Cucurbita pepo subsp. pepo cultivar mu-cu-16 chromosome LG18, ASM280686v2, whole genome shotgun sequence.
type: Entry
definition: Cucurbita pepo subsp. pepo cultivar mu-cu-16 chromosome LG18, ASM280686v2, whole genome shotgun sequence.
sequence version: NC_036655.1
sequence date: 2018-01-22
sequence: sequence
division: CON
label: NC_036655.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA421955
dblink: SAMN07125871
keyword: WGS
keyword: RefSeq
source: Cucurbita pepo subsp. pepo (vegetable marrow)
organism: Cucurbita pepo subsp. pepo
taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita.
reference: 1
references: 29112324
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM008935.1.\nAssembly name: ASM280686v2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Comav-UPV on 2017/12/07. The\noriginal whole-genome shotgun project has the accession\nNHTM00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Comav-UPV\nAssembly Method :: SOAPdenovo v. r240; BreakScaffolds v.\n git; SSPADE v. 3.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 198.0x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Cucurbita pepo subsp. pepo\n Annotation Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 8333454
topology: linear
so has quality: SO_0000987
location: 1..8333454
location: region:1-8333454:1
RO_0002162: 3664

NC_036655
type: RefSeq
SIO_000068: refseq

PRJNA421955
type: BioProject
SIO_000068: bioproject

SAMN07125871
type: BioSample
SIO_000068: biosample

1
title: De novo assembly of the zucchini genome reveals a whole-genome duplication associated with the origin of the Cucurbita genus
author: Montero-Pau, J.
author: Blanca, J.
author: Bombarely, A.
author: Ziarsolo, P.
author: Esteras, C.
author: Marti-Gomez, C.
author: Ferriol, M.
author: Gomez, P.
author: Jamilena, M.
author: Mueller, L.
author: Pico, B.
author: Canizares, J.
journal: Plant Biotechnol. J. (2017)
pubmed: 29112324

29112324
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8333454:1
position: 8333454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-8333454:1:source
so part of: sequence
organism: Cucurbita pepo subsp. pepo
mol type: genomic DNA
cultivar: mu-cu-16
sub species: pepo
chromosome: LG18
tissue type: young leaf
dev stage: seedling
country: Spain: Murcia

3664
type: Taxonomy
SIO_000068: taxonomy

LOC111780394
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780394
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2719..3156)
location: region:2719-3156:-1
so has part: feature:2719-3156:-1:exon
subclass of: SO_0000011

111780394
type: Gene
SIO_000068: ncbigene

position:2719:-1
position: 2719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3156:-1
position: 3156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2719-3156:-1:exon

LOC111780394
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3664
nc RNA class: lncRNA
gene: LOC111780394
product: uncharacterized LOC111780394
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XR_002812849.1
SIO_010081: LOC111780394
subclass of: SO_0000673
so part of: LOC111780394
location: complement(join(2719..2847,2929..3156))
location: region:2719-3156:-1
so has part: feature:2929-3156:-1:exon
so has part: feature:2719-2847:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2929-3156:-1:exon

position:2929:-1
position: 2929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2719-2847:-1:exon

position:2847:-1
position: 2847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111780534
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780534
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4579..5584)
location: region:4579-5584:-1
so has part: feature:4579-5584:-1:exon
subclass of: SO_0000011

111780534
type: Gene
SIO_000068: ncbigene

position:4579:-1
position: 4579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5584:-1
position: 5584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4579-5584:-1:exon

LOC111780534
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3664
nc RNA class: lncRNA
gene: LOC111780534
product: uncharacterized LOC111780534, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_002812857.1
SIO_010081: LOC111780534
subclass of: SO_0000673
so part of: LOC111780534
location: complement(join(4579..5041,5410..5584))
location: region:4579-5584:-1
so has part: feature:5410-5584:-1:exon
so has part: feature:4579-5041:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5410-5584:-1:exon

position:5410:-1
position: 5410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4579-5041:-1:exon

position:5041:-1
position: 5041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111780534
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3664
nc RNA class: lncRNA
gene: LOC111780534
product: uncharacterized LOC111780534, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_002812856.1
SIO_010081: LOC111780534
subclass of: SO_0000673
so part of: LOC111780534
location: complement(join(4579..5041,5206..5329,5410..5584))
location: region:4579-5584:-1
so has part: feature:5410-5584:-1:exon
so has part: feature:5206-5329:-1:exon
so has part: feature:4579-5041:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5410-5584:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5206-5329:-1:exon

position:5206:-1
position: 5206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5329:-1
position: 5329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4579-5041:-1:exon

LOC111780648
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780648
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 30665..34165
location: region:30665-34165:1
so has part: feature:30665-34165:1:exon
subclass of: SO_0000010

111780648
type: Gene
SIO_000068: ncbigene

position:30665:1
position: 30665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34165:1
position: 34165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30665-34165:1:exon

LOC111780648
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111780648
product: G patch domain-containing protein 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_023661109.1
SIO_010081: LOC111780648
subclass of: SO_0000673
so part of: LOC111780648
location: join(30665..30779,31385..31463,31626..31812,32397..32551,32804..32947,33062..33165,33292..33451,33848..34165)
location: region:30665-34165:1
so has part: feature:30665-30779:1:exon
so has part: feature:31385-31463:1:exon
so has part: feature:31626-31812:1:exon
so has part: feature:32397-32551:1:exon
so has part: feature:32804-32947:1:exon
so has part: feature:33062-33165:1:exon
so has part: feature:33292-33451:1:exon
so has part: feature:33848-34165:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30665-30779:1:exon

position:30779:1
position: 30779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:31385-31463:1:exon

position:31385:1
position: 31385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31463:1
position: 31463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:31626-31812:1:exon

position:31626:1
position: 31626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31812:1
position: 31812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:32397-32551:1:exon

position:32397:1
position: 32397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32551:1
position: 32551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:32804-32947:1:exon

position:32804:1
position: 32804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32947:1
position: 32947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:33062-33165:1:exon

position:33062:1
position: 33062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33165:1
position: 33165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:33292-33451:1:exon

position:33292:1
position: 33292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33451:1
position: 33451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:33848-34165:1:exon

position:33848:1
position: 33848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111780648
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111780648
product: G patch domain-containing protein 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_023661110.1
SIO_010081: LOC111780648
subclass of: SO_0000673
so part of: LOC111780648
location: join(30665..30779,31385..31463,31626..31812,32397..32551,32804..32947,33062..33165,33292..33451,33851..34165)
location: region:30665-34165:1
so has part: feature:30665-30779:1:exon
so has part: feature:31385-31463:1:exon
so has part: feature:31626-31812:1:exon
so has part: feature:32397-32551:1:exon
so has part: feature:32804-32947:1:exon
so has part: feature:33062-33165:1:exon
so has part: feature:33292-33451:1:exon
so has part: feature:33851-34165:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30665-30779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:31385-31463:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:31626-31812:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:32397-32551:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:32804-32947:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:33062-33165:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:33292-33451:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:33851-34165:1:exon

position:33851:1
position: 33851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111780648
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111780648
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G patch domain-containing protein 8 isoform X1
translation: MDKRSYSSRLETNNPNKAYAKEQDSLGDDFIDDFRLPINHRPTENVDLDNVEQASLDTQLTSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRKKLDVEMEETEADVKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKEMREMHGSSSRDDRNKREQQREEREMAKFAQIADARKKEQQMLEQQERSAKAPASTEIRNATSLADQDQRKTLKFGFSSKGGTSKKIFGGATKKPKVVAPVASVFGNDSDEE
SIO_010081: LOC111780648
subclass of: SO_0000673
so part of: LOC111780648
location: join(31395..31463,31626..31812,32397..32551,32804..32947,33062..33165,33292..33451,33848..33931)
location: region:31395-33931:1
so has part: feature:31395-31463:1:exon
so has part: feature:31626-31812:1:exon
so has part: feature:32397-32551:1:exon
so has part: feature:32804-32947:1:exon
so has part: feature:33062-33165:1:exon
so has part: feature:33292-33451:1:exon
so has part: feature:33848-33931:1:exon

XP_023516877.1
type: Protein
SIO_000068: ncbiprotein

position:31395:1
position: 31395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33931:1
position: 33931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31395-31463:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:31626-31812:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:32397-32551:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:32804-32947:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:33062-33165:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:33292-33451:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:33848-33931:1:exon

LOC111780648
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111780648
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G patch domain-containing protein 8 isoform X2
translation: MDKRSYSSRLETNNPNKAYAKEQDSLGDDFIDDFRLPINHRPTENVDLDNVEQASLDTQLTSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRKKLDVEMEETEADVKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKEMREMHGSSSRDDRNKREQQREEREMAKFAQIADARKKEQQMLEQQERSAKAPASTEIRNATSLADQDQRKTLKFGFSSKGGTSKIFGGATKKPKVVAPVASVFGNDSDEE
SIO_010081: LOC111780648
subclass of: SO_0000673
so part of: LOC111780648
location: join(31395..31463,31626..31812,32397..32551,32804..32947,33062..33165,33292..33451,33851..33931)
location: region:31395-33931:1
so has part: feature:31395-31463:1:exon
so has part: feature:31626-31812:1:exon
so has part: feature:32397-32551:1:exon
so has part: feature:32804-32947:1:exon
so has part: feature:33062-33165:1:exon
so has part: feature:33292-33451:1:exon
so has part: feature:33851-33931:1:exon

XP_023516878.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31395-31463:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:31626-31812:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:32397-32551:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:32804-32947:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:33062-33165:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:33292-33451:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:33851-33931:1:exon

LOC111779938
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111779938
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <35693..37214
location: region:35693-37214:1
so has part: feature:35693-37214:1:exon
subclass of: SO_0000010

111779938
type: Gene
SIO_000068: ncbigene

position:35693:1
position: 35693
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:37214:1
position: 37214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35693-37214:1:exon

LOC111779938
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111779938
product: uncharacterized LOC111779938
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_023660142.1
SIO_010081: LOC111779938
subclass of: SO_0000673
so part of: LOC111779938
location: join(<35693..35823,36119..37214)
location: region:35693-37214:1
so has part: feature:35693-35823:1:exon
so has part: feature:36119-37214:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35693-35823:1:exon

position:35823:1
position: 35823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:36119-37214:1:exon

position:36119:1
position: 36119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111779938
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111779938
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111779938
translation: LGFFFCSLDESLSSSSSSSNQSADGVWELRLSRSVDSSSCSFTRKTAVVLLCAAKIASASMGKAVIVARADAERKVREVAVARKRAREALEHVGFLLARERARRKEEASMEVSGSGNMEMKDKERNRNLGSMVKTENSLETPAVPTLNTGTTLTQRRESLNGFVRQMSMVKNEAAASVQETAEADRLQSNNTIPSSEKEKSGNFADNGDVENVQNDHKIAL
SIO_010081: LOC111779938
subclass of: SO_0000673
so part of: LOC111779938
location: join(<35693..35823,36119..36653)
location: region:35693-36653:1
so has part: feature:35693-35823:1:exon
so has part: feature:36119-36653:1:exon

XP_023515910.1
type: Protein
SIO_000068: ncbiprotein

position:36653:1
position: 36653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35693-35823:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:36119-36653:1:exon

LOC111780005
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780005
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(38837..41131)
location: region:38837-41131:-1
so has part: feature:38837-41131:-1:exon
subclass of: SO_0000010

111780005
type: Gene
SIO_000068: ncbigene

position:38837:-1
position: 38837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41131:-1
position: 41131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38837-41131:-1:exon

LOC111780005
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111780005
product: mucin-2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_023660239.1
SIO_010081: LOC111780005
subclass of: SO_0000673
so part of: LOC111780005
location: complement(join(38837..39338,39712..39874,39954..40625,40871..41131))
location: region:38837-41131:-1
so has part: feature:40871-41131:-1:exon
so has part: feature:39954-40625:-1:exon
so has part: feature:39712-39874:-1:exon
so has part: feature:38837-39338:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:40871-41131:-1:exon

position:40871:-1
position: 40871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:39954-40625:-1:exon

position:39954:-1
position: 39954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40625:-1
position: 40625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:39712-39874:-1:exon

position:39712:-1
position: 39712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39874:-1
position: 39874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:38837-39338:-1:exon

position:39338:-1
position: 39338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111780005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111780005
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mucin-2
translation: MAQTASKCFFFSILSLLAISSSGRFGGSHLDVQENASAELEWKFSELVRTTMHDATDSPTTNFPTTPDTSTPTIITVPATNPITVTPSSPASTPVSIPLTTPITVPANSPVPLTNPVAPPVTVPGAQPITNPVTTYPAPSGGSPVVTPVTNPVPVSPPAMTNAPVIPGQSWCVARSGASEMALQSALDYACGTGADCSQIQQGGSCYNPNTLENHASFAFNSYFQKNPSPTSCDFGGSAMVTNSNPSTGSCLYPSSSSSATPASMTPSVPTPTPTTTAPITVAPTIVTNPTSSPVGTGMPENGTPPAVFNPDNPASSIGSSTGFGTEIPPSSSTSISMAAGLRPFTWCIIMTMSLITRRITLDL
SIO_010081: LOC111780005
subclass of: SO_0000673
so part of: LOC111780005
location: complement(join(39146..39338,39712..39874,39954..40625,40871..40937))
location: region:39146-40937:-1
so has part: feature:40871-40937:-1:exon
so has part: feature:39954-40625:-1:exon
so has part: feature:39712-39874:-1:exon
so has part: feature:39146-39338:-1:exon

XP_023516007.1
type: Protein
SIO_000068: ncbiprotein

position:39146:-1
position: 39146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40937:-1
position: 40937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40871-40937:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:39954-40625:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:39712-39874:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:39146-39338:-1:exon

LOC111780003
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780003
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(42912..54783)
location: region:42912-54783:-1
so has part: feature:42912-54783:-1:exon
subclass of: SO_0000010

111780003
type: Gene
SIO_000068: ncbigene

position:42912:-1
position: 42912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54783:-1
position: 54783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42912-54783:-1:exon

LOC111780003
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111780003
product: serine/threonine-protein kinase haspin homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_023660238.1
SIO_010081: LOC111780003
subclass of: SO_0000673
so part of: LOC111780003
location: complement(join(42912..43242,43809..43875,44973..45025,45137..45207,45345..45475,45557..45618,45690..45782,46143..46254,46551..46660,46949..47072,47667..48262,48461..48551,54231..54329,54426..54555,54655..54688,54719..54783))
location: region:42912-54783:-1
so has part: feature:54719-54783:-1:exon
so has part: feature:54655-54688:-1:exon
so has part: feature:54426-54555:-1:exon
so has part: feature:54231-54329:-1:exon
so has part: feature:48461-48551:-1:exon
so has part: feature:47667-48262:-1:exon
so has part: feature:46949-47072:-1:exon
so has part: feature:46551-46660:-1:exon
so has part: feature:46143-46254:-1:exon
so has part: feature:45690-45782:-1:exon
so has part: feature:45557-45618:-1:exon
so has part: feature:45345-45475:-1:exon
so has part: feature:45137-45207:-1:exon
so has part: feature:44973-45025:-1:exon
so has part: feature:43809-43875:-1:exon
so has part: feature:42912-43242:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:54719-54783:-1:exon

position:54719:-1
position: 54719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:54655-54688:-1:exon

position:54655:-1
position: 54655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54688:-1
position: 54688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:54426-54555:-1:exon

position:54426:-1
position: 54426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54555:-1
position: 54555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:54231-54329:-1:exon

position:54231:-1
position: 54231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54329:-1
position: 54329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:48461-48551:-1:exon

position:48461:-1
position: 48461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48551:-1
position: 48551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:47667-48262:-1:exon

position:47667:-1
position: 47667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48262:-1
position: 48262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:46949-47072:-1:exon

position:46949:-1
position: 46949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47072:-1
position: 47072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:46551-46660:-1:exon

position:46551:-1
position: 46551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46660:-1
position: 46660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:46143-46254:-1:exon

position:46143:-1
position: 46143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46254:-1
position: 46254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:45690-45782:-1:exon

position:45690:-1
position: 45690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45782:-1
position: 45782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:45557-45618:-1:exon

position:45557:-1
position: 45557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45618:-1
position: 45618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:45345-45475:-1:exon

position:45345:-1
position: 45345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45475:-1
position: 45475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:45137-45207:-1:exon

position:45137:-1
position: 45137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45207:-1
position: 45207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:44973-45025:-1:exon

position:44973:-1
position: 44973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45025:-1
position: 45025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:43809-43875:-1:exon

position:43809:-1
position: 43809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43875:-1
position: 43875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:42912-43242:-1:exon

position:43242:-1
position: 43242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111780003
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111780003
product: serine/threonine-protein kinase haspin homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_023660235.1
SIO_010081: LOC111780003
subclass of: SO_0000673
so part of: LOC111780003
location: complement(join(42912..43242,43809..43875,44973..45025,45137..45207,45345..45475,45557..45618,45690..45782,46143..46254,46551..46660,46949..47072,47667..48262,48461..48551,54231..54329,54426..54555,54655..54767))
location: region:42912-54767:-1
so has part: feature:54655-54767:-1:exon
so has part: feature:54426-54555:-1:exon
so has part: feature:54231-54329:-1:exon
so has part: feature:48461-48551:-1:exon
so has part: feature:47667-48262:-1:exon
so has part: feature:46949-47072:-1:exon
so has part: feature:46551-46660:-1:exon
so has part: feature:46143-46254:-1:exon
so has part: feature:45690-45782:-1:exon
so has part: feature:45557-45618:-1:exon
so has part: feature:45345-45475:-1:exon
so has part: feature:45137-45207:-1:exon
so has part: feature:44973-45025:-1:exon
so has part: feature:43809-43875:-1:exon
so has part: feature:42912-43242:-1:exon

position:54767:-1
position: 54767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54655-54767:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:54426-54555:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:54231-54329:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:48461-48551:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:47667-48262:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:46949-47072:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:46551-46660:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:46143-46254:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:45690-45782:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:45557-45618:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:45345-45475:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:45137-45207:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:44973-45025:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:43809-43875:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:42912-43242:-1:exon

LOC111780003
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111780003
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase haspin homolog
translation: MNSKPGGKGIDLWSELIASEGSEGQEEARVEEVYRRRRPSEKTVHEVPLKQNLGSNLRDVNRLSFAAVNSKRISWNRALSIRGRASIAVEACLDHQLRHKEAKKKGKPALPKGKFVQPTNFDKERAYFQEVDAFELLEESPSPKRFGTWASSQFDSAALPSLCSKIEKWLISKKSNYSLAPSSTLSKILETPLESREPIGGKHLDKFNLRTPDKSAREIDARLCSIQRRFISSLNDIDALEIDSNRDNRSTGAEDVSTEDRADLEVSVKKLSLTSTSTSFHNYNLDPFNALLAVCGQSAPSTLKDAFSNYCDPETIVKVGEGTYGEAFKAGNTVCKIVPIDGDLQVNGEVQKRSEELLEEVILSRTLNSLRNQEGGADNFCTTFIRTIDLRVCQGSYDALLIKAWEDWDEKHGSENDHPKEFPDKQCYVVFVLQHGGKDLESFVLLNFDEAQSLLVQATAALAVAEAAYEFEHRDLHWGNVLLSRNDSEALQFTLEGKNMTVQTFGLQISIIDFTLSRINTGEDILFLDLSSDPDLFKGAKGDRQSETYRKMKEVTGDCWEGSFPRTNVLWLLYLVHILLLKKSFERSSKHERELRAFKKRLDKYNSAKEAIFDPFFNELIVWSSSVE
SIO_010081: LOC111780003
subclass of: SO_0000673
so part of: LOC111780003
location: complement(join(43111..43242,43809..43875,44973..45025,45137..45207,45345..45475,45557..45618,45690..45782,46143..46254,46551..46660,46949..47072,47667..48262,48461..48551,54231..54329,54426..54555,54655..54670))
location: region:43111-54670:-1
so has part: feature:54655-54670:-1:exon
so has part: feature:54426-54555:-1:exon
so has part: feature:54231-54329:-1:exon
so has part: feature:48461-48551:-1:exon
so has part: feature:47667-48262:-1:exon
so has part: feature:46949-47072:-1:exon
so has part: feature:46551-46660:-1:exon
so has part: feature:46143-46254:-1:exon
so has part: feature:45690-45782:-1:exon
so has part: feature:45557-45618:-1:exon
so has part: feature:45345-45475:-1:exon
so has part: feature:45137-45207:-1:exon
so has part: feature:44973-45025:-1:exon
so has part: feature:43809-43875:-1:exon
so has part: feature:43111-43242:-1:exon

XP_023516003.1
type: Protein
SIO_000068: ncbiprotein

position:43111:-1
position: 43111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54670:-1
position: 54670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54655-54670:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:54426-54555:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:54231-54329:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:48461-48551:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:47667-48262:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:46949-47072:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:46551-46660:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:46143-46254:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:45690-45782:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:45557-45618:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:45345-45475:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:45137-45207:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:44973-45025:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:43809-43875:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:43111-43242:-1:exon

LOC111780003
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111780003
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase haspin homolog
translation: MNSKPGGKGIDLWSELIASEGSEGQEEARVEEVYRRRRPSEKTVHEVPLKQNLGSNLRDVNRLSFAAVNSKRISWNRALSIRGRASIAVEACLDHQLRHKEAKKKGKPALPKGKFVQPTNFDKERAYFQEVDAFELLEESPSPKRFGTWASSQFDSAALPSLCSKIEKWLISKKSNYSLAPSSTLSKILETPLESREPIGGKHLDKFNLRTPDKSAREIDARLCSIQRRFISSLNDIDALEIDSNRDNRSTGAEDVSTEDRADLEVSVKKLSLTSTSTSFHNYNLDPFNALLAVCGQSAPSTLKDAFSNYCDPETIVKVGEGTYGEAFKAGNTVCKIVPIDGDLQVNGEVQKRSEELLEEVILSRTLNSLRNQEGGADNFCTTFIRTIDLRVCQGSYDALLIKAWEDWDEKHGSENDHPKEFPDKQCYVVFVLQHGGKDLESFVLLNFDEAQSLLVQATAALAVAEAAYEFEHRDLHWGNVLLSRNDSEALQFTLEGKNMTVQTFGLQISIIDFTLSRINTGEDILFLDLSSDPDLFKGAKGDRQSETYRKMKEVTGDCWEGSFPRTNVLWLLYLVHILLLKKSFERSSKHERELRAFKKRLDKYNSAKEAIFDPFFNELIVWSSSVE
SIO_010081: LOC111780003
subclass of: SO_0000673
so part of: LOC111780003
location: complement(join(43111..43242,43809..43875,44973..45025,45137..45207,45345..45475,45557..45618,45690..45782,46143..46254,46551..46660,46949..47072,47667..48262,48461..48551,54231..54329,54426..54555,54655..54670))
location: region:43111-54670:-1
so has part: feature:54655-54670:-1:exon
so has part: feature:54426-54555:-1:exon
so has part: feature:54231-54329:-1:exon
so has part: feature:48461-48551:-1:exon
so has part: feature:47667-48262:-1:exon
so has part: feature:46949-47072:-1:exon
so has part: feature:46551-46660:-1:exon
so has part: feature:46143-46254:-1:exon
so has part: feature:45690-45782:-1:exon
so has part: feature:45557-45618:-1:exon
so has part: feature:45345-45475:-1:exon
so has part: feature:45137-45207:-1:exon
so has part: feature:44973-45025:-1:exon
so has part: feature:43809-43875:-1:exon
so has part: feature:43111-43242:-1:exon

XP_023516006.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54655-54670:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:54426-54555:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:54231-54329:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:48461-48551:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:47667-48262:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:46949-47072:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:46551-46660:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:46143-46254:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:45690-45782:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:45557-45618:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:45345-45475:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:45137-45207:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:44973-45025:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:43809-43875:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:43111-43242:-1:exon

LOC111780757
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780757
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 58204..58343
location: region:58204-58343:1
so has part: feature:58204-58343:1:exon
subclass of: SO_0000578

111780757
type: Gene
SIO_000068: ncbigene

position:58204:1
position: 58204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58343:1
position: 58343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58204-58343:1:exon

LOC111780757
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3664
nc RNA class: snoRNA
gene: LOC111780757
product: small nucleolar RNA Z247
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00321
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_002812901.1
SIO_010081: LOC111780757
subclass of: SO_0000673
so part of: LOC111780757
location: 58204..58343
location: region:58204-58343:1
so has part: feature:58204-58343:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:58204-58343:1:exon

TRNAI-UAU
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAI-UAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 119135..119208
location: region:119135-119208:1
so has part: feature:119135-119208:1:exon
subclass of: SO_0000663

111780769
type: Gene
SIO_000068: ncbigene

position:119135:1
position: 119135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119208:1
position: 119208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119135-119208:1:exon

TRNAI-UAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAI-UAU
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA isoleucine (anticodon UAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:119169..119171,aa:Ile,seq:tat)
SIO_010081: TRNAI-UAU
subclass of: SO_0000673
so part of: TRNAI-UAU
location: 119135..119208
location: region:119135-119208:1
so has part: feature:119135-119208:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:119135-119208:1:exon

LOC111780398
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780398
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(120004..125631)
location: region:120004-125631:-1
so has part: feature:120004-125631:-1:exon
subclass of: SO_0000010

111780398
type: Gene
SIO_000068: ncbigene

position:120004:-1
position: 120004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125631:-1
position: 125631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120004-125631:-1:exon

LOC111780398
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111780398
product: ATP-citrate synthase alpha chain protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_023660780.1
SIO_010081: LOC111780398
subclass of: SO_0000673
so part of: LOC111780398
location: complement(join(120004..120374,120712..120828,120916..121032,121138..121239,121332..121427,121803..121884,122066..122180,122529..122580,124204..124284,124384..124429,124514..124629,124712..124888,125416..125631))
location: region:120004-125631:-1
so has part: feature:125416-125631:-1:exon
so has part: feature:124712-124888:-1:exon
so has part: feature:124514-124629:-1:exon
so has part: feature:124384-124429:-1:exon
so has part: feature:124204-124284:-1:exon
so has part: feature:122529-122580:-1:exon
so has part: feature:122066-122180:-1:exon
so has part: feature:121803-121884:-1:exon
so has part: feature:121332-121427:-1:exon
so has part: feature:121138-121239:-1:exon
so has part: feature:120916-121032:-1:exon
so has part: feature:120712-120828:-1:exon
so has part: feature:120004-120374:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:125416-125631:-1:exon

position:125416:-1
position: 125416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:124712-124888:-1:exon

position:124712:-1
position: 124712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124888:-1
position: 124888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:124514-124629:-1:exon

position:124514:-1
position: 124514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124629:-1
position: 124629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:124384-124429:-1:exon

position:124384:-1
position: 124384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124429:-1
position: 124429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:124204-124284:-1:exon

position:124204:-1
position: 124204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124284:-1
position: 124284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:122529-122580:-1:exon

position:122529:-1
position: 122529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122580:-1
position: 122580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:122066-122180:-1:exon

position:122066:-1
position: 122066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122180:-1
position: 122180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:121803-121884:-1:exon

position:121803:-1
position: 121803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121884:-1
position: 121884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:121332-121427:-1:exon

position:121332:-1
position: 121332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121427:-1
position: 121427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:121138-121239:-1:exon

position:121138:-1
position: 121138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121239:-1
position: 121239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:120916-121032:-1:exon

position:120916:-1
position: 120916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121032:-1
position: 121032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:120712-120828:-1:exon

position:120712:-1
position: 120712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120828:-1
position: 120828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:120004-120374:-1:exon

position:120374:-1
position: 120374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111780398
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111780398
product: ATP-citrate synthase alpha chain protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_023660781.1
SIO_010081: LOC111780398
subclass of: SO_0000673
so part of: LOC111780398
location: complement(join(120004..120374,120712..120828,120916..121032,121138..121239,121332..121427,121803..121884,122066..122180,122529..122580,124204..124286,124470..124629,124712..124888,125416..125631))
location: region:120004-125631:-1
so has part: feature:125416-125631:-1:exon
so has part: feature:124712-124888:-1:exon
so has part: feature:124470-124629:-1:exon
so has part: feature:124204-124286:-1:exon
so has part: feature:122529-122580:-1:exon
so has part: feature:122066-122180:-1:exon
so has part: feature:121803-121884:-1:exon
so has part: feature:121332-121427:-1:exon
so has part: feature:121138-121239:-1:exon
so has part: feature:120916-121032:-1:exon
so has part: feature:120712-120828:-1:exon
so has part: feature:120004-120374:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:125416-125631:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:124712-124888:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:124470-124629:-1:exon

position:124470:-1
position: 124470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:124204-124286:-1:exon

position:124286:-1
position: 124286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:122529-122580:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:122066-122180:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:121803-121884:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:121332-121427:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:121138-121239:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:120916-121032:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:120712-120828:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:120004-120374:-1:exon

LOC111780398
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111780398
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-citrate synthase alpha chain protein 2 isoform X1
translation: MARKKIREYDSKRLLKEHLKRLVNIDLQICSAQVNQSTDFAELTNNEPWLSSTRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKTRLGVQVEMGGCKAPITTFIVEPFVPHDQEYYLSIVSERLGCTISFSECGGIEIEENWDKVKTIFLPTEKPLTPEACAPLIATLPLEIRGKIGDFIMGVFSVFQDLDFTFLEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWGNVEFPLPFGRVLNPTESFVHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATSDPDGRKRALLIGGGIANFTDVAATFNGIIRALREKETKLKAARMHIYVRRGGPNYQTGLAKMRVLGEELGVPLEVFGPEATMTGICKQAIECIMSAA
SIO_010081: LOC111780398
subclass of: SO_0000673
so part of: LOC111780398
location: complement(join(120303..120374,120712..120828,120916..121032,121138..121239,121332..121427,121803..121884,122066..122180,122529..122580,124204..124284,124384..124429,124514..124629,124712..124888,125416..125514))
location: region:120303-125514:-1
so has part: feature:125416-125514:-1:exon
so has part: feature:124712-124888:-1:exon
so has part: feature:124514-124629:-1:exon
so has part: feature:124384-124429:-1:exon
so has part: feature:124204-124284:-1:exon
so has part: feature:122529-122580:-1:exon
so has part: feature:122066-122180:-1:exon
so has part: feature:121803-121884:-1:exon
so has part: feature:121332-121427:-1:exon
so has part: feature:121138-121239:-1:exon
so has part: feature:120916-121032:-1:exon
so has part: feature:120712-120828:-1:exon
so has part: feature:120303-120374:-1:exon

XP_023516548.1
type: Protein
SIO_000068: ncbiprotein

position:120303:-1
position: 120303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125514:-1
position: 125514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125416-125514:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:124712-124888:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:124514-124629:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:124384-124429:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:124204-124284:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:122529-122580:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:122066-122180:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:121803-121884:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:121332-121427:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:121138-121239:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:120916-121032:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:120712-120828:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:120303-120374:-1:exon

LOC111780398
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111780398
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-citrate synthase alpha chain protein 2 isoform X2
translation: MARKKIREYDSKRLLKEHLKRLVNIDLQICSAQVNQSTDFAELTNNEPWLSSTRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKTRLGVQVEMGGCKAPITTFIVEPFVPHDQEYYLSIVSERLGCTISFSECGGIEIEENWDKVKTIFLPTEKPLTPEACAPLIATLPLEIRGKIGDFIMGVFSVFQDLDFTFLEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWGNVEFPLPFGRVLNPTESFVHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATSDPDGRKRALLIGGGIANFTDVAATFNGIIRALREKETKLKAARMHIYVRRGGPNYQTGLAKMRVLGEELGVPLEVFGPEATMTGICKQAIECIMSAA
SIO_010081: LOC111780398
subclass of: SO_0000673
so part of: LOC111780398
location: complement(join(120303..120374,120712..120828,120916..121032,121138..121239,121332..121427,121803..121884,122066..122180,122529..122580,124204..124286,124470..124629,124712..124888,125416..125514))
location: region:120303-125514:-1
so has part: feature:125416-125514:-1:exon
so has part: feature:124712-124888:-1:exon
so has part: feature:124470-124629:-1:exon
so has part: feature:124204-124286:-1:exon
so has part: feature:122529-122580:-1:exon
so has part: feature:122066-122180:-1:exon
so has part: feature:121803-121884:-1:exon
so has part: feature:121332-121427:-1:exon
so has part: feature:121138-121239:-1:exon
so has part: feature:120916-121032:-1:exon
so has part: feature:120712-120828:-1:exon
so has part: feature:120303-120374:-1:exon

XP_023516549.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:125416-125514:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:124712-124888:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:124470-124629:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:124204-124286:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:122529-122580:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:122066-122180:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:121803-121884:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:121332-121427:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:121138-121239:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:120916-121032:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:120712-120828:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:120303-120374:-1:exon

LOC111779795
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111779795
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 130267..144986
location: region:130267-144986:1
so has part: feature:130267-144986:1:exon
subclass of: SO_0000010

111779795
type: Gene
SIO_000068: ncbigene

position:130267:1
position: 130267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144986:1
position: 144986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130267-144986:1:exon

LOC111779795
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111779795
product: protein transport protein Sec24-like At3g07100
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023659947.1
SIO_010081: LOC111779795
subclass of: SO_0000673
so part of: LOC111779795
location: join(130267..130407,130771..131858,131931..132069,133224..133414,134764..134871,134949..135152,135361..135592,136320..136469,136567..136723,137455..137582,137705..138027,138114..138305,138984..139223,144641..144986)
location: region:130267-144986:1
so has part: feature:130267-130407:1:exon
so has part: feature:130771-131858:1:exon
so has part: feature:131931-132069:1:exon
so has part: feature:133224-133414:1:exon
so has part: feature:134764-134871:1:exon
so has part: feature:134949-135152:1:exon
so has part: feature:135361-135592:1:exon
so has part: feature:136320-136469:1:exon
so has part: feature:136567-136723:1:exon
so has part: feature:137455-137582:1:exon
so has part: feature:137705-138027:1:exon
so has part: feature:138114-138305:1:exon
so has part: feature:138984-139223:1:exon
so has part: feature:144641-144986:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:130267-130407:1:exon

position:130407:1
position: 130407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:130771-131858:1:exon

position:130771:1
position: 130771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131858:1
position: 131858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:131931-132069:1:exon

position:131931:1
position: 131931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132069:1
position: 132069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:133224-133414:1:exon

position:133224:1
position: 133224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133414:1
position: 133414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:134764-134871:1:exon

position:134764:1
position: 134764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134871:1
position: 134871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:134949-135152:1:exon

position:134949:1
position: 134949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135152:1
position: 135152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:135361-135592:1:exon

position:135361:1
position: 135361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135592:1
position: 135592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:136320-136469:1:exon

position:136320:1
position: 136320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136469:1
position: 136469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:136567-136723:1:exon

position:136567:1
position: 136567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136723:1
position: 136723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:137455-137582:1:exon

position:137455:1
position: 137455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137582:1
position: 137582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:137705-138027:1:exon

position:137705:1
position: 137705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138027:1
position: 138027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:138114-138305:1:exon

position:138114:1
position: 138114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138305:1
position: 138305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:138984-139223:1:exon

position:138984:1
position: 138984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139223:1
position: 139223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:144641-144986:1:exon

position:144641:1
position: 144641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111779795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111779795
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein transport protein Sec24-like At3g07100
translation: MGTENPAQQSFPARPAGTPFTATQTTSPFSSSGPVVGSDATRFRPASPAMPPYTMPFPPSSAPAVGSGVPGFRPMQPSRFSDPSVPPPPTSSVPGTTESFQRFPAPQFTSPSQPPPSRIPPMGQTPAAYAPPPPVSYHPHTQIPSVPMGSPPQSLGPPPAHVQQPMSDPSFPSAKPNFPPSLPGYVHKQPNADLQSQPPLVSHPGQYVPPSAPASPFLSHQGGYVPPPAAAASQGLLSTDQKHYPGTGPPLGSIQGLAEDFNSLSIGSIPGSIEAGVDPKALPRPLNSDEEPKFVSEMYPMNCDQRYLRFTTSAIPSSQSLVSRWHLPLGAIVCPLAEAPIGEEVPVVNFASTGVIRCRRCRTYVNPYATFTDAGRKWRCNICSLLNDVPGDYFAHLDGTGQRIDLDQRPELTKGSVDFVAPTEYMVRPPMPPLYFFLIDVSISAVRSGMLEVVAQTIRSCLDELPGSTRTQIGFATFDSTIHFYNMKSTLTQPQMMVVSDLDDVFVPLPDDLLVNLSESRTVVESFLDSLPSMFQDNVNVESAFGPALKGAFMVMSQLGGKLLIFQNTLPSLGVGRLKLRGDDLRVYGTDKEHLLRLPEDPFYKQMAAEFTKFQIGVNVYAFSDKYTDIASLGTLAKYTGGQVYYYPGFQSSNHGEKLRHELARDLTRETAWEAVMRIRCGKGIRFTSFHGNFMLRSTDLLALPSVDCDKAFAMQISYEETLLTTQTVYFQVALLYTASCGERRIRVHTAAAPVVTDLGEMYRQADVGAIFSLFSRLAIEKTLSHKLDDARTSVQQRIVKALREYRNLYAVQHRLGGRMIYPESLKFLPLYGLALCKSIPLRGGYADAVLDERCALGLAMMILPVKNLLKLLYPSLIRLDEYLLKASPAQTINLNSIEKRLPLTADSLDSRGLYLYDDGFRFIVWFGRVLSPDVSMNLLGADFAAELSKVILRDHDNVMSRKLFETLQKLRESDASYYQLSHLVRQGEQPREGFLLLANLVEDQVGGTNSYVDWLLQLHRQVQQNA
SIO_010081: LOC111779795
subclass of: SO_0000673
so part of: LOC111779795
location: join(130833..131858,131931..132069,133224..133414,134764..134871,134949..135152,135361..135592,136320..136469,136567..136723,137455..137582,137705..138027,138114..138305,138984..139217)
location: region:130833-139217:1
so has part: feature:130833-131858:1:exon
so has part: feature:131931-132069:1:exon
so has part: feature:133224-133414:1:exon
so has part: feature:134764-134871:1:exon
so has part: feature:134949-135152:1:exon
so has part: feature:135361-135592:1:exon
so has part: feature:136320-136469:1:exon
so has part: feature:136567-136723:1:exon
so has part: feature:137455-137582:1:exon
so has part: feature:137705-138027:1:exon
so has part: feature:138114-138305:1:exon
so has part: feature:138984-139217:1:exon

XP_023515715.1
type: Protein
SIO_000068: ncbiprotein

position:130833:1
position: 130833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139217:1
position: 139217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130833-131858:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131931-132069:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133224-133414:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:134764-134871:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:134949-135152:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:135361-135592:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:136320-136469:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:136567-136723:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:137455-137582:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:137705-138027:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:138114-138305:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:138984-139217:1:exon

LOC111780460
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780460
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 150795..153593
location: region:150795-153593:1
so has part: feature:150795-153593:1:exon
subclass of: SO_0000010

111780460
type: Gene
SIO_000068: ncbigene

position:150795:1
position: 150795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153593:1
position: 153593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150795-153593:1:exon

LOC111780460
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111780460
product: shaggy-related protein kinase alpha-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_023660882.1
SIO_010081: LOC111780460
subclass of: SO_0000673
so part of: LOC111780460
location: join(150795..150972,151794..151969,152093..152185,152486..152545,152675..152947,153108..153182,153277..153333,153423..153593)
location: region:150795-153593:1
so has part: feature:150795-150972:1:exon
so has part: feature:151794-151969:1:exon
so has part: feature:152093-152185:1:exon
so has part: feature:152486-152545:1:exon
so has part: feature:152675-152947:1:exon
so has part: feature:153108-153182:1:exon
so has part: feature:153277-153333:1:exon
so has part: feature:153423-153593:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:150795-150972:1:exon

position:150972:1
position: 150972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:151794-151969:1:exon

position:151794:1
position: 151794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151969:1
position: 151969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:152093-152185:1:exon

position:152093:1
position: 152093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152185:1
position: 152185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:152486-152545:1:exon

position:152486:1
position: 152486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152545:1
position: 152545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:152675-152947:1:exon

position:152675:1
position: 152675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152947:1
position: 152947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:153108-153182:1:exon

position:153108:1
position: 153108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153182:1
position: 153182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:153277-153333:1:exon

position:153277:1
position: 153277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153333:1
position: 153333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:153423-153593:1:exon

position:153423:1
position: 153423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111780460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111780460
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: shaggy-related protein kinase alpha-like
translation: MASMGVVSTSSLREPAGHNAAGVDRLPEEMNDMKIRDDKEVEATVVDGNGTETGHIIVTTIGGRNGYPKQTISYMAERAVGHGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVALKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHYNKLNQRMPLIYVKLYMYQIFRALSYIHRCIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTSAIDIWSAGCVLAELLLGQVVDCVCLRF
SIO_010081: LOC111780460
subclass of: SO_0000673
so part of: LOC111780460
location: join(151853..151969,152093..152185,152486..152545,152675..152947,153108..153182,153277..153333,153423..153593)
location: region:151853-153593:1
so has part: feature:151853-151969:1:exon
so has part: feature:152093-152185:1:exon
so has part: feature:152486-152545:1:exon
so has part: feature:152675-152947:1:exon
so has part: feature:153108-153182:1:exon
so has part: feature:153277-153333:1:exon
so has part: feature:153423-153593:1:exon

XP_023516650.1
type: Protein
SIO_000068: ncbiprotein

position:151853:1
position: 151853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151853-151969:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:152093-152185:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:152486-152545:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:152675-152947:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:153108-153182:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:153277-153333:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:153423-153593:1:exon

LOC111779759
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111779759
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 153640..155403
location: region:153640-155403:1
so has part: feature:153640-155403:1:exon
subclass of: SO_0000011

111779759
type: Gene
SIO_000068: ncbigene

position:153640:1
position: 153640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155403:1
position: 155403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153640-155403:1:exon

LOC111779759
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3664
nc RNA class: lncRNA
gene: LOC111779759
product: uncharacterized LOC111779759
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XR_002812732.1
SIO_010081: LOC111779759
subclass of: SO_0000673
so part of: LOC111779759
location: join(153640..153677,154741..154843,154925..155403)
location: region:153640-155403:1
so has part: feature:153640-153677:1:exon
so has part: feature:154741-154843:1:exon
so has part: feature:154925-155403:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:153640-153677:1:exon

position:153677:1
position: 153677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:154741-154843:1:exon

position:154741:1
position: 154741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154843:1
position: 154843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:154925-155403:1:exon

position:154925:1
position: 154925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111779760
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111779760
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(157672..161734)
location: region:157672-161734:-1
so has part: feature:157672-161734:-1:exon
subclass of: SO_0000010

111779760
type: Gene
SIO_000068: ncbigene

position:157672:-1
position: 157672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161734:-1
position: 161734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157672-161734:-1:exon

LOC111779760
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111779760
product: pyrrolidone-carboxylate peptidase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_023659884.1
SIO_010081: LOC111779760
subclass of: SO_0000673
so part of: LOC111779760
location: complement(join(157672..158123,159350..159397,160652..160756,160940..161235,161621..161734))
location: region:157672-161734:-1
so has part: feature:161621-161734:-1:exon
so has part: feature:160940-161235:-1:exon
so has part: feature:160652-160756:-1:exon
so has part: feature:159350-159397:-1:exon
so has part: feature:157672-158123:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:161621-161734:-1:exon

position:161621:-1
position: 161621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:160940-161235:-1:exon

position:160940:-1
position: 160940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161235:-1
position: 161235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:160652-160756:-1:exon

position:160652:-1
position: 160652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160756:-1
position: 160756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:159350-159397:-1:exon

position:159350:-1
position: 159350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159397:-1
position: 159397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:157672-158123:-1:exon

position:158123:-1
position: 158123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111779760
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111779760
product: pyrrolidone-carboxylate peptidase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_023659882.1
SIO_010081: LOC111779760
subclass of: SO_0000673
so part of: LOC111779760
location: complement(join(157672..158123,159350..159397,160652..160756,160940..161277,161621..161731))
location: region:157672-161731:-1
so has part: feature:161621-161731:-1:exon
so has part: feature:160940-161277:-1:exon
so has part: feature:160652-160756:-1:exon
so has part: feature:159350-159397:-1:exon
so has part: feature:157672-158123:-1:exon

position:161731:-1
position: 161731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161621-161731:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:160940-161277:-1:exon

position:161277:-1
position: 161277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:160652-160756:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:159350-159397:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:157672-158123:-1:exon

LOC111779760
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111779760
product: pyrrolidone-carboxylate peptidase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_023659883.1
SIO_010081: LOC111779760
subclass of: SO_0000673
so part of: LOC111779760
location: complement(join(157672..158123,160497..160544,160652..160756,160940..161277,161621..161731))
location: region:157672-161731:-1
so has part: feature:161621-161731:-1:exon
so has part: feature:160940-161277:-1:exon
so has part: feature:160652-160756:-1:exon
so has part: feature:160497-160544:-1:exon
so has part: feature:157672-158123:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:161621-161731:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:160940-161277:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:160652-160756:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:160497-160544:-1:exon

position:160497:-1
position: 160497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160544:-1
position: 160544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:157672-158123:-1:exon

LOC111779760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111779760
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111779760 isoform X1
translation: MGSEGPPSVIIHVTGFKKFHGVSENPTEAVVNNLMKYMEKNGLPEALTLGSCSILETAGRGALDALYKTLQSAVEGKGSEPTNSRRIIWLHLGVNSGASRFAIERQAFNEATFRCPDEMGWKPQKEPIVPEDGEISRTRETSLPVEEITKTLAKKGYEVMTSDDAGRFVCNYVYYHSLRYAEEHGTKSLFVHVPLFLTIDEDTQMQFIASLLEVLASSSY
SIO_010081: LOC111779760
subclass of: SO_0000673
so part of: LOC111779760
location: complement(join(157881..158123,159350..159397,160652..160756,160940..161206))
location: region:157881-161206:-1
so has part: feature:160940-161206:-1:exon
so has part: feature:160652-160756:-1:exon
so has part: feature:159350-159397:-1:exon
so has part: feature:157881-158123:-1:exon

XP_023515650.1
type: Protein
SIO_000068: ncbiprotein

position:157881:-1
position: 157881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161206:-1
position: 161206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160940-161206:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:160652-160756:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:159350-159397:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:157881-158123:-1:exon

LOC111779760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111779760
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111779760 isoform X1
translation: MGSEGPPSVIIHVTGFKKFHGVSENPTEAVVNNLMKYMEKNGLPEALTLGSCSILETAGRGALDALYKTLQSAVEGKGSEPTNSRRIIWLHLGVNSGASRFAIERQAFNEATFRCPDEMGWKPQKEPIVPEDGEISRTRETSLPVEEITKTLAKKGYEVMTSDDAGRFVCNYVYYHSLRYAEEHGTKSLFVHVPLFLTIDEDTQMQFIASLLEVLASSSY
SIO_010081: LOC111779760
subclass of: SO_0000673
so part of: LOC111779760
location: complement(join(157881..158123,159350..159397,160652..160756,160940..161206))
location: region:157881-161206:-1
so has part: feature:160940-161206:-1:exon
so has part: feature:160652-160756:-1:exon
so has part: feature:159350-159397:-1:exon
so has part: feature:157881-158123:-1:exon

XP_023515652.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160940-161206:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:160652-160756:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:159350-159397:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:157881-158123:-1:exon

LOC111779760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111779760
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111779760 isoform X2
translation: MGSEGPPSVIIHVTGFKKFHGVSENPTEAVVNNLMKYMEKNGLPEALTLGSCSILETAGRGALDALYKTLQSAVEGKGSEPTNSRRIIWLHLGVNSGASRFAIERQAFNEATFRCPDEMGWKPQKEPIVPEDGEISRTRETSLPVEEITKTLAKKGYEVMTSDDAGRFVCNYVYYHSLRYAEEHGTKSLFVHVPLFLTIDEDTQMQFIASLLEVLASSSY
SIO_010081: LOC111779760
subclass of: SO_0000673
so part of: LOC111779760
location: complement(join(157881..158123,160497..160544,160652..160756,160940..161206))
location: region:157881-161206:-1
so has part: feature:160940-161206:-1:exon
so has part: feature:160652-160756:-1:exon
so has part: feature:160497-160544:-1:exon
so has part: feature:157881-158123:-1:exon

XP_023515651.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160940-161206:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:160652-160756:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:160497-160544:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:157881-158123:-1:exon

LOC111780461
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780461
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(174103..175090)
location: region:174103-175090:-1
so has part: feature:174103-175090:-1:exon

111780461
type: Gene
SIO_000068: ncbigene

position:174103:-1
position: 174103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175090:-1
position: 175090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174103-175090:-1:exon

LOC111780461
type: Exon
subclass of: SO_0000147
RO_0002162: 3664
gene: LOC111780461
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 7% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111780461
subclass of: SO_0000673
so part of: LOC111780461
location: complement(174103..175090)
location: region:174103-175090:-1
so has part: feature:174103-175090:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:174103-175090:-1:exon

LOC111780212
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780212
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 179198..181412
location: region:179198-181412:1
so has part: feature:179198-181412:1:exon
subclass of: SO_0000011

111780212
type: Gene
SIO_000068: ncbigene

position:179198:1
position: 179198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181412:1
position: 181412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179198-181412:1:exon

LOC111780212
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3664
nc RNA class: lncRNA
gene: LOC111780212
product: uncharacterized LOC111780212
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_002812818.1
SIO_010081: LOC111780212
subclass of: SO_0000673
so part of: LOC111780212
location: join(179198..179525,179605..179686,180200..180278,181272..181412)
location: region:179198-181412:1
so has part: feature:179198-179525:1:exon
so has part: feature:179605-179686:1:exon
so has part: feature:180200-180278:1:exon
so has part: feature:181272-181412:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:179198-179525:1:exon

position:179525:1
position: 179525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:179605-179686:1:exon

position:179605:1
position: 179605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179686:1
position: 179686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:180200-180278:1:exon

position:180200:1
position: 180200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180278:1
position: 180278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:181272-181412:1:exon

position:181272:1
position: 181272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111780555
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780555
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(214777..218890)
location: region:214777-218890:-1
so has part: feature:214777-218890:-1:exon
subclass of: SO_0000010

111780555
type: Gene
SIO_000068: ncbigene

position:214777:-1
position: 214777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218890:-1
position: 218890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214777-218890:-1:exon

LOC111780555
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111780555
product: ABC transporter I family member 20
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_023660982.1
SIO_010081: LOC111780555
subclass of: SO_0000673
so part of: LOC111780555
location: complement(join(214777..215213,215305..215382,215850..216002,216081..216176,217609..217728,218314..218447,218537..218890))
location: region:214777-218890:-1
so has part: feature:218537-218890:-1:exon
so has part: feature:218314-218447:-1:exon
so has part: feature:217609-217728:-1:exon
so has part: feature:216081-216176:-1:exon
so has part: feature:215850-216002:-1:exon
so has part: feature:215305-215382:-1:exon
so has part: feature:214777-215213:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:218537-218890:-1:exon

position:218537:-1
position: 218537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:218314-218447:-1:exon

position:218314:-1
position: 218314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218447:-1
position: 218447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:217609-217728:-1:exon

position:217609:-1
position: 217609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217728:-1
position: 217728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:216081-216176:-1:exon

position:216081:-1
position: 216081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216176:-1
position: 216176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:215850-216002:-1:exon

position:215850:-1
position: 215850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216002:-1
position: 216002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:215305-215382:-1:exon

position:215305:-1
position: 215305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215382:-1
position: 215382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:214777-215213:-1:exon

position:215213:-1
position: 215213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111780555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111780555
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ABC transporter I family member 20
translation: MPTTMPGSTPTIVIDALRFTYPGIDGHPPPGSKPLIDDFSLTLNAGDRCLLVGSNGAGKTTILKILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDVAFAGFEVPIQMAVSAEKLIFGVGGVDPQRRAELINILDIDLSWTMHKVSDGQRRRVQICMGLLKAYKVLLLDEITVDLDVLARANLLKFLRRECEERGATIIYATHIFDGLEDWPSHMVYVSHGKLQISMPMDKIKEISQLSLMRTVESWLRKERDEERKKRRERKASGLPEFEERIEESRVTGDPARAAVRVMNNGWAAGRLHSTVAGEENFLLSSNRVLRQ
SIO_010081: LOC111780555
subclass of: SO_0000673
so part of: LOC111780555
location: complement(join(214974..215213,215305..215382,215850..216002,216081..216176,217609..217728,218314..218447,218537..218708))
location: region:214974-218708:-1
so has part: feature:218537-218708:-1:exon
so has part: feature:218314-218447:-1:exon
so has part: feature:217609-217728:-1:exon
so has part: feature:216081-216176:-1:exon
so has part: feature:215850-216002:-1:exon
so has part: feature:215305-215382:-1:exon
so has part: feature:214974-215213:-1:exon

XP_023516750.1
type: Protein
SIO_000068: ncbiprotein

position:214974:-1
position: 214974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218708:-1
position: 218708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218537-218708:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:218314-218447:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:217609-217728:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:216081-216176:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:215850-216002:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:215305-215382:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:214974-215213:-1:exon

TRNAI-AAU
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAI-AAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(218933..219006)
location: region:218933-219006:-1
so has part: feature:218933-219006:-1:exon
subclass of: SO_0000663

111780781
type: Gene
SIO_000068: ncbigene

position:218933:-1
position: 218933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219006:-1
position: 219006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218933-219006:-1:exon

TRNAI-AAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAI-AAU
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA isoleucine (anticodon AAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(218970..218972),aa:Ile,seq:aat)
SIO_010081: TRNAI-AAU
subclass of: SO_0000673
so part of: TRNAI-AAU
location: complement(218933..219006)
location: region:218933-219006:-1
so has part: feature:218933-219006:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:218933-219006:-1:exon

TRNAI-AAU
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAI-AAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(219088..219161)
location: region:219088-219161:-1
so has part: feature:219088-219161:-1:exon
subclass of: SO_0000663

111780782
type: Gene
SIO_000068: ncbigene

position:219088:-1
position: 219088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219161:-1
position: 219161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219088-219161:-1:exon

TRNAI-AAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAI-AAU
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA isoleucine (anticodon AAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(219125..219127),aa:Ile,seq:aat)
SIO_010081: TRNAI-AAU
subclass of: SO_0000673
so part of: TRNAI-AAU
location: complement(219088..219161)
location: region:219088-219161:-1
so has part: feature:219088-219161:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:219088-219161:-1:exon

TRNAI-AAU
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAI-AAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(219241..219314)
location: region:219241-219314:-1
so has part: feature:219241-219314:-1:exon
subclass of: SO_0000663

111780783
type: Gene
SIO_000068: ncbigene

position:219241:-1
position: 219241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219314:-1
position: 219314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219241-219314:-1:exon

TRNAI-AAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAI-AAU
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA isoleucine (anticodon AAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(219278..219280),aa:Ile,seq:aat)
SIO_010081: TRNAI-AAU
subclass of: SO_0000673
so part of: TRNAI-AAU
location: complement(219241..219314)
location: region:219241-219314:-1
so has part: feature:219241-219314:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:219241-219314:-1:exon

LOC111779732
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111779732
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(221020..223747)
location: region:221020-223747:-1
so has part: feature:221020-223747:-1:exon
subclass of: SO_0000010

111779732
type: Gene
SIO_000068: ncbigene

position:221020:-1
position: 221020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223747:-1
position: 223747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221020-223747:-1:exon

LOC111779732
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111779732
product: galactinol synthase 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_023659851.1
SIO_010081: LOC111779732
subclass of: SO_0000673
so part of: LOC111779732
location: complement(join(221020..221436,222265..222399,222486..222806,223407..223747))
location: region:221020-223747:-1
so has part: feature:223407-223747:-1:exon
so has part: feature:222486-222806:-1:exon
so has part: feature:222265-222399:-1:exon
so has part: feature:221020-221436:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:223407-223747:-1:exon

position:223407:-1
position: 223407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:222486-222806:-1:exon

position:222486:-1
position: 222486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222806:-1
position: 222806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:222265-222399:-1:exon

position:222265:-1
position: 222265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222399:-1
position: 222399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:221020-221436:-1:exon

position:221436:-1
position: 221436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111779732
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111779732
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: galactinol synthase 2-like
translation: MAPELSGVGGAARCGYVTFLAGDGDYVKGVVGLAKGLRKVKSKYPLVVAVLPDVPEEHRELLRWQGCVVKEIEPVYPPDNQTQFAMAYYVINYSKLRIWEFVEFKKMIYLDGDIQVFENIDHLFEMEDSYLYGVMDCFCEKTWSHSAQYTIGYCQQCPDAVHWPSDFGPKPPLYFNAGMLVFEPDLRTYHDLLATLNATPPTPFAEQDFLNMFFKEKYRPIPAVYNLVMAMLWRHPENVELDKAKVVHYCAAGSKPWRYTGKEENMDRKDIKMLIKKWWEIYNDETLDFNYKKEGDEGGADTRQPFLAALSDAADVHYHTAPSAA
SIO_010081: LOC111779732
subclass of: SO_0000673
so part of: LOC111779732
location: complement(join(221215..221436,222265..222399,222486..222806,223407..223706))
location: region:221215-223706:-1
so has part: feature:223407-223706:-1:exon
so has part: feature:222486-222806:-1:exon
so has part: feature:222265-222399:-1:exon
so has part: feature:221215-221436:-1:exon

XP_023515619.1
type: Protein
SIO_000068: ncbiprotein

position:221215:-1
position: 221215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223706:-1
position: 223706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223407-223706:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:222486-222806:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:222265-222399:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:221215-221436:-1:exon

LOC111779564
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111779564
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(230757..238889)
location: region:230757-238889:-1
so has part: feature:230757-238889:-1:exon
subclass of: SO_0000010

111779564
type: Gene
SIO_000068: ncbigene

position:230757:-1
position: 230757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238889:-1
position: 238889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230757-238889:-1:exon

LOC111779564
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111779564
product: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_023659625.1
SIO_010081: LOC111779564
subclass of: SO_0000673
so part of: LOC111779564
location: complement(join(230757..231090,231175..231264,231341..231457,232355..232576,232661..232721,234710..234764,234839..234929,236945..237031,237117..237251,238685..238889))
location: region:230757-238889:-1
so has part: feature:238685-238889:-1:exon
so has part: feature:237117-237251:-1:exon
so has part: feature:236945-237031:-1:exon
so has part: feature:234839-234929:-1:exon
so has part: feature:234710-234764:-1:exon
so has part: feature:232661-232721:-1:exon
so has part: feature:232355-232576:-1:exon
so has part: feature:231341-231457:-1:exon
so has part: feature:231175-231264:-1:exon
so has part: feature:230757-231090:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:238685-238889:-1:exon

position:238685:-1
position: 238685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:237117-237251:-1:exon

position:237117:-1
position: 237117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237251:-1
position: 237251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:236945-237031:-1:exon

position:236945:-1
position: 236945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237031:-1
position: 237031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:234839-234929:-1:exon

position:234839:-1
position: 234839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234929:-1
position: 234929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:234710-234764:-1:exon

position:234710:-1
position: 234710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234764:-1
position: 234764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:232661-232721:-1:exon

position:232661:-1
position: 232661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232721:-1
position: 232721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:232355-232576:-1:exon

position:232355:-1
position: 232355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232576:-1
position: 232576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:231341-231457:-1:exon

position:231341:-1
position: 231341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231457:-1
position: 231457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:231175-231264:-1:exon

position:231175:-1
position: 231175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231264:-1
position: 231264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:230757-231090:-1:exon

position:231090:-1
position: 231090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111779564
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111779564
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic
translation: MGIMANPMAAHHQKSPSFSVLPSSLSDFHGARLHAQVQYKRKVMQPKGALHVTASANKNILVMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESDADYADFKSKVLHLKGDRKDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHFEVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLATAFVQVLGNEKASQQVFNISGEKYVTFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFASVEKAKSVLGWKPEFDLVEGLTDSYNLDFGRGTFRKEADFSTDDIILGKSLVLQA
SIO_010081: LOC111779564
subclass of: SO_0000673
so part of: LOC111779564
location: complement(join(230911..231090,231175..231264,231341..231457,232355..232576,232661..232721,234710..234764,234839..234929,236945..237031,237117..237251,238685..238798))
location: region:230911-238798:-1
so has part: feature:238685-238798:-1:exon
so has part: feature:237117-237251:-1:exon
so has part: feature:236945-237031:-1:exon
so has part: feature:234839-234929:-1:exon
so has part: feature:234710-234764:-1:exon
so has part: feature:232661-232721:-1:exon
so has part: feature:232355-232576:-1:exon
so has part: feature:231341-231457:-1:exon
so has part: feature:231175-231264:-1:exon
so has part: feature:230911-231090:-1:exon

XP_023515393.1
type: Protein
SIO_000068: ncbiprotein

position:230911:-1
position: 230911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238798:-1
position: 238798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238685-238798:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:237117-237251:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:236945-237031:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:234839-234929:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:234710-234764:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:232661-232721:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:232355-232576:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:231341-231457:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:231175-231264:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:230911-231090:-1:exon

LOC111779782
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111779782
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 240641..245877
location: region:240641-245877:1
so has part: feature:240641-245877:1:exon
subclass of: SO_0000010

111779782
type: Gene
SIO_000068: ncbigene

position:240641:1
position: 240641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245877:1
position: 245877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240641-245877:1:exon

LOC111779782
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111779782
product: Golgi apparatus membrane protein-like protein ECHIDNA
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_023659920.1
SIO_010081: LOC111779782
subclass of: SO_0000673
so part of: LOC111779782
location: join(240641..240816,241346..241402,241496..241699,241816..241875,242679..242805,245539..245877)
location: region:240641-245877:1
so has part: feature:240641-240816:1:exon
so has part: feature:241346-241402:1:exon
so has part: feature:241496-241699:1:exon
so has part: feature:241816-241875:1:exon
so has part: feature:242679-242805:1:exon
so has part: feature:245539-245877:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:240641-240816:1:exon

position:240816:1
position: 240816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:241346-241402:1:exon

position:241346:1
position: 241346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241402:1
position: 241402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:241496-241699:1:exon

position:241496:1
position: 241496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241699:1
position: 241699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:241816-241875:1:exon

position:241816:1
position: 241816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241875:1
position: 241875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:242679-242805:1:exon

position:242679:1
position: 242679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242805:1
position: 242805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:245539-245877:1:exon

position:245539:1
position: 245539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111779782
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111779782
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Golgi apparatus membrane protein-like protein ECHIDNA
translation: MDPNQPPVENYANPKTCFFHVFFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKNLSGRILVGLRWWNEIDDMGESVWKFESLDQESLARMNKKDSWLFWWTLYLTAVAWTVLGIFSLIKFQADYLLVVGVCLTLSIANIIGFTKCRKDAKKQFQQFATQTIASQFSSTLQSAFSV
SIO_010081: LOC111779782
subclass of: SO_0000673
so part of: LOC111779782
location: join(240802..240816,241346..241402,241496..241699,241816..241875,242679..242805,245539..245624)
location: region:240802-245624:1
so has part: feature:240802-240816:1:exon
so has part: feature:241346-241402:1:exon
so has part: feature:241496-241699:1:exon
so has part: feature:241816-241875:1:exon
so has part: feature:242679-242805:1:exon
so has part: feature:245539-245624:1:exon

XP_023515688.1
type: Protein
SIO_000068: ncbiprotein

position:240802:1
position: 240802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245624:1
position: 245624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240802-240816:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:241346-241402:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:241496-241699:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:241816-241875:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:242679-242805:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:245539-245624:1:exon

TRNAC-GCA
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAC-GCA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 248139..248210
location: region:248139-248210:1
so has part: feature:248139-248210:1:exon
subclass of: SO_0000663

111780855
type: Gene
SIO_000068: ncbigene

position:248139:1
position: 248139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:248210:1
position: 248210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248139-248210:1:exon

TRNAC-GCA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAC-GCA
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA cysteine (anticodon GCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:248171..248173,aa:Cys,seq:gca)
SIO_010081: TRNAC-GCA
subclass of: SO_0000673
so part of: TRNAC-GCA
location: 248139..248210
location: region:248139-248210:1
so has part: feature:248139-248210:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:248139-248210:1:exon

TRNAC-GCA
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAC-GCA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 248326..248397
location: region:248326-248397:1
so has part: feature:248326-248397:1:exon
subclass of: SO_0000663

111780867
type: Gene
SIO_000068: ncbigene

position:248326:1
position: 248326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:248397:1
position: 248397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248326-248397:1:exon

TRNAC-GCA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAC-GCA
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA cysteine (anticodon GCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:248358..248360,aa:Cys,seq:gca)
SIO_010081: TRNAC-GCA
subclass of: SO_0000673
so part of: TRNAC-GCA
location: 248326..248397
location: region:248326-248397:1
so has part: feature:248326-248397:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:248326-248397:1:exon

TRNAC-GCA
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAC-GCA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 248594..248665
location: region:248594-248665:1
so has part: feature:248594-248665:1:exon
subclass of: SO_0000663

111780878
type: Gene
SIO_000068: ncbigene

position:248594:1
position: 248594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:248665:1
position: 248665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248594-248665:1:exon

TRNAC-GCA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAC-GCA
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA cysteine (anticodon GCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:248626..248628,aa:Cys,seq:gca)
SIO_010081: TRNAC-GCA
subclass of: SO_0000673
so part of: TRNAC-GCA
location: 248594..248665
location: region:248594-248665:1
so has part: feature:248594-248665:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:248594-248665:1:exon

TRNAY-GUA
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAY-GUA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 249138..249209
location: region:249138-249209:1
so has part: feature:249138-249209:1:exon
subclass of: SO_0000663

111780890
type: Gene
SIO_000068: ncbigene

position:249138:1
position: 249138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249209:1
position: 249209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:249138-249209:1:exon

TRNAY-GUA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAY-GUA
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA tyrosine (anticodon GUA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:249170..249172,aa:Tyr,seq:gta)
SIO_010081: TRNAY-GUA
subclass of: SO_0000673
so part of: TRNAY-GUA
location: 249138..249209
location: region:249138-249209:1
so has part: feature:249138-249209:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:249138-249209:1:exon

LOC111779784
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111779784
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 263193..267709
location: region:263193-267709:1
so has part: feature:263193-267709:1:exon
subclass of: SO_0000010

111779784
type: Gene
SIO_000068: ncbigene

position:263193:1
position: 263193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267709:1
position: 267709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:263193-267709:1:exon

LOC111779784
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111779784
product: AP-3 complex subunit mu, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_023659921.1
SIO_010081: LOC111779784
subclass of: SO_0000673
so part of: LOC111779784
location: join(263193..263351,263473..263572,263804..263914,263984..264073,264186..264433,264651..264860,264964..265171,267285..267709)
location: region:263193-267709:1
so has part: feature:263193-263351:1:exon
so has part: feature:263473-263572:1:exon
so has part: feature:263804-263914:1:exon
so has part: feature:263984-264073:1:exon
so has part: feature:264186-264433:1:exon
so has part: feature:264651-264860:1:exon
so has part: feature:264964-265171:1:exon
so has part: feature:267285-267709:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:263193-263351:1:exon

position:263351:1
position: 263351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:263473-263572:1:exon

position:263473:1
position: 263473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263572:1
position: 263572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:263804-263914:1:exon

position:263804:1
position: 263804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263914:1
position: 263914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:263984-264073:1:exon

position:263984:1
position: 263984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264073:1
position: 264073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:264186-264433:1:exon

position:264186:1
position: 264186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264433:1
position: 264433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:264651-264860:1:exon

position:264651:1
position: 264651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264860:1
position: 264860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:264964-265171:1:exon

position:264964:1
position: 264964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265171:1
position: 265171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:267285-267709:1:exon

position:267285:1
position: 267285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111779784
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111779784
product: AP-3 complex subunit mu, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_023659922.1
SIO_010081: LOC111779784
subclass of: SO_0000673
so part of: LOC111779784
location: join(263193..263351,263473..263572,263810..263914,263984..264073,264186..264433,264651..264860,264964..265171,267285..267709)
location: region:263193-267709:1
so has part: feature:263193-263351:1:exon
so has part: feature:263473-263572:1:exon
so has part: feature:263810-263914:1:exon
so has part: feature:263984-264073:1:exon
so has part: feature:264186-264433:1:exon
so has part: feature:264651-264860:1:exon
so has part: feature:264964-265171:1:exon
so has part: feature:267285-267709:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:263193-263351:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:263473-263572:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:263810-263914:1:exon

position:263810:1
position: 263810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:263984-264073:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:264186-264433:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:264651-264860:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:264964-265171:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:267285-267709:1:exon

LOC111779784
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111779784
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-3 complex subunit mu isoform X1
translation: MLQCIFLLSDSGEIMLEKQLTGHRVDRSICAWFWEQSVSQGDSFKLQPVIASPTHYLFQVVREGITFLACTQVEMPPLMGIEFLCRVADVLTDYLGELNEDLVKDNFVIVYELLDEMIDNGFPLTTEPNILREIIAPPNLVSKVLSVVTGNSSNVSDTIPGAIASHVPWRTTDPKYAKNEVNVDLVEEMDAILNRDGHLVKCEIYGEIQVNSHLSGLPDLTLSFTNPSILDDVRFHPCVRFRPWESHQILSFVPPDGQFKLMSYRVRKLKNTPVYVKPQFTSDAGMCRVSVLVGIRHDPGKPIDSIDVQFQLPSCVLSADLTSNYGTVNILSNKMCSWTIGKMPKDKTPSMSGTLTLETGLQQLHIFPTFQVRFKIMGLVLSALQVDKLDVKNLPNHPYKGFRALTRAGKFEVRS
SIO_010081: LOC111779784
subclass of: SO_0000673
so part of: LOC111779784
location: join(263317..263351,263473..263572,263804..263914,263984..264073,264186..264433,264651..264860,264964..265171,267285..267530)
location: region:263317-267530:1
so has part: feature:263317-263351:1:exon
so has part: feature:263473-263572:1:exon
so has part: feature:263804-263914:1:exon
so has part: feature:263984-264073:1:exon
so has part: feature:264186-264433:1:exon
so has part: feature:264651-264860:1:exon
so has part: feature:264964-265171:1:exon
so has part: feature:267285-267530:1:exon

XP_023515689.1
type: Protein
SIO_000068: ncbiprotein

position:263317:1
position: 263317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267530:1
position: 267530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:263317-263351:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:263473-263572:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:263804-263914:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:263984-264073:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:264186-264433:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:264651-264860:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:264964-265171:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:267285-267530:1:exon

LOC111779784
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111779784
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-3 complex subunit mu isoform X2
translation: MLQCIFLLSDSGEIMLEKQLTGHRVDRSICAWFWEQSVSQGDSFKPVIASPTHYLFQVVREGITFLACTQVEMPPLMGIEFLCRVADVLTDYLGELNEDLVKDNFVIVYELLDEMIDNGFPLTTEPNILREIIAPPNLVSKVLSVVTGNSSNVSDTIPGAIASHVPWRTTDPKYAKNEVNVDLVEEMDAILNRDGHLVKCEIYGEIQVNSHLSGLPDLTLSFTNPSILDDVRFHPCVRFRPWESHQILSFVPPDGQFKLMSYRVRKLKNTPVYVKPQFTSDAGMCRVSVLVGIRHDPGKPIDSIDVQFQLPSCVLSADLTSNYGTVNILSNKMCSWTIGKMPKDKTPSMSGTLTLETGLQQLHIFPTFQVRFKIMGLVLSALQVDKLDVKNLPNHPYKGFRALTRAGKFEVRS
SIO_010081: LOC111779784
subclass of: SO_0000673
so part of: LOC111779784
location: join(263317..263351,263473..263572,263810..263914,263984..264073,264186..264433,264651..264860,264964..265171,267285..267530)
location: region:263317-267530:1
so has part: feature:263317-263351:1:exon
so has part: feature:263473-263572:1:exon
so has part: feature:263810-263914:1:exon
so has part: feature:263984-264073:1:exon
so has part: feature:264186-264433:1:exon
so has part: feature:264651-264860:1:exon
so has part: feature:264964-265171:1:exon
so has part: feature:267285-267530:1:exon

XP_023515690.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:263317-263351:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:263473-263572:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:263810-263914:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:263984-264073:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:264186-264433:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:264651-264860:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:264964-265171:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:267285-267530:1:exon

LOC111779785
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111779785
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(267553..270512)
location: region:267553-270512:-1
so has part: feature:267553-270512:-1:exon
subclass of: SO_0000010

111779785
type: Gene
SIO_000068: ncbigene

position:267553:-1
position: 267553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270512:-1
position: 270512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:267553-270512:-1:exon

LOC111779785
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111779785
product: psbP domain-containing protein 1, chloroplastic
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_023659923.1
SIO_010081: LOC111779785
subclass of: SO_0000673
so part of: LOC111779785
location: complement(join(267553..267903,269117..269536,270246..270512))
location: region:267553-270512:-1
so has part: feature:270246-270512:-1:exon
so has part: feature:269117-269536:-1:exon
so has part: feature:267553-267903:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:270246-270512:-1:exon

position:270246:-1
position: 270246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:269117-269536:-1:exon

position:269117:-1
position: 269117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269536:-1
position: 269536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:267553-267903:-1:exon

position:267903:-1
position: 267903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111779785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111779785
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: psbP domain-containing protein 1, chloroplastic
translation: MAVILDSFLPPIHTLTSSSRKWIPTASSSPRWPPIDSSPKSRFSLSSESQPIKGLAVPRRSAMALILSSCIFSNSALAEQSVGLLEYIDTFDGYSFNYPKNWIQVRGAGADIFFRDPFVLDENISVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENNRLYELRLQTPENVFVEEENELRQVMDSFRVNKVNA
SIO_010081: LOC111779785
subclass of: SO_0000673
so part of: LOC111779785
location: complement(join(267682..267903,269117..269536,270246..270398))
location: region:267682-270398:-1
so has part: feature:270246-270398:-1:exon
so has part: feature:269117-269536:-1:exon
so has part: feature:267682-267903:-1:exon

XP_023515691.1
type: Protein
SIO_000068: ncbiprotein

position:267682:-1
position: 267682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270398:-1
position: 270398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270246-270398:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:269117-269536:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:267682-267903:-1:exon

TRNAC-GCA
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAC-GCA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(270568..270639)
location: region:270568-270639:-1
so has part: feature:270568-270639:-1:exon
subclass of: SO_0000663

111780784
type: Gene
SIO_000068: ncbigene

position:270568:-1
position: 270568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270639:-1
position: 270639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270568-270639:-1:exon

TRNAC-GCA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAC-GCA
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA cysteine (anticodon GCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(270605..270607),aa:Cys,seq:gca)
SIO_010081: TRNAC-GCA
subclass of: SO_0000673
so part of: TRNAC-GCA
location: complement(270568..270639)
location: region:270568-270639:-1
so has part: feature:270568-270639:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:270568-270639:-1:exon

LOC111779786
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111779786
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(272660..278755)
location: region:272660-278755:-1
so has part: feature:272660-278755:-1:exon
subclass of: SO_0000010

111779786
type: Gene
SIO_000068: ncbigene

position:272660:-1
position: 272660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278755:-1
position: 278755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272660-278755:-1:exon

LOC111779786
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111779786
product: ribosome biogenesis protein BRX1 homolog 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_023659924.1
SIO_010081: LOC111779786
subclass of: SO_0000673
so part of: LOC111779786
location: complement(join(272660..272961,273974..274072,274153..274221,274771..274872,275919..276043,276151..276229,276640..276781,277642..277869,278453..278755))
location: region:272660-278755:-1
so has part: feature:278453-278755:-1:exon
so has part: feature:277642-277869:-1:exon
so has part: feature:276640-276781:-1:exon
so has part: feature:276151-276229:-1:exon
so has part: feature:275919-276043:-1:exon
so has part: feature:274771-274872:-1:exon
so has part: feature:274153-274221:-1:exon
so has part: feature:273974-274072:-1:exon
so has part: feature:272660-272961:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:278453-278755:-1:exon

position:278453:-1
position: 278453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:277642-277869:-1:exon

position:277642:-1
position: 277642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277869:-1
position: 277869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:276640-276781:-1:exon

position:276640:-1
position: 276640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276781:-1
position: 276781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:276151-276229:-1:exon

position:276151:-1
position: 276151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276229:-1
position: 276229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:275919-276043:-1:exon

position:275919:-1
position: 275919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276043:-1
position: 276043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:274771-274872:-1:exon

position:274771:-1
position: 274771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274872:-1
position: 274872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:274153-274221:-1:exon

position:274153:-1
position: 274153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274221:-1
position: 274221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:273974-274072:-1:exon

position:273974:-1
position: 273974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274072:-1
position: 274072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:272660-272961:-1:exon

position:272961:-1
position: 272961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111779786
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111779786
product: ribosome biogenesis protein BRX1 homolog 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_023659926.1
SIO_010081: LOC111779786
subclass of: SO_0000673
so part of: LOC111779786
location: complement(join(272830..272961,273974..274072,274153..274221,274771..274872,275919..276043,276151..276229,276640..276781,277642..277869,278506..278755))
location: region:272830-278755:-1
so has part: feature:278506-278755:-1:exon
so has part: feature:277642-277869:-1:exon
so has part: feature:276640-276781:-1:exon
so has part: feature:276151-276229:-1:exon
so has part: feature:275919-276043:-1:exon
so has part: feature:274771-274872:-1:exon
so has part: feature:274153-274221:-1:exon
so has part: feature:273974-274072:-1:exon
so has part: feature:272830-272961:-1:exon

position:272830:-1
position: 272830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278506-278755:-1:exon

position:278506:-1
position: 278506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:277642-277869:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:276640-276781:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:276151-276229:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:275919-276043:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:274771-274872:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:274153-274221:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:273974-274072:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:272830-272961:-1:exon

LOC111779786
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111779786
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosome biogenesis protein BRX1 homolog 1-like
translation: MVKKRKHSETLPAVPVKKDDVAPERSKRTLTGWKDKEVITKSESDSDHAVFRNKEKVLVTCSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDAHWKLLKEIIVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMWKE
SIO_010081: LOC111779786
subclass of: SO_0000673
so part of: LOC111779786
location: complement(join(272830..272961,273974..274072,274153..274221,274771..274872,275919..276043,276151..276229,276640..276781,277642..277844))
location: region:272830-277844:-1
so has part: feature:277642-277844:-1:exon
so has part: feature:276640-276781:-1:exon
so has part: feature:276151-276229:-1:exon
so has part: feature:275919-276043:-1:exon
so has part: feature:274771-274872:-1:exon
so has part: feature:274153-274221:-1:exon
so has part: feature:273974-274072:-1:exon
so has part: feature:272830-272961:-1:exon

XP_023515692.1
type: Protein
SIO_000068: ncbiprotein

position:277844:-1
position: 277844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277642-277844:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:276640-276781:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:276151-276229:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:275919-276043:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:274771-274872:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:274153-274221:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:273974-274072:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:272830-272961:-1:exon

LOC111779786
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111779786
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosome biogenesis protein BRX1 homolog 1-like
translation: MVKKRKHSETLPAVPVKKDDVAPERSKRTLTGWKDKEVITKSESDSDHAVFRNKEKVLVTCSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDAHWKLLKEIIVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMWKE
SIO_010081: LOC111779786
subclass of: SO_0000673
so part of: LOC111779786
location: complement(join(272830..272961,273974..274072,274153..274221,274771..274872,275919..276043,276151..276229,276640..276781,277642..277844))
location: region:272830-277844:-1
so has part: feature:277642-277844:-1:exon
so has part: feature:276640-276781:-1:exon
so has part: feature:276151-276229:-1:exon
so has part: feature:275919-276043:-1:exon
so has part: feature:274771-274872:-1:exon
so has part: feature:274153-274221:-1:exon
so has part: feature:273974-274072:-1:exon
so has part: feature:272830-272961:-1:exon

XP_023515694.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:277642-277844:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:276640-276781:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:276151-276229:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:275919-276043:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:274771-274872:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:274153-274221:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:273974-274072:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:272830-272961:-1:exon

LOC111780709
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780709
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(282729..283377)
location: region:282729-283377:-1
so has part: feature:282729-283377:-1:exon
subclass of: SO_0000010

111780709
type: Gene
SIO_000068: ncbigene

position:282729:-1
position: 282729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283377:-1
position: 283377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282729-283377:-1:exon

LOC111780709
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111780709
product: uncharacterized LOC111780709
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023661185.1
SIO_010081: LOC111780709
subclass of: SO_0000673
so part of: LOC111780709
location: complement(282729..283377)
location: region:282729-283377:-1
so has part: feature:282729-283377:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:282729-283377:-1:exon

LOC111780709
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111780709
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111780709
translation: MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGKITFQTPAGLFRTFPVSAFQVEEPLKQVSEKEHGVGAVGVKEV
SIO_010081: LOC111780709
subclass of: SO_0000673
so part of: LOC111780709
location: complement(282878..283366)
location: region:282878-283366:-1
so has part: feature:282878-283366:-1:exon

XP_023516953.1
type: Protein
SIO_000068: ncbiprotein

position:282878:-1
position: 282878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283366:-1
position: 283366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282878-283366:-1:exon

LOC111780710
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780710
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(296872..297729)
location: region:296872-297729:-1
so has part: feature:296872-297729:-1:exon
subclass of: SO_0000010

111780710
type: Gene
SIO_000068: ncbigene

position:296872:-1
position: 296872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297729:-1
position: 297729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296872-297729:-1:exon

LOC111780710
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111780710
product: uncharacterized LOC111780710
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023661186.1
SIO_010081: LOC111780710
subclass of: SO_0000673
so part of: LOC111780710
location: complement(296872..297729)
location: region:296872-297729:-1
so has part: feature:296872-297729:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:296872-297729:-1:exon

LOC111780710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111780710
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111780710
translation: MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGKITFQTPAGLFRTFPVSAFQVEEPLKQVSEKEHGVGAVGVKEV
SIO_010081: LOC111780710
subclass of: SO_0000673
so part of: LOC111780710
location: complement(297229..297717)
location: region:297229-297717:-1
so has part: feature:297229-297717:-1:exon

XP_023516954.1
type: Protein
SIO_000068: ncbiprotein

position:297229:-1
position: 297229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297717:-1
position: 297717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297229-297717:-1:exon

LOC111780577
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780577
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 308317..314236
location: region:308317-314236:1
so has part: feature:308317-314236:1:exon
subclass of: SO_0000010

111780577
type: Gene
SIO_000068: ncbigene

position:308317:1
position: 308317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314236:1
position: 314236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308317-314236:1:exon

LOC111780577
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111780577
product: uncharacterized LOC111780577
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_023661011.1
SIO_010081: LOC111780577
subclass of: SO_0000673
so part of: LOC111780577
location: join(308317..308493,309516..309623,310832..310980,313929..314236)
location: region:308317-314236:1
so has part: feature:308317-308493:1:exon
so has part: feature:309516-309623:1:exon
so has part: feature:310832-310980:1:exon
so has part: feature:313929-314236:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:308317-308493:1:exon

position:308493:1
position: 308493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:309516-309623:1:exon

position:309516:1
position: 309516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309623:1
position: 309623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:310832-310980:1:exon

position:310832:1
position: 310832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310980:1
position: 310980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:313929-314236:1:exon

position:313929:1
position: 313929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111780577
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111780577
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111780577
translation: MAWRQIISNHRSILQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRSDALKA
SIO_010081: LOC111780577
subclass of: SO_0000673
so part of: LOC111780577
location: join(309524..309623,310832..310980,313929..314006)
location: region:309524-314006:1
so has part: feature:309524-309623:1:exon
so has part: feature:310832-310980:1:exon
so has part: feature:313929-314006:1:exon

XP_023516779.1
type: Protein
SIO_000068: ncbiprotein

position:309524:1
position: 309524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314006:1
position: 314006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309524-309623:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:310832-310980:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:313929-314006:1:exon

LOC111780578
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780578
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 315765..318185
location: region:315765-318185:1
so has part: feature:315765-318185:1:exon
subclass of: SO_0000011

111780578
type: Gene
SIO_000068: ncbigene

position:315765:1
position: 315765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318185:1
position: 318185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315765-318185:1:exon

LOC111780578
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3664
nc RNA class: lncRNA
gene: LOC111780578
product: uncharacterized LOC111780578, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_002812859.1
SIO_010081: LOC111780578
subclass of: SO_0000673
so part of: LOC111780578
location: join(315765..315789,315992..316260,317255..317415,318021..318185)
location: region:315765-318185:1
so has part: feature:315765-315789:1:exon
so has part: feature:315992-316260:1:exon
so has part: feature:317255-317415:1:exon
so has part: feature:318021-318185:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:315765-315789:1:exon

position:315789:1
position: 315789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:315992-316260:1:exon

position:315992:1
position: 315992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316260:1
position: 316260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:317255-317415:1:exon

position:317255:1
position: 317255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317415:1
position: 317415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:318021-318185:1:exon

position:318021:1
position: 318021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111780578
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3664
nc RNA class: lncRNA
gene: LOC111780578
product: uncharacterized LOC111780578, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_002812860.1
SIO_010081: LOC111780578
subclass of: SO_0000673
so part of: LOC111780578
location: join(315889..316260,317255..317415,317990..318185)
location: region:315889-318185:1
so has part: feature:315889-316260:1:exon
so has part: feature:317255-317415:1:exon
so has part: feature:317990-318185:1:exon

position:315889:1
position: 315889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315889-316260:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:317255-317415:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:317990-318185:1:exon

position:317990:1
position: 317990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111780578
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3664
nc RNA class: lncRNA
gene: LOC111780578
product: uncharacterized LOC111780578, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_002812858.1
SIO_010081: LOC111780578
subclass of: SO_0000673
so part of: LOC111780578
location: join(315889..316260,317255..317415,318021..318185)
location: region:315889-318185:1
so has part: feature:315889-316260:1:exon
so has part: feature:317255-317415:1:exon
so has part: feature:318021-318185:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:315889-316260:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:317255-317415:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:318021-318185:1:exon

LOC111779562
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111779562
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 318269..319145
location: region:318269-319145:1
so has part: feature:318269-319145:1:exon
subclass of: SO_0000011

111779562
type: Gene
SIO_000068: ncbigene

position:318269:1
position: 318269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319145:1
position: 319145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318269-319145:1:exon

LOC111779562
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3664
nc RNA class: lncRNA
gene: LOC111779562
product: uncharacterized LOC111779562
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_002812705.1
SIO_010081: LOC111779562
subclass of: SO_0000673
so part of: LOC111779562
location: join(318269..318354,318960..319145)
location: region:318269-319145:1
so has part: feature:318269-318354:1:exon
so has part: feature:318960-319145:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:318269-318354:1:exon

position:318354:1
position: 318354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:318960-319145:1:exon

position:318960:1
position: 318960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111780625
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780625
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 319365..321449
location: region:319365-321449:1
so has part: feature:319365-321449:1:exon
subclass of: SO_0000011

111780625
type: Gene
SIO_000068: ncbigene

position:319365:1
position: 319365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321449:1
position: 321449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:319365-321449:1:exon

LOC111780625
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3664
nc RNA class: lncRNA
gene: LOC111780625
product: uncharacterized LOC111780625, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_002812870.1
SIO_010081: LOC111780625
subclass of: SO_0000673
so part of: LOC111780625
location: join(319365..319503,320498..320658,321233..321449)
location: region:319365-321449:1
so has part: feature:319365-319503:1:exon
so has part: feature:320498-320658:1:exon
so has part: feature:321233-321449:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:319365-319503:1:exon

position:319503:1
position: 319503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:320498-320658:1:exon

position:320498:1
position: 320498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320658:1
position: 320658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:321233-321449:1:exon

position:321233:1
position: 321233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111780625
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3664
nc RNA class: lncRNA
gene: LOC111780625
product: uncharacterized LOC111780625, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_002812869.1
SIO_010081: LOC111780625
subclass of: SO_0000673
so part of: LOC111780625
location: join(319365..319503,320498..320658,321264..321449)
location: region:319365-321449:1
so has part: feature:319365-319503:1:exon
so has part: feature:320498-320658:1:exon
so has part: feature:321264-321449:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:319365-319503:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:320498-320658:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:321264-321449:1:exon

position:321264:1
position: 321264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111780283
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780283
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(326861..328136)
location: region:326861-328136:-1
so has part: feature:326861-328136:-1:exon
subclass of: SO_0000010

111780283
type: Gene
SIO_000068: ncbigene

position:326861:-1
position: 326861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328136:-1
position: 328136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326861-328136:-1:exon

LOC111780283
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111780283
product: transcription factor bHLH149-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_023660641.1
SIO_010081: LOC111780283
subclass of: SO_0000673
so part of: LOC111780283
location: complement(join(326861..327623,327960..328136))
location: region:326861-328136:-1
so has part: feature:327960-328136:-1:exon
so has part: feature:326861-327623:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:327960-328136:-1:exon

position:327960:-1
position: 327960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:326861-327623:-1:exon

position:327623:-1
position: 327623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111780283
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111780283
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor bHLH149-like
translation: MDAIASNLEESRSSDFTEQRPSKRRKIESENQAAEICSARSTDLKRRWRTESEQQIYSSKLVEALHRVTRRTASPPAKSSINGRKVRETADTVLAVAAKGKTRWSRAILTNRLELKLKNHKKAKPAGNCFRPKKLKIRYETRKLPTVQRKVQTLGRLVPGCRKISFPNLLDEATDYIAALQMQVRAMTAVAELLAGTPADQQQSFRTNS
SIO_010081: LOC111780283
subclass of: SO_0000673
so part of: LOC111780283
location: complement(326926..327555)
location: region:326926-327555:-1
so has part: feature:326926-327555:-1:exon

XP_023516409.1
type: Protein
SIO_000068: ncbiprotein

position:326926:-1
position: 326926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327555:-1
position: 327555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326926-327555:-1:exon

LOC111780024
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780024
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(337097..359225)
location: region:337097-359225:-1
so has part: feature:337097-359225:-1:exon
subclass of: SO_0000010

111780024
type: Gene
SIO_000068: ncbigene

position:337097:-1
position: 337097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359225:-1
position: 359225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337097-359225:-1:exon

LOC111780024
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111780024
product: protein SUPPRESSOR OF QUENCHING 1, chloroplastic, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_023660275.1
SIO_010081: LOC111780024
subclass of: SO_0000673
so part of: LOC111780024
location: complement(join(337097..337385,337463..337612,337756..338003,339664..339697,339790..339882,340988..341095,341692..341813,341895..341944,343186..343343,343473..343566,343672..343736,343818..343922,345120..345317,345452..345574,345811..345906,347233..347343,347420..347495,347589..347649,348255..348339,348414..348501,349826..349961,350223..350347,352382..352440,353949..354048,355010..355104,355200..355256,356974..357074,358553..358940,359063..359225))
location: region:337097-359225:-1
so has part: feature:359063-359225:-1:exon
so has part: feature:358553-358940:-1:exon
so has part: feature:356974-357074:-1:exon
so has part: feature:355200-355256:-1:exon
so has part: feature:355010-355104:-1:exon
so has part: feature:353949-354048:-1:exon
so has part: feature:352382-352440:-1:exon
so has part: feature:350223-350347:-1:exon
so has part: feature:349826-349961:-1:exon
so has part: feature:348414-348501:-1:exon
so has part: feature:348255-348339:-1:exon
so has part: feature:347589-347649:-1:exon
so has part: feature:347420-347495:-1:exon
so has part: feature:347233-347343:-1:exon
so has part: feature:345811-345906:-1:exon
so has part: feature:345452-345574:-1:exon
so has part: feature:345120-345317:-1:exon
so has part: feature:343818-343922:-1:exon
so has part: feature:343672-343736:-1:exon
so has part: feature:343473-343566:-1:exon
so has part: feature:343186-343343:-1:exon
so has part: feature:341895-341944:-1:exon
so has part: feature:341692-341813:-1:exon
so has part: feature:340988-341095:-1:exon
so has part: feature:339790-339882:-1:exon
so has part: feature:339664-339697:-1:exon
so has part: feature:337756-338003:-1:exon
so has part: feature:337463-337612:-1:exon
so has part: feature:337097-337385:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:359063-359225:-1:exon

position:359063:-1
position: 359063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:358553-358940:-1:exon

position:358553:-1
position: 358553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358940:-1
position: 358940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:356974-357074:-1:exon

position:356974:-1
position: 356974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357074:-1
position: 357074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:355200-355256:-1:exon

position:355200:-1
position: 355200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355256:-1
position: 355256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:355010-355104:-1:exon

position:355010:-1
position: 355010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355104:-1
position: 355104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:353949-354048:-1:exon

position:353949:-1
position: 353949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354048:-1
position: 354048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:352382-352440:-1:exon

position:352382:-1
position: 352382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:352440:-1
position: 352440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:350223-350347:-1:exon

position:350223:-1
position: 350223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350347:-1
position: 350347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:349826-349961:-1:exon

position:349826:-1
position: 349826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349961:-1
position: 349961
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 10
SIO_000628: feature:348414-348501:-1:exon

position:348414:-1
position: 348414
reference: sequence
type: ReverseStrandPosition
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position:348501:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 11
SIO_000628: feature:348255-348339:-1:exon

position:348255:-1
position: 348255
reference: sequence
type: ReverseStrandPosition
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position:348339:-1
position: 348339
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 12
SIO_000628: feature:347589-347649:-1:exon

position:347589:-1
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reference: sequence
type: ReverseStrandPosition
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position:347649:-1
position: 347649
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 13
SIO_000628: feature:347420-347495:-1:exon

position:347420:-1
position: 347420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:347495:-1
position: 347495
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 14
SIO_000628: feature:347233-347343:-1:exon

position:347233:-1
position: 347233
reference: sequence
type: ReverseStrandPosition
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position:347343:-1
position: 347343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:345811-345906:-1:exon

position:345811:-1
position: 345811
reference: sequence
type: ReverseStrandPosition
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position:345906:-1
position: 345906
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 16
SIO_000628: feature:345452-345574:-1:exon

position:345452:-1
position: 345452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345574:-1
position: 345574
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 17
SIO_000628: feature:345120-345317:-1:exon

position:345120:-1
position: 345120
reference: sequence
type: ReverseStrandPosition
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position:345317:-1
position: 345317
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 18
SIO_000628: feature:343818-343922:-1:exon

position:343818:-1
position: 343818
reference: sequence
type: ReverseStrandPosition
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position:343922:-1
position: 343922
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 19
SIO_000628: feature:343672-343736:-1:exon

position:343672:-1
position: 343672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343736:-1
position: 343736
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 20
SIO_000628: feature:343473-343566:-1:exon

position:343473:-1
position: 343473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343566:-1
position: 343566
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 21
SIO_000628: feature:343186-343343:-1:exon

position:343186:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343343:-1
position: 343343
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 22
SIO_000628: feature:341895-341944:-1:exon

position:341895:-1
position: 341895
reference: sequence
type: ReverseStrandPosition
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position:341944:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 23
SIO_000628: feature:341692-341813:-1:exon

position:341692:-1
position: 341692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341813:-1
position: 341813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:340988-341095:-1:exon

position:340988:-1
position: 340988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341095:-1
position: 341095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:339790-339882:-1:exon

position:339790:-1
position: 339790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339882:-1
position: 339882
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 26
SIO_000628: feature:339664-339697:-1:exon

position:339664:-1
position: 339664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339697:-1
position: 339697
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 27
SIO_000628: feature:337756-338003:-1:exon

position:337756:-1
position: 337756
reference: sequence
type: ReverseStrandPosition
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position:338003:-1
position: 338003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:337463-337612:-1:exon

position:337463:-1
position: 337463
reference: sequence
type: ReverseStrandPosition
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position:337612:-1
position: 337612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:337097-337385:-1:exon

position:337385:-1
position: 337385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111780024
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111780024
product: protein SUPPRESSOR OF QUENCHING 1, chloroplastic, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_023660276.1
SIO_010081: LOC111780024
subclass of: SO_0000673
so part of: LOC111780024
location: complement(join(337097..337385,337463..337612,337756..338003,339664..339697,339790..339882,341692..341831,341895..341944,343186..343343,343473..343566,343672..343736,343818..343922,345120..345317,345452..345574,345811..345906,347233..347343,347420..347495,347589..347649,348255..348339,348414..348501,349826..349961,350223..350347,352382..352440,353949..354048,355010..355104,355200..355256,356974..357074,358553..358940,359063..359225))
location: region:337097-359225:-1
so has part: feature:359063-359225:-1:exon
so has part: feature:358553-358940:-1:exon
so has part: feature:356974-357074:-1:exon
so has part: feature:355200-355256:-1:exon
so has part: feature:355010-355104:-1:exon
so has part: feature:353949-354048:-1:exon
so has part: feature:352382-352440:-1:exon
so has part: feature:350223-350347:-1:exon
so has part: feature:349826-349961:-1:exon
so has part: feature:348414-348501:-1:exon
so has part: feature:348255-348339:-1:exon
so has part: feature:347589-347649:-1:exon
so has part: feature:347420-347495:-1:exon
so has part: feature:347233-347343:-1:exon
so has part: feature:345811-345906:-1:exon
so has part: feature:345452-345574:-1:exon
so has part: feature:345120-345317:-1:exon
so has part: feature:343818-343922:-1:exon
so has part: feature:343672-343736:-1:exon
so has part: feature:343473-343566:-1:exon
so has part: feature:343186-343343:-1:exon
so has part: feature:341895-341944:-1:exon
so has part: feature:341692-341831:-1:exon
so has part: feature:339790-339882:-1:exon
so has part: feature:339664-339697:-1:exon
so has part: feature:337756-338003:-1:exon
so has part: feature:337463-337612:-1:exon
so has part: feature:337097-337385:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:359063-359225:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:358553-358940:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:356974-357074:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:355200-355256:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:355010-355104:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:353949-354048:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:352382-352440:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:350223-350347:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:349826-349961:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:348414-348501:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:348255-348339:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:347589-347649:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:347420-347495:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:347233-347343:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:345811-345906:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:345452-345574:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:345120-345317:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:343818-343922:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:343672-343736:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:343473-343566:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:343186-343343:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:341895-341944:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:341692-341831:-1:exon

position:341831:-1
position: 341831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:339790-339882:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:339664-339697:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:337756-338003:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:337463-337612:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:337097-337385:-1:exon

LOC111780024
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111780024
product: protein SUPPRESSOR OF QUENCHING 1, chloroplastic, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_023660273.1
SIO_010081: LOC111780024
subclass of: SO_0000673
so part of: LOC111780024
location: complement(join(337097..337385,337463..337612,337756..338003,339664..339697,339790..339882,340988..341095,341692..341831,341895..341944,343186..343343,343473..343566,343672..343736,343818..343922,345120..345317,345452..345574,345811..345906,347233..347343,347420..347495,347589..347649,348255..348339,348414..348501,349826..349961,350223..350347,352382..352440,353949..354048,355010..355104,355200..355256,356974..357074,358553..358940,359063..359225))
location: region:337097-359225:-1
so has part: feature:359063-359225:-1:exon
so has part: feature:358553-358940:-1:exon
so has part: feature:356974-357074:-1:exon
so has part: feature:355200-355256:-1:exon
so has part: feature:355010-355104:-1:exon
so has part: feature:353949-354048:-1:exon
so has part: feature:352382-352440:-1:exon
so has part: feature:350223-350347:-1:exon
so has part: feature:349826-349961:-1:exon
so has part: feature:348414-348501:-1:exon
so has part: feature:348255-348339:-1:exon
so has part: feature:347589-347649:-1:exon
so has part: feature:347420-347495:-1:exon
so has part: feature:347233-347343:-1:exon
so has part: feature:345811-345906:-1:exon
so has part: feature:345452-345574:-1:exon
so has part: feature:345120-345317:-1:exon
so has part: feature:343818-343922:-1:exon
so has part: feature:343672-343736:-1:exon
so has part: feature:343473-343566:-1:exon
so has part: feature:343186-343343:-1:exon
so has part: feature:341895-341944:-1:exon
so has part: feature:341692-341831:-1:exon
so has part: feature:340988-341095:-1:exon
so has part: feature:339790-339882:-1:exon
so has part: feature:339664-339697:-1:exon
so has part: feature:337756-338003:-1:exon
so has part: feature:337463-337612:-1:exon
so has part: feature:337097-337385:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:359063-359225:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:358553-358940:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:356974-357074:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:355200-355256:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:355010-355104:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:353949-354048:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:352382-352440:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:350223-350347:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:349826-349961:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:348414-348501:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:348255-348339:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:347589-347649:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:347420-347495:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:347233-347343:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:345811-345906:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:345452-345574:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:345120-345317:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:343818-343922:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:343672-343736:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:343473-343566:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:343186-343343:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:341895-341944:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:341692-341831:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:340988-341095:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:339790-339882:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:339664-339697:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:337756-338003:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:337463-337612:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:337097-337385:-1:exon

LOC111780024
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111780024
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SUPPRESSOR OF QUENCHING 1, chloroplastic isoform X2
translation: MESSIAFKYLSPSPPLASSARLCFLSSKLRGTRPTSVPCYDLEWRSKRFVFKQKMMVKASAKVEETSAKESAYKSEWGKVSAVLFDMDGVLCNSEDLSRRAGVDVFSELGVEVTPEDFVPFMGTGEANFLGGVASVKGVAGFSPEAAKKRFFEIYLEKYAKPNSGIGFPGALELITECKSKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFIAASKLLNVPTDECIVIEDALAGVQAAQAAKMRCIAVKTTLSDETLKTAGPSLIRNDIGNITIHDILSGGSDTSNEKIQGSQFLQTSEQISPRKDTSGIDAAAAVQDSEAVNDGSLSIGRLQGTRRDIVRYGSLGIALSCLVITITNWKAMQYTSPKAIWNLFFGVNQPSFQNNASSGGLVRDRIQRFIEYISEIETRETAPVVPEFPSKLDWLNSSPLRFRKDLKGKVVLLDFWTYCCINCMHVLPDLEYLEKKYNDKAFAVVGVHSAKFDNEKDLEAIRNAVLRYGITHPVVNDGDMFLWRELGINSWPTFAVVGPNGKLLAQISGEGRRKDLDDFVEAALLFYSEKKILDSRPLPLRLEKDSDPRLITSPLKFPGKLTIDVLNNRLFISDSNHNRIVVTDLSGNFLIQIGSTGEDGLRDGTFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVRETVHTLAGNGTKGSDYQGGKEGTSQLLNSPWDVCFEPISEKVYIAMAGQHQIWVHDTLNGVTKSFSGDGFERNLNGSSSSSSSFAQPSGLSVSPDLSEVYIADSESSSIRAVDLKTGGSRLLAGGDPIFSDNLFKFGDQDGVGSEVLLQHPLGVLCSKDGQIYIADSYNHKIKRLDPVSKRVTTIAGTGKAGLKDGTALAAQLSEPSGITEAEGRLFISDTNNNVIRYLDLNNQEQPQLLTLELKGVQPPNPKPKSFKRLRKRSSDTQTIVVDGGSFREGNLSLKISLPEEYHFSKEARSKFIVETEPESALSIDPSDGYLSPDGFANLRFRRSSPAASLGRISCKVYYCKEDEVCLYKSLLFEVPFREELSEPSRAEITLAFEVKPKASTSSLPL
SIO_010081: LOC111780024
subclass of: SO_0000673
so part of: LOC111780024
location: complement(join(337233..337385,337463..337612,337756..338003,339664..339697,339790..339882,340988..341095,341692..341813,341895..341944,343186..343343,343473..343566,343672..343736,343818..343922,345120..345317,345452..345574,345811..345906,347233..347343,347420..347495,347589..347649,348255..348339,348414..348501,349826..349961,350223..350347,352382..352440,353949..354048,355010..355104,355200..355256,356974..357074,358553..358925))
location: region:337233-358925:-1
so has part: feature:358553-358925:-1:exon
so has part: feature:356974-357074:-1:exon
so has part: feature:355200-355256:-1:exon
so has part: feature:355010-355104:-1:exon
so has part: feature:353949-354048:-1:exon
so has part: feature:352382-352440:-1:exon
so has part: feature:350223-350347:-1:exon
so has part: feature:349826-349961:-1:exon
so has part: feature:348414-348501:-1:exon
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so has part: feature:347589-347649:-1:exon
so has part: feature:347420-347495:-1:exon
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so has part: feature:345811-345906:-1:exon
so has part: feature:345452-345574:-1:exon
so has part: feature:345120-345317:-1:exon
so has part: feature:343818-343922:-1:exon
so has part: feature:343672-343736:-1:exon
so has part: feature:343473-343566:-1:exon
so has part: feature:343186-343343:-1:exon
so has part: feature:341895-341944:-1:exon
so has part: feature:341692-341813:-1:exon
so has part: feature:340988-341095:-1:exon
so has part: feature:339790-339882:-1:exon
so has part: feature:339664-339697:-1:exon
so has part: feature:337756-338003:-1:exon
so has part: feature:337463-337612:-1:exon
so has part: feature:337233-337385:-1:exon

XP_023516043.1
type: Protein
SIO_000068: ncbiprotein

position:337233:-1
position: 337233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358925:-1
position: 358925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358553-358925:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:356974-357074:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:355200-355256:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:355010-355104:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:353949-354048:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:352382-352440:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:350223-350347:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:349826-349961:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:348414-348501:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:348255-348339:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:347589-347649:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:347420-347495:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:347233-347343:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:345811-345906:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:345452-345574:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:345120-345317:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:343818-343922:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:343672-343736:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:343473-343566:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:343186-343343:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:341895-341944:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:341692-341813:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:340988-341095:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:339790-339882:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:339664-339697:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:337756-338003:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:337463-337612:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:337233-337385:-1:exon

LOC111780024
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111780024
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SUPPRESSOR OF QUENCHING 1, chloroplastic isoform X3
translation: MESSIAFKYLSPSPPLASSARLCFLSSKLRGTRPTSVPCYDLEWRSKRFVFKQKMMVKASAKVEETSAKESAYKSEWGKVSAVLFDMDGVLCNSEDLSRRAGVDVFSELGVEVTPEDFVPFMGTGEANFLGGVASVKGVAGFSPEAAKKRFFEIYLEKYAKPNSGIGFPGALELITECKSKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFIAASKLLNVPTDECIVIEDALAGVQAAQAAKMRCIAVKTTLSDETLKTAGPSLIRNDIGNITIHDILSGGSDTSNEKIQGSQFLQTSEQISPRKDTSGIDAAAAVQDSEAVNDGSLSIGRLQGTRRDIVRYGSLGIALSCLVITITNWKAMQYTSPKAIWNLFFGVNQPSFQNNASSGGLVRDRIQRFIEYISEIETRETAPVVPEFPSKLDWLNSSPLRFRKDLKGKVVLLDFWTYCCINCMHVLPDLEYLEKKYNDKAFAVVGVHSAKFDNEKDLEAIRNAVLRYGITHPVVNDGDMFLWRELGINSWPTFAVVGPNGKLLAQISGEGRRKDLDDFVEAALLFYSEKKILDSRPLPLRLEKDSDPRLITSPLKFPGKLTIDVLNNRLFISDSNHNRIVVTDLSGNFLIQIGSTGEDGLRDGTFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVRETVHTLAGNGTKGSDYQGGKEGTSQLLNSPWDVCFEPISEKVYIAMAGQHQIWVHDTLNGVTKSFSGDGFERNLNGSSSSSSSFAQPSGLSVSPVIAWLVDLSEVYIADSESSSIRAVDLKTGGSRLLAGGDPIFSDNLFKIKRLDPVSKRVTTIAGTGKAGLKDGTALAAQLSEPSGITEAEGRLFISDTNNNVIRYLDLNNQEQPQLLTLELKGVQPPNPKPKSFKRLRKRSSDTQTIVVDGGSFREGNLSLKISLPEEYHFSKEARSKFIVETEPESALSIDPSDGYLSPDGFANLRFRRSSPAASLGRISCKVYYCKEDEVCLYKSLLFEVPFREELSEPSRAEITLAFEVKPKASTSSLPL
SIO_010081: LOC111780024
subclass of: SO_0000673
so part of: LOC111780024
location: complement(join(337233..337385,337463..337612,337756..338003,339664..339697,339790..339882,341692..341831,341895..341944,343186..343343,343473..343566,343672..343736,343818..343922,345120..345317,345452..345574,345811..345906,347233..347343,347420..347495,347589..347649,348255..348339,348414..348501,349826..349961,350223..350347,352382..352440,353949..354048,355010..355104,355200..355256,356974..357074,358553..358925))
location: region:337233-358925:-1
so has part: feature:358553-358925:-1:exon
so has part: feature:356974-357074:-1:exon
so has part: feature:355200-355256:-1:exon
so has part: feature:355010-355104:-1:exon
so has part: feature:353949-354048:-1:exon
so has part: feature:352382-352440:-1:exon
so has part: feature:350223-350347:-1:exon
so has part: feature:349826-349961:-1:exon
so has part: feature:348414-348501:-1:exon
so has part: feature:348255-348339:-1:exon
so has part: feature:347589-347649:-1:exon
so has part: feature:347420-347495:-1:exon
so has part: feature:347233-347343:-1:exon
so has part: feature:345811-345906:-1:exon
so has part: feature:345452-345574:-1:exon
so has part: feature:345120-345317:-1:exon
so has part: feature:343818-343922:-1:exon
so has part: feature:343672-343736:-1:exon
so has part: feature:343473-343566:-1:exon
so has part: feature:343186-343343:-1:exon
so has part: feature:341895-341944:-1:exon
so has part: feature:341692-341831:-1:exon
so has part: feature:339790-339882:-1:exon
so has part: feature:339664-339697:-1:exon
so has part: feature:337756-338003:-1:exon
so has part: feature:337463-337612:-1:exon
so has part: feature:337233-337385:-1:exon

XP_023516044.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:358553-358925:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:356974-357074:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:355200-355256:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:355010-355104:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:353949-354048:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:352382-352440:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:350223-350347:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:349826-349961:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:348414-348501:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:348255-348339:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:347589-347649:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:347420-347495:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:347233-347343:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:345811-345906:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:345452-345574:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:345120-345317:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:343818-343922:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:343672-343736:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:343473-343566:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:343186-343343:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:341895-341944:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:341692-341831:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:339790-339882:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:339664-339697:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:337756-338003:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:337463-337612:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:337233-337385:-1:exon

LOC111780024
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111780024
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SUPPRESSOR OF QUENCHING 1, chloroplastic isoform X1
translation: MESSIAFKYLSPSPPLASSARLCFLSSKLRGTRPTSVPCYDLEWRSKRFVFKQKMMVKASAKVEETSAKESAYKSEWGKVSAVLFDMDGVLCNSEDLSRRAGVDVFSELGVEVTPEDFVPFMGTGEANFLGGVASVKGVAGFSPEAAKKRFFEIYLEKYAKPNSGIGFPGALELITECKSKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFIAASKLLNVPTDECIVIEDALAGVQAAQAAKMRCIAVKTTLSDETLKTAGPSLIRNDIGNITIHDILSGGSDTSNEKIQGSQFLQTSEQISPRKDTSGIDAAAAVQDSEAVNDGSLSIGRLQGTRRDIVRYGSLGIALSCLVITITNWKAMQYTSPKAIWNLFFGVNQPSFQNNASSGGLVRDRIQRFIEYISEIETRETAPVVPEFPSKLDWLNSSPLRFRKDLKGKVVLLDFWTYCCINCMHVLPDLEYLEKKYNDKAFAVVGVHSAKFDNEKDLEAIRNAVLRYGITHPVVNDGDMFLWRELGINSWPTFAVVGPNGKLLAQISGEGRRKDLDDFVEAALLFYSEKKILDSRPLPLRLEKDSDPRLITSPLKFPGKLTIDVLNNRLFISDSNHNRIVVTDLSGNFLIQIGSTGEDGLRDGTFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVRETVHTLAGNGTKGSDYQGGKEGTSQLLNSPWDVCFEPISEKVYIAMAGQHQIWVHDTLNGVTKSFSGDGFERNLNGSSSSSSSFAQPSGLSVSPVIAWLVDLSEVYIADSESSSIRAVDLKTGGSRLLAGGDPIFSDNLFKFGDQDGVGSEVLLQHPLGVLCSKDGQIYIADSYNHKIKRLDPVSKRVTTIAGTGKAGLKDGTALAAQLSEPSGITEAEGRLFISDTNNNVIRYLDLNNQEQPQLLTLELKGVQPPNPKPKSFKRLRKRSSDTQTIVVDGGSFREGNLSLKISLPEEYHFSKEARSKFIVETEPESALSIDPSDGYLSPDGFANLRFRRSSPAASLGRISCKVYYCKEDEVCLYKSLLFEVPFREELSEPSRAEITLAFEVKPKASTSSLPL
SIO_010081: LOC111780024
subclass of: SO_0000673
so part of: LOC111780024
location: complement(join(337233..337385,337463..337612,337756..338003,339664..339697,339790..339882,340988..341095,341692..341831,341895..341944,343186..343343,343473..343566,343672..343736,343818..343922,345120..345317,345452..345574,345811..345906,347233..347343,347420..347495,347589..347649,348255..348339,348414..348501,349826..349961,350223..350347,352382..352440,353949..354048,355010..355104,355200..355256,356974..357074,358553..358925))
location: region:337233-358925:-1
so has part: feature:358553-358925:-1:exon
so has part: feature:356974-357074:-1:exon
so has part: feature:355200-355256:-1:exon
so has part: feature:355010-355104:-1:exon
so has part: feature:353949-354048:-1:exon
so has part: feature:352382-352440:-1:exon
so has part: feature:350223-350347:-1:exon
so has part: feature:349826-349961:-1:exon
so has part: feature:348414-348501:-1:exon
so has part: feature:348255-348339:-1:exon
so has part: feature:347589-347649:-1:exon
so has part: feature:347420-347495:-1:exon
so has part: feature:347233-347343:-1:exon
so has part: feature:345811-345906:-1:exon
so has part: feature:345452-345574:-1:exon
so has part: feature:345120-345317:-1:exon
so has part: feature:343818-343922:-1:exon
so has part: feature:343672-343736:-1:exon
so has part: feature:343473-343566:-1:exon
so has part: feature:343186-343343:-1:exon
so has part: feature:341895-341944:-1:exon
so has part: feature:341692-341831:-1:exon
so has part: feature:340988-341095:-1:exon
so has part: feature:339790-339882:-1:exon
so has part: feature:339664-339697:-1:exon
so has part: feature:337756-338003:-1:exon
so has part: feature:337463-337612:-1:exon
so has part: feature:337233-337385:-1:exon

XP_023516041.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:358553-358925:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:356974-357074:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:355200-355256:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:355010-355104:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:353949-354048:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:352382-352440:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:350223-350347:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:349826-349961:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:348414-348501:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:348255-348339:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:347589-347649:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:347420-347495:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:347233-347343:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:345811-345906:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:345452-345574:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:345120-345317:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:343818-343922:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:343672-343736:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:343473-343566:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:343186-343343:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:341895-341944:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:341692-341831:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:340988-341095:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:339790-339882:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:339664-339697:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:337756-338003:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:337463-337612:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:337233-337385:-1:exon

TRNAD-GUC
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAD-GUC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(364567..364638)
location: region:364567-364638:-1
so has part: feature:364567-364638:-1:exon
subclass of: SO_0000663

111780785
type: Gene
SIO_000068: ncbigene

position:364567:-1
position: 364567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:364638:-1
position: 364638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364567-364638:-1:exon

TRNAD-GUC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAD-GUC
product: tRNA-Asp
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA aspartic acid (anticodon GUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(364603..364605),aa:Asp,seq:gtc)
SIO_010081: TRNAD-GUC
subclass of: SO_0000673
so part of: TRNAD-GUC
location: complement(364567..364638)
location: region:364567-364638:-1
so has part: feature:364567-364638:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:364567-364638:-1:exon

LOC111780465
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780465
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(366445..366987)
location: region:366445-366987:-1
so has part: feature:366445-366987:-1:exon

111780465
type: Gene
SIO_000068: ncbigene

position:366445:-1
position: 366445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366987:-1
position: 366987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366445-366987:-1:exon

LOC111780465
type: Exon
subclass of: SO_0000147
RO_0002162: 3664
gene: LOC111780465
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC111780465
subclass of: SO_0000673
so part of: LOC111780465
location: complement(366445..366987)
location: region:366445-366987:-1
so has part: feature:366445-366987:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:366445-366987:-1:exon

LOC111779644
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111779644
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(367268..368272)
location: region:367268-368272:-1
so has part: feature:367268-368272:-1:exon

111779644
type: Gene
SIO_000068: ncbigene

position:367268:-1
position: 367268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368272:-1
position: 368272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367268-368272:-1:exon

LOC111779644
type: Exon
subclass of: SO_0000147
RO_0002162: 3664
gene: LOC111779644
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC111779644
subclass of: SO_0000673
so part of: LOC111779644
location: complement(367268..368272)
location: region:367268-368272:-1
so has part: feature:367268-368272:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:367268-368272:-1:exon

LOC111780670
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780670
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(377438..378583)
location: region:377438-378583:-1
so has part: feature:377438-378583:-1:exon

111780670
type: Gene
SIO_000068: ncbigene

position:377438:-1
position: 377438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:378583:-1
position: 378583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377438-378583:-1:exon

LOC111780670
type: Exon
subclass of: SO_0000147
RO_0002162: 3664
gene: LOC111780670
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111780670
subclass of: SO_0000673
so part of: LOC111780670
location: complement(377438..378583)
location: region:377438-378583:-1
so has part: feature:377438-378583:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:377438-378583:-1:exon

LOC111780466
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780466
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 379398..380548
location: region:379398-380548:1
so has part: feature:379398-380548:1:exon

111780466
type: Gene
SIO_000068: ncbigene

position:379398:1
position: 379398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380548:1
position: 380548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379398-380548:1:exon

LOC111780466
type: Exon
subclass of: SO_0000147
RO_0002162: 3664
gene: LOC111780466
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC111780466
subclass of: SO_0000673
so part of: LOC111780466
location: 379398..379415
location: region:379398-379415:1
so has part: feature:379398-379415:1:exon

position:379415:1
position: 379415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379398-379415:1:exon

LOC111780466
type: Exon
subclass of: SO_0000147
RO_0002162: 3664
gene: LOC111780466
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC111780466
subclass of: SO_0000673
so part of: LOC111780466
location: 379477..379665
location: region:379477-379665:1
so has part: feature:379477-379665:1:exon

position:379477:1
position: 379477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379665:1
position: 379665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379477-379665:1:exon

LOC111780466
type: Exon
subclass of: SO_0000147
RO_0002162: 3664
gene: LOC111780466
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC111780466
subclass of: SO_0000673
so part of: LOC111780466
location: 379732..380210
location: region:379732-380210:1
so has part: feature:379732-380210:1:exon

position:379732:1
position: 379732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380210:1
position: 380210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379732-380210:1:exon

LOC111780466
type: Exon
subclass of: SO_0000147
RO_0002162: 3664
gene: LOC111780466
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC111780466
subclass of: SO_0000673
so part of: LOC111780466
location: 380296..380548
location: region:380296-380548:1
so has part: feature:380296-380548:1:exon

position:380296:1
position: 380296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380296-380548:1:exon

LOC111780650
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780650
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 410269..414674
location: region:410269-414674:1
so has part: feature:410269-414674:1:exon
subclass of: SO_0000010

111780650
type: Gene
SIO_000068: ncbigene

position:410269:1
position: 410269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414674:1
position: 414674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:410269-414674:1:exon

LOC111780650
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111780650
product: uncharacterized LOC111780650
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_023661114.1
SIO_010081: LOC111780650
subclass of: SO_0000673
so part of: LOC111780650
location: join(410269..410425,412225..412527,412597..412773,414149..414255,414497..414674)
location: region:410269-414674:1
so has part: feature:410269-410425:1:exon
so has part: feature:412225-412527:1:exon
so has part: feature:412597-412773:1:exon
so has part: feature:414149-414255:1:exon
so has part: feature:414497-414674:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:410269-410425:1:exon

position:410425:1
position: 410425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:412225-412527:1:exon

position:412225:1
position: 412225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412527:1
position: 412527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:412597-412773:1:exon

position:412597:1
position: 412597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412773:1
position: 412773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:414149-414255:1:exon

position:414149:1
position: 414149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414255:1
position: 414255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:414497-414674:1:exon

position:414497:1
position: 414497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111780650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111780650
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111780650
translation: MDMKKGEESEKKMYFTSENGESSSFPIISGADKLDHFSKTGTLPEGEETIEVVLKLPALRLSSLLAAMELEKDTKISLPPPFTNLPSILTGHSLIPLPPTSEEQQYNNPSHERTITSGPSSSSSSELPQLVFNGVLALFLRVGSWQVVPKNDGDLVLKFDYRNKKVTWEIVREGPSKHKIEIDWSNIIGIEAAIEDHRQGILQLELQKPPRFYKEIESKPHKQPKWADESDFTDGRASLNRRYFAVFSPGVLGTHYKRLMKNKHLLEVSQKSFPTTQSPYFPQL
SIO_010081: LOC111780650
subclass of: SO_0000673
so part of: LOC111780650
location: join(410291..410425,412225..412527,412597..412773,414149..414255,414497..414629)
location: region:410291-414629:1
so has part: feature:410291-410425:1:exon
so has part: feature:412225-412527:1:exon
so has part: feature:412597-412773:1:exon
so has part: feature:414149-414255:1:exon
so has part: feature:414497-414629:1:exon

XP_023516882.1
type: Protein
SIO_000068: ncbiprotein

position:410291:1
position: 410291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414629:1
position: 414629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:410291-410425:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:412225-412527:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:412597-412773:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:414149-414255:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:414497-414629:1:exon

LOC111780388
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780388
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(439766..441355)
location: region:439766-441355:-1
so has part: feature:439766-441355:-1:exon
subclass of: SO_0000010

111780388
type: Gene
SIO_000068: ncbigene

position:439766:-1
position: 439766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:441355:-1
position: 441355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439766-441355:-1:exon

LOC111780388
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111780388
product: uncharacterized LOC111780388
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023660769.1
SIO_010081: LOC111780388
subclass of: SO_0000673
so part of: LOC111780388
location: complement(439766..441355)
location: region:439766-441355:-1
so has part: feature:439766-441355:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:439766-441355:-1:exon

LOC111780388
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111780388
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111780388
translation: MESQTPNPQRNSIADPQAELHCCINGESLDSTDADLSFEDVDSSCSTPYVSAPSSPGRGAVPAFFYSAPASPMHFVITKNPTSSSSSSASMDNHSSSFEFDFSARFGSNGRSSSMASMSSADELFHDGKIRPMKLSTHLELPLVPMLDLENGDGKGDGIVEFVRGRDLRLRDKFQRRRTRSMSPLRYSPIEWTESEYGDGINVECSVTENEISGECGVMEKVEEIASNSEVSTPSISASSSRSSSAGRSSKRWIFLKDFLYRSKSEGRSNNNFWSNISFHAKEKKSGGENQRIAKQKFINPLASRSSEGKKAKGAVGTKKDGAKKPSNGVGKRRVPPSPHERHYAANRAHSEEMKKKTYLPYRQGLLGCLGFSSKGYGAVNGFAKALNSVSSR
SIO_010081: LOC111780388
subclass of: SO_0000673
so part of: LOC111780388
location: complement(440138..441319)
location: region:440138-441319:-1
so has part: feature:440138-441319:-1:exon

XP_023516537.1
type: Protein
SIO_000068: ncbiprotein

position:440138:-1
position: 440138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:441319:-1
position: 441319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440138-441319:-1:exon

LOC111780626
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780626
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(450880..463728)
location: region:450880-463728:-1
so has part: feature:450880-463728:-1:exon
subclass of: SO_0000010

111780626
type: Gene
SIO_000068: ncbigene

position:450880:-1
position: 450880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:463728:-1
position: 463728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450880-463728:-1:exon

LOC111780626
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111780626
product: uncharacterized LOC111780626, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_023661073.1
SIO_010081: LOC111780626
subclass of: SO_0000673
so part of: LOC111780626
location: complement(join(450880..451143,451296..451415,452466..452540,452741..452877,453179..453311,453972..454156,457174..457261,457432..457516,457641..458322,458901..459069,463477..463728))
location: region:450880-463728:-1
so has part: feature:463477-463728:-1:exon
so has part: feature:458901-459069:-1:exon
so has part: feature:457641-458322:-1:exon
so has part: feature:457432-457516:-1:exon
so has part: feature:457174-457261:-1:exon
so has part: feature:453972-454156:-1:exon
so has part: feature:453179-453311:-1:exon
so has part: feature:452741-452877:-1:exon
so has part: feature:452466-452540:-1:exon
so has part: feature:451296-451415:-1:exon
so has part: feature:450880-451143:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:463477-463728:-1:exon

position:463477:-1
position: 463477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:458901-459069:-1:exon

position:458901:-1
position: 458901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459069:-1
position: 459069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:457641-458322:-1:exon

position:457641:-1
position: 457641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458322:-1
position: 458322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:457432-457516:-1:exon

position:457432:-1
position: 457432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457516:-1
position: 457516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:457174-457261:-1:exon

position:457174:-1
position: 457174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457261:-1
position: 457261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:453972-454156:-1:exon

position:453972:-1
position: 453972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:454156:-1
position: 454156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:453179-453311:-1:exon

position:453179:-1
position: 453179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:453311:-1
position: 453311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:452741-452877:-1:exon

position:452741:-1
position: 452741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:452877:-1
position: 452877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:452466-452540:-1:exon

position:452466:-1
position: 452466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:452540:-1
position: 452540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:451296-451415:-1:exon

position:451296:-1
position: 451296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451415:-1
position: 451415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:450880-451143:-1:exon

position:451143:-1
position: 451143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111780626
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111780626
product: uncharacterized LOC111780626, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_023661072.1
SIO_010081: LOC111780626
subclass of: SO_0000673
so part of: LOC111780626
location: complement(join(450880..451143,451296..451415,452466..452540,452741..452877,453179..453311,453972..454156,457174..457261,457432..457516,457641..458322,458901..459069,463416..463728))
location: region:450880-463728:-1
so has part: feature:463416-463728:-1:exon
so has part: feature:458901-459069:-1:exon
so has part: feature:457641-458322:-1:exon
so has part: feature:457432-457516:-1:exon
so has part: feature:457174-457261:-1:exon
so has part: feature:453972-454156:-1:exon
so has part: feature:453179-453311:-1:exon
so has part: feature:452741-452877:-1:exon
so has part: feature:452466-452540:-1:exon
so has part: feature:451296-451415:-1:exon
so has part: feature:450880-451143:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:463416-463728:-1:exon

position:463416:-1
position: 463416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:458901-459069:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:457641-458322:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:457432-457516:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:457174-457261:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:453972-454156:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:453179-453311:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:452741-452877:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:452466-452540:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:451296-451415:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:450880-451143:-1:exon

LOC111780626
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111780626
product: uncharacterized LOC111780626, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_023661074.1
SIO_010081: LOC111780626
subclass of: SO_0000673
so part of: LOC111780626
location: complement(join(450880..451143,451296..451415,452466..452540,452741..452877,453179..453311,453972..454156,457174..457261,457432..457516,457641..458322,458901..459069,461460..462417))
location: region:450880-462417:-1
so has part: feature:461460-462417:-1:exon
so has part: feature:458901-459069:-1:exon
so has part: feature:457641-458322:-1:exon
so has part: feature:457432-457516:-1:exon
so has part: feature:457174-457261:-1:exon
so has part: feature:453972-454156:-1:exon
so has part: feature:453179-453311:-1:exon
so has part: feature:452741-452877:-1:exon
so has part: feature:452466-452540:-1:exon
so has part: feature:451296-451415:-1:exon
so has part: feature:450880-451143:-1:exon

position:462417:-1
position: 462417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:461460-462417:-1:exon

position:461460:-1
position: 461460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:458901-459069:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:457641-458322:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:457432-457516:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:457174-457261:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:453972-454156:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:453179-453311:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:452741-452877:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:452466-452540:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:451296-451415:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:450880-451143:-1:exon

LOC111780626
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111780626
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111780626
translation: MGLDQTVAEPLDPIDQTHLAWKIAVHSLSDLSYISPVVFLYLLKECYIRGTLKATKKFRSLQQQVHLVLHNGPQPGPATFVIHCLYVLPIFGLYSEGFSHLITSAFQRFLKVVTTLTDLDKAKNLAAQLFVDIVGGFIKHDERIVVKILQVFDIQLTNIEKVRFDSKARNGCCSSSAKDFVEQYVSELVETQSYTTAVDVLEHFSIRQSGQSLLFSMLQNNEFKAAEKWATFMGRPMLCLLVQELMNRNKVKSAYGIVKTNGLQTEFPDVYQKCKESSLKNLAEKGCWDVAEAKTKSNRQFLEYLVYLALEAGYFEKVDELCNRYSLAGFLNIKEREGAYGQNHYLNLNQLITGDILWVDKADALHNAICHIEECKVIGIDCEWKPNYIKGRKPNKVSIMQIASEEKAFIFDLIKLYDDVPDILDNCLTRILQSSSILKLGYNFQCDIKQLSHSYGSLECFKHYDMLLDIQNVFKDHTGGLSGLAKKVLGAGLNKTRRNSDWEQRPLTVNQLEYAALDAIVLVHIFRHVGDQSQPSTTAEGQKRLEWKSFIVSHMDNPPKPRKKNRSNMEPKVATNM
SIO_010081: LOC111780626
subclass of: SO_0000673
so part of: LOC111780626
location: complement(join(451063..451143,451296..451415,452466..452540,452741..452877,453179..453311,453972..454156,457174..457261,457432..457516,457641..458322,458901..459048))
location: region:451063-459048:-1
so has part: feature:458901-459048:-1:exon
so has part: feature:457641-458322:-1:exon
so has part: feature:457432-457516:-1:exon
so has part: feature:457174-457261:-1:exon
so has part: feature:453972-454156:-1:exon
so has part: feature:453179-453311:-1:exon
so has part: feature:452741-452877:-1:exon
so has part: feature:452466-452540:-1:exon
so has part: feature:451296-451415:-1:exon
so has part: feature:451063-451143:-1:exon

XP_023516840.1
type: Protein
SIO_000068: ncbiprotein

position:451063:-1
position: 451063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459048:-1
position: 459048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458901-459048:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:457641-458322:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:457432-457516:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:457174-457261:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:453972-454156:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:453179-453311:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:452741-452877:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:452466-452540:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:451296-451415:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:451063-451143:-1:exon

LOC111780626
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111780626
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111780626
translation: MGLDQTVAEPLDPIDQTHLAWKIAVHSLSDLSYISPVVFLYLLKECYIRGTLKATKKFRSLQQQVHLVLHNGPQPGPATFVIHCLYVLPIFGLYSEGFSHLITSAFQRFLKVVTTLTDLDKAKNLAAQLFVDIVGGFIKHDERIVVKILQVFDIQLTNIEKVRFDSKARNGCCSSSAKDFVEQYVSELVETQSYTTAVDVLEHFSIRQSGQSLLFSMLQNNEFKAAEKWATFMGRPMLCLLVQELMNRNKVKSAYGIVKTNGLQTEFPDVYQKCKESSLKNLAEKGCWDVAEAKTKSNRQFLEYLVYLALEAGYFEKVDELCNRYSLAGFLNIKEREGAYGQNHYLNLNQLITGDILWVDKADALHNAICHIEECKVIGIDCEWKPNYIKGRKPNKVSIMQIASEEKAFIFDLIKLYDDVPDILDNCLTRILQSSSILKLGYNFQCDIKQLSHSYGSLECFKHYDMLLDIQNVFKDHTGGLSGLAKKVLGAGLNKTRRNSDWEQRPLTVNQLEYAALDAIVLVHIFRHVGDQSQPSTTAEGQKRLEWKSFIVSHMDNPPKPRKKNRSNMEPKVATNM
SIO_010081: LOC111780626
subclass of: SO_0000673
so part of: LOC111780626
location: complement(join(451063..451143,451296..451415,452466..452540,452741..452877,453179..453311,453972..454156,457174..457261,457432..457516,457641..458322,458901..459048))
location: region:451063-459048:-1
so has part: feature:458901-459048:-1:exon
so has part: feature:457641-458322:-1:exon
so has part: feature:457432-457516:-1:exon
so has part: feature:457174-457261:-1:exon
so has part: feature:453972-454156:-1:exon
so has part: feature:453179-453311:-1:exon
so has part: feature:452741-452877:-1:exon
so has part: feature:452466-452540:-1:exon
so has part: feature:451296-451415:-1:exon
so has part: feature:451063-451143:-1:exon

XP_023516841.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:458901-459048:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:457641-458322:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:457432-457516:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:457174-457261:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:453972-454156:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:453179-453311:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:452741-452877:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:452466-452540:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:451296-451415:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:451063-451143:-1:exon

LOC111780626
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111780626
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111780626
translation: MGLDQTVAEPLDPIDQTHLAWKIAVHSLSDLSYISPVVFLYLLKECYIRGTLKATKKFRSLQQQVHLVLHNGPQPGPATFVIHCLYVLPIFGLYSEGFSHLITSAFQRFLKVVTTLTDLDKAKNLAAQLFVDIVGGFIKHDERIVVKILQVFDIQLTNIEKVRFDSKARNGCCSSSAKDFVEQYVSELVETQSYTTAVDVLEHFSIRQSGQSLLFSMLQNNEFKAAEKWATFMGRPMLCLLVQELMNRNKVKSAYGIVKTNGLQTEFPDVYQKCKESSLKNLAEKGCWDVAEAKTKSNRQFLEYLVYLALEAGYFEKVDELCNRYSLAGFLNIKEREGAYGQNHYLNLNQLITGDILWVDKADALHNAICHIEECKVIGIDCEWKPNYIKGRKPNKVSIMQIASEEKAFIFDLIKLYDDVPDILDNCLTRILQSSSILKLGYNFQCDIKQLSHSYGSLECFKHYDMLLDIQNVFKDHTGGLSGLAKKVLGAGLNKTRRNSDWEQRPLTVNQLEYAALDAIVLVHIFRHVGDQSQPSTTAEGQKRLEWKSFIVSHMDNPPKPRKKNRSNMEPKVATNM
SIO_010081: LOC111780626
subclass of: SO_0000673
so part of: LOC111780626
location: complement(join(451063..451143,451296..451415,452466..452540,452741..452877,453179..453311,453972..454156,457174..457261,457432..457516,457641..458322,458901..459048))
location: region:451063-459048:-1
so has part: feature:458901-459048:-1:exon
so has part: feature:457641-458322:-1:exon
so has part: feature:457432-457516:-1:exon
so has part: feature:457174-457261:-1:exon
so has part: feature:453972-454156:-1:exon
so has part: feature:453179-453311:-1:exon
so has part: feature:452741-452877:-1:exon
so has part: feature:452466-452540:-1:exon
so has part: feature:451296-451415:-1:exon
so has part: feature:451063-451143:-1:exon

XP_023516842.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:458901-459048:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:457641-458322:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:457432-457516:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:457174-457261:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:453972-454156:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:453179-453311:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:452741-452877:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:452466-452540:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:451296-451415:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:451063-451143:-1:exon

LOC111780626
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 3664
gene: LOC111780626
product: uncharacterized LOC111780626, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XR_002812871.1
SIO_010081: LOC111780626
so part of: LOC111780626
location: complement(join(451311..451415,452466..452536,452741..452877,453179..453311,453972..454156,457174..457261,457432..457516,457641..458322,458901..459069,463416..463728))
location: region:451311-463728:-1
so has part: feature:463416-463728:-1:exon
so has part: feature:458901-459069:-1:exon
so has part: feature:457641-458322:-1:exon
so has part: feature:457432-457516:-1:exon
so has part: feature:457174-457261:-1:exon
so has part: feature:453972-454156:-1:exon
so has part: feature:453179-453311:-1:exon
so has part: feature:452741-452877:-1:exon
so has part: feature:452466-452536:-1:exon
so has part: feature:451311-451415:-1:exon

position:451311:-1
position: 451311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:463416-463728:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:458901-459069:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:457641-458322:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:457432-457516:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:457174-457261:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:453972-454156:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:453179-453311:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:452741-452877:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:452466-452536:-1:exon

position:452536:-1
position: 452536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:451311-451415:-1:exon

LOC111780467
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780467
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 475236..491433
location: region:475236-491433:1
so has part: feature:475236-491433:1:exon

111780467
type: Gene
SIO_000068: ncbigene

position:475236:1
position: 475236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491433:1
position: 491433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:475236-491433:1:exon

LOC111780467
type: Exon
subclass of: SO_0000147
RO_0002162: 3664
gene: LOC111780467
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111780467
subclass of: SO_0000673
so part of: LOC111780467
location: 475236..475336
location: region:475236-475336:1
so has part: feature:475236-475336:1:exon

position:475336:1
position: 475336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:475236-475336:1:exon

LOC111780467
type: Exon
subclass of: SO_0000147
RO_0002162: 3664
gene: LOC111780467
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111780467
subclass of: SO_0000673
so part of: LOC111780467
location: 475462..475540
location: region:475462-475540:1
so has part: feature:475462-475540:1:exon

position:475462:1
position: 475462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475540:1
position: 475540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:475462-475540:1:exon

LOC111780467
type: Exon
subclass of: SO_0000147
RO_0002162: 3664
gene: LOC111780467
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111780467
subclass of: SO_0000673
so part of: LOC111780467
location: 476657..476712
location: region:476657-476712:1
so has part: feature:476657-476712:1:exon

position:476657:1
position: 476657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476712:1
position: 476712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476657-476712:1:exon

LOC111780467
type: Exon
subclass of: SO_0000147
RO_0002162: 3664
gene: LOC111780467
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111780467
subclass of: SO_0000673
so part of: LOC111780467
location: 476806..477344
location: region:476806-477344:1
so has part: feature:476806-477344:1:exon

position:476806:1
position: 476806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:477344:1
position: 477344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476806-477344:1:exon

LOC111780467
type: Exon
subclass of: SO_0000147
RO_0002162: 3664
gene: LOC111780467
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111780467
subclass of: SO_0000673
so part of: LOC111780467
location: 478489..478652
location: region:478489-478652:1
so has part: feature:478489-478652:1:exon

position:478489:1
position: 478489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478652:1
position: 478652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:478489-478652:1:exon

LOC111780467
type: Exon
subclass of: SO_0000147
RO_0002162: 3664
gene: LOC111780467
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111780467
subclass of: SO_0000673
so part of: LOC111780467
location: 478974..479225
location: region:478974-479225:1
so has part: feature:478974-479225:1:exon

position:478974:1
position: 478974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479225:1
position: 479225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:478974-479225:1:exon

LOC111780467
type: Exon
subclass of: SO_0000147
RO_0002162: 3664
gene: LOC111780467
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111780467
subclass of: SO_0000673
so part of: LOC111780467
location: 479753..479843
location: region:479753-479843:1
so has part: feature:479753-479843:1:exon

position:479753:1
position: 479753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479843:1
position: 479843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:479753-479843:1:exon

LOC111780467
type: Exon
subclass of: SO_0000147
RO_0002162: 3664
gene: LOC111780467
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111780467
subclass of: SO_0000673
so part of: LOC111780467
location: 479922..480045
location: region:479922-480045:1
so has part: feature:479922-480045:1:exon

position:479922:1
position: 479922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480045:1
position: 480045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:479922-480045:1:exon

LOC111780467
type: Exon
subclass of: SO_0000147
RO_0002162: 3664
gene: LOC111780467
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111780467
subclass of: SO_0000673
so part of: LOC111780467
location: 490875..491433
location: region:490875-491433:1
so has part: feature:490875-491433:1:exon

position:490875:1
position: 490875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:490875-491433:1:exon

LOC111779761
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111779761
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(502324..505382)
location: region:502324-505382:-1
so has part: feature:502324-505382:-1:exon
subclass of: SO_0000010

111779761
type: Gene
SIO_000068: ncbigene

position:502324:-1
position: 502324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505382:-1
position: 505382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:502324-505382:-1:exon

LOC111779761
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111779761
product: calmodulin-binding protein 60 C-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_023659885.1
SIO_010081: LOC111779761
subclass of: SO_0000673
so part of: LOC111779761
location: complement(join(502324..502597,502684..502844,504035..504570,504659..504720,505087..505150,505261..505382))
location: region:502324-505382:-1
so has part: feature:505261-505382:-1:exon
so has part: feature:505087-505150:-1:exon
so has part: feature:504659-504720:-1:exon
so has part: feature:504035-504570:-1:exon
so has part: feature:502684-502844:-1:exon
so has part: feature:502324-502597:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:505261-505382:-1:exon

position:505261:-1
position: 505261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:505087-505150:-1:exon

position:505087:-1
position: 505087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505150:-1
position: 505150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:504659-504720:-1:exon

position:504659:-1
position: 504659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:504720:-1
position: 504720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:504035-504570:-1:exon

position:504035:-1
position: 504035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:504570:-1
position: 504570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:502684-502844:-1:exon

position:502684:-1
position: 502684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502844:-1
position: 502844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:502324-502597:-1:exon

position:502597:-1
position: 502597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111779761
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111779761
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calmodulin-binding protein 60 C-like
translation: MEPMNKKRDFHCLLHSHDDQEQPLKRINFLTLSWIVADFSSPNTLARFETFIRPVVREEVETKVVANNPRQSCSLRTSQHEAEFVVGGGGSKMVKLKLCFLNKLLPTIFTTNDIESDNGERLQIALMDVTDDYNHKIVGAAHPLSSLLVEVVVLDGEFDGERAHWSVEDFERGIVTPRLGGRPYLDGNDKRIRLKNGVLWINNLSFIINSKRTRTGSFRLGVKVIDDEILGNNNYLRIREAVSNSFKVMEHRSKGNNKHPPLMGEDEVWRLKGISKTGQYYERLSSEGIRTVESFVKAYKRDPRYLRKLLGDRVPDKTWKTIEFQVIEFHAEAMRGAEVADQNQTFLDELEDDCSQMLSWNK
SIO_010081: LOC111779761
subclass of: SO_0000673
so part of: LOC111779761
location: complement(join(502433..502597,502684..502844,504035..504570,504659..504720,505087..505150,505261..505361))
location: region:502433-505361:-1
so has part: feature:505261-505361:-1:exon
so has part: feature:505087-505150:-1:exon
so has part: feature:504659-504720:-1:exon
so has part: feature:504035-504570:-1:exon
so has part: feature:502684-502844:-1:exon
so has part: feature:502433-502597:-1:exon

XP_023515653.1
type: Protein
SIO_000068: ncbiprotein

position:502433:-1
position: 502433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505361:-1
position: 505361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:505261-505361:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:505087-505150:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:504659-504720:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:504035-504570:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:502684-502844:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:502433-502597:-1:exon

LOC111780344
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780344
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 521117..522434
location: region:521117-522434:1
so has part: feature:521117-522434:1:exon
subclass of: SO_0000011

111780344
type: Gene
SIO_000068: ncbigene

position:521117:1
position: 521117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522434:1
position: 522434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:521117-522434:1:exon

LOC111780344
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3664
nc RNA class: lncRNA
gene: LOC111780344
product: uncharacterized LOC111780344
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_002812834.1
SIO_010081: LOC111780344
subclass of: SO_0000673
so part of: LOC111780344
location: join(521117..521363,521441..522434)
location: region:521117-522434:1
so has part: feature:521117-521363:1:exon
so has part: feature:521441-522434:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:521117-521363:1:exon

position:521363:1
position: 521363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:521441-522434:1:exon

position:521441:1
position: 521441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111780580
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780580
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 537025..542709
location: region:537025-542709:1
so has part: feature:537025-542709:1:exon
subclass of: SO_0000010

111780580
type: Gene
SIO_000068: ncbigene

position:537025:1
position: 537025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542709:1
position: 542709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:537025-542709:1:exon

LOC111780580
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111780580
product: probable protein phosphatase 2C 73
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023661012.1
SIO_010081: LOC111780580
subclass of: SO_0000673
so part of: LOC111780580
location: join(537025..537067,539011..539270,540334..540642,541702..541825,541909..542132,542208..542709)
location: region:537025-542709:1
so has part: feature:537025-537067:1:exon
so has part: feature:539011-539270:1:exon
so has part: feature:540334-540642:1:exon
so has part: feature:541702-541825:1:exon
so has part: feature:541909-542132:1:exon
so has part: feature:542208-542709:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:537025-537067:1:exon

position:537067:1
position: 537067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:539011-539270:1:exon

position:539011:1
position: 539011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539270:1
position: 539270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:540334-540642:1:exon

position:540334:1
position: 540334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540642:1
position: 540642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:541702-541825:1:exon

position:541702:1
position: 541702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541825:1
position: 541825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:541909-542132:1:exon

position:541909:1
position: 541909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542132:1
position: 542132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:542208-542709:1:exon

position:542208:1
position: 542208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111780580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111780580
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable protein phosphatase 2C 73
translation: MEHLFMKLKNWKNSENASAAEAMAKSAKKKDLIIRGSGSIHIDGSSNFVSSFSKRGEKGINQDCCIVWEEFGCQKDMMFCGVFDGHGPWGHFVAKKVRESMPIALLYNWQEALVQASPHSHLELNLAKTHLKFNLWEHSYIQACAMVDRELERHRKIDTFHSGTTALSIVRQGDTIIIANLGDSRAVLATTSNDGNSMPTPIQLTIDFKPNLPQEAERIAQCNGRVFCLQDEPGTHRIWLPNGETPGLSLSRSFGDFCVKHFGLISMPDVTQRSVTNQDLFVVLATDGIWDVVSNQEAVQIVHSTVNREKSARHLVDYATGAWKRRRPGIAADDMSVVVLFLHSSPLHHQPLALM
SIO_010081: LOC111780580
subclass of: SO_0000673
so part of: LOC111780580
location: join(539064..539270,540334..540642,541702..541825,541909..542132,542208..542411)
location: region:539064-542411:1
so has part: feature:539064-539270:1:exon
so has part: feature:540334-540642:1:exon
so has part: feature:541702-541825:1:exon
so has part: feature:541909-542132:1:exon
so has part: feature:542208-542411:1:exon

XP_023516780.1
type: Protein
SIO_000068: ncbiprotein

position:539064:1
position: 539064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542411:1
position: 542411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:539064-539270:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:540334-540642:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:541702-541825:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:541909-542132:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:542208-542411:1:exon

LOC111780299
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780299
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 547371..548892
location: region:547371-548892:1
so has part: feature:547371-548892:1:exon
subclass of: SO_0000010

111780299
type: Gene
SIO_000068: ncbigene

position:547371:1
position: 547371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548892:1
position: 548892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:547371-548892:1:exon

LOC111780299
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111780299
product: 60S ribosomal protein L39-1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_023660663.1
SIO_010081: LOC111780299
subclass of: SO_0000673
so part of: LOC111780299
location: join(547371..547491,548265..548308,548435..548538,548632..548892)
location: region:547371-548892:1
so has part: feature:547371-547491:1:exon
so has part: feature:548265-548308:1:exon
so has part: feature:548435-548538:1:exon
so has part: feature:548632-548892:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:547371-547491:1:exon

position:547491:1
position: 547491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:548265-548308:1:exon

position:548265:1
position: 548265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548308:1
position: 548308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:548435-548538:1:exon

position:548435:1
position: 548435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548538:1
position: 548538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:548632-548892:1:exon

position:548632:1
position: 548632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111780299
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111780299
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L39-1
translation: MPSHKTFIIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF
SIO_010081: LOC111780299
subclass of: SO_0000673
so part of: LOC111780299
location: join(548306..548308,548435..548538,548632..548680)
location: region:548306-548680:1
so has part: feature:548306-548308:1:exon
so has part: feature:548435-548538:1:exon
so has part: feature:548632-548680:1:exon

XP_023516431.1
type: Protein
SIO_000068: ncbiprotein

position:548306:1
position: 548306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548680:1
position: 548680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548306-548308:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:548435-548538:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:548632-548680:1:exon

LOC111779696
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111779696
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 552494..563742
location: region:552494-563742:1
so has part: feature:552494-563742:1:exon
subclass of: SO_0000010

111779696
type: Gene
SIO_000068: ncbigene

position:552494:1
position: 552494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:563742:1
position: 563742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:552494-563742:1:exon

LOC111779696
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111779696
product: eukaryotic translation initiation factor 3 subunit A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023659813.1
SIO_010081: LOC111779696
subclass of: SO_0000673
so part of: LOC111779696
location: join(552494..552544,553289..553386,554191..554672,555662..555877,556014..556382,556468..556497,556877..557104,557232..557393,557679..557900,557953..558165,558257..558463,559133..559213,562331..562532,562905..563742)
location: region:552494-563742:1
so has part: feature:552494-552544:1:exon
so has part: feature:553289-553386:1:exon
so has part: feature:554191-554672:1:exon
so has part: feature:555662-555877:1:exon
so has part: feature:556014-556382:1:exon
so has part: feature:556468-556497:1:exon
so has part: feature:556877-557104:1:exon
so has part: feature:557232-557393:1:exon
so has part: feature:557679-557900:1:exon
so has part: feature:557953-558165:1:exon
so has part: feature:558257-558463:1:exon
so has part: feature:559133-559213:1:exon
so has part: feature:562331-562532:1:exon
so has part: feature:562905-563742:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:552494-552544:1:exon

position:552544:1
position: 552544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:553289-553386:1:exon

position:553289:1
position: 553289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553386:1
position: 553386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:554191-554672:1:exon

position:554191:1
position: 554191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554672:1
position: 554672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:555662-555877:1:exon

position:555662:1
position: 555662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555877:1
position: 555877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:556014-556382:1:exon

position:556014:1
position: 556014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556382:1
position: 556382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:556468-556497:1:exon

position:556468:1
position: 556468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556497:1
position: 556497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:556877-557104:1:exon

position:556877:1
position: 556877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557104:1
position: 557104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:557232-557393:1:exon

position:557232:1
position: 557232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557393:1
position: 557393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:557679-557900:1:exon

position:557679:1
position: 557679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557900:1
position: 557900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:557953-558165:1:exon

position:557953:1
position: 557953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558165:1
position: 558165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:558257-558463:1:exon

position:558257:1
position: 558257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558463:1
position: 558463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:559133-559213:1:exon

position:559133:1
position: 559133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:559213:1
position: 559213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:562331-562532:1:exon

position:562331:1
position: 562331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562532:1
position: 562532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:562905-563742:1:exon

position:562905:1
position: 562905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111779696
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111779696
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 3 subunit A-like
translation: MASFLKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDMRKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKTYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDISTPETLQLYLDTRFEQLKVATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISKSNLYHAYAWLKLFSLQKSFNKNLSQKDLQLIASSVLLAALAVSPYDSKHGASHLELEHEKERNLRMANLIGFNLDSKLESRDVLSRANLLSELVSKGVLSCATQEVKDLYHLLEHEFFPLDLATKLQPLLNKISKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPFFDFSAVEKISVDAVKQNFIAMKVDHSRNIVLFGTLGIESDGLRDHLAVLAESLNKARAMIYPPVRKVSKTGEILPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLLKITEEAEQKRLAAEYEQRKNQRLRREMEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKMTKQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAATLIEAAFQQRLLEERLIHERDQQLEVELSKQRHEGDLKEKNRLARMLESKKIFQERVINLRQEEFSRRRVEREEQIRQIIHARKAERDAKRKKIFYVRREEERIRILREEEEARKREEAERRKREEAERKAKLDEIAEKQRQRERELEEKERRRKEMLFGGGAPADAPSRPHVAPVSQPLESGAAAAPAAAAAAAAAPAPAKYVPRFRRTESSSPNAPAPESDRWGSSRSDNRPSQPDSWRSDERRSAFGSSRSSWSSSRGPNRGSSDR
SIO_010081: LOC111779696
subclass of: SO_0000673
so part of: LOC111779696
location: join(553341..553386,554191..554672,555662..555877,556014..556382,556468..556497,556877..557104,557232..557393,557679..557900,557953..558165,558257..558463,559133..559213,562331..562532,562905..563362)
location: region:553341-563362:1
so has part: feature:553341-553386:1:exon
so has part: feature:554191-554672:1:exon
so has part: feature:555662-555877:1:exon
so has part: feature:556014-556382:1:exon
so has part: feature:556468-556497:1:exon
so has part: feature:556877-557104:1:exon
so has part: feature:557232-557393:1:exon
so has part: feature:557679-557900:1:exon
so has part: feature:557953-558165:1:exon
so has part: feature:558257-558463:1:exon
so has part: feature:559133-559213:1:exon
so has part: feature:562331-562532:1:exon
so has part: feature:562905-563362:1:exon

XP_023515581.1
type: Protein
SIO_000068: ncbiprotein

position:553341:1
position: 553341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:563362:1
position: 563362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:553341-553386:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:554191-554672:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:555662-555877:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:556014-556382:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:556468-556497:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:556877-557104:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:557232-557393:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:557679-557900:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:557953-558165:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:558257-558463:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:559133-559213:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:562331-562532:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:562905-563362:1:exon

LOC111780071
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780071
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 569315..573630
location: region:569315-573630:1
so has part: feature:569315-573630:1:exon
subclass of: SO_0000010

111780071
type: Gene
SIO_000068: ncbigene

position:569315:1
position: 569315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573630:1
position: 573630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:569315-573630:1:exon

LOC111780071
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111780071
product: single-stranded DNA-binding protein, mitochondrial
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_023660347.1
SIO_010081: LOC111780071
subclass of: SO_0000673
so part of: LOC111780071
location: join(569315..569452,569772..569953,571541..571749,571818..571918,573122..573181,573285..573630)
location: region:569315-573630:1
so has part: feature:569315-569452:1:exon
so has part: feature:569772-569953:1:exon
so has part: feature:571541-571749:1:exon
so has part: feature:571818-571918:1:exon
so has part: feature:573122-573181:1:exon
so has part: feature:573285-573630:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:569315-569452:1:exon

position:569452:1
position: 569452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:569772-569953:1:exon

position:569772:1
position: 569772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:569953:1
position: 569953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:571541-571749:1:exon

position:571541:1
position: 571541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571749:1
position: 571749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:571818-571918:1:exon

position:571818:1
position: 571818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571918:1
position: 571918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:573122-573181:1:exon

position:573122:1
position: 573122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573181:1
position: 573181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:573285-573630:1:exon

position:573285:1
position: 573285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111780071
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111780071
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: single-stranded DNA-binding protein, mitochondrial
translation: MNAVAMRFLKDFRISSSFVASRQTSSKLWLSTSASGSGIDVEKNNGDEEEYDDFFNDKIELQPQGVDPRRGWGFRGVHKAIICGRIGQAPVQKILRNGRTITIFTVGTGGMFDQRIVEAKDLPKPAQWHRIAVHNEPLGAYAVQQLVKNASVYVEGDIETRVYNDSINGEVKNVPEICVRRDGKIRLLKAGESASNICLDDLKEGLFQNET
SIO_010081: LOC111780071
subclass of: SO_0000673
so part of: LOC111780071
location: join(569398..569452,569772..569953,571541..571749,571818..571918,573122..573181,573285..573313)
location: region:569398-573313:1
so has part: feature:569398-569452:1:exon
so has part: feature:569772-569953:1:exon
so has part: feature:571541-571749:1:exon
so has part: feature:571818-571918:1:exon
so has part: feature:573122-573181:1:exon
so has part: feature:573285-573313:1:exon

XP_023516115.1
type: Protein
SIO_000068: ncbiprotein

position:569398:1
position: 569398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573313:1
position: 573313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:569398-569452:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:569772-569953:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:571541-571749:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:571818-571918:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:573122-573181:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:573285-573313:1:exon

LOC111780748
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780748
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(572296..572406)
location: region:572296-572406:-1
so has part: feature:572296-572406:-1:exon

111780748
type: Gene
SIO_000068: ncbigene

position:572296:-1
position: 572296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572406:-1
position: 572406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:572296-572406:-1:exon

LOC111780748
type: Exon
subclass of: SO_0000147
RO_0002162: 3664
gene: LOC111780748
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC111780748
subclass of: SO_0000673
so part of: LOC111780748
location: complement(572296..572406)
location: region:572296-572406:-1
so has part: feature:572296-572406:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:572296-572406:-1:exon

LOC111780070
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780070
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(574544..579052)
location: region:574544-579052:-1
so has part: feature:574544-579052:-1:exon
subclass of: SO_0000010

111780070
type: Gene
SIO_000068: ncbigene

position:574544:-1
position: 574544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579052:-1
position: 579052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:574544-579052:-1:exon

LOC111780070
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111780070
product: probable protein phosphatase 2C 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_023660344.1
SIO_010081: LOC111780070
subclass of: SO_0000673
so part of: LOC111780070
location: complement(join(574544..574944,575977..576185,577077..577202,577290..577397,577482..577699,577793..577964,578154..578411,578794..579052))
location: region:574544-579052:-1
so has part: feature:578794-579052:-1:exon
so has part: feature:578154-578411:-1:exon
so has part: feature:577793-577964:-1:exon
so has part: feature:577482-577699:-1:exon
so has part: feature:577290-577397:-1:exon
so has part: feature:577077-577202:-1:exon
so has part: feature:575977-576185:-1:exon
so has part: feature:574544-574944:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:578794-579052:-1:exon

position:578794:-1
position: 578794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:578154-578411:-1:exon

position:578154:-1
position: 578154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578411:-1
position: 578411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:577793-577964:-1:exon

position:577793:-1
position: 577793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577964:-1
position: 577964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:577482-577699:-1:exon

position:577482:-1
position: 577482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577699:-1
position: 577699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:577290-577397:-1:exon

position:577290:-1
position: 577290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577397:-1
position: 577397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:577077-577202:-1:exon

position:577077:-1
position: 577077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577202:-1
position: 577202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:575977-576185:-1:exon

position:575977:-1
position: 575977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:576185:-1
position: 576185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:574544-574944:-1:exon

position:574944:-1
position: 574944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111780070
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111780070
product: probable protein phosphatase 2C 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_023660345.1
SIO_010081: LOC111780070
subclass of: SO_0000673
so part of: LOC111780070
location: complement(join(574544..574944,575977..576185,577077..577202,577290..577397,577482..577699,577793..577964,578154..578411,578639..578734))
location: region:574544-578734:-1
so has part: feature:578639-578734:-1:exon
so has part: feature:578154-578411:-1:exon
so has part: feature:577793-577964:-1:exon
so has part: feature:577482-577699:-1:exon
so has part: feature:577290-577397:-1:exon
so has part: feature:577077-577202:-1:exon
so has part: feature:575977-576185:-1:exon
so has part: feature:574544-574944:-1:exon

position:578734:-1
position: 578734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:578639-578734:-1:exon

position:578639:-1
position: 578639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:578154-578411:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:577793-577964:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:577482-577699:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:577290-577397:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:577077-577202:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:575977-576185:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:574544-574944:-1:exon

LOC111780070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111780070
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable protein phosphatase 2C 5
translation: MSQTEVSRIKPPLVPLATLIGRELRNEKVEKPFVKYGQAALAKKGEDYFLIKLDCHRIPGNTSTTFSVFAIFDGHNGISAAIFAKEHLLGNVLSAIPQGVSREKWLQALPRALVAGFVKTDIEFQQKGETSGTTVTFVVIDGWTVTVASVGDSRCILDAQGGVVSLLTVDHRLEENEEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEYIVPIPHVKQVKLSNAGGRLIIASDGIWDTLSSDMAAKSCRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSEQPILIPSTPRKKQNVLTSLFGKSANKLSAVGVVEELFEEGSAMLSERLGKDFPSDPNSGIFKCAVCQADQPANENLSMNSGPFFSPSSKPWEGPFLCAKCRRKKDAMEGKRPIKPTITV
SIO_010081: LOC111780070
subclass of: SO_0000673
so part of: LOC111780070
location: complement(join(574725..574944,575977..576185,577077..577202,577290..577397,577482..577699,577793..577964,578154..578363))
location: region:574725-578363:-1
so has part: feature:578154-578363:-1:exon
so has part: feature:577793-577964:-1:exon
so has part: feature:577482-577699:-1:exon
so has part: feature:577290-577397:-1:exon
so has part: feature:577077-577202:-1:exon
so has part: feature:575977-576185:-1:exon
so has part: feature:574725-574944:-1:exon

XP_023516112.1
type: Protein
SIO_000068: ncbiprotein

position:574725:-1
position: 574725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578363:-1
position: 578363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:578154-578363:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:577793-577964:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:577482-577699:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:577290-577397:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:577077-577202:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:575977-576185:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:574725-574944:-1:exon

LOC111780070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111780070
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable protein phosphatase 2C 5
translation: MSQTEVSRIKPPLVPLATLIGRELRNEKVEKPFVKYGQAALAKKGEDYFLIKLDCHRIPGNTSTTFSVFAIFDGHNGISAAIFAKEHLLGNVLSAIPQGVSREKWLQALPRALVAGFVKTDIEFQQKGETSGTTVTFVVIDGWTVTVASVGDSRCILDAQGGVVSLLTVDHRLEENEEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEYIVPIPHVKQVKLSNAGGRLIIASDGIWDTLSSDMAAKSCRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSEQPILIPSTPRKKQNVLTSLFGKSANKLSAVGVVEELFEEGSAMLSERLGKDFPSDPNSGIFKCAVCQADQPANENLSMNSGPFFSPSSKPWEGPFLCAKCRRKKDAMEGKRPIKPTITV
SIO_010081: LOC111780070
subclass of: SO_0000673
so part of: LOC111780070
location: complement(join(574725..574944,575977..576185,577077..577202,577290..577397,577482..577699,577793..577964,578154..578363))
location: region:574725-578363:-1
so has part: feature:578154-578363:-1:exon
so has part: feature:577793-577964:-1:exon
so has part: feature:577482-577699:-1:exon
so has part: feature:577290-577397:-1:exon
so has part: feature:577077-577202:-1:exon
so has part: feature:575977-576185:-1:exon
so has part: feature:574725-574944:-1:exon

XP_023516113.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:578154-578363:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:577793-577964:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:577482-577699:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:577290-577397:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:577077-577202:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:575977-576185:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:574725-574944:-1:exon

LOC111780468
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780468
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 581141..581776
location: region:581141-581776:1
so has part: feature:581141-581776:1:exon
subclass of: SO_0000010

111780468
type: Gene
SIO_000068: ncbigene

position:581141:1
position: 581141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:581776:1
position: 581776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:581141-581776:1:exon

LOC111780468
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111780468
product: uncharacterized LOC111780468
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_023660888.1
SIO_010081: LOC111780468
subclass of: SO_0000673
so part of: LOC111780468
location: 581141..581776
location: region:581141-581776:1
so has part: feature:581141-581776:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:581141-581776:1:exon

LOC111780468
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111780468
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111780468
translation: METILNRDTAKQIWDSMNQKYQGSTRVEFEVLQMKEGESVDAYFARTFTIPNKMKIHGKNMKSVGIIEKILKSMNSRFDYVICSIEESNNLDTLTIDELQSSLMVHEQILNGCVGDEQALNVTYDNRIGGRGGDRAHEAFRGRGRGNGRNRHLFNKTTVECYKYQLGHSRYECPQWKKEANYAELEEEEEMLLMSYVALNQSRREDVRLVP
SIO_010081: LOC111780468
subclass of: SO_0000673
so part of: LOC111780468
location: 581141..581776
location: region:581141-581776:1
so has part: feature:581141-581776:1:exon

XP_023516656.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:581141-581776:1:exon

LOC111780421
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780421
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(595898..605000)
location: region:595898-605000:-1
so has part: feature:595898-605000:-1:exon
subclass of: SO_0000010

111780421
type: Gene
SIO_000068: ncbigene

position:595898:-1
position: 595898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:605000:-1
position: 605000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:595898-605000:-1:exon

LOC111780421
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111780421
product: kinesin-like protein KIN-14G
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023660815.1
SIO_010081: LOC111780421
subclass of: SO_0000673
so part of: LOC111780421
location: complement(join(595898..596196,596782..597308,597507..597695,598125..598288,598382..598635,598937..599367,599453..599559,599641..599817,599909..600004,600576..600657,600739..600999,601097..601174,602106..602174,602263..602334,602433..602672,602772..602915,603741..603907,604741..605000))
location: region:595898-605000:-1
so has part: feature:604741-605000:-1:exon
so has part: feature:603741-603907:-1:exon
so has part: feature:602772-602915:-1:exon
so has part: feature:602433-602672:-1:exon
so has part: feature:602263-602334:-1:exon
so has part: feature:602106-602174:-1:exon
so has part: feature:601097-601174:-1:exon
so has part: feature:600739-600999:-1:exon
so has part: feature:600576-600657:-1:exon
so has part: feature:599909-600004:-1:exon
so has part: feature:599641-599817:-1:exon
so has part: feature:599453-599559:-1:exon
so has part: feature:598937-599367:-1:exon
so has part: feature:598382-598635:-1:exon
so has part: feature:598125-598288:-1:exon
so has part: feature:597507-597695:-1:exon
so has part: feature:596782-597308:-1:exon
so has part: feature:595898-596196:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:604741-605000:-1:exon

position:604741:-1
position: 604741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:603741-603907:-1:exon

position:603741:-1
position: 603741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:603907:-1
position: 603907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:602772-602915:-1:exon

position:602772:-1
position: 602772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:602915:-1
position: 602915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:602433-602672:-1:exon

position:602433:-1
position: 602433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:602672:-1
position: 602672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:602263-602334:-1:exon

position:602263:-1
position: 602263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:602334:-1
position: 602334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:602106-602174:-1:exon

position:602106:-1
position: 602106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:602174:-1
position: 602174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:601097-601174:-1:exon

position:601097:-1
position: 601097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:601174:-1
position: 601174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:600739-600999:-1:exon

position:600739:-1
position: 600739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:600999:-1
position: 600999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:600576-600657:-1:exon

position:600576:-1
position: 600576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:600657:-1
position: 600657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:599909-600004:-1:exon

position:599909:-1
position: 599909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:600004:-1
position: 600004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:599641-599817:-1:exon

position:599641:-1
position: 599641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:599817:-1
position: 599817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:599453-599559:-1:exon

position:599453:-1
position: 599453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:599559:-1
position: 599559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:598937-599367:-1:exon

position:598937:-1
position: 598937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:599367:-1
position: 599367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:598382-598635:-1:exon

position:598382:-1
position: 598382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598635:-1
position: 598635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:598125-598288:-1:exon

position:598125:-1
position: 598125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598288:-1
position: 598288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:597507-597695:-1:exon

position:597507:-1
position: 597507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597695:-1
position: 597695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:596782-597308:-1:exon

position:596782:-1
position: 596782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597308:-1
position: 597308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:595898-596196:-1:exon

position:596196:-1
position: 596196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111780421
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111780421
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 3 bases at 3 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(599140..599142),aa:OTHER)
transl except: (pos:complement(599137..599139),aa:OTHER)
transl except: (pos:complement(599110..599112),aa:OTHER)
product: LOW QUALITY PROTEIN: kinesin-like protein KIN-14G
translation: MATGQVLPFSIASVVEDLLQQHGVHLRDIELASKKAEEDSLRRYEAAGWLRKTVGVVGGKDLPAEPSEEEFRLGLRSGIILCNVLNKVQPGAVSKIVEGPCDSVIIPDGAALSAYQYLENVRNFLVAIEELGLPTFEASDLEQGGKSTRVVNSVLALKSYSTWKKGGGNGVWRFGGTDKSPTSSIDMVPKNSEPATNSLTRTSSTCDSFCLELSSSDDPSNETGSSRPLQLLLSQLLSDKQLDEIPSIVECMICKVMGEFEHRLTTHNNKMKTSQEDMAESISDKYPPQITSADGTMEEETTSSPEEISSPEATSCTEEISSLEATSCPEVESCRETERCSEAESCLETKSENQESNDHRDEELERKILRRQMLLEQQQRNIEMLKSVLGETKAGMQILQMKYQEEFNNIGKRMHSVAYAASEYRRVVEENRKLYNQVQDLKGNIRVYCRVRPFLGGHSNRPSIVDRIDQGNMSIMTPSKNGKEGRKSFSFNKVFGPSATQGEVFSDTRPLIRSVLDGYNVCIFAYGQTGSGKTHTMSGPTELTEDTVGVNYRALSDLFVLSQQRRQTISYDISVQMLEIYNDQIRDLLVTDSSNRRYPFLFPFCISLYSFIXXSSGYNDCPXLVITLEVRNSSQNGINVPDACLVPVSSTEDVINLMNLGQNNRAVSSTAMNDRSSRSHSCLTVHVQGRDLATGATLRGCMHLVDLAGSERVDKSEVIGDRLKEAQHINKSLSALGDVIASLAQKTAHVPYRNSKLTQLLQDSLGGQAKTLMFIHISPEPEALGETLSTLKFAERVATVELGAARVNKDSTESKELKEQIASRKVALVKKDSETEQNCRPSSPEKSRMKTFLSSPSLPSWKSVVEMSVNRTNSSEDVRNPPEVQNKSNLNVKRRSLDPRDILPSSPWPPLGATPVNRREEEKESVSSDGEDKVMVNKNENISSDETLTGCWDVNTKLPETFGQKFVVNPSKVYPETLLNNPSVNKKETQEPDVQRNQVEMVSTDDSDDHDAANSETSEPEVIWQSSLPLPRPSSIPNGLGSKTKKTAIPKQARSPEMRSFIPSLIPSPSRKPQAGVAQPVPKTSKPAAVSVEGGKRRGGYTK
SIO_010081: LOC111780421
subclass of: SO_0000673
so part of: LOC111780421
location: complement(join(596061..596196,596782..597308,597507..597695,598125..598288,598382..598635,598937..599367,599453..599559,599641..599817,599909..600004,600576..600657,600739..600999,601097..601174,602106..602174,602263..602334,602433..602672,602772..602915,603741..603907,604741..604858))
location: region:596061-604858:-1
so has part: feature:604741-604858:-1:exon
so has part: feature:603741-603907:-1:exon
so has part: feature:602772-602915:-1:exon
so has part: feature:602433-602672:-1:exon
so has part: feature:602263-602334:-1:exon
so has part: feature:602106-602174:-1:exon
so has part: feature:601097-601174:-1:exon
so has part: feature:600739-600999:-1:exon
so has part: feature:600576-600657:-1:exon
so has part: feature:599909-600004:-1:exon
so has part: feature:599641-599817:-1:exon
so has part: feature:599453-599559:-1:exon
so has part: feature:598937-599367:-1:exon
so has part: feature:598382-598635:-1:exon
so has part: feature:598125-598288:-1:exon
so has part: feature:597507-597695:-1:exon
so has part: feature:596782-597308:-1:exon
so has part: feature:596061-596196:-1:exon

XP_023516583.1
type: Protein
SIO_000068: ncbiprotein

position:596061:-1
position: 596061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604858:-1
position: 604858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:604741-604858:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:603741-603907:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:602772-602915:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:602433-602672:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:602263-602334:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:602106-602174:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:601097-601174:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:600739-600999:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:600576-600657:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:599909-600004:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:599641-599817:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:599453-599559:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:598937-599367:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:598382-598635:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:598125-598288:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:597507-597695:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:596782-597308:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:596061-596196:-1:exon

LOC111780497
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780497
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(610198..614509)
location: region:610198-614509:-1
so has part: feature:610198-614509:-1:exon
subclass of: SO_0000010

111780497
type: Gene
SIO_000068: ncbigene

position:610198:-1
position: 610198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614509:-1
position: 614509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:610198-614509:-1:exon

LOC111780497
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111780497
product: protein DEHYDRATION-INDUCED 19 homolog 3-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_023660920.1
SIO_010081: LOC111780497
subclass of: SO_0000673
so part of: LOC111780497
location: complement(join(610198..610496,610854..611107,611516..611593,612487..612629,614159..614509))
location: region:610198-614509:-1
so has part: feature:614159-614509:-1:exon
so has part: feature:612487-612629:-1:exon
so has part: feature:611516-611593:-1:exon
so has part: feature:610854-611107:-1:exon
so has part: feature:610198-610496:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:614159-614509:-1:exon

position:614159:-1
position: 614159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:612487-612629:-1:exon

position:612487:-1
position: 612487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:612629:-1
position: 612629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:611516-611593:-1:exon

position:611516:-1
position: 611516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:611593:-1
position: 611593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:610854-611107:-1:exon

position:610854:-1
position: 610854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:611107:-1
position: 611107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:610198-610496:-1:exon

position:610496:-1
position: 610496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111780497
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111780497
product: protein DEHYDRATION-INDUCED 19 homolog 3-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_023660919.1
SIO_010081: LOC111780497
subclass of: SO_0000673
so part of: LOC111780497
location: complement(join(610198..610496,610854..611107,611516..611593,612487..612644,614159..614503))
location: region:610198-614503:-1
so has part: feature:614159-614503:-1:exon
so has part: feature:612487-612644:-1:exon
so has part: feature:611516-611593:-1:exon
so has part: feature:610854-611107:-1:exon
so has part: feature:610198-610496:-1:exon

position:614503:-1
position: 614503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:614159-614503:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:612487-612644:-1:exon

position:612644:-1
position: 612644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:611516-611593:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:610854-611107:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:610198-610496:-1:exon

LOC111780497
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111780497
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein DEHYDRATION-INDUCED 19 homolog 3-like isoform X2
translation: MDAESWTARLSSASKRYQSALLSRSGLGMFMGFEELEGDDDIREEFPCPFCSEFFDIVGLCCHIDEEHPIEARNGVCPVCDMRVGVDMVAHISLQHGNIFKMQRKRKSRKGGSHSTLSLLRKELQEGNLQSLFGGSSGLFTSNAAPDPLLSSFILPMADDYGSVQPHLSAEPNSMKCNSPDKSLERSIPSSPLSVQDEEEKRKRCAFVQGLVMSTILDDNL
SIO_010081: LOC111780497
subclass of: SO_0000673
so part of: LOC111780497
location: complement(join(610388..610496,610854..611107,611516..611593,612487..612629,614159..614240))
location: region:610388-614240:-1
so has part: feature:614159-614240:-1:exon
so has part: feature:612487-612629:-1:exon
so has part: feature:611516-611593:-1:exon
so has part: feature:610854-611107:-1:exon
so has part: feature:610388-610496:-1:exon

XP_023516688.1
type: Protein
SIO_000068: ncbiprotein

position:610388:-1
position: 610388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614240:-1
position: 614240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:614159-614240:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:612487-612629:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:611516-611593:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:610854-611107:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:610388-610496:-1:exon

LOC111780497
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111780497
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein DEHYDRATION-INDUCED 19 homolog 3-like isoform X1
translation: MDAESWTARLSSASKRYQSALLSRSGLAQHSSGMFMGFEELEGDDDIREEFPCPFCSEFFDIVGLCCHIDEEHPIEARNGVCPVCDMRVGVDMVAHISLQHGNIFKMQRKRKSRKGGSHSTLSLLRKELQEGNLQSLFGGSSGLFTSNAAPDPLLSSFILPMADDYGSVQPHLSAEPNSMKCNSPDKSLERSIPSSPLSVQDEEEKRKRCAFVQGLVMSTILDDNL
SIO_010081: LOC111780497
subclass of: SO_0000673
so part of: LOC111780497
location: complement(join(610388..610496,610854..611107,611516..611593,612487..612644,614159..614240))
location: region:610388-614240:-1
so has part: feature:614159-614240:-1:exon
so has part: feature:612487-612644:-1:exon
so has part: feature:611516-611593:-1:exon
so has part: feature:610854-611107:-1:exon
so has part: feature:610388-610496:-1:exon

XP_023516687.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:614159-614240:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:612487-612644:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:611516-611593:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:610854-611107:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:610388-610496:-1:exon

TRNAT-AGU
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAT-AGU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 620904..620977
location: region:620904-620977:1
so has part: feature:620904-620977:1:exon
subclass of: SO_0000663

111780775
type: Gene
SIO_000068: ncbigene

position:620904:1
position: 620904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:620977:1
position: 620977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:620904-620977:1:exon

TRNAT-AGU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAT-AGU
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA threonine (anticodon AGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:620938..620940,aa:Thr,seq:agt)
SIO_010081: TRNAT-AGU
subclass of: SO_0000673
so part of: TRNAT-AGU
location: 620904..620977
location: region:620904-620977:1
so has part: feature:620904-620977:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:620904-620977:1:exon

TRNAT-AGU
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAT-AGU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 621868..621941
location: region:621868-621941:1
so has part: feature:621868-621941:1:exon
subclass of: SO_0000663

111780786
type: Gene
SIO_000068: ncbigene

position:621868:1
position: 621868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:621941:1
position: 621941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:621868-621941:1:exon

TRNAT-AGU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAT-AGU
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA threonine (anticodon AGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:621902..621904,aa:Thr,seq:agt)
SIO_010081: TRNAT-AGU
subclass of: SO_0000673
so part of: TRNAT-AGU
location: 621868..621941
location: region:621868-621941:1
so has part: feature:621868-621941:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:621868-621941:1:exon

LOC111779679
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111779679
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(623874..626054)
location: region:623874-626054:-1
so has part: feature:623874-626054:-1:exon
subclass of: SO_0000010

111779679
type: Gene
SIO_000068: ncbigene

position:623874:-1
position: 623874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:626054:-1
position: 626054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623874-626054:-1:exon

LOC111779679
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111779679
product: exonuclease DPD1, chloroplastic/mitochondrial
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_023659787.1
SIO_010081: LOC111779679
subclass of: SO_0000673
so part of: LOC111779679
location: complement(join(623874..624295,624384..624589,624697..625352,625910..626054))
location: region:623874-626054:-1
so has part: feature:625910-626054:-1:exon
so has part: feature:624697-625352:-1:exon
so has part: feature:624384-624589:-1:exon
so has part: feature:623874-624295:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:625910-626054:-1:exon

position:625910:-1
position: 625910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:624697-625352:-1:exon

position:624697:-1
position: 624697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:625352:-1
position: 625352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:624384-624589:-1:exon

position:624384:-1
position: 624384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:624589:-1
position: 624589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:623874-624295:-1:exon

position:624295:-1
position: 624295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111779679
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111779679
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exonuclease DPD1, chloroplastic/mitochondrial
translation: MITAPMCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQNKRWTRKSMSTKAGRKAKTDPSSKPSNIRNEILEESVSTSCTISINKSEKNGTQKLQCCNIQETITKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAVVHGITSRMVSRPDVPRMKELIPILLQFIKSRQKPDGYVLLVAHNARTFDVPFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKIKKISLQALREYYNIPLVGSAHRAMSDVRTLSLILQRLTFDLKLGIPDLIERSFTTSDLINKKKN
SIO_010081: LOC111779679
subclass of: SO_0000673
so part of: LOC111779679
location: complement(join(624090..624295,624384..624589,624697..625283))
location: region:624090-625283:-1
so has part: feature:624697-625283:-1:exon
so has part: feature:624384-624589:-1:exon
so has part: feature:624090-624295:-1:exon

XP_023515555.1
type: Protein
SIO_000068: ncbiprotein

position:624090:-1
position: 624090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:625283:-1
position: 625283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:624697-625283:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:624384-624589:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:624090-624295:-1:exon

LOC111779670
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111779670
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(657352..658275)
location: region:657352-658275:-1
so has part: feature:657352-658275:-1:exon
subclass of: SO_0000010

111779670
type: Gene
SIO_000068: ncbigene

position:657352:-1
position: 657352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:658275:-1
position: 658275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:657352-658275:-1:exon

LOC111779670
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111779670
product: uncharacterized LOC111779670
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_023659778.1
SIO_010081: LOC111779670
subclass of: SO_0000673
so part of: LOC111779670
location: complement(join(657352..657687,657764..657914,657995..658090,658177..658275))
location: region:657352-658275:-1
so has part: feature:658177-658275:-1:exon
so has part: feature:657995-658090:-1:exon
so has part: feature:657764-657914:-1:exon
so has part: feature:657352-657687:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:658177-658275:-1:exon

position:658177:-1
position: 658177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:657995-658090:-1:exon

position:657995:-1
position: 657995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:658090:-1
position: 658090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:657764-657914:-1:exon

position:657764:-1
position: 657764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:657914:-1
position: 657914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:657352-657687:-1:exon

position:657687:-1
position: 657687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111779670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111779670
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111779670
translation: MMMVANAFECQSYPIFEPSSEVYLSLNNVSGDEAFNEGLDILEQNNLEYAGESPRMYLTEDDFGYRLFELAGLPSLLTSEAPASYDAAAATTMQALTPNTINDI
SIO_010081: LOC111779670
subclass of: SO_0000673
so part of: LOC111779670
location: complement(join(657587..657687,657764..657914,657995..658057))
location: region:657587-658057:-1
so has part: feature:657995-658057:-1:exon
so has part: feature:657764-657914:-1:exon
so has part: feature:657587-657687:-1:exon

XP_023515546.1
type: Protein
SIO_000068: ncbiprotein

position:657587:-1
position: 657587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:658057:-1
position: 658057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:657995-658057:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:657764-657914:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:657587-657687:-1:exon

LOC111780574
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780574
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(659141..662657)
location: region:659141-662657:-1
so has part: feature:659141-662657:-1:exon
subclass of: SO_0000010

111780574
type: Gene
SIO_000068: ncbigene

position:659141:-1
position: 659141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:662657:-1
position: 662657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:659141-662657:-1:exon

LOC111780574
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111780574
product: calmodulin-binding protein 60 C-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_023661008.1
SIO_010081: LOC111780574
subclass of: SO_0000673
so part of: LOC111780574
location: complement(join(659141..659476,659616..659703,659784..659879,659966..660129,660226..660731,661439..661500,661589..661670,662392..662657))
location: region:659141-662657:-1
so has part: feature:662392-662657:-1:exon
so has part: feature:661589-661670:-1:exon
so has part: feature:661439-661500:-1:exon
so has part: feature:660226-660731:-1:exon
so has part: feature:659966-660129:-1:exon
so has part: feature:659784-659879:-1:exon
so has part: feature:659616-659703:-1:exon
so has part: feature:659141-659476:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:662392-662657:-1:exon

position:662392:-1
position: 662392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:661589-661670:-1:exon

position:661589:-1
position: 661589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:661670:-1
position: 661670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:661439-661500:-1:exon

position:661439:-1
position: 661439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:661500:-1
position: 661500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:660226-660731:-1:exon

position:660226:-1
position: 660226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:660731:-1
position: 660731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:659966-660129:-1:exon

position:659966:-1
position: 659966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:660129:-1
position: 660129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:659784-659879:-1:exon

position:659784:-1
position: 659784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:659879:-1
position: 659879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:659616-659703:-1:exon

position:659616:-1
position: 659616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:659703:-1
position: 659703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:659141-659476:-1:exon

position:659476:-1
position: 659476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111780574
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111780574
product: calmodulin-binding protein 60 C-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_023661007.1
SIO_010081: LOC111780574
subclass of: SO_0000673
so part of: LOC111780574
location: complement(join(659141..659476,659553..659703,659784..659879,659966..660129,660226..660731,661439..661500,661589..661670,662392..662657))
location: region:659141-662657:-1
so has part: feature:662392-662657:-1:exon
so has part: feature:661589-661670:-1:exon
so has part: feature:661439-661500:-1:exon
so has part: feature:660226-660731:-1:exon
so has part: feature:659966-660129:-1:exon
so has part: feature:659784-659879:-1:exon
so has part: feature:659553-659703:-1:exon
so has part: feature:659141-659476:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:662392-662657:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:661589-661670:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:661439-661500:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:660226-660731:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:659966-660129:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:659784-659879:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:659553-659703:-1:exon

position:659553:-1
position: 659553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:659141-659476:-1:exon

LOC111780574
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111780574
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calmodulin-binding protein 60 C-like isoform X2
translation: MDAKGKGRAKAKAKMPPNDDHNPNPKRTRPSSSRTKAGTVAEDDRSLVVFLSRLQPLLSDLVHKEVKNALQTHVDPLLKSLRERKEMGEEAIVEGGIEKFKLVFCNQPANTIFTNNEIKAENGEAVRVAIYDATTNAIVRTGPLSSVLVGLVLLDGDYDETNRSLSELKRNILSPRDGKRPLLVGDGIKLILENGFASIKCVCITDNSSWMKSKKFRLGVMIIDENILAMYPTIGAAVSQPFRAMDHRGEVNKKHHPPSIEDEVWRLEGIGKDGAYHKNLSSHGIKNVGAFVLKYQEIGPTALKKLLGIKVPKKTWMMMVANAFECQSYPIFEPSSEVYLSLNNVSGDEAFNEGLDILEQNNLEYAGLPSLLTSEAPASYDAAAATTMQALTPNTINDI
SIO_010081: LOC111780574
subclass of: SO_0000673
so part of: LOC111780574
location: complement(join(659376..659476,659616..659703,659784..659879,659966..660129,660226..660731,661439..661500,661589..661670,662392..662492))
location: region:659376-662492:-1
so has part: feature:662392-662492:-1:exon
so has part: feature:661589-661670:-1:exon
so has part: feature:661439-661500:-1:exon
so has part: feature:660226-660731:-1:exon
so has part: feature:659966-660129:-1:exon
so has part: feature:659784-659879:-1:exon
so has part: feature:659616-659703:-1:exon
so has part: feature:659376-659476:-1:exon

XP_023516776.1
type: Protein
SIO_000068: ncbiprotein

position:659376:-1
position: 659376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:662492:-1
position: 662492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662392-662492:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:661589-661670:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:661439-661500:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:660226-660731:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:659966-660129:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:659784-659879:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:659616-659703:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:659376-659476:-1:exon

LOC111780574
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111780574
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calmodulin-binding protein 60 C-like isoform X1
translation: MDAKGKGRAKAKAKMPPNDDHNPNPKRTRPSSSRTKAGTVAEDDRSLVVFLSRLQPLLSDLVHKEVKNALQTHVDPLLKSLRERKEMGEEAIVEGGIEKFKLVFCNQPANTIFTNNEIKAENGEAVRVAIYDATTNAIVRTGPLSSVLVGLVLLDGDYDETNRSLSELKRNILSPRDGKRPLLVGDGIKLILENGFASIKCVCITDNSSWMKSKKFRLGVMIIDENILAMYPTIGAAVSQPFRAMDHRGEVNKKHHPPSIEDEVWRLEGIGKDGAYHKNLSSHGIKNVGAFVLKYQEIGPTALKKLLGIKVPKKTWMMMVANAFECQSYPIFEPSSEVYLSLNNVSGDEAFNEGLDILEQNNLEYAGESPRMYLTEDDFGYRLFELAGLPSLLTSEAPASYDAAAATTMQALTPNTINDI
SIO_010081: LOC111780574
subclass of: SO_0000673
so part of: LOC111780574
location: complement(join(659376..659476,659553..659703,659784..659879,659966..660129,660226..660731,661439..661500,661589..661670,662392..662492))
location: region:659376-662492:-1
so has part: feature:662392-662492:-1:exon
so has part: feature:661589-661670:-1:exon
so has part: feature:661439-661500:-1:exon
so has part: feature:660226-660731:-1:exon
so has part: feature:659966-660129:-1:exon
so has part: feature:659784-659879:-1:exon
so has part: feature:659553-659703:-1:exon
so has part: feature:659376-659476:-1:exon

XP_023516775.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:662392-662492:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:661589-661670:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:661439-661500:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:660226-660731:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:659966-660129:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:659784-659879:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:659553-659703:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:659376-659476:-1:exon

LOC111780636
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780636
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(675850..677259)
location: region:675850-677259:-1
so has part: feature:675850-677259:-1:exon
subclass of: SO_0000011

111780636
type: Gene
SIO_000068: ncbigene

position:675850:-1
position: 675850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:677259:-1
position: 677259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:675850-677259:-1:exon

LOC111780636
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3664
nc RNA class: lncRNA
gene: LOC111780636
product: uncharacterized LOC111780636
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_002812874.1
SIO_010081: LOC111780636
subclass of: SO_0000673
so part of: LOC111780636
location: complement(join(675850..676343,676534..676707,677095..677259))
location: region:675850-677259:-1
so has part: feature:677095-677259:-1:exon
so has part: feature:676534-676707:-1:exon
so has part: feature:675850-676343:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:677095-677259:-1:exon

position:677095:-1
position: 677095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:676534-676707:-1:exon

position:676534:-1
position: 676534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:676707:-1
position: 676707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:675850-676343:-1:exon

position:676343:-1
position: 676343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111780528
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780528
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(685076..688734)
location: region:685076-688734:-1
so has part: feature:685076-688734:-1:exon
subclass of: SO_0000010

111780528
type: Gene
SIO_000068: ncbigene

position:685076:-1
position: 685076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:688734:-1
position: 688734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:685076-688734:-1:exon

LOC111780528
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111780528
product: calmodulin-binding protein 60 G-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_023660954.1
SIO_010081: LOC111780528
subclass of: SO_0000673
so part of: LOC111780528
location: complement(join(685076..685408,685486..685636,685715..685807,686017..686180,686266..686771,688461..688734))
location: region:685076-688734:-1
so has part: feature:688461-688734:-1:exon
so has part: feature:686266-686771:-1:exon
so has part: feature:686017-686180:-1:exon
so has part: feature:685715-685807:-1:exon
so has part: feature:685486-685636:-1:exon
so has part: feature:685076-685408:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:688461-688734:-1:exon

position:688461:-1
position: 688461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:686266-686771:-1:exon

position:686266:-1
position: 686266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:686771:-1
position: 686771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:686017-686180:-1:exon

position:686017:-1
position: 686017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:686180:-1
position: 686180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:685715-685807:-1:exon

position:685715:-1
position: 685715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685807:-1
position: 685807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:685486-685636:-1:exon

position:685486:-1
position: 685486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685636:-1
position: 685636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:685076-685408:-1:exon

position:685408:-1
position: 685408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111780528
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111780528
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calmodulin-binding protein 60 G-like
translation: MDVKGKSKMPPNDDDSPNPKRTRPSSSSGGRREGGEEAIIEGGVEKFKLVFCNQPANTIFTNNLIKAENGEAVRVAIYDATTNAIIRTGPLSSAPVGLVLLDGDYDETNHTLSEFNRNILSPRHEKRPLLVGSDIKLILENGFASITCVSITDNSSWMKSKKFRLGAKIFDENILAMFPTIGVAVSQPFRVMDHRGEVNKKHHPPSREDEVWRLEGIGKDGAYHKNLSLHGINTVDDFLRTYYAIGSDPLKKLLGNKVPRKTWMMMVENALECQRPINEPSSEAYLSANTVMGDEAFNEGFDILEQTNLDYEYESSQMYFNDDDFGYGIAGFDDLSTLFNGGTPASYDAAAATAMQALTPNTINDI
SIO_010081: LOC111780528
subclass of: SO_0000673
so part of: LOC111780528
location: complement(join(685308..685408,685486..685636,685715..685807,686017..686180,686266..686771,688461..688546))
location: region:685308-688546:-1
so has part: feature:688461-688546:-1:exon
so has part: feature:686266-686771:-1:exon
so has part: feature:686017-686180:-1:exon
so has part: feature:685715-685807:-1:exon
so has part: feature:685486-685636:-1:exon
so has part: feature:685308-685408:-1:exon

XP_023516722.1
type: Protein
SIO_000068: ncbiprotein

position:685308:-1
position: 685308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:688546:-1
position: 688546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:688461-688546:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:686266-686771:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:686017-686180:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:685715-685807:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:685486-685636:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:685308-685408:-1:exon

LOC111779637
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111779637
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(707075..708275)
location: region:707075-708275:-1
so has part: feature:707075-708275:-1:exon
subclass of: SO_0000010

111779637
type: Gene
SIO_000068: ncbigene

position:707075:-1
position: 707075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:708275:-1
position: 708275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:707075-708275:-1:exon

LOC111779637
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111779637
product: calmodulin-binding protein 60 C-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_023659729.1
SIO_010081: LOC111779637
subclass of: SO_0000673
so part of: LOC111779637
location: complement(join(707075..707196,707287..707346,707435..707576,707657..707752,707992..708155,708225..708275))
location: region:707075-708275:-1
so has part: feature:708225-708275:-1:exon
so has part: feature:707992-708155:-1:exon
so has part: feature:707657-707752:-1:exon
so has part: feature:707435-707576:-1:exon
so has part: feature:707287-707346:-1:exon
so has part: feature:707075-707196:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:708225-708275:-1:exon

position:708225:-1
position: 708225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:707992-708155:-1:exon

position:707992:-1
position: 707992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:708155:-1
position: 708155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:707657-707752:-1:exon

position:707657:-1
position: 707657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:707752:-1
position: 707752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:707435-707576:-1:exon

position:707435:-1
position: 707435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:707576:-1
position: 707576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:707287-707346:-1:exon

position:707287:-1
position: 707287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:707346:-1
position: 707346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:707075-707196:-1:exon

position:707196:-1
position: 707196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111779637
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111779637
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calmodulin-binding protein 60 C-like
translation: MDHRGEVNKKHHPPSREDELWRLEGIRKDGIYHKNLSSYGIKNVDDFLLEYQKIGPERLRKLLGNKVLDKIWMTMVKHAFQCQSYTIYEPSSEAYLPATNIMVDEAFNDGLHVVEQNNLDYEYESLGMYSTTDDFGYKLGDLSPLFIGNDFRDDFGYRLADLPPLFIGEASTSYEAATATTMHTLTPNTIKDL
SIO_010081: LOC111779637
subclass of: SO_0000673
so part of: LOC111779637
location: complement(join(707096..707196,707287..707346,707435..707576,707657..707752,707992..708155,708225..708243))
location: region:707096-708243:-1
so has part: feature:708225-708243:-1:exon
so has part: feature:707992-708155:-1:exon
so has part: feature:707657-707752:-1:exon
so has part: feature:707435-707576:-1:exon
so has part: feature:707287-707346:-1:exon
so has part: feature:707096-707196:-1:exon

XP_023515497.1
type: Protein
SIO_000068: ncbiprotein

position:707096:-1
position: 707096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:708243:-1
position: 708243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:708225-708243:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:707992-708155:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:707657-707752:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:707435-707576:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:707287-707346:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:707096-707196:-1:exon

LOC111780658
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780658
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 719226..720702
location: region:719226-720702:1
so has part: feature:719226-720702:1:exon
subclass of: SO_0000011

111780658
type: Gene
SIO_000068: ncbigene

position:719226:1
position: 719226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:720702:1
position: 720702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:719226-720702:1:exon

LOC111780658
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3664
nc RNA class: lncRNA
gene: LOC111780658
product: uncharacterized LOC111780658
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002812876.1
SIO_010081: LOC111780658
subclass of: SO_0000673
so part of: LOC111780658
location: join(719226..719446,719569..719625,720343..720702)
location: region:719226-720702:1
so has part: feature:719226-719446:1:exon
so has part: feature:719569-719625:1:exon
so has part: feature:720343-720702:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:719226-719446:1:exon

position:719446:1
position: 719446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:719569-719625:1:exon

position:719569:1
position: 719569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:719625:1
position: 719625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:720343-720702:1:exon

position:720343:1
position: 720343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111780097
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780097
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 778189..784101
location: region:778189-784101:1
so has part: feature:778189-784101:1:exon
subclass of: SO_0000010

111780097
type: Gene
SIO_000068: ncbigene

position:778189:1
position: 778189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:784101:1
position: 784101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:778189-784101:1:exon

LOC111780097
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111780097
product: glycine-rich domain-containing protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_023660377.1
SIO_010081: LOC111780097
subclass of: SO_0000673
so part of: LOC111780097
location: join(778189..778481,778586..778703,779805..780188,781011..781283,781374..781894,782016..782140,783243..783400,783481..784101)
location: region:778189-784101:1
so has part: feature:778189-778481:1:exon
so has part: feature:778586-778703:1:exon
so has part: feature:779805-780188:1:exon
so has part: feature:781011-781283:1:exon
so has part: feature:781374-781894:1:exon
so has part: feature:782016-782140:1:exon
so has part: feature:783243-783400:1:exon
so has part: feature:783481-784101:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:778189-778481:1:exon

position:778481:1
position: 778481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:778586-778703:1:exon

position:778586:1
position: 778586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:778703:1
position: 778703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:779805-780188:1:exon

position:779805:1
position: 779805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:780188:1
position: 780188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:781011-781283:1:exon

position:781011:1
position: 781011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:781283:1
position: 781283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:781374-781894:1:exon

position:781374:1
position: 781374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:781894:1
position: 781894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:782016-782140:1:exon

position:782016:1
position: 782016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:782140:1
position: 782140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:783243-783400:1:exon

position:783243:1
position: 783243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:783400:1
position: 783400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:783481-784101:1:exon

position:783481:1
position: 783481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111780097
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111780097
product: glycine-rich domain-containing protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_023660378.1
SIO_010081: LOC111780097
subclass of: SO_0000673
so part of: LOC111780097
location: join(778189..778481,778586..778703,779805..779923,780056..780188,781011..781283,781374..781894,782016..782140,783243..783400,783481..784101)
location: region:778189-784101:1
so has part: feature:778189-778481:1:exon
so has part: feature:778586-778703:1:exon
so has part: feature:779805-779923:1:exon
so has part: feature:780056-780188:1:exon
so has part: feature:781011-781283:1:exon
so has part: feature:781374-781894:1:exon
so has part: feature:782016-782140:1:exon
so has part: feature:783243-783400:1:exon
so has part: feature:783481-784101:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:778189-778481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:778586-778703:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:779805-779923:1:exon

position:779923:1
position: 779923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:780056-780188:1:exon

position:780056:1
position: 780056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:781011-781283:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:781374-781894:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:782016-782140:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:783243-783400:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:783481-784101:1:exon

LOC111780097
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111780097
product: glycine-rich domain-containing protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_023660380.1
SIO_010081: LOC111780097
subclass of: SO_0000673
so part of: LOC111780097
location: join(778189..778481,778586..778703,781011..781283,781374..781894,782016..782140,783243..783400,783481..784101)
location: region:778189-784101:1
so has part: feature:778189-778481:1:exon
so has part: feature:778586-778703:1:exon
so has part: feature:781011-781283:1:exon
so has part: feature:781374-781894:1:exon
so has part: feature:782016-782140:1:exon
so has part: feature:783243-783400:1:exon
so has part: feature:783481-784101:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:778189-778481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:778586-778703:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:781011-781283:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:781374-781894:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:782016-782140:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:783243-783400:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:783481-784101:1:exon

LOC111780097
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111780097
product: glycine-rich domain-containing protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_023660381.1
SIO_010081: LOC111780097
subclass of: SO_0000673
so part of: LOC111780097
location: join(778189..778481,778586..778703,779805..780188,781011..781283,781374..781894,782016..782140,783481..783667)
location: region:778189-783667:1
so has part: feature:778189-778481:1:exon
so has part: feature:778586-778703:1:exon
so has part: feature:779805-780188:1:exon
so has part: feature:781011-781283:1:exon
so has part: feature:781374-781894:1:exon
so has part: feature:782016-782140:1:exon
so has part: feature:783481-783667:1:exon

position:783667:1
position: 783667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:778189-778481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:778586-778703:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:779805-780188:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:781011-781283:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:781374-781894:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:782016-782140:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:783481-783667:1:exon

LOC111780097
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111780097
product: glycine-rich domain-containing protein 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_023660382.1
SIO_010081: LOC111780097
subclass of: SO_0000673
so part of: LOC111780097
location: join(778189..778481,778586..778703,779805..780188,781011..781283,781374..781894,782016..782140,783238..783400)
location: region:778189-783400:1
so has part: feature:778189-778481:1:exon
so has part: feature:778586-778703:1:exon
so has part: feature:779805-780188:1:exon
so has part: feature:781011-781283:1:exon
so has part: feature:781374-781894:1:exon
so has part: feature:782016-782140:1:exon
so has part: feature:783238-783400:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:778189-778481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:778586-778703:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:779805-780188:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:781011-781283:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:781374-781894:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:782016-782140:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:783238-783400:1:exon

position:783238:1
position: 783238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111780097
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111780097
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycine-rich domain-containing protein 1 isoform X1
translation: MSSDRPISEFSASMSARSLGDMSELGSIQIGVDIISAVRRNLGFLRTVADSHWLHCESTLSEAIRRYEELWMPLISDLMVAGASPPMILPPLDVEWVWFCHTLNPVNYKHYCETRFLKLIGKPSIFDEENEDYAYMRCKEIWVKRYPTQSFENEGSSSLRDEISVENHELFELVRSHKHLYSTFSEPFRSEIIYLIAAKQRYKGFLYMLQSSSDECSSFVPASDILLMWLTHQSYPTVYAEDVKEMQGDLSKVVRFGETVKAMELEKTKQLWHRTFRQPYEKAGGGIIMELGRAVTSNPLAYWEASDSDVNTKYKSMMSRFVLEVCVFMQLKAQKQPLQQDSSHEFLRLRTLRCHRELKLDQPISRLNDDSWHKAWHLYCEFGTKGVVLEVRRPNGHCFKGSIIKKATTFKWNDLIRAPSLTLERQLNQNLKVVVSITPPVQAPYLLKCVPDKVIDDSGAMVSDVVLKMNQYRPQEGRWLSRTVLDHGGRECFVICIRVGGGFWRRGGETPLPVKWEDRVIEIREGSWSYIAGSIGRTPEKVVGTATPKQPLEEFKAAWKFSTGDELMVQWDTSTPKPAFSFVLTNPTSESSVRLVKGQQKLYQEPRLDGEGQEEEEEDEDDDGFVTMIRYTNEDPTGRATALLNWKLLVIELLPEEDAVLALLLCVSILRSVSEMKKEDVGNLLIRRRMKEMKIGLRDWGSIMLHPSSKSSTTSSPYLQPWYWNVETVMASNSVDHPTRQPASSYLPVEGGDKLYKQGIIS
SIO_010081: LOC111780097
subclass of: SO_0000673
so part of: LOC111780097
location: join(778285..778481,778586..778703,779805..780188,781011..781283,781374..781894,782016..782140,783243..783400,783481..783993)
location: region:778285-783993:1
so has part: feature:778285-778481:1:exon
so has part: feature:778586-778703:1:exon
so has part: feature:779805-780188:1:exon
so has part: feature:781011-781283:1:exon
so has part: feature:781374-781894:1:exon
so has part: feature:782016-782140:1:exon
so has part: feature:783243-783400:1:exon
so has part: feature:783481-783993:1:exon

XP_023516145.1
type: Protein
SIO_000068: ncbiprotein

position:778285:1
position: 778285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:783993:1
position: 783993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:778285-778481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:778586-778703:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:779805-780188:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:781011-781283:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:781374-781894:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:782016-782140:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:783243-783400:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:783481-783993:1:exon

LOC111780097
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111780097
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycine-rich domain-containing protein 1 isoform X2
translation: MSSDRPISEFSASMSARSLGDMSELGSIQIGVDIISAVRRNLGFLRTVADSHWLHCESTLSEAIRRYEELWMPLISDLMVAGASPPMILPPLDVEWVWFCHTLNPVNYKHYCETRFLKLIGKPSIFDEENEDYAYMRCKEIWVKRSEIIYLIAAKQRYKGFLYMLQSSSDECSSFVPASDILLMWLTHQSYPTVYAEDVKEMQGDLSKVVRFGETVKAMELEKTKQLWHRTFRQPYEKAGGGIIMELGRAVTSNPLAYWEASDSDVNTKYKSMMSRFVLEVCVFMQLKAQKQPLQQDSSHEFLRLRTLRCHRELKLDQPISRLNDDSWHKAWHLYCEFGTKGVVLEVRRPNGHCFKGSIIKKATTFKWNDLIRAPSLTLERQLNQNLKVVVSITPPVQAPYLLKCVPDKVIDDSGAMVSDVVLKMNQYRPQEGRWLSRTVLDHGGRECFVICIRVGGGFWRRGGETPLPVKWEDRVIEIREGSWSYIAGSIGRTPEKVVGTATPKQPLEEFKAAWKFSTGDELMVQWDTSTPKPAFSFVLTNPTSESSVRLVKGQQKLYQEPRLDGEGQEEEEEDEDDDGFVTMIRYTNEDPTGRATALLNWKLLVIELLPEEDAVLALLLCVSILRSVSEMKKEDVGNLLIRRRMKEMKIGLRDWGSIMLHPSSKSSTTSSPYLQPWYWNVETVMASNSVDHPTRQPASSYLPVEGGDKLYKQGIIS
SIO_010081: LOC111780097
subclass of: SO_0000673
so part of: LOC111780097
location: join(778285..778481,778586..778703,779805..779923,780056..780188,781011..781283,781374..781894,782016..782140,783243..783400,783481..783993)
location: region:778285-783993:1
so has part: feature:778285-778481:1:exon
so has part: feature:778586-778703:1:exon
so has part: feature:779805-779923:1:exon
so has part: feature:780056-780188:1:exon
so has part: feature:781011-781283:1:exon
so has part: feature:781374-781894:1:exon
so has part: feature:782016-782140:1:exon
so has part: feature:783243-783400:1:exon
so has part: feature:783481-783993:1:exon

XP_023516146.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:778285-778481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:778586-778703:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:779805-779923:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:780056-780188:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:781011-781283:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:781374-781894:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:782016-782140:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:783243-783400:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:783481-783993:1:exon

LOC111780097
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111780097
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111780097 isoform X3
translation: MSSDRPISEFSASMSARSLGDMSELGSIQIGVDIISAVRRNLGFLRTVADSHWLHCESTLSEAIRRYEELWMPLISDLMVAGASPPMILPPLDVEWVWFCHTLNPSYPTVYAEDVKEMQGDLSKVVRFGETVKAMELEKTKQLWHRTFRQPYEKAGGGIIMELGRAVTSNPLAYWEASDSDVNTKYKSMMSRFVLEVCVFMQLKAQKQPLQQDSSHEFLRLRTLRCHRELKLDQPISRLNDDSWHKAWHLYCEFGTKGVVLEVRRPNGHCFKGSIIKKATTFKWNDLIRAPSLTLERQLNQNLKVVVSITPPVQAPYLLKCVPDKVIDDSGAMVSDVVLKMNQYRPQEGRWLSRTVLDHGGRECFVICIRVGGGFWRRGGETPLPVKWEDRVIEIREGSWSYIAGSIGRTPEKVVGTATPKQPLEEFKAAWKFSTGDELMVQWDTSTPKPAFSFVLTNPTSESSVRLVKGQQKLYQEPRLDGEGQEEEEEDEDDDGFVTMIRYTNEDPTGRATALLNWKLLVIELLPEEDAVLALLLCVSILRSVSEMKKEDVGNLLIRRRMKEMKIGLRDWGSIMLHPSSKSSTTSSPYLQPWYWNVETVMASNSVDHPTRQPASSYLPVEGGDKLYKQGIIS
SIO_010081: LOC111780097
subclass of: SO_0000673
so part of: LOC111780097
location: join(778285..778481,778586..778703,781011..781283,781374..781894,782016..782140,783243..783400,783481..783993)
location: region:778285-783993:1
so has part: feature:778285-778481:1:exon
so has part: feature:778586-778703:1:exon
so has part: feature:781011-781283:1:exon
so has part: feature:781374-781894:1:exon
so has part: feature:782016-782140:1:exon
so has part: feature:783243-783400:1:exon
so has part: feature:783481-783993:1:exon

XP_023516148.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:778285-778481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:778586-778703:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:781011-781283:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:781374-781894:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:782016-782140:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:783243-783400:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:783481-783993:1:exon

LOC111780097
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111780097
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycine-rich domain-containing protein 1 isoform X4
translation: MSSDRPISEFSASMSARSLGDMSELGSIQIGVDIISAVRRNLGFLRTVADSHWLHCESTLSEAIRRYEELWMPLISDLMVAGASPPMILPPLDVEWVWFCHTLNPVNYKHYCETRFLKLIGKPSIFDEENEDYAYMRCKEIWVKRYPTQSFENEGSSSLRDEISVENHELFELVRSHKHLYSTFSEPFRSEIIYLIAAKQRYKGFLYMLQSSSDECSSFVPASDILLMWLTHQSYPTVYAEDVKEMQGDLSKVVRFGETVKAMELEKTKQLWHRTFRQPYEKAGGGIIMELGRAVTSNPLAYWEASDSDVNTKYKSMMSRFVLEVCVFMQLKAQKQPLQQDSSHEFLRLRTLRCHRELKLDQPISRLNDDSWHKAWHLYCEFGTKGVVLEVRRPNGHCFKGSIIKKATTFKWNDLIRAPSLTLERQLNQNLKVVVSITPPVQAPYLLKCVPDKVIDDSGAMVSDVVLKMNQYRPQEGRWLSRTVLDHGGRECFVICIRVGGGFWRRGGETPLPVKWEDRVIEIREGSWSYIAGSIGRTPGKARKRSAKAISRATTRW
SIO_010081: LOC111780097
subclass of: SO_0000673
so part of: LOC111780097
location: join(778285..778481,778586..778703,779805..780188,781011..781283,781374..781894,782016..782140,783481..783536)
location: region:778285-783536:1
so has part: feature:778285-778481:1:exon
so has part: feature:778586-778703:1:exon
so has part: feature:779805-780188:1:exon
so has part: feature:781011-781283:1:exon
so has part: feature:781374-781894:1:exon
so has part: feature:782016-782140:1:exon
so has part: feature:783481-783536:1:exon

XP_023516149.1
type: Protein
SIO_000068: ncbiprotein

position:783536:1
position: 783536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:778285-778481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:778586-778703:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:779805-780188:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:781011-781283:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:781374-781894:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:782016-782140:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:783481-783536:1:exon

LOC111780097
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111780097
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycine-rich domain-containing protein 1 isoform X5
translation: MSSDRPISEFSASMSARSLGDMSELGSIQIGVDIISAVRRNLGFLRTVADSHWLHCESTLSEAIRRYEELWMPLISDLMVAGASPPMILPPLDVEWVWFCHTLNPVNYKHYCETRFLKLIGKPSIFDEENEDYAYMRCKEIWVKRYPTQSFENEGSSSLRDEISVENHELFELVRSHKHLYSTFSEPFRSEIIYLIAAKQRYKGFLYMLQSSSDECSSFVPASDILLMWLTHQSYPTVYAEDVKEMQGDLSKVVRFGETVKAMELEKTKQLWHRTFRQPYEKAGGGIIMELGRAVTSNPLAYWEASDSDVNTKYKSMMSRFVLEVCVFMQLKAQKQPLQQDSSHEFLRLRTLRCHRELKLDQPISRLNDDSWHKAWHLYCEFGTKGVVLEVRRPNGHCFKGSIIKKATTFKWNDLIRAPSLTLERQLNQNLKVVVSITPPVQAPYLLKCVPDKVIDDSGAMVSDVVLKMNQYRPQEGRWLSRTVLDHGGRECFVICIRVGGGFWRRGGETPLPVKWEDRVIEIREGSWSYIAGSIGRTPEQRKW
SIO_010081: LOC111780097
subclass of: SO_0000673
so part of: LOC111780097
location: join(778285..778481,778586..778703,779805..780188,781011..781283,781374..781894,782016..782140,783238..783254)
location: region:778285-783254:1
so has part: feature:778285-778481:1:exon
so has part: feature:778586-778703:1:exon
so has part: feature:779805-780188:1:exon
so has part: feature:781011-781283:1:exon
so has part: feature:781374-781894:1:exon
so has part: feature:782016-782140:1:exon
so has part: feature:783238-783254:1:exon

XP_023516150.1
type: Protein
SIO_000068: ncbiprotein

position:783254:1
position: 783254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:778285-778481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:778586-778703:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:779805-780188:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:781011-781283:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:781374-781894:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:782016-782140:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:783238-783254:1:exon

LOC111779973
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111779973
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 804104..806321
location: region:804104-806321:1
so has part: feature:804104-806321:1:exon
subclass of: SO_0000011

111779973
type: Gene
SIO_000068: ncbigene

position:804104:1
position: 804104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:806321:1
position: 806321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:804104-806321:1:exon

LOC111779973
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3664
nc RNA class: lncRNA
gene: LOC111779973
product: uncharacterized LOC111779973, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_002812772.1
SIO_010081: LOC111779973
subclass of: SO_0000673
so part of: LOC111779973
location: join(804104..804352,804432..804513,805037..805116,806146..806321)
location: region:804104-806321:1
so has part: feature:804104-804352:1:exon
so has part: feature:804432-804513:1:exon
so has part: feature:805037-805116:1:exon
so has part: feature:806146-806321:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:804104-804352:1:exon

position:804352:1
position: 804352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:804432-804513:1:exon

position:804432:1
position: 804432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:804513:1
position: 804513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:805037-805116:1:exon

position:805037:1
position: 805037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:805116:1
position: 805116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:806146-806321:1:exon

position:806146:1
position: 806146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111779973
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3664
nc RNA class: lncRNA
gene: LOC111779973
product: uncharacterized LOC111779973, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_002812771.1
SIO_010081: LOC111779973
subclass of: SO_0000673
so part of: LOC111779973
location: join(804104..804352,804432..804499,805465..805467,806146..806321)
location: region:804104-806321:1
so has part: feature:804104-804352:1:exon
so has part: feature:804432-804499:1:exon
so has part: feature:805465-805467:1:exon
so has part: feature:806146-806321:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:804104-804352:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:804432-804499:1:exon

position:804499:1
position: 804499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:805465-805467:1:exon

position:805465:1
position: 805465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:805467:1
position: 805467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:806146-806321:1:exon

LOC111780470
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780470
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 856976..857533
location: region:856976-857533:1
so has part: feature:856976-857533:1:exon
subclass of: SO_0000010

111780470
type: Gene
SIO_000068: ncbigene

position:856976:1
position: 856976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:857533:1
position: 857533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:856976-857533:1:exon

LOC111780470
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111780470
product: uncharacterized LOC111780470
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_023660890.1
SIO_010081: LOC111780470
subclass of: SO_0000673
so part of: LOC111780470
location: 856976..857533
location: region:856976-857533:1
so has part: feature:856976-857533:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:856976-857533:1:exon

LOC111780470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111780470
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111780470
translation: MANQSTGQGGKDLGIMTMESRYLRDLQRHKPPSFDGGKVNSIAAENWLEAIETAFHFMNCPLKYVVHCGTYMLKGEAHFWWKGAQKTIIPQREFITWCQFKDAYIDKYYPITTRVKMQTTFLALKQRDRSVEEYDLEFNRLARFSQAYVSSEKLKGERFIAGLREELRGNVAXSHRVQSRMQQSR
SIO_010081: LOC111780470
subclass of: SO_0000673
so part of: LOC111780470
location: 856976..857533
location: region:856976-857533:1
so has part: feature:856976-857533:1:exon

XP_023516658.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:856976-857533:1:exon

LOC111779975
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111779975
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 867952..868960
location: region:867952-868960:1
so has part: feature:867952-868960:1:exon
subclass of: SO_0000011

111779975
type: Gene
SIO_000068: ncbigene

position:867952:1
position: 867952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:868960:1
position: 868960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:867952-868960:1:exon

LOC111779975
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3664
nc RNA class: lncRNA
gene: LOC111779975
product: uncharacterized LOC111779975
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_002812774.1
SIO_010081: LOC111779975
subclass of: SO_0000673
so part of: LOC111779975
location: join(867952..868031,868124..868202,868422..868960)
location: region:867952-868960:1
so has part: feature:867952-868031:1:exon
so has part: feature:868124-868202:1:exon
so has part: feature:868422-868960:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:867952-868031:1:exon

position:868031:1
position: 868031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:868124-868202:1:exon

position:868124:1
position: 868124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:868202:1
position: 868202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:868422-868960:1:exon

position:868422:1
position: 868422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111779964
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111779964
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(891948..898587)
location: region:891948-898587:-1
so has part: feature:891948-898587:-1:exon
subclass of: SO_0000010

111779964
type: Gene
SIO_000068: ncbigene

position:891948:-1
position: 891948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:898587:-1
position: 898587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:891948-898587:-1:exon

LOC111779964
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 3664
gene: LOC111779964
product: uncharacterized LOC111779964, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XR_002812767.1
SIO_010081: LOC111779964
so part of: LOC111779964
location: complement(join(891948..892807,892952..893008,893097..896519,898199..898587))
location: region:891948-898587:-1
so has part: feature:898199-898587:-1:exon
so has part: feature:893097-896519:-1:exon
so has part: feature:892952-893008:-1:exon
so has part: feature:891948-892807:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:898199-898587:-1:exon

position:898199:-1
position: 898199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:893097-896519:-1:exon

position:893097:-1
position: 893097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:896519:-1
position: 896519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:892952-893008:-1:exon

position:892952:-1
position: 892952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:893008:-1
position: 893008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:891948-892807:-1:exon

position:892807:-1
position: 892807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111779964
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111779964
product: uncharacterized LOC111779964, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_023660186.1
SIO_010081: LOC111779964
subclass of: SO_0000673
so part of: LOC111779964
location: complement(join(891948..892807,892952..893008,893097..893189,896288..896344,896441..896519,898212..898584))
location: region:891948-898584:-1
so has part: feature:898212-898584:-1:exon
so has part: feature:896441-896519:-1:exon
so has part: feature:896288-896344:-1:exon
so has part: feature:893097-893189:-1:exon
so has part: feature:892952-893008:-1:exon
so has part: feature:891948-892807:-1:exon

position:898584:-1
position: 898584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:898212-898584:-1:exon

position:898212:-1
position: 898212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:896441-896519:-1:exon

position:896441:-1
position: 896441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:896288-896344:-1:exon

position:896288:-1
position: 896288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:896344:-1
position: 896344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:893097-893189:-1:exon

position:893189:-1
position: 893189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:892952-893008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:891948-892807:-1:exon

LOC111779964
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 3664
gene: LOC111779964
product: uncharacterized LOC111779964, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_002812769.1
SIO_010081: LOC111779964
so part of: LOC111779964
location: complement(join(891948..892807,892952..893008,893097..896344,896441..896519,896615..897394))
location: region:891948-897394:-1
so has part: feature:896615-897394:-1:exon
so has part: feature:896441-896519:-1:exon
so has part: feature:893097-896344:-1:exon
so has part: feature:892952-893008:-1:exon
so has part: feature:891948-892807:-1:exon

position:897394:-1
position: 897394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:896615-897394:-1:exon

position:896615:-1
position: 896615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:896441-896519:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:893097-896344:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:892952-893008:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:891948-892807:-1:exon

LOC111779964
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 3664
gene: LOC111779964
product: uncharacterized LOC111779964, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_002812768.1
SIO_010081: LOC111779964
so part of: LOC111779964
location: complement(join(891948..892807,892952..893008,893097..893189,896288..896519,896615..897394))
location: region:891948-897394:-1
so has part: feature:896615-897394:-1:exon
so has part: feature:896288-896519:-1:exon
so has part: feature:893097-893189:-1:exon
so has part: feature:892952-893008:-1:exon
so has part: feature:891948-892807:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:896615-897394:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:896288-896519:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:893097-893189:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:892952-893008:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:891948-892807:-1:exon

LOC111779964
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 3664
gene: LOC111779964
product: uncharacterized LOC111779964, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XR_002812766.1
SIO_010081: LOC111779964
so part of: LOC111779964
location: complement(join(891948..892807,892952..893008,893097..896519,896615..897394))
location: region:891948-897394:-1
so has part: feature:896615-897394:-1:exon
so has part: feature:893097-896519:-1:exon
so has part: feature:892952-893008:-1:exon
so has part: feature:891948-892807:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:896615-897394:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:893097-896519:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:892952-893008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:891948-892807:-1:exon

LOC111779964
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111779964
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111779964
translation: MPKLKVGYEPHDAIPSLSLAASPLVLFETIISHSLQWRPRLRWQHPTLPTHRLLLSRVRHRRGIRRQKDRATLRIRKKSRSHSKRRRRHRRSSSDSLSSSDSDSITPEAIALLKVSLKSLAVQSGIRRMVERKRRGSEVRNITMKGVSIRLKSWGPCHDDRAVDWELMYRNSQKRVVALCRFPSFYCGRRMMVLGGVLSLAKRFC
SIO_010081: LOC111779964
subclass of: SO_0000673
so part of: LOC111779964
location: complement(join(892798..892807,892952..893008,893097..893189,896288..896344,896441..896519,898212..898533))
location: region:892798-898533:-1
so has part: feature:898212-898533:-1:exon
so has part: feature:896441-896519:-1:exon
so has part: feature:896288-896344:-1:exon
so has part: feature:893097-893189:-1:exon
so has part: feature:892952-893008:-1:exon
so has part: feature:892798-892807:-1:exon

XP_023515954.1
type: Protein
SIO_000068: ncbiprotein

position:892798:-1
position: 892798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:898533:-1
position: 898533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:898212-898533:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:896441-896519:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:896288-896344:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:893097-893189:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:892952-893008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:892798-892807:-1:exon

LOC111780471
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780471
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 898944..899912
location: region:898944-899912:1
so has part: feature:898944-899912:1:exon
subclass of: SO_0000010

111780471
type: Gene
SIO_000068: ncbigene

position:898944:1
position: 898944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:899912:1
position: 899912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:898944-899912:1:exon

LOC111780471
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111780471
product: keratin-associated protein 4-12-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
transcript id: XM_023660891.1
SIO_010081: LOC111780471
subclass of: SO_0000673
so part of: LOC111780471
location: 898944..899912
location: region:898944-899912:1
so has part: feature:898944-899912:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:898944-899912:1:exon

LOC111780471
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111780471
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: keratin-associated protein 4-12-like
translation: MTGLARPCVVMIQVGSALCCDDWVGSALCRDDRDGSALCRDDRVGSALCRDDRVGSTLCRSTPCRDDQAGSALCRSTPCRDDQAGFALCRSTLCRDDQAGSALCRSTLCRDDQAGSALCRSASCRDDRADFAPCRDDRVGSTLCRSTPCRDDRAGSTLCCSTLCRDDWAGSALCCSTPCRDDRAGSALCRSTPCRDDRAGSALCRSTPCRDDRAGSTLCCSTLCRDDWAGSALCCSTPCRDDRAGSALCRSTPCRDDRAGSALCRSTPCRDDRAGSAPCRDDWAGFALCRSAPCRDDQAGSALCRSAPREVTDGRPNHKRSK
SIO_010081: LOC111780471
subclass of: SO_0000673
so part of: LOC111780471
location: 898944..899912
location: region:898944-899912:1
so has part: feature:898944-899912:1:exon

XP_023516659.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:898944-899912:1:exon

LOC111779953
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111779953
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(900100..903917)
location: region:900100-903917:-1
so has part: feature:900100-903917:-1:exon
subclass of: SO_0000010

111779953
type: Gene
SIO_000068: ncbigene

position:900100:-1
position: 900100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:903917:-1
position: 903917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:900100-903917:-1:exon

LOC111779953
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111779953
product: putative pectinesterase/pectinesterase inhibitor 28
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_023660173.1
SIO_010081: LOC111779953
subclass of: SO_0000673
so part of: LOC111779953
location: complement(join(900100..900900,901464..901977,903399..903917))
location: region:900100-903917:-1
so has part: feature:903399-903917:-1:exon
so has part: feature:901464-901977:-1:exon
so has part: feature:900100-900900:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:903399-903917:-1:exon

position:903399:-1
position: 903399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:901464-901977:-1:exon

position:901464:-1
position: 901464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:901977:-1
position: 901977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:900100-900900:-1:exon

position:900900:-1
position: 900900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111779953
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111779953
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative pectinesterase/pectinesterase inhibitor 28
translation: MAYDEDDSGNNKRYAIIGVSSMLLVAMVVAVTVGVNLNSEEAGGPTTGTKSNEISASVKAIKSICQTTDYKKDCVDSLKSNANNSADPHELVKAGFKAAMKLLQAAAKQSVTLQQLEQDPRASQALAGCKELMDFAIDELKFSMSRFGDFDTTHLDEVLIDLKIWLSATITYQETCLDSFENTTGDASKKMKKALKTSMRLSSNGLAMVTEISSMLTDLKVPGIGRRRLLDAPVFVGHDDYPEWADPGIRRLLAAKGKVKANFVVAVDGSGDFNSIQSAIDKVPKRKNNETFVIHIKEGVYKEYVNIKKSITHLMLVGDGPKKTIISGQKNFVDGITTFKTATFAATAEHFLARDIGFVNTAGPHKHQAVALRVQADKAIFFNCEMHGYQDTLYVHTLRQFYRDCIVSGTIDFIFGDAAVVFQNCIFLIRKPLSNQQNIVTAHGRKERRQPSALIIQNCTFKADTDLAPVKNEFRSFLGRPWKEYSRTIIMESYIDDVIHPDGWLPWSGDWGLKTCFYTEFRNYGPGSDKSKRVKWRGVKVLTPAHAVDFTASRFLLGDRWIKATGTPYAPGLTMKGHSEV
SIO_010081: LOC111779953
subclass of: SO_0000673
so part of: LOC111779953
location: complement(join(900188..900900,901464..901977,903399..903917))
location: region:900188-903917:-1
so has part: feature:903399-903917:-1:exon
so has part: feature:901464-901977:-1:exon
so has part: feature:900188-900900:-1:exon

XP_023515941.1
type: Protein
SIO_000068: ncbiprotein

position:900188:-1
position: 900188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:903399-903917:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:901464-901977:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:900188-900900:-1:exon

LOC111779955
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111779955
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(905953..910063)
location: region:905953-910063:-1
so has part: feature:905953-910063:-1:exon
subclass of: SO_0000010

111779955
type: Gene
SIO_000068: ncbigene

position:905953:-1
position: 905953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:910063:-1
position: 910063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:905953-910063:-1:exon

LOC111779955
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111779955
product: putative pectinesterase/pectinesterase inhibitor 22, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_023660177.1
SIO_010081: LOC111779955
subclass of: SO_0000673
so part of: LOC111779955
location: complement(join(905953..906753,906991..907819,908045..908129,909907..910063))
location: region:905953-910063:-1
so has part: feature:909907-910063:-1:exon
so has part: feature:908045-908129:-1:exon
so has part: feature:906991-907819:-1:exon
so has part: feature:905953-906753:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:909907-910063:-1:exon

position:909907:-1
position: 909907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:908045-908129:-1:exon

position:908045:-1
position: 908045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:908129:-1
position: 908129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:906991-907819:-1:exon

position:906991:-1
position: 906991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:907819:-1
position: 907819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:905953-906753:-1:exon

position:906753:-1
position: 906753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111779955
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111779955
product: putative pectinesterase/pectinesterase inhibitor 22, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_023660175.1
SIO_010081: LOC111779955
subclass of: SO_0000673
so part of: LOC111779955
location: complement(join(905953..906753,906991..907962))
location: region:905953-907962:-1
so has part: feature:906991-907962:-1:exon
so has part: feature:905953-906753:-1:exon

position:907962:-1
position: 907962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:906991-907962:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:905953-906753:-1:exon

LOC111779955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111779955
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative pectinesterase/pectinesterase inhibitor 22 isoform X2
translation: MSREKICSDMEDRNSCISNIQHELGRSVNSNPSSVLSAAIRATLNEARRAIESITKFSTFSFSYREEMAIEDCKELLDFSVSELAWSLAEMKRIRTGKNEASDEGNLKAWLSAALSNQDTCLEGFEGTDRHLVGFIRGSLKQVTLLISNVLALYTQLHSSPFQPPRNETIEITKSSEFPDWMTDNEHELVKSHPRSARVDANVALDGSGDFRSITEAVNEAPNYSNRRYIIYIKKGVYKENIDMKRKKTNIMFIGDGVGETVVTGSRNFLQGWTTFRTATVAVSGKGFIARDMTFRNTAGPQNHQAVALRVDSDQSAFYRCSFEGYQDTLYVHSLRQFYRECNIYGTIDYIFGNGAAVFQKCNIYTRVPLPLQKVTITAQGRKSPHQSTGFSIQDSFIYATQPTYLGRPWKLYSRTVFLNTYMSGLVQPRGWLEWYGNFALGTLWYGEFKNYGPGASLSGRVKWPGYHNIRDTAVARFFTPMRFINGRTWLPKTGVKFTLGLSN
SIO_010081: LOC111779955
subclass of: SO_0000673
so part of: LOC111779955
location: complement(join(906083..906753,906991..907819,908045..908059))
location: region:906083-908059:-1
so has part: feature:908045-908059:-1:exon
so has part: feature:906991-907819:-1:exon
so has part: feature:906083-906753:-1:exon

XP_023515945.1
type: Protein
SIO_000068: ncbiprotein

position:906083:-1
position: 906083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:908059:-1
position: 908059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:908045-908059:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:906991-907819:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:906083-906753:-1:exon

LOC111779955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111779955
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative pectinesterase/pectinesterase inhibitor 22 isoform X1
translation: MLRVSLAIHLFICILLPTLRVSCIDVIYPNEQNNVTQSMISQICSDMEDRNSCISNIQHELGRSVNSNPSSVLSAAIRATLNEARRAIESITKFSTFSFSYREEMAIEDCKELLDFSVSELAWSLAEMKRIRTGKNEASDEGNLKAWLSAALSNQDTCLEGFEGTDRHLVGFIRGSLKQVTLLISNVLALYTQLHSSPFQPPRNETIEITKSSEFPDWMTDNEHELVKSHPRSARVDANVALDGSGDFRSITEAVNEAPNYSNRRYIIYIKKGVYKENIDMKRKKTNIMFIGDGVGETVVTGSRNFLQGWTTFRTATVAVSGKGFIARDMTFRNTAGPQNHQAVALRVDSDQSAFYRCSFEGYQDTLYVHSLRQFYRECNIYGTIDYIFGNGAAVFQKCNIYTRVPLPLQKVTITAQGRKSPHQSTGFSIQDSFIYATQPTYLGRPWKLYSRTVFLNTYMSGLVQPRGWLEWYGNFALGTLWYGEFKNYGPGASLSGRVKWPGYHNIRDTAVARFFTPMRFINGRTWLPKTGVKFTLGLSN
SIO_010081: LOC111779955
subclass of: SO_0000673
so part of: LOC111779955
location: complement(join(906083..906753,906991..907945))
location: region:906083-907945:-1
so has part: feature:906991-907945:-1:exon
so has part: feature:906083-906753:-1:exon

XP_023515943.1
type: Protein
SIO_000068: ncbiprotein

position:907945:-1
position: 907945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:906991-907945:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:906083-906753:-1:exon

LOC111779966
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111779966
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(920943..923278)
location: region:920943-923278:-1
so has part: feature:920943-923278:-1:exon
subclass of: SO_0000010

111779966
type: Gene
SIO_000068: ncbigene

position:920943:-1
position: 920943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:923278:-1
position: 923278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:920943-923278:-1:exon

LOC111779966
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111779966
product: 60S ribosomal protein L18-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_023660189.1
SIO_010081: LOC111779966
subclass of: SO_0000673
so part of: LOC111779966
location: complement(join(920943..921312,921578..921760,921863..921991,923010..923099,923207..923278))
location: region:920943-923278:-1
so has part: feature:923207-923278:-1:exon
so has part: feature:923010-923099:-1:exon
so has part: feature:921863-921991:-1:exon
so has part: feature:921578-921760:-1:exon
so has part: feature:920943-921312:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:923207-923278:-1:exon

position:923207:-1
position: 923207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:923010-923099:-1:exon

position:923010:-1
position: 923010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:923099:-1
position: 923099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:921863-921991:-1:exon

position:921863:-1
position: 921863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:921991:-1
position: 921991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:921578-921760:-1:exon

position:921578:-1
position: 921578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:921760:-1
position: 921760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:920943-921312:-1:exon

position:921312:-1
position: 921312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111779966
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111779966
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L18-2-like
translation: MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV
SIO_010081: LOC111779966
subclass of: SO_0000673
so part of: LOC111779966
location: complement(join(921154..921312,921578..921760,921863..921991,923010..923099,923207..923209))
location: region:921154-923209:-1
so has part: feature:923207-923209:-1:exon
so has part: feature:923010-923099:-1:exon
so has part: feature:921863-921991:-1:exon
so has part: feature:921578-921760:-1:exon
so has part: feature:921154-921312:-1:exon

XP_023515957.1
type: Protein
SIO_000068: ncbiprotein

position:921154:-1
position: 921154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:923209:-1
position: 923209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:923207-923209:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:923010-923099:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:921863-921991:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:921578-921760:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:921154-921312:-1:exon

LOC111780764
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780764
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(922269..922349)
location: region:922269-922349:-1
so has part: feature:922269-922349:-1:exon
subclass of: SO_0000578

111780764
type: Gene
SIO_000068: ncbigene

position:922269:-1
position: 922269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:922349:-1
position: 922349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:922269-922349:-1:exon

LOC111780764
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3664
nc RNA class: snoRNA
gene: LOC111780764
product: small nucleolar RNA snoR53Y
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01279
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_002812909.1
SIO_010081: LOC111780764
subclass of: SO_0000673
so part of: LOC111780764
location: complement(922269..922349)
location: region:922269-922349:-1
so has part: feature:922269-922349:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:922269-922349:-1:exon

LOC111780762
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780762
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(922591..922686)
location: region:922591-922686:-1
so has part: feature:922591-922686:-1:exon
subclass of: SO_0000578

111780762
type: Gene
SIO_000068: ncbigene

position:922591:-1
position: 922591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:922686:-1
position: 922686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:922591-922686:-1:exon

LOC111780762
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3664
nc RNA class: snoRNA
gene: LOC111780762
product: small nucleolar RNA snoR69Y
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01198
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_002812907.1
SIO_010081: LOC111780762
subclass of: SO_0000673
so part of: LOC111780762
location: complement(922591..922686)
location: region:922591-922686:-1
so has part: feature:922591-922686:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:922591-922686:-1:exon

LOC111779967
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111779967
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(925228..932438)
location: region:925228-932438:-1
so has part: feature:925228-932438:-1:exon
subclass of: SO_0000010

111779967
type: Gene
SIO_000068: ncbigene

position:925228:-1
position: 925228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:932438:-1
position: 932438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:925228-932438:-1:exon

LOC111779967
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111779967
product: malignant T-cell-amplified sequence 1 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_023660190.1
SIO_010081: LOC111779967
subclass of: SO_0000673
so part of: LOC111779967
location: complement(join(925228..925470,925560..925623,925901..925968,926070..926206,930920..931017,931129..931196,931405..931486,932254..932438))
location: region:925228-932438:-1
so has part: feature:932254-932438:-1:exon
so has part: feature:931405-931486:-1:exon
so has part: feature:931129-931196:-1:exon
so has part: feature:930920-931017:-1:exon
so has part: feature:926070-926206:-1:exon
so has part: feature:925901-925968:-1:exon
so has part: feature:925560-925623:-1:exon
so has part: feature:925228-925470:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:932254-932438:-1:exon

position:932254:-1
position: 932254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:931405-931486:-1:exon

position:931405:-1
position: 931405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:931486:-1
position: 931486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:931129-931196:-1:exon

position:931129:-1
position: 931129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:931196:-1
position: 931196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:930920-931017:-1:exon

position:930920:-1
position: 930920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:931017:-1
position: 931017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:926070-926206:-1:exon

position:926070:-1
position: 926070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:926206:-1
position: 926206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:925901-925968:-1:exon

position:925901:-1
position: 925901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:925968:-1
position: 925968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:925560-925623:-1:exon

position:925560:-1
position: 925560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:925623:-1
position: 925623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:925228-925470:-1:exon

position:925470:-1
position: 925470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111779967
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111779967
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: malignant T-cell-amplified sequence 1 homolog
translation: MFKKFSTEDVSAQNQVKASVQRRIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGALDDEVEADTPVAIMAEGKQHALAIGFTKMSAKQIRATNKGIGVDNMHYLNDGLWKMERLD
SIO_010081: LOC111779967
subclass of: SO_0000673
so part of: LOC111779967
location: complement(join(925453..925470,925560..925623,925901..925968,926070..926206,930920..931017,931129..931196,931405..931486,932254..932264))
location: region:925453-932264:-1
so has part: feature:932254-932264:-1:exon
so has part: feature:931405-931486:-1:exon
so has part: feature:931129-931196:-1:exon
so has part: feature:930920-931017:-1:exon
so has part: feature:926070-926206:-1:exon
so has part: feature:925901-925968:-1:exon
so has part: feature:925560-925623:-1:exon
so has part: feature:925453-925470:-1:exon

XP_023515958.1
type: Protein
SIO_000068: ncbiprotein

position:925453:-1
position: 925453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:932264:-1
position: 932264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:932254-932264:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:931405-931486:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:931129-931196:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:930920-931017:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:926070-926206:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:925901-925968:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:925560-925623:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:925453-925470:-1:exon

LOC111779962
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111779962
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 939825..948303
location: region:939825-948303:1
so has part: feature:939825-948303:1:exon
subclass of: SO_0000010

111779962
type: Gene
SIO_000068: ncbigene

position:939825:1
position: 939825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:948303:1
position: 948303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:939825-948303:1:exon

LOC111779962
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111779962
product: bidirectional sugar transporter SWEET16-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_023660184.1
SIO_010081: LOC111779962
subclass of: SO_0000673
so part of: LOC111779962
location: join(939825..939999,940088..940124,943301..943514,947123..947284,947371..947490,947773..948303)
location: region:939825-948303:1
so has part: feature:939825-939999:1:exon
so has part: feature:940088-940124:1:exon
so has part: feature:943301-943514:1:exon
so has part: feature:947123-947284:1:exon
so has part: feature:947371-947490:1:exon
so has part: feature:947773-948303:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:939825-939999:1:exon

position:939999:1
position: 939999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:940088-940124:1:exon

position:940088:1
position: 940088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:940124:1
position: 940124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:943301-943514:1:exon

position:943301:1
position: 943301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:943514:1
position: 943514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:947123-947284:1:exon

position:947123:1
position: 947123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:947284:1
position: 947284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:947371-947490:1:exon

position:947371:1
position: 947371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:947490:1
position: 947490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:947773-948303:1:exon

position:947773:1
position: 947773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111779962
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111779962
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bidirectional sugar transporter SWEET16-like
translation: MATDLSTVLGIIGNVISILVFASPIKTFIGIVKKKSTENYKAIPYVTTLLSTSLWTFYGALKGADGLLVTTVNAAGVAFQLTYVTLFIIFAPKRKKVTTMKLVGLFNVVFYGSVIGATLLAMHGSLRLTFVGILCVALTIAMYASPLAAMRNVIKTKSVEYMPFLLSFFLFLNAGVWSAYAILVKDIYILVPNGIGFALGTVQLILYGMYKDKSKSTKSTEMMEEEGSAHLVEMRMNGDDEHPKNRGIIKGLSLPKPSLDRQYSVQNILRSLSYGPYDFYPPGALDEDDEVENGKM
SIO_010081: LOC111779962
subclass of: SO_0000673
so part of: LOC111779962
location: join(939963..939999,940088..940124,943301..943514,947123..947284,947371..947490,947773..948093)
location: region:939963-948093:1
so has part: feature:939963-939999:1:exon
so has part: feature:940088-940124:1:exon
so has part: feature:943301-943514:1:exon
so has part: feature:947123-947284:1:exon
so has part: feature:947371-947490:1:exon
so has part: feature:947773-948093:1:exon

XP_023515952.1
type: Protein
SIO_000068: ncbiprotein

position:939963:1
position: 939963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:948093:1
position: 948093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:939963-939999:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:940088-940124:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:943301-943514:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:947123-947284:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:947371-947490:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:947773-948093:1:exon

LOC111779965
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111779965
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(949400..950360)
location: region:949400-950360:-1
so has part: feature:949400-950360:-1:exon
subclass of: SO_0000010

111779965
type: Gene
SIO_000068: ncbigene

position:949400:-1
position: 949400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:950360:-1
position: 950360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:949400-950360:-1:exon

LOC111779965
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111779965
product: pectinesterase inhibitor-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023660188.1
SIO_010081: LOC111779965
subclass of: SO_0000673
so part of: LOC111779965
location: complement(949400..950360)
location: region:949400-950360:-1
so has part: feature:949400-950360:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:949400-950360:-1:exon

LOC111779965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111779965
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pectinesterase inhibitor-like
translation: MKLISIAAMAITILSITHFQILADDPQKPFLTNADLITKTCSSTPYNDLCLSILESSPNSNGTDLYGLTEIMLYIAAENVSLIHEHLMELQNKTEMDTFMDECLTDCLESYQDATDQIEDSITALEFKAYHDIKTWVAAAMNDGAVCENGFKEKPDHKSPIVEMSKVFDQICSIILAMANILSQGNRNMNSEDIFNF
SIO_010081: LOC111779965
subclass of: SO_0000673
so part of: LOC111779965
location: complement(949574..950167)
location: region:949574-950167:-1
so has part: feature:949574-950167:-1:exon

XP_023515956.1
type: Protein
SIO_000068: ncbiprotein

position:949574:-1
position: 949574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:950167:-1
position: 950167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:949574-950167:-1:exon

LOC111779960
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111779960
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 960665..965068
location: region:960665-965068:1
so has part: feature:960665-965068:1:exon
subclass of: SO_0000010

111779960
type: Gene
SIO_000068: ncbigene

position:960665:1
position: 960665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:965068:1
position: 965068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:960665-965068:1:exon

LOC111779960
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111779960
product: epoxide hydrolase A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_023660183.1
SIO_010081: LOC111779960
subclass of: SO_0000673
so part of: LOC111779960
location: join(960665..961244,963057..963307,964720..965068)
location: region:960665-965068:1
so has part: feature:960665-961244:1:exon
so has part: feature:963057-963307:1:exon
so has part: feature:964720-965068:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:960665-961244:1:exon

position:961244:1
position: 961244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:963057-963307:1:exon

position:963057:1
position: 963057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:963307:1
position: 963307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:964720-965068:1:exon

position:964720:1
position: 964720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111779960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111779960
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111779960
translation: MDTIQHRTVSVNGINMHVAEKGEGPIVLFIHGFPELWYTWRHQILALSSLGYRAVAPDLRGYGDSDSPDSISSYSIMHIIGDLVALVESLGVKQVFVVAHDWGAIIAWSLCSFRADIVKAFVCLSVPFRPRNPMMKPVETFRKVFGDDYYICRFQNPGGIEEEMAEVGAKAKAVLQSILTTRSPGPLILPPKGEAFKPRPGSPPPLPSWLSEQDLSYVASKYEQKGFTGPLNYYRSMDLNWELTAPWTGMEVKVPVKYIVGDADIVYTTPGVKEYVNGGGFKKNVPFLQEVVIMEGVAHFLNQEKPEEINTHILNFIKKF
SIO_010081: LOC111779960
subclass of: SO_0000673
so part of: LOC111779960
location: join(960780..961244,963057..963307,964720..964966)
location: region:960780-964966:1
so has part: feature:960780-961244:1:exon
so has part: feature:963057-963307:1:exon
so has part: feature:964720-964966:1:exon

XP_023515951.1
type: Protein
SIO_000068: ncbiprotein

position:960780:1
position: 960780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:964966:1
position: 964966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:960780-961244:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:963057-963307:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:964720-964966:1:exon

LOC111779956
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111779956
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(971275..977467)
location: region:971275-977467:-1
so has part: feature:971275-977467:-1:exon
subclass of: SO_0000010

111779956
type: Gene
SIO_000068: ncbigene

position:971275:-1
position: 971275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:977467:-1
position: 977467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:971275-977467:-1:exon

LOC111779956
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111779956
product: E3 ubiquitin-protein ligase RFI2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_023660178.1
SIO_010081: LOC111779956
subclass of: SO_0000673
so part of: LOC111779956
location: complement(join(971275..972222,972508..972889,972985..973010,975386..975444,976660..976829,977049..977467))
location: region:971275-977467:-1
so has part: feature:977049-977467:-1:exon
so has part: feature:976660-976829:-1:exon
so has part: feature:975386-975444:-1:exon
so has part: feature:972985-973010:-1:exon
so has part: feature:972508-972889:-1:exon
so has part: feature:971275-972222:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:977049-977467:-1:exon

position:977049:-1
position: 977049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:976660-976829:-1:exon

position:976660:-1
position: 976660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:976829:-1
position: 976829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:975386-975444:-1:exon

position:975386:-1
position: 975386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:975444:-1
position: 975444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:972985-973010:-1:exon

position:972985:-1
position: 972985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:973010:-1
position: 973010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:972508-972889:-1:exon

position:972508:-1
position: 972508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:972889:-1
position: 972889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:971275-972222:-1:exon

position:972222:-1
position: 972222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111779956
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111779956
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RFI2-like
translation: MGLGNDDDAVAEDGDYGDGGCGAGGGKSFGSVACSICLDVVADSGDRSWAKLQCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSFPDFSMDDWTHEEDLYDLSYSEMAFGVQWCPFGSLTRLPSSFEDGDFSSTAYHDLLGQHAIFAEHTAVSSAAHPCPYIAYFGPIHPSSSSSSASEASSFSSHWNGPSVPSEMPSSYAFPAVDLHYQNWEHHSPPFSTMNNRVGADQPSVASIAQRSATRVGSELPRSGSVIHPFLVGHSSGARVGSSVASSMIPPYPGSNARARDRVQALQAYYQQQPSTTGTIRTPAISGARRSSSHRGPSQAPMASSSEQPNGFYFYSSASGGRNFQPENAIPNRFHAWERDHLPSFGLSQMERDPSGWGEIHQGAASVSDPSIRSSNFRQRHGSERTSSQNWS
SIO_010081: LOC111779956
subclass of: SO_0000673
so part of: LOC111779956
location: complement(join(971748..972222,972508..972889,972985..973010,975386..975444,976660..976829,977049..977229))
location: region:971748-977229:-1
so has part: feature:977049-977229:-1:exon
so has part: feature:976660-976829:-1:exon
so has part: feature:975386-975444:-1:exon
so has part: feature:972985-973010:-1:exon
so has part: feature:972508-972889:-1:exon
so has part: feature:971748-972222:-1:exon

XP_023515946.1
type: Protein
SIO_000068: ncbiprotein

position:971748:-1
position: 971748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:977229:-1
position: 977229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:977049-977229:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:976660-976829:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:975386-975444:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:972985-973010:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:972508-972889:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:971748-972222:-1:exon

LOC111779954
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111779954
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(980998..987881)
location: region:980998-987881:-1
so has part: feature:980998-987881:-1:exon
subclass of: SO_0000010

111779954
type: Gene
SIO_000068: ncbigene

position:980998:-1
position: 980998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:987881:-1
position: 987881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:980998-987881:-1:exon

LOC111779954
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111779954
product: phosphoacetylglucosamine mutase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_023660174.1
SIO_010081: LOC111779954
subclass of: SO_0000673
so part of: LOC111779954
location: complement(join(980998..981486,983364..983460,984235..984410,984708..985123,986466..986714,986792..986934,987051..987170,987354..987616,987727..987881))
location: region:980998-987881:-1
so has part: feature:987727-987881:-1:exon
so has part: feature:987354-987616:-1:exon
so has part: feature:987051-987170:-1:exon
so has part: feature:986792-986934:-1:exon
so has part: feature:986466-986714:-1:exon
so has part: feature:984708-985123:-1:exon
so has part: feature:984235-984410:-1:exon
so has part: feature:983364-983460:-1:exon
so has part: feature:980998-981486:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:987727-987881:-1:exon

position:987727:-1
position: 987727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:987354-987616:-1:exon

position:987354:-1
position: 987354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:987616:-1
position: 987616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:987051-987170:-1:exon

position:987051:-1
position: 987051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:987170:-1
position: 987170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:986792-986934:-1:exon

position:986792:-1
position: 986792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:986934:-1
position: 986934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:986466-986714:-1:exon

position:986466:-1
position: 986466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:986714:-1
position: 986714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:984708-985123:-1:exon

position:984708:-1
position: 984708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:985123:-1
position: 985123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:984235-984410:-1:exon

position:984235:-1
position: 984235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:984410:-1
position: 984410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:983364-983460:-1:exon

position:983364:-1
position: 983364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:983460:-1
position: 983460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:980998-981486:-1:exon

position:981486:-1
position: 981486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111779954
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111779954
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoacetylglucosamine mutase
translation: MNKEQLDLLLRESDRFPPPHGMRLSYGTAGFREDASVLLSTMYRVGILAALRALKTEAVIGLMITASHNKVSDNGVKIADPSGGMLTQEWEPFANALANAPSSRDLVRLINEFAEKENILLDGSKSAQILVARDTRPSGEVLLDAAKNGIDSIIGAVAQDMGILTTPQLHWMVHARNKGLESSELNYFNGLSNSFKWLLDSNPNNSELNDWDNRLVVDGANGVGGQKLELLKEKLNGLAIEIRNSGKGEGVLNERVGADFVQKEKIVPCNFGSQDVGIRCVSFDGDADRLVYFTVPSGSSNKINLVDGDKILSLFAIFIKEQLTILAARSKDTKIAFEPRLGVVQTAYANGASTQYLKDLGLEVVLTPTGVKYLHEKAAEYDIGIYFEANGHGTVLFSDYCISLLQPIYLELSNVFAGSEPHKAALRLLAISKLINQAVGDALSGLLLVEAILRHKNWSIHKWSELYQDLPSRQLKVKVVDRTAVETSNAETKVVKPPGLQEAIDLEIAKYPQGRCFIRPSGTEDVIRVYAEASTQEAADDLATSVAKLVDQFLGDGSSK
SIO_010081: LOC111779954
subclass of: SO_0000673
so part of: LOC111779954
location: complement(join(981329..981486,983364..983460,984235..984410,984708..985123,986466..986714,986792..986934,987051..987170,987354..987616,987727..987787))
location: region:981329-987787:-1
so has part: feature:987727-987787:-1:exon
so has part: feature:987354-987616:-1:exon
so has part: feature:987051-987170:-1:exon
so has part: feature:986792-986934:-1:exon
so has part: feature:986466-986714:-1:exon
so has part: feature:984708-985123:-1:exon
so has part: feature:984235-984410:-1:exon
so has part: feature:983364-983460:-1:exon
so has part: feature:981329-981486:-1:exon

XP_023515942.1
type: Protein
SIO_000068: ncbiprotein

position:981329:-1
position: 981329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:987787:-1
position: 987787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:987727-987787:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:987354-987616:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:987051-987170:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:986792-986934:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:986466-986714:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:984708-985123:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:984235-984410:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:983364-983460:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:981329-981486:-1:exon

TRNAQ-UUG
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAQ-UUG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 990404..990475
location: region:990404-990475:1
so has part: feature:990404-990475:1:exon
subclass of: SO_0000663

111780798
type: Gene
SIO_000068: ncbigene

position:990404:1
position: 990404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:990475:1
position: 990475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:990404-990475:1:exon

TRNAQ-UUG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAQ-UUG
product: tRNA-Gln
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glutamine (anticodon UUG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:990437..990439,aa:Gln,seq:ttg)
SIO_010081: TRNAQ-UUG
subclass of: SO_0000673
so part of: TRNAQ-UUG
location: 990404..990475
location: region:990404-990475:1
so has part: feature:990404-990475:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:990404-990475:1:exon

TRNAQ-UUG
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAQ-UUG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 995966..996037
location: region:995966-996037:1
so has part: feature:995966-996037:1:exon
subclass of: SO_0000663

111780809
type: Gene
SIO_000068: ncbigene

position:995966:1
position: 995966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:996037:1
position: 996037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:995966-996037:1:exon

TRNAQ-UUG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAQ-UUG
product: tRNA-Gln
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glutamine (anticodon UUG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:995999..996001,aa:Gln,seq:ttg)
SIO_010081: TRNAQ-UUG
subclass of: SO_0000673
so part of: TRNAQ-UUG
location: 995966..996037
location: region:995966-996037:1
so has part: feature:995966-996037:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:995966-996037:1:exon

LOC111779972
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111779972
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 999378..1001414
location: region:999378-1001414:1
so has part: feature:999378-1001414:1:exon
subclass of: SO_0000010

111779972
type: Gene
SIO_000068: ncbigene

position:999378:1
position: 999378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1001414:1
position: 1001414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:999378-1001414:1:exon

LOC111779972
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111779972
product: uncharacterized LOC111779972
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_023660196.1
SIO_010081: LOC111779972
subclass of: SO_0000673
so part of: LOC111779972
location: join(999378..999557,999696..999786,1001077..1001414)
location: region:999378-1001414:1
so has part: feature:999378-999557:1:exon
so has part: feature:999696-999786:1:exon
so has part: feature:1001077-1001414:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:999378-999557:1:exon

position:999557:1
position: 999557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:999696-999786:1:exon

position:999696:1
position: 999696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:999786:1
position: 999786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1001077-1001414:1:exon

position:1001077:1
position: 1001077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111779972
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111779972
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111779972
translation: MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQALTLAALAGAAVVEYYEHKSGAKAERYAKFLPVDNYSHKD
SIO_010081: LOC111779972
subclass of: SO_0000673
so part of: LOC111779972
location: join(999488..999557,999696..999786,1001077..1001212)
location: region:999488-1001212:1
so has part: feature:999488-999557:1:exon
so has part: feature:999696-999786:1:exon
so has part: feature:1001077-1001212:1:exon

XP_023515964.1
type: Protein
SIO_000068: ncbiprotein

position:999488:1
position: 999488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1001212:1
position: 1001212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:999488-999557:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:999696-999786:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1001077-1001212:1:exon

LOC111779968
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111779968
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1002712..1006543
location: region:1002712-1006543:1
so has part: feature:1002712-1006543:1:exon
subclass of: SO_0000010

111779968
type: Gene
SIO_000068: ncbigene

position:1002712:1
position: 1002712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1006543:1
position: 1006543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1002712-1006543:1:exon

LOC111779968
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111779968
product: SOSS complex subunit B homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_023660191.1
SIO_010081: LOC111779968
subclass of: SO_0000673
so part of: LOC111779968
location: join(1002712..1003016,1005874..1006543)
location: region:1002712-1006543:1
so has part: feature:1002712-1003016:1:exon
so has part: feature:1005874-1006543:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1002712-1003016:1:exon

position:1003016:1
position: 1003016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1005874-1006543:1:exon

position:1005874:1
position: 1005874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111779968
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 3664
gene: LOC111779968
product: SOSS complex subunit B homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XR_002812770.1
SIO_010081: LOC111779968
so part of: LOC111779968
location: join(1005095..1005484,1005874..1006317)
location: region:1005095-1006317:1
so has part: feature:1005095-1005484:1:exon
so has part: feature:1005874-1006317:1:exon

position:1005095:1
position: 1005095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1006317:1
position: 1006317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1005095-1005484:1:exon

position:1005484:1
position: 1005484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1005874-1006317:1:exon

LOC111779968
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111779968
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SOSS complex subunit B homolog
translation: MMISLKDLVPAAQNNVNTQFIVLDKGMTTIEGQNKTCQSLVADETAAVHFQLWGEECDVVEPSDILRLTNGIFSYSRNNNLVLRAGKRGKVEKVGEFNMVFVETPNMSEIHWVPDTTNSKKYVKESVLSPYSRIFPPIR
SIO_010081: LOC111779968
subclass of: SO_0000673
so part of: LOC111779968
location: 1005878..1006297
location: region:1005878-1006297:1
so has part: feature:1005878-1006297:1:exon

XP_023515959.1
type: Protein
SIO_000068: ncbiprotein

position:1005878:1
position: 1005878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1006297:1
position: 1006297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1005878-1006297:1:exon

LOC111779970
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111779970
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1023208..1026218
location: region:1023208-1026218:1
so has part: feature:1023208-1026218:1:exon
subclass of: SO_0000010

111779970
type: Gene
SIO_000068: ncbigene

position:1023208:1
position: 1023208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1026218:1
position: 1026218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1023208-1026218:1:exon

LOC111779970
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111779970
product: 60S ribosomal protein L22-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_023660194.1
SIO_010081: LOC111779970
subclass of: SO_0000673
so part of: LOC111779970
location: join(1023208..1023275,1023379..1023623,1025838..1026218)
location: region:1023208-1026218:1
so has part: feature:1023208-1023275:1:exon
so has part: feature:1023379-1023623:1:exon
so has part: feature:1025838-1026218:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1023208-1023275:1:exon

position:1023275:1
position: 1023275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1023379-1023623:1:exon

position:1023379:1
position: 1023379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1023623:1
position: 1023623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1025838-1026218:1:exon

position:1025838:1
position: 1025838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111779970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111779970
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L22-2-like
translation: MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED
SIO_010081: LOC111779970
subclass of: SO_0000673
so part of: LOC111779970
location: join(1023394..1023623,1025838..1025982)
location: region:1023394-1025982:1
so has part: feature:1023394-1023623:1:exon
so has part: feature:1025838-1025982:1:exon

XP_023515962.1
type: Protein
SIO_000068: ncbiprotein

position:1023394:1
position: 1023394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1025982:1
position: 1025982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1023394-1023623:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1025838-1025982:1:exon

LOC111779971
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111779971
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1038033..1041736
location: region:1038033-1041736:1
so has part: feature:1038033-1041736:1:exon
subclass of: SO_0000010

111779971
type: Gene
SIO_000068: ncbigene

position:1038033:1
position: 1038033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1041736:1
position: 1041736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1038033-1041736:1:exon

LOC111779971
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111779971
product: 50S ribosomal protein L18-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_023660195.1
SIO_010081: LOC111779971
subclass of: SO_0000673
so part of: LOC111779971
location: join(1038033..1038190,1041171..1041736)
location: region:1038033-1041736:1
so has part: feature:1038033-1038190:1:exon
so has part: feature:1041171-1041736:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1038033-1038190:1:exon

position:1038190:1
position: 1038190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1041171-1041736:1:exon

position:1041171:1
position: 1041171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111779971
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111779971
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111779971
translation: MVIPPPVRPPRLTQYLKPYILKMHFTNKYVSAQVIHSKTATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLMLKGIPAVCVHLKREQKYHGKVKAVVDSVREAGIKLL
SIO_010081: LOC111779971
subclass of: SO_0000673
so part of: LOC111779971
location: 1041201..1041545
location: region:1041201-1041545:1
so has part: feature:1041201-1041545:1:exon

XP_023515963.1
type: Protein
SIO_000068: ncbiprotein

position:1041201:1
position: 1041201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1041545:1
position: 1041545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1041201-1041545:1:exon

LOC111779958
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111779958
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1046068..1052566)
location: region:1046068-1052566:-1
so has part: feature:1046068-1052566:-1:exon
subclass of: SO_0000010

111779958
type: Gene
SIO_000068: ncbigene

position:1046068:-1
position: 1046068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1052566:-1
position: 1052566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1046068-1052566:-1:exon

LOC111779958
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111779958
product: uncharacterized LOC111779958
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_023660180.1
SIO_010081: LOC111779958
subclass of: SO_0000673
so part of: LOC111779958
location: complement(join(1046068..1046535,1046965..1047057,1048600..1048695,1049420..1049490,1049583..1049725,1049816..1049893,1052007..1052566))
location: region:1046068-1052566:-1
so has part: feature:1052007-1052566:-1:exon
so has part: feature:1049816-1049893:-1:exon
so has part: feature:1049583-1049725:-1:exon
so has part: feature:1049420-1049490:-1:exon
so has part: feature:1048600-1048695:-1:exon
so has part: feature:1046965-1047057:-1:exon
so has part: feature:1046068-1046535:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1052007-1052566:-1:exon

position:1052007:-1
position: 1052007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1049816-1049893:-1:exon

position:1049816:-1
position: 1049816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1049893:-1
position: 1049893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1049583-1049725:-1:exon

position:1049583:-1
position: 1049583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1049725:-1
position: 1049725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1049420-1049490:-1:exon

position:1049420:-1
position: 1049420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1049490:-1
position: 1049490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1048600-1048695:-1:exon

position:1048600:-1
position: 1048600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1048695:-1
position: 1048695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1046965-1047057:-1:exon

position:1046965:-1
position: 1046965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1047057:-1
position: 1047057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1046068-1046535:-1:exon

position:1046535:-1
position: 1046535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111779958
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111779958
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111779958
translation: MGNPSISLRFTMFLSLSLSITPFALSHNYTKPSPIPKAAPSDLLNLLGSKSQASTVNPSVAKEIKSCFKFLVPFHPTPSIAKCSSRRSLRSSRFDDRSRREEDELVWWPPQSVLELARLAVDSGGDPGAIHRTLDPAIIPIPNVHGSKKHKCELTRTPYGRRFISEELNSYLKFLFELIAARSAAMGLNVTLNRFDLFHGHLFLAFDNNRLGILFHAKEFPAYDEKAFPYNMGYCQIGSNVPYDASMNMRNILWLAPIPSNSTKDWEAPGVLVVLDARPDGIIYRDIIPDYVHIARTIYEDDLGDAVVDVNYLDTGNAVPNYQIFIC
SIO_010081: LOC111779958
subclass of: SO_0000673
so part of: LOC111779958
location: complement(join(1046453..1046535,1046965..1047057,1048600..1048695,1049420..1049490,1049583..1049725,1049816..1049893,1052007..1052426))
location: region:1046453-1052426:-1
so has part: feature:1052007-1052426:-1:exon
so has part: feature:1049816-1049893:-1:exon
so has part: feature:1049583-1049725:-1:exon
so has part: feature:1049420-1049490:-1:exon
so has part: feature:1048600-1048695:-1:exon
so has part: feature:1046965-1047057:-1:exon
so has part: feature:1046453-1046535:-1:exon

XP_023515948.1
type: Protein
SIO_000068: ncbiprotein

position:1046453:-1
position: 1046453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1052426:-1
position: 1052426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1052007-1052426:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1049816-1049893:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1049583-1049725:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1049420-1049490:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1048600-1048695:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1046965-1047057:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1046453-1046535:-1:exon

LOC111780753
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780753
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1058367..1058506
location: region:1058367-1058506:1
so has part: feature:1058367-1058506:1:exon
subclass of: SO_0000578

111780753
type: Gene
SIO_000068: ncbigene

position:1058367:1
position: 1058367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1058506:1
position: 1058506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1058367-1058506:1:exon

LOC111780753
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3664
nc RNA class: snoRNA
gene: LOC111780753
product: small nucleolar RNA Z247
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00321
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_002812896.1
SIO_010081: LOC111780753
subclass of: SO_0000673
so part of: LOC111780753
location: 1058367..1058506
location: region:1058367-1058506:1
so has part: feature:1058367-1058506:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1058367-1058506:1:exon

LOC111779963
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111779963
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1062403..1064598)
location: region:1062403-1064598:-1
so has part: feature:1062403-1064598:-1:exon
subclass of: SO_0000010

111779963
type: Gene
SIO_000068: ncbigene

position:1062403:-1
position: 1062403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1064598:-1
position: 1064598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1062403-1064598:-1:exon

LOC111779963
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111779963
product: REF/SRPP-like protein At3g05500
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_023660185.1
SIO_010081: LOC111779963
subclass of: SO_0000673
so part of: LOC111779963
location: complement(join(1062403..1062914,1064257..1064484,1064564..1064598))
location: region:1062403-1064598:-1
so has part: feature:1064564-1064598:-1:exon
so has part: feature:1064257-1064484:-1:exon
so has part: feature:1062403-1062914:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1064564-1064598:-1:exon

position:1064564:-1
position: 1064564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1064257-1064484:-1:exon

position:1064257:-1
position: 1064257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1064484:-1
position: 1064484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1062403-1062914:-1:exon

position:1062914:-1
position: 1062914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111779963
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111779963
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: REF/SRPP-like protein At3g05500
translation: MAARAEEGGLKYLEFVLKAAFRAATCLLKFYGYAKDWSGPLKFGLEAMEGTVKSVVGPLYNKLHGPSNEVLKFIDRKVDESVTTIDRLLPPTVKQVSSQAISAALQMPKVARNVASEIQRSGLKDTVTGIVKSVQPKAEQSAASAWHALNQLPVFSTVAQAIVPTAALYTEKYNDTVRASAEKGNKVASLLPLVPNEGIARVFGKIKI
SIO_010081: LOC111779963
subclass of: SO_0000673
so part of: LOC111779963
location: complement(join(1062519..1062914,1064257..1064484,1064564..1064566))
location: region:1062519-1064566:-1
so has part: feature:1064564-1064566:-1:exon
so has part: feature:1064257-1064484:-1:exon
so has part: feature:1062519-1062914:-1:exon

XP_023515953.1
type: Protein
SIO_000068: ncbiprotein

position:1062519:-1
position: 1062519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1064566:-1
position: 1064566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1064564-1064566:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1064257-1064484:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1062519-1062914:-1:exon

LOC111779947
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111779947
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1066797..1076408)
location: region:1066797-1076408:-1
so has part: feature:1066797-1076408:-1:exon
subclass of: SO_0000010

111779947
type: Gene
SIO_000068: ncbigene

position:1066797:-1
position: 1066797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1076408:-1
position: 1076408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1066797-1076408:-1:exon

LOC111779947
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111779947
product: respiratory burst oxidase homolog protein B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_023660165.1
SIO_010081: LOC111779947
subclass of: SO_0000673
so part of: LOC111779947
location: complement(join(1066797..1066955,1067093..1067592,1067668..1067741,1068942..1069044,1069142..1069257,1069330..1069425,1069518..1069904,1070991..1071425,1072450..1072563,1073187..1073235,1073350..1073509,1073619..1076408))
location: region:1066797-1076408:-1
so has part: feature:1073619-1076408:-1:exon
so has part: feature:1073350-1073509:-1:exon
so has part: feature:1073187-1073235:-1:exon
so has part: feature:1072450-1072563:-1:exon
so has part: feature:1070991-1071425:-1:exon
so has part: feature:1069518-1069904:-1:exon
so has part: feature:1069330-1069425:-1:exon
so has part: feature:1069142-1069257:-1:exon
so has part: feature:1068942-1069044:-1:exon
so has part: feature:1067668-1067741:-1:exon
so has part: feature:1067093-1067592:-1:exon
so has part: feature:1066797-1066955:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1073619-1076408:-1:exon

position:1073619:-1
position: 1073619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1073350-1073509:-1:exon

position:1073350:-1
position: 1073350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1073509:-1
position: 1073509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1073187-1073235:-1:exon

position:1073187:-1
position: 1073187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1073235:-1
position: 1073235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1072450-1072563:-1:exon

position:1072450:-1
position: 1072450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1072563:-1
position: 1072563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1070991-1071425:-1:exon

position:1070991:-1
position: 1070991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1071425:-1
position: 1071425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1069518-1069904:-1:exon

position:1069518:-1
position: 1069518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1069904:-1
position: 1069904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1069330-1069425:-1:exon

position:1069330:-1
position: 1069330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1069425:-1
position: 1069425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1069142-1069257:-1:exon

position:1069142:-1
position: 1069142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1069257:-1
position: 1069257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1068942-1069044:-1:exon

position:1068942:-1
position: 1068942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1069044:-1
position: 1069044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1067668-1067741:-1:exon

position:1067668:-1
position: 1067668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1067741:-1
position: 1067741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1067093-1067592:-1:exon

position:1067093:-1
position: 1067093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1067592:-1
position: 1067592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1066797-1066955:-1:exon

position:1066955:-1
position: 1066955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111779947
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111779947
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: respiratory burst oxidase homolog protein B-like
translation: MEGEENKPADSWSDTESTGSSKRVAFSGPLPGPSVAYKRTNSYSSSSTRSTMRIKDDDQYVEITLDVRDDSVSVQNIKGGDSETAMLASRLETKRPTLGSQLSFKLKQVSQELKRMTSSKSFNRIDRTKSGASRALNGLRFMTKNVGSEAWSEIENRFNELAINGELPKSLFARCIGMNESSEFAGELFEALARRRGITSSSITKGELREFWEQISDESFDARLQIFFDMVDKNADGRITGKEVKEIIALSASANKLSKIQDDAEEYAALIMEELDPDNLGYIELYNLEMLLLQAPNQASARNRVTDSRVLSQLLSQKLVPTKEYNPIKRTYRSLRYFVEDNRKRIWVFSLWLAVCAALFAWKFVQYRRRAVFHVMGYCVTTAKGAAETLKFNMAIVLLPVCRNTITWLRSTTKLGAVIPFDDNVNFHKVIAVGIAIGVLLHAGAHLTCDFPKLLHATDAQYEPMKPFFGEVRPNNYWWFVKGTEGWTGVVMVVLMIIAFTLAQPWFRRNRLNLPKIIKRLTGFNAFWYSHHLFIIVYVLFIIHGYYLYLSKKWYKKTTWMYLAVPVLIYACERLIRAFRSGYKTVRISKVAVYPGNVLALQMSKPHGFKYTSGQYIFVNCSAISPFQWHPFSITSAPGDDYLSIHIRTVGDWTSQLKTIFSKVCQPPSVNQSGLLRADIGQSSNKIRLPRLLIDGPYGAPAQDYKQYDVLLLVGLGIGATPLISIVKDVLNNIKEQKDIENGIADKHAKPFVTKRAYFYWVTREQGSFEWFRGVMDEVAENDRDRVIELHNYCTSVYEEGDARSALITMLQDLNHAKNGVDIVSGTRVKTHFARPNWRNVLKRVAINHPDQRVGVFYCGAQGLVGELRRLSQDFSRKTTTKFDFHKENF
SIO_010081: LOC111779947
subclass of: SO_0000673
so part of: LOC111779947
location: complement(join(1066846..1066955,1067093..1067592,1067668..1067741,1068942..1069044,1069142..1069257,1069330..1069425,1069518..1069904,1070991..1071425,1072450..1072563,1073187..1073235,1073350..1073509,1073619..1074147))
location: region:1066846-1074147:-1
so has part: feature:1073619-1074147:-1:exon
so has part: feature:1073350-1073509:-1:exon
so has part: feature:1073187-1073235:-1:exon
so has part: feature:1072450-1072563:-1:exon
so has part: feature:1070991-1071425:-1:exon
so has part: feature:1069518-1069904:-1:exon
so has part: feature:1069330-1069425:-1:exon
so has part: feature:1069142-1069257:-1:exon
so has part: feature:1068942-1069044:-1:exon
so has part: feature:1067668-1067741:-1:exon
so has part: feature:1067093-1067592:-1:exon
so has part: feature:1066846-1066955:-1:exon

XP_023515933.1
type: Protein
SIO_000068: ncbiprotein

position:1066846:-1
position: 1066846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1074147:-1
position: 1074147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1073619-1074147:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1073350-1073509:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1073187-1073235:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1072450-1072563:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1070991-1071425:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1069518-1069904:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1069330-1069425:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1069142-1069257:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1068942-1069044:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1067668-1067741:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1067093-1067592:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1066846-1066955:-1:exon

LOC111779976
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111779976
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1073838..1094903
location: region:1073838-1094903:1
so has part: feature:1073838-1094903:1:exon
subclass of: SO_0000011

111779976
type: Gene
SIO_000068: ncbigene

position:1073838:1
position: 1073838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1094903:1
position: 1094903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1073838-1094903:1:exon

LOC111779976
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3664
nc RNA class: lncRNA
gene: LOC111779976
product: uncharacterized LOC111779976, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_002812775.1
SIO_010081: LOC111779976
subclass of: SO_0000673
so part of: LOC111779976
location: join(1073838..1073956,1074041..1074125,1094307..1094903)
location: region:1073838-1094903:1
so has part: feature:1073838-1073956:1:exon
so has part: feature:1074041-1074125:1:exon
so has part: feature:1094307-1094903:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1073838-1073956:1:exon

position:1073956:1
position: 1073956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1074041-1074125:1:exon

position:1074041:1
position: 1074041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1074125:1
position: 1074125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1094307-1094903:1:exon

position:1094307:1
position: 1094307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111779976
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3664
nc RNA class: lncRNA
gene: LOC111779976
product: uncharacterized LOC111779976, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_002812776.1
SIO_010081: LOC111779976
subclass of: SO_0000673
so part of: LOC111779976
location: join(1073838..1073956,1074041..1074125,1083827..1084229)
location: region:1073838-1084229:1
so has part: feature:1073838-1073956:1:exon
so has part: feature:1074041-1074125:1:exon
so has part: feature:1083827-1084229:1:exon

position:1084229:1
position: 1084229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1073838-1073956:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1074041-1074125:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1083827-1084229:1:exon

position:1083827:1
position: 1083827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111779974
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111779974
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1096607..1097061)
location: region:1096607-1097061:-1
so has part: feature:1096607-1097061:-1:exon
subclass of: SO_0000011

111779974
type: Gene
SIO_000068: ncbigene

position:1096607:-1
position: 1096607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1097061:-1
position: 1097061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1096607-1097061:-1:exon

LOC111779974
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 3664
nc RNA class: lncRNA
gene: LOC111779974
product: uncharacterized LOC111779974
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XR_002812773.1
SIO_010081: LOC111779974
subclass of: SO_0000673
so part of: LOC111779974
location: complement(join(1096607..1096906,1096973..1097061))
location: region:1096607-1097061:-1
so has part: feature:1096973-1097061:-1:exon
so has part: feature:1096607-1096906:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1096973-1097061:-1:exon

position:1096973:-1
position: 1096973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1096607-1096906:-1:exon

position:1096906:-1
position: 1096906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111779948
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111779948
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1096905..1100162
location: region:1096905-1100162:1
so has part: feature:1096905-1100162:1:exon
subclass of: SO_0000010

111779948
type: Gene
SIO_000068: ncbigene

position:1096905:1
position: 1096905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1100162:1
position: 1100162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1096905-1100162:1:exon

LOC111779948
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111779948
product: formin-like protein 11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_023660166.1
SIO_010081: LOC111779948
subclass of: SO_0000673
so part of: LOC111779948
location: join(1096905..1098569,1098638..1098828,1098934..1099169,1099449..1100162)
location: region:1096905-1100162:1
so has part: feature:1096905-1098569:1:exon
so has part: feature:1098638-1098828:1:exon
so has part: feature:1098934-1099169:1:exon
so has part: feature:1099449-1100162:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1096905-1098569:1:exon

position:1098569:1
position: 1098569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1098638-1098828:1:exon

position:1098638:1
position: 1098638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1098828:1
position: 1098828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1098934-1099169:1:exon

position:1098934:1
position: 1098934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1099169:1
position: 1099169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1099449-1100162:1:exon

position:1099449:1
position: 1099449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111779948
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111779948
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: formin-like protein 11
translation: MGCVLMIIIFMSIPFSTQNSHILIANSPLNAAESFDVEELERVSGEDESGGNEPFILERFRALLGLKSLQSDVSFSPSPSPSPSPAAIAPSPVHVATHRVHIHEHSHPHQLRLHKRRPVYKPKREEEDAREGRVRKILVAVLVSAGVTILICSIIAFWVCKKFKTQREEATEKLSVKSETVEKSAKPNSPKSPKSGLDPFDLGMLGMDAEEEQTQCSVSEKEISVHKEREMGQEMLDSEFDNVSVSSTKEMMYVHEEDDSKSIQCVSAKADSSSGDRITPVKSCSSDDEESFHSCGDSNLSNARLSNASESSSANVITKSTCSVPIMNLPSKLETTQCDDSNKPSTSDQSHITLSPCNPESKMQMVSLSVGGQKNVPSLSPPPPPPPPPPPITDRSSFSLSSPFSTGSTSSSALLRSSSPAMSDSSSLSQIPWNDLTSPNPAAKPSLPSSSIPPPPSPPPSLKAKAYSFKTPPPLPSKLPQFMAFGKEGNSRPKLKPLHWDKVRAAPDRSMVWDKLRWSSFELDEEMIESLFGYNQHDSMKNGDASNKSPSPTKHILEAKRLQNLTILLKALNLSTEQVCEAIEQGTGMRLRQLEALVKMVPTQEEEAKLLSYEGNIGELGFTENFVISILKIPFAFQRVEAMLYRETFEDEVNHLRNSFSILEEACKELKSSRLFLKLLEAVLKTGNRMNVGTSRGGARAFKLDALLKLSDVKGTDGKTSLLHFVVQEMIRSEGIRVSGSIMGKISQKNKSRTIEERENDYRRMGLDLVSGLSTELHNVKRAATIDLKVVASLRGNLNDGMAKLQKLVGKELSVDERSGNFVGAMKGFMSYVKKTMEEVRKDEEGVMSSVREITEYFHGNVSKEETNPLRIFVIVRDFLGMLDSVCKSFKIGSS
SIO_010081: LOC111779948
subclass of: SO_0000673
so part of: LOC111779948
location: join(1097005..1098569,1098638..1098828,1098934..1099169,1099449..1100144)
location: region:1097005-1100144:1
so has part: feature:1097005-1098569:1:exon
so has part: feature:1098638-1098828:1:exon
so has part: feature:1098934-1099169:1:exon
so has part: feature:1099449-1100144:1:exon

XP_023515934.1
type: Protein
SIO_000068: ncbiprotein

position:1097005:1
position: 1097005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1100144:1
position: 1100144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1097005-1098569:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1098638-1098828:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1098934-1099169:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1099449-1100144:1:exon

TRNAG-CCC
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAG-CCC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1102568..1102638)
location: region:1102568-1102638:-1
so has part: feature:1102568-1102638:-1:exon
subclass of: SO_0000663

111780787
type: Gene
SIO_000068: ncbigene

position:1102568:-1
position: 1102568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1102638:-1
position: 1102638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1102568-1102638:-1:exon

TRNAG-CCC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAG-CCC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon CCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1102604..1102606),aa:Gly, seq:ccc)
SIO_010081: TRNAG-CCC
subclass of: SO_0000673
so part of: TRNAG-CCC
location: complement(1102568..1102638)
location: region:1102568-1102638:-1
so has part: feature:1102568-1102638:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1102568-1102638:-1:exon

TRNAG-CCC
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAG-CCC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1102703..1102773)
location: region:1102703-1102773:-1
so has part: feature:1102703-1102773:-1:exon
subclass of: SO_0000663

111780788
type: Gene
SIO_000068: ncbigene

position:1102703:-1
position: 1102703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1102773:-1
position: 1102773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1102703-1102773:-1:exon

TRNAG-CCC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAG-CCC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon CCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1102739..1102741),aa:Gly, seq:ccc)
SIO_010081: TRNAG-CCC
subclass of: SO_0000673
so part of: TRNAG-CCC
location: complement(1102703..1102773)
location: region:1102703-1102773:-1
so has part: feature:1102703-1102773:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1102703-1102773:-1:exon

TRNAG-CCC
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAG-CCC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1102939..1103009)
location: region:1102939-1103009:-1
so has part: feature:1102939-1103009:-1:exon
subclass of: SO_0000663

111780789
type: Gene
SIO_000068: ncbigene

position:1102939:-1
position: 1102939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1103009:-1
position: 1103009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1102939-1103009:-1:exon

TRNAG-CCC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAG-CCC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon CCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1102975..1102977),aa:Gly, seq:ccc)
SIO_010081: TRNAG-CCC
subclass of: SO_0000673
so part of: TRNAG-CCC
location: complement(1102939..1103009)
location: region:1102939-1103009:-1
so has part: feature:1102939-1103009:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1102939-1103009:-1:exon

TRNAG-CCC
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAG-CCC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1103124..1103194)
location: region:1103124-1103194:-1
so has part: feature:1103124-1103194:-1:exon
subclass of: SO_0000663

111780790
type: Gene
SIO_000068: ncbigene

position:1103124:-1
position: 1103124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1103194:-1
position: 1103194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1103124-1103194:-1:exon

TRNAG-CCC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAG-CCC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon CCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1103160..1103162),aa:Gly, seq:ccc)
SIO_010081: TRNAG-CCC
subclass of: SO_0000673
so part of: TRNAG-CCC
location: complement(1103124..1103194)
location: region:1103124-1103194:-1
so has part: feature:1103124-1103194:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1103124-1103194:-1:exon

TRNAG-CCC
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAG-CCC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1104294..1104364)
location: region:1104294-1104364:-1
so has part: feature:1104294-1104364:-1:exon
subclass of: SO_0000663

111780791
type: Gene
SIO_000068: ncbigene

position:1104294:-1
position: 1104294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1104364:-1
position: 1104364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1104294-1104364:-1:exon

TRNAG-CCC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAG-CCC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon CCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1104330..1104332),aa:Gly, seq:ccc)
SIO_010081: TRNAG-CCC
subclass of: SO_0000673
so part of: TRNAG-CCC
location: complement(1104294..1104364)
location: region:1104294-1104364:-1
so has part: feature:1104294-1104364:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1104294-1104364:-1:exon

TRNAG-CCC
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAG-CCC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1104530..1104600)
location: region:1104530-1104600:-1
so has part: feature:1104530-1104600:-1:exon
subclass of: SO_0000663

111780792
type: Gene
SIO_000068: ncbigene

position:1104530:-1
position: 1104530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1104600:-1
position: 1104600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1104530-1104600:-1:exon

TRNAG-CCC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAG-CCC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon CCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1104566..1104568),aa:Gly, seq:ccc)
SIO_010081: TRNAG-CCC
subclass of: SO_0000673
so part of: TRNAG-CCC
location: complement(1104530..1104600)
location: region:1104530-1104600:-1
so has part: feature:1104530-1104600:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1104530-1104600:-1:exon

TRNAG-CCC
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAG-CCC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1104768..1104838)
location: region:1104768-1104838:-1
so has part: feature:1104768-1104838:-1:exon
subclass of: SO_0000663

111780793
type: Gene
SIO_000068: ncbigene

position:1104768:-1
position: 1104768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1104838:-1
position: 1104838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1104768-1104838:-1:exon

TRNAG-CCC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAG-CCC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon CCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1104804..1104806),aa:Gly, seq:ccc)
SIO_010081: TRNAG-CCC
subclass of: SO_0000673
so part of: TRNAG-CCC
location: complement(1104768..1104838)
location: region:1104768-1104838:-1
so has part: feature:1104768-1104838:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1104768-1104838:-1:exon

TRNAG-CCC
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAG-CCC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1105006..1105076)
location: region:1105006-1105076:-1
so has part: feature:1105006-1105076:-1:exon
subclass of: SO_0000663

111780794
type: Gene
SIO_000068: ncbigene

position:1105006:-1
position: 1105006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1105076:-1
position: 1105076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1105006-1105076:-1:exon

TRNAG-CCC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAG-CCC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon CCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1105042..1105044),aa:Gly, seq:ccc)
SIO_010081: TRNAG-CCC
subclass of: SO_0000673
so part of: TRNAG-CCC
location: complement(1105006..1105076)
location: region:1105006-1105076:-1
so has part: feature:1105006-1105076:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1105006-1105076:-1:exon

TRNAR-CCU
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAR-CCU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1105368..1105438)
location: region:1105368-1105438:-1
so has part: feature:1105368-1105438:-1:exon
subclass of: SO_0000663

111780795
type: Gene
SIO_000068: ncbigene

position:1105368:-1
position: 1105368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1105438:-1
position: 1105438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1105368-1105438:-1:exon

TRNAR-CCU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAR-CCU
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA arginine (anticodon CCU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1105404..1105406),aa:Arg, seq:cct)
SIO_010081: TRNAR-CCU
subclass of: SO_0000673
so part of: TRNAR-CCU
location: complement(1105368..1105438)
location: region:1105368-1105438:-1
so has part: feature:1105368-1105438:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1105368-1105438:-1:exon

TRNAG-CCC
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAG-CCC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1105604..1105674)
location: region:1105604-1105674:-1
so has part: feature:1105604-1105674:-1:exon
subclass of: SO_0000663

111780796
type: Gene
SIO_000068: ncbigene

position:1105604:-1
position: 1105604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1105674:-1
position: 1105674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1105604-1105674:-1:exon

TRNAG-CCC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAG-CCC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon CCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1105640..1105642),aa:Gly, seq:ccc)
SIO_010081: TRNAG-CCC
subclass of: SO_0000673
so part of: TRNAG-CCC
location: complement(1105604..1105674)
location: region:1105604-1105674:-1
so has part: feature:1105604-1105674:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1105604-1105674:-1:exon

TRNAG-CCC
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAG-CCC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1105840..1105910)
location: region:1105840-1105910:-1
so has part: feature:1105840-1105910:-1:exon
subclass of: SO_0000663

111780799
type: Gene
SIO_000068: ncbigene

position:1105840:-1
position: 1105840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1105910:-1
position: 1105910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1105840-1105910:-1:exon

TRNAG-CCC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAG-CCC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon CCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1105876..1105878),aa:Gly, seq:ccc)
SIO_010081: TRNAG-CCC
subclass of: SO_0000673
so part of: TRNAG-CCC
location: complement(1105840..1105910)
location: region:1105840-1105910:-1
so has part: feature:1105840-1105910:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1105840-1105910:-1:exon

TRNAW-CCA
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAW-CCA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1106712..1106782)
location: region:1106712-1106782:-1
so has part: feature:1106712-1106782:-1:exon
subclass of: SO_0000663

111780800
type: Gene
SIO_000068: ncbigene

position:1106712:-1
position: 1106712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1106782:-1
position: 1106782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1106712-1106782:-1:exon

TRNAW-CCA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAW-CCA
product: tRNA-Trp
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA tryptophan (anticodon CCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1106748..1106750),aa:Trp, seq:cca)
SIO_010081: TRNAW-CCA
subclass of: SO_0000673
so part of: TRNAW-CCA
location: complement(1106712..1106782)
location: region:1106712-1106782:-1
so has part: feature:1106712-1106782:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1106712-1106782:-1:exon

TRNAG-CCC
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAG-CCC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1106887..1106957)
location: region:1106887-1106957:-1
so has part: feature:1106887-1106957:-1:exon
subclass of: SO_0000663

111780801
type: Gene
SIO_000068: ncbigene

position:1106887:-1
position: 1106887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1106957:-1
position: 1106957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1106887-1106957:-1:exon

TRNAG-CCC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAG-CCC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon CCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1106923..1106925),aa:Gly, seq:ccc)
SIO_010081: TRNAG-CCC
subclass of: SO_0000673
so part of: TRNAG-CCC
location: complement(1106887..1106957)
location: region:1106887-1106957:-1
so has part: feature:1106887-1106957:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1106887-1106957:-1:exon

TRNAG-CCC
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAG-CCC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1109769..1109839)
location: region:1109769-1109839:-1
so has part: feature:1109769-1109839:-1:exon
subclass of: SO_0000663

111780802
type: Gene
SIO_000068: ncbigene

position:1109769:-1
position: 1109769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1109839:-1
position: 1109839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1109769-1109839:-1:exon

TRNAG-CCC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAG-CCC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon CCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1109805..1109807),aa:Gly, seq:ccc)
SIO_010081: TRNAG-CCC
subclass of: SO_0000673
so part of: TRNAG-CCC
location: complement(1109769..1109839)
location: region:1109769-1109839:-1
so has part: feature:1109769-1109839:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1109769-1109839:-1:exon

TRNAG-CCC
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAG-CCC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1109969..1110039)
location: region:1109969-1110039:-1
so has part: feature:1109969-1110039:-1:exon
subclass of: SO_0000663

111780803
type: Gene
SIO_000068: ncbigene

position:1109969:-1
position: 1109969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1110039:-1
position: 1110039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1109969-1110039:-1:exon

TRNAG-CCC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAG-CCC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon CCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1110005..1110007),aa:Gly, seq:ccc)
SIO_010081: TRNAG-CCC
subclass of: SO_0000673
so part of: TRNAG-CCC
location: complement(1109969..1110039)
location: region:1109969-1110039:-1
so has part: feature:1109969-1110039:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1109969-1110039:-1:exon

TRNAG-CCC
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAG-CCC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1110191..1110261)
location: region:1110191-1110261:-1
so has part: feature:1110191-1110261:-1:exon
subclass of: SO_0000663

111780804
type: Gene
SIO_000068: ncbigene

position:1110191:-1
position: 1110191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1110261:-1
position: 1110261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1110191-1110261:-1:exon

TRNAG-CCC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAG-CCC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon CCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1110227..1110229),aa:Gly, seq:ccc)
SIO_010081: TRNAG-CCC
subclass of: SO_0000673
so part of: TRNAG-CCC
location: complement(1110191..1110261)
location: region:1110191-1110261:-1
so has part: feature:1110191-1110261:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1110191-1110261:-1:exon

TRNAG-CCC
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAG-CCC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1110412..1110482)
location: region:1110412-1110482:-1
so has part: feature:1110412-1110482:-1:exon
subclass of: SO_0000663

111780805
type: Gene
SIO_000068: ncbigene

position:1110412:-1
position: 1110412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1110482:-1
position: 1110482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1110412-1110482:-1:exon

TRNAG-CCC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAG-CCC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon CCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1110448..1110450),aa:Gly, seq:ccc)
SIO_010081: TRNAG-CCC
subclass of: SO_0000673
so part of: TRNAG-CCC
location: complement(1110412..1110482)
location: region:1110412-1110482:-1
so has part: feature:1110412-1110482:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1110412-1110482:-1:exon

TRNAG-CCC
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAG-CCC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1110634..1110704)
location: region:1110634-1110704:-1
so has part: feature:1110634-1110704:-1:exon
subclass of: SO_0000663

111780806
type: Gene
SIO_000068: ncbigene

position:1110634:-1
position: 1110634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1110704:-1
position: 1110704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1110634-1110704:-1:exon

TRNAG-CCC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAG-CCC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon CCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1110670..1110672),aa:Gly, seq:ccc)
SIO_010081: TRNAG-CCC
subclass of: SO_0000673
so part of: TRNAG-CCC
location: complement(1110634..1110704)
location: region:1110634-1110704:-1
so has part: feature:1110634-1110704:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1110634-1110704:-1:exon

TRNAG-CCC
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAG-CCC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1110834..1110904)
location: region:1110834-1110904:-1
so has part: feature:1110834-1110904:-1:exon
subclass of: SO_0000663

111780807
type: Gene
SIO_000068: ncbigene

position:1110834:-1
position: 1110834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1110904:-1
position: 1110904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1110834-1110904:-1:exon

TRNAG-CCC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAG-CCC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon CCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1110870..1110872),aa:Gly, seq:ccc)
SIO_010081: TRNAG-CCC
subclass of: SO_0000673
so part of: TRNAG-CCC
location: complement(1110834..1110904)
location: region:1110834-1110904:-1
so has part: feature:1110834-1110904:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1110834-1110904:-1:exon

TRNAG-CCC
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAG-CCC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1111056..1111126)
location: region:1111056-1111126:-1
so has part: feature:1111056-1111126:-1:exon
subclass of: SO_0000663

111780808
type: Gene
SIO_000068: ncbigene

position:1111056:-1
position: 1111056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1111126:-1
position: 1111126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1111056-1111126:-1:exon

TRNAG-CCC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAG-CCC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon CCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1111092..1111094),aa:Gly, seq:ccc)
SIO_010081: TRNAG-CCC
subclass of: SO_0000673
so part of: TRNAG-CCC
location: complement(1111056..1111126)
location: region:1111056-1111126:-1
so has part: feature:1111056-1111126:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1111056-1111126:-1:exon

TRNAG-GCC
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAG-GCC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1111500..1111570)
location: region:1111500-1111570:-1
so has part: feature:1111500-1111570:-1:exon
subclass of: SO_0000663

111780810
type: Gene
SIO_000068: ncbigene

position:1111500:-1
position: 1111500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1111570:-1
position: 1111570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1111500-1111570:-1:exon

TRNAG-GCC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAG-GCC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon GCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1111536..1111538),aa:Gly, seq:gcc)
SIO_010081: TRNAG-GCC
subclass of: SO_0000673
so part of: TRNAG-GCC
location: complement(1111500..1111570)
location: region:1111500-1111570:-1
so has part: feature:1111500-1111570:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1111500-1111570:-1:exon

TRNAG-CCC
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAG-CCC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1111944..1112014)
location: region:1111944-1112014:-1
so has part: feature:1111944-1112014:-1:exon
subclass of: SO_0000663

111780811
type: Gene
SIO_000068: ncbigene

position:1111944:-1
position: 1111944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1112014:-1
position: 1112014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1111944-1112014:-1:exon

TRNAG-CCC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAG-CCC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon CCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1111980..1111982),aa:Gly, seq:ccc)
SIO_010081: TRNAG-CCC
subclass of: SO_0000673
so part of: TRNAG-CCC
location: complement(1111944..1112014)
location: region:1111944-1112014:-1
so has part: feature:1111944-1112014:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1111944-1112014:-1:exon

TRNAG-CCC
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAG-CCC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1114882..1114953)
location: region:1114882-1114953:-1
so has part: feature:1114882-1114953:-1:exon
subclass of: SO_0000663

111780812
type: Gene
SIO_000068: ncbigene

position:1114882:-1
position: 1114882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1114953:-1
position: 1114953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1114882-1114953:-1:exon

TRNAG-CCC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAG-CCC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon CCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1114919..1114921),aa:Gly, seq:ccc)
SIO_010081: TRNAG-CCC
subclass of: SO_0000673
so part of: TRNAG-CCC
location: complement(1114882..1114953)
location: region:1114882-1114953:-1
so has part: feature:1114882-1114953:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1114882-1114953:-1:exon

TRNAG-CCC
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAG-CCC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1115335..1115404)
location: region:1115335-1115404:-1
so has part: feature:1115335-1115404:-1:exon
subclass of: SO_0000663

111780813
type: Gene
SIO_000068: ncbigene

position:1115335:-1
position: 1115335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1115404:-1
position: 1115404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1115335-1115404:-1:exon

TRNAG-CCC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAG-CCC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon CCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1115370..1115372),aa:Gly, seq:ccc)
SIO_010081: TRNAG-CCC
subclass of: SO_0000673
so part of: TRNAG-CCC
location: complement(1115335..1115404)
location: region:1115335-1115404:-1
so has part: feature:1115335-1115404:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1115335-1115404:-1:exon

TRNAN-GUU
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAN-GUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1134174..1134247
location: region:1134174-1134247:1
so has part: feature:1134174-1134247:1:exon
subclass of: SO_0000663

111780821
type: Gene
SIO_000068: ncbigene

position:1134174:1
position: 1134174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1134247:1
position: 1134247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1134174-1134247:1:exon

TRNAN-GUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAN-GUU
product: tRNA-Asn
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA asparagine (anticodon GUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1134208..1134210,aa:Asn,seq:gtt)
SIO_010081: TRNAN-GUU
subclass of: SO_0000673
so part of: TRNAN-GUU
location: 1134174..1134247
location: region:1134174-1134247:1
so has part: feature:1134174-1134247:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1134174-1134247:1:exon

TRNAL-UAA
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAL-UAA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1136749..1136831
location: region:1136749-1136831:1
so has part: feature:1136749-1136831:1:exon
subclass of: SO_0000663

111780833
type: Gene
SIO_000068: ncbigene

position:1136749:1
position: 1136749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1136831:1
position: 1136831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1136749-1136831:1:exon

TRNAL-UAA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAL-UAA
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA leucine (anticodon UAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1136782..1136784,aa:Leu,seq:taa)
SIO_010081: TRNAL-UAA
subclass of: SO_0000673
so part of: TRNAL-UAA
location: 1136749..1136831
location: region:1136749-1136831:1
so has part: feature:1136749-1136831:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1136749-1136831:1:exon

TRNAG-CCC
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAG-CCC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1173227..1173297
location: region:1173227-1173297:1
so has part: feature:1173227-1173297:1:exon
subclass of: SO_0000663

111780844
type: Gene
SIO_000068: ncbigene

position:1173227:1
position: 1173227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1173297:1
position: 1173297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1173227-1173297:1:exon

TRNAG-CCC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAG-CCC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon CCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1173259..1173261,aa:Gly,seq:ccc)
SIO_010081: TRNAG-CCC
subclass of: SO_0000673
so part of: TRNAG-CCC
location: 1173227..1173297
location: region:1173227-1173297:1
so has part: feature:1173227-1173297:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1173227-1173297:1:exon

TRNAL-UAA
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAL-UAA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1176905..1176987
location: region:1176905-1176987:1
so has part: feature:1176905-1176987:1:exon
subclass of: SO_0000663

111780852
type: Gene
SIO_000068: ncbigene

position:1176905:1
position: 1176905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1176987:1
position: 1176987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1176905-1176987:1:exon

TRNAL-UAA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAL-UAA
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA leucine (anticodon UAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1176938..1176940,aa:Leu,seq:taa)
SIO_010081: TRNAL-UAA
subclass of: SO_0000673
so part of: TRNAL-UAA
location: 1176905..1176987
location: region:1176905-1176987:1
so has part: feature:1176905-1176987:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1176905-1176987:1:exon

TRNAE-CUC
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAE-CUC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1177207..1177277
location: region:1177207-1177277:1
so has part: feature:1177207-1177277:1:exon
subclass of: SO_0000663

111780853
type: Gene
SIO_000068: ncbigene

position:1177207:1
position: 1177207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1177277:1
position: 1177277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1177207-1177277:1:exon

TRNAE-CUC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAE-CUC
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glutamic acid (anticodon CUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1177239..1177241,aa:Glu,seq:ctc)
SIO_010081: TRNAE-CUC
subclass of: SO_0000673
so part of: TRNAE-CUC
location: 1177207..1177277
location: region:1177207-1177277:1
so has part: feature:1177207-1177277:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1177207-1177277:1:exon

TRNAG-CCC
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAG-CCC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1178854..1178924
location: region:1178854-1178924:1
so has part: feature:1178854-1178924:1:exon
subclass of: SO_0000663

111780854
type: Gene
SIO_000068: ncbigene

position:1178854:1
position: 1178854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1178924:1
position: 1178924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1178854-1178924:1:exon

TRNAG-CCC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAG-CCC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon CCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1178886..1178888,aa:Gly,seq:ccc)
SIO_010081: TRNAG-CCC
subclass of: SO_0000673
so part of: TRNAG-CCC
location: 1178854..1178924
location: region:1178854-1178924:1
so has part: feature:1178854-1178924:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1178854-1178924:1:exon

TRNAL-UAA
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAL-UAA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1191659..1191741
location: region:1191659-1191741:1
so has part: feature:1191659-1191741:1:exon
subclass of: SO_0000663

111780856
type: Gene
SIO_000068: ncbigene

position:1191659:1
position: 1191659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1191741:1
position: 1191741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1191659-1191741:1:exon

TRNAL-UAA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAL-UAA
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA leucine (anticodon UAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1191692..1191694,aa:Leu,seq:taa)
SIO_010081: TRNAL-UAA
subclass of: SO_0000673
so part of: TRNAL-UAA
location: 1191659..1191741
location: region:1191659-1191741:1
so has part: feature:1191659-1191741:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1191659-1191741:1:exon

LOC111779950
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111779950
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1194195..1205716)
location: region:1194195-1205716:-1
so has part: feature:1194195-1205716:-1:exon
subclass of: SO_0000010

111779950
type: Gene
SIO_000068: ncbigene

position:1194195:-1
position: 1194195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1205716:-1
position: 1205716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1194195-1205716:-1:exon

LOC111779950
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111779950
product: transcription factor IIIB 90 kDa subunit-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_023660168.1
SIO_010081: LOC111779950
subclass of: SO_0000673
so part of: LOC111779950
location: complement(join(1194195..1194659,1195488..1195541,1195652..1195741,1195897..1196034,1196103..1196183,1196988..1197103,1197385..1197466,1198468..1198623,1198703..1198870,1199657..1199737,1201167..1201253,1201339..1201433,1202068..1202180,1202295..1202351,1204444..1204520,1204619..1204704,1204809..1204884,1205017..1205098,1205199..1205281,1205585..1205716))
location: region:1194195-1205716:-1
so has part: feature:1205585-1205716:-1:exon
so has part: feature:1205199-1205281:-1:exon
so has part: feature:1205017-1205098:-1:exon
so has part: feature:1204809-1204884:-1:exon
so has part: feature:1204619-1204704:-1:exon
so has part: feature:1204444-1204520:-1:exon
so has part: feature:1202295-1202351:-1:exon
so has part: feature:1202068-1202180:-1:exon
so has part: feature:1201339-1201433:-1:exon
so has part: feature:1201167-1201253:-1:exon
so has part: feature:1199657-1199737:-1:exon
so has part: feature:1198703-1198870:-1:exon
so has part: feature:1198468-1198623:-1:exon
so has part: feature:1197385-1197466:-1:exon
so has part: feature:1196988-1197103:-1:exon
so has part: feature:1196103-1196183:-1:exon
so has part: feature:1195897-1196034:-1:exon
so has part: feature:1195652-1195741:-1:exon
so has part: feature:1195488-1195541:-1:exon
so has part: feature:1194195-1194659:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1205585-1205716:-1:exon

position:1205585:-1
position: 1205585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1205199-1205281:-1:exon

position:1205199:-1
position: 1205199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1205281:-1
position: 1205281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1205017-1205098:-1:exon

position:1205017:-1
position: 1205017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1205098:-1
position: 1205098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1204809-1204884:-1:exon

position:1204809:-1
position: 1204809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1204884:-1
position: 1204884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1204619-1204704:-1:exon

position:1204619:-1
position: 1204619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1204704:-1
position: 1204704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1204444-1204520:-1:exon

position:1204444:-1
position: 1204444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1204520:-1
position: 1204520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1202295-1202351:-1:exon

position:1202295:-1
position: 1202295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1202351:-1
position: 1202351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1202068-1202180:-1:exon

position:1202068:-1
position: 1202068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1202180:-1
position: 1202180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1201339-1201433:-1:exon

position:1201339:-1
position: 1201339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1201433:-1
position: 1201433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1201167-1201253:-1:exon

position:1201167:-1
position: 1201167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1201253:-1
position: 1201253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1199657-1199737:-1:exon

position:1199657:-1
position: 1199657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1199737:-1
position: 1199737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1198703-1198870:-1:exon

position:1198703:-1
position: 1198703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1198870:-1
position: 1198870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1198468-1198623:-1:exon

position:1198468:-1
position: 1198468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1198623:-1
position: 1198623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1197385-1197466:-1:exon

position:1197385:-1
position: 1197385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1197466:-1
position: 1197466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1196988-1197103:-1:exon

position:1196988:-1
position: 1196988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1197103:-1
position: 1197103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1196103-1196183:-1:exon

position:1196103:-1
position: 1196103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1196183:-1
position: 1196183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1195897-1196034:-1:exon

position:1195897:-1
position: 1195897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1196034:-1
position: 1196034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1195652-1195741:-1:exon

position:1195652:-1
position: 1195652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1195741:-1
position: 1195741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1195488-1195541:-1:exon

position:1195488:-1
position: 1195488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1195541:-1
position: 1195541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1194195-1194659:-1:exon

position:1194659:-1
position: 1194659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111779950
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111779950
product: transcription factor IIIB 90 kDa subunit-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_023660169.1
SIO_010081: LOC111779950
subclass of: SO_0000673
so part of: LOC111779950
location: complement(join(1194195..1194659,1195488..1195541,1195652..1195741,1195897..1196034,1196103..1196183,1196988..1197103,1197385..1197466,1198468..1198623,1198703..1198870,1199657..1199737,1201167..1201253,1201339..1201433,1202068..1202180,1202295..1202351,1204444..1204520,1204619..1204704,1204809..1204884,1205017..1205098,1205199..1205298,1205585..1205716))
location: region:1194195-1205716:-1
so has part: feature:1205585-1205716:-1:exon
so has part: feature:1205199-1205298:-1:exon
so has part: feature:1205017-1205098:-1:exon
so has part: feature:1204809-1204884:-1:exon
so has part: feature:1204619-1204704:-1:exon
so has part: feature:1204444-1204520:-1:exon
so has part: feature:1202295-1202351:-1:exon
so has part: feature:1202068-1202180:-1:exon
so has part: feature:1201339-1201433:-1:exon
so has part: feature:1201167-1201253:-1:exon
so has part: feature:1199657-1199737:-1:exon
so has part: feature:1198703-1198870:-1:exon
so has part: feature:1198468-1198623:-1:exon
so has part: feature:1197385-1197466:-1:exon
so has part: feature:1196988-1197103:-1:exon
so has part: feature:1196103-1196183:-1:exon
so has part: feature:1195897-1196034:-1:exon
so has part: feature:1195652-1195741:-1:exon
so has part: feature:1195488-1195541:-1:exon
so has part: feature:1194195-1194659:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1205585-1205716:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1205199-1205298:-1:exon

position:1205298:-1
position: 1205298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1205017-1205098:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1204809-1204884:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1204619-1204704:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1204444-1204520:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1202295-1202351:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1202068-1202180:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1201339-1201433:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1201167-1201253:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1199657-1199737:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1198703-1198870:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1198468-1198623:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1197385-1197466:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1196988-1197103:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1196103-1196183:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1195897-1196034:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1195652-1195741:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1195488-1195541:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1194195-1194659:-1:exon

LOC111779950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111779950
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor IIIB 90 kDa subunit-like
translation: MVWCSNCVKNVAGSRDNAGFQYCDMCGKVLDFYNFSQDPTFTKDSGGQSQLSGNFVRSIQSNYSASRERTLSRAFDDMRYMRNGLNMGESDEIIRVAGAFYRIALERNFTRGRNTEFVQAACLYIACREKNKPYLLIDFSNYLRINVYVLGAVFLQLCKVLRLEEHPIVQKPVDPSLFIDKFTQCLLGGTKDDGMKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYVSALSHGVKCSKSDIIKIVHICDATLTKRLIEFENTESGSLTLEEFIVMADKAKASNSERTDGSKNGLNSSSDEVLCVHKNDTTKPYALGLCRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMAEEGSNDSSAIGKFSQGLNPCNNIEKELDNLHAADASKTVSSKEEAEAAKGAADEQTELDDGVNKLGDDGLRTCASDESESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAVKEAAAAAAKKAYEANFENCSEDMKAAKDLADAAAAAVAKSRKERQRKRAADAKNVSPAQTAAEATRQMLNKKRLSSKINYDVLDKLFDESAGTELSAKKKRTEEAGETDKTKDETKEFESTELKHGEQEQENDYDGDGTYGSGLYYENMEEPYSYEHDYGYDEYD
SIO_010081: LOC111779950
subclass of: SO_0000673
so part of: LOC111779950
location: complement(join(1194432..1194659,1195488..1195541,1195652..1195741,1195897..1196034,1196103..1196183,1196988..1197103,1197385..1197466,1198468..1198623,1198703..1198870,1199657..1199737,1201167..1201253,1201339..1201433,1202068..1202180,1202295..1202351,1204444..1204520,1204619..1204704,1204809..1204884,1205017..1205098,1205199..1205260))
location: region:1194432-1205260:-1
so has part: feature:1205199-1205260:-1:exon
so has part: feature:1205017-1205098:-1:exon
so has part: feature:1204809-1204884:-1:exon
so has part: feature:1204619-1204704:-1:exon
so has part: feature:1204444-1204520:-1:exon
so has part: feature:1202295-1202351:-1:exon
so has part: feature:1202068-1202180:-1:exon
so has part: feature:1201339-1201433:-1:exon
so has part: feature:1201167-1201253:-1:exon
so has part: feature:1199657-1199737:-1:exon
so has part: feature:1198703-1198870:-1:exon
so has part: feature:1198468-1198623:-1:exon
so has part: feature:1197385-1197466:-1:exon
so has part: feature:1196988-1197103:-1:exon
so has part: feature:1196103-1196183:-1:exon
so has part: feature:1195897-1196034:-1:exon
so has part: feature:1195652-1195741:-1:exon
so has part: feature:1195488-1195541:-1:exon
so has part: feature:1194432-1194659:-1:exon

XP_023515936.1
type: Protein
SIO_000068: ncbiprotein

position:1194432:-1
position: 1194432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1205260:-1
position: 1205260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1205199-1205260:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1205017-1205098:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1204809-1204884:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1204619-1204704:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1204444-1204520:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1202295-1202351:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1202068-1202180:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1201339-1201433:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1201167-1201253:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1199657-1199737:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1198703-1198870:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1198468-1198623:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1197385-1197466:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1196988-1197103:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1196103-1196183:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1195897-1196034:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1195652-1195741:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1195488-1195541:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1194432-1194659:-1:exon

LOC111779950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111779950
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor IIIB 90 kDa subunit-like
translation: MVWCSNCVKNVAGSRDNAGFQYCDMCGKVLDFYNFSQDPTFTKDSGGQSQLSGNFVRSIQSNYSASRERTLSRAFDDMRYMRNGLNMGESDEIIRVAGAFYRIALERNFTRGRNTEFVQAACLYIACREKNKPYLLIDFSNYLRINVYVLGAVFLQLCKVLRLEEHPIVQKPVDPSLFIDKFTQCLLGGTKDDGMKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYVSALSHGVKCSKSDIIKIVHICDATLTKRLIEFENTESGSLTLEEFIVMADKAKASNSERTDGSKNGLNSSSDEVLCVHKNDTTKPYALGLCRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMAEEGSNDSSAIGKFSQGLNPCNNIEKELDNLHAADASKTVSSKEEAEAAKGAADEQTELDDGVNKLGDDGLRTCASDESESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAVKEAAAAAAKKAYEANFENCSEDMKAAKDLADAAAAAVAKSRKERQRKRAADAKNVSPAQTAAEATRQMLNKKRLSSKINYDVLDKLFDESAGTELSAKKKRTEEAGETDKTKDETKEFESTELKHGEQEQENDYDGDGTYGSGLYYENMEEPYSYEHDYGYDEYD
SIO_010081: LOC111779950
subclass of: SO_0000673
so part of: LOC111779950
location: complement(join(1194432..1194659,1195488..1195541,1195652..1195741,1195897..1196034,1196103..1196183,1196988..1197103,1197385..1197466,1198468..1198623,1198703..1198870,1199657..1199737,1201167..1201253,1201339..1201433,1202068..1202180,1202295..1202351,1204444..1204520,1204619..1204704,1204809..1204884,1205017..1205098,1205199..1205260))
location: region:1194432-1205260:-1
so has part: feature:1205199-1205260:-1:exon
so has part: feature:1205017-1205098:-1:exon
so has part: feature:1204809-1204884:-1:exon
so has part: feature:1204619-1204704:-1:exon
so has part: feature:1204444-1204520:-1:exon
so has part: feature:1202295-1202351:-1:exon
so has part: feature:1202068-1202180:-1:exon
so has part: feature:1201339-1201433:-1:exon
so has part: feature:1201167-1201253:-1:exon
so has part: feature:1199657-1199737:-1:exon
so has part: feature:1198703-1198870:-1:exon
so has part: feature:1198468-1198623:-1:exon
so has part: feature:1197385-1197466:-1:exon
so has part: feature:1196988-1197103:-1:exon
so has part: feature:1196103-1196183:-1:exon
so has part: feature:1195897-1196034:-1:exon
so has part: feature:1195652-1195741:-1:exon
so has part: feature:1195488-1195541:-1:exon
so has part: feature:1194432-1194659:-1:exon

XP_023515937.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1205199-1205260:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1205017-1205098:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1204809-1204884:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1204619-1204704:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1204444-1204520:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1202295-1202351:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1202068-1202180:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1201339-1201433:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1201167-1201253:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1199657-1199737:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1198703-1198870:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1198468-1198623:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1197385-1197466:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1196988-1197103:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1196103-1196183:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1195897-1196034:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1195652-1195741:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1195488-1195541:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1194432-1194659:-1:exon

LOC111779957
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111779957
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1213183..1215515)
location: region:1213183-1215515:-1
so has part: feature:1213183-1215515:-1:exon
subclass of: SO_0000010

111779957
type: Gene
SIO_000068: ncbigene

position:1213183:-1
position: 1213183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1215515:-1
position: 1215515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1213183-1215515:-1:exon

LOC111779957
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111779957
product: gibberellin receptor GID1C-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_023660179.1
SIO_010081: LOC111779957
subclass of: SO_0000673
so part of: LOC111779957
location: complement(join(1213183..1214870,1215288..1215515))
location: region:1213183-1215515:-1
so has part: feature:1215288-1215515:-1:exon
so has part: feature:1213183-1214870:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1215288-1215515:-1:exon

position:1215288:-1
position: 1215288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1213183-1214870:-1:exon

position:1214870:-1
position: 1214870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111779957
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111779957
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gibberellin receptor GID1C-like
translation: MMAGTNQINLNEARMVVPLNTWVLISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPVDGAFSFDVIIDRATSLLCRIYRPAKGGEPQTTSIVDLEKPVDSEVVVPVIVFFHGGSFAHSSANSAIYDTLCRRLVSLCKAVVISVNYRRAPENRYPCAYDDGWTALNWVNSRTWLRSKDSKSYIYLAGDSSGGNIVHHVASRAVKSGIKVFGNILLNPMFGGQERTKSEIRLDGKYFVTIRDRDWYWRAFLPEGEDRDHPACNPFGPRGYSLEGIKFPKSLVVVAGLDLVQDWQLAYARGLENDGQEVKLLYLEQATIGFYLLPNTEHFYTVMDEISEFVSSDC
SIO_010081: LOC111779957
subclass of: SO_0000673
so part of: LOC111779957
location: complement(join(1213872..1214870,1215288..1215329))
location: region:1213872-1215329:-1
so has part: feature:1215288-1215329:-1:exon
so has part: feature:1213872-1214870:-1:exon

XP_023515947.1
type: Protein
SIO_000068: ncbiprotein

position:1213872:-1
position: 1213872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1215329:-1
position: 1215329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1215288-1215329:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1213872-1214870:-1:exon

TRNAR-ACG
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAR-ACG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1238706..1238778)
location: region:1238706-1238778:-1
so has part: feature:1238706-1238778:-1:exon
subclass of: SO_0000663

111780814
type: Gene
SIO_000068: ncbigene

position:1238706:-1
position: 1238706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1238778:-1
position: 1238778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1238706-1238778:-1:exon

TRNAR-ACG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAR-ACG
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA arginine (anticodon ACG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1238743..1238745),aa:Arg, seq:acg)
SIO_010081: TRNAR-ACG
subclass of: SO_0000673
so part of: TRNAR-ACG
location: complement(1238706..1238778)
location: region:1238706-1238778:-1
so has part: feature:1238706-1238778:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1238706-1238778:-1:exon

TRNAR-ACG
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAR-ACG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1239194..1239266)
location: region:1239194-1239266:-1
so has part: feature:1239194-1239266:-1:exon
subclass of: SO_0000663

111780815
type: Gene
SIO_000068: ncbigene

position:1239194:-1
position: 1239194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1239266:-1
position: 1239266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1239194-1239266:-1:exon

TRNAR-ACG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAR-ACG
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA arginine (anticodon ACG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1239231..1239233),aa:Arg, seq:acg)
SIO_010081: TRNAR-ACG
subclass of: SO_0000673
so part of: TRNAR-ACG
location: complement(1239194..1239266)
location: region:1239194-1239266:-1
so has part: feature:1239194-1239266:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1239194-1239266:-1:exon

TRNAR-ACG
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAR-ACG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1239963..1240035)
location: region:1239963-1240035:-1
so has part: feature:1239963-1240035:-1:exon
subclass of: SO_0000663

111780816
type: Gene
SIO_000068: ncbigene

position:1239963:-1
position: 1239963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1240035:-1
position: 1240035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1239963-1240035:-1:exon

TRNAR-ACG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAR-ACG
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA arginine (anticodon ACG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1240000..1240002),aa:Arg, seq:acg)
SIO_010081: TRNAR-ACG
subclass of: SO_0000673
so part of: TRNAR-ACG
location: complement(1239963..1240035)
location: region:1239963-1240035:-1
so has part: feature:1239963-1240035:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1239963-1240035:-1:exon

TRNAR-ACG
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAR-ACG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1240129..1240201)
location: region:1240129-1240201:-1
so has part: feature:1240129-1240201:-1:exon
subclass of: SO_0000663

111780817
type: Gene
SIO_000068: ncbigene

position:1240129:-1
position: 1240129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1240201:-1
position: 1240201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1240129-1240201:-1:exon

TRNAR-ACG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAR-ACG
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA arginine (anticodon ACG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1240166..1240168),aa:Arg, seq:acg)
SIO_010081: TRNAR-ACG
subclass of: SO_0000673
so part of: TRNAR-ACG
location: complement(1240129..1240201)
location: region:1240129-1240201:-1
so has part: feature:1240129-1240201:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1240129-1240201:-1:exon

TRNAR-ACG
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAR-ACG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1240373..1240445)
location: region:1240373-1240445:-1
so has part: feature:1240373-1240445:-1:exon
subclass of: SO_0000663

111780819
type: Gene
SIO_000068: ncbigene

position:1240373:-1
position: 1240373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1240445:-1
position: 1240445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1240373-1240445:-1:exon

TRNAR-ACG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAR-ACG
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA arginine (anticodon ACG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1240410..1240412),aa:Arg, seq:acg)
SIO_010081: TRNAR-ACG
subclass of: SO_0000673
so part of: TRNAR-ACG
location: complement(1240373..1240445)
location: region:1240373-1240445:-1
so has part: feature:1240373-1240445:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1240373-1240445:-1:exon

TRNAL-AAG
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAL-AAG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1241272..1241344)
location: region:1241272-1241344:-1
so has part: feature:1241272-1241344:-1:exon
subclass of: SO_0000663

111780820
type: Gene
SIO_000068: ncbigene

position:1241272:-1
position: 1241272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1241344:-1
position: 1241344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1241272-1241344:-1:exon

TRNAL-AAG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAL-AAG
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA leucine (anticodon AAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1241309..1241311),aa:Leu, seq:aag)
SIO_010081: TRNAL-AAG
subclass of: SO_0000673
so part of: TRNAL-AAG
location: complement(1241272..1241344)
location: region:1241272-1241344:-1
so has part: feature:1241272-1241344:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1241272-1241344:-1:exon

TRNAR-ACG
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAR-ACG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1241610..1241682)
location: region:1241610-1241682:-1
so has part: feature:1241610-1241682:-1:exon
subclass of: SO_0000663

111780822
type: Gene
SIO_000068: ncbigene

position:1241610:-1
position: 1241610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1241682:-1
position: 1241682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1241610-1241682:-1:exon

TRNAR-ACG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAR-ACG
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA arginine (anticodon ACG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1241647..1241649),aa:Arg, seq:acg)
SIO_010081: TRNAR-ACG
subclass of: SO_0000673
so part of: TRNAR-ACG
location: complement(1241610..1241682)
location: region:1241610-1241682:-1
so has part: feature:1241610-1241682:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1241610-1241682:-1:exon

TRNAR-ACG
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAR-ACG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1241744..1241816)
location: region:1241744-1241816:-1
so has part: feature:1241744-1241816:-1:exon
subclass of: SO_0000663

111780823
type: Gene
SIO_000068: ncbigene

position:1241744:-1
position: 1241744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1241816:-1
position: 1241816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1241744-1241816:-1:exon

TRNAR-ACG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAR-ACG
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA arginine (anticodon ACG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1241781..1241783),aa:Arg, seq:acg)
SIO_010081: TRNAR-ACG
subclass of: SO_0000673
so part of: TRNAR-ACG
location: complement(1241744..1241816)
location: region:1241744-1241816:-1
so has part: feature:1241744-1241816:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1241744-1241816:-1:exon

TRNAR-ACG
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAR-ACG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1242096..1242168)
location: region:1242096-1242168:-1
so has part: feature:1242096-1242168:-1:exon
subclass of: SO_0000663

111780825
type: Gene
SIO_000068: ncbigene

position:1242096:-1
position: 1242096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1242168:-1
position: 1242168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1242096-1242168:-1:exon

TRNAR-ACG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAR-ACG
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA arginine (anticodon ACG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1242133..1242135),aa:Arg, seq:acg)
SIO_010081: TRNAR-ACG
subclass of: SO_0000673
so part of: TRNAR-ACG
location: complement(1242096..1242168)
location: region:1242096-1242168:-1
so has part: feature:1242096-1242168:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1242096-1242168:-1:exon

TRNAR-ACG
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAR-ACG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1242230..1242302)
location: region:1242230-1242302:-1
so has part: feature:1242230-1242302:-1:exon
subclass of: SO_0000663

111780826
type: Gene
SIO_000068: ncbigene

position:1242230:-1
position: 1242230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1242302:-1
position: 1242302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1242230-1242302:-1:exon

TRNAR-ACG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAR-ACG
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA arginine (anticodon ACG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1242267..1242269),aa:Arg, seq:acg)
SIO_010081: TRNAR-ACG
subclass of: SO_0000673
so part of: TRNAR-ACG
location: complement(1242230..1242302)
location: region:1242230-1242302:-1
so has part: feature:1242230-1242302:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1242230-1242302:-1:exon

TRNAR-ACG
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAR-ACG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1242364..1242436)
location: region:1242364-1242436:-1
so has part: feature:1242364-1242436:-1:exon
subclass of: SO_0000663

111780827
type: Gene
SIO_000068: ncbigene

position:1242364:-1
position: 1242364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1242436:-1
position: 1242436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1242364-1242436:-1:exon

TRNAR-ACG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAR-ACG
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA arginine (anticodon ACG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1242401..1242403),aa:Arg, seq:acg)
SIO_010081: TRNAR-ACG
subclass of: SO_0000673
so part of: TRNAR-ACG
location: complement(1242364..1242436)
location: region:1242364-1242436:-1
so has part: feature:1242364-1242436:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1242364-1242436:-1:exon

TRNAR-ACG
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAR-ACG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1242587..1242659)
location: region:1242587-1242659:-1
so has part: feature:1242587-1242659:-1:exon
subclass of: SO_0000663

111780828
type: Gene
SIO_000068: ncbigene

position:1242587:-1
position: 1242587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1242659:-1
position: 1242659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1242587-1242659:-1:exon

TRNAR-ACG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAR-ACG
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA arginine (anticodon ACG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1242624..1242626),aa:Arg, seq:acg)
SIO_010081: TRNAR-ACG
subclass of: SO_0000673
so part of: TRNAR-ACG
location: complement(1242587..1242659)
location: region:1242587-1242659:-1
so has part: feature:1242587-1242659:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1242587-1242659:-1:exon

TRNAR-ACG
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: TRNAR-ACG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1242911..1242983)
location: region:1242911-1242983:-1
so has part: feature:1242911-1242983:-1:exon
subclass of: SO_0000663

111780829
type: Gene
SIO_000068: ncbigene

position:1242911:-1
position: 1242911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1242983:-1
position: 1242983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1242911-1242983:-1:exon

TRNAR-ACG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 3664
gene: TRNAR-ACG
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA arginine (anticodon ACG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1242948..1242950),aa:Arg, seq:acg)
SIO_010081: TRNAR-ACG
subclass of: SO_0000673
so part of: TRNAR-ACG
location: complement(1242911..1242983)
location: region:1242911-1242983:-1
so has part: feature:1242911-1242983:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1242911-1242983:-1:exon

LOC111779969
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111779969
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1253180..1253968
location: region:1253180-1253968:1
so has part: feature:1253180-1253968:1:exon
subclass of: SO_0000010

111779969
type: Gene
SIO_000068: ncbigene

position:1253180:1
position: 1253180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1253968:1
position: 1253968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1253180-1253968:1:exon

LOC111779969
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111779969
product: probable histone H2AXb
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_023660192.1
SIO_010081: LOC111779969
subclass of: SO_0000673
so part of: LOC111779969
location: join(1253180..1253485,1253579..1253968)
location: region:1253180-1253968:1
so has part: feature:1253180-1253485:1:exon
so has part: feature:1253579-1253968:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1253180-1253485:1:exon

position:1253485:1
position: 1253485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1253579-1253968:1:exon

position:1253579:1
position: 1253579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111779969
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111779969
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable histone H2AXb
translation: MSSTKGGRGKPQATKSVTRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKDKGDIGSASQEF
SIO_010081: LOC111779969
subclass of: SO_0000673
so part of: LOC111779969
location: join(1253297..1253485,1253579..1253800)
location: region:1253297-1253800:1
so has part: feature:1253297-1253485:1:exon
so has part: feature:1253579-1253800:1:exon

XP_023515960.1
type: Protein
SIO_000068: ncbiprotein

position:1253297:1
position: 1253297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1253800:1
position: 1253800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1253297-1253485:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1253579-1253800:1:exon

LOC111780473
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780473
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1256807..1257964
location: region:1256807-1257964:1
so has part: feature:1256807-1257964:1:exon
subclass of: SO_0000010

111780473
type: Gene
SIO_000068: ncbigene

position:1256807:1
position: 1256807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1257964:1
position: 1257964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1256807-1257964:1:exon

LOC111780473
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111780473
product: F-box protein At3g07870-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_023660892.1
SIO_010081: LOC111780473
subclass of: SO_0000673
so part of: LOC111780473
location: 1256807..1257964
location: region:1256807-1257964:1
so has part: feature:1256807-1257964:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1256807-1257964:1:exon

LOC111780473
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111780473
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box protein At3g07870-like
translation: MANDQDIISNKISELIPDVVELILSKLPYYYLPSCRLVCKTWNDVILSSKHDPSISPASNFLLAHVYSNRRDRLSFRNLHCLELDSDHVEEVRSVASFNLRRKYFRRSFISTINSCNGLLAFVVTKNTKSWLNSNTVVILNPMTNEYFELPKDEFKGNWLTCSYGFGFCPKTKHYKVVRNSTVEDRNSTVNYKSEIFAFGTRQEWTRIESPSYSFNGCHGVYLNGGLHWVGQDDLHHDVIYRLNMEDEKYEHIPFPNDDGYFPCIGVFNGALHLTLSMEGHEYTMWKMKEDGSWIKAFSTSVPDVSKNILSFSQSTVEQVKICKDGKILCVWAGAELVLYDPKTEKMEKLMDDTIAREFWIHNINCFNFNALSDILTGKIGKILF
SIO_010081: LOC111780473
subclass of: SO_0000673
so part of: LOC111780473
location: 1256807..1257964
location: region:1256807-1257964:1
so has part: feature:1256807-1257964:1:exon

XP_023516660.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1256807-1257964:1:exon

LOC111780474
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780474
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1290959..1296840
location: region:1290959-1296840:1
so has part: feature:1290959-1296840:1:exon
subclass of: SO_0000010

111780474
type: Gene
SIO_000068: ncbigene

position:1290959:1
position: 1290959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1296840:1
position: 1296840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1290959-1296840:1:exon

LOC111780474
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111780474
product: uncharacterized LOC111780474
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_023660893.1
SIO_010081: LOC111780474
subclass of: SO_0000673
so part of: LOC111780474
location: join(1290959..1291115,1291197..1291277,1296413..1296840)
location: region:1290959-1296840:1
so has part: feature:1290959-1291115:1:exon
so has part: feature:1291197-1291277:1:exon
so has part: feature:1296413-1296840:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1290959-1291115:1:exon

position:1291115:1
position: 1291115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1291197-1291277:1:exon

position:1291197:1
position: 1291197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1291277:1
position: 1291277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1296413-1296840:1:exon

position:1296413:1
position: 1296413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111780474
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111780474
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111780474
translation: MDHRRNPSLXAEPTGPGRASDPRLRGSGRACSLQLVPSRAHGHALPAYXISRGITHARSVKKFGRDLNPKAEIRGSSVNGHVARTCPTRSLGNPREPLRGPVIREPTIQTRPQTRAYATTSKDAGTSGTVVTGTLYILGHFALTLFDSGSAHSFVSLPFVKEAGFVVEPLMHVLSVGTLAGVDLVTKNRLKDGQVVIAGQTIHVDFKVVDMTDFEVILGMD
SIO_010081: LOC111780474
subclass of: SO_0000673
so part of: LOC111780474
location: join(1290959..1291115,1291197..1291277,1296413..1296840)
location: region:1290959-1296840:1
so has part: feature:1290959-1291115:1:exon
so has part: feature:1291197-1291277:1:exon
so has part: feature:1296413-1296840:1:exon

XP_023516661.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1290959-1291115:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1291197-1291277:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1296413-1296840:1:exon

LOC111780475
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780475
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1305545..1306315
location: region:1305545-1306315:1
so has part: feature:1305545-1306315:1:exon
subclass of: SO_0000010

111780475
type: Gene
SIO_000068: ncbigene

position:1305545:1
position: 1305545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1306315:1
position: 1306315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1305545-1306315:1:exon

LOC111780475
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111780475
product: disease resistance protein TAO1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_023660896.1
SIO_010081: LOC111780475
subclass of: SO_0000673
so part of: LOC111780475
location: 1305545..1306315
location: region:1305545-1306315:1
so has part: feature:1305545-1306315:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1305545-1306315:1:exon

LOC111780475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111780475
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disease resistance protein TAO1-like
translation: MLGQLSKLEVLHIYNLRGVKSIGDEFYGNYRDNKTLFPKLKTFEILSMENLEQWKDVAIVMNCTIFPHLESLTICFCDKLTNIPNIFATHSQRMEADTVNARLFSSFQSPPKLRSLSIYDCTSLVKLPTWLECCSSLEDLSIGNFRDDISPPNLQNMQNLSSLDIKNFHSFPEGFDGIHNLKTLKVKGPMEGYDWSRFIPFNSLEILELHETGTDSLTQLPRQLELLTSLRSLHIESFKGIESLPEWLGNITSLEH
SIO_010081: LOC111780475
subclass of: SO_0000673
so part of: LOC111780475
location: 1305545..1306315
location: region:1305545-1306315:1
so has part: feature:1305545-1306315:1:exon

XP_023516664.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1305545-1306315:1:exon

LOC111779949
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111779949
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1311140..1314032)
location: region:1311140-1314032:-1
so has part: feature:1311140-1314032:-1:exon
subclass of: SO_0000010

111779949
type: Gene
SIO_000068: ncbigene

position:1311140:-1
position: 1311140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1314032:-1
position: 1314032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1311140-1314032:-1:exon

LOC111779949
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111779949
product: putative disease resistance protein RGA3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023660167.1
SIO_010081: LOC111779949
subclass of: SO_0000673
so part of: LOC111779949
location: complement(1311140..1314032)
location: region:1311140-1314032:-1
so has part: feature:1311140-1314032:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1311140-1314032:-1:exon

LOC111779949
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111779949
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative disease resistance protein RGA3
translation: MAEFLWTFAIQEVLKKTVKLAAEQIGLASGFEEELSKLKDSLLRVQAILRDVDRMKADLESQKLWVKKLEDIAFEADILLDELAYEDVRRKVEIEKVKVVRNFFSFSKNPFAFRLKMANKITTVTRKLDESISTKSPPPCVATTSNEAEIDLNQTRETDSFPDEIGVIGREIEVSNIVDNLLALKNEETLVVLPIVGTGGLGKTTLVKKIFHHELIRKNFDTFIWVCVSDPFKINKILRAIVGYMKPTFGGSDEKEIILRELQNLLSNKKYFLVLDDVWNEEPILWNELRACLLKINKNMGSAIVVTTRSDKVAEIMETKYRHHLRELLDDHCWSLFEKCAFESKLPVISDVIRGQLVKKFGGIPLIVKVLGGMVKSCKNDEELQSTLENLVRIELAKEDLILFTIKLSVDRLPSSSLKQCFAYCSNFPPDFVFNKEKLVQMWVAHGFIQIPNGSNVTMEDIGARYFDILLSRSLFQDVVKDERGKVEFCKMHDLIHEVACAISNDQHLREDLITDGKSHGDEVLLIRQRRRTFYCCENVQFGNQVEINNFIYLRVLIINGEFVTELPDTIGKLKHLRYLDISYTRISKLPKSIILLYHLQTLKLPELNFPTKLRKLVNLRHLEMKVFCSPTQMPKNLSRMTQLQTLSVFVVGSDEGYKIEELGPLKNLKGKLRLLKLEQVKNKKEAMAANLVEKENISNLSFEWSFMEEDCGDNDLNVLEGLQPHINLQALRMLNFGSELMPNGIFVENLIKLELHSCTRCKTLPMLGQLSKLEVLQIIGLSGVKSIRDEFYGNYRDSKTLFPKLKTFEISVLINLEQWKDVATVMNCTIFPHLESLTIRLCDKLTNISNIFAPHSQRMEADTVNERLFSSFQSLPKLRSLRILR
SIO_010081: LOC111779949
subclass of: SO_0000673
so part of: LOC111779949
location: complement(1311251..1313911)
location: region:1311251-1313911:-1
so has part: feature:1311251-1313911:-1:exon

XP_023515935.1
type: Protein
SIO_000068: ncbiprotein

position:1311251:-1
position: 1311251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1313911:-1
position: 1313911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1311251-1313911:-1:exon

LOC111780476
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111780476
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1351098..>1351821)
location: region:1351098-1351821:-1
so has part: feature:1351098-1351821:-1:exon
subclass of: SO_0000010

111780476
type: Gene
SIO_000068: ncbigene

position:1351098:-1
position: 1351098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1351821:-1
position: 1351821
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1351098-1351821:-1:exon

LOC111780476
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111780476
product: uncharacterized LOC111780476
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023660897.1
SIO_010081: LOC111780476
subclass of: SO_0000673
so part of: LOC111780476
location: complement(1351098..>1351821)
location: region:1351098-1351821:-1
so has part: feature:1351098-1351821:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1351098-1351821:-1:exon

LOC111780476
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111780476
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111780476
translation: TVKCDLHTESGVAELISAMAAGRNAQFIVETWSSGGAIATSIGLAVARRHTGGRHVCVVPDERSRGEYWRAMERAGLAPEVIVREPEEVMGGLVGIDFLVVNSERRNFSRVLKMANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLDIAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK
SIO_010081: LOC111780476
subclass of: SO_0000673
so part of: LOC111780476
location: complement(1351222..>1351821)
location: region:1351222-1351821:-1
so has part: feature:1351222-1351821:-1:exon

XP_023516665.1
type: Protein
SIO_000068: ncbiprotein

position:1351222:-1
position: 1351222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1351222-1351821:-1:exon

LOC111779959
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111779959
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1360312..1364204)
location: region:1360312-1364204:-1
so has part: feature:1360312-1364204:-1:exon
subclass of: SO_0000010

111779959
type: Gene
SIO_000068: ncbigene

position:1360312:-1
position: 1360312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1364204:-1
position: 1364204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1360312-1364204:-1:exon

LOC111779959
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111779959
product: uncharacterized LOC111779959, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_023660182.1
SIO_010081: LOC111779959
subclass of: SO_0000673
so part of: LOC111779959
location: complement(join(1360312..1360640,1360722..1360817,1362044..1362088,1363335..1363475,1363572..1363658,1363741..1363827,1363902..1364204))
location: region:1360312-1364204:-1
so has part: feature:1363902-1364204:-1:exon
so has part: feature:1363741-1363827:-1:exon
so has part: feature:1363572-1363658:-1:exon
so has part: feature:1363335-1363475:-1:exon
so has part: feature:1362044-1362088:-1:exon
so has part: feature:1360722-1360817:-1:exon
so has part: feature:1360312-1360640:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1363902-1364204:-1:exon

position:1363902:-1
position: 1363902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1363741-1363827:-1:exon

position:1363741:-1
position: 1363741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1363827:-1
position: 1363827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1363572-1363658:-1:exon

position:1363572:-1
position: 1363572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1363658:-1
position: 1363658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1363335-1363475:-1:exon

position:1363335:-1
position: 1363335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1363475:-1
position: 1363475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1362044-1362088:-1:exon

position:1362044:-1
position: 1362044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1362088:-1
position: 1362088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1360722-1360817:-1:exon

position:1360722:-1
position: 1360722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1360817:-1
position: 1360817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1360312-1360640:-1:exon

position:1360640:-1
position: 1360640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111779959
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 3664
gene: LOC111779959
product: uncharacterized LOC111779959, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_023660181.1
SIO_010081: LOC111779959
subclass of: SO_0000673
so part of: LOC111779959
location: complement(join(1360312..1360640,1360722..1360817,1362044..1362088,1362203..1362259,1363335..1363475,1363572..1363658,1363741..1363827,1363902..1364204))
location: region:1360312-1364204:-1
so has part: feature:1363902-1364204:-1:exon
so has part: feature:1363741-1363827:-1:exon
so has part: feature:1363572-1363658:-1:exon
so has part: feature:1363335-1363475:-1:exon
so has part: feature:1362203-1362259:-1:exon
so has part: feature:1362044-1362088:-1:exon
so has part: feature:1360722-1360817:-1:exon
so has part: feature:1360312-1360640:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1363902-1364204:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1363741-1363827:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1363572-1363658:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1363335-1363475:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1362203-1362259:-1:exon

position:1362203:-1
position: 1362203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1362259:-1
position: 1362259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1362044-1362088:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1360722-1360817:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1360312-1360640:-1:exon

LOC111779959
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111779959
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111779959 isoform X2
translation: MFFTAADCDFTFNLEFHRRIPVTGDVISSAKRGDSGDGAAKRRRALKLVDRALSKRQYKSALSLVKQLQGKPYGLRAFGAAKQITKRPSAMDNLSLQPLVDSILDSIQPCLQISAEKLESLIAEGRYPSRCEEEEHLICAQHEAGHFLVGYLMGVLPKQYEVPSIQALRQNRFAEGNVSFVGFEFLGEENKGRQENKGTISSTKLKQFSCVILGGLAAELLVAGKSDGHLADILKLESVLIWLGLPNSDADRHLKWAAMNTAFIMSRHSETRSILAKVMALGKSIGFCIDTIENCLQGIEI
SIO_010081: LOC111779959
subclass of: SO_0000673
so part of: LOC111779959
location: complement(join(1360440..1360640,1360722..1360817,1362044..1362088,1363335..1363475,1363572..1363658,1363741..1363827,1363902..1364150))
location: region:1360440-1364150:-1
so has part: feature:1363902-1364150:-1:exon
so has part: feature:1363741-1363827:-1:exon
so has part: feature:1363572-1363658:-1:exon
so has part: feature:1363335-1363475:-1:exon
so has part: feature:1362044-1362088:-1:exon
so has part: feature:1360722-1360817:-1:exon
so has part: feature:1360440-1360640:-1:exon

XP_023515950.1
type: Protein
SIO_000068: ncbiprotein

position:1360440:-1
position: 1360440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1364150:-1
position: 1364150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1363902-1364150:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1363741-1363827:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1363572-1363658:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1363335-1363475:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1362044-1362088:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1360722-1360817:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1360440-1360640:-1:exon

LOC111779959
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 3664
gene: LOC111779959
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC111779959 isoform X1
translation: MFFTAADCDFTFNLEFHRRIPVTGDVISSAKRGDSGDGAAKRRRALKLVDRALSKRQYKSALSLVKQLQGKPYGLRAFGAAKQITKRPSAMDNLSLQPLVDSILDSIQPCLQISAEKLESLIAEGRYPSRCEEEEHLICAQHEAGHFLVGYLMGVLPKQYEVPSIQALRQNRFAEGNVSFVGFEFLGEIDSIKILVENADIKNLHKRENKGRQENKGTISSTKLKQFSCVILGGLAAELLVAGKSDGHLADILKLESVLIWLGLPNSDADRHLKWAAMNTAFIMSRHSETRSILAKVMALGKSIGFCIDTIENCLQGIEI
SIO_010081: LOC111779959
subclass of: SO_0000673
so part of: LOC111779959
location: complement(join(1360440..1360640,1360722..1360817,1362044..1362088,1362203..1362259,1363335..1363475,1363572..1363658,1363741..1363827,1363902..1364150))
location: region:1360440-1364150:-1
so has part: feature:1363902-1364150:-1:exon
so has part: feature:1363741-1363827:-1:exon
so has part: feature:1363572-1363658:-1:exon
so has part: feature:1363335-1363475:-1:exon
so has part: feature:1362203-1362259:-1:exon
so has part: feature:1362044-1362088:-1:exon
so has part: feature:1360722-1360817:-1:exon
so has part: feature:1360440-1360640:-1:exon

XP_023515949.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1363902-1364150:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1363741-1363827:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1363572-1363658:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1363335-1363475:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1362203-1362259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1362044-1362088:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1360722-1360817:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1360440-1360640:-1:exon

LOC111779951
type: Gene
subclass of: SO_0000704
RO_0002162: 3664
gene: LOC111779951
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1365199..1368498)
location: region:1365199-1368498:-1
so has part: feature:1365199-1368498:-1:exon
subclass of: SO_0000010

111779951
type: Gene
SIO_000068: ncbigene

position:1365199:-1
position: 1365199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1368498:-1
position: 1368498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1365199-1368498:-1:exon