Polaromonas naphthalenivorans CJ2 plasmid pPNAP04, complete sequence.
type: Entry
definition: Polaromonas naphthalenivorans CJ2 plasmid pPNAP04, complete sequence.
sequence version: NC_008760.1
sequence date: 2022-12-28
sequence: sequence
division: CON
label: NC_008760.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02598302
keyword: RefSeq
source: Polaromonas naphthalenivorans CJ2
organism: Polaromonas naphthalenivorans CJ2
taxonomy: Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP000533.1.\nURL -- http://www.jgi.doe.gov\nJGI Project ID: 4000361\nSource DNA and bacteria available from Eugene L. Madsen\n(elm3@cornell.edu)\nContacts: Eugene L. Madsen (elm3@cornell.edu)\n Paul Richardson (microbes@cuba.jgi-psf.org)\nQuality assurance done by JGI-Stanford\nAnnotation done by JGI-ORNL and JGI-PGF\nFinishing done by JGI-LANL\nFinished microbial genomes have been curated to close all gaps with\ngreater than 98% coverage of at least two independent clones. Each\nbase pair has a minimum q (quality) value of 30 and the total error\nrate is less than one per 50000.\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. It is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/28/2022 02:04:21\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,174\nCDSs (total) :: 5,114\nGenes (coding) :: 4,993\nCDSs (with protein) :: 4,993\nGenes (RNA) :: 60\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 51\nncRNAs :: 3\nPseudo Genes (total) :: 121\nCDSs (without protein) :: 121\nPseudo Genes (ambiguous residues) :: 0 of 121\nPseudo Genes (frameshifted) :: 42 of 121\nPseudo Genes (incomplete) :: 93 of 121\nPse…

sequence
subclass of: SO_0000155
sequence length: 143747
topology: circular
so has quality: SO_0000988
location: 1..143747
location: region:1-143747:1
RO_0002162: 365044

NC_008760
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02598302
type: BioSample
SIO_000068: biosample

1
title: Complete sequence of plasmid pPNAP04 of Polaromonas naphthalenivorans CJ2
author: Copeland, A.
author: Lucas, S.
author: Lapidus, A.
author: Barry, K.
author: Detter, J.C.
author: Glavina del Rio, T.
author: Hammon, N.
author: Israni, S.
author: Dalin, E.
author: Tice, H.
author: Pitluck, S.
author: Sims, D.R.
author: Brettin, T.
author: Bruce, D.
author: Han, C.
author: Tapia, R.
author: Brainard, J.
author: Schmutz, J.
author: Larimer, F.
author: Land, M.
author: Hauser, L.
author: Kyrpides, N.
author: Kim, E.
author: Madsen, E.L.
author: Richardson, P.
journal: Unpublished

2
title: Direct Submission
author: Copeland, A.
author: Lucas, S.
author: Lapidus, A.
author: Barry, K.
author: Detter, J.C.
author: Glavina del Rio, T.
author: Hammon, N.
author: Israni, S.
author: Dalin, E.
author: Tice, H.
author: Pitluck, S.
author: Sims, D.R.
author: Brettin, T.
author: Bruce, D.
author: Han, C.
author: Tapia, R.
author: Brainard, J.
author: Schmutz, J.
author: Larimer, F.
author: Land, M.
author: Hauser, L.
author: Kyrpides, N.
author: Kim, E.
author: Madsen, E.L.
author: Richardson, P.
journal: Submitted (21-DEC-2006) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143747:1
position: 143747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-143747:1:source
so part of: sequence
organism: Polaromonas naphthalenivorans CJ2
mol type: genomic DNA
strain: CJ2
type material: type strain of Polaromonas naphthalenivorans
plasmid: pPNAP04

365044
type: Taxonomy
SIO_000068: taxonomy

PNAP_RS23660
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23660
so part of: sequence
location: join(142754..143747,1..35)
location: region:1-143747:1
so has part: feature:142754-143747:1:exon
so has part: feature:1-35:1:exon
subclass of: SO_0000010

urn:…
SIO_000300: 1
SIO_000628: feature:142754-143747:1:exon

position:142754:1
position: 142754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-35:1:exon

position:35:1
position: 35
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PNAP_RS23660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23660
EC number: 3.5.99.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011484716.1
GO function: GO:0008660 - 1-aminocyclopropane-1-carboxylate deaminase activity [Evidence IEA]
GO process: GO:0042217 - 1-aminocyclopropane-1-carboxylate catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 1-aminocyclopropane-1-carboxylate deaminase
translation: MPLTLNLQKFPRHSLTFGPTPIQPLKRLSAHLSGKIELYAKREDCNSGLAFGGNKTRKLEYLIPEALAQGCDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIEMSRIMGADVRLDAAGFDIGIRPSWEQAMDDVRQAGGKPFAIPAGCSEHPYGGLGFVGFAEEVRAQEAELGFKFDYIVVCSVTGSTQAGMVVGFAADGRADRVIGIDASAKPEQTSAQILRIAQNTARLVELDRDITAKDVVLDTRYGGPEYGLPSEGTLEAIRLCARQEGMLTDPVYEGKSMHGMIDMVRRGEFPEGSRVLYAHLGGVPALNAYSFLFRNG
SIO_010081: PNAP_RS23660
subclass of: SO_0000673
so part of: PNAP_RS23660
location: join(142754..143747,1..35)
location: region:1-143747:1
so has part: feature:142754-143747:1:exon
so has part: feature:1-35:1:exon

WP_041377789.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:142754-143747:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-35:1:exon

PNAP_RS23665
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23665
old locus tag: Pnap_4611
so part of: sequence
location: 275..1255
location: region:275-1255:1
so has part: feature:275-1255:1:exon
subclass of: SO_0000010

position:275:1
position: 275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1255:1
position: 1255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275-1255:1:exon

PNAP_RS23665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23665
old locus tag: Pnap_4611
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011484715.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tripartite tricarboxylate transporter substrate binding protein
translation: MKLKIANLALLAAALAGLLPWSGACAQSYPSRPLQLVIPFPPGGATDIVGRLVGRKLGEHLGQPVVIENKAGAGTVVGAAFVAKAPADGYTLLISSGSTFTVNPALNPKLPYDPVKSFEPIGLAARVPLILIANRELPVNNLKQLIAAVRGTPDKYVYGSFGSGTTGHFAGELMWSALGIKLLHIPYKGSAPAMSDLIGGQIPFTVDTVAASLPQLKAGKIKAIAVTGATRATQLPNVPTVAESGFPGFSADSWLAVVAPRGLTADVKAKLQKALAETMADAEIRDKLIANGLQPAYEPAAAVAARIEDELPRMRAVAQRANIRAE
SIO_010081: PNAP_RS23665
subclass of: SO_0000673
so part of: PNAP_RS23665
location: 275..1255
location: region:275-1255:1
so has part: feature:275-1255:1:exon

WP_041377790.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:275-1255:1:exon

PNAP_RS27425
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS27425
old locus tag: Pnap_4612
so part of: sequence
location: 1258..1425
location: region:1258-1425:1
so has part: feature:1258-1425:1:exon
subclass of: SO_0000010

position:1258:1
position: 1258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1425:1
position: 1425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1258-1425:1:exon

PNAP_RS27425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS27425
old locus tag: Pnap_4612
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MATNDSLVALSAVELKRLIEARQISPVELPEACIARIVADACLQLAAASAGLCRV
SIO_010081: PNAP_RS27425
subclass of: SO_0000673
so part of: PNAP_RS27425
location: 1258..1425
location: region:1258-1425:1
so has part: feature:1258-1425:1:exon

WP_157040543.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1258-1425:1:exon

PNAP_RS23670
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23670
old locus tag: Pnap_4613
so part of: sequence
location: complement(1595..2566)
location: region:1595-2566:-1
so has part: feature:1595-2566:-1:exon
subclass of: SO_0000010

position:1595:-1
position: 1595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2566:-1
position: 2566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1595-2566:-1:exon

PNAP_RS23670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23670
old locus tag: Pnap_4613
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006579842.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MEIRFTPSLLAWLRCFEATVRYRSFTKAASELCVTQGAVSQQVKHLEDWLQRPLLLRTPRLLVPTPEGQWLAVVLRESFQAIEGTLIQLRRKQEDLTTALSCAPSFAMGWLTPRLGEFFRAHPDVNLRVIGEFHALDRERMARDDVVAAVRYDLGEYRDLQATAFLDEWLIPVASPVFLSAHPQLQTKADLRAPMLLHDTSPWVGAGPFEEWEHWLGHVGADVPQLAQGHHYNLSQLAIGAALAGQGIAMGRAALVFDDLAAGRLVAPFTQPVRSRASYFFLSGMDPSPHVMLVQGWLAAQAAVFRGRRDALLVGLAAALHAQ
SIO_010081: PNAP_RS23670
subclass of: SO_0000673
so part of: PNAP_RS23670
location: complement(1595..2566)
location: region:1595-2566:-1
so has part: feature:1595-2566:-1:exon

WP_011798406.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1595-2566:-1:exon

PNAP_RS23675
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23675
old locus tag: Pnap_4614
so part of: sequence
location: 2676..4043
location: region:2676-4043:1
so has part: feature:2676-4043:1:exon
subclass of: SO_0000010

position:2676:1
position: 2676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4043:1
position: 4043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2676-4043:1:exon

PNAP_RS23675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23675
old locus tag: Pnap_4614
EC number: 4.3.1.18
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798407.1
GO function: GO:0008721 - D-serine ammonia-lyase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO process: GO:0046416 - D-amino acid metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: D-serine ammonia-lyase
translation: MRSIQSPSSHAAEQESFFSLAALQVGLPLMWASPRPSPNLPDKEDSSIGSADVVRTGERLARFAPLLAQLFPELEAAGGIIESDLLAAPRLQEALNMPADTGTLLVKADHALPIAGSIKARGGIHEVLEHAETLALQHGLLASHEADYRVLAEPTARALFSRHQIAVGSTGNLGLAIGVMAAALGFQAVVHMSADAKEWKKERLRKRGVTVVEHAGDYAKAVAAGRAAAEADPRCHFVDDERSLSLLLGYAAAAPRLARQLVAQGRRVDAEHPLFVYLPCGVGGAPGGIALGLSQIYGEHVHCFFAEPTRSPCFLVQMLAGTPELAHLGAHPSVYDLGLDNRTEADGLAVPRASVLAAEVVRPFLAGVYTVNDEALFRHLHLAATTEGFRIEPSAAACLPGPAMLMGTAEGRAYLQREQLEHHMARSTHIAWTTGGLFVPDDEYARFRVRGALTS
SIO_010081: PNAP_RS23675
subclass of: SO_0000673
so part of: PNAP_RS23675
location: 2676..4043
location: region:2676-4043:1
so has part: feature:2676-4043:1:exon

WP_011798407.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2676-4043:1:exon

PNAP_RS23680
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23680
old locus tag: Pnap_4615
so part of: sequence
location: 4080..5042
location: region:4080-5042:1
so has part: feature:4080-5042:1:exon
subclass of: SO_0000010

position:4080:1
position: 4080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5042:1
position: 5042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4080-5042:1:exon

PNAP_RS23680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23680
old locus tag: Pnap_4615
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013543319.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tripartite tricarboxylate transporter substrate binding protein
translation: MKSRSLLSAAVLGIGVLTALASPAWADAAYPNHPVQLVIPFPPGGATDVVGRLIGKTLGEKLGQPVVADNRAGAGTIIGATYVSKAAPDGYTLLISSGTTFTVNPAIQPKLAYDPVKSFEPIGLILLAHKDVPVNNPKEFVAAAKAEPGKYSYASFGTGTTSQFTGELILHTTGTKLVHIPYKGSAPTMTDLMGGQVPFSVDTISAAIAQLKTGKIKAIAVTTAKRSALLPNVPTFAESGFNMDADTWIAIVAPRGLPPAVRARLEKALADTVAVPEVQAKLIGAGLEPGFQSGAAVSAMIEKELPLMRAIAQRANIKAE
SIO_010081: PNAP_RS23680
subclass of: SO_0000673
so part of: PNAP_RS23680
location: 4080..5042
location: region:4080-5042:1
so has part: feature:4080-5042:1:exon

WP_011798408.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4080-5042:1:exon

PNAP_RS23685
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23685
old locus tag: Pnap_4616
pseudo: true
so part of: sequence
location: 5039..6207
location: region:5039-6207:1
so has part: feature:5039-6207:1:exon
subclass of: SO_0000010

position:5039:1
position: 5039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6207:1
position: 6207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5039-6207:1:exon

PNAP_RS23685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23685
old locus tag: Pnap_4616
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005017435.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DSD1 family PLP-dependent enzyme
SIO_010081: PNAP_RS23685
subclass of: SO_0000673
so part of: PNAP_RS23685
location: 5039..6207
location: region:5039-6207:1
so has part: feature:5039-6207:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5039-6207:1:exon

PNAP_RS23690
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23690
old locus tag: Pnap_4617
so part of: sequence
location: 6239..7759
location: region:6239-7759:1
so has part: feature:6239-7759:1:exon
subclass of: SO_0000010

position:6239:1
position: 6239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7759:1
position: 7759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6239-7759:1:exon

PNAP_RS23690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23690
old locus tag: Pnap_4617
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019447192.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amidase family protein
translation: MNAEDLIALPATEMRRMIGARQLSPVELLNACIARIEAVNPYVNAVTATCFDRARTEARAAEAAVMAGGPLGLLHGLPLGVKDLEDTEGLLTTHGSPIYRGNVPTRDNVLVARLRAAGAIVTGKTNVPEMGAGANSRNPVWGATGNPFNPNLNAGGSSGGSAAALALDMLPVCTGSDTGGSLRIPAAKCGVVGFRPSPGVVPSSRKPLGWTPISVVGPMGRTVADACLQLAATAGVSATDPLTYEVDPLSFLLPQDLDLGGLRVGYTEDFGACAVDDGIRGVFREKIAAMRHLFRSCEPLALDLGEVHHCFDVLRAEAFVAGMRSAYERDPSSLGPNPRANYEMGAAMSLLDCAWAQAEQTRILARFQAAYCDVDIILAPTTPVSPFPWMLAHATHINGEQQENYYRWLSLTYVTTLTTHPSLSLPCGTDHAGMPFGLQIVGRFRADRHTLGVAQAMERAFASSEALRRPRPNARSLRHAEPALTSIVTAPPMLGGQASGMAASAV
SIO_010081: PNAP_RS23690
subclass of: SO_0000673
so part of: PNAP_RS23690
location: 6239..7759
location: region:6239-7759:1
so has part: feature:6239-7759:1:exon

WP_011798409.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6239-7759:1:exon

PNAP_RS28195
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS28195
so part of: sequence
location: complement(8170..8304)
location: region:8170-8304:-1
so has part: feature:8170-8304:-1:exon
subclass of: SO_0000010

position:8170:-1
position: 8170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8304:-1
position: 8304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8170-8304:-1:exon

PNAP_RS28195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS28195
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNCTVSLNIVDEVATVTLIHHGKFNAMSRVMWRHLVERIKPLAG
SIO_010081: PNAP_RS28195
subclass of: SO_0000673
so part of: PNAP_RS28195
location: complement(8170..8304)
location: region:8170-8304:-1
so has part: feature:8170-8304:-1:exon

WP_269667378.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8170-8304:-1:exon

PNAP_RS23695
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23695
old locus tag: Pnap_4619
so part of: sequence
location: complement(8668..8955)
location: region:8668-8955:-1
so has part: feature:8668-8955:-1:exon
subclass of: SO_0000010

position:8668:-1
position: 8668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8955:-1
position: 8955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8668-8955:-1:exon

PNAP_RS23695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23695
old locus tag: Pnap_4619
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013034160.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MAILTTPSFARIAKKLHAKEKKILDQAVRNVADDPTIGEEKKGDLSGVFVYKFKLNNQETLLAYSLNPDKRAPDEVVLLAVGPHENFYSQLKRSS
SIO_010081: PNAP_RS23695
subclass of: SO_0000673
so part of: PNAP_RS23695
location: complement(8668..8955)
location: region:8668-8955:-1
so has part: feature:8668-8955:-1:exon

WP_041377791.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8668-8955:-1:exon

PNAP_RS23700
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23700
old locus tag: Pnap_4620
so part of: sequence
location: complement(8966..9184)
location: region:8966-9184:-1
so has part: feature:8966-9184:-1:exon
subclass of: SO_0000010

position:8966:-1
position: 8966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9184:-1
position: 9184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8966-9184:-1:exon

PNAP_RS23700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23700
old locus tag: Pnap_4620
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018283732.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAIALKLSDELVQDAKAVAAAEHRSVPKQIEYWARIGKAVLENPELPLRLIQDTMLSLEEAKAGRVSAYTFG
SIO_010081: PNAP_RS23700
subclass of: SO_0000673
so part of: PNAP_RS23700
location: complement(8966..9184)
location: region:8966-9184:-1
so has part: feature:8966-9184:-1:exon

WP_041377792.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8966-9184:-1:exon

PNAP_RS26470
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS26470
pseudo: true
so part of: sequence
location: complement(<9786..10094)
location: region:9786-10094:-1
so has part: feature:9786-10094:-1:exon
subclass of: SO_0000010

position:9786:-1
position: 9786
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:10094:-1
position: 10094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9786-10094:-1:exon

PNAP_RS26470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS26470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612180.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: PNAP_RS26470
subclass of: SO_0000673
so part of: PNAP_RS26470
location: complement(<9786..10094)
location: region:9786-10094:-1
so has part: feature:9786-10094:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9786-10094:-1:exon

PNAP_RS23705
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23705
old locus tag: Pnap_4622
so part of: sequence
location: complement(10265..10786)
location: region:10265-10786:-1
so has part: feature:10265-10786:-1:exon
subclass of: SO_0000010

position:10265:-1
position: 10265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10786:-1
position: 10786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10265-10786:-1:exon

PNAP_RS23705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23705
old locus tag: Pnap_4622
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003054420.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MarR family transcriptional regulator
translation: MTKPITRNKPGVEDRVLKHWHAAVPNDRMAHLIKDATRVFLRSLQVRLARHDVQLGHWSFLRILWEQDGLTQRELSDEAGFMEPTTVIALRSMESLGYVTREHRPDNRKNLYVFLTPKGRRLKQALVPLAEEVNAVALTGLSDGDVAATRRALLAMIDNLSQDPAITDGSKGM
SIO_010081: PNAP_RS23705
subclass of: SO_0000673
so part of: PNAP_RS23705
location: complement(10265..10786)
location: region:10265-10786:-1
so has part: feature:10265-10786:-1:exon

WP_041377793.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10265-10786:-1:exon

PNAP_RS23710
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23710
old locus tag: Pnap_4623
so part of: sequence
location: complement(11157..12359)
location: region:11157-12359:-1
so has part: feature:11157-12359:-1:exon
subclass of: SO_0000010

position:11157:-1
position: 11157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12359:-1
position: 12359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11157-12359:-1:exon

PNAP_RS23710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23710
old locus tag: Pnap_4623
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018906996.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Gfo/Idh/MocA family oxidoreductase
translation: MSNRSSPSLRLGIAGLGRAFTLMLPTFLNDTRVQLVAACDPREDARQQFAKDFHAPVFSDIAALAADPTVDAIYIASPHQFHAEHTRIAAAQGKHVLVEKPMALSLSECDAMIKCCADAGVHLIVGHCHSFDTPYLRARELVRGGTLGRVRMVHALNYTDFLYRPRRPEELQTEAGGGVVFSQAAHQVDIVRLLAGGNVTSVRAVTGNWDPQRATEGAYAALLWFDNGAFASVTYSGYGHFDSDEWCNWRGEMGNMKDPSAYSAARRRLATVQSSQEEAELKASGTYGGSTYSATASLDSNRPNAYQHFGPIVISCEHGDIRPLPDGLQVYGDNLRQHLPLDLPKVPRSEVIDELYAAVVANAAPLHDGQWARATLEVCLALLESAQKGADVRLGSMDCA
SIO_010081: PNAP_RS23710
subclass of: SO_0000673
so part of: PNAP_RS23710
location: complement(11157..12359)
location: region:11157-12359:-1
so has part: feature:11157-12359:-1:exon

WP_011798415.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11157-12359:-1:exon

PNAP_RS23715
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23715
old locus tag: Pnap_4624
so part of: sequence
location: complement(12359..13327)
location: region:12359-13327:-1
so has part: feature:12359-13327:-1:exon
subclass of: SO_0000010

position:13327:-1
position: 13327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12359-13327:-1:exon

PNAP_RS23715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23715
old locus tag: Pnap_4624
EC number: 1.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018906997.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PDR/VanB family oxidoreductase
translation: MIPQTHADTQMPLRVDRAYDVAQGLRSFELVLPDGVELPAFTPGSHVKVQTPSGLLRKYSLCNAPDERHRYVITVKREEASRGGSASMHDDVKVGDILPTSVPENAFPLVDNAKSYLFIAGGIGITPMLSMIRSFGDDAPAPWKLIYLSRFAENTAFLDELGRPELKKNVKIHHSEGSPDQQFDLWPALEKPNTAHVYCCGPRGLMEAVRDMTGHWSPKNVHFESFDEGGKTLPDDKPFTVRMARTGQRFEVPVGVSILNAMREHGCNSASSCESGTCGTCRTGLLEGQADHRDMVLMPEEMDTQIMICVSRAKSAELVLDL
SIO_010081: PNAP_RS23715
subclass of: SO_0000673
so part of: PNAP_RS23715
location: complement(12359..13327)
location: region:12359-13327:-1
so has part: feature:12359-13327:-1:exon

WP_011798416.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12359-13327:-1:exon

PNAP_RS23720
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23720
old locus tag: Pnap_4625
so part of: sequence
location: complement(13367..14350)
location: region:13367-14350:-1
so has part: feature:13367-14350:-1:exon
subclass of: SO_0000010

position:13367:-1
position: 13367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14350:-1
position: 14350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13367-14350:-1:exon

PNAP_RS23720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23720
old locus tag: Pnap_4625
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012247277.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tripartite tricarboxylate transporter substrate binding protein
translation: MTTPHFFKAIAAVSIACSALAASLASHAQQFPSKPIRLVVPYSPGGLPDTVARIVSQRLSEGLGQAVVVENKPGGSGAVAAGMIAQAPADGYTLMMTDGPMLAITPLVMKKMSYDPVKDFTPVSLVGKAPLFLAVNASVKANTLDELIAQAKASPGSMNYGSSGLGSIHHLTAEAMNHALGIKVTHVPFKGSANSIPALVGEQVHMAFASPPSLMGFVKSGKVKLLAINSSKRSPLAPTVPTLSERIPGFDFAFNVAVLAKVGTPQAIVDRLSNEFAKVVKFPDVIQKLESAGVDPIGGSSEQLATALRSETKRVQDAGKAADLKVE
SIO_010081: PNAP_RS23720
subclass of: SO_0000673
so part of: PNAP_RS23720
location: complement(13367..14350)
location: region:13367-14350:-1
so has part: feature:13367-14350:-1:exon

WP_011798417.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13367-14350:-1:exon

PNAP_RS23725
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23725
old locus tag: Pnap_4626
so part of: sequence
location: complement(14401..15390)
location: region:14401-15390:-1
so has part: feature:14401-15390:-1:exon
subclass of: SO_0000010

position:14401:-1
position: 14401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15390:-1
position: 15390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14401-15390:-1:exon

PNAP_RS23725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23725
old locus tag: Pnap_4626
EC number: 4.1.1.55
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006157068.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4,5-dihydroxyphthalate decarboxylase
translation: MNKLQLSVAMGDYDRTRALYDGRVLIDGVDSIFMLLNPEEMFFRAMRSMDFDIAELSFSSYLVKHAKGECPYIAVPIFLSRAFRHTSIYVRKDRIAKPEDLKGRRIGVPEYQLTANVWARSILQDDFGVRPEHVTWVRGGIDTPGRPEKIKLKLPPEVHVEAAPDGTTISELLDRGEIDGFIGPRPPSASVLKNPHIGWLFDDPTAVAKDYYRRTGIFPIMHVVGIRKELAQQHPWLPGAVVKAFTQSKAAALALLGDTSATKVTLPFVEEQLKAARETMGEDYWSYGVAPARKTLEAFVRHHHAQGLSERLVGVEELFHPSTYESYSI
SIO_010081: PNAP_RS23725
subclass of: SO_0000673
so part of: PNAP_RS23725
location: complement(14401..15390)
location: region:14401-15390:-1
so has part: feature:14401-15390:-1:exon

WP_011798418.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14401-15390:-1:exon

PNAP_RS23730
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23730
old locus tag: Pnap_4627
so part of: sequence
location: complement(15393..16712)
location: region:15393-16712:-1
so has part: feature:15393-16712:-1:exon
subclass of: SO_0000010

position:15393:-1
position: 15393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16712:-1
position: 16712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15393-16712:-1:exon

PNAP_RS23730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23730
old locus tag: Pnap_4627
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013953748.1
GO function: GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rieske 2Fe-2S domain-containing protein
translation: MMTNEENELLCRVEGEAPMGQLMRRHWTPICLLEEVGEADGMPVKARAFGEDLVVFRDTDGRVGVMDEHCPHRGASLVYGRNEEGGLRCLYHGWKMDVQGNVLEMASEPAASGMADKVKHKAYPTQEWGGMVWAYMGPKDAVPEFQPPAWAPTADARVSIAKVLLPCNWAQILEGAIDSAHSSSLHSSDMVPARVDSAKATANTWLRPSTDKAPRMQVQRAGYGFRYAALRRPITNATANDYVRSTVFVAPATALIPPNNLYNVANINVPMDDVSTVFYFIAWGHPAQTPETETWRKFLRQTVGIDLDENYRPLRTQENRFWQDRQAMKAGNFTGISGFPNQDVAMWMSMGAIANRSHDRLGASDLAIVEFRKQMLDAVQAFQRGEPAIGTGELAIPATVCAFQAIVPKTTDWREYEVKYIWAGDGPHPEMEPSYSVKA
SIO_010081: PNAP_RS23730
subclass of: SO_0000673
so part of: PNAP_RS23730
location: complement(15393..16712)
location: region:15393-16712:-1
so has part: feature:15393-16712:-1:exon

WP_041377761.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15393-16712:-1:exon

PNAP_RS23735
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23735
old locus tag: Pnap_4628
so part of: sequence
location: complement(16736..17203)
location: region:16736-17203:-1
so has part: feature:16736-17203:-1:exon
subclass of: SO_0000010

position:16736:-1
position: 16736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17203:-1
position: 17203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16736-17203:-1:exon

PNAP_RS23735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23735
old locus tag: Pnap_4628
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017404446.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hemerythrin domain-containing protein
translation: MMKSSAAVAYFWEDKLLIGHEQMDDEHQAFAHIIQALLKAPDNAIASCLADVIAHATQHFAQEDEWMCNLDFPARQCHMDEHAAVLRSAAGVKLRVHAGDHQAARLFSQELAAWLPPHVQHLDSALAAWICKLAWNAKPLVFHRQSRTRAATAIA
SIO_010081: PNAP_RS23735
subclass of: SO_0000673
so part of: PNAP_RS23735
location: complement(16736..17203)
location: region:16736-17203:-1
so has part: feature:16736-17203:-1:exon

WP_011798420.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16736-17203:-1:exon

PNAP_RS23745
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23745
old locus tag: Pnap_4629
pseudo: true
so part of: sequence
location: <17614..17975
location: region:17614-17975:1
so has part: feature:17614-17975:1:exon
subclass of: SO_0000010

position:17614:1
position: 17614
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:17975:1
position: 17975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17614-17975:1:exon

PNAP_RS23745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23745
old locus tag: Pnap_4629
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012355561.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: PNAP_RS23745
subclass of: SO_0000673
so part of: PNAP_RS23745
location: <17614..17975
location: region:17614-17975:1
so has part: feature:17614-17975:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17614-17975:1:exon

PNAP_RS23750
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23750
old locus tag: Pnap_4630
so part of: sequence
location: complement(18006..19049)
location: region:18006-19049:-1
so has part: feature:18006-19049:-1:exon
subclass of: SO_0000010

position:18006:-1
position: 18006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19049:-1
position: 19049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18006-19049:-1:exon

PNAP_RS23750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23750
old locus tag: Pnap_4630
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611837.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS701-like element ISPna6 family transposase
translation: MRKPTRPPTARCTLPMYMGFLMSEPKSSTCTRLSQVMGISHDSVNRFLLRESYEPKDLFDEAQKLLDMVGGTLNVDDTTLDKPYSQKMALVGHFWSGKHRRAVKGLNLVTLYYTDVQGRSLPVNYRVYDKADDKTKNDYFQDMLAEVLAWGLRPAFATGDSWYSCEKNLKTVKNHQMGLMFAVEANRTVSVEKGTWVQVQRLDVPEEGLMVWLRNFGPVKLFRTRLKDQLRHYLACLPDAQGYSTFGRLNFQKLHDQHWGIEQYHRLLKQVCNVERFQVRGKVPILNHIFAALCSFVQLQEMRFTHAIVNAYQWKTELFTQVVATFVTGFIPGKKHLNPQFRTTVNA
SIO_010081: PNAP_RS23750
subclass of: SO_0000673
so part of: PNAP_RS23750
location: complement(18006..19049)
location: region:18006-19049:-1
so has part: feature:18006-19049:-1:exon

WP_076611837.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18006-19049:-1:exon

PNAP_RS27430
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS27430
so part of: sequence
location: complement(19363..19512)
location: region:19363-19512:-1
so has part: feature:19363-19512:-1:exon
subclass of: SO_0000010

position:19363:-1
position: 19363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19512:-1
position: 19512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19363-19512:-1:exon

PNAP_RS27430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS27430
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKIKIAPVHSIRNFGVAMPLSLMGFAGWRLNRNKALGVHRILRALPTKV
SIO_010081: PNAP_RS27430
subclass of: SO_0000673
so part of: PNAP_RS27430
location: complement(19363..19512)
location: region:19363-19512:-1
so has part: feature:19363-19512:-1:exon

WP_157040545.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19363-19512:-1:exon

PNAP_RS23755
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
gene: nadC
locus tag: PNAP_RS23755
old locus tag: Pnap_4632
so part of: sequence
location: 19862..20719
location: region:19862-20719:1
so has part: feature:19862-20719:1:exon
subclass of: SO_0000010

position:19862:1
position: 19862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20719:1
position: 20719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19862-20719:1:exon

PNAP_RS23755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
gene: nadC
locus tag: PNAP_RS23755
old locus tag: Pnap_4632
EC number: 2.4.2.19
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011796883.1
GO function: GO:0004514 - nicotinate-nucleotide diphosphorylase (carboxylating) activity [Evidence IEA]
GO process: GO:0019363 - pyridine nucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carboxylating nicotinate-nucleotide diphosphorylase
translation: MKNEKFNQTVHADVARALQEDVGTGDLTAALVPQEAFARATIICRQEAVICGQPWVMEILKQIAPTAKTAWSVQDGQHCEPGQVIVEITGPARDLLTAERTCLNFLQTLSAVATKTARYVNEVKGTRAVILDTRKTIPGLRVAEKYAVRCGGGKNHRMGLFDAMLIKENHIAAAGGLTIAFRAAQKMVDQVDFIQVEVETLDQLEEALEAGVTMVLLDNMPLGRVRQAVEMAQGCCSLEMSGGVTFDNLRACAETGVDRISVGALIKDITAVDFSMRFQDRPVER
SIO_010081: PNAP_RS23755
subclass of: SO_0000673
so part of: PNAP_RS23755
location: 19862..20719
location: region:19862-20719:1
so has part: feature:19862-20719:1:exon

WP_011798423.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19862-20719:1:exon

PNAP_RS23760
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23760
old locus tag: Pnap_4633
so part of: sequence
location: 20814..21116
location: region:20814-21116:1
so has part: feature:20814-21116:1:exon
subclass of: SO_0000010

position:20814:1
position: 20814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21116:1
position: 21116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20814-21116:1:exon

PNAP_RS23760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23760
old locus tag: Pnap_4633
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010894925.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system MqsR family toxin
translation: MEKGTPHCKLSVVKALIEADRVKATASAFNGARDLGINDLAGMCAVVMSLTSTDFYKSMTTHADHRIWQDVYRAKTANSADVYLKLTVIDDVLIVSFKEL
SIO_010081: PNAP_RS23760
subclass of: SO_0000673
so part of: PNAP_RS23760
location: 20814..21116
location: region:20814-21116:1
so has part: feature:20814-21116:1:exon

WP_011798424.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20814-21116:1:exon

PNAP_RS23765
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23765
old locus tag: Pnap_4634
so part of: sequence
location: 21119..21520
location: region:21119-21520:1
so has part: feature:21119-21520:1:exon
subclass of: SO_0000010

position:21119:1
position: 21119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21520:1
position: 21520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21119-21520:1:exon

PNAP_RS23765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23765
old locus tag: Pnap_4634
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004090697.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system MqsA family antitoxin
translation: MKCPCCGAAELIHDTRDMPYTYKGETATIPAVTGDFCPACGEVILNREHGDRYSELLGQFQRQVNAAYIDPDYIARVRKKLDLDQRQAAEIFGGGVNAFSRYENGKTRPSLALVKLLKVLERHPDLLNEVRTT
SIO_010081: PNAP_RS23765
subclass of: SO_0000673
so part of: PNAP_RS23765
location: 21119..21520
location: region:21119-21520:1
so has part: feature:21119-21520:1:exon

WP_011798425.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21119-21520:1:exon

PNAP_RS23770
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23770
so part of: sequence
location: 22595..22801
location: region:22595-22801:1
so has part: feature:22595-22801:1:exon
subclass of: SO_0000010

position:22595:1
position: 22595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22801:1
position: 22801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22595-22801:1:exon

PNAP_RS23770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23770
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGAPMALAGRAIGVPSTITTFVNLLAVVEQIPGVLRQDLLEAIVVTADVGGATDGASDDHEELPSFVL
SIO_010081: PNAP_RS23770
subclass of: SO_0000673
so part of: PNAP_RS23770
location: 22595..22801
location: region:22595-22801:1
so has part: feature:22595-22801:1:exon

WP_157040546.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22595-22801:1:exon

PNAP_RS23775
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23775
old locus tag: Pnap_4635
pseudo: true
so part of: sequence
location: 22839..25060
location: region:22839-25060:1
so has part: feature:22839-25060:1:exon
subclass of: SO_0000010

position:22839:1
position: 22839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25060:1
position: 25060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22839-25060:1:exon

PNAP_RS23775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23775
old locus tag: Pnap_4635
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017172610.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase
SIO_010081: PNAP_RS23775
subclass of: SO_0000673
so part of: PNAP_RS23775
location: 22839..25060
location: region:22839-25060:1
so has part: feature:22839-25060:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22839-25060:1:exon

PNAP_RS23780
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23780
old locus tag: Pnap_4637
so part of: sequence
location: complement(25476..26951)
location: region:25476-26951:-1
so has part: feature:25476-26951:-1:exon
subclass of: SO_0000010

position:25476:-1
position: 25476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26951:-1
position: 26951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25476-26951:-1:exon

PNAP_RS23780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23780
old locus tag: Pnap_4637
inference: COORDINATES: protein motif:HMM:NF028103.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-primase RepB domain-containing protein
translation: MHYFRKEEADKGGQAAFVDLGQRIEVHDWRHADATLAAMQLSAHKWGRIKVTGSEDFKALCARLAAAHGFTISNPELQDRIAQERERIQRSLQERAQEETAQPAPRAMASAPIEQFEQFERYAQAVDAQRYRVTSVRLKPDGGRMTFLLDKRAGVSQGCTPEEVRQRMPRMQRLSERGERIDYTPLSADKHYLLIDAMSQAKLDQLLQDGYRPAVVLQSSPERFQALITVKKFGAFNDDEVGRQLARQLNTEYGNPDLLGGCIQPHPAPGYVDRQSTLRQADGACWEVRLLQAERCECAKTLEIALRISAEKGQQAAPQGKEAVKAVTPSGHTPQPDPALALATAAALDAYWRHYRDVLSRHTAGRVNLSRVDSMIAVRLRVTGHAQEAIADALRLCAPGIRETLETRDWLAYARRAARFAFSAAGDLQAAELEVHRRAWEMLGGRHQEHKDGQNKAQTMQRSRDALKEIERMEALGRSSPRPSARPKRIG
SIO_010081: PNAP_RS23780
subclass of: SO_0000673
so part of: PNAP_RS23780
location: complement(25476..26951)
location: region:25476-26951:-1
so has part: feature:25476-26951:-1:exon

WP_041377765.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25476-26951:-1:exon

PNAP_RS23785
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23785
old locus tag: Pnap_4638
pseudo: true
so part of: sequence
location: complement(27252..>27455)
location: region:27252-27455:-1
so has part: feature:27252-27455:-1:exon
subclass of: SO_0000010

position:27252:-1
position: 27252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27455:-1
position: 27455
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27252-27455:-1:exon

PNAP_RS23785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23785
old locus tag: Pnap_4638
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006484960.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase domain-containing protein
SIO_010081: PNAP_RS23785
subclass of: SO_0000673
so part of: PNAP_RS23785
location: complement(27252..>27455)
location: region:27252-27455:-1
so has part: feature:27252-27455:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27252-27455:-1:exon

PNAP_RS23790
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23790
so part of: sequence
location: complement(27458..27769)
location: region:27458-27769:-1
so has part: feature:27458-27769:-1:exon
subclass of: SO_0000010

position:27458:-1
position: 27458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27769:-1
position: 27769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27458-27769:-1:exon

PNAP_RS23790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23790
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MALLAGVENTRAASPKSSLRQQQVQLGQRAHRGLRGAQFHVSASCGIEHPGGNHDHDAGSRLQVDYLAVGTLLAVLALEAASIQRMPAIEDFNFLPDMGTMTR
SIO_010081: PNAP_RS23790
subclass of: SO_0000673
so part of: PNAP_RS23790
location: complement(27458..27769)
location: region:27458-27769:-1
so has part: feature:27458-27769:-1:exon

WP_041376462.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27458-27769:-1:exon

PNAP_RS23795
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23795
old locus tag: Pnap_4640
so part of: sequence
location: 27967..30036
location: region:27967-30036:1
so has part: feature:27967-30036:1:exon
subclass of: SO_0000010

position:27967:1
position: 27967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30036:1
position: 30036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27967-30036:1:exon

PNAP_RS23795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23795
old locus tag: Pnap_4640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004272601.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MTTSDLLPAAVLRRKAVVYVRQSTQSQVQTNLESQRRQYDLVAQARRLGFAQVEVIDDDLGRSASGMVDRPGFERLVAWLCAGEVGAVLCFDASRLARNGRDWHHLLELCGLVEARVIDPDGVYDPCRPNDRLLLGMKGSISEFELGVIRARMFEAARAKAHRGELRISVPIGYVWHRQIGLGLDPDMRLQETIRLIFARFRTLGSARQVMLSLAADDVHFPRPSDGKKMVSFDWTPIRYRNVISILKNPFYAGVYAYGKSEKRTTLVQGRLRKTYKHGKPLDRWDVMIKDHHEAYIDWAEFERNQKQLAVNAYGKVDGTKSGRGGRALLAGMLCCGRCGRRLTVAYTGRGVPQPVYRCDRPNLQLAQPRCFTFGARRPDEAIARELLRAVEPLAVEAALQAERRYMQVQADQRRIVELELQQARYEAGLAERRYAACDPDHRLIAAQLEKSWEAALQRVLACEQRLNVARQVQSSARPDLTGLEEDLAAAWDAPGVTMRARQQLLRTLVKDIVADVDDQAREVVLTIHWRGGQHSQVRVVKPRTGEHGCRTPDEALAVMRSMAGKWSDEHIAATLNRMGLPTGQAKTWTAHRVSSVRRVNDIHAYRSAEKDGQWLTMSEAAAKLGVNNHRIRRLIKEGLLPAEQVVPRAPYQIRASDLLEQRVIDAIARTLSPCRAVSEKQMSMFSST
SIO_010081: PNAP_RS23795
subclass of: SO_0000673
so part of: PNAP_RS23795
location: 27967..30036
location: region:27967-30036:1
so has part: feature:27967-30036:1:exon

WP_011798428.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27967-30036:1:exon

PNAP_RS23800
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23800
old locus tag: Pnap_4641
so part of: sequence
location: complement(30049..31389)
location: region:30049-31389:-1
so has part: feature:30049-31389:-1:exon
subclass of: SO_0000010

position:30049:-1
position: 30049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31389:-1
position: 31389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30049-31389:-1:exon

PNAP_RS23800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23800
old locus tag: Pnap_4641
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798486.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family transposase
translation: MAAKVLQHIGQQSQQIDSQAKTIEFKEARIQSILFELRRLKAWRFDAKTERMNAEQRQLFEETLAADQADLEAQLAALKAVAKDSGDTADTEHDTRRKPKRQALPEHLKRVEHHHEPENTTCGCGQAMVRIGEDVSERLDIIPAEFFVHRHIRGKWACKCCQTLVQEPVGPQIIDKGMPTAGLVAHTAVSRFVDHIPYYRQEQINARSGVHTPRSTLASWSGQAGAALVPLYAAHREFVLSCAVVHADETPVAMLDPGAGKTKRAYVWAYARSGFDVSPGVVYEFCLGRGAKYPLEFLKGWSGTLISDGYGVYDQVLKQESRVGAACLAHARRKFDELVKDRLSPVGTQVIQRIAALYQIERQVKGLSPEDRLSIRQSSAKPLCKDLHAWLKRERQRVPEGSATAKAIDYSLNRWEALTTYLADGNVQIDNNHLENLIRPWAMACS
SIO_010081: PNAP_RS23800
subclass of: SO_0000673
so part of: PNAP_RS23800
location: complement(30049..31389)
location: region:30049-31389:-1
so has part: feature:30049-31389:-1:exon

WP_232290869.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30049-31389:-1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 365044
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF01725
inference: COORDINATES: profile:INFERNAL:1.1.1
note: SAM-I-IV-variant riboswitch; SAM riboswitches modulate the expression of downstream genes in response to levels of S-adenosylmethionine; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: S-adenosylmethionine
so part of: sequence
location: complement(31598..31707)
location: region:31598-31707:-1
so has part: feature:31598-31707:-1:region

position:31598:-1
position: 31598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31707:-1
position: 31707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31598-31707:-1:region

PNAP_RS23805
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23805
old locus tag: Pnap_4642
pseudo: true
so part of: sequence
location: 32075..>33033
location: region:32075-33033:1
so has part: feature:32075-33033:1:exon
subclass of: SO_0000010

position:32075:1
position: 32075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33033:1
position: 33033
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32075-33033:1:exon

PNAP_RS23805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23805
old locus tag: Pnap_4642
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011799848.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS110 family transposase
SIO_010081: PNAP_RS23805
subclass of: SO_0000673
so part of: PNAP_RS23805
location: 32075..>33033
location: region:32075-33033:1
so has part: feature:32075-33033:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32075-33033:1:exon

PNAP_RS26475
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS26475
old locus tag: Pnap_4643
pseudo: true
so part of: sequence
location: <33073..33267
location: region:33073-33267:1
so has part: feature:33073-33267:1:exon
subclass of: SO_0000010

position:33073:1
position: 33073
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:33267:1
position: 33267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33073-33267:1:exon

PNAP_RS26475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS26475
old locus tag: Pnap_4643
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011235908.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS4 family transposase
SIO_010081: PNAP_RS26475
subclass of: SO_0000673
so part of: PNAP_RS26475
location: <33073..33267
location: region:33073-33267:1
so has part: feature:33073-33267:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:33073-33267:1:exon

PNAP_RS26480
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS26480
old locus tag: Pnap_4644
so part of: sequence
location: complement(33334..34608)
location: region:33334-34608:-1
so has part: feature:33334-34608:-1:exon
subclass of: SO_0000010

position:33334:-1
position: 33334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34608:-1
position: 34608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33334-34608:-1:exon

PNAP_RS26480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS26480
old locus tag: Pnap_4644
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020158543.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VWA domain-containing protein
translation: MKILKGQRISIAKFLPNTNHAFQIELSITGISVDFSCFGLNANGKLLRDEYMIFFNQPKTSCGGISLSFTNNLAMFACDLNKLPATVESLSFTAAIDASQTMNQMQSGYFRFLSNNSEIGRFNFYGSDFNNEKSLMLGDIYRKNGEWRFNAFGQGFNGGLSALLEHFGGEEDITPLVSSVQKVQLSKALSLEKKLEKEAPQLLSLAKKLSISLEKNQLQDVIAKVAIVIDASGSMSASYKNGTIQAVIDRIVLLAARLDDDGNLDTWFYASSHKKYLDMTISNVKDYLDKNTESGFLGIIKGLGVGNNEPPVMQEVLETYKNSNLPALVIFITDGGIDKASSIKQILIEASNYPIFWQFVGVAGSGYGILEELDNMKGRAIDNAGFFAVDDLKKIKDEELYNRLLSEFPVWLKEAKKKGILANN
SIO_010081: PNAP_RS26480
subclass of: SO_0000673
so part of: PNAP_RS26480
location: complement(33334..34608)
location: region:33334-34608:-1
so has part: feature:33334-34608:-1:exon

WP_157040548.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33334-34608:-1:exon

PNAP_RS27435
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS27435
pseudo: true
so part of: sequence
location: <34938..35119
location: region:34938-35119:1
so has part: feature:34938-35119:1:exon
subclass of: SO_0000010

position:34938:1
position: 34938
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:35119:1
position: 35119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34938-35119:1:exon

PNAP_RS27435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS27435
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008650706.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase domain-containing protein
SIO_010081: PNAP_RS27435
subclass of: SO_0000673
so part of: PNAP_RS27435
location: <34938..35119
location: region:34938-35119:1
so has part: feature:34938-35119:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:34938-35119:1:exon

PNAP_RS26695
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS26695
pseudo: true
so part of: sequence
location: complement(<35274..>35441)
location: region:35274-35441:-1
so has part: feature:35274-35441:-1:exon
subclass of: SO_0000010

position:35274:-1
position: 35274
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:35441:-1
position: 35441
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35274-35441:-1:exon

PNAP_RS26695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS26695
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611876.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: PNAP_RS26695
subclass of: SO_0000673
so part of: PNAP_RS26695
location: complement(<35274..>35441)
location: region:35274-35441:-1
so has part: feature:35274-35441:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35274-35441:-1:exon

PNAP_RS27805
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS27805
pseudo: true
so part of: sequence
location: complement(35589..>35693)
location: region:35589-35693:-1
so has part: feature:35589-35693:-1:exon
subclass of: SO_0000010

position:35589:-1
position: 35589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35693:-1
position: 35693
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35589-35693:-1:exon

PNAP_RS27805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS27805
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011001645.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5/IS1182 family transposase
SIO_010081: PNAP_RS27805
subclass of: SO_0000673
so part of: PNAP_RS27805
location: complement(35589..>35693)
location: region:35589-35693:-1
so has part: feature:35589-35693:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35589-35693:-1:exon

PNAP_RS23820
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23820
old locus tag: Pnap_4647
so part of: sequence
location: 35810..37090
location: region:35810-37090:1
so has part: feature:35810-37090:1:exon
subclass of: SO_0000010

position:35810:1
position: 35810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37090:1
position: 37090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35810-37090:1:exon

PNAP_RS23820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23820
old locus tag: Pnap_4647
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798435.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5-like element ISPna3 family transposase
translation: MGPRPRTPQTDELPRPRLDEQLKMSHPLVRLANLMNWEEIERSFGAHFTSSRGRPALSPRLVAGLLYLQHANDASDEAVVATWLENPYWQYFCGETYLQTELPIDPSSLTRWRKRIGEEGVEVLLAVTIEAARAAGLIKKSSLDKIIVDTTVMPKAIAHPTDSRLLEKSRQHLVRLADEHSLQLRQNYNQQAPRMAAQIGRYAHARQFKRMRKTLKALRIRVGRVYREVTRKLAQLPEQARHKARDLLHRVGRILTQQPRDKNKLYALHAPEAECISKGKARTPYEFGVKVTIATTLKEGLVVGMRSMPGNPYDGHTLDEAIEQVEILAEQRPGMAIVDKGYRGAQVEGVQILRSGQRRGVTRAMKAMIKRRSAIEPTIGHMKMKGRLARNPLKGTLGDALHAVLCGAGHNIRLMLKKLHVSPVAP
SIO_010081: PNAP_RS23820
subclass of: SO_0000673
so part of: PNAP_RS23820
location: 35810..37090
location: region:35810-37090:1
so has part: feature:35810-37090:1:exon

WP_011798435.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35810-37090:1:exon

PNAP_RS23825
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23825
old locus tag: Pnap_4648
pseudo: true
so part of: sequence
location: complement(<37113..>37787)
location: region:37113-37787:-1
so has part: feature:37113-37787:-1:exon
subclass of: SO_0000010

position:37113:-1
position: 37113
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:37787:-1
position: 37787
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37113-37787:-1:exon

PNAP_RS23825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23825
old locus tag: Pnap_4648
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012218039.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5 family transposase
SIO_010081: PNAP_RS23825
subclass of: SO_0000673
so part of: PNAP_RS23825
location: complement(<37113..>37787)
location: region:37113-37787:-1
so has part: feature:37113-37787:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:37113-37787:-1:exon

PNAP_RS28085
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS28085
pseudo: true
so part of: sequence
location: complement(<37938..38773)
location: region:37938-38773:-1
so has part: feature:37938-38773:-1:exon
subclass of: SO_0000010

position:37938:-1
position: 37938
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:38773:-1
position: 38773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37938-38773:-1:exon

PNAP_RS28085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS28085
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611498.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: PNAP_RS28085
subclass of: SO_0000673
so part of: PNAP_RS28085
location: complement(<37938..38773)
location: region:37938-38773:-1
so has part: feature:37938-38773:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:37938-38773:-1:exon

PNAP_RS23840
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23840
old locus tag: Pnap_4651
so part of: sequence
location: complement(38842..39069)
location: region:38842-39069:-1
so has part: feature:38842-39069:-1:exon
subclass of: SO_0000010

position:38842:-1
position: 38842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39069:-1
position: 39069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38842-39069:-1:exon

PNAP_RS23840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23840
old locus tag: Pnap_4651
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIASFTQLSCFRNQLFDRSYALQRFVLVYGGINKCKFSDIDRIDFLISSLLTFSCTQVARMQTKQDKAPAHDAMT
SIO_010081: PNAP_RS23840
subclass of: SO_0000673
so part of: PNAP_RS23840
location: complement(38842..39069)
location: region:38842-39069:-1
so has part: feature:38842-39069:-1:exon

WP_041377766.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38842-39069:-1:exon

PNAP_RS26495
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS26495
old locus tag: Pnap_4652
so part of: sequence
location: 39299..40243
location: region:39299-40243:1
so has part: feature:39299-40243:1:exon
subclass of: SO_0000010

position:39299:1
position: 39299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40243:1
position: 40243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39299-40243:1:exon

PNAP_RS26495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS26495
old locus tag: Pnap_4652
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLICVSCILLSVLVGCAKNEASCSDETATSVARSLIASSLAEKIETEVKGTKKDVDTSAINALVAQFKISLGDIRTSKKDPNSSKVFCSATIGVQFSEAVIQDADKVRKSISYKPSTEFVRDSGLKFEAYKLIGDFEYSVQPTDDGKKVFAELQGNQKPLLIAAEIASSALLKTVVESAEALKASERDAAQAKIQQAEIQKQQSETEQRQAEEIQKTLRAKNASLQLEEAQLAITQANAKINVAWNAISKIEREAMLPEQRVWLKRRELDCKTKGVAEQATDLTAQETVRLLCEVEMTQKRTDYLDLKLLKTS
SIO_010081: PNAP_RS26495
subclass of: SO_0000673
so part of: PNAP_RS26495
location: 39299..40243
location: region:39299-40243:1
so has part: feature:39299-40243:1:exon

WP_011798440.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39299-40243:1:exon

PNAP_RS23845
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23845
old locus tag: Pnap_4653
so part of: sequence
location: 40483..41526
location: region:40483-41526:1
so has part: feature:40483-41526:1:exon
subclass of: SO_0000010

position:40483:1
position: 40483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41526:1
position: 41526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40483-41526:1:exon

PNAP_RS23845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23845
old locus tag: Pnap_4653
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017879231.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF475 domain-containing protein
translation: MKHFKISFFITLILLGLGAFWGYGLGGTTGALQALFVVSILAVMEVSLSFDNAVVNASVLRTWNPFWQKLFLTVGIIIAVFGMRLVFPILIVSIATGLGLLDVMTMALNTPEEYSRHLTANHAQVAAFGGSFLLLVFLNFLFDQEKDLHWLGWIEEKLGKHGNEGLSTLVAMLAVFGCMTLVPEVQKLSVLMAGISGIAVYLAVSFLSGLLEAEEHDPVIGTAIKRGSIGGFLYLEVLDASFSFDGVIGAFAITSDVVIIMLGLAIGAMFVRSMTVFLVHKGTLEEFVYLEHGAHYAIGILALIMLASVKFHISEWFTGLSGVAFICLSLWSSVHYKRQRAMEISYS
SIO_010081: PNAP_RS23845
subclass of: SO_0000673
so part of: PNAP_RS23845
location: 40483..41526
location: region:40483-41526:1
so has part: feature:40483-41526:1:exon

WP_041377801.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40483-41526:1:exon

PNAP_RS23850
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23850
old locus tag: Pnap_4654
so part of: sequence
location: 41568..42146
location: region:41568-42146:1
so has part: feature:41568-42146:1:exon
subclass of: SO_0000010

position:41568:1
position: 41568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42146:1
position: 42146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41568-42146:1:exon

PNAP_RS23850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23850
old locus tag: Pnap_4654
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018604805.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TerD family protein
translation: MAISLQKGGNVNLSKTDPNLKQVLLGLGWDARSTDGVDFDLDASIFMVTENGRVRSDSDFIFYGQLRSPCGSIEHTGDNRTGAGEGDDEGLKIKLDQIPSVITRLVVAVTIHDAQVRKQNFGMVHDAFIRLVNIETNIEITRFDLSEDYSTETAMIFGEIYRYGSEWKFKAVGQGYAGGLKALAIQHGVNVS
SIO_010081: PNAP_RS23850
subclass of: SO_0000673
so part of: PNAP_RS23850
location: 41568..42146
location: region:41568-42146:1
so has part: feature:41568-42146:1:exon

WP_011798442.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41568-42146:1:exon

PNAP_RS23855
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23855
old locus tag: Pnap_4655
so part of: sequence
location: 42183..42758
location: region:42183-42758:1
so has part: feature:42183-42758:1:exon
subclass of: SO_0000010

position:42183:1
position: 42183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42758:1
position: 42758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42183-42758:1:exon

PNAP_RS23855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23855
old locus tag: Pnap_4655
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017879230.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TerD family protein
translation: MAISLQKGGNVNLSKEAPSLKKLVIGLGWDSRATDGAAFDLDGSAFLLKVDGKARSDADFIFYNNLKSTDGSVTHAGDNTSGTGEGDDEKLTIDLAMVPAEIEKITIGVTIHDAEARKQNFGMVGKAYIRCLDANGDKEIARYDLSEDSSTETAMIFGDIYRAGAEWKFKAVGQGFAGGLGPLARSFGIGT
SIO_010081: PNAP_RS23855
subclass of: SO_0000673
so part of: PNAP_RS23855
location: 42183..42758
location: region:42183-42758:1
so has part: feature:42183-42758:1:exon

WP_011798443.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42183-42758:1:exon

PNAP_RS23865
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23865
old locus tag: Pnap_4657
so part of: sequence
location: 43355..43936
location: region:43355-43936:1
so has part: feature:43355-43936:1:exon
subclass of: SO_0000010

position:43355:1
position: 43355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43936:1
position: 43936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43355-43936:1:exon

PNAP_RS23865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23865
old locus tag: Pnap_4657
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017879228.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TerD family protein
translation: MAVNLQKGQKISLDKEAGVKLTKIIMGLGWDAVKSKGFFGIGGSTPDIDLDASCIMFDEQGTQIDSVWFRQLKSKDGSVIHTGDNRTGDGDGDDEQIIVDLTRVPERVKSLVFTVNSFTGQNFSKIENATCRIVNAGNNKEVARFNLTTLGAHNAQIMAKIYRHGSEWKMHAIGEIGNGRTFEELMPQITPHL
SIO_010081: PNAP_RS23865
subclass of: SO_0000673
so part of: PNAP_RS23865
location: 43355..43936
location: region:43355-43936:1
so has part: feature:43355-43936:1:exon

WP_011798444.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43355-43936:1:exon

PNAP_RS23870
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23870
old locus tag: Pnap_4658
so part of: sequence
location: 43944..44963
location: region:43944-44963:1
so has part: feature:43944-44963:1:exon
subclass of: SO_0000010

position:43944:1
position: 43944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44963:1
position: 44963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43944-44963:1:exon

PNAP_RS23870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23870
old locus tag: Pnap_4658
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017876786.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-grasp domain-containing protein
translation: MKRVWFNKTFSSVGSAIRLIREADEAADYHLVCSSTNPHAPAFLAAHESAVEPSGLKGQAYLDWCLEFCHEHGIGIFIPGKEASLLSAERQQFEAQGTRLLCAASQDMLHLLHDKAQFYQSVNCLTPPAAFRVVETAQQFEAAYRALRKEHAKLCIKPSVSVYGLGFSVLDEKRSSAQLLLEGVQYHIGLDDLRRGFEVMETFRTMLVMEYLDGHEFSVDCIGDNGRLVCAIPRKKPQLAGQGQLIDMREDILESTRQLTAAYGLNGVFNVQFREGQNGLGLLEINPRMSGGIAMACLAGPNLPYLALAGFDRGFDGLSIPPIRAGVRVGELSLATELP
SIO_010081: PNAP_RS23870
subclass of: SO_0000673
so part of: PNAP_RS23870
location: 43944..44963
location: region:43944-44963:1
so has part: feature:43944-44963:1:exon

WP_011798445.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43944-44963:1:exon

PNAP_RS23875
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23875
old locus tag: Pnap_4659
so part of: sequence
location: 45017..46171
location: region:45017-46171:1
so has part: feature:45017-46171:1:exon
subclass of: SO_0000010

position:45017:1
position: 45017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46171:1
position: 46171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45017-46171:1:exon

PNAP_RS23875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23875
old locus tag: Pnap_4659
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005663482.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoribosyltransferase domain-containing protein
translation: MRRVTLPTGLMEIKVDAGPFRLDDLIGFAARANTRRGFLFLSKVLGKHWPVTPRLMHAIHTELAARVPANLPGPVIFIAMAETAIGLGQGVFEAYKTMHPQREALFLHTTRYHVGGMPIIEFEEAHSHAPRQFLHRPGDVGLQHILLSARALVLVDDEASTGNTFLNLSAACRALNPAIEHIHLAAITNFMGREVNEALSGRFGLPVTVGAALSGEYAFTVGQLQQADGAAQRFEAHVDRGASACFGRLGLDRPLNQPAALAGRLSAGIAPSERVLVLGTGEFMHMAFLLGRALEACGTNVVVQSTTRSPILQWGAVGHILKFSDNYGEGVENFVYNVEPGQYEHVFICHETPPNAALQQLAKAVKGRLFHFLSESHCEEIPVR
SIO_010081: PNAP_RS23875
subclass of: SO_0000673
so part of: PNAP_RS23875
location: 45017..46171
location: region:45017-46171:1
so has part: feature:45017-46171:1:exon

WP_011798446.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45017-46171:1:exon

PNAP_RS23880
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23880
old locus tag: Pnap_4660
so part of: sequence
location: 46149..46904
location: region:46149-46904:1
so has part: feature:46149-46904:1:exon
subclass of: SO_0000010

position:46149:1
position: 46149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46904:1
position: 46904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46149-46904:1:exon

PNAP_RS23880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23880
old locus tag: Pnap_4660
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017876788.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAD family hydrolase
translation: MKKFLFVDLDDTLFQTPGKCADEKDLHPAAYLKDGSVCSFSTPRQRAFFALMNKEMTLIPATARNRDALSRVDLPFSSHAIIDYGGVVLTPDGAPDGEWLDLMRADMALALGGLKEAIDVIDRYSASVGLKGRARLIEDYATPFYIVVKDPDKQAERLESIEREALTDWIASPTGQDFYIHRNGNNLAVLPKALNKARAVHYLRQKLQTEHGDIMTLGMGDSKSDARFMAACDYAIVPSGTQLSSLTVGAL
SIO_010081: PNAP_RS23880
subclass of: SO_0000673
so part of: PNAP_RS23880
location: 46149..46904
location: region:46149-46904:1
so has part: feature:46149-46904:1:exon

WP_011798447.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46149-46904:1:exon

PNAP_RS23885
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23885
old locus tag: Pnap_4661
so part of: sequence
location: 46901..47992
location: region:46901-47992:1
so has part: feature:46901-47992:1:exon
subclass of: SO_0000010

position:46901:1
position: 46901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47992:1
position: 47992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46901-47992:1:exon

PNAP_RS23885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23885
old locus tag: Pnap_4661
EC number: 3.4.22.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017876789.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cysteine protease StiP family protein
translation: MTFCGSYRPSDVTFLLKCLPQLPFVDVAHKEKLIQTGVRHYSEMLSPEALPSPRYLEVFRSACVANQQQMARDCLTLAALIAARRSGPITLVSLVRAGTPVGVILKHLLGQVMGREAAHYSVSIVRDRGIDAVALGHILKQGHAPESIVFVDGWTGKGVISRVLEQAMEDFNRQHEVSIDAGLYVLSDLAGTAACAASSLDYLIPSSILNATISGLVSRSVLNDSIGASDFHGCVYYDAFEAHDLSREFADGLVAEGIAQAQREGQPSPVPVDRARAAAISAEFLQSTTARHRITDVNLIKPGIGEATRVLLRRVPRLLILRDPSAPDVAHLKVLASEKSVPLMVDADLPYQAVSLIQSALDG
SIO_010081: PNAP_RS23885
subclass of: SO_0000673
so part of: PNAP_RS23885
location: 46901..47992
location: region:46901-47992:1
so has part: feature:46901-47992:1:exon

WP_011798448.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46901-47992:1:exon

PNAP_RS23890
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23890
old locus tag: Pnap_4662
so part of: sequence
location: 47985..48932
location: region:47985-48932:1
so has part: feature:47985-48932:1:exon
subclass of: SO_0000010

position:47985:1
position: 47985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48932:1
position: 48932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47985-48932:1:exon

PNAP_RS23890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23890
old locus tag: Pnap_4662
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011254701.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HpcH/HpaI aldolase/citrate lyase family protein
translation: MAEKKMLGASLYVPATHKDLSQIANGCLLGQVRSLIFCTEDAVADSELSYALFNLSLALQQMTPRPGTDRFVRVRNPDILKRVLQMPGSHKLSGFVLPKTTRHNFDAYFRQIRKTSHQLMPTLETAEVFDEAEMKLFRQCLEAPGVREHILALRIGGNDLLALLGIRRPRNMTIYRTPLGPVISRLVTTFLPYGFGLTAPVCEHLDNPALLAQEVQEDLAHGLVGKTAIHPSQVTLIEQHYRVHHSDMEVALRIMDRASPAVFKLHDSMCEVATHRTWAHGVVEQARVFGINPGDANASLSASILHLQQANPDKA
SIO_010081: PNAP_RS23890
subclass of: SO_0000673
so part of: PNAP_RS23890
location: 47985..48932
location: region:47985-48932:1
so has part: feature:47985-48932:1:exon

WP_011798449.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47985-48932:1:exon

PNAP_RS23895
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23895
old locus tag: Pnap_4663
so part of: sequence
location: 48935..50191
location: region:48935-50191:1
so has part: feature:48935-50191:1:exon
subclass of: SO_0000010

position:48935:1
position: 48935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50191:1
position: 50191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48935-50191:1:exon

PNAP_RS23895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23895
old locus tag: Pnap_4663
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017876791.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TerD family protein
translation: MTDFSRGQKGKLADMGCTGAFPLLLSLTSQGMDIDLSCFGLDAGGQLSDDRYMVFFNQKSCPGGGVTLDIGNGSATFTTDVSRLPESIHKLVFTASLNGEGTMRKLGASSLRLGSTTFSFSGADFQDEKAVIVGEIYKREGLWRFGAVGQGFNGGLSALLKHFGGTEAAASPAPAPALAAAPASAPASAPVPETQKVSLSKITLEKRGDKISLEKAGRQGFGRTRVNLNWNQSSTPAATEPKKQGFLSRAMGSVQTRSSGGIDLDLGCMFELTDGTPGCVQALGNSWGSFSLPPYIHLDSDDRSGTSTGGENIFINGDQFPQIKRALIFTFIYDGAPNWAATNGVVTIEVPGRSPVEVRLDNGSTASMCAIAMIENKSGNLEITKLVEYFQQVGLKSTHQQINDRFRFGLRFKAGSKD
SIO_010081: PNAP_RS23895
subclass of: SO_0000673
so part of: PNAP_RS23895
location: 48935..50191
location: region:48935-50191:1
so has part: feature:48935-50191:1:exon

WP_041377768.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48935-50191:1:exon

PNAP_RS23900
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23900
old locus tag: Pnap_4664
so part of: sequence
location: complement(50202..51701)
location: region:50202-51701:-1
so has part: feature:50202-51701:-1:exon
subclass of: SO_0000010

position:50202:-1
position: 50202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51701:-1
position: 51701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50202-51701:-1:exon

PNAP_RS23900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23900
old locus tag: Pnap_4664
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007043106.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: kinase
translation: MAKVVQCRTFDGQYVEYVDEIIGSGAMKDVYFSPDKSYVVAFFKTQQDAQAKDRLQMITGKYRETLFSQAGGDYWGNLFCWPSAALEHEGRLGLVAPTYPPHFFMEFGSKTDDSLGIKGKEKEGKWFTSASHRSRFMDPRELGDWLSYLKMGILISRAVKKMHMMGLAHSDLSYKNVLVDPAGGRACVIDVDGLVVPGKYPPDVVGTPDFIAPEVVMTSHLAKEDPQRKLPQRETDQHALAVLLYMYLLYRHPLRGGKVHDVDDDIRDESLSMGEKALFVEHPSDTSNRIKVADAKPAEFPWADTSKLPYTVTGPYLSPLFFQAFVTGLHEPSLRPSANDWETALIKTVDLIQPCHNKDCTQKWYVFDNSTKPCCPFCSTPYRGKLPVLNLYSSRQKDSYRPDNHRLMVWTGQSLFLWHVNNLISPNERLTQGQKKRVAYFVLHNATWWLVNEQLPDLMDVSMKTLIPMGGKVELKDGLQILLAKGEGGRLAVVQMVDA
SIO_010081: PNAP_RS23900
subclass of: SO_0000673
so part of: PNAP_RS23900
location: complement(50202..51701)
location: region:50202-51701:-1
so has part: feature:50202-51701:-1:exon

WP_011798451.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50202-51701:-1:exon

PNAP_RS23905
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23905
old locus tag: Pnap_4665
so part of: sequence
location: complement(51798..53528)
location: region:51798-53528:-1
so has part: feature:51798-53528:-1:exon
subclass of: SO_0000010

position:51798:-1
position: 51798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53528:-1
position: 53528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51798-53528:-1:exon

PNAP_RS23905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23905
old locus tag: Pnap_4665
EC number: 3.1.3.16
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014779253.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PP2C family serine/threonine-protein phosphatase
translation: MPASNERHQQLDAFINAFFSLGKAASKGIDSLADAGETAAPAYIIAFMQSREVLEITEKYLCDLRAMWLCSEDAQPALVDKKEASIAPAELPQPDPECLSPQAFSAKSENSLEHISLPPPSSVVQPFSIPSPILPLAVEAAFPVSPTASSLKPVSAPTQPEGSAPIHQTMRPGHIPATNTPLGKPADPRISFHLPNAKAGQPYAGKLEGKDPSGKAVMILDARANTATGLSFDAQSCELRGMPAVAGDCKVEVRWTLGGSTEYTSECCLFVNPDPRSLWKQIDPPADDPYFKPNIDATLIAGLDFKIAAASRRGRSHEHVGSFRDDDFFVHHDSSSGWSVLMVADGAGSAKSSRWGSKLAVAAAGNHIASKLSGAFGAEMTQALAGWSTDMTAASKAMHTPFYLLFQEASKLAVESIEQEAKLQGVPPKEYATTLLAAAVQRDGNDTFLATFWMGDGAIAAYGPRSKVRLMGMPDSGEFAGQTRFLDSAALTDQGFGKRLVLGRYSDLTAVVLMTDGISDPRFETDNGLADAAKWDGLWDEINLLLAAHEPEKALLEWLHFFTPGHHDDRTIAVLW
SIO_010081: PNAP_RS23905
subclass of: SO_0000673
so part of: PNAP_RS23905
location: complement(51798..53528)
location: region:51798-53528:-1
so has part: feature:51798-53528:-1:exon

WP_011798452.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51798-53528:-1:exon

PNAP_RS23910
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23910
old locus tag: Pnap_4666
so part of: sequence
location: complement(53531..54583)
location: region:53531-54583:-1
so has part: feature:53531-54583:-1:exon
subclass of: SO_0000010

position:53531:-1
position: 53531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54583:-1
position: 54583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53531-54583:-1:exon

PNAP_RS23910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23910
old locus tag: Pnap_4666
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001253653.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TerY-C metal binding domain-containing protein
translation: MRRLPVFFVLDCSESMVGANLKKMEGAVAAIVKSLRTDPQALETVFFSVIAFAGVARTIAPLVEIVSFYPPKLPLGGGTNLGSALDALMGEIDRSVIKTTAERKGDWRPIIYLVTDGRPTDNPSRAIERWNSHYAKKATLIAIGLGRSVDFTALRRLTENVISFEDIKESDFKKFINWVTASVVVQSKSVGDGTDFQGLRILDKSVMKIIMEPPSTIADETVVTLIGRCQKTSRPYIIKYEQAMQDVVMKDFKVQVSRYEIAGCYPLEEDYFEWSDPRTVDLKVNTSELFGAPGCPHCGAHTAFAVCGCGKLLCLNDAASVVCPWCQKTVSFSSLGPDDEGGFEVRRGRG
SIO_010081: PNAP_RS23910
subclass of: SO_0000673
so part of: PNAP_RS23910
location: complement(53531..54583)
location: region:53531-54583:-1
so has part: feature:53531-54583:-1:exon

WP_011798453.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53531-54583:-1:exon

PNAP_RS23915
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23915
old locus tag: Pnap_4667
so part of: sequence
location: complement(54668..55309)
location: region:54668-55309:-1
so has part: feature:54668-55309:-1:exon
subclass of: SO_0000010

position:54668:-1
position: 54668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55309:-1
position: 55309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54668-55309:-1:exon

PNAP_RS23915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23915
old locus tag: Pnap_4667
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014779255.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VWA domain-containing protein
translation: MSTRRLPVYILLDTSGSMRGEPIHSVNVGLQAMLSTLRQDPYALESVHLSIITFDTEARVLLVLTPLDQVSLASIDIPNSGATFMGAALNLLNACVDREVRKSTVDTKGDWRPLVFLMTDGSPSDMHAFREAIPEVKRRNFGTVVACAAGPKAKQVHLLELTDRVVTMDTMDAAAFSGFFKWVSASVAIGSSSAGLSGQVSLPPPPPEVQLVF
SIO_010081: PNAP_RS23915
subclass of: SO_0000673
so part of: PNAP_RS23915
location: complement(54668..55309)
location: region:54668-55309:-1
so has part: feature:54668-55309:-1:exon

WP_011798454.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54668-55309:-1:exon

PNAP_RS23920
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23920
old locus tag: Pnap_4668
so part of: sequence
location: complement(55316..55957)
location: region:55316-55957:-1
so has part: feature:55316-55957:-1:exon
subclass of: SO_0000010

position:55316:-1
position: 55316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55957:-1
position: 55957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55316-55957:-1:exon

PNAP_RS23920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23920
old locus tag: Pnap_4668
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016540375.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TerD family protein
translation: MAVSLKKGHGISLKKNENDLSMVTIGLGWDIQEKKKGFLGGMFGPKEEEYDLDVVAFLCGADGKVQNLGRDSGGNATLMNGDIVFFNNMHHNSGQIWLTGDNRTGAGDGDDEQIIVKLNDLPQQYAKVVFVVQIYKGLENQQSFGMVKNAFIRAVDGKKREMVRFDLSGGAPYENCRSMLFAEMVRETDGWKFNALGTPSPSDSFVEWLKKFA
SIO_010081: PNAP_RS23920
subclass of: SO_0000673
so part of: PNAP_RS23920
location: complement(55316..55957)
location: region:55316-55957:-1
so has part: feature:55316-55957:-1:exon

WP_011798455.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55316-55957:-1:exon

PNAP_RS23925
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23925
old locus tag: Pnap_4669
so part of: sequence
location: complement(55970..56608)
location: region:55970-56608:-1
so has part: feature:55970-56608:-1:exon
subclass of: SO_0000010

position:55970:-1
position: 55970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56608:-1
position: 56608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55970-56608:-1:exon

PNAP_RS23925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23925
old locus tag: Pnap_4669
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015731191.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VWA domain-containing protein
translation: MRRLPVYLLVDTSGSMSGEPIEAVKNGVQVLVSTLRQDPYALETAFLSIITFDSEARQVVPLTELANFQIPAIVATGTTALGSALSLLADKIEMEVGRTTAEVKGDWKPIVFIMTDGSPTDDWKKGLERLKTVRTGMVIACAAGPGADTTVLKQITEIVVQLNTADASTIKAFFKWVSASVSSGSQKIDLAKKEVTGLSDLPPPPPEVNVVL
SIO_010081: PNAP_RS23925
subclass of: SO_0000673
so part of: PNAP_RS23925
location: complement(55970..56608)
location: region:55970-56608:-1
so has part: feature:55970-56608:-1:exon

WP_011798456.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55970-56608:-1:exon

PNAP_RS26500
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS26500
old locus tag: Pnap_4670
so part of: sequence
location: complement(56855..57163)
location: region:56855-57163:-1
so has part: feature:56855-57163:-1:exon
subclass of: SO_0000010

position:56855:-1
position: 56855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57163:-1
position: 57163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56855-57163:-1:exon

PNAP_RS26500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS26500
old locus tag: Pnap_4670
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPIFDTKSSTLSLIASGNFISILSPWRINVDLIQKRISVKKKNWYLIGEDEDLFGIGSVRNIKIDELLFGANIYIKVIGSGTIKCFCIPKCDAKKIRNMLFP
SIO_010081: PNAP_RS26500
subclass of: SO_0000673
so part of: PNAP_RS26500
location: complement(56855..57163)
location: region:56855-57163:-1
so has part: feature:56855-57163:-1:exon

WP_011798457.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56855-57163:-1:exon

PNAP_RS23930
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23930
old locus tag: Pnap_4671
so part of: sequence
location: complement(57275..57910)
location: region:57275-57910:-1
so has part: feature:57275-57910:-1:exon
subclass of: SO_0000010

position:57275:-1
position: 57275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57910:-1
position: 57910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57275-57910:-1:exon

PNAP_RS23930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23930
old locus tag: Pnap_4671
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020583056.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF799 family lipoprotein
translation: MRVFLCALVSVFLMGCVTQPTKKDMSAFQAAAPRSILVVPTINKSLDVDAPNYVLAALPVPIAEKGYYVFPVNTTKYVLEQEGYYEGERIHQQSTPTLAKLFDADAVLYVSINRWDAQFALLTTVVTVEFDYRLVSKDGTELWKENKRMQYQPQSNNAGHPLATLIVAVVNAAVTRAAPNYMPLTQQANQQVFILGPDAIPDGPYRPTAAR
SIO_010081: PNAP_RS23930
subclass of: SO_0000673
so part of: PNAP_RS23930
location: complement(57275..57910)
location: region:57275-57910:-1
so has part: feature:57275-57910:-1:exon

WP_011798458.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57275-57910:-1:exon

PNAP_RS23935
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23935
old locus tag: Pnap_4672
so part of: sequence
location: complement(57907..58269)
location: region:57907-58269:-1
so has part: feature:57907-58269:-1:exon
subclass of: SO_0000010

position:57907:-1
position: 57907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58269:-1
position: 58269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57907-58269:-1:exon

PNAP_RS23935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23935
old locus tag: Pnap_4672
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010451562.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4810 domain-containing protein
translation: MRYLSILPIAALLAGCAAPSLYQWGGYDQALYAGYKDPAKMETLRVQLEKHIATMETSKQKVAPGLYAELGTLYLQSGASDKAIALYSQERAAWPESKGLMTAMIQNLERRQQAKVEAAK
SIO_010081: PNAP_RS23935
subclass of: SO_0000673
so part of: PNAP_RS23935
location: complement(57907..58269)
location: region:57907-58269:-1
so has part: feature:57907-58269:-1:exon

WP_011798459.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57907-58269:-1:exon

PNAP_RS23940
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23940
old locus tag: Pnap_4673
so part of: sequence
location: complement(58280..58612)
location: region:58280-58612:-1
so has part: feature:58280-58612:-1:exon
subclass of: SO_0000010

position:58280:-1
position: 58280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58612:-1
position: 58612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58280-58612:-1:exon

PNAP_RS23940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23940
old locus tag: Pnap_4673
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKTIMTLSMAAGLGGMLTLSACTQMPTEKQSISDMRPQISFKAPDEQTRSARVILDGLDMGPVGSYLEGAASLRILSGTHLLSIASGNQVIFQEKFYAGDGVNRTFIVN
SIO_010081: PNAP_RS23940
subclass of: SO_0000673
so part of: PNAP_RS23940
location: complement(58280..58612)
location: region:58280-58612:-1
so has part: feature:58280-58612:-1:exon

WP_011798460.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58280-58612:-1:exon

PNAP_RS23945
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23945
old locus tag: Pnap_4674
so part of: sequence
location: complement(58612..59580)
location: region:58612-59580:-1
so has part: feature:58612-59580:-1:exon
subclass of: SO_0000010

position:59580:-1
position: 59580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58612-59580:-1:exon

PNAP_RS23945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23945
old locus tag: Pnap_4674
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020583053.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CsgG/HfaB family protein
translation: MTKPLLIILAAGLTACAVQAPPVAQKDAPQSLATQKAAQQAVASQAPATPTLKRKIALGRITNETSYGQSLLRDRHDDPLGKQVTDLMSKALTESGAYLVFERPDIGRIQAEGRLTDTKLNIVGVDALIIGSLTEFGRKAIGATGFVSSSKRQVAFAKVDIRVVDVNTGHVFFATSGAGEASTETASTFGFGSQAGYDGTLNDAAIRQAVAEAINRLSVEMSGRPWQTYLLKVDGYRVFIGGGKSQGVKPGMQFSVQTQGEQVKSPQTGAMVTLPGQAIAQIRVDALFGDSELNEGAVASIASGSLAGYKPEQLLIRFEGAK
SIO_010081: PNAP_RS23945
subclass of: SO_0000673
so part of: PNAP_RS23945
location: complement(58612..59580)
location: region:58612-59580:-1
so has part: feature:58612-59580:-1:exon

WP_041377770.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58612-59580:-1:exon

PNAP_RS23950
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23950
old locus tag: Pnap_4675
so part of: sequence
location: complement(59744..60301)
location: region:59744-60301:-1
so has part: feature:59744-60301:-1:exon
subclass of: SO_0000010

position:59744:-1
position: 59744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60301:-1
position: 60301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59744-60301:-1:exon

PNAP_RS23950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23950
old locus tag: Pnap_4675
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008346350.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNTTQLRLQALMVAATMVLFVAMLAINEWLFTRFEFARGINWIYLPAGIRLLSTLLFAEAGAIGLLLVSWLVCFFYFFPDDPVRSFAGGILAALGPYLVYRGAQHRYGLHASLATLTPQRLLLLIVAYSVASPLLMHLWFALQGKEGLLQGFLVMFIGDLSGTLLVIYTVKAALSFIPTPPTSLR
SIO_010081: PNAP_RS23950
subclass of: SO_0000673
so part of: PNAP_RS23950
location: complement(59744..60301)
location: region:59744-60301:-1
so has part: feature:59744-60301:-1:exon

WP_049763843.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59744-60301:-1:exon

PNAP_RS23955
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23955
old locus tag: Pnap_4676
so part of: sequence
location: 60390..60749
location: region:60390-60749:1
so has part: feature:60390-60749:1:exon
subclass of: SO_0000010

position:60390:1
position: 60390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60749:1
position: 60749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60390-60749:1:exon

PNAP_RS23955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23955
old locus tag: Pnap_4676
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003078963.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKKIKSSDVYLRFLHLAEAIRGLPSLPPLDPLEERILALVARSGEQEERLCVRDMMAKEQLGAPATIHTRLKSMRTKGWIMLSDTEDARRKQIELTQEAVRYFERLSRCMLQAAKDSV
SIO_010081: PNAP_RS23955
subclass of: SO_0000673
so part of: PNAP_RS23955
location: 60390..60749
location: region:60390-60749:1
so has part: feature:60390-60749:1:exon

WP_011798463.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60390-60749:1:exon

PNAP_RS28090
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS28090
old locus tag: Pnap_4677
so part of: sequence
location: complement(60764..61246)
location: region:60764-61246:-1
so has part: feature:60764-61246:-1:exon
subclass of: SO_0000010

position:60764:-1
position: 60764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61246:-1
position: 61246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60764-61246:-1:exon

PNAP_RS28090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS28090
old locus tag: Pnap_4677
inference: COORDINATES: protein motif:HMM:NF033580.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MDSTVVRAHACAAGAAASNATAEALGRSRGGFGCKIHALTNALGLPVRFILTGGQAADVTQAIPLMTDIGSTGALLADKGYDANALLDWLGQRDIAAVIPPKANRKMQRSCDWYQYKERHVIECMFGKLKYFRRIATRYEKKASHFMEMLAFSAVLLWLR
SIO_010081: PNAP_RS28090
subclass of: SO_0000673
so part of: PNAP_RS28090
location: complement(60764..61246)
location: region:60764-61246:-1
so has part: feature:60764-61246:-1:exon

WP_083758110.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60764-61246:-1:exon

PNAP_RS28095
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS28095
old locus tag: Pnap_4678
so part of: sequence
location: complement(61263..61523)
location: region:61263-61523:-1
so has part: feature:61263-61523:-1:exon
subclass of: SO_0000010

position:61263:-1
position: 61263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61523:-1
position: 61523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61263-61523:-1:exon

PNAP_RS28095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS28095
old locus tag: Pnap_4678
inference: COORDINATES: protein motif:HMM:NF024736.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MDKSKLSDGEWVHLIGRLKKTPGIRVGCEATCRRFVEAVLWILRAGAQWRLLAGRLGHWNSVFKRFACLMPVWSLGQDAGPCISQG
SIO_010081: PNAP_RS28095
subclass of: SO_0000673
so part of: PNAP_RS28095
location: complement(61263..61523)
location: region:61263-61523:-1
so has part: feature:61263-61523:-1:exon

WP_157040550.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61263-61523:-1:exon

PNAP_RS23965
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23965
old locus tag: Pnap_4679
so part of: sequence
location: 61667..61933
location: region:61667-61933:1
so has part: feature:61667-61933:1:exon
subclass of: SO_0000010

position:61667:1
position: 61667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61933:1
position: 61933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61667-61933:1:exon

PNAP_RS23965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23965
old locus tag: Pnap_4679
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008063804.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTHHAQVRSRQRAIPGLLIDLLLQFGVSERAGNGASKVFFDKTARRRVQAYAEPLASLLEDHLDLYVVVAADSSVITVGHRLEKIRRH
SIO_010081: PNAP_RS23965
subclass of: SO_0000673
so part of: PNAP_RS23965
location: 61667..61933
location: region:61667-61933:1
so has part: feature:61667-61933:1:exon

WP_011798465.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61667-61933:1:exon

PNAP_RS27450
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS27450
so part of: sequence
location: 62032..62190
location: region:62032-62190:1
so has part: feature:62032-62190:1:exon
subclass of: SO_0000010

position:62032:1
position: 62032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62190:1
position: 62190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62032-62190:1:exon

PNAP_RS27450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS27450
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLTSAELDGAPSLNAKLRIAQDAPLEVCYAPFDYIITPLPKFFCILTMCVDA
SIO_010081: PNAP_RS27450
subclass of: SO_0000673
so part of: PNAP_RS27450
location: 62032..62190
location: region:62032-62190:1
so has part: feature:62032-62190:1:exon

WP_157040551.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62032-62190:1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 365044
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF01725
inference: COORDINATES: profile:INFERNAL:1.1.1
note: SAM-I-IV-variant riboswitch; SAM riboswitches modulate the expression of downstream genes in response to levels of S-adenosylmethionine; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: S-adenosylmethionine
so part of: sequence
location: 62361..62468
location: region:62361-62468:1
so has part: feature:62361-62468:1:region

position:62361:1
position: 62361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62468:1
position: 62468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62361-62468:1:region

PNAP_RS23970
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23970
old locus tag: Pnap_4680
so part of: sequence
location: 62500..62937
location: region:62500-62937:1
so has part: feature:62500-62937:1:exon
subclass of: SO_0000010

position:62500:1
position: 62500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62937:1
position: 62937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62500-62937:1:exon

PNAP_RS23970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23970
old locus tag: Pnap_4680
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020204185.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3293 domain-containing protein
translation: MPESAISPSLIQAYLAADYRVDAELPFTLKVGVFSEPLAHLLQRHQSDCAAYLTACNPLGRDVGDIENAARQAELSRELKGRSLRFIDGVGLDSQSEETQKWPGEVSFLVLGLSLEASRALGRKHEQNALIWCGKDAVPQLVLLR
SIO_010081: PNAP_RS23970
subclass of: SO_0000673
so part of: PNAP_RS23970
location: 62500..62937
location: region:62500-62937:1
so has part: feature:62500-62937:1:exon

WP_232290870.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62500-62937:1:exon

PNAP_RS27455
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS27455
so part of: sequence
location: 63050..63277
location: region:63050-63277:1
so has part: feature:63050-63277:1:exon
subclass of: SO_0000010

position:63050:1
position: 63050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63277:1
position: 63277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63050-63277:1:exon

PNAP_RS27455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS27455
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVAIARSSASTRIQQILLTTAHHFEIRALPDPQLALPDGEFRDPLRFRWSETPRLPVRRQPDAICSTLSAGMIPG
SIO_010081: PNAP_RS27455
subclass of: SO_0000673
so part of: PNAP_RS27455
location: 63050..63277
location: region:63050-63277:1
so has part: feature:63050-63277:1:exon

WP_157040552.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63050-63277:1:exon

PNAP_RS23975
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23975
old locus tag: Pnap_4681
so part of: sequence
location: 63330..63785
location: region:63330-63785:1
so has part: feature:63330-63785:1:exon
subclass of: SO_0000010

position:63330:1
position: 63330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63785:1
position: 63785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63330-63785:1:exon

PNAP_RS23975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23975
old locus tag: Pnap_4681
inference: COORDINATES: protein motif:HMM:NF022182.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YbjN domain-containing protein
translation: MSILIEEKDVTAVNLAVELEQAVIGHVLDEDKSIYVTEDGWFPFWIRIQESAGYVTFKTYTNFKKSTSHLQRLELCNELNAKNYLVTSCVKDDHLLFDYILNYRDGLLRETFIRSCRQFARNLEKGLELVDPENDFVLPPGKIEPEDEETP
SIO_010081: PNAP_RS23975
subclass of: SO_0000673
so part of: PNAP_RS23975
location: 63330..63785
location: region:63330-63785:1
so has part: feature:63330-63785:1:exon

WP_011798467.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63330-63785:1:exon

PNAP_RS23980
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23980
old locus tag: Pnap_4682
so part of: sequence
location: 63782..64255
location: region:63782-64255:1
so has part: feature:63782-64255:1:exon
subclass of: SO_0000010

position:63782:1
position: 63782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64255:1
position: 64255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63782-64255:1:exon

PNAP_RS23980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23980
old locus tag: Pnap_4682
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798469.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKAVHLEYYAKNLCFDPKPMSNDDPDRTKLLKAIALLERADKCKNKRNAEKLNAQALTAIMPLELEIHGRSILDDLPSRVLFTDENSDVSMQASGGGLRMSYSIRFSARIDSDVTEDTYEEYLGDNAWQWVGIRFASSGYEGDSGSSMSYSIRDDE
SIO_010081: PNAP_RS23980
subclass of: SO_0000673
so part of: PNAP_RS23980
location: 63782..64255
location: region:63782-64255:1
so has part: feature:63782-64255:1:exon

WP_011798468.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63782-64255:1:exon

PNAP_RS28200
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS28200
so part of: sequence
location: 64248..64382
location: region:64248-64382:1
so has part: feature:64248-64382:1:exon
subclass of: SO_0000010

position:64248:1
position: 64248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64382:1
position: 64382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64248-64382:1:exon

PNAP_RS28200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS28200
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNESNHVIDQAMQHNQRGHALGALLSRPVDADSSPETLEYGQSG
SIO_010081: PNAP_RS28200
subclass of: SO_0000673
so part of: PNAP_RS28200
location: 64248..64382
location: region:64248-64382:1
so has part: feature:64248-64382:1:exon

WP_269667382.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64248-64382:1:exon

PNAP_RS23985
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23985
old locus tag: Pnap_4683
so part of: sequence
location: 64442..64915
location: region:64442-64915:1
so has part: feature:64442-64915:1:exon
subclass of: SO_0000010

position:64442:1
position: 64442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64915:1
position: 64915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64442-64915:1:exon

PNAP_RS23985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23985
old locus tag: Pnap_4683
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798468.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTKVINLEYYAKKFCFDPKQMSADDPDRAKLVKAIALLKKAAKCKDELEAEKLNAQALAAIMPLKLQIEGGDLLEDLPSSVLFTDENSDVSMQASGGGLRMTYSVRFSARIDSEATEDNYEDYLGENGWGWVGIDFASDGYECDNGSTMSVSIDDDE
SIO_010081: PNAP_RS23985
subclass of: SO_0000673
so part of: PNAP_RS23985
location: 64442..64915
location: region:64442-64915:1
so has part: feature:64442-64915:1:exon

WP_011798469.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64442-64915:1:exon

PNAP_RS23990
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23990
old locus tag: Pnap_4684
so part of: sequence
location: 64908..65852
location: region:64908-65852:1
so has part: feature:64908-65852:1:exon
subclass of: SO_0000010

position:64908:1
position: 64908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65852:1
position: 65852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64908-65852:1:exon

PNAP_RS23990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23990
old locus tag: Pnap_4684
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017285749.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ADP-ribosylglycohydrolase family protein
translation: MSESAQGISPTQQQSRFDRARGALLGLAVGDAIGTTVEFKPRGSFAPLTDMVGGGPFQLLPGQWTDDTSMALCLAASLLENGFDLHDQMQRYVRWHDEGYMSSNGRCFDIGMATSSALERFRRTGNPVAGSRKPDSAGNGSIMRLAPVPIHYLQTPEQAIEMSAAQSTTTHQAPECLAACRLLAEVMVRALQGNSKDDLLAPLRQTLPMSSALQSIARGDYQTKSEDQIRGSGYVVQSLEAALWCFSRTDSFAACVLLAANLGDDADTTAAVAGQLAGAFYGESGIPAPWLRKLAMAGDIGQWAEQLLLQKPKG
SIO_010081: PNAP_RS23990
subclass of: SO_0000673
so part of: PNAP_RS23990
location: 64908..65852
location: region:64908-65852:1
so has part: feature:64908-65852:1:exon

WP_011798470.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64908-65852:1:exon

PNAP_RS23995
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23995
old locus tag: Pnap_4685
so part of: sequence
location: 65962..66531
location: region:65962-66531:1
so has part: feature:65962-66531:1:exon
subclass of: SO_0000010

position:65962:1
position: 65962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66531:1
position: 66531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65962-66531:1:exon

PNAP_RS23995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23995
old locus tag: Pnap_4685
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004513537.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YqiA/YcfP family alpha/beta fold hydrolase
translation: MKNVLAVFSHGKESGPLGSKIRALMRVAERQGAQTLSVNYREHPDGTAIDHDASGEADRRVAQLLATSLPAHDRLVLVGSSMGGYVATVASEHLKPDALFLLAPAFYLLGYACQDPVPYATSTLVVHSWGDDVVPPDNSIGFARQHRCALHLLDGDHRLDAALPAIEPLFGLFLEDILAADSAPPASAR
SIO_010081: PNAP_RS23995
subclass of: SO_0000673
so part of: PNAP_RS23995
location: 65962..66531
location: region:65962-66531:1
so has part: feature:65962-66531:1:exon

WP_011798471.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65962-66531:1:exon

PNAP_RS24000
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24000
old locus tag: Pnap_4686
so part of: sequence
location: complement(66643..67548)
location: region:66643-67548:-1
so has part: feature:66643-67548:-1:exon
subclass of: SO_0000010

position:66643:-1
position: 66643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67548:-1
position: 67548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66643-67548:-1:exon

PNAP_RS24000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24000
old locus tag: Pnap_4686
inference: COORDINATES: protein motif:HMM:NF017437.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TniB family NTP-binding protein
translation: MTPNLDHLHTGVWSFLEDSTEERVTRLYSPKWVAYARGNEALARMGHLLNHPPSGRMPCMLLHGDSNIGKNMIVEKFLRDNPNVCNDLNEVEVRRGVHLQMPAKPSDDKLYAQIVEGLGIQAPINRRGVDMELLGLRLLHRQPPKMMIIDEVHHLLAGTVREQRQLLNQLKFISNELRIPIVALGTNEALYAMQTDPQIASRFEPFALPKWRESNEFRAFVVSFGRLLPLEKPSPLADKDIIQKLMSLSAGLTGKVTTLLVQAAELAIRQKTECITLDLIEQAAASGIYKYLPVGLEAESF
SIO_010081: PNAP_RS24000
subclass of: SO_0000673
so part of: PNAP_RS24000
location: complement(66643..67548)
location: region:66643-67548:-1
so has part: feature:66643-67548:-1:exon

WP_011798472.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66643-67548:-1:exon

PNAP_RS25320
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS25320
old locus tag: Pnap_4687
so part of: sequence
location: complement(67549..68106)
location: region:67549-68106:-1
so has part: feature:67549-68106:-1:exon
subclass of: SO_0000010

position:67549:-1
position: 67549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68106:-1
position: 68106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67549-68106:-1:exon

PNAP_RS25320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS25320
old locus tag: Pnap_4687
inference: COORDINATES: protein motif:HMM:NF020859.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Mu transposase C-terminal domain-containing protein
translation: MAAWQTAANADDAIPRSLPHHPDQFTISFLPFLQRKLRRDGLHVFNIRYWDNVLPAIVQLGAPLTVRYDPRNLSRIYVVGPDKRYYPVPYADLSLPPITLWEQRAAVAYLRGDGDNAPAQAAIFKAVVAQRALIANATAKTKAARRQSQRQSNAEFATMDRSRLGESAVDYSEPVLPSDAEVWDD
SIO_010081: PNAP_RS25320
subclass of: SO_0000673
so part of: PNAP_RS25320
location: complement(67549..68106)
location: region:67549-68106:-1
so has part: feature:67549-68106:-1:exon

WP_049763845.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67549-68106:-1:exon

PNAP_RS25325
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS25325
old locus tag: Pnap_4688
so part of: sequence
location: complement(68146..69357)
location: region:68146-69357:-1
so has part: feature:68146-69357:-1:exon
subclass of: SO_0000010

position:68146:-1
position: 68146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69357:-1
position: 69357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68146-69357:-1:exon

PNAP_RS25325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS25325
old locus tag: Pnap_4688
inference: COORDINATES: protein motif:HMM:NF012870.2
GO process: GO:0015074 - DNA integration [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DDE-type integrase/transposase/recombinase
translation: MRQLSVVPDAVAVCANRLVAIVRIQSDGKVAIRDLANGQLLTTSAVELSAPPIASGLSAASATALNEATDSQWEDARRRESAVIAILKTNDVAQHVSRVAVEFGVSRRTVFRWLAVYRETPQTSALLHRPMGPPVGGRRIDAHLERLITDVINDVYLTKVRAKKEEVVRMVHLRCAAQGLKPPSRKPILARLKALDTREVAKARLQPGEAASLTDFVPGRYRVNQPLGVVQIDHTLVDLIVVDEARRLPIGRPWLTLAVDVATRVIVGFYLSLEAPSSTSVALCLSHATLPKELWLKQRGLNCNWPVWGLPQAVHADNGADFTAAALRRGCDEHGIRLILRPVATPHYGGHIERLIGTLMGRVHLLPGTTGSNPQDKGDYPSEAQARMTLNELEQWLTLEICE
SIO_010081: PNAP_RS25325
subclass of: SO_0000673
so part of: PNAP_RS25325
location: complement(68146..69357)
location: region:68146-69357:-1
so has part: feature:68146-69357:-1:exon

WP_049763846.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68146-69357:-1:exon

PNAP_RS24010
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24010
old locus tag: Pnap_4689
so part of: sequence
location: 69633..70439
location: region:69633-70439:1
so has part: feature:69633-70439:1:exon
subclass of: SO_0000010

position:69633:1
position: 69633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70439:1
position: 70439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69633-70439:1:exon

PNAP_RS24010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24010
old locus tag: Pnap_4689
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSALPYEVLCELCLPYPQQLVVSEHLWSFQDRDPFEFVTGPLIPCVAAHYRNENLLAQSLSHHLGMLASTPCAPRYFAGVANHDSLPCPADVAECLLTAFVLLPGSVPFLYSGTEWDCAVATNLEFGSFELAQEVPAQGLLLFNHRPVTVDESRLTAFTAFWSVLLQLRRSLGTAVMPASSLQQVRRSGALVRFSVGAVEIVVNTGAEPARTDASNDSFGFMLGTRDFSFDGFQLTLAPRSTVVITPAECQLPTGMSDAFRCLKGFS
SIO_010081: PNAP_RS24010
subclass of: SO_0000673
so part of: PNAP_RS24010
location: 69633..70439
location: region:69633-70439:1
so has part: feature:69633-70439:1:exon

WP_011798475.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69633-70439:1:exon

PNAP_RS24015
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24015
old locus tag: Pnap_4690
so part of: sequence
location: complement(70526..70747)
location: region:70526-70747:-1
so has part: feature:70526-70747:-1:exon
subclass of: SO_0000010

position:70526:-1
position: 70526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70747:-1
position: 70747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70526-70747:-1:exon

PNAP_RS24015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24015
old locus tag: Pnap_4690
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004337858.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YdcH family protein
translation: MFPEYRDLITQLKTTDHHFTRLFDQHNALDQQIQNMESRIEAATPEEIETLKKEKLQLKDQLYTLLMQADAPA
SIO_010081: PNAP_RS24015
subclass of: SO_0000673
so part of: PNAP_RS24015
location: complement(70526..70747)
location: region:70526-70747:-1
so has part: feature:70526-70747:-1:exon

WP_011798476.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70526-70747:-1:exon

PNAP_RS24020
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24020
old locus tag: Pnap_4691
so part of: sequence
location: 71222..73051
location: region:71222-73051:1
so has part: feature:71222-73051:1:exon
subclass of: SO_0000010

position:71222:1
position: 71222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73051:1
position: 73051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71222-73051:1:exon

PNAP_RS24020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24020
old locus tag: Pnap_4691
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798216.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MSNTPSSTLLNTRFVRRLGPHHFAHLRACAEGLAIADCARRYLGVEHGHEAITAHRQAVDAVRAVARRRGESAWRLVGLTIRTQAGSARPDLDEFAAAQGLEAFSESEVVKLYAEAFAADRKTARSQRLRERQLALLRRLEGLAAETPQPGDLVAGWFDGVLAAKLVTAGILTLGDLNARVSAGGRWFASLPAVGVAKARGIERHLATLLPRDVQPPRLLFALSRAPALFDAPSPSGASGARAASPSGERVLDDRSQAALARSLLDAGSDLEAVQRWIQARAGSLATATLYRREAHRLLLWLQYERGENGRGATLAQMGVAECSAFMAFLQHIPPRWISRVRAAPGQPGWAPFRGQLSHRSCRQSITIIASLFAWLQSARYLAANPWVLVNQATGDDPGHKMLDTKALSEAAMAEVLRFIDAQAPSPSRARMRFIVRFVEAVGLRSAELLSARLGDLRMEPEGWVMQVHGKGAKNRIAAVPGQALHALEDYLLARGLGSIQAAAPSAPLLAATQDAMAPIGYQALYEHVRGWLAKAVRASSLPANERDRLAGATTHWLRHTFGTRAIARQVPLDVIQAQMGHASIQTTTAIYGRAPIRRRVDELGKAFG
SIO_010081: PNAP_RS24020
subclass of: SO_0000673
so part of: PNAP_RS24020
location: 71222..73051
location: region:71222-73051:1
so has part: feature:71222-73051:1:exon

WP_011798477.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71222-73051:1:exon

PNAP_RS25330
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS25330
old locus tag: Pnap_4692
so part of: sequence
location: complement(73475..74461)
location: region:73475-74461:-1
so has part: feature:73475-74461:-1:exon
subclass of: SO_0000010

position:73475:-1
position: 73475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74461:-1
position: 74461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73475-74461:-1:exon

PNAP_RS25330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS25330
old locus tag: Pnap_4692
inference: COORDINATES: protein motif:HMM:TIGR00180.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB/RepB/Spo0J family partition protein
translation: MSKLSEKFAAGKKALAERQSAEAKDSTSPPSSFARAAGPLHGSVSTMKIDLLKAEIDALKAAKPVMKIHPSEIKASAWVNRHQDSFEVPEFAAFKAEIESAAGNIQPIKVRPLKSADTSGGAKYEIVFGHRRHRACLELGIEVNVIVDDIDEKTMFVEMDRENRERADLRPFEQGLMYARALDSGLFSSLRKLSEEIGADPTNISKAVSLARLPEPILDSFESRLDIQYRWASDLKAALEKEPELILARAADIKKQRSSGNHLSSQSAFNLLVGKVSSSSKPVARKVTVGKRVLTITERDKMITYEFDTLGREKLSKIEKFIASVMAE
SIO_010081: PNAP_RS25330
subclass of: SO_0000673
so part of: PNAP_RS25330
location: complement(73475..74461)
location: region:73475-74461:-1
so has part: feature:73475-74461:-1:exon

WP_049763847.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73475-74461:-1:exon

PNAP_RS24030
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24030
old locus tag: Pnap_4693
so part of: sequence
location: complement(74464..75657)
location: region:74464-75657:-1
so has part: feature:74464-75657:-1:exon
subclass of: SO_0000010

position:74464:-1
position: 74464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75657:-1
position: 75657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74464-75657:-1:exon

PNAP_RS24030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24030
old locus tag: Pnap_4693
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012406360.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MANTSNISPRPSVSIAELAAMRTRAHEVVSQNRAAAAAPSAQKVPPEFNSAQVAELCGIDRNKLEHRRRKGGLPDGREEARRRMFTLKEAQEWVLEYRHSKSKRGCIAAGQMPKAVVIAAGNFKGGVGKSTTAATLAQGLSLRGHKVLVIDTDPQGSLTSLMGVAPETLEDEDTILNVASGDAQTLADAIRPTYWSNIHLIGAAPRISGAQFHLPARAQKDGVKFWSVLSNGLDEDILDLYDVVIIDTPPALDYLTINAFYAADILMVPLPPSAMDFVSSTQFWDLFVDLNEEFAEYGMQKEYSFVNVLLSRVDANDTAAALVREWITEAYGKHLLPIEIPSTAAAKTAAAEFGTVYDATVAQQSARTYRRAYEAYERLIEITEDQLVRVWQSQGKE
SIO_010081: PNAP_RS24030
subclass of: SO_0000673
so part of: PNAP_RS24030
location: complement(74464..75657)
location: region:74464-75657:-1
so has part: feature:74464-75657:-1:exon

WP_011798479.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74464-75657:-1:exon

PNAP_RS24035
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24035
old locus tag: Pnap_4694
so part of: sequence
location: 76189..77499
location: region:76189-77499:1
so has part: feature:76189-77499:1:exon
subclass of: SO_0000010

position:76189:1
position: 76189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77499:1
position: 77499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76189-77499:1:exon

PNAP_RS24035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24035
old locus tag: Pnap_4694
inference: COORDINATES: protein motif:HMM:NF013235.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MKSVSTLNKPNVSLVMIPKAGKLTAIERKLLNSILLSSARQLREYRALHSQDPSNTHLYSALADELLDPVEVGKSNLKSALRKHVLALRRAVINWEAPDAKSGVVWENLSMLSEARFEIRNGGLYVLWALPPKINEALSDYQEFHFTKLDLEKISRLKSYTAVALYEICVRYKNNFRKEGKGERITNASPPEWWVDALTNIVPKTNKETGQPVRREWRKVKNEAVKKAIEEINAVTDLDIVLTEKKTGKAVSLVQFEIRLKKPEPREIQSSHFELIKSGICLGLTETQIASGIERTSVEQVGLGLAKLEARIKHQELEPVVNVGRYFNSIINDGAPVKVVNDAEIERKPALLTTDTPVAQEKSVLTLAREDFMTLPEVEKRGFAARALKVLVARGVATARIQRNAEEGVWSGVLLSQMIEIFSGEKSIKPAPSDGP
SIO_010081: PNAP_RS24035
subclass of: SO_0000673
so part of: PNAP_RS24035
location: 76189..77499
location: region:76189-77499:1
so has part: feature:76189-77499:1:exon

WP_041377775.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76189-77499:1:exon

PNAP_RS27460
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS27460
so part of: sequence
location: complement(77991..78278)
location: region:77991-78278:-1
so has part: feature:77991-78278:-1:exon
subclass of: SO_0000010

position:77991:-1
position: 77991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78278:-1
position: 78278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77991-78278:-1:exon

PNAP_RS27460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS27460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010458977.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MSTIIRLDMPAPSGENLKAARMAAGLSQVQAAELMGYPLQAGSRGGVQSRTWQALESATDDRNMPEPIFAMFLLLTGQHPEFRLIEKRSSETNPA
SIO_010081: PNAP_RS27460
subclass of: SO_0000673
so part of: PNAP_RS27460
location: complement(77991..78278)
location: region:77991-78278:-1
so has part: feature:77991-78278:-1:exon

WP_041377776.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77991-78278:-1:exon

PNAP_RS24045
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24045
old locus tag: Pnap_4696
so part of: sequence
location: 78689..79819
location: region:78689-79819:1
so has part: feature:78689-79819:1:exon
subclass of: SO_0000010

position:78689:1
position: 78689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79819:1
position: 79819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78689-79819:1:exon

PNAP_RS24045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24045
old locus tag: Pnap_4696
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006157828.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MBL fold metallo-hydrolase
translation: MSETPILDSRPDEWVNPAPSAAPYALQYPCGEPPASGQVREVAPGVLWLRMPLPFELDHINLWALADEDEHGPGWAIVDTGTKTPEALAAWRQLIAADGPLAATSQGARITRILCTHMHPDHVGMAGWLTRKFGCRLWMTRLEYLTCRTLAGDTGREAPDEAISFYRQAGWNEEALDVYRTRFGGFGKYMHALPDSFRRISDGETLRIGAHDWRVIVGRGHSPEHACLLSDELGVLVSGDQVLPRISSNVSVFPTEPDADPLGDWIASIAHLRTTLGDDLLVLPAHGEPFRGLHARLDRLAQGHDRGLERLRRSLADSPRRAIDVFGALFARPIDNNGHLLGLATGESLAHINHLLARGEAVCEMGVDGVRRYRMK
SIO_010081: PNAP_RS24045
subclass of: SO_0000673
so part of: PNAP_RS24045
location: 78689..79819
location: region:78689-79819:1
so has part: feature:78689-79819:1:exon

WP_041377777.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78689-79819:1:exon

PNAP_RS27465
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS27465
so part of: sequence
location: 80286..80435
location: region:80286-80435:1
so has part: feature:80286-80435:1:exon
subclass of: SO_0000010

position:80286:1
position: 80286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80435:1
position: 80435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80286-80435:1:exon

PNAP_RS27465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS27465
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLSSSIDSRRRREREMRELLAGQVWQPGAHREEIRSVLSAITDMMALSP
SIO_010081: PNAP_RS27465
subclass of: SO_0000673
so part of: PNAP_RS27465
location: 80286..80435
location: region:80286-80435:1
so has part: feature:80286-80435:1:exon

WP_157040554.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80286-80435:1:exon

PNAP_RS25335
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS25335
old locus tag: Pnap_4698
so part of: sequence
location: 80432..81538
location: region:80432-81538:1
so has part: feature:80432-81538:1:exon
subclass of: SO_0000010

position:80432:1
position: 80432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81538:1
position: 81538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80432-81538:1:exon

PNAP_RS25335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS25335
old locus tag: Pnap_4698
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798221.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB/RepB/Spo0J family partition protein
translation: MMTDDTSPFLPFVDRAPRPVVTLKPRARLAEATLASLRAAGSAAPGEALRLPLADIDEDPDQPRTVFDDEELQSMARSILAHGVVQPIVVRPPVNGRYVLAFGARRLRASRLAGVTDIPAVIRAQGPGDFAAQLIENQQRADLSNSDLAAAIARLVREGLTTRQIAAICALKDYQVTAFRQAGDLPPALSARLDTADMRALYDLFRQWSKTPAEVIAALPEAGTFLSVTEARRIIGAITGKPTGSIVLERARAQAAFQDSGQNLPGGEPEDEPEKAPPVREPPAKERPPIEEPPAPEGLPAQAQPKAAPGTVQASQGGAPVFLVAAGNGPSGRLVVDRRAGRAGWALVAYATGIEEVDAAQLRIVRIE
SIO_010081: PNAP_RS25335
subclass of: SO_0000673
so part of: PNAP_RS25335
location: 80432..81538
location: region:80432-81538:1
so has part: feature:80432-81538:1:exon

WP_011798484.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80432-81538:1:exon

PNAP_RS27470
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS27470
so part of: sequence
location: complement(81787..81954)
location: region:81787-81954:-1
so has part: feature:81787-81954:-1:exon
subclass of: SO_0000010

position:81787:-1
position: 81787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81954:-1
position: 81954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81787-81954:-1:exon

PNAP_RS27470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS27470
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQAEQWGIFAVSVLYAVAWMRGLWLHWLAPQHLHQPAFDNTIAHSAARKTSGAEN
SIO_010081: PNAP_RS27470
subclass of: SO_0000673
so part of: PNAP_RS27470
location: complement(81787..81954)
location: region:81787-81954:-1
so has part: feature:81787-81954:-1:exon

WP_157040555.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81787-81954:-1:exon

PNAP_RS28100
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS28100
so part of: sequence
location: complement(81944..82366)
location: region:81944-82366:-1
so has part: feature:81944-82366:-1:exon
subclass of: SO_0000010

position:81944:-1
position: 81944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82366:-1
position: 82366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81944-82366:-1:exon

PNAP_RS28100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS28100
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDAGGTRRVERPGLQTRGIRSLRAPGAGPEQNGGQRAQRAAAADAGHLGAGERMSVYRHGHGNTSFARWSSMVRLRAVHFGGNAGCTARGVSARCRLMNVFAAGTDASSSNGTNFSCLRIKLLGKRQLDTAFEQELTLAG
SIO_010081: PNAP_RS28100
subclass of: SO_0000673
so part of: PNAP_RS28100
location: complement(81944..82366)
location: region:81944-82366:-1
so has part: feature:81944-82366:-1:exon

WP_232290874.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81944-82366:-1:exon

PNAP_RS24060
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24060
old locus tag: Pnap_4699
pseudo: true
so part of: sequence
location: 82253..83228
location: region:82253-83228:1
so has part: feature:82253-83228:1:exon
subclass of: SO_0000010

position:82253:1
position: 82253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83228:1
position: 83228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82253-83228:1:exon

PNAP_RS24060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24060
old locus tag: Pnap_4699
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017669295.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: lyase
SIO_010081: PNAP_RS24060
subclass of: SO_0000673
so part of: PNAP_RS24060
location: 82253..83228
location: region:82253-83228:1
so has part: feature:82253-83228:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:82253-83228:1:exon

PNAP_RS24065
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24065
old locus tag: Pnap_4700
so part of: sequence
location: 83264..84334
location: region:83264-84334:1
so has part: feature:83264-84334:1:exon
subclass of: SO_0000010

position:83264:1
position: 83264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84334:1
position: 84334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83264-84334:1:exon

PNAP_RS24065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24065
old locus tag: Pnap_4700
EC number: 2.5.1.54
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018912884.1
GO function: GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
GO process: GO:0009423 - chorismate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-deoxy-7-phosphoheptulonate synthase
translation: MSTQISDIHIAQADPLPQPRLLQGELPAGEAEAAFIAASRAATRNILRGLDDRLLVIVGPCSIHEPESALEYAARLRRLAPRLDDSLLLVMRVYFEKPRTRMGWKGLIYDPELDGQGDIGAGLRHARRILLECARLGVPAASEILDLVTPQYYAELLTWGAIGARTVQSPLHRQMASALSAPVGFKNATNGSVGAAIDAIHVAVQSHRFPSISLEGKAIVITTTGNPDGHLVLRGASDGPNYDAASVSRAAASLSQAGLPARLVIDCSHGNSNKDFSRQPAVAADIAQQIASGSSSICGLMIESHLVEGRQDIVDGRQGLRYGQSVTDACIGWEATVAVLEQLAASVRQRRAGARA
SIO_010081: PNAP_RS24065
subclass of: SO_0000673
so part of: PNAP_RS24065
location: 83264..84334
location: region:83264-84334:1
so has part: feature:83264-84334:1:exon

WP_011798485.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83264-84334:1:exon

PNAP_RS27475
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS27475
old locus tag: Pnap_4701
so part of: sequence
location: 84339..84533
location: region:84339-84533:1
so has part: feature:84339-84533:1:exon
subclass of: SO_0000010

position:84339:1
position: 84339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84533:1
position: 84533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84339-84533:1:exon

PNAP_RS27475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS27475
old locus tag: Pnap_4701
inference: COORDINATES: protein motif:HMM:NF017496.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Uma2 family endonuclease
translation: MEGEEQQAERHEFYRGETFAMAGSMARHNRVVLNLASRIGEHLDGTRCQVFTTSMKGKRLGTAP
SIO_010081: PNAP_RS27475
subclass of: SO_0000673
so part of: PNAP_RS27475
location: 84339..84533
location: region:84339-84533:1
so has part: feature:84339-84533:1:exon

WP_157040560.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84339-84533:1:exon

PNAP_RS24075
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24075
old locus tag: Pnap_4702
pseudo: true
so part of: sequence
location: complement(84547..>84750)
location: region:84547-84750:-1
so has part: feature:84547-84750:-1:exon
subclass of: SO_0000010

position:84547:-1
position: 84547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84750:-1
position: 84750
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84547-84750:-1:exon

PNAP_RS24075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24075
old locus tag: Pnap_4702
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006484960.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase domain-containing protein
SIO_010081: PNAP_RS24075
subclass of: SO_0000673
so part of: PNAP_RS24075
location: complement(84547..>84750)
location: region:84547-84750:-1
so has part: feature:84547-84750:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:84547-84750:-1:exon

PNAP_RS24080
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24080
so part of: sequence
location: complement(84753..85064)
location: region:84753-85064:-1
so has part: feature:84753-85064:-1:exon
subclass of: SO_0000010

position:84753:-1
position: 84753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85064:-1
position: 85064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84753-85064:-1:exon

PNAP_RS24080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24080
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MALLAGVENTRAASPKSSLRQQQVQLGQRAHRGLRGAQFHVSASCGIEHPGGNHDHDAGSRLQVDYLAVGTLLAVLALEAASIQRMPAIEDFNFLPDMGTMTR
SIO_010081: PNAP_RS24080
subclass of: SO_0000673
so part of: PNAP_RS24080
location: complement(84753..85064)
location: region:84753-85064:-1
so has part: feature:84753-85064:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:84753-85064:-1:exon

PNAP_RS24085
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24085
old locus tag: Pnap_4704
so part of: sequence
location: 85262..87331
location: region:85262-87331:1
so has part: feature:85262-87331:1:exon
subclass of: SO_0000010

position:85262:1
position: 85262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87331:1
position: 87331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85262-87331:1:exon

PNAP_RS24085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24085
old locus tag: Pnap_4704
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004272601.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MTTSDLLPAAVLRRKAVVYVRQSTQSQVQTNLESQRRQYDLVAQARRLGFAQVEVIDDDLGRSASGMVDRPGFERLVAWLCAGEVGAVLCFDASRLARNGRDWHHLLELCGLVEARVIDPDGVYDPCRPNDRLLLGMKGSISEFELGVIRARMFEAARAKAHRGELRISVPIGYVWHRQIGLGLDPDMRLQETIRLIFARFRTLGSARQVMLSLAADDVHFPRPSDGKKMVSFDWTPIRYRNVISILKNPFYAGVYAYGKSEKRTTLVQGRLRKTYKHGKPLDRWDVMIKDHHEAYIDWAEFERNQKQLAVNAYGKVDGTKSGRGGRALLAGMLCCGRCGRRLTVAYTGRGVPQPVYRCDRPNLQLAQPRCFTFGARRPDEAIARELLRAVEPLAVEAALQAERRYMQVQADQRRIVELELQQARYEAGLAERRYAACDPDHRLIAAQLEKSWEAALQRVLACEQRLNVARQVQSSARPDLTGLEEDLAAAWDAPGVTMRARQQLLRTLVKDIVADVDDQAREVVLTIHWRGGQHSQVRVVKPRTGEHGCRTPDEALAVMRSMAGKWSDEHIAATLNRMGLPTGQAKTWTAHRVSSVRRVNDIHAYRSAEKDGQWLTMSEAAAKLGVNNHRIRRLIKEGLLPAEQVVPRAPYQIRASDLLEQRVIDAIARTLSPCRAVSEKQMSMFSST
SIO_010081: PNAP_RS24085
subclass of: SO_0000673
so part of: PNAP_RS24085
location: 85262..87331
location: region:85262-87331:1
so has part: feature:85262-87331:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:85262-87331:1:exon

PNAP_RS24090
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24090
old locus tag: Pnap_4705
so part of: sequence
location: complement(87344..88750)
location: region:87344-88750:-1
so has part: feature:87344-88750:-1:exon
subclass of: SO_0000010

position:87344:-1
position: 87344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88750:-1
position: 88750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87344-88750:-1:exon

PNAP_RS24090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24090
old locus tag: Pnap_4705
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798490.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family transposase
translation: MLNVHTLSAQDFVGLGPEAAAALAAKVLQHIGQQSQQIDSQAKTIEFKEARIQSILFELRRLKAWRFDAKTERMNAEQRQLFEETLAADQADLEAQLAALKAVAKDSGDTADTEHDTRRKPKRQALPEHLKRVEHHHEPENTTCGCGQAMVRIGEDVSERLDIIPAEFFVHRHIRGKWACKCCQTLVQEPVGPQIIDKGMPTAGLVAHTAVSRFVDHIPYYRQEQINARSGVHTPRSTLASWSGQAGAALVPLYAAHREFVLSCAVVHADETPVAMLDPGAGKTKRAYVWAYARSGFDVSPGVVYEFCLGRGAKYPLEFLKGWSGTLISDGYGVYDQVLKQESRVGAACLAHARRKFDELVKDRLSPVGTQVIQRIAALYQIERQVKGLSPEDRLSIRQSSAKPLCKDLHAWLKRERQRVPEGSATAKAIDYSLNRWEALTTYLADGNVQIDNNHLENLIRPWAMACS
SIO_010081: PNAP_RS24090
subclass of: SO_0000673
so part of: PNAP_RS24090
location: complement(87344..88750)
location: region:87344-88750:-1
so has part: feature:87344-88750:-1:exon

WP_011798486.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87344-88750:-1:exon

PNAP_RS24095
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
gene: tnpB
locus tag: PNAP_RS24095
old locus tag: Pnap_4706
so part of: sequence
location: complement(88833..89174)
location: region:88833-89174:-1
so has part: feature:88833-89174:-1:exon
subclass of: SO_0000010

position:88833:-1
position: 88833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89174:-1
position: 89174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88833-89174:-1:exon

PNAP_RS24095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
gene: tnpB
locus tag: PNAP_RS24095
old locus tag: Pnap_4706
inference: COORDINATES: protein motif:HMM:NF017528.2
note: TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family insertion sequence element accessory protein TnpB
translation: MIRIDALWLATAPIDMRMGTERLLARVVQVFGVAQAHHGYLFANARGNRIKLLLHDGFGLWCAARRLNQGGFEWPRGGADMATSITLTKPQFDALVLGLPWSRLEQMQTITHL
SIO_010081: PNAP_RS24095
subclass of: SO_0000673
so part of: PNAP_RS24095
location: complement(88833..89174)
location: region:88833-89174:-1
so has part: feature:88833-89174:-1:exon

WP_011798487.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88833-89174:-1:exon

PNAP_RS24100
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24100
old locus tag: Pnap_4707
so part of: sequence
location: complement(89171..89530)
location: region:89171-89530:-1
so has part: feature:89171-89530:-1:exon
subclass of: SO_0000010

position:89171:-1
position: 89171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89530:-1
position: 89530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89171-89530:-1:exon

PNAP_RS24100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24100
old locus tag: Pnap_4707
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017685557.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MEHSKTLARRPHSEAFRTQVLSECSQPGACVAAIALAHGLNANLVHKWRRKARQAPADGTRQRPECAGFVALALPCAQQAAPALPDIHMELRRGAATIEVRWPVAAAAECAAWLREWLR
SIO_010081: PNAP_RS24100
subclass of: SO_0000673
so part of: PNAP_RS24100
location: complement(89171..89530)
location: region:89171-89530:-1
so has part: feature:89171-89530:-1:exon

WP_041377779.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:89171-89530:-1:exon

PNAP_RS24105
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
gene: tnpB
locus tag: PNAP_RS24105
old locus tag: Pnap_4708
so part of: sequence
location: 89640..89930
location: region:89640-89930:1
so has part: feature:89640-89930:1:exon
subclass of: SO_0000010

position:89640:1
position: 89640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89930:1
position: 89930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89640-89930:1:exon

PNAP_RS24105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
gene: tnpB
locus tag: PNAP_RS24105
old locus tag: Pnap_4708
inference: COORDINATES: protein motif:HMM:NF017528.2
note: TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family insertion sequence element accessory protein TnpB
translation: MGTERLLARVVQVFGVAQAHHGYLFANARGNRIKLLLHDGFGLWCAARRLNQGGFEWPRGGADMATSITLTKPQFDALVLGLPWSRLEQMQTITHL
SIO_010081: PNAP_RS24105
subclass of: SO_0000673
so part of: PNAP_RS24105
location: 89640..89930
location: region:89640-89930:1
so has part: feature:89640-89930:1:exon

WP_198140745.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:89640-89930:1:exon

PNAP_RS24110
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24110
old locus tag: Pnap_4709
pseudo: true
so part of: sequence
location: 90013..91606
location: region:90013-91606:1
so has part: feature:90013-91606:1:exon
subclass of: SO_0000010

position:90013:1
position: 90013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91606:1
position: 91606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90013-91606:1:exon

PNAP_RS24110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24110
old locus tag: Pnap_4709
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798239.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS66 family transposase
SIO_010081: PNAP_RS24110
subclass of: SO_0000673
so part of: PNAP_RS24110
location: 90013..91606
location: region:90013-91606:1
so has part: feature:90013-91606:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:90013-91606:1:exon

PNAP_RS24115
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24115
old locus tag: Pnap_4710
so part of: sequence
location: 91671..92828
location: region:91671-92828:1
so has part: feature:91671-92828:1:exon
subclass of: SO_0000010

position:91671:1
position: 91671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92828:1
position: 92828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91671-92828:1:exon

PNAP_RS24115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24115
old locus tag: Pnap_4710
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020652834.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MNRAAWSSLAASRILLRLLVRAFAPEGPLIFGLDDTIERRWGARIAARGIYRDPVRSSRSHFVKVSGLRWLCMMLLVPIPWAARVWALPFLTTLCPSQRCHDSQGRRHKKLTDWARQMVQQVRRWLPGRQIVIVADSAFAALDFLGATRRHACVITHLRLDAALYAPAPERCAGQRGRTRLKGERLPALSQVLANPATAWTALTMPFWYGEHDRAVEVASGTAVWYHSGMVPIVLRWVLIRDPLKQFETQALLCTAPEATPAFILDCFVQRWQVEVTFEEARAHLGVETQRQWSDKAIARTTPCLFGLYSLVTLAAQDLFSTGQLYRRCAAWYPKPQATFSDTIAYVRRELWSHAYFSTSHNEADMMKIPRPLVDRFIDTLCYAA
SIO_010081: PNAP_RS24115
subclass of: SO_0000673
so part of: PNAP_RS24115
location: 91671..92828
location: region:91671-92828:1
so has part: feature:91671-92828:1:exon

WP_011798491.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91671-92828:1:exon

PNAP_RS24120
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24120
old locus tag: Pnap_4711
so part of: sequence
location: 92961..93977
location: region:92961-93977:1
so has part: feature:92961-93977:1:exon
subclass of: SO_0000010

position:92961:1
position: 92961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93977:1
position: 93977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92961-93977:1:exon

PNAP_RS24120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24120
old locus tag: Pnap_4711
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612075.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MAIITIGIDLAKSVFAVHGVNESGKPELVRPEVPRAKLMELIANVPPCLIGMEACSGAHHWAREFSRFGHTVRLMAPKFVAPYRMSGKRGKNDAADAAAICEAVARPNMRFVPLKSIEQQSRLFVHRARQGYVEQRTALINRIRGLLSELGIVLPLKAATVRLEAHKHLEDLPGWCNTVVGDALSELTHLDERIAQYDKYIAQAAAEDPQSRQLMHLSGIGPTTASAIVATVGKGHDFSCGRQFCAWLGLVPGQYSSGGKQRLGRITKAGDSYLRTLLVLGARAALATAKNKTDPVSRWAISVQERRGYWKAVVAIAAKNARMCWAMLQRGEAFKMPA
SIO_010081: PNAP_RS24120
subclass of: SO_0000673
so part of: PNAP_RS24120
location: 92961..93977
location: region:92961-93977:1
so has part: feature:92961-93977:1:exon

WP_011798492.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92961-93977:1:exon

PNAP_RS24125
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24125
old locus tag: Pnap_4712
so part of: sequence
location: complement(94695..95765)
location: region:94695-95765:-1
so has part: feature:94695-95765:-1:exon
subclass of: SO_0000010

position:94695:-1
position: 94695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95765:-1
position: 95765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94695-95765:-1:exon

PNAP_RS24125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24125
old locus tag: Pnap_4712
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798207.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MSEITRVGVDLAKSVIQVNAVDAGGKLVTNRQLSRDKFVSWCGQLPAGCLVAMEACGGSHYWTRKLMALGLNVKIIAPHLVAPYRLQGKGGKNDANDAAAICEAASRPTMRFVPLKTTVQQGILCVHRLREGLKEERTASINRIRGMLAEFGLVASKSPEKLREKLTDMLEDAGNDLCGLARLVVQEAYDHWKDIDERIKWCDERITAHVKDDAQAKAAKALMGVGPVTASAVVATVGDFNQFKNGAQFGAWLGLTPRQNSSGGKNSLGGITKRGDMYLRMLLIQGAKSVVMTAQKRDDPISKWLYQLREKSGWQKAAVAMANKNARILWAMMTKGCRFDPRHLSVNPACAATAMT
SIO_010081: PNAP_RS24125
subclass of: SO_0000673
so part of: PNAP_RS24125
location: complement(94695..95765)
location: region:94695-95765:-1
so has part: feature:94695-95765:-1:exon

WP_011798493.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94695-95765:-1:exon

PNAP_RS24130
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24130
old locus tag: Pnap_4713
pseudo: true
so part of: sequence
location: 95955..97056
location: region:95955-97056:1
so has part: feature:95955-97056:1:exon
subclass of: SO_0000010

position:95955:1
position: 95955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97056:1
position: 97056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95955-97056:1:exon

PNAP_RS24130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24130
old locus tag: Pnap_4713
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011295755.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5 family transposase
SIO_010081: PNAP_RS24130
subclass of: SO_0000673
so part of: PNAP_RS24130
location: 95955..97056
location: region:95955-97056:1
so has part: feature:95955-97056:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:95955-97056:1:exon

PNAP_RS24135
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24135
old locus tag: Pnap_4714
so part of: sequence
location: 97345..98019
location: region:97345-98019:1
so has part: feature:97345-98019:1:exon
subclass of: SO_0000010

position:97345:1
position: 97345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98019:1
position: 98019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97345-98019:1:exon

PNAP_RS24135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24135
old locus tag: Pnap_4714
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLVSKLLLATSICLMLACPSLFVIAQETDNSTLHQAQAGEPPGTSHSVISTVSDIERYKLDLEIKKFDFEREKYRDSIDIERTKAWISALSIVIPLLVVAATIGFSVRTQKQQADLTRQALQEESQRDFDLKVAEALISAPGPVEAHNRALALKDLLPHRLSSDFANAFEPEKHGRLQAPEGRKEFMRLVAAKPDNKDAIIKLWKELWPGDVWVQKVSSNDSLT
SIO_010081: PNAP_RS24135
subclass of: SO_0000673
so part of: PNAP_RS24135
location: 97345..98019
location: region:97345-98019:1
so has part: feature:97345-98019:1:exon

WP_041377781.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97345-98019:1:exon

PNAP_RS24140
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24140
old locus tag: Pnap_4715
so part of: sequence
location: 98166..98402
location: region:98166-98402:1
so has part: feature:98166-98402:1:exon
subclass of: SO_0000010

position:98166:1
position: 98166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98402:1
position: 98402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98166-98402:1:exon

PNAP_RS24140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24140
old locus tag: Pnap_4715
inference: COORDINATES: protein motif:HMM:NF013014.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: H-NS histone family protein
translation: MNELGELRQQIAEMQKQAADLQKKNRRAILAELREQMAAYGITAEELSRPAAKAPKPRQPLARPSSPPRARSRQCLRQ
SIO_010081: PNAP_RS24140
subclass of: SO_0000673
so part of: PNAP_RS24140
location: 98166..98402
location: region:98166-98402:1
so has part: feature:98166-98402:1:exon

WP_011798495.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:98166-98402:1:exon

PNAP_RS24145
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24145
old locus tag: Pnap_4716
so part of: sequence
location: complement(98742..99356)
location: region:98742-99356:-1
so has part: feature:98742-99356:-1:exon
subclass of: SO_0000010

position:98742:-1
position: 98742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99356:-1
position: 99356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98742-99356:-1:exon

PNAP_RS24145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24145
old locus tag: Pnap_4716
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011799886.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1326 domain-containing protein
translation: MSSWTITGQYMETCNCAFLCPCLTSNLTAQPTEGDCKAAVALHIDKGEKDGVRLGGLSFIVMLHSPGPMGQGDIAVGLIVDETASPPQVEAIRAIATGSAGGPMAMLAPLVGRIAGVERRPIRFEANGLMYSVSAGELVNQACEGLASVTAPGQAIGIDNIAHPVNSRLSLARATRSRFHAFGIDWEDATGMRNGHFAPFAWAG
SIO_010081: PNAP_RS24145
subclass of: SO_0000673
so part of: PNAP_RS24145
location: complement(98742..99356)
location: region:98742-99356:-1
so has part: feature:98742-99356:-1:exon

WP_011798496.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:98742-99356:-1:exon

PNAP_RS24150
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24150
old locus tag: Pnap_4717
so part of: sequence
location: 99489..100283
location: region:99489-100283:1
so has part: feature:99489-100283:1:exon
subclass of: SO_0000010

position:99489:1
position: 99489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100283:1
position: 100283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99489-100283:1:exon

PNAP_RS24150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24150
old locus tag: Pnap_4717
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011799887.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2182 domain-containing protein
translation: MQQQERASGNKPPPGLGSLVARQPMLTMCILAVSVIGWAVLAWMAVDMEHPFAQLTMPVSSKWSVANMLAIWTMWSLMMAAMMLPSALPMVLTFVNLSGRSRQRARGCSFVAAYVLIWLTFSAGAAAAQWALQAMGWVNPMIVSTSAWLTGLLLVAAGLYQFSRLKHLCLSRCRTPVVFLLGQWRAGVSGAFVMGVQHGLLCLGCCWALMALLFVGGVMNLAWIAALSMAVAIEKLAPGGERMAKALGLVLMAAGLLKLVVLMA
SIO_010081: PNAP_RS24150
subclass of: SO_0000673
so part of: PNAP_RS24150
location: 99489..100283
location: region:99489-100283:1
so has part: feature:99489-100283:1:exon

WP_011798497.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:99489-100283:1:exon

PNAP_RS24155
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24155
old locus tag: Pnap_4718
so part of: sequence
location: complement(100462..100899)
location: region:100462-100899:-1
so has part: feature:100462-100899:-1:exon
subclass of: SO_0000010

position:100462:-1
position: 100462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100899:-1
position: 100899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100462-100899:-1:exon

PNAP_RS24155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24155
old locus tag: Pnap_4718
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007874614.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: universal stress protein
translation: MYKRILLAYDGSAPGQQALLDCHEIAQWSHSDLTLIAVMPFPLASVGTEGVVYNETVQESEKTRYQGILDTGVRRLADAGLSARGEVVIGDAVSEITQYARRIGADLIVVGHKHLDGWAARWWRGSVSKALIEQAPCSVLVVITQ
SIO_010081: PNAP_RS24155
subclass of: SO_0000673
so part of: PNAP_RS24155
location: complement(100462..100899)
location: region:100462-100899:-1
so has part: feature:100462-100899:-1:exon

WP_011798498.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100462-100899:-1:exon

PNAP_RS24160
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24160
pseudo: true
so part of: sequence
location: complement(100931..101138)
location: region:100931-101138:-1
so has part: feature:100931-101138:-1:exon
subclass of: SO_0000010

position:100931:-1
position: 100931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101138:-1
position: 101138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100931-101138:-1:exon

PNAP_RS24160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019652715.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: dodecin family protein
SIO_010081: PNAP_RS24160
subclass of: SO_0000673
so part of: PNAP_RS24160
location: complement(100931..101138)
location: region:100931-101138:-1
so has part: feature:100931-101138:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:100931-101138:-1:exon

PNAP_RS24165
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24165
old locus tag: Pnap_4720
so part of: sequence
location: 101362..101760
location: region:101362-101760:1
so has part: feature:101362-101760:1:exon
subclass of: SO_0000010

position:101362:1
position: 101362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101760:1
position: 101760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101362-101760:1:exon

PNAP_RS24165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24165
old locus tag: Pnap_4720
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798315.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIEALVSGKLHGQPAQKTGRTGTLFVVAKMRAHAGDSDVFVNVIAFSQAACEALLALGDSDAVALAGSLVPKAWIDREGTARPALDLVAGQVLTAYHVSRKRKALERRPPGPSDSQQPARHDELDDGRPLDF
SIO_010081: PNAP_RS24165
subclass of: SO_0000673
so part of: PNAP_RS24165
location: 101362..101760
location: region:101362-101760:1
so has part: feature:101362-101760:1:exon

WP_011798500.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:101362-101760:1:exon

PNAP_RS27480
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS27480
so part of: sequence
location: complement(102026..102193)
location: region:102026-102193:-1
so has part: feature:102026-102193:-1:exon
subclass of: SO_0000010

position:102026:-1
position: 102026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102193:-1
position: 102193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102026-102193:-1:exon

PNAP_RS27480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS27480
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFFLNRSVNWNNGDYRDYCDHRARVKRRLRLRMSIGLTLMGCMLVIAAWAPNVSV
SIO_010081: PNAP_RS27480
subclass of: SO_0000673
so part of: PNAP_RS27480
location: complement(102026..102193)
location: region:102026-102193:-1
so has part: feature:102026-102193:-1:exon

WP_157040556.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102026-102193:-1:exon

PNAP_RS24170
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24170
old locus tag: Pnap_4721
so part of: sequence
location: complement(102528..104033)
location: region:102528-104033:-1
so has part: feature:102528-104033:-1:exon
subclass of: SO_0000010

position:102528:-1
position: 102528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104033:-1
position: 104033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102528-104033:-1:exon

PNAP_RS24170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24170
old locus tag: Pnap_4721
inference: COORDINATES: protein motif:HMM:NF019604.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD/NAD(P)-binding protein
translation: MLPDKPSHIAIVGGGFSGVCAAVQLVRSSPAPLHITLIEPRDRVGLGLAYSTTDPDHRLNGPTWVHSIDPQDSGHFTRWCEKQGIFSADSQALLPDGSAFVRRADFGRYMESAFREHAQWPATQSTITHLRARAVDALEKGDSVELVTDAGHSLVCDLLIIATGNPQPRLQAPLDASLAAHPGVVENPLDTQRLLEIPAQASVLIIGSSLTALDVLATLLRQGHTGKMVSISRRGLQPRPQAPSAGPLSPPPTVPVAPATATGRQMLDRILGPAPDFLTQPGVEPTLRAWIRALRQRIGEVQAQGASWHLAFDELRDVVWRTWPLLPTAEKRRFLKKARTWYDVHRFRSPPQTQSLVQAAQAQGRIEFRVDRIQSVAALEASGPLRVCFAPRQGNAKRCEAFEVIINCTGLDVLARVSSNPFLSALMDKGWLTPDACGIGFAVDEHCRALTAKGTKQRAVRVIGPPTAGTFGDPLGAMFIAAQIYRIVPDVLSSLEASRMR
SIO_010081: PNAP_RS24170
subclass of: SO_0000673
so part of: PNAP_RS24170
location: complement(102528..104033)
location: region:102528-104033:-1
so has part: feature:102528-104033:-1:exon

WP_198140747.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102528-104033:-1:exon

PNAP_RS26515
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS26515
old locus tag: Pnap_4722
so part of: sequence
location: complement(104435..104677)
location: region:104435-104677:-1
so has part: feature:104435-104677:-1:exon
subclass of: SO_0000010

position:104435:-1
position: 104435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104677:-1
position: 104677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104435-104677:-1:exon

PNAP_RS26515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS26515
old locus tag: Pnap_4722
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798502.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tail fiber protein
translation: MEPFLGQIQLLPYNFAPNGWAFCEGQLMAISQNTALFSLLGTTYGGDGATTFALPNLKGKEPDPNTHFCIALEGIYPSRS
SIO_010081: PNAP_RS26515
subclass of: SO_0000673
so part of: PNAP_RS26515
location: complement(104435..104677)
location: region:104435-104677:-1
so has part: feature:104435-104677:-1:exon

WP_011798502.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:104435-104677:-1:exon

PNAP_RS28105
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS28105
pseudo: true
so part of: sequence
location: complement(<104911..>105058)
location: region:104911-105058:-1
so has part: feature:104911-105058:-1:exon
subclass of: SO_0000010

position:104911:-1
position: 104911
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:105058:-1
position: 105058
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104911-105058:-1:exon

PNAP_RS28105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS28105
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014403018.1
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5/IS1182 family transposase
SIO_010081: PNAP_RS28105
subclass of: SO_0000673
so part of: PNAP_RS28105
location: complement(<104911..>105058)
location: region:104911-105058:-1
so has part: feature:104911-105058:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:104911-105058:-1:exon

PNAP_RS27810
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS27810
so part of: sequence
location: complement(105038..105220)
location: region:105038-105220:-1
so has part: feature:105038-105220:-1:exon
subclass of: SO_0000010

position:105038:-1
position: 105038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105220:-1
position: 105220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105038-105220:-1:exon

PNAP_RS27810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS27810
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPCCGWPARTPPGAIFPSDWGKWSAVYQRYAYWCGKGHCERLFKGAQQPDLEAMMVDSTC
SIO_010081: PNAP_RS27810
subclass of: SO_0000673
so part of: PNAP_RS27810
location: complement(105038..105220)
location: region:105038-105220:-1
so has part: feature:105038-105220:-1:exon

WP_198140748.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:105038-105220:-1:exon

PNAP_RS26525
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS26525
so part of: sequence
location: complement(105302..106434)
location: region:105302-106434:-1
so has part: feature:105302-106434:-1:exon
subclass of: SO_0000010

position:105302:-1
position: 105302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106434:-1
position: 106434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105302-106434:-1:exon

PNAP_RS26525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS26525
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611276.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 family transposase
translation: MEHYKVTLSEPERAELQGIAGKGTHAASKVINALILLNCDQSGGRTERARTCDIATMLCVSERKVDRIKKKFVLEGLDLTLNRQPSRCEYDLKIDGRLEAQLLALSCSAPPEGQARWSLRLLADRLVELEYIDTVSHETVRRALKKNELKPWRKVGWVIAPPASAAFVAAMEKVLDIYSRPMDAKHPVVCMDETPRQLIRETREPIAAAPGRPERHDYEYERCGVCNVFMASEPLAGRRLTKVTERRTKTDWAVFVQDIAASYPDAERITLVMDNLNTHTPGSLYEAFSPEQAKALWDRFEFVYTPKHGSWLNMAEIEINVMVDQCLSRRIDSIETVRSEVAAWQARRDNLQAKVNWQFTTKDARIKLKRLYPTTSS
SIO_010081: PNAP_RS26525
subclass of: SO_0000673
so part of: PNAP_RS26525
location: complement(join(105302..106002,106002..106434))
location: region:105302-106434:-1
so has part: feature:106002-106434:-1:exon
so has part: feature:105302-106002:-1:exon

WP_086000545.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106002-106434:-1:exon

position:106002:-1
position: 106002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:105302-106002:-1:exon

PNAP_RS25340
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS25340
old locus tag: Pnap_4726
so part of: sequence
location: 106723..107763
location: region:106723-107763:1
so has part: feature:106723-107763:1:exon
subclass of: SO_0000010

position:106723:1
position: 106723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107763:1
position: 107763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106723-107763:1:exon

PNAP_RS25340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS25340
old locus tag: Pnap_4726
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPRYGIGMVIIKHQGVILASALGRGAAAVAGAWLLMLGHAASSPFPDQPKTTAAPRSAALAPVQRTACPLQPAAAATGRKDGKFSLQADLSGMTAKNIASFIVLGKEAAAAGRPRDAEVAFLMSCRVADKLKGMDSVESADAKYQLGWLYAGLALEDGSARASRAELRRRAQRLYADSLRTYLARYGQAHEKSRFAAEGLKALGQPVRSAQEGTSPPSQALMPPSQARRNEAAQAALPAPHGPSTAAPPGPSFDCAKARSMPEKMICSDAELARLDRELGRVYARAKSAAADGAAFGRQNSEEWRRREATCRDRECLLRWYANRHDQLMHVIEGPKQEPAPSTVSR
SIO_010081: PNAP_RS25340
subclass of: SO_0000673
so part of: PNAP_RS25340
location: 106723..107763
location: region:106723-107763:1
so has part: feature:106723-107763:1:exon

WP_049763850.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106723-107763:1:exon

PNAP_RS24190
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24190
so part of: sequence
location: 107898..108092
location: region:107898-108092:1
so has part: feature:107898-108092:1:exon
subclass of: SO_0000010

position:107898:1
position: 107898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108092:1
position: 108092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107898-108092:1:exon

PNAP_RS24190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24190
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPEVANDETREYSTASMSELKKMVGISVLLGLSQQVRDGGMNLPRPGARRDSQGSLHGNQPYLQ
SIO_010081: PNAP_RS24190
subclass of: SO_0000673
so part of: PNAP_RS24190
location: 107898..108092
location: region:107898-108092:1
so has part: feature:107898-108092:1:exon

WP_041377783.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107898-108092:1:exon

PNAP_RS24195
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24195
old locus tag: Pnap_4727
so part of: sequence
location: 108201..108569
location: region:108201-108569:1
so has part: feature:108201-108569:1:exon
subclass of: SO_0000010

position:108201:1
position: 108201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108569:1
position: 108569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108201-108569:1:exon

PNAP_RS24195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24195
old locus tag: Pnap_4727
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007221374.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: calcium-binding protein
translation: MKRIPEQPDRENRIAFEIVVDAYDAAERAMGWYCYLQDELQVPFKATCRSARATSPLEVGVEVEVVDLASEDDCMSEIFVLVRYAKSRLAVPLEQLACHALDKQTCQAVADWHYWVARGYEY
SIO_010081: PNAP_RS24195
subclass of: SO_0000673
so part of: PNAP_RS24195
location: 108201..108569
location: region:108201-108569:1
so has part: feature:108201-108569:1:exon

WP_011798507.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108201-108569:1:exon

PNAP_RS24205
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24205
old locus tag: Pnap_4728
so part of: sequence
location: 108970..109374
location: region:108970-109374:1
so has part: feature:108970-109374:1:exon
subclass of: SO_0000010

position:108970:1
position: 108970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109374:1
position: 109374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108970-109374:1:exon

PNAP_RS24205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24205
old locus tag: Pnap_4728
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015451776.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nuclear transport factor 2 family protein
translation: MQMLIPEVTTDVLQAFADAWNRHDVDVLMSFMTEDCVFESSAGADVCGTRYVGRQAVRAGFAQVWGVFPDAHWGNVRHFVHGNRGVSEWTFTGTRADGTRVEVHGCDLFTFRDGKILLKNSYRKNRPPSENSTR
SIO_010081: PNAP_RS24205
subclass of: SO_0000673
so part of: PNAP_RS24205
location: 108970..109374
location: region:108970-109374:1
so has part: feature:108970-109374:1:exon

WP_011798508.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108970-109374:1:exon

PNAP_RS24210
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24210
old locus tag: Pnap_4729
so part of: sequence
location: complement(109715..111022)
location: region:109715-111022:-1
so has part: feature:109715-111022:-1:exon
subclass of: SO_0000010

position:109715:-1
position: 109715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111022:-1
position: 111022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109715-111022:-1:exon

PNAP_RS24210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24210
old locus tag: Pnap_4729
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007579901.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS4 family transposase
translation: MELGDERLNRRAVLLAERLGQKPSASIPGACQSWAETAAAYRFLCNEEVSWDKVLAPHLQASQARMAQHQVVLCLQDTTELDYHGQDIEGLGPLNYEAQRGLYLHPTYVVSPEREPLGVFNAWTWAREFKAADGKRGGPCESTRWIESYERIAESAQQLPQTRHVCIGDRESDMLELMVKARDLGYPADYLVRSQHNRVLPGGDKLWDRVMVQTSLGRIRFMLPAGRGRKSRTVEQDIRIERVQLSDRDKGVIEVSCLVASEVNAPAGVKPVVWRLLSNRVASTLEQASELIDWYRSRWEIELFFLILKEGCRVERLQLSDKDRLESALAIYLVIAWRINRLMRLGRTVPELDAELVFEPDEWRAAYILNKKPIPKKMPGLNEVIRLIARRGGFLGRKGDGEPGARTLWLGLQEIAVFVEGARYARSYSETGICV
SIO_010081: PNAP_RS24210
subclass of: SO_0000673
so part of: PNAP_RS24210
location: complement(109715..111022)
location: region:109715-111022:-1
so has part: feature:109715-111022:-1:exon

WP_232290801.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:109715-111022:-1:exon

PNAP_RS24215
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24215
old locus tag: Pnap_4730
so part of: sequence
location: 111604..111969
location: region:111604-111969:1
so has part: feature:111604-111969:1:exon
subclass of: SO_0000010

position:111604:1
position: 111604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111969:1
position: 111969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111604-111969:1:exon

PNAP_RS24215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24215
old locus tag: Pnap_4730
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798509.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: H-NS histone family protein
translation: MNELIKLRQQIAEMEKQAADLQKKNRPAVLAQLREQMAAYGITADELSRPAAKATKPKATLAKPAASPTKGKKPVVHSPAKYRGPEGQEWSGRGTAPKWLNDLLAGGKTRDDLLIRQDTAA
SIO_010081: PNAP_RS24215
subclass of: SO_0000673
so part of: PNAP_RS24215
location: 111604..111969
location: region:111604-111969:1
so has part: feature:111604-111969:1:exon

WP_011798509.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111604-111969:1:exon

PNAP_RS24220
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24220
old locus tag: Pnap_R0062
so part of: sequence
location: complement(112094..112170)
location: region:112094-112170:-1
so has part: feature:112094-112170:-1:exon
subclass of: SO_0000663

position:112094:-1
position: 112094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112170:-1
position: 112170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112094-112170:-1:exon

PNAP_RS24220
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 365044
locus tag: PNAP_RS24220
old locus tag: Pnap_R0062
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(112134..112136),aa:Met,seq:cat)
SIO_010081: PNAP_RS24220
subclass of: SO_0000673
so part of: PNAP_RS24220
location: complement(112094..112170)
location: region:112094-112170:-1
so has part: feature:112094-112170:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:112094-112170:-1:exon

PNAP_RS26530
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS26530
old locus tag: Pnap_4731
so part of: sequence
location: 112857..113309
location: region:112857-113309:1
so has part: feature:112857-113309:1:exon
subclass of: SO_0000010

position:112857:1
position: 112857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113309:1
position: 113309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112857-113309:1:exon

PNAP_RS26530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS26530
old locus tag: Pnap_4731
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798118.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA-binding protein
translation: MGNKLYVGNLPYTVRDEDLQQSFGQFGAVTSAKVMMERDTGRSKGFGFVEMANDAQAQAAINGMNGQPLGGRSITVNEARPMEARPPRTGGFGGGGGGDRSGGGGYGGGDRSGGGGGYSGGRSGGGGYGGGDRSGGGGYGGGGGGGRGGY
SIO_010081: PNAP_RS26530
subclass of: SO_0000673
so part of: PNAP_RS26530
location: 112857..113309
location: region:112857-113309:1
so has part: feature:112857-113309:1:exon

WP_011798510.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:112857-113309:1:exon

PNAP_RS24230
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
gene: yghU
locus tag: PNAP_RS24230
old locus tag: Pnap_4732
so part of: sequence
location: 113643..114518
location: region:113643-114518:1
so has part: feature:113643-114518:1:exon
subclass of: SO_0000010

position:113643:1
position: 113643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114518:1
position: 114518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113643-114518:1:exon

PNAP_RS24230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
gene: yghU
locus tag: PNAP_RS24230
old locus tag: Pnap_4732
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798117.1
GO function: GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0006749 - glutathione metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutathione-dependent disulfide-bond oxidoreductase
translation: MDNLSSYTPPKVWSGLKESGGRFASINRPTAGPTHDKALPVGRHPLQLYSLGTPNGVKVTVMLEELLAAGHTGAEYDAWLIRIQDGEQFGSGFVSVNPNSKIPALLDRSGAAPVRVFESGAILLYLAEKFGAFLPSSGAKRAECLSWLFWQMGSAPFLGGGFGHFYAYAPTKIEYAIDRYAMEVKRQLDVLDRRLAESPFLAGDEYTVADMAVWPWYGALVKGQLYEAGEFLQVQAYRHVLRWTDQIAQRPAAQRGRMVNRTIGALSSQLHERHDAGDFDTRTQDKLAAPP
SIO_010081: PNAP_RS24230
subclass of: SO_0000673
so part of: PNAP_RS24230
location: 113643..114518
location: region:113643-114518:1
so has part: feature:113643-114518:1:exon

WP_011798511.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113643-114518:1:exon

PNAP_RS24235
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24235
old locus tag: Pnap_4733
so part of: sequence
location: 114574..115206
location: region:114574-115206:1
so has part: feature:114574-115206:1:exon
subclass of: SO_0000010

position:114574:1
position: 114574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115206:1
position: 115206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114574-115206:1:exon

PNAP_RS24235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24235
old locus tag: Pnap_4733
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010463583.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutathione S-transferase
translation: MITLYDCATAPSPRRARIFLAEKGVAYETVQVDLRNSEQLSVAYQKINPQCTVPALRTPEGEVLTDNAAITAYLEARYPQPPLLGATPIEKAHIASWNWRVEFEGLLAVAEALRNSAPSMANRALPGQVDYPQIAELAQRGLVRVQQFFSMLNDRLAGSDFIATDSFSVADITAVVAVDFARVVKLKPGEQHPHLQRWRAAMSQRPSMSL
SIO_010081: PNAP_RS24235
subclass of: SO_0000673
so part of: PNAP_RS24235
location: 114574..115206
location: region:114574-115206:1
so has part: feature:114574-115206:1:exon

WP_011798512.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114574-115206:1:exon

PNAP_RS24240
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24240
old locus tag: Pnap_4734
so part of: sequence
location: 115396..115755
location: region:115396-115755:1
so has part: feature:115396-115755:1:exon
subclass of: SO_0000010

position:115396:1
position: 115396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115755:1
position: 115755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115396-115755:1:exon

PNAP_RS24240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24240
old locus tag: Pnap_4734
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSHLEHSPVKAELDRLTMKFFHAVSFEPGEAPSYASIAALFIERGLLIKNVGSAPEISSVQEFIAPREALVSSGTLTRFHESEILGIHRDFRQRGASIQCLREIRHIERKAVQSPRAGR
SIO_010081: PNAP_RS24240
subclass of: SO_0000673
so part of: PNAP_RS24240
location: 115396..115755
location: region:115396-115755:1
so has part: feature:115396-115755:1:exon

WP_011798513.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:115396-115755:1:exon

PNAP_RS24245
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24245
old locus tag: Pnap_4735
so part of: sequence
location: complement(115959..117326)
location: region:115959-117326:-1
so has part: feature:115959-117326:-1:exon
subclass of: SO_0000010

position:115959:-1
position: 115959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117326:-1
position: 117326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115959-117326:-1:exon

PNAP_RS24245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24245
old locus tag: Pnap_4735
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006475990.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ISNCY family transposase
translation: MSMRETDRLKTVQAVVDRMARVGQAAEQLGLSRRQLERLVQRYKHDGVQGLVSRKRGRPSNHQLAPGVAQRALGLIQARYPDFGPTLACEKLIECHGLQLSVETVRALMIAAGLWTPRKQRAAKIYQPRNRRACVGELIQIDGSDHAWFESRSAPCTLLVYIDDATSRLMQLHFVPTESAFAYFEATRAYLEQHGKPVAFYSDKASIFRSVRDSTDFGRGTTQFGRVLFELNIDIWCANSSQAKGRVERANLTLQDRLVKELRLRGINTREAANAFAPHFMADFNARFAKPPKSQFDAHRPVRDDEDLDLLFTWRLQRKVSQSLTLQHDRVIYLLKDTPVNRSLIHRYIDVFEYPDGRIELRADGANLAYERYDRLAQMDTSAIVENKRLSHVLQAVQILQAQRDDRHKSDTPSRTNQGKAPYRQKAQPGTKLSSQFTPEDLELAVLKVCTGTTV
SIO_010081: PNAP_RS24245
subclass of: SO_0000673
so part of: PNAP_RS24245
location: complement(115959..117326)
location: region:115959-117326:-1
so has part: feature:115959-117326:-1:exon

WP_157040256.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:115959-117326:-1:exon

PNAP_RS24250
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24250
old locus tag: Pnap_4736
so part of: sequence
location: complement(117479..117910)
location: region:117479-117910:-1
so has part: feature:117479-117910:-1:exon
subclass of: SO_0000010

position:117479:-1
position: 117479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117910:-1
position: 117910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117479-117910:-1:exon

PNAP_RS24250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24250
old locus tag: Pnap_4736
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798289.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHIRRFLFRLIAYAWAAPNTLLGLAAGLVMLCLGGRLRFVAGVAEFHGGWLGRIVARLPEQVGFGAMTLGHAIVGIDQSTLCVLRAHEHAHVRQYEQWGLFFLPAYALSSLWQVVNGRSAHASNFFERQACAISSQAPSENKL
SIO_010081: PNAP_RS24250
subclass of: SO_0000673
so part of: PNAP_RS24250
location: complement(117479..117910)
location: region:117479-117910:-1
so has part: feature:117479-117910:-1:exon

WP_041377785.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:117479-117910:-1:exon

PNAP_RS24255
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24255
old locus tag: Pnap_4737
so part of: sequence
location: complement(118166..120811)
location: region:118166-120811:-1
so has part: feature:118166-120811:-1:exon
subclass of: SO_0000010

position:118166:-1
position: 118166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120811:-1
position: 120811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118166-120811:-1:exon

PNAP_RS24255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24255
old locus tag: Pnap_4737
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008348329.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: excinuclease ABC subunit UvrA
translation: MNNSLLNNESARQGMVRVRGAREHNLKNVDVDIPRDALVVFTGVSGSGKSSLAFGTLYAEAQRRYFESVSPYARRLIDQVGVPDVDSIEGLPPAVALQQQRGTANARSSVGSVTTISSSVRMLFSRAGTYPPSQPMLYAEDFSPNTVQGACPQCHGLGRVFDVNEKTMVPDDSLTIRERAVAAWPTAWQGQNLRDILVSLGFDVDTPWRDLPAKDREWILFTDEQPTVPVYAGLTPEQTRAALRRNAEPSYQGTFIGARKHVLHTFATTHSALMKKRVSGFMVGSACPLCHGKRLKRESLSVTFAGLDIGELSQLSLDRLALILAPAASGIFDIPEVQVPANLSREEARKDTARRVGAGGSSHAGASDVRRTVNLSPEKRMAAQRMASDLMARITSLQRLGLGYLSIDRATPTLSPGELQRLRLATQIRSNLFGVIYVLDEPSAGLHPADNEAMMEAFEQLKRSGNSVFVVEHDLDMMRCADWLVDVGPAAGEGGGEVLYSGPPAGFEQVHNSQTARYLFGRENELQRTPRTPTDWLALSAVSMNNLAGIDARFPLKAMSAVTGVSGSGKSSLVTQALVQLVRESLGSETPHAEEELDALQDFALPRASGRIASGMEGIKRLVHVDQKPIGRTPRSNLATYTGLFNHVRKLFADTPAARSHDFDVGRFSFNVAKGRCETCEGEGFVSVELLFMPSVYAPCPACHGARFNEDTLQVTLRGKNIADVLHMTVEDAQAFFCNEAVIAKPLKLLSDIGLGYLRLGQPATELSGGEAQRVKLATELQRAQRGDALYVLDEPTTGLHAADVDKLLSQLQGLVDAGNTVIVVEHDMRVIAACDWVIDLGPGGGTAGGKIVASGTPVDVARNGTSLTATYLRKSMARLT
SIO_010081: PNAP_RS24255
subclass of: SO_0000673
so part of: PNAP_RS24255
location: complement(118166..120811)
location: region:118166-120811:-1
so has part: feature:118166-120811:-1:exon

WP_011798516.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:118166-120811:-1:exon

PNAP_RS24260
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24260
old locus tag: Pnap_4738
so part of: sequence
location: complement(121179..122066)
location: region:121179-122066:-1
so has part: feature:121179-122066:-1:exon
subclass of: SO_0000010

position:121179:-1
position: 121179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122066:-1
position: 122066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121179-122066:-1:exon

PNAP_RS24260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24260
old locus tag: Pnap_4738
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019186257.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DMT family transporter
translation: MTSRRLANLLPILAVLGSVTALGIGTSFAKQLFPQVGSLGTTALRVGFSALLLLALWRPWRWPLLRADAVAILKYGVALGFMNLLFYMSLRTIPFGVAVAIEFSGPLAVAMMYSRKPIDFLWLALAVMGLGLLLPLGHSVASLDPEGVMYALAAAVCWGAYIVFGKRLSHLHAGHSVALGLTVAALTVVPFGVWHAGSALLDPRILLFGLAVAAISSAIPISLEMMALKRLPQEAFGIMTSMEPAVAALLGLLMLDEHLAAVQWLAIVFIMLAAAGSSWTARRGQPISAPAEVLM
SIO_010081: PNAP_RS24260
subclass of: SO_0000673
so part of: PNAP_RS24260
location: complement(121179..122066)
location: region:121179-122066:-1
so has part: feature:121179-122066:-1:exon

WP_011798517.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:121179-122066:-1:exon

PNAP_RS26540
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS26540
old locus tag: Pnap_4739
pseudo: true
so part of: sequence
location: complement(122648..>122833)
location: region:122648-122833:-1
so has part: feature:122648-122833:-1:exon
subclass of: SO_0000010

position:122648:-1
position: 122648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122833:-1
position: 122833
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122648-122833:-1:exon

PNAP_RS26540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS26540
old locus tag: Pnap_4739
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018988699.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: lipocalin family protein
SIO_010081: PNAP_RS26540
subclass of: SO_0000673
so part of: PNAP_RS26540
location: complement(122648..>122833)
location: region:122648-122833:-1
so has part: feature:122648-122833:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:122648-122833:-1:exon

PNAP_RS24270
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24270
old locus tag: Pnap_4740
pseudo: true
so part of: sequence
location: 122894..124250
location: region:122894-124250:1
so has part: feature:122894-124250:1:exon
subclass of: SO_0000010

position:122894:1
position: 122894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124250:1
position: 124250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122894-124250:1:exon

PNAP_RS24270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24270
old locus tag: Pnap_4740
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011800013.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS701 family transposase
SIO_010081: PNAP_RS24270
subclass of: SO_0000673
so part of: PNAP_RS24270
location: 122894..124250
location: region:122894-124250:1
so has part: feature:122894-124250:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:122894-124250:1:exon

PNAP_RS26545
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS26545
old locus tag: Pnap_4741
pseudo: true
so part of: sequence
location: <124307..125465
location: region:124307-125465:1
so has part: feature:124307-125465:1:exon
subclass of: SO_0000010

position:124307:1
position: 124307
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:125465:1
position: 125465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124307-125465:1:exon

PNAP_RS26545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS26545
old locus tag: Pnap_4741
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008328818.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: PNAP_RS26545
subclass of: SO_0000673
so part of: PNAP_RS26545
location: <124307..125465
location: region:124307-125465:1
so has part: feature:124307-125465:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:124307-125465:1:exon

PNAP_RS24280
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24280
old locus tag: Pnap_4742
so part of: sequence
location: 125690..126475
location: region:125690-126475:1
so has part: feature:125690-126475:1:exon
subclass of: SO_0000010

position:125690:1
position: 125690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126475:1
position: 126475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125690-126475:1:exon

PNAP_RS24280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24280
old locus tag: Pnap_4742
inference: COORDINATES: protein motif:HMM:NF013757.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IclR family transcriptional regulator
translation: MHTDAETADPLDRQGVKSVEVAGRILEALMARHISVSLKDLSTETRIPAAKLHRYLTSLIRARLVRQDARTRLYQLGAFAMELGAAAMNSSDAMIDAVRRQRVVRDAIDETISLSIWSAKGPIVVNVEESSRSVLLTVRSGTLLPICSTGAGIVFASFLAPHLANALVSNELEAKDPDQEPIVATLDELNELRRTVKQDMFFVNKGHLLSGVMAIATPLFDHAGRVIAVLSVVGRESHFTPEREASVIAQILQFAGHKQGR
SIO_010081: PNAP_RS24280
subclass of: SO_0000673
so part of: PNAP_RS24280
location: 125690..126475
location: region:125690-126475:1
so has part: feature:125690-126475:1:exon

WP_041377786.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:125690-126475:1:exon

PNAP_RS24285
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24285
old locus tag: Pnap_4743
so part of: sequence
location: 126592..127617
location: region:126592-127617:1
so has part: feature:126592-127617:1:exon
subclass of: SO_0000010

position:126592:1
position: 126592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127617:1
position: 127617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126592-127617:1:exon

PNAP_RS24285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24285
old locus tag: Pnap_4743
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020748615.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbon-nitrogen hydrolase family protein
translation: MPKFAKFKAAAVQAAPCFLDTPATMQKVGKLVREAASAGASIVVFPEVFVSGYPYWNWLKNPLDGSAWFQRLYFSAIDVPGPEVEELCRLSRDNNIHIAIGVNERGAKSVGTIYNTNLLFSPEKGLINRQRKLVPTFAEKLSWTAGDAHGLRVSETEIGPIGMLACGENTNTLARFALLAEGELLHIANFVAFPFVSSYDMPSAIKTRIGAHSFEGKVFSIVACSAMSPEIVDAIASNDEERERMSGSPNAFSAIFNPHGVIISDPLVDVEGITYADIDLAECIAPKQYHDILGHYNRFDIFSLQINRTEQSPIRYIGDATEPSGVGASEHETAPAAIPAQ
SIO_010081: PNAP_RS24285
subclass of: SO_0000673
so part of: PNAP_RS24285
location: 126592..127617
location: region:126592-127617:1
so has part: feature:126592-127617:1:exon

WP_011798522.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:126592-127617:1:exon

PNAP_RS24290
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24290
old locus tag: Pnap_4744
so part of: sequence
location: 127717..128835
location: region:127717-128835:1
so has part: feature:127717-128835:1:exon
subclass of: SO_0000010

position:127717:1
position: 127717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128835:1
position: 128835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127717-128835:1:exon

PNAP_RS24290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24290
old locus tag: Pnap_4744
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006390788.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MATTVVHAQEKIRIGFMLPYSGTFAALGVAIENGFKLYVAENGGKLANREVEYFKLDDESDPSKAIQNANRLVQRDKVDVLIGSVHSGVALALTKVAKDNDVTLIVPNAGVGAVTGALCAPNIFRSSYSAWQTAYSMGKVAAQKGKKTAMTITWKYSAGEEQVAAFRQGFEESGGKVLRDLNVPFPNVEFQATLTEAASAKPDAIFAFFAGGAAVKFVQDYAAAGLNRSITLYGSGFLTDGTLQAQGKSAQGILTTLHYGDGLNTPRNNAFRTSYAKTYKLQPDVYAVQGYDAAQMFAAGVKAVGGDVKQKDALRKAIRAARIDSPRGSFVLSKAGNPVQDFYLREAVGNENKVIGIAVKALADPAKGCRML
SIO_010081: PNAP_RS24290
subclass of: SO_0000673
so part of: PNAP_RS24290
location: 127717..128835
location: region:127717-128835:1
so has part: feature:127717-128835:1:exon

WP_232290871.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:127717-128835:1:exon

PNAP_RS24295
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24295
old locus tag: Pnap_4745
so part of: sequence
location: 128937..129800
location: region:128937-129800:1
so has part: feature:128937-129800:1:exon
subclass of: SO_0000010

position:128937:1
position: 128937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129800:1
position: 129800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128937-129800:1:exon

PNAP_RS24295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24295
old locus tag: Pnap_4745
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019575330.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: branched-chain amino acid ABC transporter permease
translation: MDLANFLIQLLNSVQYGLLLFMLAAGLTLIFGIMDVVNLAHGSFYMLGAYLAYSLSGAFDSLLLAILVGTILSVLFGLALERLLFRHFYDRDHLDQVLLTFGLIYIFEELRSILWGDDVHGAKIPDLLSASIPLTETMSYPVYRLFMSGVCIVLAIGLYLLISKTRLGMKIRAGAFNREMTESLGINIKLIHGAVFALGVGLAAIAGMIAAPISSVYPNMGSQVLITCFVVVVIGGIGSVRGALIAALLVGLVDTFGKVLLPQVAGMLVYILMAAVLLWKPEGMFKQ
SIO_010081: PNAP_RS24295
subclass of: SO_0000673
so part of: PNAP_RS24295
location: 128937..129800
location: region:128937-129800:1
so has part: feature:128937-129800:1:exon

WP_011798524.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:128937-129800:1:exon

PNAP_RS24300
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24300
old locus tag: Pnap_4746
so part of: sequence
location: 129850..130872
location: region:129850-130872:1
so has part: feature:129850-130872:1:exon
subclass of: SO_0000010

position:129850:1
position: 129850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130872:1
position: 130872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129850-130872:1:exon

PNAP_RS24300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24300
old locus tag: Pnap_4746
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010465654.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: branched-chain amino acid ABC transporter permease
translation: MAAPKANLETLPRSVQLALMMGLVALAAFPFVSGDYYTEMVTRMMIMAIFAMSLDLLQGVTGLVSLGHAAYFGLAGYALAFLTPESEPVNLWWSLPLAVLASGLAALIVGFFVVRTRGIYFIMVTMAFAQMIYFLFHDNDSLGGSDGLYVNFKPIATLFGWTPFDLDSKVTMYYFTLVLVVAVYAFLRCVLWSPFGRALAGIRVNEHRMRAMGFGTVGYKLTAFTLAGALAGLAGYLTGVQSGYVNPELMGFHMSAHAIMMVILGGMGNFAGAIVGAFAFEYLLHVFKELPQVGSVDLGKHWQLWMGIFIVGLVVLAPRGLLGLFGRLRQSKNAKGDSHE
SIO_010081: PNAP_RS24300
subclass of: SO_0000673
so part of: PNAP_RS24300
location: 129850..130872
location: region:129850-130872:1
so has part: feature:129850-130872:1:exon

WP_011798525.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:129850-130872:1:exon

PNAP_RS24305
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24305
old locus tag: Pnap_4747
so part of: sequence
location: 130865..131626
location: region:130865-131626:1
so has part: feature:130865-131626:1:exon
subclass of: SO_0000010

position:130865:1
position: 130865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131626:1
position: 131626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130865-131626:1:exon

PNAP_RS24305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24305
old locus tag: Pnap_4747
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015014407.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MSEVLLSAKNLTKRYGGLAAVNNVSVDLWTGRVHAVIGPNGAGKSSLTNVLTGDVPLSSGTVTLCGKDVTGWSPEKIARQGMGRSYQKTNIFLPFTVWENVRLASQSRTPQAARWFSDTRGNSAGFSVTTERATRAIELAGLQHRTTAIAGTISHGEQRQLEIAMSLATEPRVLLLDEPLAGMGVAEAERMVELLLKLKKDHAIMLVEHDMDAVFALADQLTVMVDGQVIASGTPAEIRADANVQAAYLGEEH
SIO_010081: PNAP_RS24305
subclass of: SO_0000673
so part of: PNAP_RS24305
location: 130865..131626
location: region:130865-131626:1
so has part: feature:130865-131626:1:exon

WP_011798526.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:130865-131626:1:exon

PNAP_RS24310
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24310
old locus tag: Pnap_4748
so part of: sequence
location: 131719..132432
location: region:131719-132432:1
so has part: feature:131719-132432:1:exon
subclass of: SO_0000010

position:131719:1
position: 131719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132432:1
position: 132432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131719-132432:1:exon

PNAP_RS24310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24310
old locus tag: Pnap_4748
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008905665.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MADMLINAKTLHTYYGASHILRGIDFSVARGESIGLMGRNGMGKSTLLKSIMGLVKPRSGTVEIAGKPMTGRAPYEIATLGVAYVPEGRGIFGNLSVVENLKMAARAGTRGQRDWTYERVLETFPRLTERLGHGGQQLSGGEQQMLTIGRALMTNPDVLILDEATEGLAPLIAREIWRICGVIRESGISSVIVDKNWKHVTQITDRNVILVKGEVVFEGSSAQLTSQPQLLEQYLGV
SIO_010081: PNAP_RS24310
subclass of: SO_0000673
so part of: PNAP_RS24310
location: 131719..132432
location: region:131719-132432:1
so has part: feature:131719-132432:1:exon

WP_011798527.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:131719-132432:1:exon

PNAP_RS24315
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24315
old locus tag: Pnap_4749
so part of: sequence
location: complement(132559..132969)
location: region:132559-132969:-1
so has part: feature:132559-132969:-1:exon
subclass of: SO_0000010

position:132559:-1
position: 132559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132969:-1
position: 132969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132559-132969:-1:exon

PNAP_RS24315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24315
old locus tag: Pnap_4749
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MESPPDSHIQKVYAFTWQSSAIKTVNALRAAGKQEQAAARLAQWLQQHPDDLRAQLFKAETLLADKQFQAAAEQLESTLKQHPKNAVALNNLALAYQQTKDPRAQQAAEEAYKLADPLPHRDGLLQIGTGGGCAPV
SIO_010081: PNAP_RS24315
subclass of: SO_0000673
so part of: PNAP_RS24315
location: complement(132559..132969)
location: region:132559-132969:-1
so has part: feature:132559-132969:-1:exon

WP_011798528.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:132559-132969:-1:exon

PNAP_RS25360
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS25360
old locus tag: Pnap_4750
so part of: sequence
location: complement(133049..133330)
location: region:133049-133330:-1
so has part: feature:133049-133330:-1:exon
subclass of: SO_0000010

position:133049:-1
position: 133049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133330:-1
position: 133330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133049-133330:-1:exon

PNAP_RS25360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS25360
old locus tag: Pnap_4750
inference: COORDINATES: protein motif:HMM:NF024751.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MVMDQAGWHIAQELEVPHNIRLVLLSPYSPEINPAEHIWDALREDCIGNTAFASLEAADKALSKGLRSLESDHERMQSLTGFSWITSISLKAK
SIO_010081: PNAP_RS25360
subclass of: SO_0000673
so part of: PNAP_RS25360
location: complement(133049..133330)
location: region:133049-133330:-1
so has part: feature:133049-133330:-1:exon

WP_011798529.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133049-133330:-1:exon

PNAP_RS26550
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS26550
old locus tag: Pnap_4751
so part of: sequence
location: complement(133591..134115)
location: region:133591-134115:-1
so has part: feature:133591-134115:-1:exon
subclass of: SO_0000010

position:133591:-1
position: 133591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134115:-1
position: 134115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133591-134115:-1:exon

PNAP_RS26550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS26550
old locus tag: Pnap_4751
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011805887.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: winged helix-turn-helix domain-containing protein
translation: MKNLISCDKPTIAALADRLKRANSHAEYQRIQCVLIRATLGSTAAQIAQLLGWSTATVHVIHSRWAKEGDALFDLRGRGGRHHQHLSPAEEGRLLAPFTTKAQAGGLLHVSEIKQAMEEKVGSAVASSTVYRMLDRHGWRKVIPRPRHPKADMQAQDAFKKTPHSGTPRGRAPG
SIO_010081: PNAP_RS26550
subclass of: SO_0000673
so part of: PNAP_RS26550
location: complement(133591..134115)
location: region:133591-134115:-1
so has part: feature:133591-134115:-1:exon

WP_011798530.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133591-134115:-1:exon

PNAP_RS26555
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS26555
pseudo: true
so part of: sequence
location: 134164..>134328
location: region:134164-134328:1
so has part: feature:134164-134328:1:exon
subclass of: SO_0000010

position:134164:1
position: 134164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134328:1
position: 134328
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134164-134328:1:exon

PNAP_RS26555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS26555
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009491816.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: PNAP_RS26555
subclass of: SO_0000673
so part of: PNAP_RS26555
location: 134164..>134328
location: region:134164-134328:1
so has part: feature:134164-134328:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:134164-134328:1:exon

PNAP_RS24325
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24325
old locus tag: Pnap_4752
so part of: sequence
location: complement(134363..135658)
location: region:134363-135658:-1
so has part: feature:134363-135658:-1:exon
subclass of: SO_0000010

position:134363:-1
position: 134363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135658:-1
position: 135658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134363-135658:-1:exon

PNAP_RS24325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24325
old locus tag: Pnap_4752
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798261.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS4 family transposase
translation: MDLGDPRLNRRAVLLAERLGQKPGASIPGACENWAETAAAYRFLRNEQVSFEEVMTAHRQAAMARIREHAVVLCLQDTTELDYNGQAITGLGPLSYEAQRGLYLHPTYVVTPQHEPLGVMNAWTWAREFKTSDAPRGGVLESVRWIESYERIAEQATELPGTRHVCIGDRESDILALLVMARKMNHAADYLVRCQHNRVVPEGGKLWDAVMASTPLGHICFEMPAGRGRKARAVEQEVRAQRVVLPDRQGGELEVTCLIASQVNAPAGAKPVVWRLLTNRTANTLAAAVELVDWYRARWEIELFFLVLKEGCRVERLQLADTERLQTALALYMVIAWRINRLMRLGRTLPNLPADLVFEPDEWRAAFILNKKPVPRQTPTLNTVVRLIAQRGGFLGRKHDGEPGARTIWLGMQEIAVFVEGARYARQFNDG
SIO_010081: PNAP_RS24325
subclass of: SO_0000673
so part of: PNAP_RS24325
location: complement(134363..135658)
location: region:134363-135658:-1
so has part: feature:134363-135658:-1:exon

WP_232290872.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134363-135658:-1:exon

PNAP_RS24330
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24330
old locus tag: Pnap_4753
so part of: sequence
location: complement(135818..136003)
location: region:135818-136003:-1
so has part: feature:135818-136003:-1:exon
subclass of: SO_0000010

position:135818:-1
position: 135818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136003:-1
position: 136003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135818-136003:-1:exon

PNAP_RS24330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24330
old locus tag: Pnap_4753
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018574624.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dodecin family protein
translation: MLELTRSSSVSIEEAVSTAIARAHETVRSIQWFTLTETRGHVVDGKVAHWQVSLKIGFTLE
SIO_010081: PNAP_RS24330
subclass of: SO_0000673
so part of: PNAP_RS24330
location: complement(135818..136003)
location: region:135818-136003:-1
so has part: feature:135818-136003:-1:exon

WP_041377787.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:135818-136003:-1:exon

PNAP_RS24335
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24335
old locus tag: Pnap_4754
pseudo: true
so part of: sequence
location: complement(<136273..137340)
location: region:136273-137340:-1
so has part: feature:136273-137340:-1:exon
subclass of: SO_0000010

position:136273:-1
position: 136273
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:137340:-1
position: 137340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136273-137340:-1:exon

PNAP_RS24335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24335
old locus tag: Pnap_4754
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011617570.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: PLP-dependent aminotransferase family protein
SIO_010081: PNAP_RS24335
subclass of: SO_0000673
so part of: PNAP_RS24335
location: complement(<136273..137340)
location: region:136273-137340:-1
so has part: feature:136273-137340:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:136273-137340:-1:exon

PNAP_RS24340
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24340
old locus tag: Pnap_4755
so part of: sequence
location: 137425..138069
location: region:137425-138069:1
so has part: feature:137425-138069:1:exon
subclass of: SO_0000010

position:137425:1
position: 137425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138069:1
position: 138069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137425-138069:1:exon

PNAP_RS24340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24340
old locus tag: Pnap_4755
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011829634.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FMN-binding negative transcriptional regulator
translation: MYIPDHFAETRPDELGRIIREHPLGMLVTHGSAGLDADHIPFEFDAGVQTPGVLSAHVARANTLWQRCPTGTPVMVVFRGAEAYISPNWYPSKHEAHRQVPTWNYEVVHAHGTITIHEDERFVRRIVARLTRQHEAAEPRPWKMGDAAPEYIDTLLRSIVGIPAMVQLDARFDSLQAVSHDARHEVDGEIHQRAMPGVLDLAQVLEFIEDRFDQ
SIO_010081: PNAP_RS24340
subclass of: SO_0000673
so part of: PNAP_RS24340
location: 137425..138069
location: region:137425-138069:1
so has part: feature:137425-138069:1:exon

WP_157040561.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:137425-138069:1:exon

PNAP_RS24345
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24345
old locus tag: Pnap_4756
pseudo: true
so part of: sequence
location: complement(<137950..138794)
location: region:137950-138794:-1
so has part: feature:137950-138794:-1:exon
subclass of: SO_0000010

position:137950:-1
position: 137950
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:138794:-1
position: 138794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137950-138794:-1:exon

PNAP_RS24345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24345
old locus tag: Pnap_4756
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011112293.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS982 family transposase
SIO_010081: PNAP_RS24345
subclass of: SO_0000673
so part of: PNAP_RS24345
location: complement(<137950..138794)
location: region:137950-138794:-1
so has part: feature:137950-138794:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:137950-138794:-1:exon

PNAP_RS24350
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
gene: mdeB
locus tag: PNAP_RS24350
old locus tag: Pnap_4757
so part of: sequence
location: complement(138953..141619)
location: region:138953-141619:-1
so has part: feature:138953-141619:-1:exon
subclass of: SO_0000010

position:138953:-1
position: 138953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141619:-1
position: 141619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138953-141619:-1:exon

PNAP_RS24350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
gene: mdeB
locus tag: PNAP_RS24350
old locus tag: Pnap_4757
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007863219.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha-ketoglutarate dehydrogenase
translation: MHQQLAPFRSVEPVDPDPAESAEWRDALMSLLQASGPGRTRQILDMLDAMSRDPKIAWQPARGTPYVNTIAVDQQPVFPGDLAMEERLASLVRWNALAMVVRANQAYGELGGHIASYASAADLFETGYNHFFHARCEAPGREHLGDLVFFQPHSSPGVYARAYLEGRLDVEDLSYYRQELSAPAATTGQGPRGLCSYPHPYLMPDFWQFPTGSMGIGPISSIYHARFMRYLTHRQLLDCSARKVWGVFGDGEMDEPESMSALTLAAREKLDNLVWVVNCNLQRLDGPVRGNGRIIDELEQLFAGAGWNVIKLVWGSDWDGLFARDVSGALAKVFANTVDGQMQTFAAKDGRYNRETFFGQNEALAALAQGMTDEQIDRLKRGGHDMVKIYAAYAAAAQHKGQPTVILAHTKKGYGMGSAGQGKMTTHSHKKFDETDLIAFRNRFQLPLTDDQVTSLSFYQPPADSLEMQYLHAQRQKLGGYLPKRYTTCEQVAVPEIASYAQFALKADGKEMSTTMAFVRMLGNLLKDKALGQRIVPIVADEARTFGMANLFKQVGIYSSVGQRYAPEDIGSVLSYREAMDGQILEEGISEAGALASWTAASTSYSVHGLAMLPFYIYYSMFGFQRVGDQIWAAADQRARGFLLGATSGRTTLGGEGLQHQDGTSHLVAATIPNCKAYDPAFAGELAVIIDHGMREMMVEQRDIFYYITMMNENYAQPTLPAGVEHDVIQGCYKFNSYLPMNNEGHAAEISREVTLMGSGAILLEVIKAAQQLALQGISVTVFSVTSWSELAREGQASTQHTPAGKRSESVPFIANMLRASSGPIIAATDYVRAVPESVRAFVPDGRDYLTLGTDGFGRSDTRAALRAFFGVDASSIAQAALTLLAQD
SIO_010081: PNAP_RS24350
subclass of: SO_0000673
so part of: PNAP_RS24350
location: complement(138953..141619)
location: region:138953-141619:-1
so has part: feature:138953-141619:-1:exon

WP_232290868.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:138953-141619:-1:exon

PNAP_RS24355
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24355
old locus tag: Pnap_4758
pseudo: true
so part of: sequence
location: 141753..>141965
location: region:141753-141965:1
so has part: feature:141753-141965:1:exon
subclass of: SO_0000010

position:141753:1
position: 141753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141965:1
position: 141965
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141753-141965:1:exon

PNAP_RS24355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24355
old locus tag: Pnap_4758
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020228336.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: winged helix-turn-helix transcriptional regulator
SIO_010081: PNAP_RS24355
subclass of: SO_0000673
so part of: PNAP_RS24355
location: 141753..>141965
location: region:141753-141965:1
so has part: feature:141753-141965:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:141753-141965:1:exon

PNAP_RS24360
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS24360
old locus tag: Pnap_4759
so part of: sequence
location: complement(142059..142523)
location: region:142059-142523:-1
so has part: feature:142059-142523:-1:exon
subclass of: SO_0000010

position:142059:-1
position: 142059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142523:-1
position: 142523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142059-142523:-1:exon

PNAP_RS24360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS24360
old locus tag: Pnap_4759
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798536.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Lrp/AsnC family transcriptional regulator
translation: MEITLDRIDRKLLKLLQQDASLPNIDLAEKTNLSPPACSRRIAKLKELGLIRKTVALVNPRALGYNGLVIIGVVLDRSTAESFTAFEKAAAALTGCLEVQLVTGEFDYFIKLRIRGIDSFNEMHSAQLVSLPGVRQVRTFVCLKEVFETTAIPV
SIO_010081: PNAP_RS24360
subclass of: SO_0000673
so part of: PNAP_RS24360
location: complement(142059..142523)
location: region:142059-142523:-1
so has part: feature:142059-142523:-1:exon

WP_011798536.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:142059-142523:-1:exon