146316)
location: region:146131-146316:-1
so has part: feature:146131-146316:-1:exon

YP_001109572.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:146131-146316:-1:exon

Poptr_cpR044
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cpR044
so part of: sequence
location: 146369..146449
location: region:146369-146449:1
so has part: feature:146369-146449:1:exon
subclass of: SO_0000663

4929765
type: Gene
SIO_000068: ncbigene

position:146369:1
position: 146369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146449:1
position: 146449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146369-146449:1:exon

Poptr_cpR044
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3694
locus tag: Poptr_cpR044
product: tRNA-Leu
SIO_010081: Poptr_cpR044
subclass of: SO_0000673
so part of: Poptr_cpR044
location: 146369..146449
location: region:146369-146449:1
so has part: feature:146369-146449:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:146369-146449:1:exon

Poptr_cp096
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
locus tag: Poptr_cp096
so part of: sequence
location: 146472..146687
location: region:146472-146687:1
so has part: feature:146472-146687:1:exon
subclass of: SO_0000010

4929766
type: Gene
SIO_000068: ncbigene

position:146472:1
position: 146472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146687:1
position: 146687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146472-146687:1:exon

Poptr_cp096
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
locus tag: Poptr_cp096
inference: similar to RNA sequence, mRNA:INSD:AI488863.1
note: TAMU Lycopersicon esculentum; similar to orf115 Nicotiana tabacum
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNSIRDLGSNRYINIDSIRDLLLNWNKFGRGSRNLGDLLYLMNNEWGVCFEIVRPGTTPESMSSTGITQR
SIO_010081: Poptr_cp096
subclass of: SO_0000673
so part of: Poptr_cp096
location: 146472..146687
location: region:146472-146687:1
so has part: feature:146472-146687:1:exon

YP_001109573.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:146472-146687:1:exon

Poptr_cp098
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: ycf2
locus tag: Poptr_cp098
so part of: sequence
location: complement(147491..154348)
location: region:147491-154348:-1
so has part: feature:147491-154348:-1:exon
subclass of: SO_0000010

4929768
type: Gene
SIO_000068: ncbigene

position:147491:-1
position: 147491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:154348:-1
position: 154348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147491-154348:-1:exon

Poptr_cp098
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: ycf2
locus tag: Poptr_cp098
note: hypothetical protein RF2
codon start: 1
transl table: 11
product: Ycf2
translation: MKGHQFKSWIFELREILREIKNSHYFLDSWTQFNSVGSFIHIFFHQERFIKLLDSRIWSILFSRNSQGSTSNRYFTIKGVVLFVVVVLIYRINNRKMVERKNLYLTGLLPIPMNSIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESRFLDPKESTWVLPITKKCIMSESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDIKYLEFLFVYYMDDPIRKDHDWELFDRLSPRKGRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSRKKWAISLQNCAQFHMWQFRQDLFVSWGNNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKARNISSNIQYDSTRSSFVQGRDSSQLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCLSGYSSMSRLFTEGAKEMNNHLLPEEIEEFLGNPTRSIRSFFSDRWSELHLGSNPTERSTRDQKLLKKEQDVSFVPSRRSENKEIVNIFKTITYLQNTVSIHPISSDPGCDMVLKDELDMDSSNKISFLNKNPFFDLFHLFHDRNGGGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFFIDSYGLDQKQFLNEVFNSRDESKKKSLLVLPPIFYEENESFYRRIRKKWVRISCGNDLEDPKQKRVVFASNNIMEAVNQYGLIRNLIQIQYSTYGYIRNVLNQFFLMNRSDRNFEYGIQKDQIGNDTLNHRTLMKYTINQHLSNLKQSQKKWFDPLIFLSRTERSMNWDPNSYRYKWSNGSNNFQEHLEHFISEQKSRFLFQVVFDRLRINQYSIDWSEVIDKKDLSKSLPFFLSKLLLFLSKFLLFLSNSLPFFFVSFGNIPIHRSEIHIYELKGPNDQLCNQLLEPIGLQIVHLKKWKPFLLDDHDTSQKSKFLINGGTISPFLFNKIPKWMIDSFHTRNNRRKSFDNTDSSFSMISHDQDNWLNPVKPFHRSSLISSFYKANRLRFLNNLHHFCFYCNKRFPFYVEKARIKNYDFTYGQFLNILFIRNKIFSLCGGKKKHAFLERDTISPIESQVSNIFIPNDFPQSGDESLYKSFHFPIRPDPFVRRAIYSIADVSGTPLTEGQIFNFERTYCQPLSDINLSDSEGKNLHQYLNFNSNMGLIHTPCSEKYLPSEKRKKRSLCLKKCVEKGQMYRTFQRDSAFSTLSKWNLFQTYMPWFLTSTGYKYLNLIFLDTFSDHLLPILSSSQKIVSIFHDIMHGSDISWRILQKNLWKTQWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTRLRSPNVREFLYSILFLLLVAGYLVRTHLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDLLEEIRGSASGGNMLWGGGPAYGVKSIRSKKKFFNINLIDLISIIPNPINRITFSRNTRHLSHTSKEIYSLIRKRKNVNGDWIDDKIESLVANSDSIDDKEREFLVQFSTLTTEKRIDQILLSLTHSDHLSKNDSGYQMIEEPGAIYLRYLVDIHKKYLMNYEFNTPCLAERRIFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFLNKFLDNKPKGFLIDDRDDIDDSDDIDVSDDIDRDLDTELELLTRMNVLTMDMMPEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQRKHVFTLSYSRGFHLEKKMFHTKRFGSVTMGSNVRDLVALTNEALSISITQKKSIIDTNIIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVFLSNCPIDPISIYMKKKSCNEGDSYLYKWYFELGTSMKKLTILLYLLSCSAGSIAQDLWSLPGPDEKNGITYYGLVENDSDLVHGLLEVE…
SIO_010081: Poptr_cp098
subclass of: SO_0000673
so part of: Poptr_cp098
location: complement(147491..154348)
location: region:147491-154348:-1
so has part: feature:147491-154348:-1:exon

YP_001109575.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147491-154348:-1:exon

Poptr_cpR045
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: trnI-CAU
locus tag: Poptr_cpR045
so part of: sequence
location: 154443..154516
location: region:154443-154516:1
so has part: feature:154443-154516:1:exon
subclass of: SO_0000663

4929769
type: Gene
SIO_000068: ncbigene

position:154443:1
position: 154443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154516:1
position: 154516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154443-154516:1:exon

Poptr_cpR045
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3694
gene: trnI-CAU
locus tag: Poptr_cpR045
product: tRNA-Ile
SIO_010081: Poptr_cpR045
subclass of: SO_0000673
so part of: Poptr_cpR045
location: 154443..154516
location: region:154443-154516:1
so has part: feature:154443-154516:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:154443-154516:1:exon

Poptr_cp099
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: rpl23
locus tag: Poptr_cp099
so part of: sequence
location: 154682..154963
location: region:154682-154963:1
so has part: feature:154682-154963:1:exon
subclass of: SO_0000010

4929770
type: Gene
SIO_000068: ncbigene

position:154682:1
position: 154682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154963:1
position: 154963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154682-154963:1:exon

Poptr_cp099
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: rpl23
locus tag: Poptr_cp099
note: 60S ribosomal protein L23
codon start: 1
transl table: 11
product: ribosomal protein L23
translation: MDGIKYAVVTDKSIRLLLKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHRLPGKGRRMRPIMGHTMHYRRMIITLQPGYSIPPLRKKRT
SIO_010081: Poptr_cp099
subclass of: SO_0000673
so part of: Poptr_cp099
location: 154682..154963
location: region:154682-154963:1
so has part: feature:154682-154963:1:exon

YP_001109576.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:154682-154963:1:exon

Poptr_cp100
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: rpl2
locus tag: Poptr_cp100
so part of: sequence
location: 154982..156474
location: region:154982-156474:1
so has part: feature:154982-156474:1:exon
subclass of: SO_0000010

4929771
type: Gene
SIO_000068: ncbigene

position:154982:1
position: 154982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156474:1
position: 156474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154982-156474:1:exon

Poptr_cp100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: rpl2
locus tag: Poptr_cp100
exception: nonconsensus splice site
codon start: 1
transl table: 11
product: ribosomal protein L2
translation: MAIHLYKTSTPSTRNGAVDSQVKSNTRNNLIYGQHRCGKGRNSRGIITARHRGGGHKRLYRKIDFRRNEKYIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIISGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
SIO_010081: Poptr_cp100
subclass of: SO_0000673
so part of: Poptr_cp100
location: join(154982..155371,156040..156474)
location: region:154982-156474:1
so has part: feature:154982-155371:1:exon
so has part: feature:156040-156474:1:exon

YP_001109577.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:154982-155371:1:exon

position:155371:1
position: 155371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:156040-156474:1:exon

position:156040:1
position: 156040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Poptr_cp101
type: Gene
subclass of: SO_0000704
RO_0002162: 3694
gene: rps19
locus tag: Poptr_cp101
so part of: sequence
location: 156536..156814
location: region:156536-156814:1
so has part: feature:156536-156814:1:exon
subclass of: SO_0000010

4929772
type: Gene
SIO_000068: ncbigene

position:156536:1
position: 156536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156814:1
position: 156814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156536-156814:1:exon

Poptr_cp101
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3694
gene: rps19
locus tag: Poptr_cp101
codon start: 1
transl table: 11
product: ribosomal protein S19
translation: MTRSLKKNPFVANHLLRKINKLNTKAEKNLIVTWSRASTIIPTMIGHTIAIHNGKEHLPIYITDRMVGHKLGEFAPTLNFRGHAKNDNKSRR
SIO_010081: Poptr_cp101
subclass of: SO_0000673
so part of: Poptr_cp101
location: 156536..156814
location: region:156536-156814:1
so has part: feature:156536-156814:1:exon

YP_001109578.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:156536-156814:1:exon