Mustela erminea mitochondrion, complete genome.
type: Entry
definition: Mustela erminea mitochondrion, complete genome.
sequence version: NC_025516.1
sequence date: 2023-04-03
sequence: sequence
division: MAM
label: NC_025516.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA927338
keyword: RefSeq
source: mitochondrion Mustela erminea (ermine)
organism: Mustela erminea
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Mustelidae; Mustelinae; Mustela.
reference: 1
reference: 2
reference: 3
comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The\nreference sequence is identical to KM091450.\n\n##Assembly-Data-START##\nAssembly Method :: CLC Genomic Workbench v. Default\nCoverage :: 150\nSequencing Technology :: Illumina\n##Assembly-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000819
sequence length: 16471
topology: circular
so has quality: SO_0000988
location: 1..16471
location: region:1-16471:1
RO_0002162: 36723

NC_025516
type: RefSeq
SIO_000068: refseq

PRJNA927338
type: BioProject
SIO_000068: bioproject

1
title: Genetic Identification of Species from Tracking Tunnels
author: Emami Khoyi, A.
author: Ross, J.G.
author: Paterson, A.M.
author: Cruickshank, R.H.
author: Morphy, E.C.
journal: Unpublished

2
title: Direct Submission
journal: Submitted (14-NOV-2014) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

3
title: Direct Submission
author: Emami Khoyi, A.
author: Ross, J.G.
author: Paterson, A.M.
author: Cruickshank, R.H.
author: Morphy, E.C.
journal: Submitted (02-JUL-2014) Centre For Wildlife Managment and Conservation, Lincoln University, Ellesmere Junction Road, Lincoln, Canterbury 7647, New Zealand

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16471:1
position: 16471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16471:1:source
so part of: sequence
organism: Mustela erminea
organelle: mitochondrion
mol type: genomic DNA

36723
type: Taxonomy
SIO_000068: taxonomy

D-loop
type: Displacement Loop
subclass of: SO_0000297
RO_0002162: 36723
so part of: sequence
location: join(15745..16471,1..307)
location: region:1-16471:1
so has part: feature:15745-16471:1:region
so has part: feature:1-307:1:region

urn:…
SIO_000300: 1
SIO_000628: feature:15745-16471:1:region

position:15745:1
position: 15745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-307:1:region

position:307:1
position: 307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 36723
product: tRNA-Phe
so part of: sequence
location: 308..376
location: region:308-376:1
so has part: feature:308-376:1:region

position:308:1
position: 308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376:1
position: 376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308-376:1:region

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 36723
product: 12S ribosomal RNA
note: s-rRNA
so part of: sequence
location: 377..1336
location: region:377-1336:1
so has part: feature:377-1336:1:region

position:377:1
position: 377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1336:1
position: 1336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377-1336:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 36723
product: tRNA-Val
so part of: sequence
location: 1337..1404
location: region:1337-1404:1
so has part: feature:1337-1404:1:region

position:1337:1
position: 1337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1404:1
position: 1404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1337-1404:1:region

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 36723
product: 16S ribosomal RNA
note: l-rRNA
so part of: sequence
location: 1404..2971
location: region:1404-2971:1
so has part: feature:1404-2971:1:region

position:2971:1
position: 2971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1404-2971:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 36723
product: tRNA-Leu
codon recognized: UUR
so part of: sequence
location: 2972..3046
location: region:2972-3046:1
so has part: feature:2972-3046:1:region

position:2972:1
position: 2972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3046:1
position: 3046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2972-3046:1:region

ND1
type: Gene
subclass of: SO_0000704
RO_0002162: 36723
gene: ND1
so part of: sequence
location: 3049..4003
location: region:3049-4003:1
so has part: feature:3049-4003:1:exon
subclass of: SO_0000010

22158210
type: Gene
SIO_000068: ncbigene

position:3049:1
position: 3049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4003:1
position: 4003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3049-4003:1:exon

ND1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36723
gene: ND1
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:4003,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 1
translation: MFMINIISLIVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSITMFVMAPILALTLALTMWIPLPMPYPLINMNLGILFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEHLWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFFGAFHTPYLPELYSINFTMKTLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHMALPIMTASVPPQT
SIO_010081: ND1
subclass of: SO_0000673
so part of: ND1
location: 3049..4003
location: region:3049-4003:1
so has part: feature:3049-4003:1:exon

YP_009104656.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3049-4003:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 36723
product: tRNA-Ile
so part of: sequence
location: 4004..4073
location: region:4004-4073:1
so has part: feature:4004-4073:1:region

position:4004:1
position: 4004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4073:1
position: 4073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4004-4073:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 36723
product: tRNA-Gln
so part of: sequence
location: complement(4071..4144)
location: region:4071-4144:-1
so has part: feature:4071-4144:-1:region

position:4071:-1
position: 4071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4144:-1
position: 4144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4071-4144:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 36723
product: tRNA-Met
so part of: sequence
location: 4146..4215
location: region:4146-4215:1
so has part: feature:4146-4215:1:region

position:4146:1
position: 4146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4215:1
position: 4215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4146-4215:1:region

ND2
type: Gene
subclass of: SO_0000704
RO_0002162: 36723
gene: ND2
so part of: sequence
location: 4216..5257
location: region:4216-5257:1
so has part: feature:4216-5257:1:exon
subclass of: SO_0000010

22158198
type: Gene
SIO_000068: ncbigene

position:4216:1
position: 4216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5257:1
position: 5257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4216-5257:1:exon

ND2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36723
gene: ND2
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:5257,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 2
translation: MKPPILTIIMFTIISGTIMVLMSSHWLTIWIGFEMNMLAIIPILMKKFSPRAVEAATKYFLTQATASMLLMLGIIMNLLLTGQWTVLNTLNPIVSNMMTMALAMKLGLSPFHFWVPEVTQGIPLSSGMILLTWQKIAPLSILYQMAPSMNPYLLMTMAFMSILTGGWGGLNQTQLRKIMAYSSIAHMGWMIAATTYNPTLMLLNLTIYITMTLGTFMLFMFNSSTTTLSLSLTWNKLPLITSLILIIMLSLGGLPPLSGFMPKWMIIHELTKNNMIIAAMLMTMTALLNLYFYMRLTYATALTMFPSTNNMKMKWQFENTKSTALLPPLIMISTMLLPLTPMMSTLF
SIO_010081: ND2
subclass of: SO_0000673
so part of: ND2
location: 4216..5257
location: region:4216-5257:1
so has part: feature:4216-5257:1:exon

YP_009104657.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4216-5257:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 36723
product: tRNA-Trp
so part of: sequence
location: 5258..5324
location: region:5258-5324:1
so has part: feature:5258-5324:1:region

position:5258:1
position: 5258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5324:1
position: 5324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5258-5324:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 36723
product: tRNA-Ala
so part of: sequence
location: 5333..5401
location: region:5333-5401:1
so has part: feature:5333-5401:1:region

position:5333:1
position: 5333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5401:1
position: 5401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5333-5401:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 36723
product: tRNA-Asn
so part of: sequence
location: 5403..5475
location: region:5403-5475:1
so has part: feature:5403-5475:1:region

position:5403:1
position: 5403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5475:1
position: 5475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5403-5475:1:region

rep_origin
type: Replication Origin
subclass of: SO_0000296
RO_0002162: 36723
so part of: sequence
location: 5476..5511
location: region:5476-5511:1
so has part: feature:5476-5511:1:region

position:5476:1
position: 5476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5511:1
position: 5511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5476-5511:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 36723
product: tRNA-Cys
so part of: sequence
location: complement(5509..5574)
location: region:5509-5574:-1
so has part: feature:5509-5574:-1:region

position:5509:-1
position: 5509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5574:-1
position: 5574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5509-5574:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 36723
product: tRNA-Tyr
so part of: sequence
location: complement(5575..5643)
location: region:5575-5643:-1
so has part: feature:5575-5643:-1:region

position:5575:-1
position: 5575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5643:-1
position: 5643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5575-5643:-1:region

COX1
type: Gene
subclass of: SO_0000704
RO_0002162: 36723
gene: COX1
so part of: sequence
location: 5645..7189
location: region:5645-7189:1
so has part: feature:5645-7189:1:exon
subclass of: SO_0000010

22158199
type: Gene
SIO_000068: ncbigene

position:5645:1
position: 5645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7189:1
position: 7189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5645-7189:1:exon

COX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36723
gene: COX1
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit I
translation: MFVNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMLGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGSINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNDTWAKIHFTIMFVGVNTTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMIFMIWEAFSSKREVLTVELTSTNIEWLHGCPPPYHTFEEPTYVLSK
SIO_010081: COX1
subclass of: SO_0000673
so part of: COX1
location: 5645..7189
location: region:5645-7189:1
so has part: feature:5645-7189:1:exon

YP_009104658.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5645-7189:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 36723
product: tRNA-Ser
codon recognized: UCN
so part of: sequence
location: complement(7186..7257)
location: region:7186-7257:-1
so has part: feature:7186-7257:-1:region

position:7186:-1
position: 7186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7257:-1
position: 7257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7186-7257:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 36723
product: tRNA-Asp
so part of: sequence
location: 7261..7327
location: region:7261-7327:1
so has part: feature:7261-7327:1:region

position:7261:1
position: 7261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7327:1
position: 7327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7261-7327:1:region

COX2
type: Gene
subclass of: SO_0000704
RO_0002162: 36723
gene: COX2
so part of: sequence
location: 7328..8011
location: region:7328-8011:1
so has part: feature:7328-8011:1:exon
subclass of: SO_0000010

22158200
type: Gene
SIO_000068: ncbigene

position:7328:1
position: 7328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8011:1
position: 8011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7328-8011:1:exon

COX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36723
gene: COX2
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit II
translation: MAYPFQMGLQDAASPIMEELLHFHDHTLMIVFLISSLVLYIISVMLTTKLTHTSTMDAQAVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEITIRMLISSEDVLHSWAIPSLGLKTDAIPGRLNQTTIMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSHFEKWSASML
SIO_010081: COX2
subclass of: SO_0000673
so part of: COX2
location: 7328..8011
location: region:7328-8011:1
so has part: feature:7328-8011:1:exon

YP_009104659.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7328-8011:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 36723
product: tRNA-Lys
so part of: sequence
location: 8015..8081
location: region:8015-8081:1
so has part: feature:8015-8081:1:region

position:8015:1
position: 8015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8081:1
position: 8081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8015-8081:1:region

ATP8
type: Gene
subclass of: SO_0000704
RO_0002162: 36723
gene: ATP8
so part of: sequence
location: 8083..8286
location: region:8083-8286:1
so has part: feature:8083-8286:1:exon
subclass of: SO_0000010

22158201
type: Gene
SIO_000068: ncbigene

position:8083:1
position: 8083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8286:1
position: 8286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8083-8286:1:exon

ATP8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36723
gene: ATP8
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 8
translation: MPQLDTSTWFITILSMIITLFLMFQLKVSKYNFPENPEPKLVATSKSTTPWENKWTKIYFPHSLPLQ
SIO_010081: ATP8
subclass of: SO_0000673
so part of: ATP8
location: 8083..8286
location: region:8083-8286:1
so has part: feature:8083-8286:1:exon

YP_009104660.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8083-8286:1:exon

ATP6
type: Gene
subclass of: SO_0000704
RO_0002162: 36723
gene: ATP6
so part of: sequence
location: 8244..8924
location: region:8244-8924:1
so has part: feature:8244-8924:1:exon
subclass of: SO_0000010

22158202
type: Gene
SIO_000068: ncbigene

position:8244:1
position: 8244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8924:1
position: 8924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8244-8924:1:exon

ATP6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36723
gene: ATP6
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 6
translation: MNENLFSSFTTPTMMGLPIVIIITMFPGILFPSPNRLVNNRLISIQQWLVQLTSKQMLSIHNQKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSLNLGMAIPLWAGTVITGFRYKTKASLAHFLPQGTPLPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMSISTITATITFTILVLLTILEFAVALIQAYVFTLLVSLYLHDNT
SIO_010081: ATP6
subclass of: SO_0000673
so part of: ATP6
location: 8244..8924
location: region:8244-8924:1
so has part: feature:8244-8924:1:exon

YP_009104661.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8244-8924:1:exon

COX3
type: Gene
subclass of: SO_0000704
RO_0002162: 36723
gene: COX3
so part of: sequence
location: 8924..9707
location: region:8924-9707:1
so has part: feature:8924-9707:1:exon
subclass of: SO_0000010

22158203
type: Gene
SIO_000068: ncbigene

position:9707:1
position: 9707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8924-9707:1:exon

COX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36723
gene: COX3
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:9707,aa:TERM)
transl table: 2
product: cytochrome c oxidase subunit III
translation: MTHQTHSYHMVNPSPWPLTGALSALLTTSGLVMWFHYNSLSLLTLGTAANMLTMYQWWRDVVREGTFQGHHTPTVQKGLRYGMILFITSELFFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRKHMLQALFITISLGLYFTILQASEYYEAPFTISDGIYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLNYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS
SIO_010081: COX3
subclass of: SO_0000673
so part of: COX3
location: 8924..9707
location: region:8924-9707:1
so has part: feature:8924-9707:1:exon

YP_009104662.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8924-9707:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 36723
product: tRNA-Gly
so part of: sequence
location: 9708..9776
location: region:9708-9776:1
so has part: feature:9708-9776:1:region

position:9708:1
position: 9708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9776:1
position: 9776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9708-9776:1:region

ND3
type: Gene
subclass of: SO_0000704
RO_0002162: 36723
gene: ND3
so part of: sequence
location: 9777..10123
location: region:9777-10123:1
so has part: feature:9777-10123:1:exon
subclass of: SO_0000010

22158204
type: Gene
SIO_000068: ncbigene

position:9777:1
position: 9777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10123:1
position: 10123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9777-10123:1:exon

ND3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36723
gene: ND3
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:10122..10123,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 3
translation: MNMMLTMFINVSLASLLILIAFWLPQLNIYTEKASPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSNNLKTTLTMALALISLLAVSLAYEWTEEGLEWNE
SIO_010081: ND3
subclass of: SO_0000673
so part of: ND3
location: 9777..10123
location: region:9777-10123:1
so has part: feature:9777-10123:1:exon

YP_009104663.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9777-10123:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 36723
product: tRNA-Arg
so part of: sequence
location: 10124..10191
location: region:10124-10191:1
so has part: feature:10124-10191:1:region

position:10124:1
position: 10124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10191:1
position: 10191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10124-10191:1:region

ND4L
type: Gene
subclass of: SO_0000704
RO_0002162: 36723
gene: ND4L
so part of: sequence
location: 10192..10488
location: region:10192-10488:1
so has part: feature:10192-10488:1:exon
subclass of: SO_0000010

22158205
type: Gene
SIO_000068: ncbigene

position:10192:1
position: 10192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10488:1
position: 10488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10192-10488:1:exon

ND4L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36723
gene: ND4L
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 4L
translation: MSVVYINIFLAFTLSFMGLLIYRSHLMSSLLCLEGMMLSLFVMMTVTILANHFTLASMTPIILLVFAACEAALGLSLLVMISSTYGTDYVQNLNLLQC
SIO_010081: ND4L
subclass of: SO_0000673
so part of: ND4L
location: 10192..10488
location: region:10192-10488:1
so has part: feature:10192-10488:1:exon

YP_009104664.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10192-10488:1:exon

ND4
type: Gene
subclass of: SO_0000704
RO_0002162: 36723
gene: ND4
so part of: sequence
location: 10482..11859
location: region:10482-11859:1
so has part: feature:10482-11859:1:exon
subclass of: SO_0000010

22158206
type: Gene
SIO_000068: ncbigene

position:10482:1
position: 10482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11859:1
position: 11859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10482-11859:1:exon

ND4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36723
gene: ND4
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:11859,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 4
translation: MLKIIIPTMMLVPLTWLSKPNMIWINTTAHGMLISLISLTYLNQFTDNNLNLSLLFFADSLSTPLLVLTTWLLPLMLMASQHHLSKETLVRKKLYITMLVMLQLFLIMTFTATELIMFYILFEATLMPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLIALLWVQNNLGTLNLLIIQYWAQPLPNSWSNTLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITILLNPLTSHMAYPFMMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIMAVLIQSPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLMGELFVVMASFSWSNITIVLMGVNITITALYSLYMLITTQRGKYTHHIKSIKPSFTRENSLMALHLLPLLLLSLNPKIILGSIY
SIO_010081: ND4
subclass of: SO_0000673
so part of: ND4
location: 10482..11859
location: region:10482-11859:1
so has part: feature:10482-11859:1:exon

YP_009104665.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10482-11859:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 36723
product: tRNA-His
so part of: sequence
location: 11860..11928
location: region:11860-11928:1
so has part: feature:11860-11928:1:region

position:11860:1
position: 11860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11928:1
position: 11928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11860-11928:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 36723
product: tRNA-Ser
codon recognized: AGY
so part of: sequence
location: 11929..11990
location: region:11929-11990:1
so has part: feature:11929-11990:1:region

position:11929:1
position: 11929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11990:1
position: 11990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11929-11990:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 36723
product: tRNA-Leu
codon recognized: CUN
so part of: sequence
location: 11991..12060
location: region:11991-12060:1
so has part: feature:11991-12060:1:region

position:11991:1
position: 11991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12060:1
position: 12060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11991-12060:1:region

ND5
type: Gene
subclass of: SO_0000704
RO_0002162: 36723
gene: ND5
so part of: sequence
location: 12052..13881
location: region:12052-13881:1
so has part: feature:12052-13881:1:exon
subclass of: SO_0000010

22158207
type: Gene
SIO_000068: ncbigene

position:12052:1
position: 12052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13881:1
position: 13881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12052-13881:1:exon

ND5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36723
gene: ND5
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 5
translation: MKVINLFTSSLLVTLLMLTLPIMTTNTSMYTNKTYPQYVKTTISYAFMISLIPTMMFLHFGQDTVISNWHWITIQTMKLSLSFKLDYFSMIFMPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMMILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDVGLILTMAWFLTNLNTWDLQQIFMTNHENLTIPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNKTIQTITLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKVLPFTTTSLIVGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLLTLVATSMTAAYSTRIMFFALLGQPRFNPIITINENNPLLINSIKRLLFGSIFAGFLISHNLAPTTTPQMTMPHYLKMMALAVTILGFILALELNLMMQGLKFKYPSSLFKFSNMLGYFPTIIHRLIPKTNLLMSQKSASTLLDMIWLEKILPKSISHFQMKSSITISSQKGLIKLYFMSFMLTLTLSLLALNFHG
SIO_010081: ND5
subclass of: SO_0000673
so part of: ND5
location: 12052..13881
location: region:12052-13881:1
so has part: feature:12052-13881:1:exon

YP_009104666.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12052-13881:1:exon

ND6
type: Gene
subclass of: SO_0000704
RO_0002162: 36723
gene: ND6
so part of: sequence
location: complement(13865..14398)
location: region:13865-14398:-1
so has part: feature:13865-14398:-1:exon
subclass of: SO_0000010

22158208
type: Gene
SIO_000068: ncbigene

position:13865:-1
position: 13865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14398:-1
position: 14398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13865-14398:-1:exon

ND6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36723
gene: ND6
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 6
translation: MMTYIVFILSVIFVVSFVGFSSKPSPIYGGLVLIISGAIGCGIVLSFGGSFLGLMVFLIYLGGMLVVFGYTTAMATEQYPEVWVSNKAVLGAFIVGLLSELLTACYILKGDDVEVEVVLKFNGAGDWVIYDTGDSGFFSEEAMGIAALYSYGTWLVIVTGWSLFMGVLVIMEVTRGN
SIO_010081: ND6
subclass of: SO_0000673
so part of: ND6
location: complement(13865..14398)
location: region:13865-14398:-1
so has part: feature:13865-14398:-1:exon

YP_009104667.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13865-14398:-1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 36723
product: tRNA-Glu
so part of: sequence
location: complement(14399..14467)
location: region:14399-14467:-1
so has part: feature:14399-14467:-1:region

position:14399:-1
position: 14399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14467:-1
position: 14467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14399-14467:-1:region

CYTB
type: Gene
subclass of: SO_0000704
RO_0002162: 36723
gene: CYTB
so part of: sequence
location: 14472..15611
location: region:14472-15611:1
so has part: feature:14472-15611:1:exon
subclass of: SO_0000010

22158209
type: Gene
SIO_000068: ncbigene

position:14472:1
position: 14472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15611:1
position: 15611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14472-15611:1:exon

CYTB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36723
gene: CYTB
codon start: 1
transl table: 2
product: cytochrome b
translation: MTNIRKTHPLTKIINNSFIDLPAPSNISAWWNFGSLLGICLIIQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFLHVGRGLYYGSYMFPEAWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIISALAAVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGALFLILTLMLLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILVLAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFITIGQLASILYFMILLVLMPIISIIENNMLKW
SIO_010081: CYTB
subclass of: SO_0000673
so part of: CYTB
location: 14472..15611
location: region:14472-15611:1
so has part: feature:14472-15611:1:exon

YP_009104668.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14472-15611:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 36723
product: tRNA-Thr
so part of: sequence
location: 15612..15679
location: region:15612-15679:1
so has part: feature:15612-15679:1:region

position:15612:1
position: 15612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15679:1
position: 15679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15612-15679:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 36723
product: tRNA-Pro
so part of: sequence
location: complement(15680..15744)
location: region:15680-15744:-1
so has part: feature:15680-15744:-1:region

position:15680:-1
position: 15680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15744:-1
position: 15744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15680-15744:-1:region