Mycobacteroides abscessus strain GZ002 plasmid pMabS_GZ002, complete sequence.
type: Entry
definition: Mycobacteroides abscessus strain GZ002 plasmid pMabS_GZ002, complete sequence.
sequence version: NZ_CP034180.1
sequence date: 2022-12-13
sequence: sequence
division: CON
label: NZ_CP034180.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN10391661
keyword: RefSeq
source: Mycobacteroides abscessus (Mycobacterium abscessus)
organism: Mycobacteroides abscessus
taxonomy: Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales; Mycobacteriaceae; Mycobacteroides.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP034180.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. version 4.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 100.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/13/2022 06:40:45\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,022\nCDSs (total) :: 4,969\nGenes (coding) :: 4,940\nCDSs (with protein) :: 4,940\nGenes (RNA) :: 53\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 47\nncRNAs :: 3\nPseudo Genes (total) :: 29\nCDSs (without protein) :: 29\nPseudo Genes (ambiguous residues) :: 0 of 29\nPseudo Genes (frameshifted) :: 18 of 29\nPseudo Genes (incomplete) :: 13 of 29\nPseudo Genes (internal stop) :: 2 of 29\nPseudo Genes (multiple problems) :: 4 of 29\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 15203
topology: linear
so has quality: SO_0000987
location: 1..15203
location: region:1-15203:1
RO_0002162: 36809

NZ_CP034180
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN10391661
type: BioSample
SIO_000068: biosample

1
title: Comparative genomics and methylome analysis in Mycobacterium abscessus clinical isolates
author: Chhotaray, C.
author: Wang, S.
author: Fang, C.
author: Tan, Y.
author: Liu, Y.
author: Lu, Z.
author: Cai, X.
author: Hameed, H.A.
author: Islam, M.M.
author: Surineni, G.
author: Tan, S.
author: Liu, J.
author: Zhang, T.
journal: Unpublished

2
title: Direct Submission
author: Chhotaray, C.
author: Wang, S.
author: Fang, C.
author: Tan, Y.
author: Liu, Y.
author: Lu, Z.
author: Cai, X.
author: Hameed, H.A.
author: Islam, M.M.
author: Surineni, G.
author: Tan, S.
author: Liu, J.
author: Zhang, T.
journal: Submitted (27-NOV-2018) State Key Laboratory of Respiratory Disease (SKLRD), Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences (CAS), 190 Kaiyuan Ave, Room A132, Science Park, Huangpu District, Guangzhou, Guangdong 510530, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition
type: FuzzyPosition

position:15203:1
position: 15203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-15203:1:source
so part of: sequence
organism: Mycobacteroides abscessus
mol type: genomic DNA
strain: GZ002
host: Homo sapiens
plasmid: pMabS_GZ002
country: China
lat lon: 23.1291 N 113.2644 E
collection date: 2015-04-16
collected by: Guangzhou chest hospital

36809
type: Taxonomy
SIO_000068: taxonomy

EFV83_RS00005
type: Gene
subclass of: SO_0000704
RO_0002162: 36809
locus tag: EFV83_RS00005
old locus tag: EFV83_00005
so part of: sequence
location: <1..273
location: region:1-273:1
so has part: feature:1-273:1:exon
subclass of: SO_0000010

66968220
type: Gene
SIO_000068: ncbigene

position:273:1
position: 273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-273:1:exon

EFV83_RS00005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36809
locus tag: EFV83_RS00005
old locus tag: EFV83_00005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012390405.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: LTDDDVQALDRRAREVGDVIGWDLQFVVAPNAEYVGLAAGGGAEHADEIIVLGPSRITDLAVHEIDLALDALQRGERHIILDEDGDPRLI
SIO_010081: EFV83_RS00005
subclass of: SO_0000673
so part of: EFV83_RS00005
location: <1..273
location: region:1-273:1
so has part: feature:1-273:1:exon

WP_128382991.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-273:1:exon

EFV83_RS25430
type: Gene
subclass of: SO_0000704
RO_0002162: 36809
locus tag: EFV83_RS25430
so part of: sequence
location: complement(297..440)
location: region:297-440:-1
so has part: feature:297-440:-1:exon
subclass of: SO_0000010

66973179
type: Gene
SIO_000068: ncbigene

position:297:-1
position: 297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:440:-1
position: 440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297-440:-1:exon

EFV83_RS25430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36809
locus tag: EFV83_RS25430
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017555453.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIHAEAEPDPDDLDAGYAQLASEFNSETADVERRAARDRYAGRTGEA
SIO_010081: EFV83_RS25430
subclass of: SO_0000673
so part of: EFV83_RS25430
location: complement(297..440)
location: region:297-440:-1
so has part: feature:297-440:-1:exon

WP_012390404.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:297-440:-1:exon

EFV83_RS25705
type: Gene
subclass of: SO_0000704
RO_0002162: 36809
locus tag: EFV83_RS25705
pseudo: true
so part of: sequence
location: complement(448..>546)
location: region:448-546:-1
so has part: feature:448-546:-1:exon
subclass of: SO_0000010

70080227
type: Gene
SIO_000068: ncbigene

position:448:-1
position: 448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:546:-1
position: 546
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:448-546:-1:exon

EFV83_RS25705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36809
locus tag: EFV83_RS25705
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003414599.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: EFV83_RS25705
subclass of: SO_0000673
so part of: EFV83_RS25705
location: complement(448..>546)
location: region:448-546:-1
so has part: feature:448-546:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:448-546:-1:exon

EFV83_RS00015
type: Gene
subclass of: SO_0000704
RO_0002162: 36809
locus tag: EFV83_RS00015
old locus tag: EFV83_00015
pseudo: true
so part of: sequence
location: complement(656..1169)
location: region:656-1169:-1
so has part: feature:656-1169:-1:exon
subclass of: SO_0000010

66968222
type: Gene
SIO_000068: ncbigene

position:656:-1
position: 656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1169:-1
position: 1169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:656-1169:-1:exon

EFV83_RS00015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36809
locus tag: EFV83_RS00015
old locus tag: EFV83_00015
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006680475.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: recombinase family protein
SIO_010081: EFV83_RS00015
subclass of: SO_0000673
so part of: EFV83_RS00015
location: complement(656..1169)
location: region:656-1169:-1
so has part: feature:656-1169:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:656-1169:-1:exon

EFV83_RS00020
type: Gene
subclass of: SO_0000704
RO_0002162: 36809
locus tag: EFV83_RS00020
old locus tag: EFV83_00020
so part of: sequence
location: complement(1217..1651)
location: region:1217-1651:-1
so has part: feature:1217-1651:-1:exon
subclass of: SO_0000010

66968223
type: Gene
SIO_000068: ncbigene

position:1217:-1
position: 1217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1651:-1
position: 1651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1217-1651:-1:exon

EFV83_RS00020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36809
locus tag: EFV83_RS00020
old locus tag: EFV83_00020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012296232.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Mercuric transporter MerT
translation: MATKRTSPSVAGILGLVGIGVLPLLCCAGPALIAGGALGALGGVLGNPWLIGATAVLVIAAVGYALRRHRRQDCHTASTDRKSYIMTAVVATSADAPVRCPRILSQTGGNGDTLKDTDGSRPGPQAALVGPEKTVPPERVRTCR
SIO_010081: EFV83_RS00020
subclass of: SO_0000673
so part of: EFV83_RS00020
location: complement(1217..1651)
location: region:1217-1651:-1
so has part: feature:1217-1651:-1:exon

WP_012296232.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1217-1651:-1:exon

EFV83_RS00025
type: Gene
subclass of: SO_0000704
RO_0002162: 36809
locus tag: EFV83_RS00025
old locus tag: EFV83_00025
so part of: sequence
location: complement(1651..2034)
location: region:1651-2034:-1
so has part: feature:1651-2034:-1:exon
subclass of: SO_0000010

66968224
type: Gene
SIO_000068: ncbigene

position:2034:-1
position: 2034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1651-2034:-1:exon

EFV83_RS00025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36809
locus tag: EFV83_RS00025
old locus tag: EFV83_00025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012296233.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metalloregulator ArsR/SmtB family transcription factor
translation: MTCRTDPRLAFLPETDTGVEMVAKFFRALGDPGRLRLLEFLVSTEHTVTECVTHLGLAQSRVSSHLACLSDCGYVQVRREGRFAHYKVADPRVADLVMLARSLAADNAAALADCVRITAAEAPQVPA
SIO_010081: EFV83_RS00025
subclass of: SO_0000673
so part of: EFV83_RS00025
location: complement(1651..2034)
location: region:1651-2034:-1
so has part: feature:1651-2034:-1:exon

WP_012296233.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1651-2034:-1:exon

EFV83_RS00030
type: Gene
subclass of: SO_0000704
RO_0002162: 36809
gene: merA
locus tag: EFV83_RS00030
old locus tag: EFV83_00030
so part of: sequence
location: 2173..3591
location: region:2173-3591:1
so has part: feature:2173-3591:1:exon
subclass of: SO_0000010

66968225
type: Gene
SIO_000068: ncbigene

position:2173:1
position: 2173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3591:1
position: 3591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2173-3591:1:exon

EFV83_RS00030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36809
gene: merA
locus tag: EFV83_RS00030
old locus tag: EFV83_00030
EC number: 1.16.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012296234.1
GO function: GO:0016152 - mercury (II) reductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: mercury(II) reductase
translation: MGYDLAIIGSGGAAFAAAIAATTAGRRVVMIERATIGGTCVNVGCVPSKALLAAADALHGASTAARFPGIAASAAPVDGPALMTGKDALVQTLRGEKYVDLAAHYGWDVVEGDAQFVGDAGGPCLTVETPGGATLHVEAEHYLIATGSAPWAPPVDGLADTGSLTSTTAMDLDRLPESMIVLGGGYVGLEQAQLFARLGTVVTVVTRSPLLSAEEPEVSAVLADVFGDEDIRVHTHTTVTGVRRDEHGYSLTAERGTQRLALHAEQLLVATGRRPVTAGLNLDAVGVKTGPRGEVLVDDHLRSTTARIWAAGDVTGGPQFVYVAAAQGTLVADNAFGRAARTLDYTALPRVVFTSPAVASVGMTDAQATAAGIQCDCRTIPLQYVTRAIVNRDTRGLVKLVAAADTGRLLGVHVVAENAGDVITAATYALTAGMTVEQLAHTWAPYLTMAESLKLAAQAYTTDVATLSCCAS
SIO_010081: EFV83_RS00030
subclass of: SO_0000673
so part of: EFV83_RS00030
location: 2173..3591
location: region:2173-3591:1
so has part: feature:2173-3591:1:exon

WP_012296234.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2173-3591:1:exon

EFV83_RS00035
type: Gene
subclass of: SO_0000704
RO_0002162: 36809
gene: merH
locus tag: EFV83_RS00035
old locus tag: EFV83_00035
so part of: sequence
location: 3624..4136
location: region:3624-4136:1
so has part: feature:3624-4136:1:exon
subclass of: SO_0000010

66968226
type: Gene
SIO_000068: ncbigene

position:3624:1
position: 3624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4136:1
position: 4136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3624-4136:1:exon

EFV83_RS00035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36809
gene: merH
locus tag: EFV83_RS00035
old locus tag: EFV83_00035
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012390401.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Hg(2+) transporter MerH
translation: MCPPTPAIDHATTALPPRWQRWLPRAAALMAGFATLCCLGVTALVSLLTAIGATFLTTDAALRPLLIVSLVITIAGSAATWHRHRNPLPLLLTVVAAVIIFLSLNGNALFGHASAGHGGDPMGDGMGGHTAGAGMPGGVGVWIGLALLIIAQVWDIWRLRQLKRQNACAA
SIO_010081: EFV83_RS00035
subclass of: SO_0000673
so part of: EFV83_RS00035
location: 3624..4136
location: region:3624-4136:1
so has part: feature:3624-4136:1:exon

WP_130983727.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3624-4136:1:exon

EFV83_RS00040
type: Gene
subclass of: SO_0000704
RO_0002162: 36809
gene: merB
locus tag: EFV83_RS00040
old locus tag: EFV83_00040
so part of: sequence
location: 4183..4839
location: region:4183-4839:1
so has part: feature:4183-4839:1:exon
subclass of: SO_0000010

66968227
type: Gene
SIO_000068: ncbigene

position:4183:1
position: 4183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4839:1
position: 4839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4183-4839:1:exon

EFV83_RS00040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36809
gene: merB
locus tag: EFV83_RS00040
old locus tag: EFV83_00040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012296236.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: organomercurial lyase MerB
translation: MNPDIAQLAHRLNDSLGGDNPGSTPWMLRPLLDLLAHGAPVTIDQLADATATTVEQVRHALTAMSDTEYDEHGRIIGSGLTLRPTPHRFDIDGRQLYTWCALDTLIFPGILGRTAHVTSPCHSTGQPVHLTIDTHGITNVEPTTAVVSIVIPDHPASIRTAFCHHVHFFATREAAEPWLAENPAATVVSVADAYQLGRPLTQSLLKGTSPSRCTQVGR
SIO_010081: EFV83_RS00040
subclass of: SO_0000673
so part of: EFV83_RS00040
location: 4183..4839
location: region:4183-4839:1
so has part: feature:4183-4839:1:exon

WP_012296236.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4183-4839:1:exon

EFV83_RS00045
type: Gene
subclass of: SO_0000704
RO_0002162: 36809
locus tag: EFV83_RS00045
old locus tag: EFV83_00045
so part of: sequence
location: 4836..6188
location: region:4836-6188:1
so has part: feature:4836-6188:1:exon
subclass of: SO_0000010

66968228
type: Gene
SIO_000068: ncbigene

position:4836:1
position: 4836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6188:1
position: 6188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4836-6188:1:exon

EFV83_RS00045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36809
locus tag: EFV83_RS00045
old locus tag: EFV83_00045
EC number: 1.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012296237.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)/FAD-dependent oxidoreductase
translation: MTARFDVIVIGAGMAGIAAANKCGAQGWRVAIVDSLPYGGTCALRGCDPKKILRRGAEIIDASRLMRGKGIDEGQIRINWTDLMRHKRGFTDPAPANMENDLRRHGVQTLHGQARFVDAHQISVGDDVHHTERFLVATGARPRPLQFDGHEHLIDSTQFLDLEDLPPRIVFVGGGYISFEFAHIAARAGSHPIILDHGPRPLKGFDPDLVDLLIGRGVAAGVDVRASTTVTAVRATATGYQVQVNQDGTDATIDADVVVHGAGRLPELADLDLDRAGIAWSERGIRVQPHLQSTTQPGVYAAGDAADTAGPPLTPVAVIEGKVAASNMLKAASTVPDYTGIPSAVFTIPELARVGLLEAEARDQGLNIDVRYSDASTWYSSYRIGEGTAAAKILVNKDDDRIVGAHLLGPDYTEHANTIAVAIKLGLTTRQLKTTTAAYPTLGSDLGSML
SIO_010081: EFV83_RS00045
subclass of: SO_0000673
so part of: EFV83_RS00045
location: 4836..6188
location: region:4836-6188:1
so has part: feature:4836-6188:1:exon

WP_012296237.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4836-6188:1:exon

EFV83_RS00050
type: Gene
subclass of: SO_0000704
RO_0002162: 36809
locus tag: EFV83_RS00050
old locus tag: EFV83_00050
so part of: sequence
location: 6387..6971
location: region:6387-6971:1
so has part: feature:6387-6971:1:exon
subclass of: SO_0000010

66968229
type: Gene
SIO_000068: ncbigene

position:6387:1
position: 6387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6971:1
position: 6971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6387-6971:1:exon

EFV83_RS00050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36809
locus tag: EFV83_RS00050
old locus tag: EFV83_00050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012296238.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MTAILGYARVSTLGQDLDAQLAALAAQGVESGRIFTDKLSGTVNTVRPGLAALLHYAREGDTVVVTAIDRLGRSVAEVTRTIADLGERRILLRALRESVDTGTPTGRAVATIMATLAELELELGRERRAASRDSRRARQLPATKPAKLTPERQEQLRRLAGTGEPVPELAQAFGISRATAYRYLAKLSSQSGVA
SIO_010081: EFV83_RS00050
subclass of: SO_0000673
so part of: EFV83_RS00050
location: 6387..6971
location: region:6387-6971:1
so has part: feature:6387-6971:1:exon

WP_012296238.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6387-6971:1:exon

EFV83_RS00055
type: Gene
subclass of: SO_0000704
RO_0002162: 36809
locus tag: EFV83_RS00055
old locus tag: EFV83_00055
so part of: sequence
location: 7029..7619
location: region:7029-7619:1
so has part: feature:7029-7619:1:exon
subclass of: SO_0000010

66968230
type: Gene
SIO_000068: ncbigene

position:7029:1
position: 7029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7619:1
position: 7619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7029-7619:1:exon

EFV83_RS00055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36809
locus tag: EFV83_RS00055
old locus tag: EFV83_00055
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012296239.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTSKIGPWEEAITLAADWIWERSREEDLAPLLVSNAQNAASFGYADLDEIIRAGGHATPQSRSRPDRGPVLTFVPDERSLHFAMGLARGYSLAVVEGSTSLAEWAAGAAAINLLTGQVTTSQVDDDVRKDLDSVIFYGGRNGWTGADEKAQVRRFLSDHIGGGRLTPDQAAAYALSSQSVSDRGAKRLRELLSRNR
SIO_010081: EFV83_RS00055
subclass of: SO_0000673
so part of: EFV83_RS00055
location: 7029..7619
location: region:7029-7619:1
so has part: feature:7029-7619:1:exon

WP_012296239.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7029-7619:1:exon

EFV83_RS00060
type: Gene
subclass of: SO_0000704
RO_0002162: 36809
locus tag: EFV83_RS00060
old locus tag: EFV83_00060
so part of: sequence
location: 7786..8313
location: region:7786-8313:1
so has part: feature:7786-8313:1:exon
subclass of: SO_0000010

66968231
type: Gene
SIO_000068: ncbigene

position:7786:1
position: 7786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8313:1
position: 8313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7786-8313:1:exon

EFV83_RS00060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36809
locus tag: EFV83_RS00060
old locus tag: EFV83_00060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012296240.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTMGYRRPHRTGVAVAATALVIAAGAAVTSGLALVRPIAPAQHTVNVVAPPPAAHSSSETQAAKATACAAWDRAARSTALASKSSAEALEQSWTSPKSLAALATEKRTGVAAVSYLRTQLSDATPASTAIPLHEWMSANIDMLHALNMRHWDDADRQLKRGNDLTDVLTSECGLR
SIO_010081: EFV83_RS00060
subclass of: SO_0000673
so part of: EFV83_RS00060
location: 7786..8313
location: region:7786-8313:1
so has part: feature:7786-8313:1:exon

WP_012296240.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7786-8313:1:exon

EFV83_RS00065
type: Gene
subclass of: SO_0000704
RO_0002162: 36809
locus tag: EFV83_RS00065
old locus tag: EFV83_00065
so part of: sequence
location: 8313..10757
location: region:8313-10757:1
so has part: feature:8313-10757:1:exon
subclass of: SO_0000010

66968232
type: Gene
SIO_000068: ncbigene

position:10757:1
position: 10757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8313-10757:1:exon

EFV83_RS00065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36809
locus tag: EFV83_RS00065
old locus tag: EFV83_00065
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012296241.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAAVGSSAGSYGRLIVTPDMEPPDASHWDAQEQAYRASATAWDGIHQKIVTDNAAFRDAADSRGFDEAHRAGAVLAEEAKTIAEWHDKVANKCADIATVLRDTRAGQEQLIREADPKIAAAKLPGEAEALVAQYHGMARYQTEAGVTAAMAAHTSFKKSSENVRALDLLTKWGDVPAAPPAQPLDNPSPGIEQDEDPRRYTEKPKAGADAPEPVADAPTDKAGTSVTQPGVSPGADAGTGKADVGDEGLATSSPVTQPGMTPAPRPAAASPLGGGAPSMSGLGSGGGGMGSGGGIPKMPGGLGSGGMPGTGSNPLSGVGQMPGAGSGLPNAGGLPTASNAGGASPLSAFNQGAAATAGMGGGIPPAPPPAPASPSPAPSAGGHAAPAAAAPGGGVSPAAAQPGVVAPAAPASAPTGVGVGAGGGAPMMLPPGSMGPPAAAIPPPAATVPAGTVGSTNTAPAAPTSAAAGAAAGPTLIPASVVAAGQTAAAQERRESADAAAARELVSKLQHAAYLAGSPMTGWAVGVFRSPSGTEIVITTNDGAGYIPAGVFVPRSVRVLATDPLVDNDFRQLWFGWADPAQILVEYAQLRAQWGWRLVAAASTLPTPALRDAGVEHPPACTRETNPLLQPGVQVPAPVLDDMHAHRLALLWPEMYPRLLRIMDADPIYQDRIVSAVTAALIRAATSQAQPVDIPDAVRHIWEIRGGDREPTTQQWAKYNAEAQIFNGTTAMTRPAFMTGGAGHPRDYSEDLAVYRAHWLVARTAEHIGGWAARPLPLPDMCYGAVLSGDTELSDMIVRALVSVEEDLHYEAPR
SIO_010081: EFV83_RS00065
subclass of: SO_0000673
so part of: EFV83_RS00065
location: 8313..10757
location: region:8313-10757:1
so has part: feature:8313-10757:1:exon

WP_012296241.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8313-10757:1:exon

EFV83_RS00070
type: Gene
subclass of: SO_0000704
RO_0002162: 36809
locus tag: EFV83_RS00070
old locus tag: EFV83_00070
so part of: sequence
location: 10754..11515
location: region:10754-11515:1
so has part: feature:10754-11515:1:exon
subclass of: SO_0000010

66968233
type: Gene
SIO_000068: ncbigene

position:10754:1
position: 10754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11515:1
position: 11515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10754-11515:1:exon

EFV83_RS00070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36809
locus tag: EFV83_RS00070
old locus tag: EFV83_00070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012296242.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTTPEGADGAAWRVELERWHAELANTIYQASLWAREFHVRTGDRLRGDSSAPPSYPLLGYAERLETIGATLKMVCANASLNPPIPRWDRATLSAPSPIRVPGRDPDWRDADYFEGGRYLLLIRPSAPTSDIVTAQQHWRTALGFAAPSVLESHLGIPQLAVYAEQAQGLFDIAHDTIRAAFRDSVAATYGRIWATWPTSEDSERPLLMWLRELAQFGCPVDECEAVLRDIEAVDPQAVARCREAGAWWRLDAG
SIO_010081: EFV83_RS00070
subclass of: SO_0000673
so part of: EFV83_RS00070
location: 10754..11515
location: region:10754-11515:1
so has part: feature:10754-11515:1:exon

WP_012296242.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10754-11515:1:exon

EFV83_RS00075
type: Gene
subclass of: SO_0000704
RO_0002162: 36809
locus tag: EFV83_RS00075
old locus tag: EFV83_00075
so part of: sequence
location: complement(11527..14859)
location: region:11527-14859:-1
so has part: feature:11527-14859:-1:exon
subclass of: SO_0000010

66968234
type: Gene
SIO_000068: ncbigene

position:11527:-1
position: 11527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14859:-1
position: 14859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11527-14859:-1:exon

EFV83_RS00075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36809
locus tag: EFV83_RS00075
old locus tag: EFV83_00075
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012296243.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobF family relaxase
translation: MLTIAKLGAWSVAYYVDTARSAAAAALESRAAGGGLGEYYSESETRLPVWFSAGRDTTAARGLTGAGRAGENADLDAVTRWLDDGESPCGASGRAFQKRAGVHGYDLTFCAPKSVSLMRGLGNDVTVKAVADAHAFAITEAMEYLAEHGGYTRVHNPRTGEKDLVRLPGIVAAGFQHETSRAGDPHLHTHVLVPNRQARADGRLVSLDGTSLYHEAKAAGIIYQATLRRELTRSIGVEWNDVDPHTGMADIAGADRGDLRSWSTRSTQLREWASGHLRVECDELSAAQLATAQKATRPRKPEGVAWASLRVAWADDTRTFRVDETVQQAARDARRAAGVDYAEVVRRAVSHGLRKAAFTRADLIEAIGARMPVDDADGPSPREVIERLADGVALRIGDERAAHQREGSIRYTAADLVAEERAIIEVMGRRHSAAVLPSVDTAGLSPDQARAVTAIATSERLVQPLSAPAGAGKTHSLRALRAAAHDAGKRVLVAAPTGRAVDVAVREQAGDHGATLDALLGRLERGQEVLDADTVVVVDEAGMVGTQHLRRLLERATAAGTKVVLVGDEHQLAPVAQRGGTFAQLVTDLPWAQRLSQVWRMHDHDERNASLAVRDGGPAALRRAVGWYRRHDRLHIGDQVTMADDAVAAWTADVAAGRDGLLIADRWEMADALNIRIHSERISDDAPTVAAARGHRVAAGDVVITRQNTTDIPTRTDRGADADPIRNGQRWEVLAVDPDAGRIAARRLDDRAVAVLSGDYLRQYTHLGYAVTVHAAQGVTADTCHTLLSAEAATRSIAYVGLTRGRHTNTVRLYDTRAGEADHEHADPIATGVHTARRGTPAQAATALRSVLGRDDRAATITAAAADEDRLPDQVADLRRHHRTVTARLRREHRIDRHAAHDRSAHASDRALVEVLAATHRYGTPLPSSQQRSDPVAVALSAPYVVTTLAADRYTPDLADTVRQAAAGTDRRYVQIAAAPSRPDQRRLDQFAERLTAHPPSPREVVVVEDAAAADPAHLAAVATALVPARGRLLLIDSGEPGPGRRLLDGLALPWSENARPTPDVADPALAALADSHRAAADRSWRILNPPHRDRGRERTRDQGYGLELD
SIO_010081: EFV83_RS00075
subclass of: SO_0000673
so part of: EFV83_RS00075
location: complement(11527..14859)
location: region:11527-14859:-1
so has part: feature:11527-14859:-1:exon

WP_012296243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11527-14859:-1:exon

EFV83_RS00080
type: Gene
subclass of: SO_0000704
RO_0002162: 36809
locus tag: EFV83_RS00080
old locus tag: EFV83_00080
so part of: sequence
location: complement(14853..>15203)
location: region:14853-15203:-1
so has part: feature:14853-15203:-1:exon
subclass of: SO_0000010

66968235
type: Gene
SIO_000068: ncbigene

position:14853:-1
position: 14853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15203:-1
position: 15203
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14853-15203:-1:exon

EFV83_RS00080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36809
locus tag: EFV83_RS00080
old locus tag: EFV83_00080
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: WHICTMCARLGGSAPWARSREVGGGRVGGRREGSVLTIAKLGAWSVAYYVDTARSAAAAALESRAAGGGLGEYYSESETRLGTFAQCVRGWAGARRGRAPARSVVVALAGGVRVRC
SIO_010081: EFV83_RS00080
subclass of: SO_0000673
so part of: EFV83_RS00080
location: complement(14853..>15203)
location: region:14853-15203:-1
so has part: feature:14853-15203:-1:exon

WP_235666594.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14853-15203:-1:exon