Polaromonas naphthalenivorans CJ2 plasmid pPNAP03, complete sequence.
type: Entry
definition: Polaromonas naphthalenivorans CJ2 plasmid pPNAP03, complete sequence.
sequence version: NC_008759.1
sequence date: 2022-12-28
sequence: sequence
division: CON
label: NC_008759.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02598302
keyword: RefSeq
source: Polaromonas naphthalenivorans CJ2
organism: Polaromonas naphthalenivorans CJ2
taxonomy: Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP000532.1.\nURL -- http://www.jgi.doe.gov\nJGI Project ID: 4000361\nSource DNA and bacteria available from Eugene L. Madsen\n(elm3@cornell.edu)\nContacts: Eugene L. Madsen (elm3@cornell.edu)\n Paul Richardson (microbes@cuba.jgi-psf.org)\nQuality assurance done by JGI-Stanford\nAnnotation done by JGI-ORNL and JGI-PGF\nFinishing done by JGI-LANL\nFinished microbial genomes have been curated to close all gaps with\ngreater than 98% coverage of at least two independent clones. Each\nbase pair has a minimum q (quality) value of 30 and the total error\nrate is less than one per 50000.\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. It is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/28/2022 02:04:21\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,174\nCDSs (total) :: 5,114\nGenes (coding) :: 4,993\nCDSs (with protein) :: 4,993\nGenes (RNA) :: 60\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 51\nncRNAs :: 3\nPseudo Genes (total) :: 121\nCDSs (without protein) :: 121\nPseudo Genes (ambiguous residues) :: 0 of 121\nPseudo Genes (frameshifted) :: 42 of 121\nPseudo Genes (incomplete) :: 93 of 121\nPse…

sequence
subclass of: SO_0000155
sequence length: 171866
topology: circular
so has quality: SO_0000988
location: 1..171866
location: region:1-171866:1
RO_0002162: 365044

NC_008759
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02598302
type: BioSample
SIO_000068: biosample

1
title: Complete sequence of plasmid pPNAP03 of Polaromonas naphthalenivorans CJ2
author: Copeland, A.
author: Lucas, S.
author: Lapidus, A.
author: Barry, K.
author: Detter, J.C.
author: Glavina del Rio, T.
author: Hammon, N.
author: Israni, S.
author: Dalin, E.
author: Tice, H.
author: Pitluck, S.
author: Sims, D.R.
author: Brettin, T.
author: Bruce, D.
author: Han, C.
author: Tapia, R.
author: Brainard, J.
author: Schmutz, J.
author: Larimer, F.
author: Land, M.
author: Hauser, L.
author: Kyrpides, N.
author: Kim, E.
author: Madsen, E.L.
author: Richardson, P.
journal: Unpublished

2
title: Direct Submission
author: Copeland, A.
author: Lucas, S.
author: Lapidus, A.
author: Barry, K.
author: Detter, J.C.
author: Glavina del Rio, T.
author: Hammon, N.
author: Israni, S.
author: Dalin, E.
author: Tice, H.
author: Pitluck, S.
author: Sims, D.R.
author: Brettin, T.
author: Bruce, D.
author: Han, C.
author: Tapia, R.
author: Brainard, J.
author: Schmutz, J.
author: Larimer, F.
author: Land, M.
author: Hauser, L.
author: Kyrpides, N.
author: Kim, E.
author: Madsen, E.L.
author: Richardson, P.
journal: Submitted (21-DEC-2006) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171866:1
position: 171866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-171866:1:source
so part of: sequence
organism: Polaromonas naphthalenivorans CJ2
mol type: genomic DNA
strain: CJ2
type material: type strain of Polaromonas naphthalenivorans
plasmid: pPNAP03

365044
type: Taxonomy
SIO_000068: taxonomy

PNAP_RS22890
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS22890
old locus tag: Pnap_4972
so part of: sequence
location: join(170806..171866,1..184)
location: region:1-171866:1
so has part: feature:170806-171866:1:exon
so has part: feature:1-184:1:exon
subclass of: SO_0000010

urn:…
SIO_000300: 1
SIO_000628: feature:170806-171866:1:exon

position:170806:1
position: 170806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-184:1:exon

position:184:1
position: 184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PNAP_RS22890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS22890
old locus tag: Pnap_4972
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAQKFPVPPFPSAGELVYEICIRSGLVPTNDKDPLYNELKSFKDERKRPALRPIRFPKHVLVDVEKRLAGFIKSEMHAFLIFGAARQFFEMYGALIVTTDATLFSRKQFEELVLWPSVFASMSAIFLEIFSGIFPGVDANELLNHPAPLSLHLRIICKNGPADFKAICHFRAEKYNIQSDNCRSTLDDWLNGEAVPRLENCQDILDAMNLGNDTSSLVWMLTARLLSKTAPHHREQILYHLKPENGLPELHELFRGLKRSAAWELGEKLNIGPDRPYAKLREALFNPTVPRDGAAVDDMIARQVKTWEPIAENTMHEIEWFRGRYLVLCGKPEQAYEHYLTAYNLGAGRDPNIYREVIDEALALAGKLGNKKGIRRFSKLLHMHWTTEWDGEEASLPEHFERKFPKSLHYPIYT
SIO_010081: PNAP_RS22890
subclass of: SO_0000673
so part of: PNAP_RS22890
location: join(170806..171866,1..184)
location: region:1-171866:1
so has part: feature:170806-171866:1:exon
so has part: feature:1-184:1:exon

WP_041377704.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:170806-171866:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-184:1:exon

PNAP_RS22895
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS22895
old locus tag: Pnap_4813
so part of: sequence
location: complement(508..1071)
location: region:508-1071:-1
so has part: feature:508-1071:-1:exon
subclass of: SO_0000010

position:508:-1
position: 508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1071:-1
position: 1071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:508-1071:-1:exon

PNAP_RS22895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS22895
old locus tag: Pnap_4813
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNNSTSSTGQSGDPSELWWQSVTLAELEEATAVIDEFTRESSTPPPAVSPERFARAIVLRMLCIDAGVVDALIAHADEKSFTLVNRLQLDADSQNSGIDAYESWLMRRHDIGTGLKTCVTLLASPLRQAIDAKVEGFIRTTMEHQNIFFSILFGRGLQKPLAVPLRASFRSPAAHAPGNSTGHQSLK
SIO_010081: PNAP_RS22895
subclass of: SO_0000673
so part of: PNAP_RS22895
location: complement(508..1071)
location: region:508-1071:-1
so has part: feature:508-1071:-1:exon

WP_011798249.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:508-1071:-1:exon

PNAP_RS22900
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS22900
old locus tag: Pnap_4814
so part of: sequence
location: complement(1068..2294)
location: region:1068-2294:-1
so has part: feature:1068-2294:-1:exon
subclass of: SO_0000010

position:1068:-1
position: 1068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2294:-1
position: 2294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1068-2294:-1:exon

PNAP_RS22900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS22900
old locus tag: Pnap_4814
inference: COORDINATES: protein motif:HMM:NF021508.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2235 domain-containing protein
translation: MFIDGTWDQPNGAMDTNVRKLFEASRFEPFSPAPQLTYYLPGVGTDISQSEPGAPVGSYGGYIDFKQKLAKEMPSSVLLLRPFLGGIFGRGTAARIKEAYAYLSWEYDQRRGDKVFLFGFSRGAFAARSLAGFISKVGILLRHKLQYVEEAYKLYEAASDGTQSRLTDYLVPLTGKPLLQSGESEDALRIHFIGVWDTVGALGIPWRLMKFKAMHTEYHQTQVPPNVMTARHALALHELRKPFHPMLWSDPNGHSGLRQAWFPGAHADVGGGYLLHESGLSNNALKWMTREAQAKGLQMEATTKWLNEQTSPEMLHHQIRKWFIGFRPRVRPQLQVLHDAFSGDASELSNAMFFHESTRLHLLNPAARKYKFFRPGVNDCLQQADELALQLFVKSRLMGHEPLGQVEP
SIO_010081: PNAP_RS22900
subclass of: SO_0000673
so part of: PNAP_RS22900
location: complement(1068..2294)
location: region:1068-2294:-1
so has part: feature:1068-2294:-1:exon

WP_198140740.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1068-2294:-1:exon

PNAP_RS22905
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS22905
old locus tag: Pnap_4815
so part of: sequence
location: complement(2427..2984)
location: region:2427-2984:-1
so has part: feature:2427-2984:-1:exon
subclass of: SO_0000010

position:2427:-1
position: 2427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2984:-1
position: 2984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2427-2984:-1:exon

PNAP_RS22905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS22905
old locus tag: Pnap_4815
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016516133.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTRLFIACKQKVHNRGRPPDSFLNELADWGKTAPPEVFAKNEKFDIYSSVIQQLGPWQGEVHRRGVMLEVLRVLGGFESSWNWNAGIDITNPTSNTPCSEEAGIFQCSGNSMTFSPTLKALLLSTGADGSCSSFITTTKLNHAFAIEYCARLLRFTTKHHGPIKGMHIHPWLRRDAVQEFETLLA
SIO_010081: PNAP_RS22905
subclass of: SO_0000673
so part of: PNAP_RS22905
location: complement(2427..2984)
location: region:2427-2984:-1
so has part: feature:2427-2984:-1:exon

WP_011798251.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2427-2984:-1:exon

PNAP_RS22910
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
gene: map
locus tag: PNAP_RS22910
old locus tag: Pnap_4816
so part of: sequence
location: complement(3338..4129)
location: region:3338-4129:-1
so has part: feature:3338-4129:-1:exon
subclass of: SO_0000010

position:3338:-1
position: 3338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4129:-1
position: 4129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3338-4129:-1:exon

PNAP_RS22910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
gene: map
locus tag: PNAP_RS22910
old locus tag: Pnap_4816
EC number: 3.4.11.18
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011463173.1
GO process: GO:0036211 - protein modification process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I methionyl aminopeptidase
translation: MARGVPIKSAEELEMARRAGQLAAEVLGMVEAYVVPGLSTQTLDRICHDHIVNIQGAIPANLGYHGYPKTILTSVNQVVCHGIPSPDKILKKGDIINIDVAVIKDGWFGDTSRMYFVGAPSVLARRLVATTYEALLAGIGQVKPGATLGDIGHAIQSVAHREHFSVVREYCGHGIGQVYHDEPNVLHYGRRGEGLKLEAGMVFTIEPMLNAGKRETRQLPDGWTVVTKDRSLSAQWEHMVAVTPGGYEVLTPWPGGTGAYAPV
SIO_010081: PNAP_RS22910
subclass of: SO_0000673
so part of: PNAP_RS22910
location: complement(3338..4129)
location: region:3338-4129:-1
so has part: feature:3338-4129:-1:exon

WP_011798252.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3338-4129:-1:exon

PNAP_RS22915
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS22915
old locus tag: Pnap_4817
so part of: sequence
location: complement(4129..4383)
location: region:4129-4383:-1
so has part: feature:4129-4383:-1:exon
subclass of: SO_0000010

position:4383:-1
position: 4383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4129-4383:-1:exon

PNAP_RS22915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS22915
old locus tag: Pnap_4817
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015865805.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParD-like family protein
translation: MGIVKISDLMHENLRVAGNALSRSINAQAEHWMRVGMLTEMHPELDHREICQLLIRAELAGGLDIAMAVTAQLDKPRAASTGKH
SIO_010081: PNAP_RS22915
subclass of: SO_0000673
so part of: PNAP_RS22915
location: complement(4129..4383)
location: region:4129-4383:-1
so has part: feature:4129-4383:-1:exon

WP_011798253.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4129-4383:-1:exon

PNAP_RS22920
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS22920
old locus tag: Pnap_4818
so part of: sequence
location: complement(4526..5320)
location: region:4526-5320:-1
so has part: feature:4526-5320:-1:exon
subclass of: SO_0000010

position:4526:-1
position: 4526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5320:-1
position: 5320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4526-5320:-1:exon

PNAP_RS22920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS22920
old locus tag: Pnap_4818
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKSIQNTTPTGLPRDEYGALYTSQVLSQEQQLQLKDLLGKAVATGIVPEPFITSNKKEIDCLNLDIFDVLVFRGKVKGLVVQARSFWKNIRKGYTRIQKSYFLVMRSGKKLDIKELENSTCVKRAKNTAALGQLVNHYLGKTTVACKSGAKVAAWTGYKVLARDQKGSLVSAFDGSAYVPGIWREETATAGHRGGFYYYGDKEIAVTTTRSGATFAKSVSEGKSLVLCKVECAGKQVGYTGGKWAVSRLRVIEELEAVTLDVGT
SIO_010081: PNAP_RS22920
subclass of: SO_0000673
so part of: PNAP_RS22920
location: complement(4526..5320)
location: region:4526-5320:-1
so has part: feature:4526-5320:-1:exon

WP_011798254.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4526-5320:-1:exon

PNAP_RS22925
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS22925
old locus tag: Pnap_4819
so part of: sequence
location: 5468..5764
location: region:5468-5764:1
so has part: feature:5468-5764:1:exon
subclass of: SO_0000010

position:5468:1
position: 5468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5764:1
position: 5764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5468-5764:1:exon

PNAP_RS22925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS22925
old locus tag: Pnap_4819
inference: COORDINATES: protein motif:HMM:NF024736.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MTHARHTFTDAQWQRIEPFMPPCKGRHGGAHRAFFDALLWMARTGAPWRDLPERLGTWSVVYQRYAYWCDKGHFERLFQGVQQPDMEEVMADSTCCRA
SIO_010081: PNAP_RS22925
subclass of: SO_0000673
so part of: PNAP_RS22925
location: 5468..5764
location: region:5468-5764:1
so has part: feature:5468-5764:1:exon

WP_198140741.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5468-5764:1:exon

PNAP_RS22930
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS22930
old locus tag: Pnap_4820
pseudo: true
so part of: sequence
location: <5778..6194
location: region:5778-6194:1
so has part: feature:5778-6194:1:exon
subclass of: SO_0000010

position:5778:1
position: 5778
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:6194:1
position: 6194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5778-6194:1:exon

PNAP_RS22930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS22930
old locus tag: Pnap_4820
inference: COORDINATES: protein motif:HMM:NF033580.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: PNAP_RS22930
subclass of: SO_0000673
so part of: PNAP_RS22930
location: <5778..6194
location: region:5778-6194:1
so has part: feature:5778-6194:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5778-6194:1:exon

PNAP_RS22935
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS22935
old locus tag: Pnap_4821
pseudo: true
so part of: sequence
location: <6225..6782
location: region:6225-6782:1
so has part: feature:6225-6782:1:exon
subclass of: SO_0000010

position:6225:1
position: 6225
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:6782:1
position: 6782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6225-6782:1:exon

PNAP_RS22935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS22935
old locus tag: Pnap_4821
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013690437.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: PNAP_RS22935
subclass of: SO_0000673
so part of: PNAP_RS22935
location: <6225..6782
location: region:6225-6782:1
so has part: feature:6225-6782:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6225-6782:1:exon

PNAP_RS26340
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS26340
old locus tag: Pnap_4822
so part of: sequence
location: 7040..7771
location: region:7040-7771:1
so has part: feature:7040-7771:1:exon
subclass of: SO_0000010

position:7040:1
position: 7040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7771:1
position: 7771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7040-7771:1:exon

PNAP_RS26340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS26340
old locus tag: Pnap_4822
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAIASWSLYALRQLDAIKRPSMQIQETAAVQKYEVPSRANQSSAFFPARLISPMEAKIAFKHRPSEAGSWTSEKWHLYGGVRSELFAMLNAEFRNAIAVRLTTYCTPAGGNYAVISHQLFGCAHRFVLPLYEPTVQAMLLELHETSELVFLFGNEQEKDAALVRSPLRRAAFAPLLAMTNPRPKQPLHRAIDELFLVISAMNQPKQVPSLRRGEKVEDVSVSIALPFHAMAQLCSEKSKETIQ
SIO_010081: PNAP_RS26340
subclass of: SO_0000673
so part of: PNAP_RS26340
location: 7040..7771
location: region:7040-7771:1
so has part: feature:7040-7771:1:exon

WP_011798258.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7040-7771:1:exon

PNAP_RS22945
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS22945
old locus tag: Pnap_4823
so part of: sequence
location: 7768..8064
location: region:7768-8064:1
so has part: feature:7768-8064:1:exon
subclass of: SO_0000010

position:7768:1
position: 7768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8064:1
position: 8064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7768-8064:1:exon

PNAP_RS22945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS22945
old locus tag: Pnap_4823
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTRRRKVKPVKTAKTLYGAFVQETQELILVIEAASEEEAGPRIEAVLPMFGVIDACGLGFIQVNSCPLGVAHFLDAFFEGTGLGAVRDSVAPSTNTRH
SIO_010081: PNAP_RS22945
subclass of: SO_0000673
so part of: PNAP_RS22945
location: 7768..8064
location: region:7768-8064:1
so has part: feature:7768-8064:1:exon

WP_011798259.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7768-8064:1:exon

PNAP_RS26345
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS26345
old locus tag: Pnap_4824
so part of: sequence
location: 8116..8490
location: region:8116-8490:1
so has part: feature:8116-8490:1:exon
subclass of: SO_0000010

position:8116:1
position: 8116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8490:1
position: 8490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8116-8490:1:exon

PNAP_RS26345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS26345
old locus tag: Pnap_4824
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAASAVHQSAASCAFLNLQEATGPISLRCLLHRKGRAWLSRSNAPAAKVACLCYKNYMNSFLTRATQELKRTFGVVEAEVAQGEKDVTSNERQVEATVLALVPEYHLVKVIPLHTSHPSLNCRA
SIO_010081: PNAP_RS26345
subclass of: SO_0000673
so part of: PNAP_RS26345
location: 8116..8490
location: region:8116-8490:1
so has part: feature:8116-8490:1:exon

WP_157040518.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8116-8490:1:exon

PNAP_RS22950
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS22950
old locus tag: Pnap_4825
so part of: sequence
location: complement(8463..9788)
location: region:8463-9788:-1
so has part: feature:8463-9788:-1:exon
subclass of: SO_0000010

position:8463:-1
position: 8463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9788:-1
position: 9788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8463-9788:-1:exon

PNAP_RS22950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS22950
old locus tag: Pnap_4825
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798261.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS4 family transposase
translation: MGWAEQEFETIDLGDPRLNRRAVLLAERLGQKPGASIPGACENWAETAAAYRFLRNEQVSFEEVMTAHRQAAMARIREHAVVLCLQDTTELDYNGQAITGLGPLSYEAQRGLYLHPTYVVTPQREPLGVMNAWTWAREFKTSDAPRGGVLESVRWIESYERIAEQATELPGTRHVCIGDRESDILALLVMARKMNHAADYLVRCQHNRVVPEGGKLWDAVMASTPLGHIRFEMPAGRGRKARAVEQEVRAQRVVLPDRQGGELEVTCLIASQVNAPAGAKPVVWRLLTNRTANTLAAAVELVDWYRARWEIELFFLVLKEGCRVERLQLADTERLQTALALYMVIAWRINRLMRLGRTLPNLPADLVFEPDEWRAAFILNKKPVPRQTPTLNTVVRLIAQRGGFLGRKHDGEPGARTIWLGMQEIAVFVEGARYARQFNDG
SIO_010081: PNAP_RS22950
subclass of: SO_0000673
so part of: PNAP_RS22950
location: complement(8463..9788)
location: region:8463-9788:-1
so has part: feature:8463-9788:-1:exon

WP_011798261.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8463-9788:-1:exon

PNAP_RS26350
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS26350
old locus tag: Pnap_4826
so part of: sequence
location: complement(10686..11291)
location: region:10686-11291:-1
so has part: feature:10686-11291:-1:exon
subclass of: SO_0000010

position:10686:-1
position: 10686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11291:-1
position: 11291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10686-11291:-1:exon

PNAP_RS26350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS26350
old locus tag: Pnap_4826
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNHSPAVNTSHDLGSYPRNREGELTTFDFLSPTEFKEVEALQEGAIQGGGLPTPYYTLNKRKQLEGINLSILDVHLTGGKVNGLIIRAKEYVMNLETGGTRRAQRFFLVTRLDAGVEVRGLGCRKCAKRAKGTVGLGLLTRRYMQSINQAPEATAVMSKSPILLEDKSIPTLRSYPARSAIPREGICREFIMSWARAERNA
SIO_010081: PNAP_RS26350
subclass of: SO_0000673
so part of: PNAP_RS26350
location: complement(10686..11291)
location: region:10686-11291:-1
so has part: feature:10686-11291:-1:exon

WP_011798262.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10686-11291:-1:exon

PNAP_RS22965
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS22965
old locus tag: Pnap_4827
so part of: sequence
location: 11489..12142
location: region:11489-12142:1
so has part: feature:11489-12142:1:exon
subclass of: SO_0000010

position:11489:1
position: 11489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12142:1
position: 12142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11489-12142:1:exon

PNAP_RS22965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS22965
old locus tag: Pnap_4827
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHIKKRGLRAMLYRSAWIKKGAEGNTHGFARQSFVASLPVNSIAIPGKLAALLSAEEAEYVDKNLLMPARLAAEACRVQAEHERRDPVRRLDEAAKLVREAAALSADAVVPQGRIKAIADALATVRSLGGSTLSSAPRQEAQKADPLVEALKAIRAAAQAVRDGHYGHAPIDGARRSKPYELWMEISRDIDGTSGPDGLLRALQGCGWVKVRGAVAR
SIO_010081: PNAP_RS22965
subclass of: SO_0000673
so part of: PNAP_RS22965
location: 11489..12142
location: region:11489-12142:1
so has part: feature:11489-12142:1:exon

WP_041377708.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11489-12142:1:exon

PNAP_RS22970
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS22970
old locus tag: Pnap_4828
so part of: sequence
location: 12347..13003
location: region:12347-13003:1
so has part: feature:12347-13003:1:exon
subclass of: SO_0000010

position:12347:1
position: 12347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13003:1
position: 13003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12347-13003:1:exon

PNAP_RS22970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS22970
old locus tag: Pnap_4828
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNQVNGAGAHPDNGQKILHGHLNVSDSQFPETAAERVMRLCRFGGGALTGWLFDEARLRQQELPEMARELGVTSGYINQLRTGIRLPEHISHEFAVACGRYLVVPAIVVKLISGSIRISDFAFPYESEEQVLDRALRVIQADPQLRSALPGELMSLPLDVKKMMVMMYAETSAQDVFGLHELPEILRWLQRAAVLHCENEYEVVVGHRDTSALYEDAD
SIO_010081: PNAP_RS22970
subclass of: SO_0000673
so part of: PNAP_RS22970
location: 12347..13003
location: region:12347-13003:1
so has part: feature:12347-13003:1:exon

WP_011798264.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12347-13003:1:exon

PNAP_RS27790
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS27790
so part of: sequence
location: 13236..13469
location: region:13236-13469:1
so has part: feature:13236-13469:1:exon
subclass of: SO_0000010

position:13236:1
position: 13236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13469:1
position: 13469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13236-13469:1:exon

PNAP_RS27790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS27790
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013104709.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DeoR family transcriptional regulator
translation: MLQKFNLIESRTDSHRLLDLEELAGLLGRSPQTIRKDLSRKPEAVPPRLQLPGTRLLRWRLVDVTDWLALHVEGAGK
SIO_010081: PNAP_RS27790
subclass of: SO_0000673
so part of: PNAP_RS27790
location: 13236..13469
location: region:13236-13469:1
so has part: feature:13236-13469:1:exon

WP_232290863.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13236-13469:1:exon

PNAP_RS25280
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS25280
old locus tag: Pnap_4830
so part of: sequence
location: 13466..14689
location: region:13466-14689:1
so has part: feature:13466-14689:1:exon
subclass of: SO_0000010

position:13466:1
position: 13466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14689:1
position: 14689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13466-14689:1:exon

PNAP_RS25280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS25280
old locus tag: Pnap_4830
inference: COORDINATES: protein motif:HMM:NF024872.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helicase RepA family protein
translation: MNNSNQAAVPRYPDVWPKGQVSYLPKLVASTSSKPFGGLKTSFTSVPAATKPSSRYVILEASELRKEPVEWVLKGVFLQKGVGMIYGASGAGKSFLTLDLAAAIAEGRPWFGCRTRNAPVIYVCLEGSAGFMGRVKAWEVAHGRSLTKLMGFIFEPFSLLNPQCVHELVSAIMEFVKTVPAGLGTPVVVVDTLNRAMPGAQENGSSDMGTALQACAVISAATGGLTLLVHHTGKDADRGPRGHSSLKGALDGALLVVRSAKGRFWKSEKVKDGPDDLLFDFELEQVTLGLDADGDEVSSCVVRSTLNTAGPIKAPAMATSVKTALLSLQAVLTQTRAAANSEESCIVSLKDWREVLYTNTAAQSPSGKRNALNRALNELQGLGYVNVNGKFLEVNPAALEFLSQLSN
SIO_010081: PNAP_RS25280
subclass of: SO_0000673
so part of: PNAP_RS25280
location: 13466..14689
location: region:13466-14689:1
so has part: feature:13466-14689:1:exon

WP_011798266.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13466-14689:1:exon

PNAP_RS22985
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS22985
old locus tag: Pnap_4831
pseudo: true
so part of: sequence
location: complement(15265..16102)
location: region:15265-16102:-1
so has part: feature:15265-16102:-1:exon
subclass of: SO_0000010

position:15265:-1
position: 15265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16102:-1
position: 16102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15265-16102:-1:exon

PNAP_RS22985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS22985
old locus tag: Pnap_4831
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019920524.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: NAD-dependent deacetylase
SIO_010081: PNAP_RS22985
subclass of: SO_0000673
so part of: PNAP_RS22985
location: complement(15265..16102)
location: region:15265-16102:-1
so has part: feature:15265-16102:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15265-16102:-1:exon

PNAP_RS22990
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS22990
old locus tag: Pnap_4832
so part of: sequence
location: complement(16723..17220)
location: region:16723-17220:-1
so has part: feature:16723-17220:-1:exon
subclass of: SO_0000010

position:16723:-1
position: 16723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17220:-1
position: 17220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16723-17220:-1:exon

PNAP_RS22990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS22990
old locus tag: Pnap_4832
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009548459.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPAISKSALADAITAVGKMDNRQRELLADDIHAHQPQLLASVLAQQQFGASLEQIEVLLKVLLVSYRAMENSGHVWPVVSEEMQERCFARFAGKIRFLEGLTHEQKATVISDAVTDHNEKWLLAFVFDELQAHDLLVINTDAKKFLVLCALGMVECVAEAASHSV
SIO_010081: PNAP_RS22990
subclass of: SO_0000673
so part of: PNAP_RS22990
location: complement(16723..17220)
location: region:16723-17220:-1
so has part: feature:16723-17220:-1:exon

WP_011798268.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16723-17220:-1:exon

PNAP_RS22995
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS22995
old locus tag: Pnap_4833
so part of: sequence
location: 18125..18871
location: region:18125-18871:1
so has part: feature:18125-18871:1:exon
subclass of: SO_0000010

position:18125:1
position: 18125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18871:1
position: 18871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18125-18871:1:exon

PNAP_RS22995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS22995
old locus tag: Pnap_4833
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPFFRFFHFHSQFCSIAKPCGLRSPALVAAVEESMRMNFERKFARQWRLMNSPVFGALAWVLALLVHHRTGFGKFRDKGAGGPQAGAQFSTTDAKEALQFSKAANSPQDVPREGPESPPNVDLQDGLASASFISGGVWAIESIEQTPELMLDSWQCFELQLPRLTYRTRHLAGSNVRNWHGQVSSAIVAMDPATRRCTTKSGRVYELGERNGLIGDGQYTWGQWLRINQPSDIVDVTDEIKKMLAGHP
SIO_010081: PNAP_RS22995
subclass of: SO_0000673
so part of: PNAP_RS22995
location: 18125..18871
location: region:18125-18871:1
so has part: feature:18125-18871:1:exon

WP_011798269.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18125-18871:1:exon

PNAP_RS23000
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23000
old locus tag: Pnap_4834
so part of: sequence
location: 18868..19368
location: region:18868-19368:1
so has part: feature:18868-19368:1:exon
subclass of: SO_0000010

position:18868:1
position: 18868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19368:1
position: 19368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18868-19368:1:exon

PNAP_RS23000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23000
old locus tag: Pnap_4834
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018418976.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAD domain-containing protein
translation: MKGRGGLVLYADYDGVLHHENVLWHPKIGAYMSAPDGYVLFQHAELLERMLAPYPEVQIVLSTSWVRRYGCARAAKQLRPALRARVIGATFHSRMNELEFAEKPRGLQVWEDVLKRRPRGWLALDDDWVDWPEWCLAHYVKTHPREGLSDPAVQEEFARKLQEICK
SIO_010081: PNAP_RS23000
subclass of: SO_0000673
so part of: PNAP_RS23000
location: 18868..19368
location: region:18868-19368:1
so has part: feature:18868-19368:1:exon

WP_011798270.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18868-19368:1:exon

PNAP_RS23005
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23005
old locus tag: Pnap_4835
so part of: sequence
location: 19365..19685
location: region:19365-19685:1
so has part: feature:19365-19685:1:exon
subclass of: SO_0000010

position:19365:1
position: 19365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19685:1
position: 19685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19365-19685:1:exon

PNAP_RS23005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23005
old locus tag: Pnap_4835
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTRIQIAENFLHDAVNNEMSPQSREDCAFNAGYLFALEAIPSSFTGKLEHPNVLVITVAARYLCLDMAVMEPAFKFIREQYSLGRDGRNVDALMAWALLMKKAVSK
SIO_010081: PNAP_RS23005
subclass of: SO_0000673
so part of: PNAP_RS23005
location: 19365..19685
location: region:19365-19685:1
so has part: feature:19365-19685:1:exon

WP_011798271.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19365-19685:1:exon

PNAP_RS23010
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23010
old locus tag: Pnap_4836
so part of: sequence
location: 19682..19996
location: region:19682-19996:1
so has part: feature:19682-19996:1:exon
subclass of: SO_0000010

position:19682:1
position: 19682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19996:1
position: 19996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19682-19996:1:exon

PNAP_RS23010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23010
old locus tag: Pnap_4836
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSDKDKSPKDPTEEGERVLRTFAKISDPSNAHLFKADAARKAFEKVELPSKDEEEELAQVRKQLDAAIRVLQHRERRMTKIVRGLALGGLASFVLAVLAMVLMR
SIO_010081: PNAP_RS23010
subclass of: SO_0000673
so part of: PNAP_RS23010
location: 19682..19996
location: region:19682-19996:1
so has part: feature:19682-19996:1:exon

WP_011798272.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19682-19996:1:exon

PNAP_RS23015
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23015
old locus tag: Pnap_4837
so part of: sequence
location: 20070..20303
location: region:20070-20303:1
so has part: feature:20070-20303:1:exon
subclass of: SO_0000010

position:20070:1
position: 20070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20303:1
position: 20303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20070-20303:1:exon

PNAP_RS23015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23015
old locus tag: Pnap_4837
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTRITKELDAWPESNEEMLVLIESFDRLQKKHVREYVLKLCVFSVPTTQAEIDAVLKAGDKLAIAAALHARKLDFWD
SIO_010081: PNAP_RS23015
subclass of: SO_0000673
so part of: PNAP_RS23015
location: 20070..20303
location: region:20070-20303:1
so has part: feature:20070-20303:1:exon

WP_041377710.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20070-20303:1:exon

PNAP_RS26360
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS26360
old locus tag: Pnap_4838
so part of: sequence
location: 20392..20631
location: region:20392-20631:1
so has part: feature:20392-20631:1:exon
subclass of: SO_0000010

position:20392:1
position: 20392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20631:1
position: 20631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20392-20631:1:exon

PNAP_RS26360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS26360
old locus tag: Pnap_4838
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNQYKCHNCGWVHAVIPLVQAEAAVLAANEYYLSKGLAPTETLESYLKCVRCGASSDKFLPARPSDVPFGTTIDTVVMP
SIO_010081: PNAP_RS26360
subclass of: SO_0000673
so part of: PNAP_RS26360
location: 20392..20631
location: region:20392-20631:1
so has part: feature:20392-20631:1:exon

WP_011798274.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20392-20631:1:exon

PNAP_RS28190
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS28190
so part of: sequence
location: 20755..20889
location: region:20755-20889:1
so has part: feature:20755-20889:1:exon
subclass of: SO_0000010

position:20755:1
position: 20755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20889:1
position: 20889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20755-20889:1:exon

PNAP_RS28190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS28190
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNRFITALLQDEERSKTVLAAVAVIAGLLAIALAAALNMKLIST
SIO_010081: PNAP_RS28190
subclass of: SO_0000673
so part of: PNAP_RS28190
location: 20755..20889
location: region:20755-20889:1
so has part: feature:20755-20889:1:exon

WP_269667369.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20755-20889:1:exon

PNAP_RS23025
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23025
old locus tag: Pnap_4840
so part of: sequence
location: 20886..21182
location: region:20886-21182:1
so has part: feature:20886-21182:1:exon
subclass of: SO_0000010

position:20886:1
position: 20886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21182:1
position: 21182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20886-21182:1:exon

PNAP_RS23025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23025
old locus tag: Pnap_4840
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTKLHYDFTLRFKLSGQDGAASQVVERLGEGGCRDALVGTGVPGQIAMHFTRCASTELEAIQSAIDDVLKALPGAALLSNAGAIVCSSPAGPKQGMP
SIO_010081: PNAP_RS23025
subclass of: SO_0000673
so part of: PNAP_RS23025
location: 20886..21182
location: region:20886-21182:1
so has part: feature:20886-21182:1:exon

WP_011798276.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20886-21182:1:exon

PNAP_RS26370
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS26370
old locus tag: Pnap_4841
so part of: sequence
location: 21179..21535
location: region:21179-21535:1
so has part: feature:21179-21535:1:exon
subclass of: SO_0000010

position:21179:1
position: 21179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21535:1
position: 21535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21179-21535:1:exon

PNAP_RS26370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS26370
old locus tag: Pnap_4841
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTLPFERTRAMLDVRLFLRELTDPRLTPRIPRALRGKAASLLKHFPTNADMDRAHQALPDCFGPVPPFRIRAELAAEAAPKNKLLAGIRDTAQAGKGGRLPGEQTDGAPARTGSKNGD
SIO_010081: PNAP_RS26370
subclass of: SO_0000673
so part of: PNAP_RS26370
location: 21179..21535
location: region:21179-21535:1
so has part: feature:21179-21535:1:exon

WP_011798277.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21179-21535:1:exon

PNAP_RS27370
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS27370
so part of: sequence
location: 21525..21755
location: region:21525-21755:1
so has part: feature:21525-21755:1:exon
subclass of: SO_0000010

position:21525:1
position: 21525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21755:1
position: 21755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21525-21755:1:exon

PNAP_RS27370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS27370
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MATELFSIWGFQTGWLSQHGDGYAVSAELDGLDIWYWSTNYEEVQKAFSRACRRMFLRRFFPWLAPSHYTQIPVSL
SIO_010081: PNAP_RS27370
subclass of: SO_0000673
so part of: PNAP_RS27370
location: 21525..21755
location: region:21525-21755:1
so has part: feature:21525-21755:1:exon

WP_157040519.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21525-21755:1:exon

PNAP_RS23035
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23035
old locus tag: Pnap_4842
so part of: sequence
location: complement(21728..23065)
location: region:21728-23065:-1
so has part: feature:21728-23065:-1:exon
subclass of: SO_0000010

position:21728:-1
position: 21728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23065:-1
position: 23065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21728-23065:-1:exon

PNAP_RS23035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23035
old locus tag: Pnap_4842
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798261.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS4 family transposase
translation: MGWGDEEFKTIELGDERLNRRAVLLAERLGQKPSASIPGACQSWAETAAAYRFLCNEEVSWDKVLAPHLQASQARMAQHQVVLCLQDTTELDYHGQDIEGLGPLNYEAQRGLYLHPTYVVSPEREPLGVFNAWTWAREFKAADGKRGGPCESTRWIESYERIAESAQQLPQTRHVCIGDRESDMLELMVKARDLGYPADYLVRSQHNRVLPGGDKLWDRVMVQTSLGRIRFMLPAGRGRKSRTVEQDIRIERVQLSDRDKGVIEVSCLVASEVNAPAGVKPVVWRLLSNRVASTLEQASELIDWYRSRWEIELFFLILKEGCRVERLQLSDKDRLESALAIYLVIAWRINRLMRLGRTVPELDAELVFEPDEWRAAYILNKKPIPKKMPGLNEVIRLIARRGGFLGRKGDGEPGARTLWLGLQEIAVFVEGARYARSYSETGICV
SIO_010081: PNAP_RS23035
subclass of: SO_0000673
so part of: PNAP_RS23035
location: complement(21728..23065)
location: region:21728-23065:-1
so has part: feature:21728-23065:-1:exon

WP_011798278.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21728-23065:-1:exon

PNAP_RS27375
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS27375
so part of: sequence
location: 23193..23405
location: region:23193-23405:1
so has part: feature:23193-23405:1:exon
subclass of: SO_0000010

position:23193:1
position: 23193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23405:1
position: 23405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23193-23405:1:exon

PNAP_RS27375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS27375
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTLPAERTRAIIYTKQFLERLLVPRLTPDVPESVRQEARGLLRHYPGTDDLEIAHRALPDWFGPARKAED
SIO_010081: PNAP_RS27375
subclass of: SO_0000673
so part of: PNAP_RS27375
location: 23193..23405
location: region:23193-23405:1
so has part: feature:23193-23405:1:exon

WP_157040520.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23193-23405:1:exon

PNAP_RS23040
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23040
old locus tag: Pnap_4843
so part of: sequence
location: 23559..23921
location: region:23559-23921:1
so has part: feature:23559-23921:1:exon
subclass of: SO_0000010

position:23559:1
position: 23559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23921:1
position: 23921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23559-23921:1:exon

PNAP_RS23040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23040
old locus tag: Pnap_4843
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTIKGMQAWRELGDIHLQDARQPELSRRSRTDAAFDVCYMYARCIVGEKSELYDHPDASIFVLAATQLGWMDSVLRPARQHVHERDEPLRVASQYDVLLTLALRLMGALGADRIPAEGPL
SIO_010081: PNAP_RS23040
subclass of: SO_0000673
so part of: PNAP_RS23040
location: 23559..23921
location: region:23559-23921:1
so has part: feature:23559-23921:1:exon

WP_157040521.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23559-23921:1:exon

PNAP_RS23045
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23045
old locus tag: Pnap_4844
so part of: sequence
location: 23918..24709
location: region:23918-24709:1
so has part: feature:23918-24709:1:exon
subclass of: SO_0000010

position:23918:1
position: 23918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24709:1
position: 24709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23918-24709:1:exon

PNAP_RS23045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23045
old locus tag: Pnap_4844
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018417869.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metallophosphoesterase
translation: MKLQIASDLHLEFLQRLFPGERLISPAHGADLLVLAGDIANGVEAIELFKDWPVPVLYLAGNHEFYGHAIEQVRADLRKAAAGTSVLFMDNDVVDFGGVRFLGTTLWTDYRLELNRTQRQLMENAELRISDHYCIRCSDGKFTAERALAEHELARSWLTHELDKPYNGKTVVISHHGPHPLSVHPRYVGEALNAAFVSNLAELLPKADLWIHGHVPDNFDYRVAGCRVVANPCGYALNRNAVDTSKELVFENKAFEWACVVDV
SIO_010081: PNAP_RS23045
subclass of: SO_0000673
so part of: PNAP_RS23045
location: 23918..24709
location: region:23918-24709:1
so has part: feature:23918-24709:1:exon

WP_011798280.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23918-24709:1:exon

PNAP_RS23050
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23050
old locus tag: Pnap_4845
so part of: sequence
location: 24757..25020
location: region:24757-25020:1
so has part: feature:24757-25020:1:exon
subclass of: SO_0000010

position:24757:1
position: 24757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25020:1
position: 25020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24757-25020:1:exon

PNAP_RS23050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23050
old locus tag: Pnap_4845
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTIAELMEILKTYDPNAVVVLADAAGEQGKPGVARLRADEIQPMELYQVEHKGVSWYEFGDGDEPPAAGERTTVFDTKVKAVFLGGL
SIO_010081: PNAP_RS23050
subclass of: SO_0000673
so part of: PNAP_RS23050
location: 24757..25020
location: region:24757-25020:1
so has part: feature:24757-25020:1:exon

WP_011798281.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24757-25020:1:exon

PNAP_RS23055
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23055
old locus tag: Pnap_4846
so part of: sequence
location: complement(25037..25342)
location: region:25037-25342:-1
so has part: feature:25037-25342:-1:exon
subclass of: SO_0000010

position:25037:-1
position: 25037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25342:-1
position: 25342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25037-25342:-1:exon

PNAP_RS23055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23055
old locus tag: Pnap_4846
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798282.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acylphosphatase
translation: MQSDKDKTFDSWLVKAIGRVQGVGYRDACIRYARAQDITGWVRNRVDGSVELMLQGSKEQLADMCRWLRDGIPAAHVEKLEVSKVPPPSPRLNRFDRLPNL
SIO_010081: PNAP_RS23055
subclass of: SO_0000673
so part of: PNAP_RS23055
location: complement(25037..25342)
location: region:25037-25342:-1
so has part: feature:25037-25342:-1:exon

WP_011798282.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25037-25342:-1:exon

PNAP_RS27380
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS27380
so part of: sequence
location: complement(25364..26065)
location: region:25364-26065:-1
so has part: feature:25364-26065:-1:exon
subclass of: SO_0000010

position:25364:-1
position: 25364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26065:-1
position: 26065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25364-26065:-1:exon

PNAP_RS27380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS27380
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKAHRACLRSDVFLKFADLFAFNRFLQRPLNVEVKVDLPKVRRCMMGNHNEDFAEGYRTKGWSNQPGAQSFNEGGRAALRDQQLEFSRSQAAVREQQRLAEQRAINSSSSLPYSAFTTSGSSQSPTWTTGSSGSGAGFGSMEEAAKVGAGGFFILFCLYAFIQPASWSWLQLGMGTAGAVIAGGIAGVALYIALKVLAFMLKVALGLLGIGIILHFLGVLDIFAVLASLLRML
SIO_010081: PNAP_RS27380
subclass of: SO_0000673
so part of: PNAP_RS27380
location: complement(25364..26065)
location: region:25364-26065:-1
so has part: feature:25364-26065:-1:exon

WP_157040522.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25364-26065:-1:exon

PNAP_RS23065
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23065
old locus tag: Pnap_4848
so part of: sequence
location: 26218..27315
location: region:26218-27315:1
so has part: feature:26218-27315:1:exon
subclass of: SO_0000010

position:26218:1
position: 26218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27315:1
position: 27315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26218-27315:1:exon

PNAP_RS23065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23065
old locus tag: Pnap_4848
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015635235.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA alkylation repair enzyme-like protein
translation: MSTTENPALKEIFDGRQFRHIAEELAAVCPAFDAERFHEFALKGLDELSLMQRLRRTAQSLHAALPLDYREAVAVLRLLAPRMQSKFATLALPDFVALYGLDDFDFSMEALRFFTAFGSSEFAVRCFLRKDLHRALVTMQVWSLDGDEHVRRLASEGSRPRLPWSFRLDALMRDPSLTAPILSLLMADPSLYVRKSVANHLNDITKDQPDWLLGQVQSWPLDNPRTAWIARHALRTLIKKGDPRALAVVGAAAEPKVLVTDFVVAPHHLMLGERLNLSFTLTSEVQVPQRLVVDYIVHYVKKSGVAFPKVFKLKEFTLQPGASVCIARIQTVRDFTTRVHYPGVHGVELVVNGRILASASFQLLT
SIO_010081: PNAP_RS23065
subclass of: SO_0000673
so part of: PNAP_RS23065
location: 26218..27315
location: region:26218-27315:1
so has part: feature:26218-27315:1:exon

WP_011798284.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26218-27315:1:exon

PNAP_RS23070
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23070
old locus tag: Pnap_4849
so part of: sequence
location: 27545..28195
location: region:27545-28195:1
so has part: feature:27545-28195:1:exon
subclass of: SO_0000010

position:27545:1
position: 27545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28195:1
position: 28195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27545-28195:1:exon

PNAP_RS23070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23070
old locus tag: Pnap_4849
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018313615.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MSAASNVDSVLDQQLLLQLGARLRHARVKRGLTTIQLAQQARISRMTLSAVEAGAPSPTMGSYLRVMGVLGVSQDLALVASDTLQGTAAQRTDRKVSSNTVVVPVSTGDARHELQDLQSLMLHEEAVRLLKKKPELIQQALDTLERWRSAGDPHSRFLWDEWSVILHRRAWRRALSLTRRSKELRQASPLATILPVEVRQRVLEQVGQAGQRAATR
SIO_010081: PNAP_RS23070
subclass of: SO_0000673
so part of: PNAP_RS23070
location: 27545..28195
location: region:27545-28195:1
so has part: feature:27545-28195:1:exon

WP_011798285.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27545-28195:1:exon

PNAP_RS23075
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23075
old locus tag: Pnap_4850
so part of: sequence
location: complement(28519..28791)
location: region:28519-28791:-1
so has part: feature:28519-28791:-1:exon
subclass of: SO_0000010

position:28519:-1
position: 28519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28791:-1
position: 28791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28519-28791:-1:exon

PNAP_RS23075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23075
old locus tag: Pnap_4850
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019654949.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2164 domain-containing protein
translation: MTIEISKQARSEAVASIERYFLVNMEEKIGNIAAGALLGFFLEELGPLVYNKAVADVQERLQSRISELDIEVHEDEFQYWRKYDSKRKPR
SIO_010081: PNAP_RS23075
subclass of: SO_0000673
so part of: PNAP_RS23075
location: complement(28519..28791)
location: region:28519-28791:-1
so has part: feature:28519-28791:-1:exon

WP_011798286.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28519-28791:-1:exon

PNAP_RS23080
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23080
old locus tag: Pnap_4851
so part of: sequence
location: complement(28880..29233)
location: region:28880-29233:-1
so has part: feature:28880-29233:-1:exon
subclass of: SO_0000010

position:28880:-1
position: 28880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29233:-1
position: 29233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28880-29233:-1:exon

PNAP_RS23080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23080
old locus tag: Pnap_4851
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007528244.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotide pyrophosphohydrolase
translation: MANAPLIDVSCLEAALQKFADERDWQQYHSPKNLAMALSAEVGELVEIFQWQTEEQSKLVAKDEATAQAVRDELADVLLYLVRLSSVLGVDLNEAVAQKLVKNVSKYPAGDSTPSRP
SIO_010081: PNAP_RS23080
subclass of: SO_0000673
so part of: PNAP_RS23080
location: complement(28880..29233)
location: region:28880-29233:-1
so has part: feature:28880-29233:-1:exon

WP_011798287.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28880-29233:-1:exon

PNAP_RS25285
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS25285
old locus tag: Pnap_4852
so part of: sequence
location: 29356..30111
location: region:29356-30111:1
so has part: feature:29356-30111:1:exon
subclass of: SO_0000010

position:29356:1
position: 29356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30111:1
position: 30111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29356-30111:1:exon

PNAP_RS25285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS25285
old locus tag: Pnap_4852
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008046117.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2306 domain-containing protein
translation: MDGPWFRLKSICRSSLHELRRTHAKRGFFGFNDAMPLVGFTALVILSLGVAGYAVGVYGFLPLGVALHPDMRAAFEAHRIGVYAHVFTSAVALALGPVQFSARFRAARPGLHRWLGRLYLGVGVLVGGVAGLFMAFHAFGGLAARLGFGCLAALWLYTGFRAYRAIRARDIAAHRRWMVRNFALTFAAVTLRLWMPASMVLGIPFENAYPVIAWLCWIPNLVLAELAFNQARNRATRPTMATEPGSAAQER
SIO_010081: PNAP_RS25285
subclass of: SO_0000673
so part of: PNAP_RS25285
location: 29356..30111
location: region:29356-30111:1
so has part: feature:29356-30111:1:exon

WP_011798288.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29356-30111:1:exon

PNAP_RS23090
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23090
old locus tag: Pnap_4853
so part of: sequence
location: 30119..30565
location: region:30119-30565:1
so has part: feature:30119-30565:1:exon
subclass of: SO_0000010

position:30119:1
position: 30119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30565:1
position: 30565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30119-30565:1:exon

PNAP_RS23090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23090
old locus tag: Pnap_4853
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019898216.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNIRRFLFCLLAYAWAAPNTLLGLAAGLVMLCLGGRLRFVAGVAEFHGGWLGRIVARLPEQVGFGAMTLGHAIVGIDQPTLCVLRAHEHAHVRQYEQWGLFFLPAYALSSLWQVVNGRSAHASNFFERQACAAVQARQKGAAASGRFQ
SIO_010081: PNAP_RS23090
subclass of: SO_0000673
so part of: PNAP_RS23090
location: 30119..30565
location: region:30119-30565:1
so has part: feature:30119-30565:1:exon

WP_011798289.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30119-30565:1:exon

PNAP_RS23095
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23095
old locus tag: Pnap_4854
so part of: sequence
location: complement(31290..32384)
location: region:31290-32384:-1
so has part: feature:31290-32384:-1:exon
subclass of: SO_0000010

position:31290:-1
position: 31290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32384:-1
position: 32384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31290-32384:-1:exon

PNAP_RS23095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23095
old locus tag: Pnap_4854
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009517095.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M14 family metallopeptidase
translation: MPDEADAFSLNYAQARAKFLEAAETAGLHVTSYPLALPGRDGEALAVDAAWQGPRQATKLLLLSSGVHGVEGYAGSGAQTALLQDSAWMEQVTASGIPVMYVHALNPYGFSHIRRVTQENVDLNRNFQDFTAPLPSNPAYCRLHPLLLPDKWPPTWGNRAAILGLIATKGLRTLQVAISGGQYELPGSMFFGGAAPTWSHRTLRQVLREHTAQVRQLAWIDLHTGLGKRGQCERIFMGSNNDTAGYARANALWGRTAPLVQAGSATSVSAPLTGLVWNAALEECPQAELTGVCLEFGTKPLLEVANALRGDHWLHLHPQTPAALQASIKQRLFDAFFVNTPDWKRNVVAQVRLAAAQALDGLCR
SIO_010081: PNAP_RS23095
subclass of: SO_0000673
so part of: PNAP_RS23095
location: complement(31290..32384)
location: region:31290-32384:-1
so has part: feature:31290-32384:-1:exon

WP_041377739.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31290-32384:-1:exon

PNAP_RS23100
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
gene: yjjJ
locus tag: PNAP_RS23100
old locus tag: Pnap_4855
so part of: sequence
location: 32558..33916
location: region:32558-33916:1
so has part: feature:32558-33916:1:exon
subclass of: SO_0000010

position:32558:1
position: 32558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33916:1
position: 33916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32558-33916:1:exon

PNAP_RS23100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
gene: yjjJ
locus tag: PNAP_RS23100
old locus tag: Pnap_4855
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011482512.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system HipA family toxin YjjJ
translation: MTISEDLLRTLRTWHKLPAGQLLERLDISRATLMRAVRELGSQVVSRGKARRTAYAARRPVRGSLQALALYRIDRDGHAQDAAMLYPLHPAGCALDGAEPLEWPLDEDMRDGWFEGLPYFLDDMRPQGFLGRHFARRHADLLQVSTDPKDWSEDDALHALALLGSDAPGNYILGEPALRQWLLHSQQELLPLQDRQVVPAYLLKAEEAMAHGTAGSSAGGEFPKFTAFREVAGRPVHVIVKFSGSDGAPGTVRWSDLLVCEHLALLAVAEHLDLEAAVSRIHQAGGRTFLEVERFDRHGRLGRSPVCSWAALNAALVGLAGKPWPQGGAALLGLGLIDVQCMAALQRLWLFGQLIANSDMHDGNLAFRPGLQLAPVYDMLPMRYAPVRGVELPLKDFVPPLPVPAEKEAWLTAAHAAGHFWAAASEDARISPDFRAVCAQNAAKVRRALDMA
SIO_010081: PNAP_RS23100
subclass of: SO_0000673
so part of: PNAP_RS23100
location: 32558..33916
location: region:32558-33916:1
so has part: feature:32558-33916:1:exon

WP_011798291.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32558-33916:1:exon

PNAP_RS23105
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23105
old locus tag: Pnap_4856
so part of: sequence
location: complement(34250..34537)
location: region:34250-34537:-1
so has part: feature:34250-34537:-1:exon
subclass of: SO_0000010

position:34250:-1
position: 34250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34537:-1
position: 34537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34250-34537:-1:exon

PNAP_RS23105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23105
old locus tag: Pnap_4856
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002708622.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSISDTLKSRLVKDRLMTSITLRIPVDVVESMKNIAPKRGFAGYQSLLKAYLSEGLRRDEAQFAFGAQARLLEALRKHGVAQSVLDEATREMESM
SIO_010081: PNAP_RS23105
subclass of: SO_0000673
so part of: PNAP_RS23105
location: complement(34250..34537)
location: region:34250-34537:-1
so has part: feature:34250-34537:-1:exon

WP_041377740.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34250-34537:-1:exon

PNAP_RS26380
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS26380
old locus tag: Pnap_4857
pseudo: true
so part of: sequence
location: complement(34524..34822)
location: region:34524-34822:-1
so has part: feature:34524-34822:-1:exon
subclass of: SO_0000010

position:34524:-1
position: 34524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34822:-1
position: 34822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34524-34822:-1:exon

PNAP_RS26380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS26380
old locus tag: Pnap_4857
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005220755.1
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: BrnT family toxin
SIO_010081: PNAP_RS26380
subclass of: SO_0000673
so part of: PNAP_RS26380
location: complement(34524..34822)
location: region:34524-34822:-1
so has part: feature:34524-34822:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:34524-34822:-1:exon

PNAP_RS23110
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23110
old locus tag: Pnap_4858
so part of: sequence
location: 35461..36123
location: region:35461-36123:1
so has part: feature:35461-36123:1:exon
subclass of: SO_0000010

position:35461:1
position: 35461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36123:1
position: 36123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35461-36123:1:exon

PNAP_RS23110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23110
old locus tag: Pnap_4858
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013104996.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF433 domain-containing protein
translation: MPTPLFIPTAQAAFIAGLTDRQMNRVVDEHLVPEPLFEQQGNSRLFTRLGAAFAKFYFSTEDLLLAGARRQVLDELSARVDRLQVKDQVLMLTLLDSMSWKVERKHVEVDVLPFLQEAFYRAKEVDQADALVTTNPEVMGGVPVFVGTRVPFGIVLGSLAAGVHLGRLQASYPFLTEAHIQAAKVYEAVHPRRGRPRRIADVNPELERRVIRVIKRAASA
SIO_010081: PNAP_RS23110
subclass of: SO_0000673
so part of: PNAP_RS23110
location: 35461..36123
location: region:35461-36123:1
so has part: feature:35461-36123:1:exon

WP_011798293.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35461-36123:1:exon

PNAP_RS23115
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23115
old locus tag: Pnap_4859
so part of: sequence
location: 36413..37345
location: region:36413-37345:1
so has part: feature:36413-37345:1:exon
subclass of: SO_0000010

position:36413:1
position: 36413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37345:1
position: 37345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36413-37345:1:exon

PNAP_RS23115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23115
old locus tag: Pnap_4859
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019398473.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]; GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO process: GO:0006812 - monoatomic cation transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cation diffusion facilitator family transporter
translation: MSKNSGSLKAVFYALGANGGIALAKAVAAFFTGSGAMLAEALHSFADCGNQVLLLVGMQQAKKLPTPDHPMGYGRVVYFWSMMVGVLLFSIGGLFSVWHGVQSLQHPEPVKYLLPSLGVLLVAVVLEGISLRGALKALAVERGEKSLWRWFRETRQSELLVITGEDIAALAGLALAFVALALTGLTGNPVFDALGSIAVGLLLMGVSFAVTTEVKSLITGESASPEMRSAITEFVASQPEVERIVNLITFQLGDKIAVAVKAKMVPMASADALVSAIDEVEERLQAHFPNLHWSFFEPDAGKPRPEPAAL
SIO_010081: PNAP_RS23115
subclass of: SO_0000673
so part of: PNAP_RS23115
location: 36413..37345
location: region:36413-37345:1
so has part: feature:36413-37345:1:exon

WP_011798294.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36413-37345:1:exon

PNAP_RS23120
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23120
old locus tag: Pnap_4860
so part of: sequence
location: complement(37426..38079)
location: region:37426-38079:-1
so has part: feature:37426-38079:-1:exon
subclass of: SO_0000010

position:37426:-1
position: 37426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38079:-1
position: 38079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37426-38079:-1:exon

PNAP_RS23120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23120
old locus tag: Pnap_4860
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003262851.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2076 family protein
translation: MNLQEREQLTTFLQQLAQARAGVKDEEAQAMIASTFARQPDAAYLVVQRALLLDAALQDAQAQITQLKAQLAQQRPAPAASSFLDATTWGRQPSPAFSAPVMSSPPVQAVQAVQPAAFAPPVRGFQAPGFLSNMATTAAGVAAGAFLFQGINSLVGGHHNSPLAGASPLSSPAADKEAPANNFLDAPTDTSSSIPDSSAGFSELLDIGGSDDSSDWT
SIO_010081: PNAP_RS23120
subclass of: SO_0000673
so part of: PNAP_RS23120
location: complement(37426..38079)
location: region:37426-38079:-1
so has part: feature:37426-38079:-1:exon

WP_041377741.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37426-38079:-1:exon

PNAP_RS23125
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23125
old locus tag: Pnap_4861
so part of: sequence
location: 38254..38619
location: region:38254-38619:1
so has part: feature:38254-38619:1:exon
subclass of: SO_0000010

position:38254:1
position: 38254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38619:1
position: 38619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38254-38619:1:exon

PNAP_RS23125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23125
old locus tag: Pnap_4861
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPTPLPKNRLFPLTAEDKTRLQNLAPLFDIHFRKMDEQTCVLRTMAGAGALELKLPASLAYRRLLSELCEKTVPWIPFHLKESCRDSLLGRSDANLARVAVLYARDRKATRARAAISLCLL
SIO_010081: PNAP_RS23125
subclass of: SO_0000673
so part of: PNAP_RS23125
location: 38254..38619
location: region:38254-38619:1
so has part: feature:38254-38619:1:exon

WP_041377714.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38254-38619:1:exon

PNAP_RS23130
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23130
old locus tag: Pnap_4862
so part of: sequence
location: 38688..39215
location: region:38688-39215:1
so has part: feature:38688-39215:1:exon
subclass of: SO_0000010

position:38688:1
position: 38688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39215:1
position: 39215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38688-39215:1:exon

PNAP_RS23130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23130
old locus tag: Pnap_4862
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011801009.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQVLLLDNCCTATFLKGHHMPANTQIDDIAYTMKENLAKFNPAASQEALAPVMDNLKAWGELIQAQAQTAQAAIAETVELFKGIKEPTAAFEAMKAAAEQGLALASQNMKDAMALSFEQFQSGVDTLQKAYPAPEAFAPVAKGLKDAASTMQNVLESAMNKSAETVKTAARKARA
SIO_010081: PNAP_RS23130
subclass of: SO_0000673
so part of: PNAP_RS23130
location: 38688..39215
location: region:38688-39215:1
so has part: feature:38688-39215:1:exon

WP_232290864.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38688-39215:1:exon

PNAP_RS26385
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS26385
old locus tag: Pnap_4863
so part of: sequence
location: complement(39451..39924)
location: region:39451-39924:-1
so has part: feature:39451-39924:-1:exon
subclass of: SO_0000010

position:39451:-1
position: 39451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39924:-1
position: 39924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39451-39924:-1:exon

PNAP_RS26385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS26385
old locus tag: Pnap_4863
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSFEYITVGMNGTIVKNLKFLDLREQKYGANKPKTMSQIDHKNVAFSQSDMEILVIAGKKNLSIAERGNSSIFSEDRAKKAADAADTAAKATRVIAAVAGAGASVLAPTGLSAVGVALGLVSTPLIVTAVPILVAIAGGAAVVSAAASLHSKMKRKK
SIO_010081: PNAP_RS26385
subclass of: SO_0000673
so part of: PNAP_RS26385
location: complement(39451..39924)
location: region:39451-39924:-1
so has part: feature:39451-39924:-1:exon

WP_011798298.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39451-39924:-1:exon

PNAP_RS23135
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23135
old locus tag: Pnap_4864
so part of: sequence
location: complement(40277..40495)
location: region:40277-40495:-1
so has part: feature:40277-40495:-1:exon
subclass of: SO_0000010

position:40277:-1
position: 40277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40495:-1
position: 40495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40277-40495:-1:exon

PNAP_RS23135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23135
old locus tag: Pnap_4864
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011458667.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPSDEEIRALISNSSLSDWFKHALLSALDRDPKDAAADAGLLSIVLDQRANSLEAYALALKAILEAKRSGPL
SIO_010081: PNAP_RS23135
subclass of: SO_0000673
so part of: PNAP_RS23135
location: complement(40277..40495)
location: region:40277-40495:-1
so has part: feature:40277-40495:-1:exon

WP_041377715.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40277-40495:-1:exon

PNAP_RS27385
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS27385
so part of: sequence
location: 40935..41252
location: region:40935-41252:1
so has part: feature:40935-41252:1:exon
subclass of: SO_0000010

position:40935:1
position: 40935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41252:1
position: 41252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40935-41252:1:exon

PNAP_RS27385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS27385
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRTDDGPARIFSTDFVNDASTMHSHASFKGEVADDGNFEACACMLTRVDFKWLMAGQGWWIDPHRLEHDCLYAEEVLSFALASPSLVLRACAASLQMQLGYPVSH
SIO_010081: PNAP_RS27385
subclass of: SO_0000673
so part of: PNAP_RS27385
location: 40935..41252
location: region:40935-41252:1
so has part: feature:40935-41252:1:exon

WP_157040523.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40935-41252:1:exon

PNAP_RS23140
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23140
old locus tag: Pnap_4865
so part of: sequence
location: 41313..41759
location: region:41313-41759:1
so has part: feature:41313-41759:1:exon
subclass of: SO_0000010

position:41313:1
position: 41313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41759:1
position: 41759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41313-41759:1:exon

PNAP_RS23140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23140
old locus tag: Pnap_4865
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011483551.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1810 domain-containing protein
translation: MDTNSTSHGLERFVEAQDRVYAAVKEELAAGNKTSHWMWFVFPQLKALGRSSMAKHFGIESGGEALAYWQHPVLGKRLKECTELVLAADGKTVHEIFGSPDDLKFRSCMTLFAQVAPEEPVFSQALEHFFDGKPDTMTLSLLQPVAEH
SIO_010081: PNAP_RS23140
subclass of: SO_0000673
so part of: PNAP_RS23140
location: 41313..41759
location: region:41313-41759:1
so has part: feature:41313-41759:1:exon

WP_011798300.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41313-41759:1:exon

PNAP_RS23145
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23145
old locus tag: Pnap_4866
so part of: sequence
location: 42101..42526
location: region:42101-42526:1
so has part: feature:42101-42526:1:exon
subclass of: SO_0000010

position:42101:1
position: 42101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42526:1
position: 42526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42101-42526:1:exon

PNAP_RS23145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23145
old locus tag: Pnap_4866
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012507766.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNKTIRAGLTYFAIVLGTGFVLGVFRVPFLVPRIGERWAELAEMPIMATVIFLAAGFILRRFPAICSPARCLAAGVLALALSVCAELGLAVVLQSQTLAEFLHSRDKVSGSVYIALLLVFAAMPRLRLRSHEQAVTRNSKS
SIO_010081: PNAP_RS23145
subclass of: SO_0000673
so part of: PNAP_RS23145
location: 42101..42526
location: region:42101-42526:1
so has part: feature:42101-42526:1:exon

WP_011798301.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42101-42526:1:exon

PNAP_RS23150
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23150
old locus tag: Pnap_4867
so part of: sequence
location: 42622..43443
location: region:42622-43443:1
so has part: feature:42622-43443:1:exon
subclass of: SO_0000010

position:42622:1
position: 42622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43443:1
position: 43443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42622-43443:1:exon

PNAP_RS23150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23150
old locus tag: Pnap_4867
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011300583.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AraC family transcriptional regulator
translation: MDAPTLNRYRGDFVAWTGGCGFIGEGGGGGAPISPHAHYAIQLAIGAPTGLRVQFGRRGEWQSCPAALVPSRATHSIDVNDCEWSAVLFIEPETPEGKALSARLQGRLELLDADFVAATTRRLATAWRIERNYDAVIAACLELVHNISGTTLRTPSDPRVLAAVHYIGQRAGHTVSLSEVAQAANLSAGRFRHLFVEETGMPLRTYLLWRRLLQVWTLLMQGQTLSSAAHAAGFADSAHLSRTARSMFGLAPSALQMNGPLSARLRMPQHHLG
SIO_010081: PNAP_RS23150
subclass of: SO_0000673
so part of: PNAP_RS23150
location: 42622..43443
location: region:42622-43443:1
so has part: feature:42622-43443:1:exon

WP_011798302.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42622-43443:1:exon

PNAP_RS23155
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23155
old locus tag: Pnap_4868
so part of: sequence
location: complement(43431..44705)
location: region:43431-44705:-1
so has part: feature:43431-44705:-1:exon
subclass of: SO_0000010

position:43431:-1
position: 43431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44705:-1
position: 44705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43431-44705:-1:exon

PNAP_RS23155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23155
old locus tag: Pnap_4868
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011300582.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c peroxidase
translation: MNQRVIALAVAAAALAVTALAAQDLKKAPLRDRWSVQEVTALASMRLKEAGQRPADASNAYEQRAEAAALGRALFNDTRLSKNGQVACASCHAADKQFEDGRQFGQGIATGKRRTMPVMGAAHAPFLFWDGRKDSAWSQALGPLEDAAEHGGNRVRLVRLVLAQYKDPYGKVFGAVPEVGELPGDASPNGTQAERAAWAALAPATRNSVNRVFANMGKAIAAYERLVSYGESRFDRYAQATVAGDGPGQDALTGQEVRGLRLFLTKGQCVTCHNGPLLTDHAFHNTGVPPLEPANPDRGRAEGLKKLLADEFNCLGRYSDAKPEQCGELQFLSANDTAQLGAFRTPSLRNVAVRPPYMHAGQFSTLDAVVQHYAASPQAAIGHSELAQPGENHAQRQSIRLSADDIKDLAAFLGTLTGPVHQPR
SIO_010081: PNAP_RS23155
subclass of: SO_0000673
so part of: PNAP_RS23155
location: complement(43431..44705)
location: region:43431-44705:-1
so has part: feature:43431-44705:-1:exon

WP_011798303.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43431-44705:-1:exon

PNAP_RS28045
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS28045
old locus tag: Pnap_4869
so part of: sequence
location: complement(44702..45538)
location: region:44702-45538:-1
so has part: feature:44702-45538:-1:exon
subclass of: SO_0000010

position:44702:-1
position: 44702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45538:-1
position: 45538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44702-45538:-1:exon

PNAP_RS28045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS28045
old locus tag: Pnap_4869
inference: COORDINATES: protein motif:HMM:NF023903.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3703 domain-containing protein
translation: MTTFAIRIKPSVQREIAAADAAQARGHFSTSFEHLERAHVLGQAATAEHVRVHWHMLRFALRNSLHGEAFGQLWRLVAASIFTAPGLVPEGNTGGADVSGFRRMPIAQDLQQALNAARAPHTPAPKKIMLRMLTAAAALAALATLMTGCVTQPKDLDLSLEKNSVSNVYRVALVPPAQAPAINQMHSWKVKLAAPDGTPVHGAKFAVDGGMPQHGHGLPTQPRVTREVENGTYALDGMKFSMTGWWEVKLAIQGPQGADQVTFNWVVNNPAVQTVSLQ
SIO_010081: PNAP_RS28045
subclass of: SO_0000673
so part of: PNAP_RS28045
location: complement(44702..45538)
location: region:44702-45538:-1
so has part: feature:44702-45538:-1:exon

WP_011798304.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44702-45538:-1:exon

PNAP_RS25290
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS25290
old locus tag: Pnap_4870
so part of: sequence
location: 46264..46680
location: region:46264-46680:1
so has part: feature:46264-46680:1:exon
subclass of: SO_0000010

position:46264:1
position: 46264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46680:1
position: 46680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46264-46680:1:exon

PNAP_RS25290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS25290
old locus tag: Pnap_4870
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIEALIGAAVGALTIFFARFIRGERWLYSLGLLTLPGIYASFALQAGEHAVGLKEIIYGVPFVVAGLVFAFVSVRQSAVVVGVFWLLHGLYDLVHSQLITNTGVPSWYPVWCFAVDAVIGSYLLWLSRRVPDANLRQA
SIO_010081: PNAP_RS25290
subclass of: SO_0000673
so part of: PNAP_RS25290
location: 46264..46680
location: region:46264-46680:1
so has part: feature:46264-46680:1:exon

WP_011798305.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46264-46680:1:exon

PNAP_RS23175
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23175
old locus tag: Pnap_4871
so part of: sequence
location: complement(46954..47976)
location: region:46954-47976:-1
so has part: feature:46954-47976:-1:exon
subclass of: SO_0000010

position:46954:-1
position: 46954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47976:-1
position: 47976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46954-47976:-1:exon

PNAP_RS23175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23175
old locus tag: Pnap_4871
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011463511.1
GO function: GO:0004519 - endonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HNH endonuclease domain-containing protein
translation: MFLGKLQRIFTESDFTATYKFALLMALADLAVELGADDGDEFMVSIRQIAERFIQMYWRHALPFGTGRPNTFSGVLTQNNGVQAAVVSAIATFRTRHGAASPQRARILPEYQALLRSVAQTVSAQPVNYLQNFGGMTDAFLYERAGAGQLKLKPGVAYCLRRFQPLVQQLSRSHWVEHIKRNRRNTGILGQADDLEDFLFSASRQSLLSMGQGLRKLDGSKCFYCTQALTEADVDHFVPFSQYPRDLAHNFVLAHPTCNRSKSDTLAAGPHLERWLERIGRHADAIKEVGMAAGMLADAQVSLKIAAWGYTTAIARGGSAWLAPSRYEAIDQRYNAYFIP
SIO_010081: PNAP_RS23175
subclass of: SO_0000673
so part of: PNAP_RS23175
location: complement(46954..47976)
location: region:46954-47976:-1
so has part: feature:46954-47976:-1:exon

WP_232290865.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46954-47976:-1:exon

PNAP_RS23180
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23180
old locus tag: Pnap_4872
so part of: sequence
location: complement(48020..48421)
location: region:48020-48421:-1
so has part: feature:48020-48421:-1:exon
subclass of: SO_0000010

position:48020:-1
position: 48020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48421:-1
position: 48421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48020-48421:-1:exon

PNAP_RS23180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23180
old locus tag: Pnap_4872
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011463512.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HIT family protein
translation: MTLISAPSPCPFCTLPASRIVEENAHAVLILDGYPVSPGHSLVIPKRHVRSFFEVTAPEREALFALLDRAKELVAEQHRPDGYNIGINDGAAAGQTVPHLHIHLIPRYDGDQLDPRGGVRWVIPEKADYWTGR
SIO_010081: PNAP_RS23180
subclass of: SO_0000673
so part of: PNAP_RS23180
location: complement(48020..48421)
location: region:48020-48421:-1
so has part: feature:48020-48421:-1:exon

WP_011798307.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48020-48421:-1:exon

PNAP_RS23185
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23185
old locus tag: Pnap_4873
so part of: sequence
location: complement(48530..49366)
location: region:48530-49366:-1
so has part: feature:48530-49366:-1:exon
subclass of: SO_0000010

position:48530:-1
position: 48530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49366:-1
position: 49366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48530-49366:-1:exon

PNAP_RS23185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23185
old locus tag: Pnap_4873
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007865194.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKIVRNVMVAFLVAALVACAWLKPLDAPAAQQADAGMKRALITFAAARALNAVISVAQGTEASFQPLGVGVTLSLGQVLRPIHDLVEQFSTLMLAASVIFGVQKILISIGGNSLVSLALSITALGWAGYYWRQPRPPALLSRLLVMLLMLRFAIPVVTLGTDALWQKYLAADYAVSQDSISATSGQVGKLNPSISEVSDSQGLLEKMKGWVSKNADVKVHFANLKAAAEQATEDIIKLIVIFVLQTLVIPLLLLWALYGVARRAFEWPGPIPAGSAKT
SIO_010081: PNAP_RS23185
subclass of: SO_0000673
so part of: PNAP_RS23185
location: complement(48530..49366)
location: region:48530-49366:-1
so has part: feature:48530-49366:-1:exon

WP_041377716.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48530-49366:-1:exon

PNAP_RS23190
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23190
old locus tag: Pnap_4874
so part of: sequence
location: complement(49378..50232)
location: region:49378-50232:-1
so has part: feature:49378-50232:-1:exon
subclass of: SO_0000010

position:49378:-1
position: 49378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50232:-1
position: 50232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49378-50232:-1:exon

PNAP_RS23190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23190
old locus tag: Pnap_4874
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRGKNSWIIILASLQLLVSLALAWAIVWGYAVSQAPLGQFFHSVAASIGAVSNVVGRTAETVEARQGLIEQTGKMLVSTRVLLQELRVAAENQVKLVPQYAGNMRAASEVSGKLGGTLQSVSEGLLFSVPTSIEMDGMKPVVKMSRPLEKYAQDLKTQAQDIKAVSQTLLDISVTMGRDGKNLSAAFVTTNQDALKVVDEVERTLGRLNTQDLPKALEDLRATAENLRAISEKVDIASDIGKVLLAVGLLLALWCALNSVSTLMLANALPADPKRNKLNLSGNP
SIO_010081: PNAP_RS23190
subclass of: SO_0000673
so part of: PNAP_RS23190
location: complement(49378..50232)
location: region:49378-50232:-1
so has part: feature:49378-50232:-1:exon

WP_011798309.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49378-50232:-1:exon

PNAP_RS23195
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23195
old locus tag: Pnap_4875
so part of: sequence
location: complement(50424..50852)
location: region:50424-50852:-1
so has part: feature:50424-50852:-1:exon
subclass of: SO_0000010

position:50424:-1
position: 50424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50852:-1
position: 50852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50424-50852:-1:exon

PNAP_RS23195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23195
old locus tag: Pnap_4875
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011465382.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2784 domain-containing protein
translation: MYFRFVADGVLLLHLVFIVFALFGGALAIRWRWMPLVHLPAMAWAFFVELTGRLCPLTSIENGFRVRAGQSGYAASFVEHYLLGVIYPSGLTREVQFVLAAMVVAINIAIYLWLFLRHRSYFKRRPCASRKEPTVVIGEQDI
SIO_010081: PNAP_RS23195
subclass of: SO_0000673
so part of: PNAP_RS23195
location: complement(50424..50852)
location: region:50424-50852:-1
so has part: feature:50424-50852:-1:exon

WP_011798310.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50424-50852:-1:exon

PNAP_RS26395
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS26395
old locus tag: Pnap_4876
so part of: sequence
location: 51142..52152
location: region:51142-52152:1
so has part: feature:51142-52152:1:exon
subclass of: SO_0000010

position:51142:1
position: 51142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52152:1
position: 52152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51142-52152:1:exon

PNAP_RS26395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS26395
old locus tag: Pnap_4876
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKDWRLEDISELCDEEIRTLRTNAECRGGACVIALCNTVLASRGNSRSTRNRRPVATQNGHPEMNSNAVDLVADLFRGLPIAANMPNAVRRQQLQARPIETLGELWRLFVVCGFSSQENSSENGPLANFFRKDGPLLSLDRVIKDGSKLEWVLAQLVGFGLRFTPNKALLVTGNLPFFAQSGSSSTRLDSLSQSGGPLSLFGRLSLDGSLRDSDREIARSATFSAALQDVPFPQIGQKQLRNILVNGGLSRNVVPLDSRWMNFLRPAFKGGKIKVERSRYLVYEQLLRDALISVIEQRPDLENLAIVDAVVFSIKDQSSTDALRPTAWFGAAEVL
SIO_010081: PNAP_RS26395
subclass of: SO_0000673
so part of: PNAP_RS26395
location: 51142..52152
location: region:51142-52152:1
so has part: feature:51142-52152:1:exon

WP_157040524.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51142-52152:1:exon

PNAP_RS26400
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS26400
old locus tag: Pnap_4877
so part of: sequence
location: complement(52493..53197)
location: region:52493-53197:-1
so has part: feature:52493-53197:-1:exon
subclass of: SO_0000010

position:52493:-1
position: 52493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53197:-1
position: 53197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52493-53197:-1:exon

PNAP_RS26400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS26400
old locus tag: Pnap_4877
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKSIAAVILSLTLSACVSNPPRPVVQIVKYDLRVNQSSRDEIFSDDVGISLKPIMLEKAVTTESLFASYNYWNPSNPKQNGKIRSILVSLPVFEVQVTNTSGQAVSFQKVAIRLVDDAGNSYQAQLKQDIIDFAGTQLDSMQSRGWAMDRAVALGAARNLKLLDKNYESLPGIIEKRILSFDIGNISNDNAYREMFKNTKYVRAMIYNVPVKFDQAGNVTKVAKFDFLFDVIKK
SIO_010081: PNAP_RS26400
subclass of: SO_0000673
so part of: PNAP_RS26400
location: complement(52493..53197)
location: region:52493-53197:-1
so has part: feature:52493-53197:-1:exon

WP_157040525.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52493-53197:-1:exon

PNAP_RS25295
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
gene: xseA
locus tag: PNAP_RS25295
old locus tag: Pnap_4878
so part of: sequence
location: 54079..55809
location: region:54079-55809:1
so has part: feature:54079-55809:1:exon
subclass of: SO_0000010

position:54079:1
position: 54079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55809:1
position: 55809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54079-55809:1:exon

PNAP_RS25295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
gene: xseA
locus tag: PNAP_RS25295
old locus tag: Pnap_4878
EC number: 3.1.11.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007857712.1
GO component: GO:0009318 - exodeoxyribonuclease VII complex [Evidence IEA]
GO function: GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO process: GO:0006308 - DNA catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: exodeoxyribonuclease VII large subunit
translation: MANIFLTVPFKDKDAAKGLGARWDAAQRQWFVPDGRELAPFALWLPAGLVPALNSGDVLSIPDEPGTPAMPVRNGVSLSSLLGDVSRAVAQAYKAGVWTLVEVVELRANGGHVYLEVSERDAHGAVLAKARAVIWQSTASAILPEFERATGAQLAPGIKLLVRARPVFKAQYGFSLDIDAIDPAYTLGELEARKRDIRTRLQAEGVFAANKNLPPPWDFHNVLVVSPMGGAGLGDFQAEADRLQAHGICRFTYALSRFQGEGAPAEIRDALQAALGQGTGTVATPFDAVVIIRGGGAVNDLAWLNDYSLARLVCDLPIPVLTGIGHERDTTLLDEVAHARYDTPSKVIAGIEQRILQRVDEVKANFEQVSALAARASQAAREQAGKLDMTVRLEALRHLAQGRQAASQSLAAIRIDAMQCMRSAAEQSRDALQAVKTKVLTQLADAKRGVPALWSQIALGSEHALRTASAEGDSFIGSVLERARQDASRARQVSSDALNTVSNSAKLLVRKAATDSQALIREIAGQGPEKTLQRGFAIVRNQSGKPLTRALQARDGAAIEIEFQDGRVAAITQKRL
SIO_010081: PNAP_RS25295
subclass of: SO_0000673
so part of: PNAP_RS25295
location: 54079..55809
location: region:54079-55809:1
so has part: feature:54079-55809:1:exon

WP_011798313.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54079-55809:1:exon

PNAP_RS28050
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS28050
old locus tag: Pnap_4879
so part of: sequence
location: 55817..56092
location: region:55817-56092:1
so has part: feature:55817-56092:1:exon
subclass of: SO_0000010

position:55817:1
position: 55817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56092:1
position: 56092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55817-56092:1:exon

PNAP_RS28050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS28050
old locus tag: Pnap_4879
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007857711.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAIESFKEAYGVLQQHAQTLRNQREPNIDDLLTIVTESVQAYKVCQLRIEAVEKALEKALSDTQAPPSSSLPALKTPAPAAIADDPDDIPF
SIO_010081: PNAP_RS28050
subclass of: SO_0000673
so part of: PNAP_RS28050
location: 55817..56092
location: region:55817-56092:1
so has part: feature:55817-56092:1:exon

WP_011798314.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55817-56092:1:exon

PNAP_RS23220
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23220
old locus tag: Pnap_4880
so part of: sequence
location: complement(56142..56549)
location: region:56142-56549:-1
so has part: feature:56142-56549:-1:exon
subclass of: SO_0000010

position:56142:-1
position: 56142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56549:-1
position: 56549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56142-56549:-1:exon

PNAP_RS23220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23220
old locus tag: Pnap_4880
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798500.1
GO function: GO:0003697 - single-stranded DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: single-stranded DNA-binding protein
translation: MIEALISGKLQGQASEKMAKTGKSFVTAKVRVHAGDTDVFVNVIAFSESACTALLALDSGDAVALAGSLTPKTWTDREGTVRPALDLVASQVLTAYHVARKRKAVEPRAHEQSRHQQANQASRRDDLDDGCPLEF
SIO_010081: PNAP_RS23220
subclass of: SO_0000673
so part of: PNAP_RS23220
location: complement(56142..56549)
location: region:56142-56549:-1
so has part: feature:56142-56549:-1:exon

WP_011798315.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56142-56549:-1:exon

PNAP_RS23225
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23225
old locus tag: Pnap_4881
so part of: sequence
location: complement(56811..57206)
location: region:56811-57206:-1
so has part: feature:56811-57206:-1:exon
subclass of: SO_0000010

position:56811:-1
position: 56811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57206:-1
position: 57206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56811-57206:-1:exon

PNAP_RS23225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23225
old locus tag: Pnap_4881
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012345151.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TfoX/Sxy family protein
translation: MTARPDEFAQYCCELLAAAGPCTARHMFGGYGISTDGLTLGLLADLGQGATLWLKAGPDTRAVFEAAGCQRFTYQAKGKTRSLGYYSAPDEAMESARDMAPWARLALEVALAARQPKKAKPSKKKQPTGDD
SIO_010081: PNAP_RS23225
subclass of: SO_0000673
so part of: PNAP_RS23225
location: complement(56811..57206)
location: region:56811-57206:-1
so has part: feature:56811-57206:-1:exon

WP_011798316.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56811-57206:-1:exon

PNAP_RS23230
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23230
old locus tag: Pnap_4882
so part of: sequence
location: 57338..57604
location: region:57338-57604:1
so has part: feature:57338-57604:1:exon
subclass of: SO_0000010

position:57338:1
position: 57338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57604:1
position: 57604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57338-57604:1:exon

PNAP_RS23230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23230
old locus tag: Pnap_4882
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007586745.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cupin
translation: MEREEFTQILAREGFKEVVTVTREPDGFLDAHTHPFEAKALILRGELQIKTGSAEQTYQAGQVFHLFADEPHSETYGPEGVAYLVGRK
SIO_010081: PNAP_RS23230
subclass of: SO_0000673
so part of: PNAP_RS23230
location: 57338..57604
location: region:57338-57604:1
so has part: feature:57338-57604:1:exon

WP_011798317.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57338-57604:1:exon

PNAP_RS23235
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23235
old locus tag: Pnap_4883
so part of: sequence
location: 57852..58097
location: region:57852-58097:1
so has part: feature:57852-58097:1:exon
subclass of: SO_0000010

position:57852:1
position: 57852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58097:1
position: 58097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57852-58097:1:exon

PNAP_RS23235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23235
old locus tag: Pnap_4883
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011463063.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDELKNLESLGLVLPSPAYIIGAILFGIVGYAAFRRGRKTSTSSLTWTGVALMVYPYAVPQTWLLWVVGVALCGWLYAKWN
SIO_010081: PNAP_RS23235
subclass of: SO_0000673
so part of: PNAP_RS23235
location: 57852..58097
location: region:57852-58097:1
so has part: feature:57852-58097:1:exon

WP_011798318.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57852-58097:1:exon

PNAP_RS23240
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23240
old locus tag: Pnap_4884
so part of: sequence
location: 58609..59103
location: region:58609-59103:1
so has part: feature:58609-59103:1:exon
subclass of: SO_0000010

position:58609:1
position: 58609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59103:1
position: 59103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58609-59103:1:exon

PNAP_RS23240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23240
old locus tag: Pnap_4884
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVAAYKPRFTPISYDGIDINTPAAELPEFLERIAERGGYDPRTGKLTPFKSISDDFDECMINQMLDSMTAAVEAGLGTPATFFKDFFTTEQDVQNFADALDDYSAEETFWVNDRHFNAFIHATNSSEENAVTYPAMAGHIRELFESEREKAKKTAKPTYKKNVN
SIO_010081: PNAP_RS23240
subclass of: SO_0000673
so part of: PNAP_RS23240
location: 58609..59103
location: region:58609-59103:1
so has part: feature:58609-59103:1:exon

WP_011798319.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58609-59103:1:exon

PNAP_RS23245
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23245
old locus tag: Pnap_4885
so part of: sequence
location: 59235..59714
location: region:59235-59714:1
so has part: feature:59235-59714:1:exon
subclass of: SO_0000010

position:59235:1
position: 59235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59714:1
position: 59714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59235-59714:1:exon

PNAP_RS23245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23245
old locus tag: Pnap_4885
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRPEIAEHLAQVSAWLDENVVSYPTPAAITLSDIQMNWTDLSGSFILSLDGKEVPDRFVFSLDGTEWLKFFMPMFTSPLGAPASYAAVEFTEETRVAMEDGLRILMPKLAGFGQDRVTGDWVHQSTPWEARVMDTSAFEQARQRIEVGGYSITVPTKHI
SIO_010081: PNAP_RS23245
subclass of: SO_0000673
so part of: PNAP_RS23245
location: 59235..59714
location: region:59235-59714:1
so has part: feature:59235-59714:1:exon

WP_011798320.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59235-59714:1:exon

PNAP_RS23250
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23250
old locus tag: Pnap_4886
so part of: sequence
location: 60019..60363
location: region:60019-60363:1
so has part: feature:60019-60363:1:exon
subclass of: SO_0000010

position:60019:1
position: 60019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60363:1
position: 60363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60019-60363:1:exon

PNAP_RS23250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23250
old locus tag: Pnap_4886
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011802861.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: H-NS histone family protein
translation: MTQATTLQQQIQEAEAIVKELRKQLDEERKGERMQAVASAKELIKTHGLTAADLGFSGKGSSAKRPAGDKRGVVAAKYQDHESGKTWTGRGKSPAWLAAQLAAGYTKDDFLIKS
SIO_010081: PNAP_RS23250
subclass of: SO_0000673
so part of: PNAP_RS23250
location: 60019..60363
location: region:60019-60363:1
so has part: feature:60019-60363:1:exon

WP_011798321.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60019-60363:1:exon

PNAP_RS23255
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23255
old locus tag: Pnap_4887
so part of: sequence
location: complement(60826..61050)
location: region:60826-61050:-1
so has part: feature:60826-61050:-1:exon
subclass of: SO_0000010

position:60826:-1
position: 60826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61050:-1
position: 61050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60826-61050:-1:exon

PNAP_RS23255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23255
old locus tag: Pnap_4887
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011548443.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0097351 - toxin sequestering activity [Evidence IEA]
GO process: GO:0001558 - regulation of cell growth [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system PrlF family antitoxin
translation: MSQSTLNSKGQITIPADIRRALGLVDHDRLTLTLMPNGTVLLRAKNKSILDLKGMLPTASGISVSIEEMSMGSA
SIO_010081: PNAP_RS23255
subclass of: SO_0000673
so part of: PNAP_RS23255
location: complement(60826..61050)
location: region:60826-61050:-1
so has part: feature:60826-61050:-1:exon

WP_011798322.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60826-61050:-1:exon

PNAP_RS26405
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS26405
old locus tag: Pnap_4888
so part of: sequence
location: 61259..61846
location: region:61259-61846:1
so has part: feature:61259-61846:1:exon
subclass of: SO_0000010

position:61259:1
position: 61259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61846:1
position: 61846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61259-61846:1:exon

PNAP_RS26405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS26405
old locus tag: Pnap_4888
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPSTTFCPTSVSAPQLSSVLRKRGKTPTTVDFLKLAKAAAWFDTDEEACETLQNAGFTCTPRVVEKLLSASKFIWMTCANQAHDIFLKSLGDAPQLTCRLPRLRNRTGRCYELAYRGCCQGNKWTVIHGETIGPHGIGRMGHAWLENNGWVYDPVLDRTMHSDVYVLLVGVLVFKRFTVWEMHNEAAKCGHYGPW
SIO_010081: PNAP_RS26405
subclass of: SO_0000673
so part of: PNAP_RS26405
location: 61259..61846
location: region:61259-61846:1
so has part: feature:61259-61846:1:exon

WP_011798323.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61259-61846:1:exon

PNAP_RS23260
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23260
old locus tag: Pnap_4889
pseudo: true
so part of: sequence
location: <61922..62161
location: region:61922-62161:1
so has part: feature:61922-62161:1:exon
subclass of: SO_0000010

position:61922:1
position: 61922
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:62161:1
position: 62161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61922-62161:1:exon

PNAP_RS23260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23260
old locus tag: Pnap_4889
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012316909.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: PNAP_RS23260
subclass of: SO_0000673
so part of: PNAP_RS23260
location: <61922..62161
location: region:61922-62161:1
so has part: feature:61922-62161:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:61922-62161:1:exon

PNAP_RS25300
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS25300
old locus tag: Pnap_4890
so part of: sequence
location: complement(62249..62626)
location: region:62249-62626:-1
so has part: feature:62249-62626:-1:exon
subclass of: SO_0000010

position:62249:-1
position: 62249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62626:-1
position: 62626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62249-62626:-1:exon

PNAP_RS25300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS25300
old locus tag: Pnap_4890
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: transcriptional regulator
translation: METTYGLRLKQAYKHAGLTQVQLASAAGLSQAAISEACRVGTGSAYTVQFARACGVDAFWLATGDGEMEPATLSPRALYIARELDRKEPPEQRDRLYAIFMQLLDFSANDTVPTKHSGAVLGNGI
SIO_010081: PNAP_RS25300
subclass of: SO_0000673
so part of: PNAP_RS25300
location: complement(62249..62626)
location: region:62249-62626:-1
so has part: feature:62249-62626:-1:exon

WP_049763832.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62249-62626:-1:exon

PNAP_RS23270
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23270
old locus tag: Pnap_4891
so part of: sequence
location: complement(62792..64600)
location: region:62792-64600:-1
so has part: feature:62792-64600:-1:exon
subclass of: SO_0000010

position:62792:-1
position: 62792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64600:-1
position: 64600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62792-64600:-1:exon

PNAP_RS23270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23270
old locus tag: Pnap_4891
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020183294.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAIVLTRLAATGSNLPTAEIIFAPNRNLIRGPSDTGKSYLRDCLWYMLGGDKLPKTFPESEGYQSLSLTFLSGNCEFVVHRGLAGGADAVFVREINTVANVAAERLDVNTGELLVQLSGAKGKKVLRSTSEKGDITGDDLRHWFLLSQPTVISEDGTSGTGFSATKHISSFNLFLTGDDDAGIELRKTTAEVERIKGQLSSAEDGLKRIQVGLPGNAVRDDVAEALEHVDTALSAMSSHYEARASQLKELRSQITTASENLFQTTSAYGHSASMVERFQLLDKKYLSDLQRLGASSEGIAFFQALPETPCPLCGTPIEQQVDLKELNPGRPQRYREAIAAEAEKIRILRCGLLVSLENERGRVAALKLSEASYSQELATLQNHEIQQLTAIRLEFSGDPKTLAVRRSELSAQLAIFDEMERLNAEVDRLGKLKIRPHIRVNRETGAAALAVGKLAKALLTEWGFTSVETVVLDPAACDLVIDGRARLSYGAGKRAIFLTAMTVAMLHNSLESNYPHLGVVVIDSPLKAYADPTLTDSNDVALSTVTDNFYDWLAKWEGPGQVVILENEEIRAETAKVLKPIEFTGTRGSGRTGFYPEGIEGT
SIO_010081: PNAP_RS23270
subclass of: SO_0000673
so part of: PNAP_RS23270
location: complement(62792..64600)
location: region:62792-64600:-1
so has part: feature:62792-64600:-1:exon

WP_011798326.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62792-64600:-1:exon

PNAP_RS23275
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23275
old locus tag: Pnap_4892
so part of: sequence
location: complement(64585..65088)
location: region:64585-65088:-1
so has part: feature:64585-65088:-1:exon
subclass of: SO_0000010

position:64585:-1
position: 64585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65088:-1
position: 65088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64585-65088:-1:exon

PNAP_RS23275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23275
old locus tag: Pnap_4892
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017509747.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKASPIAVFNSPFELGLRMVYLLCSLRPFGADLQKLVLLDYAIVYSGDLSGPSSLHTPVPYRGSELLSRRELIEQGLYIMSTRGLVDATLDETGITYVAGASALAMVGSLTSAYFLELETRCRWAASEFSKFDSTDLTDRFAANGHLWGAELEVTMAKRGNQWQLS
SIO_010081: PNAP_RS23275
subclass of: SO_0000673
so part of: PNAP_RS23275
location: complement(64585..65088)
location: region:64585-65088:-1
so has part: feature:64585-65088:-1:exon

WP_011798327.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64585-65088:-1:exon

PNAP_RS23280
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23280
old locus tag: Pnap_4893
so part of: sequence
location: complement(65085..66152)
location: region:65085-66152:-1
so has part: feature:65085-66152:-1:exon
subclass of: SO_0000010

position:65085:-1
position: 65085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66152:-1
position: 66152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65085-66152:-1:exon

PNAP_RS23280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23280
old locus tag: Pnap_4893
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020071128.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MATSTTKVRKTRKNQLVVRQGAMPPAAQVMHFSPDEWEKFIEAACFLRPLRGQTHYVQVKQLGGAGDGGRDIEARLIQPLQQDGWDLFQAKHYDHGLTPGDAFPELAKFFKHLSFGTYPQPKHYYFCSPKNAGVTLHDLLATPVRMKEQFLREWAAGDKGLKAAELTPAVTAVVSAFDFSRIRECLVRDLLAWHALDQGLHFERFGIETERGADPTMPGAPGVHEQVYIEQLIRVYSEHSATPMTLADVEAALAYADDFESQRAAFYCAEGLKRFSRDLYTEDEFDRLLAMVLSGIKPSVNSVALKTGMDRLTVALNTVSKLGVTDSKLSTRLRGGDLPGTCHHLVNENKMKWLK
SIO_010081: PNAP_RS23280
subclass of: SO_0000673
so part of: PNAP_RS23280
location: complement(65085..66152)
location: region:65085-66152:-1
so has part: feature:65085-66152:-1:exon

WP_011798328.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65085-66152:-1:exon

PNAP_RS23285
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
gene: imuA
locus tag: PNAP_RS23285
old locus tag: Pnap_4894
so part of: sequence
location: 66377..67198
location: region:66377-67198:1
so has part: feature:66377-67198:1:exon
subclass of: SO_0000010

position:66377:1
position: 66377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67198:1
position: 67198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66377-67198:1:exon

PNAP_RS23285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
gene: imuA
locus tag: PNAP_RS23285
old locus tag: Pnap_4894
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011793696.1
GO process: GO:0051782 - negative regulation of cell division [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translesion DNA synthesis-associated protein ImuA
translation: MSTVHRIEKALAASPAEYTSRRAGLARLAPAVARALWWGTEMGTVAHAVVPTGFASLDAELPGGGWPCQSLTELLQPQPSLCEWRLLAPSLKALVRDGGHILLVGPPKRPHVPGLVQLGLPAQSLIWFAADTPSERLWTTEQLIQANPRGAILAWLPQVRPEQLRRLQVHAQSCDCPVFVFRPELARRDASPAPLRLVASFGVDWELHIQILKRQGSPHEGNLRLPCIPGLLAEVLTPHLLRPSQLMSRMEASHVNALGSAAAAPAPRHVVSH
SIO_010081: PNAP_RS23285
subclass of: SO_0000673
so part of: PNAP_RS23285
location: 66377..67198
location: region:66377-67198:1
so has part: feature:66377-67198:1:exon

WP_011798329.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66377-67198:1:exon

PNAP_RS23290
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23290
old locus tag: Pnap_4895
so part of: sequence
location: 67143..68468
location: region:67143-68468:1
so has part: feature:67143-68468:1:exon
subclass of: SO_0000010

position:67143:1
position: 67143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68468:1
position: 68468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67143-68468:1:exon

PNAP_RS23290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23290
old locus tag: Pnap_4895
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019702945.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase Y family protein
translation: MHWAALLLHLPPGTSSAIDAGSLAVWALQFTPRVARLEEAVVLEAAQSIRLFGGELPLHEQVEQGARALGVAFTAWAPTSLAALALARAGVADGFARPLTQLLDPLPFAVLSAVNVHAATLARLGCRTLADVRRLPRGGIGRRFDAALLAALDQAYGLRPEVYDWVALPVTFAARLELPGRVETTAGLLFGARRLLLQLGGWLAARHAGVTAFTFRWRHDTLRAQSAGEGCELLIRTAEPTQSVERLGRLLAEHLAHVQLLAPALELELLATGVSPMAENNHSLLFDAARQGESLGQALERVEARLGKRRVLRPRLVADHRLEWMQRWQSLDTPVLGAGLSPAQAPQPTWMLRTPLRLATSQDRPLYQGPLLLLLGPERIEGGWWHRAEGKNGQESEEVAKDFNVQRDYWVALSAHAGVLWIFQQRLGREQTAWYLHGHFS
SIO_010081: PNAP_RS23290
subclass of: SO_0000673
so part of: PNAP_RS23290
location: 67143..68468
location: region:67143-68468:1
so has part: feature:67143-68468:1:exon

WP_157040539.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67143-68468:1:exon

PNAP_RS23295
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23295
old locus tag: Pnap_4896
so part of: sequence
location: 68478..71603
location: region:68478-71603:1
so has part: feature:68478-71603:1:exon
subclass of: SO_0000010

position:68478:1
position: 68478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71603:1
position: 71603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68478-71603:1:exon

PNAP_RS23295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23295
old locus tag: Pnap_4896
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019702946.1
GO function: GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: error-prone DNA polymerase
translation: MATAAALPALSALPDYAELRCISNFTFLNGASRPEELVLRARELGYRALALTDECSLAGIVRAHGAAREAGLALLVGAQFLVADDAPFTLTVLVCNLNGYGNLCQYITRLRRSSEKGHYRLARDSIQGADLVDCVVLVSPGRTSSAEQLLQLGRWSLLHFTGRCWFGVELLRRLGDAMWLHRMREVSAATAIALVAVGDVCMHVRSRKPLQDVLTATRLGKRLTDCGFELQSNAERHLRSRLRLAQTYPAALLAETLKVASHCNFSLDELKYQYPQEVVPPDETPAAYLRRMTYEGAGRRWPHGIEAQVQQQIEHELALIGELRYEPYFLTVYDIVAFARSRHILCQGRGSAANSVVCYCLGVTEVDPARMSVLFERFISRERNEPPDIDIDFEHERREEVIQYLYQKYGRDRAALTATVMTYRPRSAIRDVGKALGFDLATLDLLAKSHQWWDGGQVDAERLTALGLFPDDLAVQQLMLLTTQLMGFPRHLSQHTGGFVLTRGLLSRMVPIENASMPGRTVIQWDKDDLDATGLLKVDVLALGMLTALRKALEFVGARRGHSFEMQDIPPEDPATYEMMCQADTVGVFQIESRAQQGMLPRLQPRCFYDLVIEVAIVRPGPIQGGMVHPYLARRQGREAVSYPSEALREALGRTLGVPVFQEQVMQLAILAAGFTPGEADGLRRAMAAWKRKGGLAQYYDRIVGGMTARGYEKEFAVAIFEQIKGFSEYGFPESHAASFALLVYASAWLKRAEPAAFLAALLNAQPLGFYAPSQLVQDARRHGVEVRPIDVMASDIDATLEDLPQVPAVRLGLRLVAGLGRLAAARIVAARMDCPFESAEDLSMRADLALHEMKLLAASDALASLSGHRRQQVWDASALHAAPALLRAAPVDEELLELPEAPEGEAIGWDYAATGLTLRRHPMALLRARLVKHRFLSSGELREHPDGQMVRTCGMVTLRQQPPAANGTVFVSLEDEDGAIQVIVFKRLREKQREVLLDSRLLGVYGQWQRDGGVRNLVAHRLVDLSRWLGMLEVSSRGFK
SIO_010081: PNAP_RS23295
subclass of: SO_0000673
so part of: PNAP_RS23295
location: 68478..71603
location: region:68478-71603:1
so has part: feature:68478-71603:1:exon

WP_011798331.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68478-71603:1:exon

PNAP_RS23300
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23300
so part of: sequence
location: complement(71807..72037)
location: region:71807-72037:-1
so has part: feature:71807-72037:-1:exon
subclass of: SO_0000010

position:71807:-1
position: 71807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72037:-1
position: 72037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71807-72037:-1:exon

PNAP_RS23300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23300
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMLISENSTTPSNQALLDELKSEVAQFLASPLTERFTLVSPNGGLRTEVRAISLNRLPQETQDVRLDRLSTSAFSR
SIO_010081: PNAP_RS23300
subclass of: SO_0000673
so part of: PNAP_RS23300
location: complement(71807..72037)
location: region:71807-72037:-1
so has part: feature:71807-72037:-1:exon

WP_041377720.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71807-72037:-1:exon

PNAP_RS23305
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23305
old locus tag: Pnap_4897
so part of: sequence
location: complement(72067..73236)
location: region:72067-73236:-1
so has part: feature:72067-73236:-1:exon
subclass of: SO_0000010

position:72067:-1
position: 72067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73236:-1
position: 73236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72067-73236:-1:exon

PNAP_RS23305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23305
old locus tag: Pnap_4897
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTKLSDTLATGWRRLVDAINWVFATAWMGAIIPFFSIGVGFAWSSWKEQIADSFLVMARPGDANFDVKSTFFWLLCLLLLLLGIGNTWAKNRDSARSAAEVKALLARLQEQSQQHTAAVSQLHSLPPLGVLEDFHQAYNLCDNISIKSLQLNTAVSTALSDHEAALRTFMSVVGRVIQTFDGEHFLSSNVRYGLNIMLFVTKQEYEARPLKAALATRLRFADKGLSLDNAAGVLDMLPAVSIADGMEMPDSELEHFAIPIADVPVYASKASKERPALPGATHCCVNIIHVAYESIDAFRKALEDLQADDGVKAEMLSYFEKPNIRSSVQSFLCVPLIASDTGLVGVLNIHRDTANPRIKDRMALLVPLLAPMRQQLARLLLKYKSLYLS
SIO_010081: PNAP_RS23305
subclass of: SO_0000673
so part of: PNAP_RS23305
location: complement(72067..73236)
location: region:72067-73236:-1
so has part: feature:72067-73236:-1:exon

WP_011798332.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72067-73236:-1:exon

PNAP_RS23310
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23310
old locus tag: Pnap_4898
so part of: sequence
location: 73769..74188
location: region:73769-74188:1
so has part: feature:73769-74188:1:exon
subclass of: SO_0000010

position:73769:1
position: 73769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74188:1
position: 74188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73769-74188:1:exon

PNAP_RS23310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23310
old locus tag: Pnap_4898
inference: COORDINATES: protein motif:HMM:NF024830.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4113 domain-containing protein
translation: MVLIRPSSDTAVVVKAALVGLRLIYQFGFLYAKAGVMLVELRPQALRQDELDISAGFMPISQMAGAGRLEEELVAQSPPLRDRAKLMAKLDALNGRYGRGTLRFAAAGLENDQQAWAMKQVRRSPGYTTCWADMLIVRM
SIO_010081: PNAP_RS23310
subclass of: SO_0000673
so part of: PNAP_RS23310
location: 73769..74188
location: region:73769-74188:1
so has part: feature:73769-74188:1:exon

WP_198140742.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73769-74188:1:exon

PNAP_RS23315
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23315
old locus tag: Pnap_4899
pseudo: true
so part of: sequence
location: 74611..75294
location: region:74611-75294:1
so has part: feature:74611-75294:1:exon
subclass of: SO_0000010

position:74611:1
position: 74611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75294:1
position: 75294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74611-75294:1:exon

PNAP_RS23315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23315
old locus tag: Pnap_4899
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011486036.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DNA/RNA non-specific endonuclease
SIO_010081: PNAP_RS23315
subclass of: SO_0000673
so part of: PNAP_RS23315
location: 74611..75294
location: region:74611-75294:1
so has part: feature:74611-75294:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:74611-75294:1:exon

PNAP_RS27400
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS27400
so part of: sequence
location: 75704..76096
location: region:75704-76096:1
so has part: feature:75704-76096:1:exon
subclass of: SO_0000010

position:75704:1
position: 75704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76096:1
position: 76096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75704-76096:1:exon

PNAP_RS27400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS27400
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTFLVPYAVGFALVLGACIARHLGKSSSILSPDDFNFGMTASLAGLLLVLDAKLTGQTSLAARTGGVYLAGVALVLSLFFTLAMARKLDAFVKANSTSDKRHGFGYWGPWFASNLAGSFCVVLTVWLKLP
SIO_010081: PNAP_RS27400
subclass of: SO_0000673
so part of: PNAP_RS27400
location: 75704..76096
location: region:75704-76096:1
so has part: feature:75704-76096:1:exon

WP_157040526.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75704-76096:1:exon

PNAP_RS23320
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23320
old locus tag: Pnap_4900
so part of: sequence
location: complement(76772..78175)
location: region:76772-78175:-1
so has part: feature:76772-78175:-1:exon
subclass of: SO_0000010

position:76772:-1
position: 76772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78175:-1
position: 78175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76772-78175:-1:exon

PNAP_RS23320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23320
old locus tag: Pnap_4900
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTTPNPRDPDDLEPDVTDEMDERLVHRKLADILTVSPAEAKAWANSERIELASLIRSFKPRAGQSSTRNWLSTAMVSLPLDHVTLDVEFSMRAPATATLKYQTAAGTDADDVFTHIHAQNRANVCQDLFEELTRKQQLTYAPLVKWGKLRTADAKRHERLEDVQIADSINVLEDQFEKRYLTYEREARAEHNFSVDQPTPLRLVRFFAEEARDDVLVTVKRWVSTAGSGDNIVLRTLCNIAANRALLESAKAGTLAQEGASAIIALLNAINQVGIFEAPEVSNDTDIKNLLLQWFGSDGPLATAGNSKRGLTPREVEAAIRQAAQAQREYVYLRPASDDPLAETAFKTPNDRLMFALALIADRQMNQRVDKEQKGEGTPKYVVFDPKAEELGVHALTMVMRQYGQIAFSNAAWELRADRVKDYVDALSYKRARRQEMVFKVFKRMEVDKLLTVHNTLMQHVPELRNA
SIO_010081: PNAP_RS23320
subclass of: SO_0000673
so part of: PNAP_RS23320
location: complement(76772..78175)
location: region:76772-78175:-1
so has part: feature:76772-78175:-1:exon

WP_011798335.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76772-78175:-1:exon

PNAP_RS27405
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS27405
so part of: sequence
location: complement(78232..78564)
location: region:78232-78564:-1
so has part: feature:78232-78564:-1:exon
subclass of: SO_0000010

position:78232:-1
position: 78232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78564:-1
position: 78564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78232-78564:-1:exon

PNAP_RS27405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS27405
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKEKIALKRPHTSVMPATLDHYHAVQSIRTFGAIKHASAVAHALLATGHAHSESEAVAMANDEVTRVERIDQGILVNRLAHQQLQAEQDQQLKRTNHMHATAMPATSLPA
SIO_010081: PNAP_RS27405
subclass of: SO_0000673
so part of: PNAP_RS27405
location: complement(78232..78564)
location: region:78232-78564:-1
so has part: feature:78232-78564:-1:exon

WP_157040527.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78232-78564:-1:exon

PNAP_RS27800
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS27800
old locus tag: Pnap_4902
so part of: sequence
location: complement(78798..79193)
location: region:78798-79193:-1
so has part: feature:78798-79193:-1:exon
subclass of: SO_0000010

position:78798:-1
position: 78798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79193:-1
position: 79193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78798-79193:-1:exon

PNAP_RS27800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS27800
old locus tag: Pnap_4902
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRRWPAAGVADGFARPLAQLLDPLPFAVLSAVNVHAATLARLGCRTLADVRRLPRSGIGRRFDAALLAALDQAYGLRPEVYDWVALPATFTARLELPGRVETSAGLLFGARRLLLQLGSWHHGVHPALASR
SIO_010081: PNAP_RS27800
subclass of: SO_0000673
so part of: PNAP_RS27800
location: complement(78798..79193)
location: region:78798-79193:-1
so has part: feature:78798-79193:-1:exon

WP_049763833.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78798-79193:-1:exon

PNAP_RS25310
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS25310
old locus tag: Pnap_4903
so part of: sequence
location: complement(79379..79612)
location: region:79379-79612:-1
so has part: feature:79379-79612:-1:exon
subclass of: SO_0000010

position:79379:-1
position: 79379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79612:-1
position: 79612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79379-79612:-1:exon

PNAP_RS25310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS25310
old locus tag: Pnap_4903
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTDKQNLDWALQVQILKRRGGSHEGILTLPSIPGMLAEVLTPCLLRPSQLMSRMEASHVNALGSAAATPACRHVVSH
SIO_010081: PNAP_RS25310
subclass of: SO_0000673
so part of: PNAP_RS25310
location: complement(79379..79612)
location: region:79379-79612:-1
so has part: feature:79379-79612:-1:exon

WP_049763834.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79379-79612:-1:exon

PNAP_RS23335
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23335
old locus tag: Pnap_4904
so part of: sequence
location: complement(79641..80123)
location: region:79641-80123:-1
so has part: feature:79641-80123:-1:exon
subclass of: SO_0000010

position:79641:-1
position: 79641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80123:-1
position: 80123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79641-80123:-1:exon

PNAP_RS23335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23335
old locus tag: Pnap_4904
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017455068.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTSRLKAVIDELYRPAQRRKVFALSRAEAESLPRLPTTAVISITAPERPPANLDGFEHLLRLSFADVDHLGIELSARAREKVSKAFTVDQAEQVLSFVTGLPPGILSIVAHCEGGYSRSCAVAYVLNELYGYTVEFERLQNANPSVVKMLRKAAATHTKR
SIO_010081: PNAP_RS23335
subclass of: SO_0000673
so part of: PNAP_RS23335
location: complement(79641..80123)
location: region:79641-80123:-1
so has part: feature:79641-80123:-1:exon

WP_011798339.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79641-80123:-1:exon

PNAP_RS23340
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23340
old locus tag: Pnap_4905
so part of: sequence
location: 80664..82586
location: region:80664-82586:1
so has part: feature:80664-82586:1:exon
subclass of: SO_0000010

position:80664:1
position: 80664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82586:1
position: 82586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80664-82586:1:exon

PNAP_RS23340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23340
old locus tag: Pnap_4905
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKIVAALVSGLLCACAHAQIQWEVENRFPFFTKEAFRSLEDAVGDNPINLETRITQLKLRDQVNHLKESAWNPETGKHDAARILSPSVRISGRTAWLDPACEWSLTNSAGQSVQKVSGPCQVGPWLEATIGEPTTLSVRKPTGEQFEQAVLVKKRLVVAIGDSFASGEGNPDYSAKFEWSPDSSLLKRPAHTWMLNPNDIRKLKIVNAQWLDTKCHRSIMAWPSLYALQQALTNKDTVVQFASFACSGAEIMDGFYLPQKNTPGTAGTKLSPSREDKFLKFSQQEALARFLCPTNPVPTDLEVSRKIAQTYLNPYYNNNENDAKKVTMWKCAAPLKPDELLVLFGGNDTKFSGIVKYVFHPAKLAYNLPVVGFLMDKAIKLALTPVPPEDAKKYLQLLPENYGYLRAGLEGFVEQGKTKVRMLQYPDPASNDLAHNEAAKELRACQLRTGDANRPIQQMIASQLPGPFKNEGAWYGISPKKLTQIREQYVDPLRKLQLSSTSEFGWELVDSLPAFHNHGICGGTLECESAGENCRNSDRVRWAYFTDIQYVRAPNSCPMKNLLVFNPYDDQQGRGLRLANDAALVAARVAPNGSLYLDWVNNMAHPTAAAHARVASLVAGKPLVPAAPEPAQPWLACAN
SIO_010081: PNAP_RS23340
subclass of: SO_0000673
so part of: PNAP_RS23340
location: 80664..82586
location: region:80664-82586:1
so has part: feature:80664-82586:1:exon

WP_011798340.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80664-82586:1:exon

PNAP_RS23345
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23345
old locus tag: Pnap_4906
so part of: sequence
location: complement(82892..84841)
location: region:82892-84841:-1
so has part: feature:82892-84841:-1:exon
subclass of: SO_0000010

position:82892:-1
position: 82892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84841:-1
position: 84841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82892-84841:-1:exon

PNAP_RS23345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23345
old locus tag: Pnap_4906
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007852771.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MSAVPILANNDRDAGVVEEICGYLTEEPPRSYFLFAGAGSGKTRTLVEVLRRLTGVLKHEKGEQLARRLRTYGRSIRVVTYTKNAVAVINGRLGDNDLVGVSTIHSFCWELISGFNDDIREALIAVKEAQLEKETAKAQAKPRGITAAKQRDLDEIKADIEGFRTTDVFMYHPDRNTYGPGALAHKNVLDAAAWLLCNKPTLQTILRDRHPIVLIDESQDTIKGMLDALMGLAEPRGSGLTLGLLGDHRQRIYTDGHSDLPNLVPQSWATPELQMNHRSQGRIVTLINRIWKAELDGRTQPTTGVEQHPRIEKTGGVVRLYVGDTSLSPEDKVRRERWCADQMREASGAAAWGTGQYQLLALEHKLVATRGSFLDVYQAMVLLDPNAAAPAGSGDNKGPAAVQVMLNELAHLEACVGADGALNEFLATEVFRRHGSLDNIPEDPATRAARVDEMLKAMAAFVAACTDEKSTAEDVLFPVLSANLFEFDHRLSAAYADKSPPPAAPGRGEEESKQARMRRGWCALFDAPWNQLKRYRTYLAGNSVLATHQVVKGSEFMHVMVVMDDAVAGGNQISYDKIFGGTQLSKGDRENVDKGKETTIDRTLRLLYVTCSRAQESLALVLWSSDQEAALTRIKESGWFTDDEFQAIQ
SIO_010081: PNAP_RS23345
subclass of: SO_0000673
so part of: PNAP_RS23345
location: complement(82892..84841)
location: region:82892-84841:-1
so has part: feature:82892-84841:-1:exon

WP_011798341.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82892-84841:-1:exon

PNAP_RS23350
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23350
old locus tag: Pnap_4907
so part of: sequence
location: complement(84838..87147)
location: region:84838-87147:-1
so has part: feature:84838-87147:-1:exon
subclass of: SO_0000010

position:84838:-1
position: 84838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87147:-1
position: 87147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84838-87147:-1:exon

PNAP_RS23350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23350
old locus tag: Pnap_4907
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009685257.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MPAASAATPVSGDITLRFLEFCQFRRLGKVQLDIDKKTTILVGANNSGKTSVLAALRHFLADGSAFGAFDISLSQWPKLRALGKAWEALTEDPSTMTGSEDQWKEQLETILSAMPTLDLWFDAGAGMYHYVAPFLSKFSWKGGAVGVRLRLEPAVSIDELKQLAWTYHTARLPVKDMGADSLAWPIDLLDFWLREPSKLGQVRAYKLNVDNNPLEGLKAYATQTLPADASPIERKHLSKLIRVDFVAAQRGLGSEEADSRSASGAHRVGMFSNQLLKFARQHLNIASTGHGHRADLIKAVAEAQQELDKKIHEAIAPSVEEVKELGYPGLHDPQEIRFRTRIQTADLLDHGTAVQYSMQKDSLEELLPEYSIGLGYQNLQSLSYQLVSFKAARLKPEKGSPAPVHLVMIEEPEAHLHVQVQRIFPDKAHKLISPTEKEASALKSQLLISTHSSHLAHAENFDRLRYVRRIAKSAANPMPTTEVVNLGKVFGEDKKTRQFAERYFRVQHTDLLFANAAIFVEGLAERMLVPLFIERDFKTLNSRYVSFLDIGGSHAHRLKPLVEKLRIPTVIITDIDPTEEKAGKPKKNGEPTTTLVAVANTGQAGLHCGNPTLRGWHPKLQKLNDFKNPTEAQLVWNETAECLVRFCWQLPVAEAEGNWPSTFEDSLVLTNMVWFKGLLDEKVDDDGVKIKPPKGALGSVATQVADAPSVPDLVGALHKLMHDSFNKGDFAASIFEMVSTEEPVVCPKYIADALDWLQKQLEPNQDVMA
SIO_010081: PNAP_RS23350
subclass of: SO_0000673
so part of: PNAP_RS23350
location: complement(84838..87147)
location: region:84838-87147:-1
so has part: feature:84838-87147:-1:exon

WP_011798342.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84838-87147:-1:exon

PNAP_RS23355
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23355
old locus tag: Pnap_4908
so part of: sequence
location: 87667..87915
location: region:87667-87915:1
so has part: feature:87667-87915:1:exon
subclass of: SO_0000010

position:87667:1
position: 87667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87915:1
position: 87915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87667-87915:1:exon

PNAP_RS23355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23355
old locus tag: Pnap_4908
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011831930.1
GO function: GO:0003676 - nucleic acid binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cold shock domain-containing protein
translation: MTTLNLSAVPLQEGTVARLNPKAGFGYVRDQSGANEYIFVFGFALKHSQAKNLSVGKAVHFRVSGQGRVDKLLFDERVQTER
SIO_010081: PNAP_RS23355
subclass of: SO_0000673
so part of: PNAP_RS23355
location: 87667..87915
location: region:87667-87915:1
so has part: feature:87667-87915:1:exon

WP_011798343.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87667-87915:1:exon

PNAP_RS23360
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23360
old locus tag: Pnap_4909
so part of: sequence
location: complement(88038..88877)
location: region:88038-88877:-1
so has part: feature:88038-88877:-1:exon
subclass of: SO_0000010

position:88038:-1
position: 88038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88877:-1
position: 88877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88038-88877:-1:exon

PNAP_RS23360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23360
old locus tag: Pnap_4909
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011347054.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NYN domain-containing protein
translation: MNGAVAIGETRVAVLVDCDNVTPEILEYALRVIAQFGRVVLRRGYGNHTTLANKWQEALVRLAFTPCLQYQYASGKNTADIALALDALEAMFDNRADTFCLVTSDSDFAYLCRKLRERGATVCIVGEAKTPDALRNASDQFFEWVRPELTTALAVDPWEKAQAKCIAMKPEPAKLELPKPSIKRRPRFIVDAVTLLASDTSEGKIGMGLLGQYLKRTDPAFSPKLYGHSGLLDMVKTYDLLKSEQEVGGHWSVSLAPKNEPVDLQPGESSPTKRLTTIS
SIO_010081: PNAP_RS23360
subclass of: SO_0000673
so part of: PNAP_RS23360
location: complement(88038..88877)
location: region:88038-88877:-1
so has part: feature:88038-88877:-1:exon

WP_011798344.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88038-88877:-1:exon

PNAP_RS23365
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23365
old locus tag: Pnap_4910
so part of: sequence
location: 89447..91201
location: region:89447-91201:1
so has part: feature:89447-91201:1:exon
subclass of: SO_0000010

position:89447:1
position: 89447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91201:1
position: 91201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89447-91201:1:exon

PNAP_RS23365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23365
old locus tag: Pnap_4910
inference: COORDINATES: protein motif:HMM:NF014442.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO process: GO:0006306 - DNA methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N-6 DNA methylase
translation: MVIPESKIRFNSLVKSLDTIAKDSENGPQRLVEAVLHAWQLQSYPLLAKRVSRQLGELPLKDDVNKFSLWLSQQSFNDAAFWLASAYATWVGEKRRTEQALYFTPPKLADRVIDDLVQRGASLTTVHWHDPACGGAAFLVPTAQRMAQALAGLGLASGEVLKRIERQLSGNDLDKALLSLSRQFLLMALYPHIKAAQRFPDFDLRNEDGLLPPPSKYQAPDVVICNPPYRKLNAAETQRYASKFKDVIRSQPNIYGLFIREALNVVKPGGLIGLLTPTSFLSGASFSKLRSRIVDLSHILQIDMLSDRTSMFIAVEQETVISVLRALPTLTHEAMPTDIHILTPGGTYENVGKHRLCNNGAPWAIPRSTADSALLDCAERSTARLGDFGYSARIGHLVAFRDKRRRFPQKPMDDAPRCVVPILWAGDITKEGLDHGRVQKKNRTDYFIEVSSLGHTSVISLPSVVLQRLTSNDQHHRLIAAPVPRCWQTAHGGFVAENHVVVLQTQPGNRWTPALMAKVLNSAGINRLYRSISGASNVATSELLALPLPPPRELDEALSRTEDIDEAIRIAFGLATPVTLRKKA
SIO_010081: PNAP_RS23365
subclass of: SO_0000673
so part of: PNAP_RS23365
location: 89447..91201
location: region:89447-91201:1
so has part: feature:89447-91201:1:exon

WP_011798345.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:89447-91201:1:exon

PNAP_RS23370
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23370
old locus tag: Pnap_4911
so part of: sequence
location: 91204..94035
location: region:91204-94035:1
so has part: feature:91204-94035:1:exon
subclass of: SO_0000010

position:91204:1
position: 91204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94035:1
position: 94035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91204-94035:1:exon

PNAP_RS23370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23370
old locus tag: Pnap_4911
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSYPLNRMQNQVALEKERLMQTQAVLLKKKENIARLLRIGAKPSSGAPGELPAKARAEKPSPGLSAVLPQESPGEPARVGVGFDLYRDIDNAPITVSKTVEQLAGHLLQIPADKVEVALLWPGTLRSLACLHAVSTISRWHKGDKRGIRTLIYPARANVFQDLNHAQIDRLALAKLYAELYEPPREVNPKVLVPCREKDTFFTSLRSVRCGAGIALQPTIGEILPHYYSDQEFKGWASCAGDLLKNLKTRLGDLHHTRALNMDAIPALSAPDYAPDALFALGWRSGAEDLEKALRSLKKLGSPHAILVDVTRAARKNNPKWLRSTVRFLQVVADVWPKQRPGICIVADEPHLRNQLVQEMARLGAKNGGATLPAGSTGMALHGFPCATTKDGFLPAGAAEALTPQARDIQVAFTDTEAAKLIGQVDRLKKATSNPGSQELLGKVSRYLSQLSALPSSTRVLSEWLNQTGMPMAVREQYAWPSYRSKLRVLLQDPGYADKTRLEGVIKKCDAMWLAYEKGTPFARQLANLLDKHTGGTERCCVVFTRPTAKRLAERYFETYDGYPQGAGFEVLKDRVRMVVSGSPSAELGLRENETVVFAGLDENSLRSLMLEDGISARTHLLLTTRNAAYLKATLAVIDAMPAFKDLGPRVTGLLKQLPEFPEPSDRQFLAREDFVLPAFSFEQALATQSQDEESKDPDAWELVLENGRSVRRSPGAKVYIFDPLYGYTQTRGFRGVGVQDLQAGQRLFVMSGELREATEAALRDAGVDVSHDKQFEASLHHYHNRVLRGIAETLKKATLLEQARELRERLIAAPDAPQGFPAEGSIRHWLDVAGHMSANFQEQTSQAPRQAAHFSAFAKVIGFSALETVYFWKAVIQPLRGARRADGRRVSDAYSDMLMEPESVVVHKKMKPEVVSYLFSRAEENVYSIEAIKKPHSRELNA
SIO_010081: PNAP_RS23370
subclass of: SO_0000673
so part of: PNAP_RS23370
location: 91204..94035
location: region:91204-94035:1
so has part: feature:91204-94035:1:exon

WP_011798346.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91204-94035:1:exon

PNAP_RS23375
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23375
old locus tag: Pnap_4912
so part of: sequence
location: 94028..98260
location: region:94028-98260:1
so has part: feature:94028-98260:1:exon
subclass of: SO_0000010

position:94028:1
position: 94028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98260:1
position: 98260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94028-98260:1:exon

PNAP_RS23375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23375
old locus tag: Pnap_4912
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008111680.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase
translation: MPDLLMRADPLTISTALKEAVVDALVNLTFQRISGHGPEGSILFGARPRALLSSAFLLPVPAGAAGGDEVTQPIQICAHGLDFQVSTSRQGPVVVQPRLQVYVRVLPSVEDMARPDCVLRFRLNDVTRRDLQAKVSAALKAKWAEMMGTYKRRVDHPGWKTAEDEIRTRIHADLGLPRDLKTLFSEEPEDASDEEGASANVAEDGAAEEGFTVPGASAPELTLKDSQFQPMDIPHKWLRLPLPQDALPTFILDPQQDKSGLREACELAASALNGAIGTALLAWATSPEGLAWGFRTGIKVYPSEYKGWAAFLEKVRASGKPVALPAIKLGWDARVSPDWLDPARASVHVSLENRSEPPKKNRDETDDAVFQVDVTATLPRALHRPLKLGRVEASYRYNKYLDYPATGFNGGVEVLHSENPQVLTLRTTWSPRYTQPRIVPKSYTAVNPHIRALSEPQGLAGLLLLGEELDAWLATLPSKVHLQEGLSADDVPGLLREQGGFAADTESWKKEIQAIHAGLRILKESKAEWDKTKKRGPQSSDKAAVYEAWLAMNETMAELMKEKLPDDSGAWRLFQIAFIVANVPAIASRMKCFGHEFDRERDDTVTLLYFATGGGKSEAFFGLLVLNLFFDRLRGKKTGVTAMLRYPLRLLTIQQAQRCARVLAKAELVRRKHGHGGDAFALGFWVGSGGSPNHPGAPGMDLIPPVEKEPPTAKGEAALLQTDVNYELQKAAWNKIPNCPFCKADTALRLFPALGGTLAHVCTSASCASNIGGWQPLPFYICDSDIYDLAPSVLLGTVDKLALIGQSAKTLRRIYGMLGAAPWRHKATGRLRVPQQPKEFAGGPAAHGCEGLFPAYPDGIKLFHDPFPSLLIQDEAHLLDESLGTFAGLFESALDAILAEMSKPLHALVTFEPDGQTRRRAKVIAASATVSEPQRQMEHLYQRPVPAMQFPFPGQSLYESFYAGPKAPSPQDTGRAAFATRDIEKWASWSRVYVAFMTNGRPHTATTVSVLSNFHTLISEFLMGMASGDTPRIEALRARLTAGVSEGPLCAMYVAQLEAATDSELATLIDLHRIALTYVTNKKGGDQIMAAEFEETRKRHADRGLAMGDLKTKLISGSVSQGDIQHTIEDAQRRPAPGHPMGELGDVLRSVIATSSISHGVDVDEFNAMFFAGMPSDIAEYIQASSRVGRTHVGFIVLIPTPQRRRDRYIVEVFDSFHRFLERMVQPAAIDRWAGKAIERVLPSFIQTYLTGVRYMSDITWAEPEDKENVASLDWIPSIIRELKQEASKKKLVDGLCRFIERAIGLNNGDFAPGGKEHYSALVRDKVYDLLNGWASNDLQAEQSLFEYFREQTSVMNRPMTSLRDVDEMANIHFGGKDLNGRRLETELARKVMIFIRHGVAQSDVRGEGQ
SIO_010081: PNAP_RS23375
subclass of: SO_0000673
so part of: PNAP_RS23375
location: 94028..98260
location: region:94028-98260:1
so has part: feature:94028-98260:1:exon

WP_011798347.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94028-98260:1:exon

PNAP_RS23380
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23380
old locus tag: Pnap_4913
so part of: sequence
location: 98257..100521
location: region:98257-100521:1
so has part: feature:98257-100521:1:exon
subclass of: SO_0000010

position:98257:1
position: 98257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100521:1
position: 100521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98257-100521:1:exon

PNAP_RS23380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23380
old locus tag: Pnap_4913
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008111678.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSYSHKAKTAAGAEIQPPKAPPMTRSRSQVATAYAPGALFTFEGGLGACLAIPDQQERQTPADISKETAEQIHLRVREVWQNWFNRASTGGTDKHAALPGQCLDLMLLREGRYHAPSPSRFELVDPLQMGYVPAPLAFVCNVCQRFRSFTSVKAAADGLSGLAGEPCGATGPEHTGKCRWRQLDVVFIHWSGAWEPPSPGRWEWRASTEKRPGQLHEPMGRCWCGSEKFYLRDNSPRIGQWFFQCDAGHKDGDSWIQNDPVTTELLGDQGTARPPRWRRMEPISYRASAVFYPHTEQFVVFSKEQSSLLRLLQEGKHQELAAFVAERYGMGAVVPTAQSMLETLRAGGEQHRHKVQDYESIALMLSNPLMQANPDMARMLEKSLEDKAQDWRNTPGLIPVDREIPPLLLSQAQLRAEFGSRYDPFTLAVEHEALNRSKLSATAGLEGRAPFVRFNHLDKDLSPSTEALRTEQQQATTRLMGLLGMAEIGLIREFDLCRFTHGFTRMSSEPLIEKNDSGQAVHYPVRLNLFPTLGNGKRPVYVVTQANEAIYVRLRPELVYAWLKGVGVGDLPEWDPAGPLKFGAHLLQLARPFGKYFSELHPGPASTYRYVYTLLHTYAHVFMKSISEYSGLDLGSLSEYLFPADMAFVVYRNGTTMDLGNLSALWRNFNNIFLEHLLASKTLMCGSGSLCDTNPHKPGACPDCVMVPETSCLASNQLLSRAVLRGGPAPREDKDHQGQEIPGFLDMAHAHAAA
SIO_010081: PNAP_RS23380
subclass of: SO_0000673
so part of: PNAP_RS23380
location: 98257..100521
location: region:98257-100521:1
so has part: feature:98257-100521:1:exon

WP_011798348.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:98257-100521:1:exon

PNAP_RS23385
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23385
old locus tag: Pnap_4914
so part of: sequence
location: 100508..101356
location: region:100508-101356:1
so has part: feature:100508-101356:1:exon
subclass of: SO_0000010

position:100508:1
position: 100508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101356:1
position: 101356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100508-101356:1:exon

PNAP_RS23385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23385
old locus tag: Pnap_4914
inference: COORDINATES: protein motif:HMM:NF024491.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phospholipase D-like domain-containing protein
translation: MPQLDSTFAVLAKHSELLEPVLGLASKGLLRGPTSLGSLAGRAGISLAKLPELARALRAGAGAAVFSEASMGQWHLSCSPAVAADLALMLRGLNVYRQRVHEDRDRVTAVISKPAEPSQFTGTLEKTLEGFRGLETTAEALIDLAHRAQRRFTVMSPFVDSSGLDRLVVLFGETGPAVRRELITRRPFDVAVAPRLPELQALGVQVYDFRIAQERAGRNETFHAKAVRVDEDECYVGSSNMNEWSFHYSLELGFNVKGRAANRISQVLDAVIEVSAVVHLAT
SIO_010081: PNAP_RS23385
subclass of: SO_0000673
so part of: PNAP_RS23385
location: 100508..101356
location: region:100508-101356:1
so has part: feature:100508-101356:1:exon

WP_011798349.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100508-101356:1:exon

PNAP_RS23390
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23390
old locus tag: Pnap_4915
so part of: sequence
location: 101403..101609
location: region:101403-101609:1
so has part: feature:101403-101609:1:exon
subclass of: SO_0000010

position:101403:1
position: 101403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101609:1
position: 101609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101403-101609:1:exon

PNAP_RS23390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23390
old locus tag: Pnap_4915
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MARPKSKTEATSLKMTPEVRDLWERCAAAEHRSLTNMFEVMVREHAKKLKLKPAPVPAVPPTQPTDNK
SIO_010081: PNAP_RS23390
subclass of: SO_0000673
so part of: PNAP_RS23390
location: 101403..101609
location: region:101403-101609:1
so has part: feature:101403-101609:1:exon

WP_011798350.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:101403-101609:1:exon

PNAP_RS23395
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23395
old locus tag: Pnap_4916
so part of: sequence
location: 101619..103442
location: region:101619-103442:1
so has part: feature:101619-103442:1:exon
subclass of: SO_0000010

position:101619:1
position: 101619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103442:1
position: 103442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101619-103442:1:exon

PNAP_RS23395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23395
old locus tag: Pnap_4916
EC number: 2.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011791644.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent DNA methyltransferase
translation: MAQNFSELANFVWSVADLLRGDYKAADYGKVILPLTLLRRLDCVLEGTKEQVLEEHAKHKGEGDAPTSLDRILKRKSKQAFYNTSPFTLQTLLDDQKHIRQNLTAYIGEFSADARDVFERFKFLERLVELDDKDLLFLLMQKFASIDLHPDAVPNETMGLVFEELIRKFAEASNETAGEHFTPREVIQLIVHCLFSGDSEALSKPGVVRSMYDPTAGTGGILSVGEAVARSINKSAKMVLFGQELNDESYAICKADMLIKGQDPKNIVRGNTLSADGFPDEKFDYGAANPPFGVDWKKVLDPIKTEHETKGFAGRFGPGLPRVSDGSLLFLMHLISKMRPAAEGGGRIGIVLNGSPLFTGDAGSGESEIRRWLLENDMLEAIIALPNDIFFNTGIATYIFILDNDKKADRKGKVQLIDATRMYTKMKKSLGNKRVRITDEQISEIVGVYSAGAKDANFELEFKEPVKSTGGNPAEAPALRIVSKVFENKFFGYRKVTVDRPLAEGKTGKFKKGEKAFDKDLRDTESVPLTESIDAYFKREVLPHVPDAWVNKDVKDEKDGLPGKVGYEINFNRYFYVYKAPRKPAVIAEEILEMEKRFVELMKGVVA
SIO_010081: PNAP_RS23395
subclass of: SO_0000673
so part of: PNAP_RS23395
location: 101619..103442
location: region:101619-103442:1
so has part: feature:101619-103442:1:exon

WP_011798351.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:101619-103442:1:exon

PNAP_RS23405
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23405
old locus tag: Pnap_4917
so part of: sequence
location: 103472..104677
location: region:103472-104677:1
so has part: feature:103472-104677:1:exon
subclass of: SO_0000010

position:103472:1
position: 103472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104677:1
position: 104677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103472-104677:1:exon

PNAP_RS23405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23405
old locus tag: Pnap_4917
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: restriction endonuclease subunit S
translation: MTDLNPPVRADLLAALDTELSFLPMDSIGENGSLNLARTRPIAEVRNGYSYFEDGDVAFAKVTPCFENGKGALMQGLEKGAGFGTTEITVLRPKTGTNARYLRYIVQSEMFRQLGVGAMTGAGGLKRVPDDFTRDFKTVWPEAVAQERIANFLDDKTARIDALIAEKERLLALLNEHRLSVSAQVLAEASSGLRAKLGFCVDLLPGYAFPSDEFSRDAGNIPLLRGINVAPASIRWDETVYWSREYDSSLERFRLQQGDVVLGMDRPWISSGARVAMIDEASAGSFLLQRVCRLRGGVRLTQRFLFFALLSDEFRQSVEVDLTGVSVPHLSPEQILRFKVPVLTVDEQRVRCDVADRQLLKIEQLEAHTLQMLDRLREYRSSLISAAVTGQLDFDALEVAA
SIO_010081: PNAP_RS23405
subclass of: SO_0000673
so part of: PNAP_RS23405
location: 103472..104677
location: region:103472-104677:1
so has part: feature:103472-104677:1:exon

WP_157040528.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103472-104677:1:exon

PNAP_RS23410
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23410
old locus tag: Pnap_4918
so part of: sequence
location: complement(104824..106113)
location: region:104824-106113:-1
so has part: feature:104824-106113:-1:exon
subclass of: SO_0000010

position:104824:-1
position: 104824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106113:-1
position: 106113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104824-106113:-1:exon

PNAP_RS23410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23410
old locus tag: Pnap_4918
inference: COORDINATES: protein motif:HMM:NF019421.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system HipA family toxin
translation: MISNKTSPLNSPERENEPLWVWVYLPGQAEPVLCGRYDRTRNEVGIVGAFTYGRSYLEREDGVPLDPIILPLQTKRYETAALDGWFSVLLDAGPDAWGRRLIDRAIGVQDERGYLLHARGQTVGALAFSDSRETPPARAHSTTPQTLEYTLALHARVEAGESLSPEESVYLLGEAGSGGVRPKLTLEDGGALWLVKGISVKDSVELAPVPCVEAALLTLADACDITVPRHSVRQLDGKPVLLVERFDRSPLSGGGFGRWRYASARSIFWSNPEVAKYSFQGSYTNLARQLRVWERSPTRSVRELYRRVVFNALVGNTDDHDKNHGVVAGADREFVLAPAFDLTISEKLSKRNYLALSFGTKGGEISLENLLSDCAVFGYTPAQAREIIDEQWKTLSSRLLETIVANGSAEAAAARTIARIPGYSILDLG
SIO_010081: PNAP_RS23410
subclass of: SO_0000673
so part of: PNAP_RS23410
location: complement(104824..106113)
location: region:104824-106113:-1
so has part: feature:104824-106113:-1:exon

WP_011798353.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:104824-106113:-1:exon

PNAP_RS23415
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23415
so part of: sequence
location: complement(106103..106441)
location: region:106103-106441:-1
so has part: feature:106103-106441:-1:exon
subclass of: SO_0000010

position:106103:-1
position: 106103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106441:-1
position: 106441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106103-106441:-1:exon

PNAP_RS23415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23415
inference: COORDINATES: protein motif:HMM:NF024949.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MTRAANLSLLPIELTNQVTSLGRRIRSARQARRLRLEDIADKTGLSRKTVEAVERGELSTSLGAYVAVLGCMSLGQELDLIADPGLDRDGLALRFSVAEKRVRLSQKVDNDF
SIO_010081: PNAP_RS23415
subclass of: SO_0000673
so part of: PNAP_RS23415
location: complement(106103..106441)
location: region:106103-106441:-1
so has part: feature:106103-106441:-1:exon

WP_041377752.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106103-106441:-1:exon

PNAP_RS23420
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23420
old locus tag: Pnap_4920
so part of: sequence
location: complement(107029..108429)
location: region:107029-108429:-1
so has part: feature:107029-108429:-1:exon
subclass of: SO_0000010

position:107029:-1
position: 107029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108429:-1
position: 108429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107029-108429:-1:exon

PNAP_RS23420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23420
old locus tag: Pnap_4920
inference: COORDINATES: protein motif:HMM:NF039631.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6035 family protein
translation: MQITEFNTPEGLAVTDPEIPVVLEASTGRELPVREVIGDDLAHLMQLRMAVATSNQEDRALYLCPECFVPLALLSRKERRRFWFKHTLEDGRCSAVTRGELTQEEINARKYNGAKESFLHRQMKQWLVESLYANGRFADIASEQRWTGSVTGAWRKPDVSAQLENLKFAFEVQLSTTFLDVIAERRRFYTLEGGLLFWVFAHFEDDGRRLTQDDVFYNNNQNAFIVSQATRDASRAAGKFLLDCVWSEPGHGNAEPVLRRQRVSFDELTLDQEKQQVYFFDYAGAQARRVADEAAERASWPTRFEAWWLQVAGSYSSLYDQEHEVHQFPQCVPKDWNDWGLISLTPLRFYGKDMRLPVAMLNCFYSAKHGRPVGLNRKHFIEVAHYLAESYPRYLMWFRRALAVYDRAPLLKQQDKTGNWAKRVKAYLPDMHADPEKYTADQKHQRLFEYLFPELLPLPASPNEAL
SIO_010081: PNAP_RS23420
subclass of: SO_0000673
so part of: PNAP_RS23420
location: complement(107029..108429)
location: region:107029-108429:-1
so has part: feature:107029-108429:-1:exon

WP_011798355.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107029-108429:-1:exon

PNAP_RS23425
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23425
old locus tag: Pnap_4921
so part of: sequence
location: 108871..110001
location: region:108871-110001:1
so has part: feature:108871-110001:1:exon
subclass of: SO_0000010

position:108871:1
position: 108871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110001:1
position: 110001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108871-110001:1:exon

PNAP_RS23425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23425
old locus tag: Pnap_4921
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018578482.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTKPTLAPDPWHFPRPELAQKYLLSFGLGLSSARGLFAKRRMGKSEFLEQDLIPAAQAEGYLTAYLNMWDARTHPTPSLVAALSRAVEPKGLSKLVQRLNAPLKKVKASGKLPGLVEGSLEAELVDGPAIAGPLLSELLRGFDKPGKRLLLVLDEAQVLADPLHTELAHSLRAGLDSRKQNIKVVFAGSSEPTLRRMFGRSTEPFYNWAPLEPFELLDAEFVKAMVAKVNNLSRFPLAEKDAMAAFETLKKTPEFFRRYLNRYLTYAELGPQAALEDTQAHVFSGANFKDLWNKLLPADREVLKLLVKGVTDLYSEANRLRLGLSLGLDKAVSKNTPQNSLRRLQDEGLVARFDHGEYQVQDDAMAEWLRNLELDI
SIO_010081: PNAP_RS23425
subclass of: SO_0000673
so part of: PNAP_RS23425
location: 108871..110001
location: region:108871-110001:1
so has part: feature:108871-110001:1:exon

WP_011798356.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108871-110001:1:exon

PNAP_RS25315
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS25315
old locus tag: Pnap_4922
so part of: sequence
location: 110188..110793
location: region:110188-110793:1
so has part: feature:110188-110793:1:exon
subclass of: SO_0000010

position:110188:1
position: 110188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110793:1
position: 110793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110188-110793:1:exon

PNAP_RS25315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS25315
old locus tag: Pnap_4922
inference: COORDINATES: protein motif:HMM:NF022607.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2939 domain-containing protein
translation: MFMTTKTIKIAVIAAAVAVAGYWYWSPFLAIRQMQSAAQEKDAEAFNERVDYPKLRESLKGQLSAVMGEQMAKTQDAGNPFAALGSMLGLAMVDRFVDAMVRPETVMRAMQDGQMSPAAAKTSDAPAPTTSNPDSPAPAAAREDNKPKWTYDRKGVDRLIAYATDPQKPGAPNSEKLGVVFERSGFANWKLTEVRLPVLGR
SIO_010081: PNAP_RS25315
subclass of: SO_0000673
so part of: PNAP_RS25315
location: 110188..110793
location: region:110188-110793:1
so has part: feature:110188-110793:1:exon

WP_049763838.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110188-110793:1:exon

PNAP_RS23435
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23435
old locus tag: Pnap_4923
so part of: sequence
location: 110826..111443
location: region:110826-111443:1
so has part: feature:110826-111443:1:exon
subclass of: SO_0000010

position:110826:1
position: 110826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111443:1
position: 111443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110826-111443:1:exon

PNAP_RS23435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23435
old locus tag: Pnap_4923
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLPNEADIVIAKALNEISPKLKTAFVIGPLQSKRGLDEFFESRVLWEDALDWPYDKDIVLWFLSKRANAAINRWLQNSKLSVLAGVSPLLTGSVLVSRERIDHIREHRDNQAVGTLAVVELLRQLFVEGAPTFCANKSTGDRKQGYDQQLVMFNSTYKSKNKEVSGQFPAAILSFSAEPVPHLKIETAYWMHSRKAETLRKGAL
SIO_010081: PNAP_RS23435
subclass of: SO_0000673
so part of: PNAP_RS23435
location: 110826..111443
location: region:110826-111443:1
so has part: feature:110826-111443:1:exon

WP_011798358.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110826-111443:1:exon

PNAP_RS23440
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23440
old locus tag: Pnap_4924
so part of: sequence
location: 111722..114829
location: region:111722-114829:1
so has part: feature:111722-114829:1:exon
subclass of: SO_0000010

position:111722:1
position: 111722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114829:1
position: 114829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111722-114829:1:exon

PNAP_RS23440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23440
old locus tag: Pnap_4924
inference: COORDINATES: protein motif:HMM:NF037510.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]
GO process: GO:0006304 - DNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I restriction endonuclease
translation: MTTIANVHTERVFENELCEHLAANGWSVRTHLQDAKSYSRELALFPEDLIAFVQETQPKEWAKFKQWHNGQSEAMFTKRVADQLNRHGTLHLLRHGFKDSGSNGTTKFFLCQFRPAHKKNMQLWEMYEKNRLTAIRQLHYSLHNEKSFDMVLFVNGLPVATTELKTDMTQSIKDAIDQYKKDRLPRDLKSKELEPLLQFKTRALVHFAVSTDEVFMATKLEGDKTYFLPFNLGRPDGFGGAGAGNPPATKEHGYPTWYLWKLVWSRDVWLDILGNFLHIEVKEAQDKAGKKVTKESLIFPRFHQLDAVLHLVRGAGDEGVGQVYLIQHSAGSGKSNTIAWTAHRLANLHSAQDDKVFDTVIVITDRRVLDRQLQETISQFEHKAGAVQKIDQNSEQLAKALNDGVPVIITTLQKFQFILQKVQGLKDKKFALIVDEAHSSQSGSAAQKLRRALTTDTKKVVTVELDGAPADVDVDVEIDPEDVTSEDIINQVMLSRQRPPNVSYFAFTATPKSKTLELFGRPGTDGLPVPFHVYSMRQAIEEGFILDVLKRYMSYKTFYKLGSTAAEKMVPQMKAKKTLGRFAVLHAYNIAQKIVVIVEHFREFIAPKLGGHAKAMVVTDSRLAAVRYKLAMDKYLKEMGYDKEMKALVAFSGEVQDPESGPDDFSERSMNAGIKGQEPSDAFKEEVYRVLLVANKYQTGFDQPLLQAMYVDKRLSGVMAVQTLSRLNRMAPGKEDPFVLDFVNKPEEILASFKPYFRTAEVEAVTDPNIVHELQVKLDKAKVYVPNEIEQYAKAFFDPKCKQASLMYILKPAKDRFYDLEDEDAEQFRKDLGTFLRLYDFLSQIIPYGDADLEKLYSFGKGLMPMVAARNSGSSILELDSDVQLTHYRIQKLGEQTLNLATGELVKLKPASDAGSGTTQTDEEKKLAEIVDKMNDLFSGELTEADLVGYVTTIKGKLLESETLAEQAVSNTEQQFGMGDFKDIMMDIIIDGQESHNKIAGQLLQDDRTFAIMQGMLAKMVFDGFKRAAAQAQAS
SIO_010081: PNAP_RS23440
subclass of: SO_0000673
so part of: PNAP_RS23440
location: 111722..114829
location: region:111722-114829:1
so has part: feature:111722-114829:1:exon

WP_011798359.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111722-114829:1:exon

PNAP_RS23445
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23445
old locus tag: Pnap_4925
so part of: sequence
location: 114891..116378
location: region:114891-116378:1
so has part: feature:114891-116378:1:exon
subclass of: SO_0000010

position:114891:1
position: 114891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116378:1
position: 116378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114891-116378:1:exon

PNAP_RS23445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23445
old locus tag: Pnap_4925
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013539120.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNDRALPLANEALQQMLPACELLDLGRQQRNLLLLRPLFQLELNKLRIGDEATGDKGLFQAVDTHYLVLSALDFMMEGTTVNMGSTQQEVLSHLSAVAQVMKPELTAQQATRVAEVVLDTLDNKAQSYREFIFDHFDAMQRKHRTLRFRLVAYQPDLEDIYRYKPTSEGYLVYLGMLDLAPEDSQELMEKMLDLLVKRGRFEAALEIARRARKLSLEYRQLIRDRLMQAYRAPGSVNWTKDMAGKLTAARGHVAGRQAEDQRMEEAVREALQSSDELKTRQDLSQLLKTLQSASLIRSNLVNDITVAPDKFLVSQRSLFRARRPSSLPDLEDRLFPQLISLPANVLVANADNCISGLYPASWPKVYDLNNVFALLLERRADEPVLDEDDGEITPFESQKDQFAPEVISQVEQWLKRQFATGSTFRIDQLLGMAEAQGMDSQLRRCMVLMLFRSYAQSETLFPGMKSDAAGRFQMDIAQGTNLEFSPLQENKADKP
SIO_010081: PNAP_RS23445
subclass of: SO_0000673
so part of: PNAP_RS23445
location: 114891..116378
location: region:114891-116378:1
so has part: feature:114891-116378:1:exon

WP_232290859.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114891-116378:1:exon

PNAP_RS23450
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23450
old locus tag: Pnap_4926
so part of: sequence
location: 116375..117106
location: region:116375-117106:1
so has part: feature:116375-117106:1:exon
subclass of: SO_0000010

position:116375:1
position: 116375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117106:1
position: 117106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116375-117106:1:exon

PNAP_RS23450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23450
old locus tag: Pnap_4926
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011614292.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTTLQASTRNAARLVYKALQTTLSPVNDLQYRELLDLYRADPKFAGAVQEIAEGLELIVLDFSERGLIVVPTSRESKFSVRMADIRTNLKADQKAGLLLAHIAITAVFYPTTDGLDDDNYIPPPANLAQFRDVLFALARRLKDAGGNMQDVPLELAPGWELICAMPTVLPASQRASANSLTGLIGLALTHMVSGGLVRIDRESSDEELITYTATHRLRVQLRELTLRRLFELAQTSSTTAGSA
SIO_010081: PNAP_RS23450
subclass of: SO_0000673
so part of: PNAP_RS23450
location: 116375..117106
location: region:116375-117106:1
so has part: feature:116375-117106:1:exon

WP_011798361.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:116375-117106:1:exon

PNAP_RS23455
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23455
old locus tag: Pnap_4927
so part of: sequence
location: 117108..121433
location: region:117108-121433:1
so has part: feature:117108-121433:1:exon
subclass of: SO_0000010

position:117108:1
position: 117108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121433:1
position: 121433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117108-121433:1:exon

PNAP_RS23455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23455
old locus tag: Pnap_4927
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQKITRIYVGNYGIDMAWYDGITFDLTDPDDGYPTDTIINLENGGGKTTLLSFIFSCFETSQERFLKHIQNKNHRFSQYFAKDGLPGIVLIEWLMPARVAGGAPYRLVTGQAVAVRTNAERDEVDRVFFSFEASQGLTFETVPAPKLCFAPVTNMNEFSRWMHESNKTSPDFFYTRTQSDWQKHLRDERLIDVEMLQLQVNFSAQEGGIDTGFLTFTSEPEFIRKFFDLTLDPERSAAVRLAVVNTCDKLSRRPHFQQCLTELTKLRDNLTHFDEAAGAFATTRASQGEAVRRGSGLALSLDTMNRDRTQLAADEAARATDQELLANKSGQMASSRADDVLVLTALQYLRRKEQAEAAKKQADDLLSNARNKLVHVRAAQARGELDALDAQLAQLESLSAVAQEQLEPWRDNAEKQGALLRRALYAGEQKLQKAAAGEASLEVAAHQNQIALSKDLATLTKEEQYLFQVQANLKAMENAYTATKAQLIREGQLEPEEESTVAAARYASTVTAKRAREQELIAQAQGFRALESASRAKSKNETAEAARLKAEIGPLQRFIADAEVEREQLSQLPILRQAAEAETADPDSAALVPALDRLIHGSESEVAQCEVHLAALRSSKAAIVETGVSGASRDVNEVVSRLRELGVKSAAPFNTYLARALPDADKARALVASNPARFLGVCVASAELDKARSVFSPSLQLVAPVMVSSTALESDPVEENRFVLPAADDAAFNYAAATEHLTHLDVRINTEEQRREVYAGRQRAALAAKQRLQAYGARFGGGAVSRAGIDAARLAAEGLAASERAQEAEGLASASQEKAEAARKEADECSKAADRAHSDGRAIERFARDHEAGRAACLARLDSLLVELAAKGDLRDRISTELGDSAGAEKAAYRRKLEHQTEAAHLGAERGALKHYSKSFAAEQHLAEHPQELAVLRVLYSDAEKTYDAEAETRLGIVHEKQDSARKDRASKGQAFTNAFPGVKASDISPYLNANFAVLLPATQQEVEETDNASRSADSKCAVAANEHSRYLKANKTNSAASAEMLALNDDALHEAIQTSTQDQIQAAATALAAKLEAGRCRDRARQARVDATQALNTTSALRASLSLPELLDAEPELLLEDIAAQANQVIADFQSKAKSVESARKKAYKAFEDLKSTASTPALQKVEPDIASQLLRNDFEAACADSTRLLEGIEDRIGTTQSSLDGMTSDFENCVGELSNLTNGAITLLNSATTNKKVPVGAPYVGGKAILKMRARFHELGQDVRRQHLRSYLDSLIGNNTVPAKGPELVAEALLRIHGKPLGMQMLKMVPDENLQYVAVDKIQNSGGEGVVMAMFLYMVINQLRSETQAKLKKAGGGPLILDNPFAKATTPTLWKAQRMLAQAMDVQLIFATALPDYNTVGEFGRFVRLRKAGKNTKTGRWHLEAVDFKLSPQAEALAA
SIO_010081: PNAP_RS23455
subclass of: SO_0000673
so part of: PNAP_RS23455
location: 117108..121433
location: region:117108-121433:1
so has part: feature:117108-121433:1:exon

WP_011798362.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:117108-121433:1:exon

PNAP_RS23460
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23460
old locus tag: Pnap_4928
so part of: sequence
location: 121430..122431
location: region:121430-122431:1
so has part: feature:121430-122431:1:exon
subclass of: SO_0000010

position:121430:1
position: 121430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122431:1
position: 122431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121430-122431:1:exon

PNAP_RS23460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23460
old locus tag: Pnap_4928
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013539123.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2220 family protein
translation: MSEAFLHLLRGSSRKRVPLLDVKRAFFEAHPETLTSPSRHEHLLSALRGLESSCAVQLPAPGSWERVGNPPLPNWVQLVRSEPAQPSPDYSQVPWVPELGFWPDLKPSALEAAKAVNDFLLRRRKSLLMVPLKERSLEIFGDEKRLDTLKSGNTLFGGRLPLSALGAFQVPPPIPYRKADAPGMPVLVVENHNSYWSFGEWNQAAKRYSAVVYGCGEAFRSTGAALGQVLREVQAVGAEYLGDLDPKGMRIPHEFNGASAITDPKVRPAVDWYRWLLQHGRKREKPEFATVDKAHALAWLGDGLGEEVAAVWIVGLWIPQEGLGYEQLAAFDS
SIO_010081: PNAP_RS23460
subclass of: SO_0000673
so part of: PNAP_RS23460
location: 121430..122431
location: region:121430-122431:1
so has part: feature:121430-122431:1:exon

WP_011798363.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:121430-122431:1:exon

PNAP_RS26425
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS26425
old locus tag: Pnap_4929
pseudo: true
so part of: sequence
location: complement(<122463..122712)
location: region:122463-122712:-1
so has part: feature:122463-122712:-1:exon
subclass of: SO_0000010

position:122463:-1
position: 122463
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:122712:-1
position: 122712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122463-122712:-1:exon

PNAP_RS26425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS26425
old locus tag: Pnap_4929
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798082.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5/IS1182 family transposase
SIO_010081: PNAP_RS26425
subclass of: SO_0000673
so part of: PNAP_RS26425
location: complement(<122463..122712)
location: region:122463-122712:-1
so has part: feature:122463-122712:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:122463-122712:-1:exon

PNAP_RS23470
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23470
old locus tag: Pnap_4930
so part of: sequence
location: complement(122911..123273)
location: region:122911-123273:-1
so has part: feature:122911-123273:-1:exon
subclass of: SO_0000010

position:122911:-1
position: 122911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123273:-1
position: 123273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122911-123273:-1:exon

PNAP_RS23470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23470
old locus tag: Pnap_4930
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTTLTTGVTTEQLVAAGGNFWTNNARAQRFYFNDLDSLFGLKCSYYKTGNVFSATLDGDVISNGLARRILSDVGTLKVYFDMADLSLHIKSGNFRMSENYDYESILTEALLAHANLTIA
SIO_010081: PNAP_RS23470
subclass of: SO_0000673
so part of: PNAP_RS23470
location: complement(122911..123273)
location: region:122911-123273:-1
so has part: feature:122911-123273:-1:exon

WP_011798364.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:122911-123273:-1:exon

PNAP_RS27410
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS27410
so part of: sequence
location: complement(123486..124082)
location: region:123486-124082:-1
so has part: feature:123486-124082:-1:exon
subclass of: SO_0000010

position:123486:-1
position: 123486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124082:-1
position: 124082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123486-124082:-1:exon

PNAP_RS27410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS27410
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTLSNQNFSEASNSAIYLYTRYCMTKKVGLEETNVRITSEQYSRLESAKEDDLEFMALLIFEEAVVKIQNFCKRILAACKASTRPGRAHRRAIDFLLGTLWQTFEEFSSIKEPTLAQMAEHLASLGDDYGSNGEIGGITVYLKGGREYLEFNMDGTWLTVDTLLDIIEDGGDVPIWWQHGWTKVRRNNEWIAREELY
SIO_010081: PNAP_RS27410
subclass of: SO_0000673
so part of: PNAP_RS27410
location: complement(123486..124082)
location: region:123486-124082:-1
so has part: feature:123486-124082:-1:exon

WP_157040529.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123486-124082:-1:exon

PNAP_RS27415
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS27415
old locus tag: Pnap_4931
so part of: sequence
location: 125058..125465
location: region:125058-125465:1
so has part: feature:125058-125465:1:exon
subclass of: SO_0000010

position:125058:1
position: 125058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125465:1
position: 125465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125058-125465:1:exon

PNAP_RS27415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS27415
old locus tag: Pnap_4931
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLERLVFFFQTCEKTTNFSASPAESKGQDAAGDYAGAAQRQHGGAFDSGQHGIETAGQRLMEGSPGTAALVQKVQLCLHAKTGQMYAALRAPCRWGARESDDARVLPELQVHISPKIKVQAVGGNGSFNKAAPCS
SIO_010081: PNAP_RS27415
subclass of: SO_0000673
so part of: PNAP_RS27415
location: 125058..125465
location: region:125058-125465:1
so has part: feature:125058-125465:1:exon

WP_157040530.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:125058-125465:1:exon

PNAP_RS23480
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23480
old locus tag: Pnap_4932
so part of: sequence
location: 126462..128318
location: region:126462-128318:1
so has part: feature:126462-128318:1:exon
subclass of: SO_0000010

position:126462:1
position: 126462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128318:1
position: 128318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126462-128318:1:exon

PNAP_RS23480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23480
old locus tag: Pnap_4932
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012354632.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific integrase
translation: MAQHNVVAIAPQRYTRADFAALRARLNKIPTATIVRLYFTEDALDTLHCPTPALLEKRIDALRDHLVQRLSLSAPTLSEHLANARKFHSWPKSLIDYLVNAAEADSAAPRLGDAVSVWFKPPVARALQAEGMHCLGEFRQYVLVRGPGWYRPVARIGQGKARALERWLAVQPTLGGLVMPAESVVGGERIELASASDIAPLERIGAITAKLSGAQGLNRSGRFCLVSARNDLEAIQAYLYRYRDRDKTHRAYQKELERFLLWCVIERRVALSSVLTDDCEAYKDFLAKIPGHWVGAKAARNSARWRPFLGALEPASQRYAVIVIRACFAWLVQVRYLGGNPWVTVADPCVAHKEIALDIDKALPEALWQALTGSGGLLDQACAGDAPAATLQAGPRAAGMALAQWRLARAAILLLGSSGLRREELAGATRSRLKRVPEETGAGLWELSILGKRNKWRTVWLPGSVVESVRAHWADRGHDFDTASIPGSSADLALLSPVALPPLAPARRKHAGAGGHEAPTGLSGAGFTPNGLYHLVKTALARLALSPHAALSQAERSVLSRAAPHALRHTFATRAAAGTMPLDVLQRLLGHASSQTTSIYVRAERTRSLDEAKKFFAR
SIO_010081: PNAP_RS23480
subclass of: SO_0000673
so part of: PNAP_RS23480
location: 126462..128318
location: region:126462-128318:1
so has part: feature:126462-128318:1:exon

WP_011798366.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:126462-128318:1:exon

PNAP_RS23485
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23485
old locus tag: Pnap_4933
so part of: sequence
location: 128539..129606
location: region:128539-129606:1
so has part: feature:128539-129606:1:exon
subclass of: SO_0000010

position:128539:1
position: 128539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129606:1
position: 129606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128539-129606:1:exon

PNAP_RS23485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23485
old locus tag: Pnap_4933
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019576709.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MSRVIEFKTSVATALSGLDISAKKMHELVGREKPAGQHHMKYTPADMRAIRYRSVGLEPPETSLMPKVETKIPPVIVTRMTKGGVGKTSISVNVAAALGMMGYRVLMIDADPQATASNLLGIETSSYGNTIAHIGQFLRRASNTPDSDLSAAIIQIYEGGFLDLIPSDITLAETDASLVAVMSSHTRAELFLARNVDFLSQNYDVIIVDTAPGTTPIGLAFSFAARASGKVLTVVEPEGSCLRALDSLASNLAEIKAVTGAQIAMEVIINKYHPSLKHVRESMGFLYSKYSSMLNDSIVPQFSGFARQLNPASKDAGPLVEFESVSVGATAIFDVAKSLVQSFRITQPGLTIGDK
SIO_010081: PNAP_RS23485
subclass of: SO_0000673
so part of: PNAP_RS23485
location: 128539..129606
location: region:128539-129606:1
so has part: feature:128539-129606:1:exon

WP_011798367.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:128539-129606:1:exon

PNAP_RS23490
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23490
old locus tag: Pnap_4934
so part of: sequence
location: 129606..130601
location: region:129606-130601:1
so has part: feature:129606-130601:1:exon
subclass of: SO_0000010

position:130601:1
position: 130601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129606-130601:1:exon

PNAP_RS23490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23490
old locus tag: Pnap_4934
inference: COORDINATES: protein motif:HMM:NF014273.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB/RepB/Spo0J family partition protein
translation: MAKLPPKLSGLVSIGAVVASTPVHELPDMPILDAFSETSEPVAILAPSVVPTAFNSGRNLQSINIHLIDPNPLAPREVYTPQMILSRADDLRVQGQHDPIHVIPNPDASGRFIICDGWTRVLACREHKVFDSLLAEIHNELSLEESAWFGYEQNECRAMHCDLDRAMFYEKLIAAGEPAVEIARRAKLSKTMMSFYRAYAKLPEDVMEIIRQNPGKFGANAAYQLHKLHEKCGIRKAVALAGKYAVEDQTVRWLTNQAQALLSPTASKSIAPSKQIRYSNGYYKQRGDIFEVSIAVPDDKRVAFSIALEKLLDTVAEVLPAESDTAESSAQ
SIO_010081: PNAP_RS23490
subclass of: SO_0000673
so part of: PNAP_RS23490
location: 129606..130601
location: region:129606-130601:1
so has part: feature:129606-130601:1:exon

WP_011798368.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:129606-130601:1:exon

PNAP_RS28055
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS28055
so part of: sequence
location: 130725..130985
location: region:130725-130985:1
so has part: feature:130725-130985:1:exon
subclass of: SO_0000010

position:130725:1
position: 130725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130985:1
position: 130985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130725-130985:1:exon

PNAP_RS28055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS28055
inference: COORDINATES: protein motif:HMM:NF024736.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MDKSKLSDGEWVHLIGKLKKTPGIRVGCEATCRRFVEAVLWMLRSGAQWRLLPDRLGHLAQRVQAFFQLEPVWRVGADACPCISQG
SIO_010081: PNAP_RS28055
subclass of: SO_0000673
so part of: PNAP_RS28055
location: 130725..130985
location: region:130725-130985:1
so has part: feature:130725-130985:1:exon

WP_232290860.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:130725-130985:1:exon

PNAP_RS28060
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS28060
so part of: sequence
location: 130909..131244
location: region:130909-131244:1
so has part: feature:130909-131244:1:exon
subclass of: SO_0000010

position:130909:1
position: 130909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131244:1
position: 131244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130909-131244:1:exon

PNAP_RS28060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS28060
inference: COORDINATES: protein motif:HMM:NF033580.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MFKRFSSWSRFGVWEQMLAHVSAKADLENVCIDSTVVRAHACAAGAAGSHAGAQALGRSRGGFGCKIHALSDALGLPVRFILTGGQAADITQATPLMQAISTGALLADKGY
SIO_010081: PNAP_RS28060
subclass of: SO_0000673
so part of: PNAP_RS28060
location: 130909..131244
location: region:130909-131244:1
so has part: feature:130909-131244:1:exon

WP_232290861.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:130909-131244:1:exon

PNAP_RS28065
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS28065
so part of: sequence
location: 131255..131482
location: region:131255-131482:1
so has part: feature:131255-131482:1:exon
subclass of: SO_0000010

position:131255:1
position: 131255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131482:1
position: 131482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131255-131482:1:exon

PNAP_RS28065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS28065
inference: COORDINATES: protein motif:HMM:NF024975.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MLDWLGQRGIAAVIPPKANRKVQRSCDWYMYKERHLIECMFGKLKYFRRIATRYEKKASHFMEMLTFAAVLLWLR
SIO_010081: PNAP_RS28065
subclass of: SO_0000673
so part of: PNAP_RS28065
location: 131255..131482
location: region:131255-131482:1
so has part: feature:131255-131482:1:exon

WP_232290862.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:131255-131482:1:exon

PNAP_RS23505
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23505
old locus tag: Pnap_4936
so part of: sequence
location: 132169..132564
location: region:132169-132564:1
so has part: feature:132169-132564:1:exon
subclass of: SO_0000010

position:132169:1
position: 132169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132564:1
position: 132564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132169-132564:1:exon

PNAP_RS23505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23505
old locus tag: Pnap_4936
inference: COORDINATES: protein motif:HMM:NF024999.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MTAEFVRRLPYTRFVALMPRCAVVLAAWFQTLKCAYTGLSITDVTPLAVCYNLRISRHRVIKGSAQHGKYSTGWFYGFKLHVVINHQGKLLAIKVFPGTVDDRKGLLDSAYLFQAQSPSVQIVKVREIEPA
SIO_010081: PNAP_RS23505
subclass of: SO_0000673
so part of: PNAP_RS23505
location: 132169..132564
location: region:132169-132564:1
so has part: feature:132169-132564:1:exon

WP_011798369.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:132169-132564:1:exon

PNAP_RS23510
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23510
so part of: sequence
location: complement(132677..132943)
location: region:132677-132943:-1
so has part: feature:132677-132943:-1:exon
subclass of: SO_0000010

position:132677:-1
position: 132677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132943:-1
position: 132943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132677-132943:-1:exon

PNAP_RS23510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23510
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPEAKDDYVVKTGRKKICNPSMQTRVFTTVELFTKFGMLGSFDNWMVISAAPMANVVADGGVFSQFSCQVTLDTVVVIRVDDATVLAM
SIO_010081: PNAP_RS23510
subclass of: SO_0000673
so part of: PNAP_RS23510
location: complement(132677..132943)
location: region:132677-132943:-1
so has part: feature:132677-132943:-1:exon

WP_041377726.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:132677-132943:-1:exon

PNAP_RS23515
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23515
old locus tag: Pnap_4937
so part of: sequence
location: 133149..133856
location: region:133149-133856:1
so has part: feature:133149-133856:1:exon
subclass of: SO_0000010

position:133149:1
position: 133149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133856:1
position: 133856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133149-133856:1:exon

PNAP_RS23515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23515
old locus tag: Pnap_4937
inference: COORDINATES: protein motif:HMM:NF033580.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MRNGSVSSRSCPLARAAPAGRLGKFFDALLWMARTGAAWRDLPEQLGKWNVVYQSYAYWCGKGHFERFFQGVQQPDLEEVMVDSTCCRAHQSSACARKTSRPQVIGITRGGLNTKIHAVCDALGNPLRFVLTPGQRHDSKPVPELLEGLQAKALLADKAYDSDKMVQAAQKQGMEVLIACRVNRKKNQRVQHTHRYKARHLMENLFQRMKVFRRVATRYDKLGVTFLGFVHIAAP
SIO_010081: PNAP_RS23515
subclass of: SO_0000673
so part of: PNAP_RS23515
location: 133149..133856
location: region:133149-133856:1
so has part: feature:133149-133856:1:exon

WP_011798370.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133149-133856:1:exon

PNAP_RS23520
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23520
old locus tag: Pnap_4938
so part of: sequence
location: 134639..136054
location: region:134639-136054:1
so has part: feature:134639-136054:1:exon
subclass of: SO_0000010

position:134639:1
position: 134639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136054:1
position: 136054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134639-136054:1:exon

PNAP_RS23520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23520
old locus tag: Pnap_4938
inference: COORDINATES: protein motif:HMM:NF013235.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MTNARQSDAHQLALALFEDFAPLSKSIADAPAEIGFSRNNIFVEIEDLSLATRRALDAAYFIVSQKEAVCKTYEVDLNFFQWLMAYSSSNRKHFRALMVEAQKAVIQVQDTDPDDDQDDRWGAVQMLGAVKIYKGKIVFEVHDSLQRAIKNPVSSHFLSLRLIFSSLHAKILHDRLLPVVTEGGTPWIPIQELRRWLSCTTKTYDEFKYIKRDVLEPAIKQINSLSSIAVSLDTRNLPGTKKIGEVRFRVKADQHGTASMAPMLVLKELYDILNDEIGLSTAQFSEIISNREAWTDARIRQALEYTRFSFRRGKVNRSVSGFFMRALKDGYNVGSADLALLEGGANPSGVEPCAAAEVGAVKNTFEVHLARQEAAEARRVEDVTQRGMDLFQALDTQGQQQALQAFSQTSPAKVIATRTKTEVQALGTLVEDNLWMRRALGSFMLEGGEKPSVKRRAARPATDGTAPYLAR
SIO_010081: PNAP_RS23520
subclass of: SO_0000673
so part of: PNAP_RS23520
location: 134639..136054
location: region:134639-136054:1
so has part: feature:134639-136054:1:exon

WP_011798371.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134639-136054:1:exon

PNAP_RS23525
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23525
old locus tag: Pnap_4939
so part of: sequence
location: 136855..137772
location: region:136855-137772:1
so has part: feature:136855-137772:1:exon
subclass of: SO_0000010

position:136855:1
position: 136855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137772:1
position: 137772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136855-137772:1:exon

PNAP_RS23525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23525
old locus tag: Pnap_4939
inference: COORDINATES: protein motif:HMM:NF012798.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MTVENTLVLFAYDAQDWVTQPGMAFDAFLAGYRFEGRHLRASSFVVYRGMFMRLHDWLGQQDKNLFSLNARLINEFLDSRTLSAESRHRYLLLYTTLLAHLADFKAAQANPAHALLLEQEAPERGNPEWLTAAEAQAFLTTAAPGSGWKQLRNRALAHTVLGAALHSSEVLSLKLSDLNRKRDVVETIWIRPNGPRPSRVVPVQRFALTAIEAWLAERSVRGLPGALVFPASPAGGPISPATLFRQVRATLVKAGISRRYEGPTLLRNTCGALWLSTHPAPQVMQWMGHATLRTTELLLGKSENR
SIO_010081: PNAP_RS23525
subclass of: SO_0000673
so part of: PNAP_RS23525
location: 136855..137772
location: region:136855-137772:1
so has part: feature:136855-137772:1:exon

WP_011798372.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:136855-137772:1:exon

PNAP_RS23530
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23530
old locus tag: Pnap_4940
so part of: sequence
location: 137957..139345
location: region:137957-139345:1
so has part: feature:137957-139345:1:exon
subclass of: SO_0000010

position:137957:1
position: 137957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139345:1
position: 139345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137957-139345:1:exon

PNAP_RS23530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23530
old locus tag: Pnap_4940
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011236894.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fic family protein
translation: MPYNDRLTPDTLLQALTSLAAQRHELVVSSTQLVEATGSSLPAVKRMLARLVAEKRVETTGKARATRYRLLVAGAQRAVVEKATAQAPVAKSPGRVGPAWHAASLELRQRLSLPLGARTPVTYRREFVDEYKPNETFLLPQELAEELSRLGRLPEQMPAGTYVRKVLEQLLIDLSWSSSHLEGNRYTLLDTEELFKSGAAATDSDAVMLLNHKAAIEFLVDAVPTQGLTPGLIRNLHAVLMQDLLMDVAALGAIREKVVNISGTVYIPAQVPAVLTEMFERIISTTQYIKNPVEAAFFLWVNLAYLQPFEDGNKRVSRLAANIPLMLYNQAPLSFLDVNREDYALAMMGIYEFCDLSMAVDLFAWTYRRSHAKYKVVLESLGSPDPFRIKYREALNEAVGQVVRRRELIEVALAGLGLPKEDASKFQQLLVHELNALAVFNCARYRLGLKETQAWIDEGRPR
SIO_010081: PNAP_RS23530
subclass of: SO_0000673
so part of: PNAP_RS23530
location: 137957..139345
location: region:137957-139345:1
so has part: feature:137957-139345:1:exon

WP_011798373.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:137957-139345:1:exon

PNAP_RS23535
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23535
old locus tag: Pnap_4941
so part of: sequence
location: complement(139571..140701)
location: region:139571-140701:-1
so has part: feature:139571-140701:-1:exon
subclass of: SO_0000010

position:139571:-1
position: 139571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140701:-1
position: 140701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139571-140701:-1:exon

PNAP_RS23535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23535
old locus tag: Pnap_4941
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTTFDDIEVRRPGIAQAYLALLAAQPGRPLALFAPRRVGKTFFLDHDLAPKAKEAGMLPVYADLWLHKSAPLEAVNHALEEALDDLRVPRSHLGKLAKTPVKKIGALGASLDLGDEPQRRPLPESAALRLDALVTRLARQHKGQVLLMLDEVQTLGEVPDGVSLIASLRAVLHKRREDVAAVFTGSSQEGLARLMTTAGAPMYQFAQIIDFPFLGDEFLRLLAAHFSKVHPGKTLEMVELRDGFQRIGFKPALMRDVVKAMSAEGITDVARGIDNYMASGHQVAIWRALLNSVDAFDQGVLVVVAKGQPPLSQATLETLATIPGSKPTISKVRSSIEKLKRNGLLSKNAGGTTIDDPLFAEFLSKKGSMGLALPIA
SIO_010081: PNAP_RS23535
subclass of: SO_0000673
so part of: PNAP_RS23535
location: complement(139571..140701)
location: region:139571-140701:-1
so has part: feature:139571-140701:-1:exon

WP_157040531.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:139571-140701:-1:exon

PNAP_RS23540
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23540
old locus tag: Pnap_R0063
so part of: sequence
location: 141203..141279
location: region:141203-141279:1
so has part: feature:141203-141279:1:exon
subclass of: SO_0000663

position:141203:1
position: 141203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141279:1
position: 141279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141203-141279:1:exon

PNAP_RS23540
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 365044
locus tag: PNAP_RS23540
old locus tag: Pnap_R0063
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:141237..141239,aa:Met,seq:cat)
SIO_010081: PNAP_RS23540
subclass of: SO_0000673
so part of: PNAP_RS23540
location: 141203..141279
location: region:141203-141279:1
so has part: feature:141203-141279:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:141203-141279:1:exon

PNAP_RS23545
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23545
old locus tag: Pnap_4942
pseudo: true
so part of: sequence
location: 141684..142117
location: region:141684-142117:1
so has part: feature:141684-142117:1:exon
subclass of: SO_0000010

position:141684:1
position: 141684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142117:1
position: 142117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141684-142117:1:exon

PNAP_RS23545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23545
old locus tag: Pnap_4942
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005671502.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: lipocalin family protein
SIO_010081: PNAP_RS23545
subclass of: SO_0000673
so part of: PNAP_RS23545
location: 141684..142117
location: region:141684-142117:1
so has part: feature:141684-142117:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:141684-142117:1:exon

PNAP_RS26440
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS26440
old locus tag: Pnap_4944
so part of: sequence
location: 142355..142687
location: region:142355-142687:1
so has part: feature:142355-142687:1:exon
subclass of: SO_0000010

position:142355:1
position: 142355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142687:1
position: 142687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142355-142687:1:exon

PNAP_RS26440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS26440
old locus tag: Pnap_4944
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798377.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YnfA family protein
translation: MELLRLAILFAVTALAEIVGCYLPWLVLKQGKSLLLLVPAAMSLGLFAWLLTLHPSAAGRTYAAYGGMYIAVALGWLRFVDGIALTRWDLSGAAIALVGMAVIVMQPSTT
SIO_010081: PNAP_RS26440
subclass of: SO_0000673
so part of: PNAP_RS26440
location: 142355..142687
location: region:142355-142687:1
so has part: feature:142355-142687:1:exon

WP_011798377.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:142355-142687:1:exon

PNAP_RS23550
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23550
old locus tag: Pnap_4945
so part of: sequence
location: 142898..143791
location: region:142898-143791:1
so has part: feature:142898-143791:1:exon
subclass of: SO_0000010

position:142898:1
position: 142898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143791:1
position: 143791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142898-143791:1:exon

PNAP_RS23550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23550
old locus tag: Pnap_4945
inference: COORDINATES: protein motif:HMM:NF018983.2
GO function: GO:0016977 - chitosanase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycoside hydrolase family 75 protein
translation: MLLGSCLGPALAADCDGSLVPGLGGVRRAWQLADGGVAGFARLNINIDGYARAYHPRNAEAGALIHLCNAGRVYLPDGSSYEGSESNATCSGRFMRDVARIGAAGWTNPSIGAVNWYGILGRGSARVNGRAIQSVVPVLQKDGSGFYVSPTTLADRSIADEAEQSRYVNPLRIAAAVAPRSLVAKGVAMGSFGVAYNVNRRIAVPFVVGDAGPRIGEGSVALARLAAGLALKDDVTRAERFAGQVDAPDVLWVFFKDAAEKFDSHNEAATTAKAKAAYQAWGGDTRLARCVEQVPRN
SIO_010081: PNAP_RS23550
subclass of: SO_0000673
so part of: PNAP_RS23550
location: 142898..143791
location: region:142898-143791:1
so has part: feature:142898-143791:1:exon

WP_198140739.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:142898-143791:1:exon

PNAP_RS26445
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS26445
old locus tag: Pnap_4946
so part of: sequence
location: 143958..144230
location: region:143958-144230:1
so has part: feature:143958-144230:1:exon
subclass of: SO_0000010

position:143958:1
position: 143958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144230:1
position: 144230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143958-144230:1:exon

PNAP_RS26445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS26445
old locus tag: Pnap_4946
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019923460.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1272 domain-containing protein
translation: MLELRPNCECCDRDLPPESGEARICSFECTSCVSCAQTVLMGICPNCGGELVARPRRPAGKLASNPASTERIFKPGGCAKSALVEQASGA
SIO_010081: PNAP_RS26445
subclass of: SO_0000673
so part of: PNAP_RS26445
location: 143958..144230
location: region:143958-144230:1
so has part: feature:143958-144230:1:exon

WP_011798379.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:143958-144230:1:exon

PNAP_RS28070
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS28070
pseudo: true
so part of: sequence
location: complement(144385..>144519)
location: region:144385-144519:-1
so has part: feature:144385-144519:-1:exon
subclass of: SO_0000010

position:144385:-1
position: 144385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144519:-1
position: 144519
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144385-144519:-1:exon

PNAP_RS28070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS28070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000597179.1
GO component: GO:0019867 - outer membrane [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: glycine zipper 2TM domain-containing protein
SIO_010081: PNAP_RS28070
subclass of: SO_0000673
so part of: PNAP_RS28070
location: complement(144385..>144519)
location: region:144385-144519:-1
so has part: feature:144385-144519:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:144385-144519:-1:exon

PNAP_RS23560
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23560
old locus tag: Pnap_4948
so part of: sequence
location: 145208..145828
location: region:145208-145828:1
so has part: feature:145208-145828:1:exon
subclass of: SO_0000010

position:145208:1
position: 145208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145828:1
position: 145828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145208-145828:1:exon

PNAP_RS23560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23560
old locus tag: Pnap_4948
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011463722.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyltransferase domain-containing protein
translation: MAGPTTDFWQARFDNKETGWDRGAPGPQLLAWLESGALQPCRIAVPGCGSGWEVAELARRGFEVVGIDYTPAAVERTRALLAAQGLAAEVVQADVLAYQPHKPFEAIYEQTCLCALHPDHWVAYARQLQQWLKPQGSIWALFMQMVRPEATDEGLIQGPPYHCDINAMRALFPAQHWAWPRPPYAKVPHPNVGHELGLRLMLRQGR
SIO_010081: PNAP_RS23560
subclass of: SO_0000673
so part of: PNAP_RS23560
location: 145208..145828
location: region:145208-145828:1
so has part: feature:145208-145828:1:exon

WP_011798381.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:145208-145828:1:exon

PNAP_RS23565
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23565
old locus tag: Pnap_4949
so part of: sequence
location: 145825..146178
location: region:145825-146178:1
so has part: feature:145825-146178:1:exon
subclass of: SO_0000010

position:145825:1
position: 145825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146178:1
position: 146178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145825-146178:1:exon

PNAP_RS23565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23565
old locus tag: Pnap_4949
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012070465.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3024 domain-containing protein
translation: MTLALTELERKRCDKALADFMARRRPPPHLRDQLDLGFRMEGQCIEIFEIRPDWKDDSVRHESPVAKATFVRTQGLWKVFWMRADLKWHGYQPKAEVNTLKEFLGAFDRDEHGCFFG
SIO_010081: PNAP_RS23565
subclass of: SO_0000673
so part of: PNAP_RS23565
location: 145825..146178
location: region:145825-146178:1
so has part: feature:145825-146178:1:exon

WP_011798382.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:145825-146178:1:exon

PNAP_RS23570
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23570
pseudo: true
so part of: sequence
location: 146697..147935
location: region:146697-147935:1
so has part: feature:146697-147935:1:exon
subclass of: SO_0000010

position:146697:1
position: 146697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147935:1
position: 147935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146697-147935:1:exon

PNAP_RS23570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23570
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798261.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS4 family transposase
SIO_010081: PNAP_RS23570
subclass of: SO_0000673
so part of: PNAP_RS23570
location: 146697..147935
location: region:146697-147935:1
so has part: feature:146697-147935:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:146697-147935:1:exon

PNAP_RS23575
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23575
old locus tag: Pnap_4955
so part of: sequence
location: 148844..149683
location: region:148844-149683:1
so has part: feature:148844-149683:1:exon
subclass of: SO_0000010

position:148844:1
position: 148844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149683:1
position: 149683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148844-149683:1:exon

PNAP_RS23575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23575
old locus tag: Pnap_4955
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011051225.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: serine/threonine-protein kinase
translation: MSGAPDLAAAAAALCKQRNFEFCGDLGKGAFKSAYLAKTGNDAFALKLAVVSGSPERLIRETAALQGCSHPSIARVLEAFPYQYEALTMWVVMEEFLDGGTLEQHLKSGPLSPEMVRAIGLSLAEVLEHLHERRLVHRDIKPANILFRGGVPVLTDFGIVRMLDQPSLTHAFLAMGPGTPAYAAPEQLTNEKALIDWRTDQFGLAIVLSECLTGHHPYLETGRSIHEAILALSAKQEIPHSSRDELVRLGFSSLVQALKPWPIARYRKPAHLINALKQT
SIO_010081: PNAP_RS23575
subclass of: SO_0000673
so part of: PNAP_RS23575
location: 148844..149683
location: region:148844-149683:1
so has part: feature:148844-149683:1:exon

WP_011798387.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:148844-149683:1:exon

PNAP_RS23580
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23580
old locus tag: Pnap_4956
so part of: sequence
location: 149694..150842
location: region:149694-150842:1
so has part: feature:149694-150842:1:exon
subclass of: SO_0000010

position:149694:1
position: 149694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150842:1
position: 150842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149694-150842:1:exon

PNAP_RS23580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23580
old locus tag: Pnap_4956
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015463133.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAAYLQQGHGSWGLLEEEDIGVYKGLVLSPVNDSPDGVRNGLARLKEKRKELEVILDPQLYNPTIDKGRLNEWDYYSADFETADHSDASWWSARGREVVDNALQLGVDAVCSPALFPREFSDEYYQLIVEVADATCAYASKNNIETLLTAIICLKDLGNPARALQIASILSNTNCERIYLTFLSEDVQTREPLQDAAALPTAVHLVRLLSQHLRVHVAFCAHDLVLWKFAGATDISTGKFFNLRRFSPGRWRDDDSTGRQVAYWNEGPLVTLLRDQEVLRLDREHWFDERSFTSNPAGEQILSILRGGTGNPWQKLSWLQYLRWAYNTDKLLSDAGKAEKALEHWDGKWGEIRAKRILFTDRFNNGDHVRIWLNAVREGGVR
SIO_010081: PNAP_RS23580
subclass of: SO_0000673
so part of: PNAP_RS23580
location: 149694..150842
location: region:149694-150842:1
so has part: feature:149694-150842:1:exon

WP_011798388.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:149694-150842:1:exon

PNAP_RS28075
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS28075
pseudo: true
so part of: sequence
location: complement(150973..>151104)
location: region:150973-151104:-1
so has part: feature:150973-151104:-1:exon
subclass of: SO_0000010

position:150973:-1
position: 150973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151104:-1
position: 151104
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150973-151104:-1:exon

PNAP_RS28075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS28075
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015603553.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: oxidoreductase
SIO_010081: PNAP_RS28075
subclass of: SO_0000673
so part of: PNAP_RS28075
location: complement(150973..>151104)
location: region:150973-151104:-1
so has part: feature:150973-151104:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:150973-151104:-1:exon

PNAP_RS23585
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23585
old locus tag: Pnap_4957
so part of: sequence
location: 151158..152231
location: region:151158-152231:1
so has part: feature:151158-152231:1:exon
subclass of: SO_0000010

position:151158:1
position: 151158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152231:1
position: 152231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151158-152231:1:exon

PNAP_RS23585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23585
old locus tag: Pnap_4957
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNSYQVVTSIPEIELLNRRLAVNLKKSYSFQKEREVTSPAGKFIAKVNFQASAGTAIRAWTGLTHKDKLLNLFFVGEPRGAELLDIVVQLNFPALTYQRRVAGAFVKDQNGAVFVAHRGNLTKGNGALKKADVLREFSSQQIEAADNKQTAKLILISGLADLTLVTRLGEFADEARDVAIKLGKQAKQAKAAAARGGARQGATTTNPPRPGRVRATAGMKLQQYFDEYAGTGSTKGHEGGQRTVEHGHIVKALEAHQRHTGESQKAQAIDLAVVAQHQVNLFEVKTSAKTTDVYTGVGQLIIHGESICERLTLPVHRFLVLPEMPNSLHAKHIQGKAEVRIVTYQKVQGGYEFIGL
SIO_010081: PNAP_RS23585
subclass of: SO_0000673
so part of: PNAP_RS23585
location: 151158..152231
location: region:151158-152231:1
so has part: feature:151158-152231:1:exon

WP_011798389.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:151158-152231:1:exon

PNAP_RS23590
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23590
old locus tag: Pnap_4958
so part of: sequence
location: complement(152272..152742)
location: region:152272-152742:-1
so has part: feature:152272-152742:-1:exon
subclass of: SO_0000010

position:152272:-1
position: 152272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152742:-1
position: 152742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152272-152742:-1:exon

PNAP_RS23590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23590
old locus tag: Pnap_4958
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTNCIATTYELQVEQWQYKANVSCRILYKEGLGSCIGIAVGYGNKLFLCHFPNASYGGAIDDFFAELESNIPDTNRLFIRPVVTGGQLGRETTDMGQDRDYVLDKLISLGFGKPHLCWCGPKDFCQDLSLDTTVAEIKVTTYPKAGSTLTENAFSF
SIO_010081: PNAP_RS23590
subclass of: SO_0000673
so part of: PNAP_RS23590
location: complement(152272..152742)
location: region:152272-152742:-1
so has part: feature:152272-152742:-1:exon

WP_157040532.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:152272-152742:-1:exon

PNAP_RS23595
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23595
old locus tag: Pnap_4959
so part of: sequence
location: complement(153173..154687)
location: region:153173-154687:-1
so has part: feature:153173-154687:-1:exon
subclass of: SO_0000010

position:153173:-1
position: 153173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:154687:-1
position: 154687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153173-154687:-1:exon

PNAP_RS23595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23595
old locus tag: Pnap_4959
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNRHFSRQNDSQPDVPSRAYGRVDHLERDDKRPNRVLLGIDLIDANWLDHQGVVDPSLDLSLPSEKLDRLWKVRIRSLGPGAANPFENAPLYRLELEIDAGDPLAQNLRVPHHQDPFSRQRVAAMERSWFTLELRPGANPDNPALLYGGLFAPAAPVTVKGAMPSEQKIAKALDQMFTLRHLTQLTSKDFAREVGTPHADYLAVYDVGQGNANALAVNSYGWLVPTLYFDLGAGVYRNAKTRPNDLRFCFSYNPVIVLSHWDADHWAGAYATLVNNTYPALKQKWIAPLQKVGPTHTAFAYDVKISGGTFQTYAGAGGSFGSVLLPGHRTLHYARGSGPDRNGSGLVLVVENNELPPPRSWLLTGDCDYADFVPILNPVNPIGMVAPHHGASLAPDSPIPPPAALPYRRLAYSYGHENAHGNKCPPTRHPTQKGTTAHANAGWNHNAWSLNKPGTTTPGGNVLATCEHAPGTSRGGAVIGWHSPPGPMTLSCPHKLCSAQCTQR
SIO_010081: PNAP_RS23595
subclass of: SO_0000673
so part of: PNAP_RS23595
location: complement(153173..154687)
location: region:153173-154687:-1
so has part: feature:153173-154687:-1:exon

WP_157040533.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:153173-154687:-1:exon

PNAP_RS23600
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23600
old locus tag: Pnap_4960
so part of: sequence
location: complement(154791..155435)
location: region:154791-155435:-1
so has part: feature:154791-155435:-1:exon
subclass of: SO_0000010

position:154791:-1
position: 154791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155435:-1
position: 155435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154791-155435:-1:exon

PNAP_RS23600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23600
old locus tag: Pnap_4960
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSEEKLKKLLGRTADLHKAVQTHVCNLNPFEDCRSQVSFQAGLLSLEHATGAFVLINSNLLPSAYALMRPQYESLVRGIWVLHTANDSWVEKLGKPLTVETARRANEGPMLAEMLKGLEASSTAPQGIVGQLKEYRDVTWKALNSYAHGGLHPMARTVSGYPAQLSYDVVRNSNAVVALTTQLLSILTGDPRHMNPVRKLHVEFADCLPIVGYR
SIO_010081: PNAP_RS23600
subclass of: SO_0000673
so part of: PNAP_RS23600
location: complement(154791..155435)
location: region:154791-155435:-1
so has part: feature:154791-155435:-1:exon

WP_011798392.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:154791-155435:-1:exon

PNAP_RS23605
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23605
old locus tag: Pnap_4961
so part of: sequence
location: complement(155436..158180)
location: region:155436-158180:-1
so has part: feature:155436-158180:-1:exon
subclass of: SO_0000010

position:155436:-1
position: 155436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158180:-1
position: 158180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155436-158180:-1:exon

PNAP_RS23605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23605
old locus tag: Pnap_4961
inference: COORDINATES: protein motif:HMM:NF012789.2
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UvrD-helicase domain-containing protein
translation: MAQSWGPSGPGKLFTNSPAWNLTLDGEQFALEVRGKAQTGSVLLLESLAIEPGTFWTALHFPSKNGKRQSLDGIPNEEAASLRQTLFSTIEQIRHRERVQALLKDFNTVTAPVLTWAKQAVQAAKDQLQKKGWLTHEFVQRQNEGKPTGLSKYLSTPEVANHVEKQSAQFHADLKFWKHDFSIFAKGVNERHLAKELIGSKEFFDSVEKSPLTDEQAKAVVCFDNRVLLVASAGSGKTSTMVAKAGYALKMGYCEADRMLLLAFNNDAAAELRQRIQDRLGPLGLPADKVVAKTFHAFGLDVIGLATGKRPSLAPWVENGKDLEQLMAIVDDLKDRDTGFRISWDLFRVVLGQDLPKFGKEAQAPDSWDRNSKKEGFRTLNNEVVKSRGEQLIANWFFYNGVRYVYEGAYEVDTADAHHRQYYPDFYLPDAKAYLEHWALDANGQAPPDFVGYQEGMEWKKQVHAANGTKLLETTVAQLWSGKAFEYLQTQLQQLGVTLEPNPDRPVPGRKAIENPRLAKTFRSFITHAKSNRLDLGDLKKRLESGVAGDFKFRHTMFLGLLEKIWTQWEAQLTKDKCIDFDDMLNLATDCVEQGKWKSPYELVMVDEFQDASQARARLVAGLVSGPDKCLFAVGDDWQSINRFAGADLAVMTDFERRYGSAVTLKLETTFRCPQSLCDISSAFVQKNPKQLRKAVRSSKPNLAEPVLIIRVDDERQIRAAVQMRLGEISRENATVGRKPKVLMLGRYQKDKAYLPYANDALELDFITVHSSKGLEADHIILPRMTSETMGFPSQIADDPVLLLAMPGGDAFENAEERRLFYVALTRARATVTLITITLKESAFVKELVREHQITVRMADGTESSNELCSVCGDGFVVPKNGKYGAFLGCSNYPRCRHTRNIEQNEVRNHSRKH
SIO_010081: PNAP_RS23605
subclass of: SO_0000673
so part of: PNAP_RS23605
location: complement(155436..158180)
location: region:155436-158180:-1
so has part: feature:155436-158180:-1:exon

WP_011798393.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:155436-158180:-1:exon

PNAP_RS26455
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS26455
old locus tag: Pnap_4962
so part of: sequence
location: complement(158198..158662)
location: region:158198-158662:-1
so has part: feature:158198-158662:-1:exon
subclass of: SO_0000010

position:158198:-1
position: 158198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158662:-1
position: 158662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158198-158662:-1:exon

PNAP_RS26455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS26455
old locus tag: Pnap_4962
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013516329.1
GO component: GO:0005694 - chromosome [Evidence IEA]
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: topoisomerase DNA-binding C4 zinc finger domain-containing protein
translation: MGRRRKTSPAEDFIAIASKLPWWLALGLAVISYFLLHAFASQPLTAAPAPGQMTSFLMPVLLKGLATAGQYILPLLFGVAALLSGVQQRKRSSSPQPLSGFSAEPHQANAGISPHCPVCSSSMVRRDAKRGANAGKSFWGCSQYPRCKGTQAAG
SIO_010081: PNAP_RS26455
subclass of: SO_0000673
so part of: PNAP_RS26455
location: complement(158198..158662)
location: region:158198-158662:-1
so has part: feature:158198-158662:-1:exon

WP_011798394.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:158198-158662:-1:exon

PNAP_RS23610
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23610
old locus tag: Pnap_4963
so part of: sequence
location: 158808..159566
location: region:158808-159566:1
so has part: feature:158808-159566:1:exon
subclass of: SO_0000010

position:158808:1
position: 158808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159566:1
position: 159566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158808-159566:1:exon

PNAP_RS23610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23610
old locus tag: Pnap_4963
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSEKELLQAKLNDFYRTTLAGAKPLFDDKHLRELSAPLLISISEAYLRAPVRVMFVGKETNGWWGKLSAYYADEDALASLMQRYQQQMGKSKWTGRFFQMLSRTARELNGAPAEAIAWTNLMRTDWEQGKGYSRNSKEFSAALTKMSQDMLRFEVELLEPDVIIFACGTSYDSVIKEAFPHRTNSEPVVKRALWQFNVGKILCFRCQHPQVIRKKNSAFKPVNTYYAEIFARVKANFPDAYDVPMAGNISNA
SIO_010081: PNAP_RS23610
subclass of: SO_0000673
so part of: PNAP_RS23610
location: 158808..159566
location: region:158808-159566:1
so has part: feature:158808-159566:1:exon

WP_011798395.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:158808-159566:1:exon

PNAP_RS23620
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23620
old locus tag: Pnap_4964
so part of: sequence
location: 160251..161261
location: region:160251-161261:1
so has part: feature:160251-161261:1:exon
subclass of: SO_0000010

position:160251:1
position: 160251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161261:1
position: 161261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160251-161261:1:exon

PNAP_RS23620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23620
old locus tag: Pnap_4964
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDSNYLQQQRFLLQKKVKRLNSCDYKLFHSLVVQFWGYLRSHSLYAGVLAKLAAEAPPYVDEVAATSKGNVYLWDTEQDAVHFCFRVWEYCASEPLGKGNGPEVMIGRGIAGGSKFAEMLEGFRDAYLEPFYEYLDEALDGQAAVLSLLLKYKRHVEWFEREEVNALVSKGGERTVAKHMYAYLFDQGLEFHIEPQSISGEADLVAPELVLDAKLFDGNSSSHGKRYVLSGVNQLLTYTRDFHQQVGYLVVYRTCQEDLQFSFARTDMLVPFMVIDGRTIYFLVVDVCEYGASASKRGLLKTHVISEDEVRTVIKEQASLDSSSAPPPAEPATEAA
SIO_010081: PNAP_RS23620
subclass of: SO_0000673
so part of: PNAP_RS23620
location: 160251..161261
location: region:160251-161261:1
so has part: feature:160251-161261:1:exon

WP_011798396.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160251-161261:1:exon

PNAP_RS23625
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23625
so part of: sequence
location: 161308..161562
location: region:161308-161562:1
so has part: feature:161308-161562:1:exon
subclass of: SO_0000010

position:161308:1
position: 161308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161562:1
position: 161562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161308-161562:1:exon

PNAP_RS23625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23625
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTNMVQELQRLTAHGVIGLYRSFEITEILGFLQGQPHTQPPVNFLSLAVAEPDDSPVGEIREMPFLNQNRLVLSGTVATVSKRF
SIO_010081: PNAP_RS23625
subclass of: SO_0000673
so part of: PNAP_RS23625
location: 161308..161562
location: region:161308-161562:1
so has part: feature:161308-161562:1:exon

WP_041377730.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:161308-161562:1:exon

PNAP_RS23630
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23630
old locus tag: Pnap_4965
so part of: sequence
location: complement(161630..164164)
location: region:161630-164164:-1
so has part: feature:161630-164164:-1:exon
subclass of: SO_0000010

position:161630:-1
position: 161630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164164:-1
position: 164164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161630-164164:-1:exon

PNAP_RS23630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23630
old locus tag: Pnap_4965
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRLFDAFEGAGYHSSVCTTFEIDFAAYESVALPRLRGKGCNNNVLVADSRMLSHAIDSRKLPRLAGSKYSVVGIAPTGVFHPKLLLQIGYGQGRLLVASANMTSSGLAGNLEVVGQVVLSNPAGPEAGLLRAAFDYVLALLPQGMTAAREQLNWALLRAPWLQAATPTDVIVDEKGYVDTRLLAHNRSASIGSRFVEAVGTTPIRRLVVISPYWDETLAALKGLNEALKPTEIALLLQPEIGLFPKDALGCAMPVQIFPIGPAAGVGKASRFVHAKVLIAQSDDADHVLYGSTNCTVAALGSDKFAGSNHEVALYRRLKPGEALELLGLNAILTSEKLIAIETLPEFQKGESIPLDECQRRGSGYFELAGDILRWQKPSWLAGAQHKLEFLDTRGAVLLAELTPLKDDGLTATFVLNLSVLPTFARMVNEDDERFSASVVTSLDELRRSQMTEKAKKAQTPLDELDDLETLEDLRLLDIFGELLKAETGKAAPIPGISRSPTGQETNSSEGARMLSYDEFLAHRVVPSEVGALRESSLSANLIDSLRAMLNRVLGIGVPSERRFVEQPEPDAKQIHALFNRGDQTRNRKNVVEFGGESGQNPTMLNVTVPSDRREKVKKRQEAFKQTQGMVVNWVNKLLMEQGKLAPKVGVSNQALLQLRTLLQAILLTGSSSENLLAQQGISSRRSSALLPCRGENSWPLLAGRLLLEMFRVKSVASPPLFSFPSPDRNAKTPSVDVAEFLFICQWVTQAACSAVDSQGTPVKPLRGMTELRGDLYRAVRDYLGDATQAQLRNQVWDGLDRRYAEHLGVNAQSVRAEHALTEKALASATASQKSPATAWSAQI
SIO_010081: PNAP_RS23630
subclass of: SO_0000673
so part of: PNAP_RS23630
location: complement(161630..164164)
location: region:161630-164164:-1
so has part: feature:161630-164164:-1:exon

WP_011798397.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:161630-164164:-1:exon

PNAP_RS23635
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23635
old locus tag: Pnap_4966
so part of: sequence
location: complement(164161..165822)
location: region:164161-165822:-1
so has part: feature:164161-165822:-1:exon
subclass of: SO_0000010

position:164161:-1
position: 164161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165822:-1
position: 165822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164161-165822:-1:exon

PNAP_RS23635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23635
old locus tag: Pnap_4966
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVENEDKQDLETRLEADLETETIVDGMEVDNVLARPAGAPEWTDMAEKNGLDPLGMQSLCISLYQSLVPGIANVTLRIRYYGFYAWLTWRYERAGASDSKDKWRQYIRRAEALCALVTLRGNLAETGISGAIWARKMLQQKSVVLKFREGTDLESGVAQYLKQNMGAFGAAYGAQVIEIGLLVPSTVNGIPVPSEIGQQMAQVFDDAVGACGDKFLEAAARGSVSLAELDALILMSLSKIPDTERDVYETLLLAPSTERAQDLKRRRTLELILRITDQLKKQVGALDIRWSAYSGLALNGASLVLPGSELEQHRYSWAVYHANDLLHMAYECLLKFSLQHLAKSAAGLRPQTLMSEVATAILTEWDIAPKTWSELEAETTLAQDAGSAYDPLSEYRLTEQVMFSSAVTAECTAESAKAAVLLLAVLSKRFSPEEARYRAVLGPLVTQDYVWSLYSELRFLQSSKLEPLPRTLQKLVLERVLERHLWVAFQKLHYRKDYTFLVESQDGILRTRKLDGPMLTNPRLGSAVDFLKDIRLVDLEGLTQAGRAALEQL
SIO_010081: PNAP_RS23635
subclass of: SO_0000673
so part of: PNAP_RS23635
location: complement(164161..165822)
location: region:164161-165822:-1
so has part: feature:164161-165822:-1:exon

WP_011798398.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:164161-165822:-1:exon

PNAP_RS23640
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23640
old locus tag: Pnap_4967
so part of: sequence
location: complement(166119..167432)
location: region:166119-167432:-1
so has part: feature:166119-167432:-1:exon
subclass of: SO_0000010

position:166119:-1
position: 166119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167432:-1
position: 167432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166119-167432:-1:exon

PNAP_RS23640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23640
old locus tag: Pnap_4967
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018915113.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication-relaxation family protein
translation: MKKQPREPSPSPREAQTPFTENALTYPGDAPTDATVDTKAGKLPTIHAGNDTVRPQKTRSLAPVTKENTPPRKVERGLAATISTTKLKQAIWLRTLLTANRFRVIRTIDVAVCCFAERPYKAALTAAQRAMRGLVKADFLKRYRTERHNTIYGLTQHGVDWLDEAGHDASSSVRQVSTMTNPEHRLWAQFWVLACEARGMKAQTEQELLQSLNKGVKPGEALVQGLLTVTTMRGKRASTIQLRPDAVAYEKDGITWLEVDRSKRGSDREASLAALVSSVGRVLKEGSTLRRLVIFCKTERIRKRALAVVNGLALANNPEVLIEGRRHFREVEPGTYAVWTALESKLKDGRTKLVDTLVGHVIVQLLPIWLPKVRIDASNTHSFAGWFGENYLPYRRPKSLGPWSSPFSPFAAPQEIEHSTWPIRPEYDCHLCSEKER
SIO_010081: PNAP_RS23640
subclass of: SO_0000673
so part of: PNAP_RS23640
location: complement(166119..167432)
location: region:166119-167432:-1
so has part: feature:166119-167432:-1:exon

WP_157040535.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:166119-167432:-1:exon

PNAP_RS27420
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS27420
so part of: sequence
location: 167431..167724
location: region:167431-167724:1
so has part: feature:167431-167724:1:exon
subclass of: SO_0000010

position:167431:1
position: 167431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167724:1
position: 167724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167431-167724:1:exon

PNAP_RS27420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS27420
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVIGFSVGFSKPPNPMFFHGLNLAVLTSSDLETMPCHLVPPTCTPRAHDATVGFSTDVGIIAKGQGGNRGFSSGGLLHAGALASNTLSLQCPIKRQL
SIO_010081: PNAP_RS27420
subclass of: SO_0000673
so part of: PNAP_RS27420
location: 167431..167724
location: region:167431-167724:1
so has part: feature:167431-167724:1:exon

WP_157040536.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:167431-167724:1:exon

PNAP_RS23650
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23650
old locus tag: Pnap_4969
so part of: sequence
location: 168693..169091
location: region:168693-169091:1
so has part: feature:168693-169091:1:exon
subclass of: SO_0000010

position:168693:1
position: 168693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169091:1
position: 169091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168693-169091:1:exon

PNAP_RS23650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23650
old locus tag: Pnap_4969
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015866043.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GreA/GreB family elongation factor
translation: MFAAMNGERTLTELDFSRLMLKSGQLPAELESSFEFPHLVASRDIPADVITMYSQVEIVDPLSHRRQKLTICYPGDAEPALGFISVLSPVGTSLLGLSVGATAHWRTPTGDLCTAQVTALLFQPEASGDYTT
SIO_010081: PNAP_RS23650
subclass of: SO_0000673
so part of: PNAP_RS23650
location: 168693..169091
location: region:168693-169091:1
so has part: feature:168693-169091:1:exon

WP_011798401.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:168693-169091:1:exon

PNAP_RS23655
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS23655
old locus tag: Pnap_4970
so part of: sequence
location: 169246..170190
location: region:169246-170190:1
so has part: feature:169246-170190:1:exon
subclass of: SO_0000010

position:169246:1
position: 169246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170190:1
position: 170190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169246-170190:1:exon

PNAP_RS23655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS23655
old locus tag: Pnap_4970
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGTLRDLVGSTMVDRDSAYVRRMRFHQGWWRAFVLNEEQGPRSGRPAETVCNALPSIPKALGNFLSEAAQAAALKTVEERKSQGGAGLMDVSRLFGNLLSSQPLAFNFFGEFTDGAGSLALATAIFSQFVALDEVTKVCFEFAPGKPSGDNSAYDAAIEYTLNGKKGLVGIECKFTDSFSAEPYDKESYQKLYDASQTFDAAYEMLMAPRFNQLFRNQLLAEGFLKNADYNMVHTWLFCHPMDNAGKNTGDAFEQFIRGNAQTSFQVVTYDRFIAAAQQLDLSWKQREWTMLLWARYCATALSDEAFVEQSASA
SIO_010081: PNAP_RS23655
subclass of: SO_0000673
so part of: PNAP_RS23655
location: 169246..170190
location: region:169246-170190:1
so has part: feature:169246-170190:1:exon

WP_011798402.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:169246-170190:1:exon

PNAP_RS26460
type: Gene
subclass of: SO_0000704
RO_0002162: 365044
locus tag: PNAP_RS26460
old locus tag: Pnap_4971
so part of: sequence
location: 170410..170754
location: region:170410-170754:1
so has part: feature:170410-170754:1:exon
subclass of: SO_0000010

position:170410:1
position: 170410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170754:1
position: 170754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170410-170754:1:exon

PNAP_RS26460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 365044
locus tag: PNAP_RS26460
old locus tag: Pnap_4971
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKTNSVHKPSIPVRTVAHVYSDTAKAGKGQVPKGSFAAGVAKLATQHKPQAQKSGFAMAKPTSGHKLSIPVRTVAQVYSDTAKAGKGHVPKSSFASEVASLATQHKPQAPKGR
SIO_010081: PNAP_RS26460
subclass of: SO_0000673
so part of: PNAP_RS26460
location: 170410..170754
location: region:170410-170754:1
so has part: feature:170410-170754:1:exon

WP_157040537.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:170410-170754:1:exon