Chiloscyllium plagiosum isolate BGI_BamShark_2017 chromosome 41, ASM401019v2, whole genome shotgun sequence.
type: Entry
definition: Chiloscyllium plagiosum isolate BGI_BamShark_2017 chromosome 41, ASM401019v2, whole genome shotgun sequence.
sequence version: NC_057750.1
sequence date: 2021-09-20
sequence: sequence
division: CON
label: NC_057750.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA762070
dblink: SAMN09508879
keyword: WGS
keyword: RefSeq
source: Chiloscyllium plagiosum (whitespotted bambooshark)
organism: Chiloscyllium plagiosum
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Hemiscylliidae; Chiloscyllium.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM012996.1.\nAssembly name: ASM401019v2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the BGI on 2019/01/10. The\noriginal whole-genome shotgun project has the accession\nQPFF00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: BGI\nAssembly Method :: platanus v. 1.2.4; 3ddna v. 170123\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 280.0x\nSequencing Technology :: BGIseq-500\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Chiloscyllium plagiosum Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 20367195
topology: linear
so has quality: SO_0000987
location: 1..20367195
location: region:1-20367195:1
RO_0002162: 36176

NC_057750
type: RefSeq
SIO_000068: refseq

PRJNA762070
type: BioProject
SIO_000068: bioproject

SAMN09508879
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20367195:1
position: 20367195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-20367195:1:source
so part of: sequence
organism: Chiloscyllium plagiosum
mol type: genomic DNA
isolate: BGI_BamShark_2017
isolation source: bamboo shark captured from coastal area
chromosome: 41
sex: female
tissue type: blood
country: China: Fujian

36176
type: Taxonomy
SIO_000068: taxonomy

LOC122542725
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: LOC122542725
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7339..15702
location: region:7339-15702:1
so has part: feature:7339-15702:1:exon
subclass of: SO_0000010

122542725
type: Gene
SIO_000068: ncbigene

position:7339:1
position: 7339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15702:1
position: 15702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7339-15702:1:exon

LOC122542725
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542725
product: trafficking protein particle complex subunit 6b-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680701.1
SIO_010081: LOC122542725
subclass of: SO_0000673
so part of: LOC122542725
location: join(7339..7533,9152..9219,11274..11391,12119..12202,13192..13285,14615..15702)
location: region:7339-15702:1
so has part: feature:7339-7533:1:exon
so has part: feature:9152-9219:1:exon
so has part: feature:11274-11391:1:exon
so has part: feature:12119-12202:1:exon
so has part: feature:13192-13285:1:exon
so has part: feature:14615-15702:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7339-7533:1:exon

position:7533:1
position: 7533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9152-9219:1:exon

position:9152:1
position: 9152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9219:1
position: 9219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11274-11391:1:exon

position:11274:1
position: 11274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11391:1
position: 11391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12119-12202:1:exon

position:12119:1
position: 12119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12202:1
position: 12202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:13192-13285:1:exon

position:13192:1
position: 13192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13285:1
position: 13285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:14615-15702:1:exon

position:14615:1
position: 14615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC122542725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542725
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trafficking protein particle complex subunit 6b-like
translation: MVMGDAVLFELLHLEMVAQVYSEPESGDTEHGKSISTLEGMGFRAGQGLIERFTKETPSFKDELDIMKFICKEFWTNLFRKQIDNLRTNHQGTYVLQDNRFRLLTPVSNGKQYLEEAPKFLAFTCGLVRGALSNLGIDSTVTAEVSVMPACKFHIIMQKC
SIO_010081: LOC122542725
subclass of: SO_0000673
so part of: LOC122542725
location: join(7447..7533,9152..9219,11274..11391,12119..12202,13192..13285,14615..14646)
location: region:7447-14646:1
so has part: feature:7447-7533:1:exon
so has part: feature:9152-9219:1:exon
so has part: feature:11274-11391:1:exon
so has part: feature:12119-12202:1:exon
so has part: feature:13192-13285:1:exon
so has part: feature:14615-14646:1:exon

XP_043536636.1
type: Protein
SIO_000068: ncbiprotein

position:7447:1
position: 7447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14646:1
position: 14646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7447-7533:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9152-9219:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11274-11391:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12119-12202:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13192-13285:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14615-14646:1:exon

LOC122542726
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: LOC122542726
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 389778..570589
location: region:389778-570589:1
so has part: feature:389778-570589:1:exon
subclass of: SO_0000010

122542726
type: Gene
SIO_000068: ncbigene

position:389778:1
position: 389778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:570589:1
position: 570589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:389778-570589:1:exon

LOC122542726
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542726
product: leucine-rich repeat and fibronectin type III domain-containing protein 1-like protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 51 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_043680702.1
SIO_010081: LOC122542726
subclass of: SO_0000673
so part of: LOC122542726
location: join(389778..390724,531200..532603,536878..537458,552619..552735,563332..563680,570255..570589)
location: region:389778-570589:1
so has part: feature:389778-390724:1:exon
so has part: feature:531200-532603:1:exon
so has part: feature:536878-537458:1:exon
so has part: feature:552619-552735:1:exon
so has part: feature:563332-563680:1:exon
so has part: feature:570255-570589:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:389778-390724:1:exon

position:390724:1
position: 390724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:531200-532603:1:exon

position:531200:1
position: 531200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:532603:1
position: 532603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:536878-537458:1:exon

position:536878:1
position: 536878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537458:1
position: 537458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:552619-552735:1:exon

position:552619:1
position: 552619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552735:1
position: 552735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:563332-563680:1:exon

position:563332:1
position: 563332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:563680:1
position: 563680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:570255-570589:1:exon

position:570255:1
position: 570255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC122542726
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542726
product: leucine-rich repeat and fibronectin type III domain-containing protein 1-like protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 51 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_043680704.1
SIO_010081: LOC122542726
subclass of: SO_0000673
so part of: LOC122542726
location: join(389778..390724,531200..532603,536878..537458,552619..552735,563332..563680,567786..568142)
location: region:389778-568142:1
so has part: feature:389778-390724:1:exon
so has part: feature:531200-532603:1:exon
so has part: feature:536878-537458:1:exon
so has part: feature:552619-552735:1:exon
so has part: feature:563332-563680:1:exon
so has part: feature:567786-568142:1:exon

position:568142:1
position: 568142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:389778-390724:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:531200-532603:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:536878-537458:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:552619-552735:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:563332-563680:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:567786-568142:1:exon

position:567786:1
position: 567786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC122542726
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542726
product: leucine-rich repeat and fibronectin type III domain-containing protein 1-like protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 51 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_043680703.1
SIO_010081: LOC122542726
subclass of: SO_0000673
so part of: LOC122542726
location: join(522017..522034,531200..532603,536878..537458,552619..552735,563332..563680,570255..570589)
location: region:522017-570589:1
so has part: feature:522017-522034:1:exon
so has part: feature:531200-532603:1:exon
so has part: feature:536878-537458:1:exon
so has part: feature:552619-552735:1:exon
so has part: feature:563332-563680:1:exon
so has part: feature:570255-570589:1:exon

position:522017:1
position: 522017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:522017-522034:1:exon

position:522034:1
position: 522034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:531200-532603:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:536878-537458:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:552619-552735:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:563332-563680:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:570255-570589:1:exon

LOC122542726
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542726
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and fibronectin type III domain-containing protein 1-like protein
translation: MERLLFSLLLLSLTVKAQLCPKRCICQNLSPSLSILCAKTGLLFVPPFIDRRTVELRLTDNFITTVKRKDFANMTSLVHLTLSRNTISQIMPHTFGDLRGLRALHLDSNRLTRVNPEHFNGLINLRHLILSNNQLHYIAADSFDDFIVSLEDLDLSYNNLENLPWETIGKMTNVNSLSLDHNLIDFVPEGTFSNLHKLARLDMTSNKLHKLPPDPLFLRVQMFARTKGSPLTSLVLSFGGNPLHCNCELLWLRRLTREDDLETCASPPHLMGKYFWFIPEEEFTCDPPLITRHTSKTFVMEGQRAMLKCKAVGDPDPFIHWTSPDGRLISNSSRAITYENGTLHIIIATPKDSGTFTCIASNAGGEAMAQVELIVNPLPHFANGTNNIKEPDPGSSDITTSAKSGSPPVTNDTKATQDKKVIATDLTSSSVQIRWPSQRNIPGIRMYQVQYNSSSDDVLVYRMIPSSSKTFLVKDLVAGRDYDLCVLAVYDDGITTLTATRAVGCVQFTTEKEYTQCRSMHTQFLGGTMIIIIGGIIVASVLVFIIILMIRYKVYNNTGEHKTKVSNVYSQTNGSQNGAMPPSTSKLLESREEHVQEMLPDAPKGTLAVALTTDYDKASVTQSPSFPTEDITPHKRRRTRTDVPFSSKEIQGEDQERQVKQTAEHTMEPVERTDVKL
SIO_010081: LOC122542726
subclass of: SO_0000673
so part of: LOC122542726
location: join(531219..532603,536878..537458,552619..552686)
location: region:531219-552686:1
so has part: feature:531219-532603:1:exon
so has part: feature:536878-537458:1:exon
so has part: feature:552619-552686:1:exon

XP_043536637.1
type: Protein
SIO_000068: ncbiprotein

position:531219:1
position: 531219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552686:1
position: 552686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531219-532603:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:536878-537458:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:552619-552686:1:exon

LOC122542726
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542726
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and fibronectin type III domain-containing protein 1-like protein
translation: MERLLFSLLLLSLTVKAQLCPKRCICQNLSPSLSILCAKTGLLFVPPFIDRRTVELRLTDNFITTVKRKDFANMTSLVHLTLSRNTISQIMPHTFGDLRGLRALHLDSNRLTRVNPEHFNGLINLRHLILSNNQLHYIAADSFDDFIVSLEDLDLSYNNLENLPWETIGKMTNVNSLSLDHNLIDFVPEGTFSNLHKLARLDMTSNKLHKLPPDPLFLRVQMFARTKGSPLTSLVLSFGGNPLHCNCELLWLRRLTREDDLETCASPPHLMGKYFWFIPEEEFTCDPPLITRHTSKTFVMEGQRAMLKCKAVGDPDPFIHWTSPDGRLISNSSRAITYENGTLHIIIATPKDSGTFTCIASNAGGEAMAQVELIVNPLPHFANGTNNIKEPDPGSSDITTSAKSGSPPVTNDTKATQDKKVIATDLTSSSVQIRWPSQRNIPGIRMYQVQYNSSSDDVLVYRMIPSSSKTFLVKDLVAGRDYDLCVLAVYDDGITTLTATRAVGCVQFTTEKEYTQCRSMHTQFLGGTMIIIIGGIIVASVLVFIIILMIRYKVYNNTGEHKTKVSNVYSQTNGSQNGAMPPSTSKLLESREEHVQEMLPDAPKGTLAVALTTDYDKASVTQSPSFPTEDITPHKRRRTRTDVPFSSKEIQGEDQERQVKQTAEHTMEPVERTDVKL
SIO_010081: LOC122542726
subclass of: SO_0000673
so part of: LOC122542726
location: join(531219..532603,536878..537458,552619..552686)
location: region:531219-552686:1
so has part: feature:531219-532603:1:exon
so has part: feature:536878-537458:1:exon
so has part: feature:552619-552686:1:exon

XP_043536638.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:531219-532603:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:536878-537458:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:552619-552686:1:exon

LOC122542726
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542726
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and fibronectin type III domain-containing protein 1-like protein
translation: MERLLFSLLLLSLTVKAQLCPKRCICQNLSPSLSILCAKTGLLFVPPFIDRRTVELRLTDNFITTVKRKDFANMTSLVHLTLSRNTISQIMPHTFGDLRGLRALHLDSNRLTRVNPEHFNGLINLRHLILSNNQLHYIAADSFDDFIVSLEDLDLSYNNLENLPWETIGKMTNVNSLSLDHNLIDFVPEGTFSNLHKLARLDMTSNKLHKLPPDPLFLRVQMFARTKGSPLTSLVLSFGGNPLHCNCELLWLRRLTREDDLETCASPPHLMGKYFWFIPEEEFTCDPPLITRHTSKTFVMEGQRAMLKCKAVGDPDPFIHWTSPDGRLISNSSRAITYENGTLHIIIATPKDSGTFTCIASNAGGEAMAQVELIVNPLPHFANGTNNIKEPDPGSSDITTSAKSGSPPVTNDTKATQDKKVIATDLTSSSVQIRWPSQRNIPGIRMYQVQYNSSSDDVLVYRMIPSSSKTFLVKDLVAGRDYDLCVLAVYDDGITTLTATRAVGCVQFTTEKEYTQCRSMHTQFLGGTMIIIIGGIIVASVLVFIIILMIRYKVYNNTGEHKTKVSNVYSQTNGSQNGAMPPSTSKLLESREEHVQEMLPDAPKGTLAVALTTDYDKASVTQSPSFPTEDITPHKRRRTRTDVPFSSKEIQGEDQERQVKQTAEHTMEPVERTDVKL
SIO_010081: LOC122542726
subclass of: SO_0000673
so part of: LOC122542726
location: join(531219..532603,536878..537458,552619..552686)
location: region:531219-552686:1
so has part: feature:531219-532603:1:exon
so has part: feature:536878-537458:1:exon
so has part: feature:552619-552686:1:exon

XP_043536639.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:531219-532603:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:536878-537458:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:552619-552686:1:exon

LOC122542727
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: LOC122542727
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1130507..1342817)
location: region:1130507-1342817:-1
so has part: feature:1130507-1342817:-1:exon
subclass of: SO_0000010

122542727
type: Gene
SIO_000068: ncbigene

position:1130507:-1
position: 1130507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1342817:-1
position: 1342817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1130507-1342817:-1:exon

LOC122542727
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542727
product: leucine-rich repeat and fibronectin type III domain-containing protein 1-like protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 44 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_043680705.1
SIO_010081: LOC122542727
subclass of: SO_0000673
so part of: LOC122542727
location: complement(join(1130507..1132118,1342310..1342817))
location: region:1130507-1342817:-1
so has part: feature:1342310-1342817:-1:exon
so has part: feature:1130507-1132118:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1342310-1342817:-1:exon

position:1342310:-1
position: 1342310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1130507-1132118:-1:exon

position:1132118:-1
position: 1132118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC122542727
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542727
product: leucine-rich repeat and fibronectin type III domain-containing protein 1-like protein, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 44 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_043680708.1
SIO_010081: LOC122542727
subclass of: SO_0000673
so part of: LOC122542727
location: complement(join(1130507..1132118,1337693..1337765,1342310..1342817))
location: region:1130507-1342817:-1
so has part: feature:1342310-1342817:-1:exon
so has part: feature:1337693-1337765:-1:exon
so has part: feature:1130507-1132118:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1342310-1342817:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1337693-1337765:-1:exon

position:1337693:-1
position: 1337693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1337765:-1
position: 1337765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1130507-1132118:-1:exon

LOC122542727
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542727
product: leucine-rich repeat and fibronectin type III domain-containing protein 1-like protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 44 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_043680707.1
SIO_010081: LOC122542727
subclass of: SO_0000673
so part of: LOC122542727
location: complement(join(1130507..1132118,1340891..1340968,1342310..1342817))
location: region:1130507-1342817:-1
so has part: feature:1342310-1342817:-1:exon
so has part: feature:1340891-1340968:-1:exon
so has part: feature:1130507-1132118:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1342310-1342817:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1340891-1340968:-1:exon

position:1340891:-1
position: 1340891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1340968:-1
position: 1340968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1130507-1132118:-1:exon

LOC122542727
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542727
product: leucine-rich repeat and fibronectin type III domain-containing protein 1-like protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 44 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_043680706.1
SIO_010081: LOC122542727
subclass of: SO_0000673
so part of: LOC122542727
location: complement(join(1130507..1132118,1337693..1337765,1340891..1340968,1342310..1342817))
location: region:1130507-1342817:-1
so has part: feature:1342310-1342817:-1:exon
so has part: feature:1340891-1340968:-1:exon
so has part: feature:1337693-1337765:-1:exon
so has part: feature:1130507-1132118:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1342310-1342817:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1340891-1340968:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1337693-1337765:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1130507-1132118:-1:exon

LOC122542727
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542727
product: leucine-rich repeat and fibronectin type III domain-containing protein 1-like protein, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 44 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_043680709.1
SIO_010081: LOC122542727
subclass of: SO_0000673
so part of: LOC122542727
location: complement(join(1130507..1132118,1238740..1238776))
location: region:1130507-1238776:-1
so has part: feature:1238740-1238776:-1:exon
so has part: feature:1130507-1132118:-1:exon

position:1238776:-1
position: 1238776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1238740-1238776:-1:exon

position:1238740:-1
position: 1238740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1130507-1132118:-1:exon

LOC122542727
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542727
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and fibronectin type III domain-containing protein 1-like protein
translation: MERLLFSLLLLSLTVKAQLCPKRCICQNLSPSLSILCAKTGLLFVPPFIDRRTVELRLTDNFITTVKRKDFANMTSLVHLTLSRNTISQIMPLTFGDLRGLRALHLDSNRLTKLVNDHLKGLVNLRHLILNNNQLSYISEGSFNDFITCLEDLDMSYNNLEQFPWVAIAKMVNLNTLTLDHNLIDHIEEGTFSVLHKLGRLDMTSNRLQKLPPDPLFLRTQLLVNAKGTQYFSLVLSFGGNPLHCNCELLWLRRLTRKDDLETCASPPHLMGKYFWSISEDDFTCEPPLITRLYSSKTFVMEGQSVTLKCKAIGDPDPSILWSSPEGKLLSNTSRTMIYDNGTLDILITTLKDSGMFTCIASNAAGESTTNITIGIIPLPHLVNLTNQVQEPAPGSSDITTSTKSGSPSNGTDTKSLQDKKVVATELSTTSALIRWPSQRPIPGIRMYQIQYNSSTDDTLVYR
SIO_010081: LOC122542727
subclass of: SO_0000673
so part of: LOC122542727
location: complement(1130707..1132098)
location: region:1130707-1132098:-1
so has part: feature:1130707-1132098:-1:exon

XP_043536640.1
type: Protein
SIO_000068: ncbiprotein

position:1130707:-1
position: 1130707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1132098:-1
position: 1132098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1130707-1132098:-1:exon

LOC122542727
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542727
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and fibronectin type III domain-containing protein 1-like protein
translation: MERLLFSLLLLSLTVKAQLCPKRCICQNLSPSLSILCAKTGLLFVPPFIDRRTVELRLTDNFITTVKRKDFANMTSLVHLTLSRNTISQIMPLTFGDLRGLRALHLDSNRLTKLVNDHLKGLVNLRHLILNNNQLSYISEGSFNDFITCLEDLDMSYNNLEQFPWVAIAKMVNLNTLTLDHNLIDHIEEGTFSVLHKLGRLDMTSNRLQKLPPDPLFLRTQLLVNAKGTQYFSLVLSFGGNPLHCNCELLWLRRLTRKDDLETCASPPHLMGKYFWSISEDDFTCEPPLITRLYSSKTFVMEGQSVTLKCKAIGDPDPSILWSSPEGKLLSNTSRTMIYDNGTLDILITTLKDSGMFTCIASNAAGESTTNITIGIIPLPHLVNLTNQVQEPAPGSSDITTSTKSGSPSNGTDTKSLQDKKVVATELSTTSALIRWPSQRPIPGIRMYQIQYNSSTDDTLVYR
SIO_010081: LOC122542727
subclass of: SO_0000673
so part of: LOC122542727
location: complement(1130707..1132098)
location: region:1130707-1132098:-1
so has part: feature:1130707-1132098:-1:exon

XP_043536641.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1130707-1132098:-1:exon

LOC122542727
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542727
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and fibronectin type III domain-containing protein 1-like protein
translation: MERLLFSLLLLSLTVKAQLCPKRCICQNLSPSLSILCAKTGLLFVPPFIDRRTVELRLTDNFITTVKRKDFANMTSLVHLTLSRNTISQIMPLTFGDLRGLRALHLDSNRLTKLVNDHLKGLVNLRHLILNNNQLSYISEGSFNDFITCLEDLDMSYNNLEQFPWVAIAKMVNLNTLTLDHNLIDHIEEGTFSVLHKLGRLDMTSNRLQKLPPDPLFLRTQLLVNAKGTQYFSLVLSFGGNPLHCNCELLWLRRLTRKDDLETCASPPHLMGKYFWSISEDDFTCEPPLITRLYSSKTFVMEGQSVTLKCKAIGDPDPSILWSSPEGKLLSNTSRTMIYDNGTLDILITTLKDSGMFTCIASNAAGESTTNITIGIIPLPHLVNLTNQVQEPAPGSSDITTSTKSGSPSNGTDTKSLQDKKVVATELSTTSALIRWPSQRPIPGIRMYQIQYNSSTDDTLVYR
SIO_010081: LOC122542727
subclass of: SO_0000673
so part of: LOC122542727
location: complement(1130707..1132098)
location: region:1130707-1132098:-1
so has part: feature:1130707-1132098:-1:exon

XP_043536642.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1130707-1132098:-1:exon

LOC122542727
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542727
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and fibronectin type III domain-containing protein 1-like protein
translation: MERLLFSLLLLSLTVKAQLCPKRCICQNLSPSLSILCAKTGLLFVPPFIDRRTVELRLTDNFITTVKRKDFANMTSLVHLTLSRNTISQIMPLTFGDLRGLRALHLDSNRLTKLVNDHLKGLVNLRHLILNNNQLSYISEGSFNDFITCLEDLDMSYNNLEQFPWVAIAKMVNLNTLTLDHNLIDHIEEGTFSVLHKLGRLDMTSNRLQKLPPDPLFLRTQLLVNAKGTQYFSLVLSFGGNPLHCNCELLWLRRLTRKDDLETCASPPHLMGKYFWSISEDDFTCEPPLITRLYSSKTFVMEGQSVTLKCKAIGDPDPSILWSSPEGKLLSNTSRTMIYDNGTLDILITTLKDSGMFTCIASNAAGESTTNITIGIIPLPHLVNLTNQVQEPAPGSSDITTSTKSGSPSNGTDTKSLQDKKVVATELSTTSALIRWPSQRPIPGIRMYQIQYNSSTDDTLVYR
SIO_010081: LOC122542727
subclass of: SO_0000673
so part of: LOC122542727
location: complement(1130707..1132098)
location: region:1130707-1132098:-1
so has part: feature:1130707-1132098:-1:exon

XP_043536643.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1130707-1132098:-1:exon

LOC122542727
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542727
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and fibronectin type III domain-containing protein 1-like protein
translation: MERLLFSLLLLSLTVKAQLCPKRCICQNLSPSLSILCAKTGLLFVPPFIDRRTVELRLTDNFITTVKRKDFANMTSLVHLTLSRNTISQIMPLTFGDLRGLRALHLDSNRLTKLVNDHLKGLVNLRHLILNNNQLSYISEGSFNDFITCLEDLDMSYNNLEQFPWVAIAKMVNLNTLTLDHNLIDHIEEGTFSVLHKLGRLDMTSNRLQKLPPDPLFLRTQLLVNAKGTQYFSLVLSFGGNPLHCNCELLWLRRLTRKDDLETCASPPHLMGKYFWSISEDDFTCEPPLITRLYSSKTFVMEGQSVTLKCKAIGDPDPSILWSSPEGKLLSNTSRTMIYDNGTLDILITTLKDSGMFTCIASNAAGESTTNITIGIIPLPHLVNLTNQVQEPAPGSSDITTSTKSGSPSNGTDTKSLQDKKVVATELSTTSALIRWPSQRPIPGIRMYQIQYNSSTDDTLVYR
SIO_010081: LOC122542727
subclass of: SO_0000673
so part of: LOC122542727
location: complement(1130707..1132098)
location: region:1130707-1132098:-1
so has part: feature:1130707-1132098:-1:exon

XP_043536644.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1130707-1132098:-1:exon

LOC122542729
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: LOC122542729
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1745038..1763848)
location: region:1745038-1763848:-1
so has part: feature:1745038-1763848:-1:exon
subclass of: SO_0000010

122542729
type: Gene
SIO_000068: ncbigene

position:1745038:-1
position: 1745038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1763848:-1
position: 1763848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1745038-1763848:-1:exon

LOC122542729
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542729
product: glia maturation factor gamma-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680710.1
SIO_010081: LOC122542729
subclass of: SO_0000673
so part of: LOC122542729
location: complement(join(1745038..1745187,1750374..1750447,1753672..1753754,1755374..1755423,1757425..1757474,1758774..1758870,1763548..1763848))
location: region:1745038-1763848:-1
so has part: feature:1763548-1763848:-1:exon
so has part: feature:1758774-1758870:-1:exon
so has part: feature:1757425-1757474:-1:exon
so has part: feature:1755374-1755423:-1:exon
so has part: feature:1753672-1753754:-1:exon
so has part: feature:1750374-1750447:-1:exon
so has part: feature:1745038-1745187:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1763548-1763848:-1:exon

position:1763548:-1
position: 1763548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1758774-1758870:-1:exon

position:1758774:-1
position: 1758774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1758870:-1
position: 1758870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1757425-1757474:-1:exon

position:1757425:-1
position: 1757425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1757474:-1
position: 1757474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1755374-1755423:-1:exon

position:1755374:-1
position: 1755374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1755423:-1
position: 1755423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1753672-1753754:-1:exon

position:1753672:-1
position: 1753672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1753754:-1
position: 1753754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1750374-1750447:-1:exon

position:1750374:-1
position: 1750374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1750447:-1
position: 1750447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1745038-1745187:-1:exon

position:1745187:-1
position: 1745187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC122542729
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542729
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glia maturation factor gamma-like
translation: MSDSLVVCEVDPKLLEKLKKFRFRKETTNAAIIIKVDRESQQMVLEEEHEGISPDELRNEIPERQPRFIVYSYKYVHHDNRVSYPMCLIFSSPQGCNPQQQMMYAGSKNRLVQLGKLTKVFEIRNIDELTEDWLREKLAFFR
SIO_010081: LOC122542729
subclass of: SO_0000673
so part of: LOC122542729
location: complement(join(1745116..1745187,1750374..1750447,1753672..1753754,1755374..1755423,1757425..1757474,1758774..1758870,1763548..1763550))
location: region:1745116-1763550:-1
so has part: feature:1763548-1763550:-1:exon
so has part: feature:1758774-1758870:-1:exon
so has part: feature:1757425-1757474:-1:exon
so has part: feature:1755374-1755423:-1:exon
so has part: feature:1753672-1753754:-1:exon
so has part: feature:1750374-1750447:-1:exon
so has part: feature:1745116-1745187:-1:exon

XP_043536645.1
type: Protein
SIO_000068: ncbiprotein

position:1745116:-1
position: 1745116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1763550:-1
position: 1763550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1763548-1763550:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1758774-1758870:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1757425-1757474:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1755374-1755423:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1753672-1753754:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1750374-1750447:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1745116-1745187:-1:exon

LOC122542730
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: LOC122542730
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1772080..1863415
location: region:1772080-1863415:1
so has part: feature:1772080-1863415:1:exon
subclass of: SO_0000010

122542730
type: Gene
SIO_000068: ncbigene

position:1772080:1
position: 1772080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1863415:1
position: 1863415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1772080-1863415:1:exon

LOC122542730
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542730
product: protein Smaug homolog 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680711.1
SIO_010081: LOC122542730
subclass of: SO_0000673
so part of: LOC122542730
location: join(1772080..1772305,1787739..1788248,1814417..1814932,1826910..1827176,1835346..1835455,1836277..1836363,1838030..1838339,1840272..1840357,1843234..1843349,1847360..1847561,1850080..1850206,1852770..1852853,1855949..1863415)
location: region:1772080-1863415:1
so has part: feature:1772080-1772305:1:exon
so has part: feature:1787739-1788248:1:exon
so has part: feature:1814417-1814932:1:exon
so has part: feature:1826910-1827176:1:exon
so has part: feature:1835346-1835455:1:exon
so has part: feature:1836277-1836363:1:exon
so has part: feature:1838030-1838339:1:exon
so has part: feature:1840272-1840357:1:exon
so has part: feature:1843234-1843349:1:exon
so has part: feature:1847360-1847561:1:exon
so has part: feature:1850080-1850206:1:exon
so has part: feature:1852770-1852853:1:exon
so has part: feature:1855949-1863415:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1772080-1772305:1:exon

position:1772305:1
position: 1772305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1787739-1788248:1:exon

position:1787739:1
position: 1787739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1788248:1
position: 1788248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1814417-1814932:1:exon

position:1814417:1
position: 1814417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1814932:1
position: 1814932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1826910-1827176:1:exon

position:1826910:1
position: 1826910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1827176:1
position: 1827176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1835346-1835455:1:exon

position:1835346:1
position: 1835346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1835455:1
position: 1835455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1836277-1836363:1:exon

position:1836277:1
position: 1836277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1836363:1
position: 1836363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1838030-1838339:1:exon

position:1838030:1
position: 1838030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1838339:1
position: 1838339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1840272-1840357:1:exon

position:1840272:1
position: 1840272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1840357:1
position: 1840357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1843234-1843349:1:exon

position:1843234:1
position: 1843234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1843349:1
position: 1843349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1847360-1847561:1:exon

position:1847360:1
position: 1847360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1847561:1
position: 1847561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1850080-1850206:1:exon

position:1850080:1
position: 1850080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1850206:1
position: 1850206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1852770-1852853:1:exon

position:1852770:1
position: 1852770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1852853:1
position: 1852853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1855949-1863415:1:exon

position:1855949:1
position: 1855949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC122542730
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542730
product: protein Smaug homolog 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680712.1
SIO_010081: LOC122542730
subclass of: SO_0000673
so part of: LOC122542730
location: join(1772080..1772263,1787739..1788248,1814417..1814932,1826910..1827176,1835346..1835455,1836277..1836363,1838030..1838339,1840272..1840357,1843234..1843349,1847360..1847561,1850080..1850206,1852770..1852853,1855949..1863415)
location: region:1772080-1863415:1
so has part: feature:1772080-1772263:1:exon
so has part: feature:1787739-1788248:1:exon
so has part: feature:1814417-1814932:1:exon
so has part: feature:1826910-1827176:1:exon
so has part: feature:1835346-1835455:1:exon
so has part: feature:1836277-1836363:1:exon
so has part: feature:1838030-1838339:1:exon
so has part: feature:1840272-1840357:1:exon
so has part: feature:1843234-1843349:1:exon
so has part: feature:1847360-1847561:1:exon
so has part: feature:1850080-1850206:1:exon
so has part: feature:1852770-1852853:1:exon
so has part: feature:1855949-1863415:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1772080-1772263:1:exon

position:1772263:1
position: 1772263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1787739-1788248:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1814417-1814932:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1826910-1827176:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1835346-1835455:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1836277-1836363:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1838030-1838339:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1840272-1840357:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1843234-1843349:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1847360-1847561:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1850080-1850206:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1852770-1852853:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1855949-1863415:1:exon

LOC122542730
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542730
product: protein Smaug homolog 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680714.1
SIO_010081: LOC122542730
subclass of: SO_0000673
so part of: LOC122542730
location: join(1772795..1772813,1787739..1788248,1814417..1814932,1826910..1827176,1835346..1835455,1836277..1836363,1838030..1838339,1840272..1840357,1843234..1843349,1847360..1847561,1850080..1850206,1852770..1852853,1855949..1863415)
location: region:1772795-1863415:1
so has part: feature:1772795-1772813:1:exon
so has part: feature:1787739-1788248:1:exon
so has part: feature:1814417-1814932:1:exon
so has part: feature:1826910-1827176:1:exon
so has part: feature:1835346-1835455:1:exon
so has part: feature:1836277-1836363:1:exon
so has part: feature:1838030-1838339:1:exon
so has part: feature:1840272-1840357:1:exon
so has part: feature:1843234-1843349:1:exon
so has part: feature:1847360-1847561:1:exon
so has part: feature:1850080-1850206:1:exon
so has part: feature:1852770-1852853:1:exon
so has part: feature:1855949-1863415:1:exon

position:1772795:1
position: 1772795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1772795-1772813:1:exon

position:1772813:1
position: 1772813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1787739-1788248:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1814417-1814932:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1826910-1827176:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1835346-1835455:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1836277-1836363:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1838030-1838339:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1840272-1840357:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1843234-1843349:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1847360-1847561:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1850080-1850206:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1852770-1852853:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1855949-1863415:1:exon

LOC122542730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542730
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Smaug homolog 1
translation: MMFRDQVGVLAGWFKGWNECEQTVALLSLLKRVSRTQARFLQICLEHSLADCTDIHILEGEANDAAFISQWHQDPKEKVVLQLLSHLPLLQPGNVEAKSEYMKLLQKVLAYSIDSNLFIEESRQLLSYALIHPATSLDDRSSLALWLTHLEERISTNYSSQNVSPADSIYTGVYNQNQRQNVEDKLNEWQSRADSGMCITVPAWQDKPMTCENGHLPLHTSASVPSAINNIGSNASTVLQGQTQTNHSPLKRSVSLTPPINMTNQSAVSEWMSPDDLRTRAVYAPSDHAPLSPQSSIASSGSGGSEQTEEQGSNRNTFQEEGSGMKDVPTWLKSLRLHKYASLFSQLTYEEMMTLTEHQLESQNVTKGARHKIALSIQKLRERQGVLKSLEKDILEGGNLRNALQELQQIIITPIKAYTTPQMTPKEGHETDPNNSCNTIPGLGTDSRTTKAAAEKDSTSDGFQTQGVSTCDGESAVAPVSEGDIPGQFTRVMGKVCTQLLVSRPDEENISSYLQLLEKCLAHEAFTETQKKRLFSWKQQVFKLLRSFPRKALLEMPGVRQRSWGFSQSSSLPTAGSVVGGLGRRGQRPFQVPPRGLSANRMGLIGTSAASLGGVSPRHTLNPLTSQGRQNLWFANPGGSNSMPSQSRSSVQRTYSLPVHTSPQAILMFQQPECQVPVTEPEINTRLESLCLSMTEHALGDGVDKTSTI
SIO_010081: LOC122542730
subclass of: SO_0000673
so part of: LOC122542730
location: join(1788053..1788248,1814417..1814932,1826910..1827176,1835346..1835455,1836277..1836363,1838030..1838339,1840272..1840357,1843234..1843349,1847360..1847561,1850080..1850206,1852770..1852853,1855949..1855977)
location: region:1788053-1855977:1
so has part: feature:1788053-1788248:1:exon
so has part: feature:1814417-1814932:1:exon
so has part: feature:1826910-1827176:1:exon
so has part: feature:1835346-1835455:1:exon
so has part: feature:1836277-1836363:1:exon
so has part: feature:1838030-1838339:1:exon
so has part: feature:1840272-1840357:1:exon
so has part: feature:1843234-1843349:1:exon
so has part: feature:1847360-1847561:1:exon
so has part: feature:1850080-1850206:1:exon
so has part: feature:1852770-1852853:1:exon
so has part: feature:1855949-1855977:1:exon

XP_043536646.1
type: Protein
SIO_000068: ncbiprotein

position:1788053:1
position: 1788053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1855977:1
position: 1855977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1788053-1788248:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1814417-1814932:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1826910-1827176:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1835346-1835455:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1836277-1836363:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1838030-1838339:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1840272-1840357:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1843234-1843349:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1847360-1847561:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1850080-1850206:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1852770-1852853:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1855949-1855977:1:exon

LOC122542730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542730
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Smaug homolog 1
translation: MMFRDQVGVLAGWFKGWNECEQTVALLSLLKRVSRTQARFLQICLEHSLADCTDIHILEGEANDAAFISQWHQDPKEKVVLQLLSHLPLLQPGNVEAKSEYMKLLQKVLAYSIDSNLFIEESRQLLSYALIHPATSLDDRSSLALWLTHLEERISTNYSSQNVSPADSIYTGVYNQNQRQNVEDKLNEWQSRADSGMCITVPAWQDKPMTCENGHLPLHTSASVPSAINNIGSNASTVLQGQTQTNHSPLKRSVSLTPPINMTNQSAVSEWMSPDDLRTRAVYAPSDHAPLSPQSSIASSGSGGSEQTEEQGSNRNTFQEEGSGMKDVPTWLKSLRLHKYASLFSQLTYEEMMTLTEHQLESQNVTKGARHKIALSIQKLRERQGVLKSLEKDILEGGNLRNALQELQQIIITPIKAYTTPQMTPKEGHETDPNNSCNTIPGLGTDSRTTKAAAEKDSTSDGFQTQGVSTCDGESAVAPVSEGDIPGQFTRVMGKVCTQLLVSRPDEENISSYLQLLEKCLAHEAFTETQKKRLFSWKQQVFKLLRSFPRKALLEMPGVRQRSWGFSQSSSLPTAGSVVGGLGRRGQRPFQVPPRGLSANRMGLIGTSAASLGGVSPRHTLNPLTSQGRQNLWFANPGGSNSMPSQSRSSVQRTYSLPVHTSPQAILMFQQPECQVPVTEPEINTRLESLCLSMTEHALGDGVDKTSTI
SIO_010081: LOC122542730
subclass of: SO_0000673
so part of: LOC122542730
location: join(1788053..1788248,1814417..1814932,1826910..1827176,1835346..1835455,1836277..1836363,1838030..1838339,1840272..1840357,1843234..1843349,1847360..1847561,1850080..1850206,1852770..1852853,1855949..1855977)
location: region:1788053-1855977:1
so has part: feature:1788053-1788248:1:exon
so has part: feature:1814417-1814932:1:exon
so has part: feature:1826910-1827176:1:exon
so has part: feature:1835346-1835455:1:exon
so has part: feature:1836277-1836363:1:exon
so has part: feature:1838030-1838339:1:exon
so has part: feature:1840272-1840357:1:exon
so has part: feature:1843234-1843349:1:exon
so has part: feature:1847360-1847561:1:exon
so has part: feature:1850080-1850206:1:exon
so has part: feature:1852770-1852853:1:exon
so has part: feature:1855949-1855977:1:exon

XP_043536647.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1788053-1788248:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1814417-1814932:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1826910-1827176:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1835346-1835455:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1836277-1836363:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1838030-1838339:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1840272-1840357:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1843234-1843349:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1847360-1847561:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1850080-1850206:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1852770-1852853:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1855949-1855977:1:exon

LOC122542730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542730
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Smaug homolog 1
translation: MMFRDQVGVLAGWFKGWNECEQTVALLSLLKRVSRTQARFLQICLEHSLADCTDIHILEGEANDAAFISQWHQDPKEKVVLQLLSHLPLLQPGNVEAKSEYMKLLQKVLAYSIDSNLFIEESRQLLSYALIHPATSLDDRSSLALWLTHLEERISTNYSSQNVSPADSIYTGVYNQNQRQNVEDKLNEWQSRADSGMCITVPAWQDKPMTCENGHLPLHTSASVPSAINNIGSNASTVLQGQTQTNHSPLKRSVSLTPPINMTNQSAVSEWMSPDDLRTRAVYAPSDHAPLSPQSSIASSGSGGSEQTEEQGSNRNTFQEEGSGMKDVPTWLKSLRLHKYASLFSQLTYEEMMTLTEHQLESQNVTKGARHKIALSIQKLRERQGVLKSLEKDILEGGNLRNALQELQQIIITPIKAYTTPQMTPKEGHETDPNNSCNTIPGLGTDSRTTKAAAEKDSTSDGFQTQGVSTCDGESAVAPVSEGDIPGQFTRVMGKVCTQLLVSRPDEENISSYLQLLEKCLAHEAFTETQKKRLFSWKQQVFKLLRSFPRKALLEMPGVRQRSWGFSQSSSLPTAGSVVGGLGRRGQRPFQVPPRGLSANRMGLIGTSAASLGGVSPRHTLNPLTSQGRQNLWFANPGGSNSMPSQSRSSVQRTYSLPVHTSPQAILMFQQPECQVPVTEPEINTRLESLCLSMTEHALGDGVDKTSTI
SIO_010081: LOC122542730
subclass of: SO_0000673
so part of: LOC122542730
location: join(1788053..1788248,1814417..1814932,1826910..1827176,1835346..1835455,1836277..1836363,1838030..1838339,1840272..1840357,1843234..1843349,1847360..1847561,1850080..1850206,1852770..1852853,1855949..1855977)
location: region:1788053-1855977:1
so has part: feature:1788053-1788248:1:exon
so has part: feature:1814417-1814932:1:exon
so has part: feature:1826910-1827176:1:exon
so has part: feature:1835346-1835455:1:exon
so has part: feature:1836277-1836363:1:exon
so has part: feature:1838030-1838339:1:exon
so has part: feature:1840272-1840357:1:exon
so has part: feature:1843234-1843349:1:exon
so has part: feature:1847360-1847561:1:exon
so has part: feature:1850080-1850206:1:exon
so has part: feature:1852770-1852853:1:exon
so has part: feature:1855949-1855977:1:exon

XP_043536649.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1788053-1788248:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1814417-1814932:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1826910-1827176:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1835346-1835455:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1836277-1836363:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1838030-1838339:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1840272-1840357:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1843234-1843349:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1847360-1847561:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1850080-1850206:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1852770-1852853:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1855949-1855977:1:exon

socs9
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: socs9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1876955..1881456
location: region:1876955-1881456:1
so has part: feature:1876955-1881456:1:exon
subclass of: SO_0000010

122542731
type: Gene
SIO_000068: ncbigene

position:1876955:1
position: 1876955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1881456:1
position: 1881456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1876955-1881456:1:exon

socs9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: socs9
product: suppressor of cytokine signaling 9
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680715.1
SIO_010081: socs9
subclass of: SO_0000673
so part of: socs9
location: join(1876955..1877094,1879113..1881456)
location: region:1876955-1881456:1
so has part: feature:1876955-1877094:1:exon
so has part: feature:1879113-1881456:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1876955-1877094:1:exon

position:1877094:1
position: 1877094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1879113-1881456:1:exon

position:1879113:1
position: 1879113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

socs9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: socs9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppressor of cytokine signaling 9
translation: MSESQENDKPEKDKRAVRPKVRRGDPDDQRGSRSKKKNRNSHKSDPSARASDCGPQEEDVRSHSGRKPERQSPDRTREDSLDLGACKLHSRSLRQRIQDVVGQCFPIKSHSLHSAILSSSKRKIHISELMLDKCPFPAGTDLAQKWYLIKQHTAPVSQSLPMLDTASSGGTPVEDEDDRLRERRRISIEQGVEPPPHAQIHTFEVTAQINPLYKLGPKLAPGMNELAGDDRATLQVQESASVEELPPPQLPPEQVEIKDGYRAHTQIDYIHCLVPDLLELTTFPCYWGVMDRYQAEALLEGKPEGAFLLRDSAQEDYLFSVSFRRYSRSLHARIEQWNHNFSFDVHDPSVFHAPTVTGLLEHYKDPNSCMFFEPLLSNPINRTFPFSLQHICRAAISSCSTYDGIDLLPIPNTLKEYLKEYHYKQKVRVRRLDTR
SIO_010081: socs9
subclass of: SO_0000673
so part of: socs9
location: 1879331..1880638
location: region:1879331-1880638:1
so has part: feature:1879331-1880638:1:exon

XP_043536650.1
type: Protein
SIO_000068: ncbiprotein

position:1879331:1
position: 1879331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1880638:1
position: 1880638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1879331-1880638:1:exon

mrps12
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: mrps12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1891334..1902299)
location: region:1891334-1902299:-1
so has part: feature:1891334-1902299:-1:exon
subclass of: SO_0000010

122542733
type: Gene
SIO_000068: ncbigene

position:1891334:-1
position: 1891334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1902299:-1
position: 1902299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1891334-1902299:-1:exon

mrps12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: mrps12
product: mitochondrial ribosomal protein S12, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680718.1
SIO_010081: mrps12
subclass of: SO_0000673
so part of: mrps12
location: complement(join(1891334..1891835,1899384..1899477,1902220..1902299))
location: region:1891334-1902299:-1
so has part: feature:1902220-1902299:-1:exon
so has part: feature:1899384-1899477:-1:exon
so has part: feature:1891334-1891835:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1902220-1902299:-1:exon

position:1902220:-1
position: 1902220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1899384-1899477:-1:exon

position:1899384:-1
position: 1899384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1899477:-1
position: 1899477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1891334-1891835:-1:exon

position:1891835:-1
position: 1891835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

mrps12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: mrps12
product: mitochondrial ribosomal protein S12, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680719.1
SIO_010081: mrps12
subclass of: SO_0000673
so part of: mrps12
location: complement(join(1891334..1891835,1899384..1899477,1902203..1902296))
location: region:1891334-1902296:-1
so has part: feature:1902203-1902296:-1:exon
so has part: feature:1899384-1899477:-1:exon
so has part: feature:1891334-1891835:-1:exon

position:1902296:-1
position: 1902296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1902203-1902296:-1:exon

position:1902203:-1
position: 1902203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1899384-1899477:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1891334-1891835:-1:exon

mrps12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: mrps12
product: mitochondrial ribosomal protein S12, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680720.1
SIO_010081: mrps12
subclass of: SO_0000673
so part of: mrps12
location: complement(join(1891334..1891835,1899384..1899477,1902095..1902186))
location: region:1891334-1902186:-1
so has part: feature:1902095-1902186:-1:exon
so has part: feature:1899384-1899477:-1:exon
so has part: feature:1891334-1891835:-1:exon

position:1902186:-1
position: 1902186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1902095-1902186:-1:exon

position:1902095:-1
position: 1902095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1899384-1899477:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1891334-1891835:-1:exon

mrps12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: mrps12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 28S ribosomal protein S12, mitochondrial-like
translation: MFSTGVMRSWMSSLTLGAARLISLSPASFLQRAFPAGVTLPTLACQHNRCTMATLNQMHKMGKPKRAPRKLGPTFGRPQLKGVVLKTMIRKPKKPNSANRKCARVRLSNGKEVIVFIPGEGHNLQEHNIVLVEGGRTQDLPGVKLKVVRGKYDCAHVQKKK
SIO_010081: mrps12
subclass of: SO_0000673
so part of: mrps12
location: complement(join(1891399..1891835,1899384..1899432))
location: region:1891399-1899432:-1
so has part: feature:1899384-1899432:-1:exon
so has part: feature:1891399-1891835:-1:exon

XP_043536653.1
type: Protein
SIO_000068: ncbiprotein

position:1891399:-1
position: 1891399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1899432:-1
position: 1899432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1899384-1899432:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1891399-1891835:-1:exon

mrps12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: mrps12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 28S ribosomal protein S12, mitochondrial-like
translation: MFSTGVMRSWMSSLTLGAARLISLSPASFLQRAFPAGVTLPTLACQHNRCTMATLNQMHKMGKPKRAPRKLGPTFGRPQLKGVVLKTMIRKPKKPNSANRKCARVRLSNGKEVIVFIPGEGHNLQEHNIVLVEGGRTQDLPGVKLKVVRGKYDCAHVQKKK
SIO_010081: mrps12
subclass of: SO_0000673
so part of: mrps12
location: complement(join(1891399..1891835,1899384..1899432))
location: region:1891399-1899432:-1
so has part: feature:1899384-1899432:-1:exon
so has part: feature:1891399-1891835:-1:exon

XP_043536654.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1899384-1899432:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1891399-1891835:-1:exon

mrps12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: mrps12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 28S ribosomal protein S12, mitochondrial-like
translation: MFSTGVMRSWMSSLTLGAARLISLSPASFLQRAFPAGVTLPTLACQHNRCTMATLNQMHKMGKPKRAPRKLGPTFGRPQLKGVVLKTMIRKPKKPNSANRKCARVRLSNGKEVIVFIPGEGHNLQEHNIVLVEGGRTQDLPGVKLKVVRGKYDCAHVQKKK
SIO_010081: mrps12
subclass of: SO_0000673
so part of: mrps12
location: complement(join(1891399..1891835,1899384..1899432))
location: region:1891399-1899432:-1
so has part: feature:1899384-1899432:-1:exon
so has part: feature:1891399-1891835:-1:exon

XP_043536655.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1899384-1899432:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1891399-1891835:-1:exon

LOC122542732
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: LOC122542732
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1902352..1909320
location: region:1902352-1909320:1
so has part: feature:1902352-1909320:1:exon
subclass of: SO_0000010

122542732
type: Gene
SIO_000068: ncbigene

position:1902352:1
position: 1902352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1909320:1
position: 1909320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1902352-1909320:1:exon

LOC122542732
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542732
product: E3 SUMO-protein ligase ZBED1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_043680717.1
SIO_010081: LOC122542732
subclass of: SO_0000673
so part of: LOC122542732
location: join(1902352..1902374,1902749..1903053,1903689..1903827,1905275..1909320)
location: region:1902352-1909320:1
so has part: feature:1902352-1902374:1:exon
so has part: feature:1902749-1903053:1:exon
so has part: feature:1903689-1903827:1:exon
so has part: feature:1905275-1909320:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1902352-1902374:1:exon

position:1902374:1
position: 1902374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1902749-1903053:1:exon

position:1902749:1
position: 1902749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1903053:1
position: 1903053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1903689-1903827:1:exon

position:1903689:1
position: 1903689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1903827:1
position: 1903827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1905275-1909320:1:exon

position:1905275:1
position: 1905275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC122542732
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542732
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 SUMO-protein ligase ZBED1-like isoform X2
translation: MGEVRPALMWSHRCSRMAHASDVWKYVTRRDDKTVVCNICRKELVTSGSATVLRLHLERNHHVHFTEEADHNKLQGEPRTERIPGILSTKDRVPKITQLIGIDNPATLTTQSSSSRISEMLRECAAQLETEEDQEIYPFAGIGESCTALAEDELSMVLRSYHLARDGSVGSRRRKETELNFTHASPVSCQEKSQTWDFFKKLNERCVECSLCRKQLCYHNSATSLREHLRRKHNLSELDLRQSQDEGSSSSESMGQEPEVKKNKPVSISELVLHDAKACPEKREEVISNLILGMVFRDLQPISVVNNEGFKRLLGFLEPSYKIPSSMHLTASLRHKYALAKLQLEHYLHSVPSLTLSTDTWTSQGKQTYLTVVGHFIDCRWRLARCVLKTIPQYNPAPDYIGELLYSIISEFGVSCKTVNSVVHDSAGSLMSSSRLLQERFGWSSLCCAGRMLQLSIKLGLQVEQVQHTLSVARRIVNHFVHSARANVELSTKLAEMNKERLVLVMDTATRWSSTFDMCERLLELRWAVSMVLEEDRTGHMTVQNLSDHQWKLLQDLLPVLKTLKVASSFLSEEHNASVSSLFPCLHGVMTALMQHHGDPGCIVRAVSTKIRTEIAKRWRLPDDDEMMDSPAIVASFLDPRFKDLRFLSADTRDKVHNKVKNMLSSAVTSSRSRSSSSSSDEHSVSDHQQGSKQRSRKAGRRPSQCEYDLLFGEDPIERMPEIHQQLESYLAEPLRKRNTNPFDWWKNNEHRFPAVANLAKQYLAIPATSVSATRAFFCSSSVPDQTRSALLPDDIDQILFLHKNFDYIESLKRYRQ
SIO_010081: LOC122542732
subclass of: SO_0000673
so part of: LOC122542732
location: join(1902365..1902374,1902749..1903053,1903689..1903827,1905275..1907274)
location: region:1902365-1907274:1
so has part: feature:1902365-1902374:1:exon
so has part: feature:1902749-1903053:1:exon
so has part: feature:1903689-1903827:1:exon
so has part: feature:1905275-1907274:1:exon

XP_043536652.1
type: Protein
SIO_000068: ncbiprotein

position:1902365:1
position: 1902365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1907274:1
position: 1907274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1902365-1902374:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1902749-1903053:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1903689-1903827:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1905275-1907274:1:exon

LOC122542732
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542732
product: E3 SUMO-protein ligase ZBED1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_043680716.1
SIO_010081: LOC122542732
subclass of: SO_0000673
so part of: LOC122542732
location: join(1902535..1903053,1903689..1903827,1905275..1909320)
location: region:1902535-1909320:1
so has part: feature:1902535-1903053:1:exon
so has part: feature:1903689-1903827:1:exon
so has part: feature:1905275-1909320:1:exon

position:1902535:1
position: 1902535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1902535-1903053:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1903689-1903827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1905275-1909320:1:exon

LOC122542732
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542732
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 SUMO-protein ligase ZBED1-like isoform X1
translation: MSLLCLIAVRPALMWSHRCSRMAHASDVWKYVTRRDDKTVVCNICRKELVTSGSATVLRLHLERNHHVHFTEEADHNKLQGEPRTERIPGILSTKDRVPKITQLIGIDNPATLTTQSSSSRISEMLRECAAQLETEEDQEIYPFAGIGESCTALAEDELSMVLRSYHLARDGSVGSRRRKETELNFTHASPVSCQEKSQTWDFFKKLNERCVECSLCRKQLCYHNSATSLREHLRRKHNLSELDLRQSQDEGSSSSESMGQEPEVKKNKPVSISELVLHDAKACPEKREEVISNLILGMVFRDLQPISVVNNEGFKRLLGFLEPSYKIPSSMHLTASLRHKYALAKLQLEHYLHSVPSLTLSTDTWTSQGKQTYLTVVGHFIDCRWRLARCVLKTIPQYNPAPDYIGELLYSIISEFGVSCKTVNSVVHDSAGSLMSSSRLLQERFGWSSLCCAGRMLQLSIKLGLQVEQVQHTLSVARRIVNHFVHSARANVELSTKLAEMNKERLVLVMDTATRWSSTFDMCERLLELRWAVSMVLEEDRTGHMTVQNLSDHQWKLLQDLLPVLKTLKVASSFLSEEHNASVSSLFPCLHGVMTALMQHHGDPGCIVRAVSTKIRTEIAKRWRLPDDDEMMDSPAIVASFLDPRFKDLRFLSADTRDKVHNKVKNMLSSAVTSSRSRSSSSSSDEHSVSDHQQGSKQRSRKAGRRPSQCEYDLLFGEDPIERMPEIHQQLESYLAEPLRKRNTNPFDWWKNNEHRFPAVANLAKQYLAIPATSVSATRAFFCSSSVPDQTRSALLPDDIDQILFLHKNFDYIESLKRYRQ
SIO_010081: LOC122542732
subclass of: SO_0000673
so part of: LOC122542732
location: join(1902724..1903053,1903689..1903827,1905275..1907274)
location: region:1902724-1907274:1
so has part: feature:1902724-1903053:1:exon
so has part: feature:1903689-1903827:1:exon
so has part: feature:1905275-1907274:1:exon

XP_043536651.1
type: Protein
SIO_000068: ncbiprotein

position:1902724:1
position: 1902724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1902724-1903053:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1903689-1903827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1905275-1907274:1:exon

erh
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: erh
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1919498..1930441
location: region:1919498-1930441:1
so has part: feature:1919498-1930441:1:exon
subclass of: SO_0000010

122542735
type: Gene
SIO_000068: ncbigene

position:1919498:1
position: 1919498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1930441:1
position: 1930441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1919498-1930441:1:exon

erh
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: erh
product: ERH mRNA splicing and mitosis factor
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680726.1
SIO_010081: erh
subclass of: SO_0000673
so part of: erh
location: join(1919498..1919649,1925360..1925447,1926776..1926896,1929718..1930441)
location: region:1919498-1930441:1
so has part: feature:1919498-1919649:1:exon
so has part: feature:1925360-1925447:1:exon
so has part: feature:1926776-1926896:1:exon
so has part: feature:1929718-1930441:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1919498-1919649:1:exon

position:1919649:1
position: 1919649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1925360-1925447:1:exon

position:1925360:1
position: 1925360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1925447:1
position: 1925447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1926776-1926896:1:exon

position:1926776:1
position: 1926776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1926896:1
position: 1926896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1929718-1930441:1:exon

position:1929718:1
position: 1929718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

erh
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: erh
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: enhancer of rudimentary homolog
translation: MSHTILLVQPTKRPEGRTYADYESVNECMEGVCKMFEEHLKRMNPNSPSITYDISQLFDFIDDLADLSCLVYRADTQTYQPYNKDWLKEKIYILLRRQAQQAGK
SIO_010081: erh
subclass of: SO_0000673
so part of: erh
location: join(1919647..1919649,1925360..1925447,1926776..1926896,1929718..1929820)
location: region:1919647-1929820:1
so has part: feature:1919647-1919649:1:exon
so has part: feature:1925360-1925447:1:exon
so has part: feature:1926776-1926896:1:exon
so has part: feature:1929718-1929820:1:exon

XP_043536661.1
type: Protein
SIO_000068: ncbiprotein

position:1919647:1
position: 1919647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1929820:1
position: 1929820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1919647-1919649:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1925360-1925447:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1926776-1926896:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1929718-1929820:1:exon

LOC122542734
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: LOC122542734
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1934014..1993953)
location: region:1934014-1993953:-1
so has part: feature:1934014-1993953:-1:exon
subclass of: SO_0000010

122542734
type: Gene
SIO_000068: ncbigene

position:1934014:-1
position: 1934014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1993953:-1
position: 1993953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1934014-1993953:-1:exon

LOC122542734
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542734
product: zinc finger protein 541-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_043680723.1
SIO_010081: LOC122542734
subclass of: SO_0000673
so part of: LOC122542734
location: complement(join(1934014..1934709,1935999..1936177,1937960..1938139,1942134..1942222,1944839..1944914,1951589..1951692,1952890..1953032,1957946..1958009,1959860..1960205,1960787..1961047,1962130..1962304,1962937..1963001,1964802..1966701,1968771..1968898,1969193..1969317,1972378..1972791,1993590..1993953))
location: region:1934014-1993953:-1
so has part: feature:1993590-1993953:-1:exon
so has part: feature:1972378-1972791:-1:exon
so has part: feature:1969193-1969317:-1:exon
so has part: feature:1968771-1968898:-1:exon
so has part: feature:1964802-1966701:-1:exon
so has part: feature:1962937-1963001:-1:exon
so has part: feature:1962130-1962304:-1:exon
so has part: feature:1960787-1961047:-1:exon
so has part: feature:1959860-1960205:-1:exon
so has part: feature:1957946-1958009:-1:exon
so has part: feature:1952890-1953032:-1:exon
so has part: feature:1951589-1951692:-1:exon
so has part: feature:1944839-1944914:-1:exon
so has part: feature:1942134-1942222:-1:exon
so has part: feature:1937960-1938139:-1:exon
so has part: feature:1935999-1936177:-1:exon
so has part: feature:1934014-1934709:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1993590-1993953:-1:exon

position:1993590:-1
position: 1993590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1972378-1972791:-1:exon

position:1972378:-1
position: 1972378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1972791:-1
position: 1972791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1969193-1969317:-1:exon

position:1969193:-1
position: 1969193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1969317:-1
position: 1969317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1968771-1968898:-1:exon

position:1968771:-1
position: 1968771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1968898:-1
position: 1968898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1964802-1966701:-1:exon

position:1964802:-1
position: 1964802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1966701:-1
position: 1966701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1962937-1963001:-1:exon

position:1962937:-1
position: 1962937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1963001:-1
position: 1963001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1962130-1962304:-1:exon

position:1962130:-1
position: 1962130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1962304:-1
position: 1962304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1960787-1961047:-1:exon

position:1960787:-1
position: 1960787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1961047:-1
position: 1961047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1959860-1960205:-1:exon

position:1959860:-1
position: 1959860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1960205:-1
position: 1960205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1957946-1958009:-1:exon

position:1957946:-1
position: 1957946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1958009:-1
position: 1958009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1952890-1953032:-1:exon

position:1952890:-1
position: 1952890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1953032:-1
position: 1953032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1951589-1951692:-1:exon

position:1951589:-1
position: 1951589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1951692:-1
position: 1951692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1944839-1944914:-1:exon

position:1944839:-1
position: 1944839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1944914:-1
position: 1944914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1942134-1942222:-1:exon

position:1942134:-1
position: 1942134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1942222:-1
position: 1942222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1937960-1938139:-1:exon

position:1937960:-1
position: 1937960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1938139:-1
position: 1938139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1935999-1936177:-1:exon

position:1935999:-1
position: 1935999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1936177:-1
position: 1936177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1934014-1934709:-1:exon

position:1934709:-1
position: 1934709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC122542734
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542734
product: zinc finger protein 541-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_043680725.1
SIO_010081: LOC122542734
subclass of: SO_0000673
so part of: LOC122542734
location: complement(join(1934014..1934709,1935999..1936177,1937960..1938139,1942134..1942222,1944839..1944914,1951589..1951692,1952890..1953032,1957946..1958009,1959860..1960205,1960787..1961047,1962130..1962304,1962937..1963001,1964802..1966701,1968771..1968898,1969193..1969317,1972615..1972791,1993477..1993953))
location: region:1934014-1993953:-1
so has part: feature:1993477-1993953:-1:exon
so has part: feature:1972615-1972791:-1:exon
so has part: feature:1969193-1969317:-1:exon
so has part: feature:1968771-1968898:-1:exon
so has part: feature:1964802-1966701:-1:exon
so has part: feature:1962937-1963001:-1:exon
so has part: feature:1962130-1962304:-1:exon
so has part: feature:1960787-1961047:-1:exon
so has part: feature:1959860-1960205:-1:exon
so has part: feature:1957946-1958009:-1:exon
so has part: feature:1952890-1953032:-1:exon
so has part: feature:1951589-1951692:-1:exon
so has part: feature:1944839-1944914:-1:exon
so has part: feature:1942134-1942222:-1:exon
so has part: feature:1937960-1938139:-1:exon
so has part: feature:1935999-1936177:-1:exon
so has part: feature:1934014-1934709:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1993477-1993953:-1:exon

position:1993477:-1
position: 1993477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1972615-1972791:-1:exon

position:1972615:-1
position: 1972615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1969193-1969317:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1968771-1968898:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1964802-1966701:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1962937-1963001:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1962130-1962304:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1960787-1961047:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1959860-1960205:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1957946-1958009:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1952890-1953032:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1951589-1951692:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1944839-1944914:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1942134-1942222:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1937960-1938139:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1935999-1936177:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1934014-1934709:-1:exon

LOC122542734
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542734
product: zinc finger protein 541-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_043680724.1
SIO_010081: LOC122542734
subclass of: SO_0000673
so part of: LOC122542734
location: complement(join(1934014..1934709,1935999..1936177,1937987..1938139,1942134..1942222,1944839..1944914,1951589..1951692,1952890..1953032,1957946..1958009,1959860..1960205,1960787..1961047,1962130..1962304,1962937..1963001,1964802..1966701,1968771..1968898,1969193..1969317,1972378..1972791,1993477..1993953))
location: region:1934014-1993953:-1
so has part: feature:1993477-1993953:-1:exon
so has part: feature:1972378-1972791:-1:exon
so has part: feature:1969193-1969317:-1:exon
so has part: feature:1968771-1968898:-1:exon
so has part: feature:1964802-1966701:-1:exon
so has part: feature:1962937-1963001:-1:exon
so has part: feature:1962130-1962304:-1:exon
so has part: feature:1960787-1961047:-1:exon
so has part: feature:1959860-1960205:-1:exon
so has part: feature:1957946-1958009:-1:exon
so has part: feature:1952890-1953032:-1:exon
so has part: feature:1951589-1951692:-1:exon
so has part: feature:1944839-1944914:-1:exon
so has part: feature:1942134-1942222:-1:exon
so has part: feature:1937987-1938139:-1:exon
so has part: feature:1935999-1936177:-1:exon
so has part: feature:1934014-1934709:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1993477-1993953:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1972378-1972791:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1969193-1969317:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1968771-1968898:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1964802-1966701:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1962937-1963001:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1962130-1962304:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1960787-1961047:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1959860-1960205:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1957946-1958009:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1952890-1953032:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1951589-1951692:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1944839-1944914:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1942134-1942222:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1937987-1938139:-1:exon

position:1937987:-1
position: 1937987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1935999-1936177:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1934014-1934709:-1:exon

LOC122542734
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542734
product: zinc finger protein 541-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_043680721.1
SIO_010081: LOC122542734
subclass of: SO_0000673
so part of: LOC122542734
location: complement(join(1934014..1934709,1935999..1936177,1937960..1938139,1942134..1942222,1944839..1944914,1951589..1951692,1952890..1953032,1957946..1958009,1959860..1960205,1960787..1961047,1962130..1962304,1962937..1963001,1964802..1966701,1968771..1968898,1969193..1969317,1972378..1972791,1993477..1993953))
location: region:1934014-1993953:-1
so has part: feature:1993477-1993953:-1:exon
so has part: feature:1972378-1972791:-1:exon
so has part: feature:1969193-1969317:-1:exon
so has part: feature:1968771-1968898:-1:exon
so has part: feature:1964802-1966701:-1:exon
so has part: feature:1962937-1963001:-1:exon
so has part: feature:1962130-1962304:-1:exon
so has part: feature:1960787-1961047:-1:exon
so has part: feature:1959860-1960205:-1:exon
so has part: feature:1957946-1958009:-1:exon
so has part: feature:1952890-1953032:-1:exon
so has part: feature:1951589-1951692:-1:exon
so has part: feature:1944839-1944914:-1:exon
so has part: feature:1942134-1942222:-1:exon
so has part: feature:1937960-1938139:-1:exon
so has part: feature:1935999-1936177:-1:exon
so has part: feature:1934014-1934709:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1993477-1993953:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1972378-1972791:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1969193-1969317:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1968771-1968898:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1964802-1966701:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1962937-1963001:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1962130-1962304:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1960787-1961047:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1959860-1960205:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1957946-1958009:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1952890-1953032:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1951589-1951692:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1944839-1944914:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1942134-1942222:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1937960-1938139:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1935999-1936177:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1934014-1934709:-1:exon

LOC122542734
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542734
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 541-like isoform X3
translation: MDCYSFTDESSLQTEMHLPLLSDSISPVPQKNSPEKSGGKSEGKYGGLQKRRRLSTRHSPQQAFQECSQCGKSFSSASALSKHYLTHSHERRHVCRICNKAFKRQDHLSGHLLTHQKNKPYVCMEHGCDKSYCDSRSLRRHYEVQHGLYCQREPFADNSSKEVDSTEGVLYPQTGQTQTLQCEVGVAQRPTTQVESLSQRSCLPNRDMLRPLTSSVSQKIPCETGATGSKITLHYPTQTHATASVLTSPNICLSERSSTVRQAKFGIMQREHSSSGLNCNITDPYSRVNPSHFSVADPSVSCVENLDSYLLDSMIPGRPSQPAQYTLESSRPASWPQDVNTNHTLSRTETGSTRQQPSQDLVWTNNLATYSGSKGSYSYIVPNSQPPEEVSATFSSGALHKLDSFAQAFTRQNLDIQSNSSVAKNQSENSSMSEFDACGNVFRQLLSYKTNLNQWQAYPEQKREILQEQYSLHQQHQQQIATSLFTQVYMGDQEASPMQNQDQFQNHMLHLISDTQYNLSQSQNSVSQSQVLVTQSQHVLAQKIPSQIQNNGTQSHHPSELLQDFQHSLRQETTSPFLQFQATKQCQLSKNILSCYPQETECTDQQTETGLQPVSRGISECHKKSKKSPFKGQCPPQSMCEEVVVQNQLQSQSEQLEGWSLPPCSNKRGRISNKDVCVKHYNIAGKSSKSVSISRKERQKLDPNCTAPPSQVAMNSFPVQNSLTRSMEDCLQKPSFYANVQDEDIYSLSSIPQEADGSSTVLCRDLVSSSTSHNLDENEENFRCERCQGVFHFLKGLNCHTCPQEGMGKQLSLEDGVKAQKVTDNGIEKMEHGGLFFQYLEDKLSALLLKKPLEENVAVPLVIPVSVPVKSKKDGTSVKSETSPVTPRKSVTTKLTDLLVSSNDSSAQVTETGKQANVNCRGNSKKQRKKRSRPDPLFIPSPASNQTGVLPGMVLYQSHMRSPVCLADHLLEKNFQPPPYTPPPMLSPIRHGSGLYFNRICSLSGSKASHNTYPPKGILASVVDGVDGICGISVVKDDSIVTIEPHINIGTRFQAEIPLLQDKSLLDDSVHQADLVWKPWDDIETNKITQMRVTDLLNLACSSVLPGGGTNLELALHCLHDTRGDILAALDMLLMKGVRRDPCHPLGDYHYTGTEKWTTAEKRLFNRAICLNNKDFFLMQKMIKHKTVAQCVEYYYTWKKQLKFEWKRTHLLEEDEIKPETESPADGKEIKKLVRNAAIYAQSFSESTSIPSQTSVSREKLKKKIVRAKPNPSPSVHCQTGVQDKNEKKFTVGNFPCKECTKVFDKVKSRNAHMKCHRQQEEQERQAEMKRSRIRVKAEPKEEPEETVLVFTSNNMSNITTS
SIO_010081: LOC122542734
subclass of: SO_0000673
so part of: LOC122542734
location: complement(join(1934526..1934709,1935999..1936177,1937960..1938139,1942134..1942222,1944839..1944914,1951589..1951692,1952890..1953032,1957946..1958009,1959860..1960205,1960787..1961047,1962130..1962304,1962937..1963001,1964802..1966701,1968771..1968898,1969193..1969317,1972615..1972684))
location: region:1934526-1972684:-1
so has part: feature:1972615-1972684:-1:exon
so has part: feature:1969193-1969317:-1:exon
so has part: feature:1968771-1968898:-1:exon
so has part: feature:1964802-1966701:-1:exon
so has part: feature:1962937-1963001:-1:exon
so has part: feature:1962130-1962304:-1:exon
so has part: feature:1960787-1961047:-1:exon
so has part: feature:1959860-1960205:-1:exon
so has part: feature:1957946-1958009:-1:exon
so has part: feature:1952890-1953032:-1:exon
so has part: feature:1951589-1951692:-1:exon
so has part: feature:1944839-1944914:-1:exon
so has part: feature:1942134-1942222:-1:exon
so has part: feature:1937960-1938139:-1:exon
so has part: feature:1935999-1936177:-1:exon
so has part: feature:1934526-1934709:-1:exon

XP_043536660.1
type: Protein
SIO_000068: ncbiprotein

position:1934526:-1
position: 1934526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1972684:-1
position: 1972684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1972615-1972684:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1969193-1969317:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1968771-1968898:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1964802-1966701:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1962937-1963001:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1962130-1962304:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1960787-1961047:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1959860-1960205:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1957946-1958009:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1952890-1953032:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1951589-1951692:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1944839-1944914:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1942134-1942222:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1937960-1938139:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1935999-1936177:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1934526-1934709:-1:exon

LOC122542734
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542734
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 541-like isoform X2
translation: MDCYSFTDESSLQTEMHLPLLSDSELPIASNIQRQEFIPDPDDIIYAGMTSIELDYNLETAEIPGDPFADNVDLSLYTVDKGCDSPKIPSDSTDTDSPPVLLGISPVPQKNSPEKSGGKSEGKYGGLQKRRRLSTRHSPQQAFQECSQCGKSFSSASALSKHYLTHSHERRHVCRICNKAFKRQDHLSGHLLTHQKNKPYVCMEHGCDKSYCDSRSLRRHYEVQHGLYCQREPFADNSSKEVDSTEGVLYPQTGQTQTLQCEVGVAQRPTTQVESLSQRSCLPNRDMLRPLTSSVSQKIPCETGATGSKITLHYPTQTHATASVLTSPNICLSERSSTVRQAKFGIMQREHSSSGLNCNITDPYSRVNPSHFSVADPSVSCVENLDSYLLDSMIPGRPSQPAQYTLESSRPASWPQDVNTNHTLSRTETGSTRQQPSQDLVWTNNLATYSGSKGSYSYIVPNSQPPEEVSATFSSGALHKLDSFAQAFTRQNLDIQSNSSVAKNQSENSSMSEFDACGNVFRQLLSYKTNLNQWQAYPEQKREILQEQYSLHQQHQQQIATSLFTQVYMGDQEASPMQNQDQFQNHMLHLISDTQYNLSQSQNSVSQSQVLVTQSQHVLAQKIPSQIQNNGTQSHHPSELLQDFQHSLRQETTSPFLQFQATKQCQLSKNILSCYPQETECTDQQTETGLQPVSRGISECHKKSKKSPFKGQCPPQSMCEEVVVQNQLQSQSEQLEGWSLPPCSNKRGRISNKDVCVKHYNIAGKSSKSVSISRKERQKLDPNCTAPPSQVAMNSFPVQNSLTRSMEDCLQKPSFYANVQDEDIYSLSSIPQEADGSSTVLCRDLVSSSTSHNLDENEENFRCERCQGVFHFLKGLNCHTCPQEGMGKQLSLEDGVKAQKVTDNGIEKMEHGGLFFQYLEDKLSALLLKKPLEENVAVPLVIPVSVPVKSKKDGTSVKSETSPVTPRKSVTTKLTDLLVSSNDSSAQVTETGKQANVNCRGNSKKQRKKRSRPDPLFIPSPASNQTGVLPGMVLYQSHMRSPVCLADHLLEKNFQPPPYTPPPMLSPIRHGSGLYFNRICSLSGSKASHNTYPPKGILASVVDGVDGICGISVVKDDSIVTIEPHINIGTRFQAEIPLLQDKSLLDDSVHQADLVWKPWDDIETNKITQMRVTDLLNLACSSVLPGGGTNLELALHCLHDTRGDILAALDMLLMKGVRRDPCHPLGDYHYTGTEKWTTAEKRLFNRAICLNNKDFFLMQKMIKHKTVAQCVEYYYTWKKQLKFEWKRTHLLEEDEIKPETESPADGKEIKKLSFSESTSIPSQTSVSREKLKKKIVRAKPNPSPSVHCQTGVQDKNEKKFTVGNFPCKECTKVFDKVKSRNAHMKCHRQQEEQERQAEMKRSRIRVKAEPKEEPEETVLVFTSNNMSNITTS
SIO_010081: LOC122542734
subclass of: SO_0000673
so part of: LOC122542734
location: complement(join(1934526..1934709,1935999..1936177,1937987..1938139,1942134..1942222,1944839..1944914,1951589..1951692,1952890..1953032,1957946..1958009,1959860..1960205,1960787..1961047,1962130..1962304,1962937..1963001,1964802..1966701,1968771..1968898,1969193..1969317,1972378..1972684))
location: region:1934526-1972684:-1
so has part: feature:1972378-1972684:-1:exon
so has part: feature:1969193-1969317:-1:exon
so has part: feature:1968771-1968898:-1:exon
so has part: feature:1964802-1966701:-1:exon
so has part: feature:1962937-1963001:-1:exon
so has part: feature:1962130-1962304:-1:exon
so has part: feature:1960787-1961047:-1:exon
so has part: feature:1959860-1960205:-1:exon
so has part: feature:1957946-1958009:-1:exon
so has part: feature:1952890-1953032:-1:exon
so has part: feature:1951589-1951692:-1:exon
so has part: feature:1944839-1944914:-1:exon
so has part: feature:1942134-1942222:-1:exon
so has part: feature:1937987-1938139:-1:exon
so has part: feature:1935999-1936177:-1:exon
so has part: feature:1934526-1934709:-1:exon

XP_043536659.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1972378-1972684:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1969193-1969317:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1968771-1968898:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1964802-1966701:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1962937-1963001:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1962130-1962304:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1960787-1961047:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1959860-1960205:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1957946-1958009:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1952890-1953032:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1951589-1951692:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1944839-1944914:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1942134-1942222:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1937987-1938139:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1935999-1936177:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1934526-1934709:-1:exon

LOC122542734
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542734
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 541-like isoform X1
translation: MDCYSFTDESSLQTEMHLPLLSDSELPIASNIQRQEFIPDPDDIIYAGMTSIELDYNLETAEIPGDPFADNVDLSLYTVDKGCDSPKIPSDSTDTDSPPVLLGISPVPQKNSPEKSGGKSEGKYGGLQKRRRLSTRHSPQQAFQECSQCGKSFSSASALSKHYLTHSHERRHVCRICNKAFKRQDHLSGHLLTHQKNKPYVCMEHGCDKSYCDSRSLRRHYEVQHGLYCQREPFADNSSKEVDSTEGVLYPQTGQTQTLQCEVGVAQRPTTQVESLSQRSCLPNRDMLRPLTSSVSQKIPCETGATGSKITLHYPTQTHATASVLTSPNICLSERSSTVRQAKFGIMQREHSSSGLNCNITDPYSRVNPSHFSVADPSVSCVENLDSYLLDSMIPGRPSQPAQYTLESSRPASWPQDVNTNHTLSRTETGSTRQQPSQDLVWTNNLATYSGSKGSYSYIVPNSQPPEEVSATFSSGALHKLDSFAQAFTRQNLDIQSNSSVAKNQSENSSMSEFDACGNVFRQLLSYKTNLNQWQAYPEQKREILQEQYSLHQQHQQQIATSLFTQVYMGDQEASPMQNQDQFQNHMLHLISDTQYNLSQSQNSVSQSQVLVTQSQHVLAQKIPSQIQNNGTQSHHPSELLQDFQHSLRQETTSPFLQFQATKQCQLSKNILSCYPQETECTDQQTETGLQPVSRGISECHKKSKKSPFKGQCPPQSMCEEVVVQNQLQSQSEQLEGWSLPPCSNKRGRISNKDVCVKHYNIAGKSSKSVSISRKERQKLDPNCTAPPSQVAMNSFPVQNSLTRSMEDCLQKPSFYANVQDEDIYSLSSIPQEADGSSTVLCRDLVSSSTSHNLDENEENFRCERCQGVFHFLKGLNCHTCPQEGMGKQLSLEDGVKAQKVTDNGIEKMEHGGLFFQYLEDKLSALLLKKPLEENVAVPLVIPVSVPVKSKKDGTSVKSETSPVTPRKSVTTKLTDLLVSSNDSSAQVTETGKQANVNCRGNSKKQRKKRSRPDPLFIPSPASNQTGVLPGMVLYQSHMRSPVCLADHLLEKNFQPPPYTPPPMLSPIRHGSGLYFNRICSLSGSKASHNTYPPKGILASVVDGVDGICGISVVKDDSIVTIEPHINIGTRFQAEIPLLQDKSLLDDSVHQADLVWKPWDDIETNKITQMRVTDLLNLACSSVLPGGGTNLELALHCLHDTRGDILAALDMLLMKGVRRDPCHPLGDYHYTGTEKWTTAEKRLFNRAICLNNKDFFLMQKMIKHKTVAQCVEYYYTWKKQLKFEWKRTHLLEEDEIKPETESPADGKEIKKLVRNAAIYAQSFSESTSIPSQTSVSREKLKKKIVRAKPNPSPSVHCQTGVQDKNEKKFTVGNFPCKECTKVFDKVKSRNAHMKCHRQQEEQERQAEMKRSRIRVKAEPKEEPEETVLVFTSNNMSNITTS
SIO_010081: LOC122542734
subclass of: SO_0000673
so part of: LOC122542734
location: complement(join(1934526..1934709,1935999..1936177,1937960..1938139,1942134..1942222,1944839..1944914,1951589..1951692,1952890..1953032,1957946..1958009,1959860..1960205,1960787..1961047,1962130..1962304,1962937..1963001,1964802..1966701,1968771..1968898,1969193..1969317,1972378..1972684))
location: region:1934526-1972684:-1
so has part: feature:1972378-1972684:-1:exon
so has part: feature:1969193-1969317:-1:exon
so has part: feature:1968771-1968898:-1:exon
so has part: feature:1964802-1966701:-1:exon
so has part: feature:1962937-1963001:-1:exon
so has part: feature:1962130-1962304:-1:exon
so has part: feature:1960787-1961047:-1:exon
so has part: feature:1959860-1960205:-1:exon
so has part: feature:1957946-1958009:-1:exon
so has part: feature:1952890-1953032:-1:exon
so has part: feature:1951589-1951692:-1:exon
so has part: feature:1944839-1944914:-1:exon
so has part: feature:1942134-1942222:-1:exon
so has part: feature:1937960-1938139:-1:exon
so has part: feature:1935999-1936177:-1:exon
so has part: feature:1934526-1934709:-1:exon

XP_043536656.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1972378-1972684:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1969193-1969317:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1968771-1968898:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1964802-1966701:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1962937-1963001:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1962130-1962304:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1960787-1961047:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1959860-1960205:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1957946-1958009:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1952890-1953032:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1951589-1951692:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1944839-1944914:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1942134-1942222:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1937960-1938139:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1935999-1936177:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1934526-1934709:-1:exon

LOC122542734
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542734
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 541-like isoform X1
translation: MDCYSFTDESSLQTEMHLPLLSDSELPIASNIQRQEFIPDPDDIIYAGMTSIELDYNLETAEIPGDPFADNVDLSLYTVDKGCDSPKIPSDSTDTDSPPVLLGISPVPQKNSPEKSGGKSEGKYGGLQKRRRLSTRHSPQQAFQECSQCGKSFSSASALSKHYLTHSHERRHVCRICNKAFKRQDHLSGHLLTHQKNKPYVCMEHGCDKSYCDSRSLRRHYEVQHGLYCQREPFADNSSKEVDSTEGVLYPQTGQTQTLQCEVGVAQRPTTQVESLSQRSCLPNRDMLRPLTSSVSQKIPCETGATGSKITLHYPTQTHATASVLTSPNICLSERSSTVRQAKFGIMQREHSSSGLNCNITDPYSRVNPSHFSVADPSVSCVENLDSYLLDSMIPGRPSQPAQYTLESSRPASWPQDVNTNHTLSRTETGSTRQQPSQDLVWTNNLATYSGSKGSYSYIVPNSQPPEEVSATFSSGALHKLDSFAQAFTRQNLDIQSNSSVAKNQSENSSMSEFDACGNVFRQLLSYKTNLNQWQAYPEQKREILQEQYSLHQQHQQQIATSLFTQVYMGDQEASPMQNQDQFQNHMLHLISDTQYNLSQSQNSVSQSQVLVTQSQHVLAQKIPSQIQNNGTQSHHPSELLQDFQHSLRQETTSPFLQFQATKQCQLSKNILSCYPQETECTDQQTETGLQPVSRGISECHKKSKKSPFKGQCPPQSMCEEVVVQNQLQSQSEQLEGWSLPPCSNKRGRISNKDVCVKHYNIAGKSSKSVSISRKERQKLDPNCTAPPSQVAMNSFPVQNSLTRSMEDCLQKPSFYANVQDEDIYSLSSIPQEADGSSTVLCRDLVSSSTSHNLDENEENFRCERCQGVFHFLKGLNCHTCPQEGMGKQLSLEDGVKAQKVTDNGIEKMEHGGLFFQYLEDKLSALLLKKPLEENVAVPLVIPVSVPVKSKKDGTSVKSETSPVTPRKSVTTKLTDLLVSSNDSSAQVTETGKQANVNCRGNSKKQRKKRSRPDPLFIPSPASNQTGVLPGMVLYQSHMRSPVCLADHLLEKNFQPPPYTPPPMLSPIRHGSGLYFNRICSLSGSKASHNTYPPKGILASVVDGVDGICGISVVKDDSIVTIEPHINIGTRFQAEIPLLQDKSLLDDSVHQADLVWKPWDDIETNKITQMRVTDLLNLACSSVLPGGGTNLELALHCLHDTRGDILAALDMLLMKGVRRDPCHPLGDYHYTGTEKWTTAEKRLFNRAICLNNKDFFLMQKMIKHKTVAQCVEYYYTWKKQLKFEWKRTHLLEEDEIKPETESPADGKEIKKLVRNAAIYAQSFSESTSIPSQTSVSREKLKKKIVRAKPNPSPSVHCQTGVQDKNEKKFTVGNFPCKECTKVFDKVKSRNAHMKCHRQQEEQERQAEMKRSRIRVKAEPKEEPEETVLVFTSNNMSNITTS
SIO_010081: LOC122542734
subclass of: SO_0000673
so part of: LOC122542734
location: complement(join(1934526..1934709,1935999..1936177,1937960..1938139,1942134..1942222,1944839..1944914,1951589..1951692,1952890..1953032,1957946..1958009,1959860..1960205,1960787..1961047,1962130..1962304,1962937..1963001,1964802..1966701,1968771..1968898,1969193..1969317,1972378..1972684))
location: region:1934526-1972684:-1
so has part: feature:1972378-1972684:-1:exon
so has part: feature:1969193-1969317:-1:exon
so has part: feature:1968771-1968898:-1:exon
so has part: feature:1964802-1966701:-1:exon
so has part: feature:1962937-1963001:-1:exon
so has part: feature:1962130-1962304:-1:exon
so has part: feature:1960787-1961047:-1:exon
so has part: feature:1959860-1960205:-1:exon
so has part: feature:1957946-1958009:-1:exon
so has part: feature:1952890-1953032:-1:exon
so has part: feature:1951589-1951692:-1:exon
so has part: feature:1944839-1944914:-1:exon
so has part: feature:1942134-1942222:-1:exon
so has part: feature:1937960-1938139:-1:exon
so has part: feature:1935999-1936177:-1:exon
so has part: feature:1934526-1934709:-1:exon

XP_043536658.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1972378-1972684:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1969193-1969317:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1968771-1968898:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1964802-1966701:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1962937-1963001:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1962130-1962304:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1960787-1961047:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1959860-1960205:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1957946-1958009:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1952890-1953032:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1951589-1951692:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1944839-1944914:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1942134-1942222:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1937960-1938139:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1935999-1936177:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1934526-1934709:-1:exon

LOC122542677
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: LOC122542677
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2079013..2131554
location: region:2079013-2131554:1
so has part: feature:2079013-2131554:1:exon
subclass of: SO_0000010

122542677
type: Gene
SIO_000068: ncbigene

position:2079013:1
position: 2079013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2131554:1
position: 2131554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2079013-2131554:1:exon

LOC122542677
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542677
product: BRD4-interacting chromatin-remodeling complex-associated protein-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680655.1
SIO_010081: LOC122542677
subclass of: SO_0000673
so part of: LOC122542677
location: join(2079013..2079153,2083604..2083649,2086063..2086105,2090337..2090402,2094885..2096939,2100819..2101064,2104667..2105458,2109438..2109681,2110392..2110534,2113522..2113650,2114813..2114874,2117503..2117764,2120565..2120667,2123291..2131554)
location: region:2079013-2131554:1
so has part: feature:2079013-2079153:1:exon
so has part: feature:2083604-2083649:1:exon
so has part: feature:2086063-2086105:1:exon
so has part: feature:2090337-2090402:1:exon
so has part: feature:2094885-2096939:1:exon
so has part: feature:2100819-2101064:1:exon
so has part: feature:2104667-2105458:1:exon
so has part: feature:2109438-2109681:1:exon
so has part: feature:2110392-2110534:1:exon
so has part: feature:2113522-2113650:1:exon
so has part: feature:2114813-2114874:1:exon
so has part: feature:2117503-2117764:1:exon
so has part: feature:2120565-2120667:1:exon
so has part: feature:2123291-2131554:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2079013-2079153:1:exon

position:2079153:1
position: 2079153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2083604-2083649:1:exon

position:2083604:1
position: 2083604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2083649:1
position: 2083649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2086063-2086105:1:exon

position:2086063:1
position: 2086063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2086105:1
position: 2086105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2090337-2090402:1:exon

position:2090337:1
position: 2090337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2090402:1
position: 2090402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2094885-2096939:1:exon

position:2094885:1
position: 2094885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2096939:1
position: 2096939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2100819-2101064:1:exon

position:2100819:1
position: 2100819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2101064:1
position: 2101064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2104667-2105458:1:exon

position:2104667:1
position: 2104667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2105458:1
position: 2105458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2109438-2109681:1:exon

position:2109438:1
position: 2109438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2109681:1
position: 2109681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2110392-2110534:1:exon

position:2110392:1
position: 2110392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2110534:1
position: 2110534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2113522-2113650:1:exon

position:2113522:1
position: 2113522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2113650:1
position: 2113650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2114813-2114874:1:exon

position:2114813:1
position: 2114813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2114874:1
position: 2114874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2117503-2117764:1:exon

position:2117503:1
position: 2117503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2117764:1
position: 2117764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2120565-2120667:1:exon

position:2120565:1
position: 2120565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2120667:1
position: 2120667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2123291-2131554:1:exon

position:2123291:1
position: 2123291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC122542677
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542677
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BRD4-interacting chromatin-remodeling complex-associated protein-like
translation: MMSARAVDMDDEDGRCLLDVICDPQALNDFLHGSDQLDGDDLLDTTADPASAFFTDASLNVQDTTVNHLNSGQTQNSSSAVDLDFLEDDILGPSPGSNLQNSDQPCDILQQSLQEANITEQSLEEDADLDIASLHFPSLQPVSQAADASQLFSTSTDLIGLQQQPTVLAQQTLIQQQTIGGQVVNKAINVQPFLQQVGLGNVTLQPVSNLQGLPNGSPSGALGIGQIQVVGQLSNQSVMTINQPAQQIITKAGQPTQVTTVPVGSYISSPASDQQQVALNSAGVSPPNAGLVLQKSAPPGALNGNSLFAGTSIAQANQALTVRPTMSNPMTQAPLSAQNVIIQRTPTPIQPKPTGGVIQHKLFQISSKPFASTNTALTIQNETSLQQQQQQQQQQQQQQQQKAQQNVTFMAGKPVQNVVFSASGTGFPQTISSNVFKQHQAQQQALGKSLSLHLQGGSIVIQPQHMQQAMLQSQNQFLLQGQLSGASAVPLSQQLSALQANVGGQILTAQSAGGQAPATHIIASQGPAGQLIANQTLPAQILTNQNIAGQLNLSQVIAAQNAHGATHILSAPIQLQPGPVGQSAVFQMPVSLANSLNPQTSAPVQATLAGGAVNQQSQSAVVQGVTLPNQVTMLNSGESLGQSVSIQQPASNAQGSSVIQQQAGPGPGLMALGNGQPSLLTVQTAIASPAQPSQQQQSVQAQLASAPQSSSSSMVQTPGKIIISQQGSAGVISQDAADMFFQQQEQKQQQLYQAALKLQQEKGLNQPSPHSLAPTATTSSVPASVIVSSSMGLAPATPAGHADSKGQTVLPSLPNTPFQQIRAGQQMATGQQKTTLQQLPVTSQSPLPQTPQNDGQLHLQMQSPHQMQSPHQMQSPHQSRPPSQPQPLSRPPSRPQSRPSSQPQVLSRPPSEPLSRSCTPSQLPLQPLYVIQTQVQSSPHGAPQGQHPMRPPSQPHVQVQFQNPSQPEPQPQSQAQLTSPTQIHLQVQPTPQVQSQAEVQTPSHLLHPSTAPSQVPSEHHPTQSQSQHVQLQLHCQSQAQAPLQPVYQTLHLTTEQQNRFQMVTSQLQSMSSIPNPTDQHKHIMEKLQQMQHNIILQAKQSAANQTVSGLGPLSNQAPTMLISSQVQSPSVPAQVHTTSASMKSQPHGGGQAALATLLQQTSVLVKTSSAGTTTTTRSPDSKVISGGVPGGTCHIQQGAAVPIQMKPLAQHQIQPALQTKPGVISSISGLNMNLTKGPIQIQLLGKGLTQLMPATSVPAHQMDNKLGGSKVPVSLKPTKEAVINCTETNYTLLGCQRVFLHSLRLYISRSNLPSHASCFKNIYLIIEICSTKCSSVSVDEEFEAVSTQLLKRTQAMLSKYRMLLFEEARRLSPSAEMVMIDRMFIQEEKTSLTTDKQLAKEKPDEYVASSSRSHSLATSSPSPSCNTSAASLETPRAPATQTATQIHPTKLVIKHSGASPSVSWAKDGDDETLHTRSRPPPMKTYEARSRIGLKLKIKQEAGLSKVVHNTALDPVHQSVSTSSVIKSTECLVATSVSQMNGTLEHATPPPAENKPPRSANYCKLPPRKTYRENVQSLSADRTAGTPSQGGTVREDSRRETVSKCEESSKSVIATCKSAESPKVRTARGRPEESAVVSSLSRKARTHTHHLPPKSEEPPGGRAEDGTGGLMKELSDVEDELIIKADPPDGPWELALPPAKRSKSESFDMDNASFSSDSPQDDTLNEHLQSAIDSILNLRQPQSVSVTQNPVSSPYNSSEMNSSPFSPTPHSDSYLAPNHNGGLGARTYTR
SIO_010081: LOC122542677
subclass of: SO_0000673
so part of: LOC122542677
location: join(2079135..2079153,2083604..2083649,2086063..2086105,2090337..2090402,2094885..2096939,2100819..2101064,2104667..2105458,2109438..2109681,2110392..2110534,2113522..2113650,2114813..2114874,2117503..2117764,2120565..2120667,2123291..2124450)
location: region:2079135-2124450:1
so has part: feature:2079135-2079153:1:exon
so has part: feature:2083604-2083649:1:exon
so has part: feature:2086063-2086105:1:exon
so has part: feature:2090337-2090402:1:exon
so has part: feature:2094885-2096939:1:exon
so has part: feature:2100819-2101064:1:exon
so has part: feature:2104667-2105458:1:exon
so has part: feature:2109438-2109681:1:exon
so has part: feature:2110392-2110534:1:exon
so has part: feature:2113522-2113650:1:exon
so has part: feature:2114813-2114874:1:exon
so has part: feature:2117503-2117764:1:exon
so has part: feature:2120565-2120667:1:exon
so has part: feature:2123291-2124450:1:exon

XP_043536590.1
type: Protein
SIO_000068: ncbiprotein

position:2079135:1
position: 2079135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2124450:1
position: 2124450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2079135-2079153:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2083604-2083649:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2086063-2086105:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2090337-2090402:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2094885-2096939:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2100819-2101064:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2104667-2105458:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2109438-2109681:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2110392-2110534:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2113522-2113650:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2114813-2114874:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2117503-2117764:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2120565-2120667:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2123291-2124450:1:exon

LOC122542678
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: LOC122542678
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2144286..2172879
location: region:2144286-2172879:1
so has part: feature:2144286-2172879:1:exon
subclass of: SO_0000010

122542678
type: Gene
SIO_000068: ncbigene

position:2144286:1
position: 2144286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2172879:1
position: 2172879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2144286-2172879:1:exon

LOC122542678
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542678
product: EH domain-containing protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_043680656.1
SIO_010081: LOC122542678
subclass of: SO_0000673
so part of: LOC122542678
location: join(2144286..2144948,2153811..2153988,2170750..2172879)
location: region:2144286-2172879:1
so has part: feature:2144286-2144948:1:exon
so has part: feature:2153811-2153988:1:exon
so has part: feature:2170750-2172879:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2144286-2144948:1:exon

position:2144948:1
position: 2144948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2153811-2153988:1:exon

position:2153811:1
position: 2153811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2153988:1
position: 2153988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2170750-2172879:1:exon

position:2170750:1
position: 2170750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC122542678
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542678
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EH domain-containing protein 2-like
translation: MFSWMKKHEKKKEEVIEKAHTVTEGLKELYKTKLLPLENFYKFHDFHTPSLEDADFDNKPMILVVGQYSTGKTTFIQYLLEEDFPGSRVGPEPTTDSFIAVMHGETESVIPGNALMVDANKPFRKLTPFGNSFLNRLTCAQLPNRVLESISIIDTPGILSGAKQKVTRGESIYNLNPSPHGVSSSPCIQWTFTDLEDVTLPVFWWGDVGSGWGWAECVRLTLIQMNVSFLQEQLRVHDFSKFPSLKPKMMDELDHMLTYDVAKLMPLVRQEELEMPEQLVHGGAFDGTSNGPFVEGIADGTCEGADDDDEWVVTKDKPKYDEIFYNLSPMDGKINGMKAKNWMITTKLPNSVLGRIWKLSDVDQDGMLDDEEFALANHLIEVKLDGHGLPTELPGYLVPPSKRRQVGSAE
SIO_010081: LOC122542678
subclass of: SO_0000673
so part of: LOC122542678
location: join(2144542..2144948,2153811..2153988,2170750..2171397)
location: region:2144542-2171397:1
so has part: feature:2144542-2144948:1:exon
so has part: feature:2153811-2153988:1:exon
so has part: feature:2170750-2171397:1:exon

XP_043536591.1
type: Protein
SIO_000068: ncbiprotein

position:2144542:1
position: 2144542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2171397:1
position: 2171397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2144542-2144948:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2153811-2153988:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2170750-2171397:1:exon

LOC122542679
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: LOC122542679
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2182228..>2183937)
location: region:2182228-2183937:-1
so has part: feature:2182228-2183937:-1:exon
subclass of: SO_0000010

122542679
type: Gene
SIO_000068: ncbigene

position:2182228:-1
position: 2182228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2183937:-1
position: 2183937
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2182228-2183937:-1:exon

LOC122542679
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542679
product: basic proline-rich protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 45% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_043680657.1
SIO_010081: LOC122542679
subclass of: SO_0000673
so part of: LOC122542679
location: complement(2182228..>2183937)
location: region:2182228-2183937:-1
so has part: feature:2182228-2183937:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2182228-2183937:-1:exon

LOC122542679
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542679
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: basic proline-rich protein-like
translation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
SIO_010081: LOC122542679
subclass of: SO_0000673
so part of: LOC122542679
location: complement(2182228..>2183937)
location: region:2182228-2183937:-1
so has part: feature:2182228-2183937:-1:exon

XP_043536592.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2182228-2183937:-1:exon

nop53
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: nop53
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2184178..2201805
location: region:2184178-2201805:1
so has part: feature:2184178-2201805:1:exon
subclass of: SO_0000010

122542738
type: Gene
SIO_000068: ncbigene

position:2184178:1
position: 2184178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2201805:1
position: 2201805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2184178-2201805:1:exon

nop53
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: nop53
product: NOP53 ribosome biogenesis factor
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680728.1
SIO_010081: nop53
subclass of: SO_0000673
so part of: nop53
location: join(2184178..2184286,2185943..2186027,2188092..2188279,2188872..2188942,2189925..2190020,2193281..2193385,2194169..2194342,2195753..2195928,2196804..2196870,2198503..2198579,2199228..2199284,2201718..2201805)
location: region:2184178-2201805:1
so has part: feature:2184178-2184286:1:exon
so has part: feature:2185943-2186027:1:exon
so has part: feature:2188092-2188279:1:exon
so has part: feature:2188872-2188942:1:exon
so has part: feature:2189925-2190020:1:exon
so has part: feature:2193281-2193385:1:exon
so has part: feature:2194169-2194342:1:exon
so has part: feature:2195753-2195928:1:exon
so has part: feature:2196804-2196870:1:exon
so has part: feature:2198503-2198579:1:exon
so has part: feature:2199228-2199284:1:exon
so has part: feature:2201718-2201805:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2184178-2184286:1:exon

position:2184286:1
position: 2184286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2185943-2186027:1:exon

position:2185943:1
position: 2185943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2186027:1
position: 2186027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2188092-2188279:1:exon

position:2188092:1
position: 2188092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2188279:1
position: 2188279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2188872-2188942:1:exon

position:2188872:1
position: 2188872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2188942:1
position: 2188942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2189925-2190020:1:exon

position:2189925:1
position: 2189925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2190020:1
position: 2190020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2193281-2193385:1:exon

position:2193281:1
position: 2193281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2193385:1
position: 2193385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2194169-2194342:1:exon

position:2194169:1
position: 2194169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2194342:1
position: 2194342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2195753-2195928:1:exon

position:2195753:1
position: 2195753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2195928:1
position: 2195928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2196804-2196870:1:exon

position:2196804:1
position: 2196804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2196870:1
position: 2196870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2198503-2198579:1:exon

position:2198503:1
position: 2198503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2198579:1
position: 2198579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2199228-2199284:1:exon

position:2199228:1
position: 2199228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2199284:1
position: 2199284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2201718-2201805:1:exon

position:2201718:1
position: 2201718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

nop53
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: nop53
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosome biogenesis protein NOP53
translation: MSHKSLFIFRGLVSEKSDDNLFFVDTGDDVQDLIHNKGKLKPLRVDLILQSDSKVPAPKDILSYQIPNNRKLRRKAEREKHFGIVSRKERLLYARTQKPVVKAKPDPNTNPARDFYDLWSNIGPLDKELEGKDAWFLEQTKKKRLKRPQKLNQKPSQVSAIEVIAPGGSYNPTFESHQALLFEAHEVEVKKLRAKERIARQVAFPSCEELPTEETVLQELCQGLLVDSDGEEQDKGPKAAEEPEAGPVWNAACCEKKTEKERKQEKLMRKQLQQLKQEKKAQQKQQDLFRLRSIKGEVKELELKLAKRKAKRVEKRKAEANKPRRLGRLKYEDPDLDIKLSDELTGTLRALKPEGSILADRFKSFQKRNLIEPRIRAKFKRKHKLKYVEKRAFREVTL
SIO_010081: nop53
subclass of: SO_0000673
so part of: nop53
location: join(2184193..2184286,2185943..2186027,2188092..2188279,2188872..2188942,2189925..2190020,2193281..2193385,2194169..2194342,2195753..2195928,2196804..2196870,2198503..2198579,2199228..2199284,2201718..2201724)
location: region:2184193-2201724:1
so has part: feature:2184193-2184286:1:exon
so has part: feature:2185943-2186027:1:exon
so has part: feature:2188092-2188279:1:exon
so has part: feature:2188872-2188942:1:exon
so has part: feature:2189925-2190020:1:exon
so has part: feature:2193281-2193385:1:exon
so has part: feature:2194169-2194342:1:exon
so has part: feature:2195753-2195928:1:exon
so has part: feature:2196804-2196870:1:exon
so has part: feature:2198503-2198579:1:exon
so has part: feature:2199228-2199284:1:exon
so has part: feature:2201718-2201724:1:exon

XP_043536663.1
type: Protein
SIO_000068: ncbiprotein

position:2184193:1
position: 2184193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2201724:1
position: 2201724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2184193-2184286:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2185943-2186027:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2188092-2188279:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2188872-2188942:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2189925-2190020:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2193281-2193385:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2194169-2194342:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2195753-2195928:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2196804-2196870:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2198503-2198579:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2199228-2199284:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2201718-2201724:1:exon

LOC122542736
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: LOC122542736
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2208823..2227393)
location: region:2208823-2227393:-1
so has part: feature:2208823-2227393:-1:exon
subclass of: SO_0000010

122542736
type: Gene
SIO_000068: ncbigene

position:2208823:-1
position: 2208823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2227393:-1
position: 2227393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2208823-2227393:-1:exon

LOC122542736
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542736
product: hypoxia-inducible factor 1-alpha-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680727.1
SIO_010081: LOC122542736
subclass of: SO_0000673
so part of: LOC122542736
location: complement(join(2208823..2212415,2215367..2215490,2216972..2217080,2217973..2218673,2222350..2222418,2223086..2223333,2224678..2224853,2227374..2227393))
location: region:2208823-2227393:-1
so has part: feature:2227374-2227393:-1:exon
so has part: feature:2224678-2224853:-1:exon
so has part: feature:2223086-2223333:-1:exon
so has part: feature:2222350-2222418:-1:exon
so has part: feature:2217973-2218673:-1:exon
so has part: feature:2216972-2217080:-1:exon
so has part: feature:2215367-2215490:-1:exon
so has part: feature:2208823-2212415:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2227374-2227393:-1:exon

position:2227374:-1
position: 2227374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2224678-2224853:-1:exon

position:2224678:-1
position: 2224678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2224853:-1
position: 2224853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2223086-2223333:-1:exon

position:2223086:-1
position: 2223086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2223333:-1
position: 2223333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2222350-2222418:-1:exon

position:2222350:-1
position: 2222350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2222418:-1
position: 2222418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2217973-2218673:-1:exon

position:2217973:-1
position: 2217973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2218673:-1
position: 2218673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2216972-2217080:-1:exon

position:2216972:-1
position: 2216972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2217080:-1
position: 2217080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2215367-2215490:-1:exon

position:2215367:-1
position: 2215367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2215490:-1
position: 2215490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2208823-2212415:-1:exon

position:2212415:-1
position: 2212415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC122542736
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542736
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hypoxia-inducible factor 1-alpha-like
translation: MEDSVTFSLDQTRLLTPDTDPENGQRLLSQWEENPKKSDELGPAAGDSVVSLDSAGQRDTKAFHFTRRLPDDDQAPLSPEEFCSPALCKLLSPIFNGPEMSSSMDTKPLSKQPGRTREDPDTPGAAVPKPGSSETAGVNIEESEKNLIAADTKALQAKTTQEAMELDLEMLAPYISMEEDFQLNSLECAEDKDGQVCPDVHPEPRRRSSTATDSRSFSGSPTEPRNTGPASGRPRSCSFHGVRPSVQDHPRREGDSAHPEGNSAALQRSCSMTNLSKAPSPAPAPGPGPAPAPAPGPAPAPGPAPAPAPGPAPAPGPASGYYTLAFGGPAFTVAVKNVLLALFQPQAPEAKVQTPSSKGQEATSTGAAQGLEPSDLLDTAGLSRESAQHGLSKQRSQCDSEFGRNHGQLSPQILDRRNLKRKHSLLVGNLQDSNLDVSSEADIVQVTAKRLKKLETQRAETQTETLPPGTPMTLTMQLLGKEVPGPPELTRYDCEVNAPLLDRHRLLQGPELLRALDQSS
SIO_010081: LOC122542736
subclass of: SO_0000673
so part of: LOC122542736
location: complement(join(2212270..2212415,2215367..2215490,2216972..2217080,2217973..2218673,2222350..2222418,2223086..2223333,2224678..2224843))
location: region:2212270-2224843:-1
so has part: feature:2224678-2224843:-1:exon
so has part: feature:2223086-2223333:-1:exon
so has part: feature:2222350-2222418:-1:exon
so has part: feature:2217973-2218673:-1:exon
so has part: feature:2216972-2217080:-1:exon
so has part: feature:2215367-2215490:-1:exon
so has part: feature:2212270-2212415:-1:exon

XP_043536662.1
type: Protein
SIO_000068: ncbiprotein

position:2212270:-1
position: 2212270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2224843:-1
position: 2224843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2224678-2224843:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2223086-2223333:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2222350-2222418:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2217973-2218673:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2216972-2217080:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2215367-2215490:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2212270-2212415:-1:exon

LOC122542681
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: LOC122542681
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2292706..2319336
location: region:2292706-2319336:1
so has part: feature:2292706-2319336:1:exon
subclass of: SO_0000010

122542681
type: Gene
SIO_000068: ncbigene

position:2292706:1
position: 2292706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2319336:1
position: 2319336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2292706-2319336:1:exon

LOC122542681
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542681
product: putative Kunitz-type serine protease inhibitor
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680658.1
SIO_010081: LOC122542681
subclass of: SO_0000673
so part of: LOC122542681
location: join(2292706..2292762,2298797..2298986,2302211..2302264,2303779..2303904,2308123..2308179,2310666..2310836,2311574..2311621,2312993..2313163,2315397..2315477,2316756..2319336)
location: region:2292706-2319336:1
so has part: feature:2292706-2292762:1:exon
so has part: feature:2298797-2298986:1:exon
so has part: feature:2302211-2302264:1:exon
so has part: feature:2303779-2303904:1:exon
so has part: feature:2308123-2308179:1:exon
so has part: feature:2310666-2310836:1:exon
so has part: feature:2311574-2311621:1:exon
so has part: feature:2312993-2313163:1:exon
so has part: feature:2315397-2315477:1:exon
so has part: feature:2316756-2319336:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2292706-2292762:1:exon

position:2292762:1
position: 2292762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2298797-2298986:1:exon

position:2298797:1
position: 2298797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2298986:1
position: 2298986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2302211-2302264:1:exon

position:2302211:1
position: 2302211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2302264:1
position: 2302264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2303779-2303904:1:exon

position:2303779:1
position: 2303779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2303904:1
position: 2303904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2308123-2308179:1:exon

position:2308123:1
position: 2308123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2308179:1
position: 2308179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2310666-2310836:1:exon

position:2310666:1
position: 2310666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2310836:1
position: 2310836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2311574-2311621:1:exon

position:2311574:1
position: 2311574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2311621:1
position: 2311621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2312993-2313163:1:exon

position:2312993:1
position: 2312993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2313163:1
position: 2313163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2315397-2315477:1:exon

position:2315397:1
position: 2315397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2315477:1
position: 2315477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2316756-2319336:1:exon

position:2316756:1
position: 2316756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC122542681
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542681
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative Kunitz-type serine protease inhibitor
translation: MAARPLSSFVPGNRRILGLCFVYFSVDCLSPSKTGPCRASFPRWFYNVSSKTCNEFTYGGCLSNGNNYRSEQECWKYCNGVTEPGSNSVPVLSRSISSLKDCSGPCAASQFQCADGCCVSRDLLCDGTTRCLDKSDEDYCRAVRDSYDQLIKKQDPGPQDNERCTAPKKVGSCRAAFPRWYFDTKSRSCREFVYGGCKGNKNNFVSEHQCLVACAGLKEDVPEPHKLQSETDDKEYCFAPVVTGRCRASFPRWFYNPASLMCERFVYGGCGGNKNNYPSELACLARCTGKTVPVDNQKDEEDGEFNTQHHAGTPHNVPAISMVILLSICVLVLLGGVIYFIVKLTKTDHTVSYQRAPHRDDKETLISTVPL
SIO_010081: LOC122542681
subclass of: SO_0000673
so part of: LOC122542681
location: join(2292706..2292762,2298797..2298986,2302211..2302264,2303779..2303904,2308123..2308179,2310666..2310836,2311574..2311621,2312993..2313163,2315397..2315477,2316756..2316916)
location: region:2292706-2316916:1
so has part: feature:2292706-2292762:1:exon
so has part: feature:2298797-2298986:1:exon
so has part: feature:2302211-2302264:1:exon
so has part: feature:2303779-2303904:1:exon
so has part: feature:2308123-2308179:1:exon
so has part: feature:2310666-2310836:1:exon
so has part: feature:2311574-2311621:1:exon
so has part: feature:2312993-2313163:1:exon
so has part: feature:2315397-2315477:1:exon
so has part: feature:2316756-2316916:1:exon

XP_043536593.1
type: Protein
SIO_000068: ncbiprotein

position:2316916:1
position: 2316916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2292706-2292762:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2298797-2298986:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2302211-2302264:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2303779-2303904:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2308123-2308179:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2310666-2310836:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2311574-2311621:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2312993-2313163:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2315397-2315477:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2316756-2316916:1:exon

LOC122542739
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: LOC122542739
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2323741..2334852
location: region:2323741-2334852:1
so has part: feature:2323741-2334852:1:exon
subclass of: SO_0000011

122542739
type: Gene
SIO_000068: ncbigene

position:2323741:1
position: 2323741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2334852:1
position: 2334852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2323741-2334852:1:exon

LOC122542739
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 36176
nc RNA class: lncRNA
gene: LOC122542739
product: uncharacterized LOC122542739
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_006309859.1
SIO_010081: LOC122542739
subclass of: SO_0000673
so part of: LOC122542739
location: join(2323741..2323855,2323955..2323987,2334554..2334852)
location: region:2323741-2334852:1
so has part: feature:2323741-2323855:1:exon
so has part: feature:2323955-2323987:1:exon
so has part: feature:2334554-2334852:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2323741-2323855:1:exon

position:2323855:1
position: 2323855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2323955-2323987:1:exon

position:2323955:1
position: 2323955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2323987:1
position: 2323987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2334554-2334852:1:exon

position:2334554:1
position: 2334554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

rnf40
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: rnf40
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2380513..2382309)
location: region:2380513-2382309:-1
so has part: feature:2380513-2382309:-1:exon
subclass of: SO_0000010

122542931
type: Gene
SIO_000068: ncbigene

position:2380513:-1
position: 2380513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2382309:-1
position: 2382309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2380513-2382309:-1:exon

rnf40
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: rnf40
product: ring finger protein 40
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_043681075.1
SIO_010081: rnf40
subclass of: SO_0000673
so part of: rnf40
location: complement(join(2380513..2380731,2382130..2382309))
location: region:2380513-2382309:-1
so has part: feature:2382130-2382309:-1:exon
so has part: feature:2380513-2380731:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2382130-2382309:-1:exon

position:2382130:-1
position: 2382130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2380513-2380731:-1:exon

position:2380731:-1
position: 2380731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

rnf40
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: rnf40
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase BRE1B
translation: MRNIPEDVVKETPEYKCLQSQFSLLYNESLQVKTQLDEARALLLTTKNAHLRQIEHMESDELSLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGTGERGPSGFHPSHWGWLTGTV
SIO_010081: rnf40
subclass of: SO_0000673
so part of: rnf40
location: complement(join(2380528..2380731,2382130..2382303))
location: region:2380528-2382303:-1
so has part: feature:2382130-2382303:-1:exon
so has part: feature:2380528-2380731:-1:exon

XP_043537010.1
type: Protein
SIO_000068: ncbiprotein

position:2380528:-1
position: 2380528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2382303:-1
position: 2382303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2382130-2382303:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2380528-2380731:-1:exon

LOC122542740
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: LOC122542740
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2391875..2404791
location: region:2391875-2404791:1
so has part: feature:2391875-2404791:1:exon
subclass of: SO_0000010

122542740
type: Gene
SIO_000068: ncbigene

position:2391875:1
position: 2391875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2404791:1
position: 2404791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2391875-2404791:1:exon

LOC122542740
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542740
product: uncharacterized LOC122542740
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_043680729.1
SIO_010081: LOC122542740
subclass of: SO_0000673
so part of: LOC122542740
location: join(2391875..2391883,2393934..2394212,2394728..2395013,2395140..2396297,2401483..2404791)
location: region:2391875-2404791:1
so has part: feature:2391875-2391883:1:exon
so has part: feature:2393934-2394212:1:exon
so has part: feature:2394728-2395013:1:exon
so has part: feature:2395140-2396297:1:exon
so has part: feature:2401483-2404791:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2391875-2391883:1:exon

position:2391883:1
position: 2391883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2393934-2394212:1:exon

position:2393934:1
position: 2393934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2394212:1
position: 2394212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2394728-2395013:1:exon

position:2394728:1
position: 2394728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2395013:1
position: 2395013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2395140-2396297:1:exon

position:2395140:1
position: 2395140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2396297:1
position: 2396297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2401483-2404791:1:exon

position:2401483:1
position: 2401483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC122542740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542740
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC122542740
translation: METLSLLGSATTLASSMVEMEVGTETKAGDSGSLETPDCPFRDEASPDRIAQSGADKQEDAEQYEESPEFGGISNIDLEMEQIFANMELLQKKAPEDLGAIVEEPSFQLGAVSEGDSLLDVYEDTDVEVSGISLLDIAYVNGTEESQTCNSESSEDNDLQRQTQGVGEAGRDAEGSRGVCTCSGSVCTCSGGVGTCSGGVGACANGRRACGGAACEDQHSSRHDGEESQSGSEESFKLNGYPAAMESESAARGEMEDSGHSNGLAEGAGVIKGSLRVENDRLLIEKIKKYYESAEMANDQSYLQRRESISFIPTGVVRDSILRFNYQSIPEGPSGKASGHSRSAVSGSDPQTPPGGGQLPLGSARVPAAPGAAAEPPAEFRSSAEIIKVWREMEKAAHFCHQHEAWGGCRKAVAESEGPPGPRYTEPLLIVEDSDLRPSTDLPKAPADVQEGNRRDRGPEVEASRGDESLPAGRVPCTPCWASHGLPRCGGLHSCLLQSSEKIMSRVQVLAQMYSQRVSRRKAAMPRRIWELEPKARAEEQPRRRRPGLRVTRAREEVYVETDDEVTALQHPGPFGHVVIQDPTPLLYAQENIVQLSVSKAKSEISSLQLRDPREDASSQQRANSIARDISSLENSLPTSPQSPNITSPDSLPLGVSTELPSFTRISSGPLSLTSTPPGSSSANLPVSGIGPSLTTGLTAQSPTSECLAHTQHSPLPPCKTRPVPPPSQTGPRASSPLSGRSSPLPLVRHMDQSLVSDWSDTAPKGILQTGTKRTNPKTPPSLPQTPDHSQSPSLLLCNPLEQTPHSSALKGCGVREHHPKGCGVGETRLGRCGLEVPHPHGCGLEEPYPGGSGLEEPRPGGSGLEEPSLGGCGLEEPCPRGCDLDEPCPGGCGLEEPRPQEGVAAHRGRGSVARSLSCPVPGAPHEAALPKPGSPLACEGSEFCCSLPPWVSLRGRSPSPSAIRQLEQSSRGTANLGRATHTVQPSPTMGPEAKPPPSPLPSRTDPSSQVCPPSGPGPLSSGSRAGGSPGPGVVGKPCCTVIPGDSVETQPLSLSLRLRSPSPYRRQQCLRVPDTMGANPREELPTFSNLRPASLQLCPAIGPTVHSPPPRASSPPGQAPSLLATNPRSPSPALPVPRPQFPRGSINSLPLPDGPQVYHSDKADQARFPDSDLGVCLPPPTVRSWSNRGSSLRGCEEPGTPSRPHSPGDRNVPEPAPRLRSPSPPSGSPWPESSSSQRSVFPTQSDRKLRERRPSEDTELPDAVVSPGAGSALCSSADDPELSVSPQPRASPGCQPPVRSETPKDPAPSVRGRSLTSPLATAPAWALYLPTRGHSVEVFCPMPFPRPRVHSPVSVTRLDFTSPEMSTSRCPSPSPSQSSSRSGSPTPPWAGRQSQSPPSSSSDSSPSCQRPTAMSPVPSPSSPGTGAYHSVIQQIANGSCVGVKDQWGTPLGGSVGKDCAQVRLEHREQSCPVSPPQPRAGGETIRWTEGLDSVVCPLISPEPVSIVGPSPCGQEAETEDGDREMFTGVGSAHRPSTNPSSSQMEQCHVLRPGRELGREKGNIKTSYSTTVNLQIGGSGKRATFSRAQVSLTQMFLPAAGQSIRKVNGSSGTSRTT
SIO_010081: LOC122542740
subclass of: SO_0000673
so part of: LOC122542740
location: join(2393967..2394212,2394728..2395013,2395140..2396297,2401483..2404646)
location: region:2393967-2404646:1
so has part: feature:2393967-2394212:1:exon
so has part: feature:2394728-2395013:1:exon
so has part: feature:2395140-2396297:1:exon
so has part: feature:2401483-2404646:1:exon

XP_043536664.1
type: Protein
SIO_000068: ncbiprotein

position:2393967:1
position: 2393967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2404646:1
position: 2404646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2393967-2394212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2394728-2395013:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2395140-2396297:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2401483-2404646:1:exon

LOC122542682
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: LOC122542682
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2428364..2482927
location: region:2428364-2482927:1
so has part: feature:2428364-2482927:1:exon
subclass of: SO_0000010

122542682
type: Gene
SIO_000068: ncbigene

position:2428364:1
position: 2428364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2482927:1
position: 2482927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2428364-2482927:1:exon

LOC122542682
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542682
product: cytoglobin-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_043680659.1
SIO_010081: LOC122542682
subclass of: SO_0000673
so part of: LOC122542682
location: join(2428364..2428982,2446867..2446893,2461403..2461510,2464227..2464347,2482793..2482927)
location: region:2428364-2482927:1
so has part: feature:2428364-2428982:1:exon
so has part: feature:2446867-2446893:1:exon
so has part: feature:2461403-2461510:1:exon
so has part: feature:2464227-2464347:1:exon
so has part: feature:2482793-2482927:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2428364-2428982:1:exon

position:2428982:1
position: 2428982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2446867-2446893:1:exon

position:2446867:1
position: 2446867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2446893:1
position: 2446893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2461403-2461510:1:exon

position:2461403:1
position: 2461403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2461510:1
position: 2461510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2464227-2464347:1:exon

position:2464227:1
position: 2464227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2464347:1
position: 2464347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2482793-2482927:1:exon

position:2482793:1
position: 2482793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC122542682
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542682
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoglobin-1-like
translation: MGCALSGTGLDPGKAAGDVNSPVPRSEAARSELIASDSDPPLPLSEQQKELIRQSWVILHQDIARVGIIMFIRSRESDELSRLFETHPECKDVFFLFRDIDDLQQLKMSKELQSHGLRVMSFIEKSVARLEQEDKLEQLAFELGRSHCRYNAPPKYYEGLFDYLTRTMKRGYYDAEQSNNINQSSHTKRRAQSGLKANQNAV
SIO_010081: LOC122542682
subclass of: SO_0000673
so part of: LOC122542682
location: join(2428765..2428982,2446867..2446893,2461403..2461510,2464227..2464347,2482793..2482927)
location: region:2428765-2482927:1
so has part: feature:2428765-2428982:1:exon
so has part: feature:2446867-2446893:1:exon
so has part: feature:2461403-2461510:1:exon
so has part: feature:2464227-2464347:1:exon
so has part: feature:2482793-2482927:1:exon

XP_043536594.1
type: Protein
SIO_000068: ncbiprotein

position:2428765:1
position: 2428765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2428765-2428982:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2446867-2446893:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2461403-2461510:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2464227-2464347:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2482793-2482927:1:exon

sae1
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: sae1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2571173..2751262
location: region:2571173-2751262:1
so has part: feature:2571173-2751262:1:exon
subclass of: SO_0000010

122542747
type: Gene
SIO_000068: ncbigene

position:2571173:1
position: 2571173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2751262:1
position: 2751262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2571173-2751262:1:exon

sae1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: sae1
product: SUMO1 activating enzyme subunit 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680745.1
SIO_010081: sae1
subclass of: SO_0000673
so part of: sae1
location: join(2571173..2571333,2576665..2576776,2578274..2578447,2665317..2665459,2666349..2666448,2695722..2695827,2747019..2747163,2750920..2751262)
location: region:2571173-2751262:1
so has part: feature:2571173-2571333:1:exon
so has part: feature:2576665-2576776:1:exon
so has part: feature:2578274-2578447:1:exon
so has part: feature:2665317-2665459:1:exon
so has part: feature:2666349-2666448:1:exon
so has part: feature:2695722-2695827:1:exon
so has part: feature:2747019-2747163:1:exon
so has part: feature:2750920-2751262:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2571173-2571333:1:exon

position:2571333:1
position: 2571333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2576665-2576776:1:exon

position:2576665:1
position: 2576665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2576776:1
position: 2576776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2578274-2578447:1:exon

position:2578274:1
position: 2578274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2578447:1
position: 2578447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2665317-2665459:1:exon

position:2665317:1
position: 2665317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2665459:1
position: 2665459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2666349-2666448:1:exon

position:2666349:1
position: 2666349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2666448:1
position: 2666448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2695722-2695827:1:exon

position:2695722:1
position: 2695722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2695827:1
position: 2695827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2747019-2747163:1:exon

position:2747019:1
position: 2747019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2747163:1
position: 2747163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2750920-2751262:1:exon

position:2750920:1
position: 2750920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

sae1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: sae1
product: SUMO1 activating enzyme subunit 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680748.1
SIO_010081: sae1
subclass of: SO_0000673
so part of: sae1
location: join(2571174..2571333,2576665..2576776,2578274..2578447,2665317..2665459,2666349..2666448,2695722..2695827,2747019..2747163,2748764..2748833,2750920..2751262)
location: region:2571174-2751262:1
so has part: feature:2571174-2571333:1:exon
so has part: feature:2576665-2576776:1:exon
so has part: feature:2578274-2578447:1:exon
so has part: feature:2665317-2665459:1:exon
so has part: feature:2666349-2666448:1:exon
so has part: feature:2695722-2695827:1:exon
so has part: feature:2747019-2747163:1:exon
so has part: feature:2748764-2748833:1:exon
so has part: feature:2750920-2751262:1:exon

position:2571174:1
position: 2571174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2571174-2571333:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2576665-2576776:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2578274-2578447:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2665317-2665459:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2666349-2666448:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2695722-2695827:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2747019-2747163:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2748764-2748833:1:exon

position:2748764:1
position: 2748764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2748833:1
position: 2748833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2750920-2751262:1:exon

sae1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: sae1
product: SUMO1 activating enzyme subunit 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_043680747.1
SIO_010081: sae1
subclass of: SO_0000673
so part of: sae1
location: join(2571174..2571333,2576665..2576776,2578274..2578447,2665317..2665459,2666349..2666448,2695722..2695827,2698465..2698583)
location: region:2571174-2698583:1
so has part: feature:2571174-2571333:1:exon
so has part: feature:2576665-2576776:1:exon
so has part: feature:2578274-2578447:1:exon
so has part: feature:2665317-2665459:1:exon
so has part: feature:2666349-2666448:1:exon
so has part: feature:2695722-2695827:1:exon
so has part: feature:2698465-2698583:1:exon

position:2698583:1
position: 2698583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2571174-2571333:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2576665-2576776:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2578274-2578447:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2665317-2665459:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2666349-2666448:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2695722-2695827:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2698465-2698583:1:exon

position:2698465:1
position: 2698465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

sae1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: sae1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SUMO-activating enzyme subunit 1 isoform X3
translation: MVEKEEAVISEEEAAQYDRQIRLWGLDAQKRLRGSRVLLVGMKGLGAEVAKNLILAGVKALTLLDHQQATPEDSRSQFLIPTSSLGKNRAEASLERAQNLNPMVEVKVDTENISNKSQEFLAQFDAICLTCCPRDVMVRIDQFCRSHGIKFFAGDVFGYHGYMFSDLGEHTFVEEKQKVVKVGSGEEDGPKAKKVKIDPNETTLIKKTVHFCHLKEALEVDWSSEKAKTCLKRTPSDYFLLQVLLKFRSAKARDPLPENYDEDSELLLQLRSKVLDSLGVKSDLLTDEFVSSCFSELAPVCAVVGGVLSQEIVKALSQRDLPHNNFFFFDGLKSNGIVDCIGPK
SIO_010081: sae1
subclass of: SO_0000673
so part of: sae1
location: join(2571242..2571333,2576665..2576776,2578274..2578447,2665317..2665459,2666349..2666448,2695722..2695827,2747019..2747163,2748764..2748833,2750920..2751012)
location: region:2571242-2751012:1
so has part: feature:2571242-2571333:1:exon
so has part: feature:2576665-2576776:1:exon
so has part: feature:2578274-2578447:1:exon
so has part: feature:2665317-2665459:1:exon
so has part: feature:2666349-2666448:1:exon
so has part: feature:2695722-2695827:1:exon
so has part: feature:2747019-2747163:1:exon
so has part: feature:2748764-2748833:1:exon
so has part: feature:2750920-2751012:1:exon

XP_043536683.1
type: Protein
SIO_000068: ncbiprotein

position:2571242:1
position: 2571242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2751012:1
position: 2751012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2571242-2571333:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2576665-2576776:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2578274-2578447:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2665317-2665459:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2666349-2666448:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2695722-2695827:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2747019-2747163:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2748764-2748833:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2750920-2751012:1:exon

sae1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: sae1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SUMO-activating enzyme subunit 1 isoform X1
translation: MVEKEEAVISEEEAAQYDRQIRLWGLDAQKRLRGSRVLLVGMKGLGAEVAKNLILAGVKALTLLDHQQATPEDSRSQFLIPTSSLGKNRAEASLERAQNLNPMVEVKVDTENISNKSQEFLAQFDAICLTCCPRDVMVRIDQFCRSHGIKFFAGDVFGYHGYMFSDLGEHTFVEEKQKVVKVGSGEEDGPKAKKVKIDPNETTLIKKTVHFCHLKEALEVDWSSEKAKTCLKRTPSDYFLLQVLLKFRSAKARDPLPENYDEDSELLLQLRSKVLDSLGVKSDLLTDEFVRPCRNEIFRTITSSSLMD
SIO_010081: sae1
subclass of: SO_0000673
so part of: sae1
location: join(2571242..2571333,2576665..2576776,2578274..2578447,2665317..2665459,2666349..2666448,2695722..2695827,2747019..2747163,2750920..2750974)
location: region:2571242-2750974:1
so has part: feature:2571242-2571333:1:exon
so has part: feature:2576665-2576776:1:exon
so has part: feature:2578274-2578447:1:exon
so has part: feature:2665317-2665459:1:exon
so has part: feature:2666349-2666448:1:exon
so has part: feature:2695722-2695827:1:exon
so has part: feature:2747019-2747163:1:exon
so has part: feature:2750920-2750974:1:exon

XP_043536680.1
type: Protein
SIO_000068: ncbiprotein

position:2750974:1
position: 2750974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2571242-2571333:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2576665-2576776:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2578274-2578447:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2665317-2665459:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2666349-2666448:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2695722-2695827:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2747019-2747163:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2750920-2750974:1:exon

sae1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: sae1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SUMO-activating enzyme subunit 1 isoform X2
translation: MVEKEEAVISEEEAAQYDRQIRLWGLDAQKRLRGSRVLLVGMKGLGAEVAKNLILAGVKALTLLDHQQATPEDSRSQFLIPTSSLGKNRAEASLERAQNLNPMVEVKVDTENISNKSQEFLAQFDAICLTCCPRDVMVRIDQFCRSHGIKFFAGDVFGYHGYMFSDLGEHTFVEEKQKVVKVGSGEEDGPKAKKVKIDPNETTLIKKTVHFCHLKEALEVDWSSEKAKTCLKRTPSDYFLLQGSGSSRDKSVGL
SIO_010081: sae1
subclass of: SO_0000673
so part of: sae1
location: join(2571242..2571333,2576665..2576776,2578274..2578447,2665317..2665459,2666349..2666448,2695722..2695827,2698465..2698502)
location: region:2571242-2698502:1
so has part: feature:2571242-2571333:1:exon
so has part: feature:2576665-2576776:1:exon
so has part: feature:2578274-2578447:1:exon
so has part: feature:2665317-2665459:1:exon
so has part: feature:2666349-2666448:1:exon
so has part: feature:2695722-2695827:1:exon
so has part: feature:2698465-2698502:1:exon

XP_043536682.1
type: Protein
SIO_000068: ncbiprotein

position:2698502:1
position: 2698502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2571242-2571333:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2576665-2576776:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2578274-2578447:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2665317-2665459:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2666349-2666448:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2695722-2695827:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2698465-2698502:1:exon

LOC122542746
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: LOC122542746
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2594052..2596712)
location: region:2594052-2596712:-1
so has part: feature:2594052-2596712:-1:exon
subclass of: SO_0000010

122542746
type: Gene
SIO_000068: ncbigene

position:2594052:-1
position: 2594052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2596712:-1
position: 2596712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2594052-2596712:-1:exon

LOC122542746
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542746
product: uncharacterized LOC122542746
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_043680744.1
SIO_010081: LOC122542746
subclass of: SO_0000673
so part of: LOC122542746
location: complement(2594052..2596712)
location: region:2594052-2596712:-1
so has part: feature:2594052-2596712:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2594052-2596712:-1:exon

LOC122542746
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542746
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC122542746
translation: MKNRAPDGIGKQMRGPSFTGDKKAKITAKTQKTWMRLATVFAYLLCVSLTAVILVIYYTLIWEPVRTKPGPSNSNLTVANVETGNSSVGHRRRSAFNAVRNSPRGFSNPRYERSHLRRSGGRTGDFVNSPRRGSGMVHGAFAGFSTTVNSGTGLMLITENSEPRAIGSSIPGARSLIDAVTDNGAFRTTDSDDQATARSMAFSTLDSDQRGASGRGATVKSRAFSTSDSGSLKAPSSSSHQQSSTLADSGNGSTTDSGIGIAARGISTLQAPQAAGQKKVINPPPNDPNQAGKSDAASMESNRWAISTSNVGELGVASTLLGLNQHVKSDTDSKTKEVKMDSQYTTQSRHGFYTKSNMESTHAMSLLTDLVHNNWHDEVLRNKMDGNDESSAVISTSNAKRIENIPTMAKPTTDPGLFHTALTSVDNSELGNQRSYKNLNLTDKYNVFAKLRVLDITPKNRERKNSIGSHSDRLDWMLTKEPASTVTHISRLPLLSPSKPAEIWENKELRHTGTTDLEDHHVLQNLNTNKEQPSTTWKQSQVNAEDTYKNTVTNSLPTLPIT
SIO_010081: LOC122542746
subclass of: SO_0000673
so part of: LOC122542746
location: complement(2594450..2596138)
location: region:2594450-2596138:-1
so has part: feature:2594450-2596138:-1:exon

XP_043536679.1
type: Protein
SIO_000068: ncbiprotein

position:2594450:-1
position: 2594450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2596138:-1
position: 2596138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2594450-2596138:-1:exon

ccdc9
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: ccdc9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2602236..2648098)
location: region:2602236-2648098:-1
so has part: feature:2602236-2648098:-1:exon
subclass of: SO_0000010

122542743
type: Gene
SIO_000068: ncbigene

position:2602236:-1
position: 2602236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2648098:-1
position: 2648098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2602236-2648098:-1:exon

ccdc9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: ccdc9
product: coiled-coil domain containing 9, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680737.1
SIO_010081: ccdc9
subclass of: SO_0000673
so part of: ccdc9
location: complement(join(2602236..2602669,2606788..2606859,2608183..2608437,2608882..2609401,2612808..2612877,2617487..2617592,2618169..2618213,2620326..2620378,2621674..2621855,2624102..2624299,2629182..2629265,2634455..2634790,2635908..2636051,2636773..2636883,2639302..2639351,2648046..2648098))
location: region:2602236-2648098:-1
so has part: feature:2648046-2648098:-1:exon
so has part: feature:2639302-2639351:-1:exon
so has part: feature:2636773-2636883:-1:exon
so has part: feature:2635908-2636051:-1:exon
so has part: feature:2634455-2634790:-1:exon
so has part: feature:2629182-2629265:-1:exon
so has part: feature:2624102-2624299:-1:exon
so has part: feature:2621674-2621855:-1:exon
so has part: feature:2620326-2620378:-1:exon
so has part: feature:2618169-2618213:-1:exon
so has part: feature:2617487-2617592:-1:exon
so has part: feature:2612808-2612877:-1:exon
so has part: feature:2608882-2609401:-1:exon
so has part: feature:2608183-2608437:-1:exon
so has part: feature:2606788-2606859:-1:exon
so has part: feature:2602236-2602669:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2648046-2648098:-1:exon

position:2648046:-1
position: 2648046
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 2
SIO_000628: feature:2639302-2639351:-1:exon

position:2639302:-1
position: 2639302
reference: sequence
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position:2639351:-1
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reference: sequence
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urn:…
SIO_000300: 3
SIO_000628: feature:2636773-2636883:-1:exon

position:2636773:-1
position: 2636773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2636883:-1
position: 2636883
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 4
SIO_000628: feature:2635908-2636051:-1:exon

position:2635908:-1
position: 2635908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2636051:-1
position: 2636051
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 5
SIO_000628: feature:2634455-2634790:-1:exon

position:2634455:-1
position: 2634455
reference: sequence
type: ReverseStrandPosition
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position:2634790:-1
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reference: sequence
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urn:…
SIO_000300: 6
SIO_000628: feature:2629182-2629265:-1:exon

position:2629182:-1
position: 2629182
reference: sequence
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position:2629265:-1
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reference: sequence
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urn:…
SIO_000300: 7
SIO_000628: feature:2624102-2624299:-1:exon

position:2624102:-1
position: 2624102
reference: sequence
type: ReverseStrandPosition
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position:2624299:-1
position: 2624299
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 8
SIO_000628: feature:2621674-2621855:-1:exon

position:2621674:-1
position: 2621674
reference: sequence
type: ReverseStrandPosition
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position:2621855:-1
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reference: sequence
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urn:…
SIO_000300: 9
SIO_000628: feature:2620326-2620378:-1:exon

position:2620326:-1
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reference: sequence
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position:2620378:-1
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reference: sequence
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urn:…
SIO_000300: 10
SIO_000628: feature:2618169-2618213:-1:exon

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reference: sequence
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position:2618213:-1
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reference: sequence
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urn:…
SIO_000300: 11
SIO_000628: feature:2617487-2617592:-1:exon

position:2617487:-1
position: 2617487
reference: sequence
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position:2617592:-1
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reference: sequence
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urn:…
SIO_000300: 12
SIO_000628: feature:2612808-2612877:-1:exon

position:2612808:-1
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reference: sequence
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position:2612877:-1
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urn:…
SIO_000300: 13
SIO_000628: feature:2608882-2609401:-1:exon

position:2608882:-1
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reference: sequence
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position:2609401:-1
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urn:…
SIO_000300: 14
SIO_000628: feature:2608183-2608437:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:2608437:-1
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reference: sequence
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urn:…
SIO_000300: 15
SIO_000628: feature:2606788-2606859:-1:exon

position:2606788:-1
position: 2606788
reference: sequence
type: ReverseStrandPosition
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position:2606859:-1
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reference: sequence
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urn:…
SIO_000300: 16
SIO_000628: feature:2602236-2602669:-1:exon

position:2602669:-1
position: 2602669
reference: sequence
type: ReverseStrandPosition
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ccdc9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: ccdc9
product: coiled-coil domain containing 9, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680740.1
SIO_010081: ccdc9
subclass of: SO_0000673
so part of: ccdc9
location: complement(join(2602236..2602669,2606788..2606859,2608183..2608437,2608882..2609401,2612808..2612877,2617487..2617592,2618169..2618213,2620326..2620378,2621674..2621855,2624102..2624275,2629182..2629265,2634455..2634790,2635908..2636051,2636773..2636883,2639302..2639351,2647832..2647941))
location: region:2602236-2647941:-1
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so has part: feature:2635908-2636051:-1:exon
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so has part: feature:2629182-2629265:-1:exon
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so has part: feature:2621674-2621855:-1:exon
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so has part: feature:2606788-2606859:-1:exon
so has part: feature:2602236-2602669:-1:exon

position:2647941:-1
position: 2647941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2647832-2647941:-1:exon

position:2647832:-1
position: 2647832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2639302-2639351:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2636773-2636883:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2635908-2636051:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2634455-2634790:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2629182-2629265:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2624102-2624275:-1:exon

position:2624275:-1
position: 2624275
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 8
SIO_000628: feature:2621674-2621855:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2620326-2620378:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2618169-2618213:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2617487-2617592:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2612808-2612877:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2608882-2609401:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2608183-2608437:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2606788-2606859:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2602236-2602669:-1:exon

ccdc9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: ccdc9
product: coiled-coil domain containing 9, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680736.1
SIO_010081: ccdc9
subclass of: SO_0000673
so part of: ccdc9
location: complement(join(2602236..2602669,2606788..2606859,2608183..2608437,2608882..2609401,2612808..2612877,2617487..2617592,2618169..2618213,2620326..2620378,2621674..2621855,2624102..2624299,2629182..2629265,2634455..2634790,2635908..2636051,2636773..2636883,2639302..2639351,2647832..2647941))
location: region:2602236-2647941:-1
so has part: feature:2647832-2647941:-1:exon
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so has part: feature:2635908-2636051:-1:exon
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so has part: feature:2621674-2621855:-1:exon
so has part: feature:2620326-2620378:-1:exon
so has part: feature:2618169-2618213:-1:exon
so has part: feature:2617487-2617592:-1:exon
so has part: feature:2612808-2612877:-1:exon
so has part: feature:2608882-2609401:-1:exon
so has part: feature:2608183-2608437:-1:exon
so has part: feature:2606788-2606859:-1:exon
so has part: feature:2602236-2602669:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2647832-2647941:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2639302-2639351:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2636773-2636883:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2635908-2636051:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2634455-2634790:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2629182-2629265:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2624102-2624299:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2621674-2621855:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2620326-2620378:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2618169-2618213:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2617487-2617592:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2612808-2612877:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2608882-2609401:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2608183-2608437:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2606788-2606859:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2602236-2602669:-1:exon

ccdc9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: ccdc9
product: coiled-coil domain containing 9, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680741.1
SIO_010081: ccdc9
subclass of: SO_0000673
so part of: ccdc9
location: complement(join(2602236..2602669,2606788..2606859,2608183..2608437,2608882..2609401,2612808..2612877,2617487..2617592,2620326..2620378,2621674..2621855,2624102..2624299,2629182..2629265,2634455..2634790,2635908..2636051,2636773..2636883,2639302..2639351,2647832..2647940))
location: region:2602236-2647940:-1
so has part: feature:2647832-2647940:-1:exon
so has part: feature:2639302-2639351:-1:exon
so has part: feature:2636773-2636883:-1:exon
so has part: feature:2635908-2636051:-1:exon
so has part: feature:2634455-2634790:-1:exon
so has part: feature:2629182-2629265:-1:exon
so has part: feature:2624102-2624299:-1:exon
so has part: feature:2621674-2621855:-1:exon
so has part: feature:2620326-2620378:-1:exon
so has part: feature:2617487-2617592:-1:exon
so has part: feature:2612808-2612877:-1:exon
so has part: feature:2608882-2609401:-1:exon
so has part: feature:2608183-2608437:-1:exon
so has part: feature:2606788-2606859:-1:exon
so has part: feature:2602236-2602669:-1:exon

position:2647940:-1
position: 2647940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2647832-2647940:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2639302-2639351:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2636773-2636883:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2635908-2636051:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2634455-2634790:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2629182-2629265:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2624102-2624299:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2621674-2621855:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2620326-2620378:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2617487-2617592:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2612808-2612877:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2608882-2609401:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2608183-2608437:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2606788-2606859:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2602236-2602669:-1:exon

ccdc9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: ccdc9
product: coiled-coil domain containing 9, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680739.1
SIO_010081: ccdc9
subclass of: SO_0000673
so part of: ccdc9
location: complement(join(2602236..2602669,2606788..2606859,2608183..2608437,2608882..2609401,2612808..2612877,2617487..2617592,2618169..2618213,2620326..2620378,2621674..2621855,2624102..2624299,2629182..2629265,2634455..2634790,2635908..2636051,2636773..2636883,2639302..2639351,2646252..2646276))
location: region:2602236-2646276:-1
so has part: feature:2646252-2646276:-1:exon
so has part: feature:2639302-2639351:-1:exon
so has part: feature:2636773-2636883:-1:exon
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so has part: feature:2634455-2634790:-1:exon
so has part: feature:2629182-2629265:-1:exon
so has part: feature:2624102-2624299:-1:exon
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so has part: feature:2617487-2617592:-1:exon
so has part: feature:2612808-2612877:-1:exon
so has part: feature:2608882-2609401:-1:exon
so has part: feature:2608183-2608437:-1:exon
so has part: feature:2606788-2606859:-1:exon
so has part: feature:2602236-2602669:-1:exon

position:2646276:-1
position: 2646276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2646252-2646276:-1:exon

position:2646252:-1
position: 2646252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2639302-2639351:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2636773-2636883:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2635908-2636051:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2634455-2634790:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2629182-2629265:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2624102-2624299:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2621674-2621855:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2620326-2620378:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2618169-2618213:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2617487-2617592:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2612808-2612877:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2608882-2609401:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2608183-2608437:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2606788-2606859:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2602236-2602669:-1:exon

ccdc9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: ccdc9
product: coiled-coil domain containing 9, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680738.1
SIO_010081: ccdc9
subclass of: SO_0000673
so part of: ccdc9
location: complement(join(2602236..2602669,2606788..2606859,2608183..2608437,2608882..2609401,2612808..2612877,2617487..2617592,2618169..2618213,2620326..2620378,2621674..2621855,2624102..2624299,2629182..2629265,2634455..2634790,2635908..2636051,2636773..2636883,2639302..2639351,2641321..2641344))
location: region:2602236-2641344:-1
so has part: feature:2641321-2641344:-1:exon
so has part: feature:2639302-2639351:-1:exon
so has part: feature:2636773-2636883:-1:exon
so has part: feature:2635908-2636051:-1:exon
so has part: feature:2634455-2634790:-1:exon
so has part: feature:2629182-2629265:-1:exon
so has part: feature:2624102-2624299:-1:exon
so has part: feature:2621674-2621855:-1:exon
so has part: feature:2620326-2620378:-1:exon
so has part: feature:2618169-2618213:-1:exon
so has part: feature:2617487-2617592:-1:exon
so has part: feature:2612808-2612877:-1:exon
so has part: feature:2608882-2609401:-1:exon
so has part: feature:2608183-2608437:-1:exon
so has part: feature:2606788-2606859:-1:exon
so has part: feature:2602236-2602669:-1:exon

position:2641344:-1
position: 2641344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2641321-2641344:-1:exon

position:2641321:-1
position: 2641321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2639302-2639351:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2636773-2636883:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2635908-2636051:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2634455-2634790:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2629182-2629265:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2624102-2624299:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2621674-2621855:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2620326-2620378:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2618169-2618213:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2617487-2617592:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2612808-2612877:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2608882-2609401:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2608183-2608437:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2606788-2606859:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2602236-2602669:-1:exon

ccdc9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: ccdc9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 9 isoform X2
translation: MSMTIDPDLKTREEKDAELDRRIEALRKKNQALMKRHQEIEEDRKKAEEDGISVTSRKQKHEAEHERKWGGKEIVMDMADLSKSPAEKWSVSNRKTASSSRGSLEPPGRRSWTSGPRQEAEDRDGHQRSPGSRTDRMMWGDHPNRSPRNVSGHVSPAAERLSRGDRGGRTRRGRAGGGGPDGGGRGLGTASQQERRVKEWEEKRRQNIEKMNEEMEKIAEYERSQMDGSGEKNPVRNFLDDPRRLGSLPDCDRKDGSRRHVRNWGGPDFDKVKTGLDRGDKEWQGRRSGSKGSVDMTMSMTGRERAEYVRWKKEREQIDQERLERHRNAMGQWRREWDAEKTESMFKDNPVPTGCAEGYSKRGLRNFKRLNLSAKHTDDRRPPKPPTISDFIPASRSKDPKRGRSKQENKIYSMHDNRWETCEAKHEQKEISEQQKEKELKEKPVQDQNQGKADVGEPPADEADDEDEWEDASDDEEEIVGEDVSDSEDELKETKDLEEEEEKKKKDGAGVMEDVAKGAEVVQSPCRSPETSVKEQQARKPRETPKLHIPPQDMTMQPKESGSKPLSPFSLDEYHPVKDWAEEMETTSPRATLQLNPLQTVNATKEEQKVEVKSGDSPNVGESDLEAGKEQEAVTDQTSPQNVSGSCDPADEILKEQAELEIDDANKSGDTATIVVTQATTEKQLNQQEANRRTGDVSEPTTRTKPRTDCVEGNEPSSG
SIO_010081: ccdc9
subclass of: SO_0000673
so part of: ccdc9
location: complement(join(2602665..2602669,2606788..2606859,2608183..2608437,2608882..2609401,2612808..2612877,2617487..2617592,2618169..2618213,2620326..2620378,2621674..2621855,2624102..2624275,2629182..2629265,2634455..2634790,2635908..2636051,2636773..2636883,2639302..2639304))
location: region:2602665-2639304:-1
so has part: feature:2639302-2639304:-1:exon
so has part: feature:2636773-2636883:-1:exon
so has part: feature:2635908-2636051:-1:exon
so has part: feature:2634455-2634790:-1:exon
so has part: feature:2629182-2629265:-1:exon
so has part: feature:2624102-2624275:-1:exon
so has part: feature:2621674-2621855:-1:exon
so has part: feature:2620326-2620378:-1:exon
so has part: feature:2618169-2618213:-1:exon
so has part: feature:2617487-2617592:-1:exon
so has part: feature:2612808-2612877:-1:exon
so has part: feature:2608882-2609401:-1:exon
so has part: feature:2608183-2608437:-1:exon
so has part: feature:2606788-2606859:-1:exon
so has part: feature:2602665-2602669:-1:exon

XP_043536675.1
type: Protein
SIO_000068: ncbiprotein

position:2602665:-1
position: 2602665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2639304:-1
position: 2639304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2639302-2639304:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2636773-2636883:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2635908-2636051:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2634455-2634790:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2629182-2629265:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2624102-2624275:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2621674-2621855:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2620326-2620378:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2618169-2618213:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2617487-2617592:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2612808-2612877:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2608882-2609401:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2608183-2608437:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2606788-2606859:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2602665-2602669:-1:exon

ccdc9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: ccdc9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 9 isoform X3
translation: MSMTIDPDLKTREEKDAELDRRIEALRKKNQALMKRHQEIEEDRKKAEEDGISVTSRKQKHEAEHERKWGGKEIVMDMADLSKSPAEKWSVSNRKTASSSRGSLEPPGRRSWTSGPRQEAEDRDGHQRSPGSRTDRMMWGDHPNRSPRNVSGHVSPAAERLSRGDRGGRTRRGRAGGGGPDGGGRGLGTASQQERRVKEWEEKRRQNIEKMNEEMEKIAEYERSQMRDPGSSFKDGSGEKNPVRNFLDDPRRLGSLPDCDRKDGSRRHVRNWGGPDFDKVKTGLDRGDKEWQGRRSGSKGSVDMTMSMTGRERAEYVRWKKEREQIDQERLERHRNAMGQWRREWDAEKTESMFKDNPVPTGCAEGYSKRDDRRPPKPPTISDFIPASRSKDPKRGRSKQENKIYSMHDNRWETCEAKHEQKEISEQQKEKELKEKPVQDQNQGKADVGEPPADEADDEDEWEDASDDEEEIVGEDVSDSEDELKETKDLEEEEEKKKKDGAGVMEDVAKGAEVVQSPCRSPETSVKEQQARKPRETPKLHIPPQDMTMQPKESGSKPLSPFSLDEYHPVKDWAEEMETTSPRATLQLNPLQTVNATKEEQKVEVKSGDSPNVGESDLEAGKEQEAVTDQTSPQNVSGSCDPADEILKEQAELEIDDANKSGDTATIVVTQATTEKQLNQQEANRRTGDVSEPTTRTKPRTDCVEGNEPSSG
SIO_010081: ccdc9
subclass of: SO_0000673
so part of: ccdc9
location: complement(join(2602665..2602669,2606788..2606859,2608183..2608437,2608882..2609401,2612808..2612877,2617487..2617592,2620326..2620378,2621674..2621855,2624102..2624299,2629182..2629265,2634455..2634790,2635908..2636051,2636773..2636883,2639302..2639304))
location: region:2602665-2639304:-1
so has part: feature:2639302-2639304:-1:exon
so has part: feature:2636773-2636883:-1:exon
so has part: feature:2635908-2636051:-1:exon
so has part: feature:2634455-2634790:-1:exon
so has part: feature:2629182-2629265:-1:exon
so has part: feature:2624102-2624299:-1:exon
so has part: feature:2621674-2621855:-1:exon
so has part: feature:2620326-2620378:-1:exon
so has part: feature:2617487-2617592:-1:exon
so has part: feature:2612808-2612877:-1:exon
so has part: feature:2608882-2609401:-1:exon
so has part: feature:2608183-2608437:-1:exon
so has part: feature:2606788-2606859:-1:exon
so has part: feature:2602665-2602669:-1:exon

XP_043536676.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2639302-2639304:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2636773-2636883:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2635908-2636051:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2634455-2634790:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2629182-2629265:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2624102-2624299:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2621674-2621855:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2620326-2620378:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2617487-2617592:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2612808-2612877:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2608882-2609401:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2608183-2608437:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2606788-2606859:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2602665-2602669:-1:exon

ccdc9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: ccdc9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 9 isoform X1
translation: MSMTIDPDLKTREEKDAELDRRIEALRKKNQALMKRHQEIEEDRKKAEEDGISVTSRKQKHEAEHERKWGGKEIVMDMADLSKSPAEKWSVSNRKTASSSRGSLEPPGRRSWTSGPRQEAEDRDGHQRSPGSRTDRMMWGDHPNRSPRNVSGHVSPAAERLSRGDRGGRTRRGRAGGGGPDGGGRGLGTASQQERRVKEWEEKRRQNIEKMNEEMEKIAEYERSQMRDPGSSFKDGSGEKNPVRNFLDDPRRLGSLPDCDRKDGSRRHVRNWGGPDFDKVKTGLDRGDKEWQGRRSGSKGSVDMTMSMTGRERAEYVRWKKEREQIDQERLERHRNAMGQWRREWDAEKTESMFKDNPVPTGCAEGYSKRGLRNFKRLNLSAKHTDDRRPPKPPTISDFIPASRSKDPKRGRSKQENKIYSMHDNRWETCEAKHEQKEISEQQKEKELKEKPVQDQNQGKADVGEPPADEADDEDEWEDASDDEEEIVGEDVSDSEDELKETKDLEEEEEKKKKDGAGVMEDVAKGAEVVQSPCRSPETSVKEQQARKPRETPKLHIPPQDMTMQPKESGSKPLSPFSLDEYHPVKDWAEEMETTSPRATLQLNPLQTVNATKEEQKVEVKSGDSPNVGESDLEAGKEQEAVTDQTSPQNVSGSCDPADEILKEQAELEIDDANKSGDTATIVVTQATTEKQLNQQEANRRTGDVSEPTTRTKPRTDCVEGNEPSSG
SIO_010081: ccdc9
subclass of: SO_0000673
so part of: ccdc9
location: complement(join(2602665..2602669,2606788..2606859,2608183..2608437,2608882..2609401,2612808..2612877,2617487..2617592,2618169..2618213,2620326..2620378,2621674..2621855,2624102..2624299,2629182..2629265,2634455..2634790,2635908..2636051,2636773..2636883,2639302..2639304))
location: region:2602665-2639304:-1
so has part: feature:2639302-2639304:-1:exon
so has part: feature:2636773-2636883:-1:exon
so has part: feature:2635908-2636051:-1:exon
so has part: feature:2634455-2634790:-1:exon
so has part: feature:2629182-2629265:-1:exon
so has part: feature:2624102-2624299:-1:exon
so has part: feature:2621674-2621855:-1:exon
so has part: feature:2620326-2620378:-1:exon
so has part: feature:2618169-2618213:-1:exon
so has part: feature:2617487-2617592:-1:exon
so has part: feature:2612808-2612877:-1:exon
so has part: feature:2608882-2609401:-1:exon
so has part: feature:2608183-2608437:-1:exon
so has part: feature:2606788-2606859:-1:exon
so has part: feature:2602665-2602669:-1:exon

XP_043536671.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2639302-2639304:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2636773-2636883:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2635908-2636051:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2634455-2634790:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2629182-2629265:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2624102-2624299:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2621674-2621855:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2620326-2620378:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2618169-2618213:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2617487-2617592:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2612808-2612877:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2608882-2609401:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2608183-2608437:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2606788-2606859:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2602665-2602669:-1:exon

ccdc9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: ccdc9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 9 isoform X1
translation: MSMTIDPDLKTREEKDAELDRRIEALRKKNQALMKRHQEIEEDRKKAEEDGISVTSRKQKHEAEHERKWGGKEIVMDMADLSKSPAEKWSVSNRKTASSSRGSLEPPGRRSWTSGPRQEAEDRDGHQRSPGSRTDRMMWGDHPNRSPRNVSGHVSPAAERLSRGDRGGRTRRGRAGGGGPDGGGRGLGTASQQERRVKEWEEKRRQNIEKMNEEMEKIAEYERSQMRDPGSSFKDGSGEKNPVRNFLDDPRRLGSLPDCDRKDGSRRHVRNWGGPDFDKVKTGLDRGDKEWQGRRSGSKGSVDMTMSMTGRERAEYVRWKKEREQIDQERLERHRNAMGQWRREWDAEKTESMFKDNPVPTGCAEGYSKRGLRNFKRLNLSAKHTDDRRPPKPPTISDFIPASRSKDPKRGRSKQENKIYSMHDNRWETCEAKHEQKEISEQQKEKELKEKPVQDQNQGKADVGEPPADEADDEDEWEDASDDEEEIVGEDVSDSEDELKETKDLEEEEEKKKKDGAGVMEDVAKGAEVVQSPCRSPETSVKEQQARKPRETPKLHIPPQDMTMQPKESGSKPLSPFSLDEYHPVKDWAEEMETTSPRATLQLNPLQTVNATKEEQKVEVKSGDSPNVGESDLEAGKEQEAVTDQTSPQNVSGSCDPADEILKEQAELEIDDANKSGDTATIVVTQATTEKQLNQQEANRRTGDVSEPTTRTKPRTDCVEGNEPSSG
SIO_010081: ccdc9
subclass of: SO_0000673
so part of: ccdc9
location: complement(join(2602665..2602669,2606788..2606859,2608183..2608437,2608882..2609401,2612808..2612877,2617487..2617592,2618169..2618213,2620326..2620378,2621674..2621855,2624102..2624299,2629182..2629265,2634455..2634790,2635908..2636051,2636773..2636883,2639302..2639304))
location: region:2602665-2639304:-1
so has part: feature:2639302-2639304:-1:exon
so has part: feature:2636773-2636883:-1:exon
so has part: feature:2635908-2636051:-1:exon
so has part: feature:2634455-2634790:-1:exon
so has part: feature:2629182-2629265:-1:exon
so has part: feature:2624102-2624299:-1:exon
so has part: feature:2621674-2621855:-1:exon
so has part: feature:2620326-2620378:-1:exon
so has part: feature:2618169-2618213:-1:exon
so has part: feature:2617487-2617592:-1:exon
so has part: feature:2612808-2612877:-1:exon
so has part: feature:2608882-2609401:-1:exon
so has part: feature:2608183-2608437:-1:exon
so has part: feature:2606788-2606859:-1:exon
so has part: feature:2602665-2602669:-1:exon

XP_043536672.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2639302-2639304:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2636773-2636883:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2635908-2636051:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2634455-2634790:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2629182-2629265:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2624102-2624299:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2621674-2621855:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2620326-2620378:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2618169-2618213:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2617487-2617592:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2612808-2612877:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2608882-2609401:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2608183-2608437:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2606788-2606859:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2602665-2602669:-1:exon

ccdc9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: ccdc9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 9 isoform X1
translation: MSMTIDPDLKTREEKDAELDRRIEALRKKNQALMKRHQEIEEDRKKAEEDGISVTSRKQKHEAEHERKWGGKEIVMDMADLSKSPAEKWSVSNRKTASSSRGSLEPPGRRSWTSGPRQEAEDRDGHQRSPGSRTDRMMWGDHPNRSPRNVSGHVSPAAERLSRGDRGGRTRRGRAGGGGPDGGGRGLGTASQQERRVKEWEEKRRQNIEKMNEEMEKIAEYERSQMRDPGSSFKDGSGEKNPVRNFLDDPRRLGSLPDCDRKDGSRRHVRNWGGPDFDKVKTGLDRGDKEWQGRRSGSKGSVDMTMSMTGRERAEYVRWKKEREQIDQERLERHRNAMGQWRREWDAEKTESMFKDNPVPTGCAEGYSKRGLRNFKRLNLSAKHTDDRRPPKPPTISDFIPASRSKDPKRGRSKQENKIYSMHDNRWETCEAKHEQKEISEQQKEKELKEKPVQDQNQGKADVGEPPADEADDEDEWEDASDDEEEIVGEDVSDSEDELKETKDLEEEEEKKKKDGAGVMEDVAKGAEVVQSPCRSPETSVKEQQARKPRETPKLHIPPQDMTMQPKESGSKPLSPFSLDEYHPVKDWAEEMETTSPRATLQLNPLQTVNATKEEQKVEVKSGDSPNVGESDLEAGKEQEAVTDQTSPQNVSGSCDPADEILKEQAELEIDDANKSGDTATIVVTQATTEKQLNQQEANRRTGDVSEPTTRTKPRTDCVEGNEPSSG
SIO_010081: ccdc9
subclass of: SO_0000673
so part of: ccdc9
location: complement(join(2602665..2602669,2606788..2606859,2608183..2608437,2608882..2609401,2612808..2612877,2617487..2617592,2618169..2618213,2620326..2620378,2621674..2621855,2624102..2624299,2629182..2629265,2634455..2634790,2635908..2636051,2636773..2636883,2639302..2639304))
location: region:2602665-2639304:-1
so has part: feature:2639302-2639304:-1:exon
so has part: feature:2636773-2636883:-1:exon
so has part: feature:2635908-2636051:-1:exon
so has part: feature:2634455-2634790:-1:exon
so has part: feature:2629182-2629265:-1:exon
so has part: feature:2624102-2624299:-1:exon
so has part: feature:2621674-2621855:-1:exon
so has part: feature:2620326-2620378:-1:exon
so has part: feature:2618169-2618213:-1:exon
so has part: feature:2617487-2617592:-1:exon
so has part: feature:2612808-2612877:-1:exon
so has part: feature:2608882-2609401:-1:exon
so has part: feature:2608183-2608437:-1:exon
so has part: feature:2606788-2606859:-1:exon
so has part: feature:2602665-2602669:-1:exon

XP_043536673.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2639302-2639304:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2636773-2636883:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2635908-2636051:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2634455-2634790:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2629182-2629265:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2624102-2624299:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2621674-2621855:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2620326-2620378:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2618169-2618213:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2617487-2617592:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2612808-2612877:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2608882-2609401:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2608183-2608437:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2606788-2606859:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2602665-2602669:-1:exon

ccdc9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: ccdc9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 9 isoform X1
translation: MSMTIDPDLKTREEKDAELDRRIEALRKKNQALMKRHQEIEEDRKKAEEDGISVTSRKQKHEAEHERKWGGKEIVMDMADLSKSPAEKWSVSNRKTASSSRGSLEPPGRRSWTSGPRQEAEDRDGHQRSPGSRTDRMMWGDHPNRSPRNVSGHVSPAAERLSRGDRGGRTRRGRAGGGGPDGGGRGLGTASQQERRVKEWEEKRRQNIEKMNEEMEKIAEYERSQMRDPGSSFKDGSGEKNPVRNFLDDPRRLGSLPDCDRKDGSRRHVRNWGGPDFDKVKTGLDRGDKEWQGRRSGSKGSVDMTMSMTGRERAEYVRWKKEREQIDQERLERHRNAMGQWRREWDAEKTESMFKDNPVPTGCAEGYSKRGLRNFKRLNLSAKHTDDRRPPKPPTISDFIPASRSKDPKRGRSKQENKIYSMHDNRWETCEAKHEQKEISEQQKEKELKEKPVQDQNQGKADVGEPPADEADDEDEWEDASDDEEEIVGEDVSDSEDELKETKDLEEEEEKKKKDGAGVMEDVAKGAEVVQSPCRSPETSVKEQQARKPRETPKLHIPPQDMTMQPKESGSKPLSPFSLDEYHPVKDWAEEMETTSPRATLQLNPLQTVNATKEEQKVEVKSGDSPNVGESDLEAGKEQEAVTDQTSPQNVSGSCDPADEILKEQAELEIDDANKSGDTATIVVTQATTEKQLNQQEANRRTGDVSEPTTRTKPRTDCVEGNEPSSG
SIO_010081: ccdc9
subclass of: SO_0000673
so part of: ccdc9
location: complement(join(2602665..2602669,2606788..2606859,2608183..2608437,2608882..2609401,2612808..2612877,2617487..2617592,2618169..2618213,2620326..2620378,2621674..2621855,2624102..2624299,2629182..2629265,2634455..2634790,2635908..2636051,2636773..2636883,2639302..2639304))
location: region:2602665-2639304:-1
so has part: feature:2639302-2639304:-1:exon
so has part: feature:2636773-2636883:-1:exon
so has part: feature:2635908-2636051:-1:exon
so has part: feature:2634455-2634790:-1:exon
so has part: feature:2629182-2629265:-1:exon
so has part: feature:2624102-2624299:-1:exon
so has part: feature:2621674-2621855:-1:exon
so has part: feature:2620326-2620378:-1:exon
so has part: feature:2618169-2618213:-1:exon
so has part: feature:2617487-2617592:-1:exon
so has part: feature:2612808-2612877:-1:exon
so has part: feature:2608882-2609401:-1:exon
so has part: feature:2608183-2608437:-1:exon
so has part: feature:2606788-2606859:-1:exon
so has part: feature:2602665-2602669:-1:exon

XP_043536674.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2639302-2639304:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2636773-2636883:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2635908-2636051:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2634455-2634790:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2629182-2629265:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2624102-2624299:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2621674-2621855:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2620326-2620378:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2618169-2618213:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2617487-2617592:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2612808-2612877:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2608882-2609401:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2608183-2608437:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2606788-2606859:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2602665-2602669:-1:exon

LOC122542748
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: LOC122542748
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2710034..2726588)
location: region:2710034-2726588:-1
so has part: feature:2710034-2726588:-1:exon
subclass of: SO_0000011

122542748
type: Gene
SIO_000068: ncbigene

position:2710034:-1
position: 2710034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2726588:-1
position: 2726588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2710034-2726588:-1:exon

LOC122542748
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 36176
nc RNA class: lncRNA
gene: LOC122542748
product: uncharacterized LOC122542748
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_006309860.1
SIO_010081: LOC122542748
subclass of: SO_0000673
so part of: LOC122542748
location: complement(join(2710034..2710146,2714920..2715053,2726527..2726588))
location: region:2710034-2726588:-1
so has part: feature:2726527-2726588:-1:exon
so has part: feature:2714920-2715053:-1:exon
so has part: feature:2710034-2710146:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2726527-2726588:-1:exon

position:2726527:-1
position: 2726527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2714920-2715053:-1:exon

position:2714920:-1
position: 2714920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2715053:-1
position: 2715053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2710034-2710146:-1:exon

position:2710146:-1
position: 2710146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

pak4
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: pak4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2904025..3035034)
location: region:2904025-3035034:-1
so has part: feature:2904025-3035034:-1:exon
subclass of: SO_0000010

122542744
type: Gene
SIO_000068: ncbigene

position:2904025:-1
position: 2904025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3035034:-1
position: 3035034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2904025-3035034:-1:exon

pak4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: pak4
product: p21 protein (Cdc42/Rac)-activated kinase 4, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680743.1
SIO_010081: pak4
subclass of: SO_0000673
so part of: pak4
location: complement(join(2904025..2904490,2907897..2908031,2909413..2909538,2914231..2914357,2915274..2915407,2920611..2921060,2925750..2926517,2952376..2952600,2956272..2956450,3022009..3022083,3034807..3035034))
location: region:2904025-3035034:-1
so has part: feature:3034807-3035034:-1:exon
so has part: feature:3022009-3022083:-1:exon
so has part: feature:2956272-2956450:-1:exon
so has part: feature:2952376-2952600:-1:exon
so has part: feature:2925750-2926517:-1:exon
so has part: feature:2920611-2921060:-1:exon
so has part: feature:2915274-2915407:-1:exon
so has part: feature:2914231-2914357:-1:exon
so has part: feature:2909413-2909538:-1:exon
so has part: feature:2907897-2908031:-1:exon
so has part: feature:2904025-2904490:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3034807-3035034:-1:exon

position:3034807:-1
position: 3034807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3022009-3022083:-1:exon

position:3022009:-1
position: 3022009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3022083:-1
position: 3022083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2956272-2956450:-1:exon

position:2956272:-1
position: 2956272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2956450:-1
position: 2956450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2952376-2952600:-1:exon

position:2952376:-1
position: 2952376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2952600:-1
position: 2952600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2925750-2926517:-1:exon

position:2925750:-1
position: 2925750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2926517:-1
position: 2926517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2920611-2921060:-1:exon

position:2920611:-1
position: 2920611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2921060:-1
position: 2921060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2915274-2915407:-1:exon

position:2915274:-1
position: 2915274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2915407:-1
position: 2915407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2914231-2914357:-1:exon

position:2914231:-1
position: 2914231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2914357:-1
position: 2914357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2909413-2909538:-1:exon

position:2909413:-1
position: 2909413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2909538:-1
position: 2909538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2907897-2908031:-1:exon

position:2907897:-1
position: 2907897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2908031:-1
position: 2908031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2904025-2904490:-1:exon

position:2904490:-1
position: 2904490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

pak4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: pak4
product: p21 protein (Cdc42/Rac)-activated kinase 4, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680742.1
SIO_010081: pak4
subclass of: SO_0000673
so part of: pak4
location: complement(join(2904025..2904490,2907897..2908031,2909413..2909538,2914231..2914357,2915274..2915407,2920611..2921060,2925750..2926517,2952376..2952600,2956272..2956450,2976993..2977397))
location: region:2904025-2977397:-1
so has part: feature:2976993-2977397:-1:exon
so has part: feature:2956272-2956450:-1:exon
so has part: feature:2952376-2952600:-1:exon
so has part: feature:2925750-2926517:-1:exon
so has part: feature:2920611-2921060:-1:exon
so has part: feature:2915274-2915407:-1:exon
so has part: feature:2914231-2914357:-1:exon
so has part: feature:2909413-2909538:-1:exon
so has part: feature:2907897-2908031:-1:exon
so has part: feature:2904025-2904490:-1:exon

position:2977397:-1
position: 2977397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2976993-2977397:-1:exon

position:2976993:-1
position: 2976993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2956272-2956450:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2952376-2952600:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2925750-2926517:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2920611-2921060:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2915274-2915407:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2914231-2914357:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2909413-2909538:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2907897-2908031:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2904025-2904490:-1:exon

pak4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: pak4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PAK 4
translation: MFGKKKKRVEISAPVNFEHRVHTGFDQQEQKFTGLPRQWESLLEDTAKRPKPLVDPSYITPIQLAPRKAIVRGSKIGIDGSLNWLLDEFENVSVTRSNSLRRGSPPSLLRQEPMQDGMQKNGMHETPPKSTYPTELDRRHDHKGRGERVKQGSRDERDQGRDDRQKNWNAERADSRAHPQQPRGQEPSRTGGSRPNHHNSREARPDHHRHPDNKSKPHDKTDGRRDQPGDREGNHVGFSEPTNSQERASRREKQESSDKRPKSTHTGQTSPQSPRDKRPLSGPNIRPPHAPGGDGAVKTAHQTGRPFNTYPMAETGAGRGSSSQVDHRAGMPHDVRHNGPNLALGHASKAQRGQHRPGHSEPPHQALVPHSSDTHLPRVAQPNSQAPYPAQPQGLESKSPHREPQRVSHQQFKAALQMVVDPGDPRTYLENFIKIGEGSTGIVCIATVKSTGQLVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVEMYNSYLVDDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLKGLAVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKDVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNGQKVSPLLKGFLDRLLVRDPAQRAVASELLKHPFLSKAGLPSCIVLLMRANRIK
SIO_010081: pak4
subclass of: SO_0000673
so part of: pak4
location: complement(join(2904335..2904490,2907897..2908031,2909413..2909538,2914231..2914357,2915274..2915407,2920611..2921060,2925750..2926517,2952376..2952579))
location: region:2904335-2952579:-1
so has part: feature:2952376-2952579:-1:exon
so has part: feature:2925750-2926517:-1:exon
so has part: feature:2920611-2921060:-1:exon
so has part: feature:2915274-2915407:-1:exon
so has part: feature:2914231-2914357:-1:exon
so has part: feature:2909413-2909538:-1:exon
so has part: feature:2907897-2908031:-1:exon
so has part: feature:2904335-2904490:-1:exon

XP_043536677.1
type: Protein
SIO_000068: ncbiprotein

position:2904335:-1
position: 2904335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2952579:-1
position: 2952579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2952376-2952579:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2925750-2926517:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2920611-2921060:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2915274-2915407:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2914231-2914357:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2909413-2909538:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2907897-2908031:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2904335-2904490:-1:exon

pak4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: pak4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PAK 4
translation: MFGKKKKRVEISAPVNFEHRVHTGFDQQEQKFTGLPRQWESLLEDTAKRPKPLVDPSYITPIQLAPRKAIVRGSKIGIDGSLNWLLDEFENVSVTRSNSLRRGSPPSLLRQEPMQDGMQKNGMHETPPKSTYPTELDRRHDHKGRGERVKQGSRDERDQGRDDRQKNWNAERADSRAHPQQPRGQEPSRTGGSRPNHHNSREARPDHHRHPDNKSKPHDKTDGRRDQPGDREGNHVGFSEPTNSQERASRREKQESSDKRPKSTHTGQTSPQSPRDKRPLSGPNIRPPHAPGGDGAVKTAHQTGRPFNTYPMAETGAGRGSSSQVDHRAGMPHDVRHNGPNLALGHASKAQRGQHRPGHSEPPHQALVPHSSDTHLPRVAQPNSQAPYPAQPQGLESKSPHREPQRVSHQQFKAALQMVVDPGDPRTYLENFIKIGEGSTGIVCIATVKSTGQLVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVEMYNSYLVDDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLKGLAVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKDVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNGQKVSPLLKGFLDRLLVRDPAQRAVASELLKHPFLSKAGLPSCIVLLMRANRIK
SIO_010081: pak4
subclass of: SO_0000673
so part of: pak4
location: complement(join(2904335..2904490,2907897..2908031,2909413..2909538,2914231..2914357,2915274..2915407,2920611..2921060,2925750..2926517,2952376..2952579))
location: region:2904335-2952579:-1
so has part: feature:2952376-2952579:-1:exon
so has part: feature:2925750-2926517:-1:exon
so has part: feature:2920611-2921060:-1:exon
so has part: feature:2915274-2915407:-1:exon
so has part: feature:2914231-2914357:-1:exon
so has part: feature:2909413-2909538:-1:exon
so has part: feature:2907897-2908031:-1:exon
so has part: feature:2904335-2904490:-1:exon

XP_043536678.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2952376-2952579:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2925750-2926517:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2920611-2921060:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2915274-2915407:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2914231-2914357:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2909413-2909538:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2907897-2908031:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2904335-2904490:-1:exon

LOC122542742
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: LOC122542742
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3059082..3172264)
location: region:3059082-3172264:-1
so has part: feature:3059082-3172264:-1:exon
subclass of: SO_0000010

122542742
type: Gene
SIO_000068: ncbigene

position:3059082:-1
position: 3059082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3172264:-1
position: 3172264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3059082-3172264:-1:exon

LOC122542742
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542742
product: alpha-actinin-1-like, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680734.1
SIO_010081: LOC122542742
subclass of: SO_0000673
so part of: LOC122542742
location: complement(join(3059082..3061450,3065357..3065515,3067531..3067596,3073585..3073731,3076372..3076551,3079283..3079417,3079705..3079887,3080126..3080266,3081575..3081683,3081958..3082108,3086473..3086620,3088726..3088956,3090402..3090494,3093665..3093750,3102416..3102497,3102724..3102802,3106308..3106395,3108962..3109048,3111937..3112056,3114839..3114953,3171704..3172264))
location: region:3059082-3172264:-1
so has part: feature:3171704-3172264:-1:exon
so has part: feature:3114839-3114953:-1:exon
so has part: feature:3111937-3112056:-1:exon
so has part: feature:3108962-3109048:-1:exon
so has part: feature:3106308-3106395:-1:exon
so has part: feature:3102724-3102802:-1:exon
so has part: feature:3102416-3102497:-1:exon
so has part: feature:3093665-3093750:-1:exon
so has part: feature:3090402-3090494:-1:exon
so has part: feature:3088726-3088956:-1:exon
so has part: feature:3086473-3086620:-1:exon
so has part: feature:3081958-3082108:-1:exon
so has part: feature:3081575-3081683:-1:exon
so has part: feature:3080126-3080266:-1:exon
so has part: feature:3079705-3079887:-1:exon
so has part: feature:3079283-3079417:-1:exon
so has part: feature:3076372-3076551:-1:exon
so has part: feature:3073585-3073731:-1:exon
so has part: feature:3067531-3067596:-1:exon
so has part: feature:3065357-3065515:-1:exon
so has part: feature:3059082-3061450:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3171704-3172264:-1:exon

position:3171704:-1
position: 3171704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3114839-3114953:-1:exon

position:3114839:-1
position: 3114839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3114953:-1
position: 3114953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3111937-3112056:-1:exon

position:3111937:-1
position: 3111937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3112056:-1
position: 3112056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3108962-3109048:-1:exon

position:3108962:-1
position: 3108962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3109048:-1
position: 3109048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3106308-3106395:-1:exon

position:3106308:-1
position: 3106308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3106395:-1
position: 3106395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3102724-3102802:-1:exon

position:3102724:-1
position: 3102724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3102802:-1
position: 3102802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3102416-3102497:-1:exon

position:3102416:-1
position: 3102416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3102497:-1
position: 3102497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3093665-3093750:-1:exon

position:3093665:-1
position: 3093665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3093750:-1
position: 3093750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3090402-3090494:-1:exon

position:3090402:-1
position: 3090402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3090494:-1
position: 3090494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3088726-3088956:-1:exon

position:3088726:-1
position: 3088726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3088956:-1
position: 3088956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3086473-3086620:-1:exon

position:3086473:-1
position: 3086473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3086620:-1
position: 3086620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3081958-3082108:-1:exon

position:3081958:-1
position: 3081958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3082108:-1
position: 3082108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3081575-3081683:-1:exon

position:3081575:-1
position: 3081575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3081683:-1
position: 3081683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3080126-3080266:-1:exon

position:3080126:-1
position: 3080126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3080266:-1
position: 3080266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3079705-3079887:-1:exon

position:3079705:-1
position: 3079705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3079887:-1
position: 3079887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3079283-3079417:-1:exon

position:3079283:-1
position: 3079283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3079417:-1
position: 3079417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3076372-3076551:-1:exon

position:3076372:-1
position: 3076372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3076551:-1
position: 3076551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3073585-3073731:-1:exon

position:3073585:-1
position: 3073585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3073731:-1
position: 3073731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3067531-3067596:-1:exon

position:3067531:-1
position: 3067531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3067596:-1
position: 3067596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3065357-3065515:-1:exon

position:3065357:-1
position: 3065357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3065515:-1
position: 3065515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3059082-3061450:-1:exon

position:3061450:-1
position: 3061450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC122542742
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542742
product: alpha-actinin-1-like, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680733.1
SIO_010081: LOC122542742
subclass of: SO_0000673
so part of: LOC122542742
location: complement(join(3059082..3061450,3065357..3065515,3067531..3067596,3073585..3073731,3076372..3076551,3079283..3079417,3079705..3079887,3080126..3080266,3081575..3081683,3081958..3082108,3086473..3086620,3088726..3088956,3090402..3090494,3093948..3094033,3102416..3102497,3102724..3102802,3106308..3106395,3108962..3109048,3111937..3112056,3114839..3114953,3171704..3172263))
location: region:3059082-3172263:-1
so has part: feature:3171704-3172263:-1:exon
so has part: feature:3114839-3114953:-1:exon
so has part: feature:3111937-3112056:-1:exon
so has part: feature:3108962-3109048:-1:exon
so has part: feature:3106308-3106395:-1:exon
so has part: feature:3102724-3102802:-1:exon
so has part: feature:3102416-3102497:-1:exon
so has part: feature:3093948-3094033:-1:exon
so has part: feature:3090402-3090494:-1:exon
so has part: feature:3088726-3088956:-1:exon
so has part: feature:3086473-3086620:-1:exon
so has part: feature:3081958-3082108:-1:exon
so has part: feature:3081575-3081683:-1:exon
so has part: feature:3080126-3080266:-1:exon
so has part: feature:3079705-3079887:-1:exon
so has part: feature:3079283-3079417:-1:exon
so has part: feature:3076372-3076551:-1:exon
so has part: feature:3073585-3073731:-1:exon
so has part: feature:3067531-3067596:-1:exon
so has part: feature:3065357-3065515:-1:exon
so has part: feature:3059082-3061450:-1:exon

position:3172263:-1
position: 3172263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3171704-3172263:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3114839-3114953:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3111937-3112056:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3108962-3109048:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3106308-3106395:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3102724-3102802:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3102416-3102497:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3093948-3094033:-1:exon

position:3093948:-1
position: 3093948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3094033:-1
position: 3094033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3090402-3090494:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3088726-3088956:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3086473-3086620:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3081958-3082108:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3081575-3081683:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3080126-3080266:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3079705-3079887:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3079283-3079417:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3076372-3076551:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3073585-3073731:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3067531-3067596:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3065357-3065515:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3059082-3061450:-1:exon

LOC122542742
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542742
product: alpha-actinin-1-like, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680735.1
SIO_010081: LOC122542742
subclass of: SO_0000673
so part of: LOC122542742
location: complement(join(3059082..3061450,3065357..3065515,3067531..3067596,3067834..3067914,3073585..3073731,3076372..3076551,3079283..3079417,3079705..3079887,3080126..3080266,3081575..3081683,3081958..3082108,3086473..3086620,3088726..3088956,3090402..3090494,3093948..3094033,3102416..3102497,3102724..3102802,3106308..3106395,3108962..3109048,3111937..3112056,3114839..3114953,3171704..3172263))
location: region:3059082-3172263:-1
so has part: feature:3171704-3172263:-1:exon
so has part: feature:3114839-3114953:-1:exon
so has part: feature:3111937-3112056:-1:exon
so has part: feature:3108962-3109048:-1:exon
so has part: feature:3106308-3106395:-1:exon
so has part: feature:3102724-3102802:-1:exon
so has part: feature:3102416-3102497:-1:exon
so has part: feature:3093948-3094033:-1:exon
so has part: feature:3090402-3090494:-1:exon
so has part: feature:3088726-3088956:-1:exon
so has part: feature:3086473-3086620:-1:exon
so has part: feature:3081958-3082108:-1:exon
so has part: feature:3081575-3081683:-1:exon
so has part: feature:3080126-3080266:-1:exon
so has part: feature:3079705-3079887:-1:exon
so has part: feature:3079283-3079417:-1:exon
so has part: feature:3076372-3076551:-1:exon
so has part: feature:3073585-3073731:-1:exon
so has part: feature:3067834-3067914:-1:exon
so has part: feature:3067531-3067596:-1:exon
so has part: feature:3065357-3065515:-1:exon
so has part: feature:3059082-3061450:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3171704-3172263:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3114839-3114953:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3111937-3112056:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3108962-3109048:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3106308-3106395:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3102724-3102802:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3102416-3102497:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3093948-3094033:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3090402-3090494:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3088726-3088956:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3086473-3086620:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3081958-3082108:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3081575-3081683:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3080126-3080266:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3079705-3079887:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3079283-3079417:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3076372-3076551:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3073585-3073731:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3067834-3067914:-1:exon

position:3067834:-1
position: 3067834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3067914:-1
position: 3067914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3067531-3067596:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3065357-3065515:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3059082-3061450:-1:exon

LOC122542742
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542742
product: alpha-actinin-1-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680731.1
SIO_010081: LOC122542742
subclass of: SO_0000673
so part of: LOC122542742
location: complement(join(3059082..3061450,3065357..3065515,3067834..3067914,3073585..3073731,3076372..3076551,3079283..3079417,3079705..3079887,3080126..3080266,3081575..3081683,3081958..3082108,3086473..3086620,3088726..3088956,3090402..3090494,3093665..3093750,3102416..3102497,3102724..3102802,3106308..3106395,3108962..3109048,3111937..3112056,3114839..3114953,3171704..3172261))
location: region:3059082-3172261:-1
so has part: feature:3171704-3172261:-1:exon
so has part: feature:3114839-3114953:-1:exon
so has part: feature:3111937-3112056:-1:exon
so has part: feature:3108962-3109048:-1:exon
so has part: feature:3106308-3106395:-1:exon
so has part: feature:3102724-3102802:-1:exon
so has part: feature:3102416-3102497:-1:exon
so has part: feature:3093665-3093750:-1:exon
so has part: feature:3090402-3090494:-1:exon
so has part: feature:3088726-3088956:-1:exon
so has part: feature:3086473-3086620:-1:exon
so has part: feature:3081958-3082108:-1:exon
so has part: feature:3081575-3081683:-1:exon
so has part: feature:3080126-3080266:-1:exon
so has part: feature:3079705-3079887:-1:exon
so has part: feature:3079283-3079417:-1:exon
so has part: feature:3076372-3076551:-1:exon
so has part: feature:3073585-3073731:-1:exon
so has part: feature:3067834-3067914:-1:exon
so has part: feature:3065357-3065515:-1:exon
so has part: feature:3059082-3061450:-1:exon

position:3172261:-1
position: 3172261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3171704-3172261:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3114839-3114953:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3111937-3112056:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3108962-3109048:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3106308-3106395:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3102724-3102802:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3102416-3102497:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3093665-3093750:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3090402-3090494:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3088726-3088956:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3086473-3086620:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3081958-3082108:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3081575-3081683:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3080126-3080266:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3079705-3079887:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3079283-3079417:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3076372-3076551:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3073585-3073731:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3067834-3067914:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3065357-3065515:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3059082-3061450:-1:exon

LOC122542742
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542742
product: alpha-actinin-1-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680730.1
SIO_010081: LOC122542742
subclass of: SO_0000673
so part of: LOC122542742
location: complement(join(3059082..3061450,3065357..3065515,3067834..3067914,3073585..3073731,3076372..3076551,3079283..3079417,3079705..3079887,3080126..3080266,3081575..3081683,3081958..3082108,3086473..3086620,3088726..3088956,3090402..3090494,3093948..3094033,3102416..3102497,3102724..3102802,3106308..3106395,3108962..3109048,3111937..3112056,3114839..3114953,3171704..3172261))
location: region:3059082-3172261:-1
so has part: feature:3171704-3172261:-1:exon
so has part: feature:3114839-3114953:-1:exon
so has part: feature:3111937-3112056:-1:exon
so has part: feature:3108962-3109048:-1:exon
so has part: feature:3106308-3106395:-1:exon
so has part: feature:3102724-3102802:-1:exon
so has part: feature:3102416-3102497:-1:exon
so has part: feature:3093948-3094033:-1:exon
so has part: feature:3090402-3090494:-1:exon
so has part: feature:3088726-3088956:-1:exon
so has part: feature:3086473-3086620:-1:exon
so has part: feature:3081958-3082108:-1:exon
so has part: feature:3081575-3081683:-1:exon
so has part: feature:3080126-3080266:-1:exon
so has part: feature:3079705-3079887:-1:exon
so has part: feature:3079283-3079417:-1:exon
so has part: feature:3076372-3076551:-1:exon
so has part: feature:3073585-3073731:-1:exon
so has part: feature:3067834-3067914:-1:exon
so has part: feature:3065357-3065515:-1:exon
so has part: feature:3059082-3061450:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3171704-3172261:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3114839-3114953:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3111937-3112056:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3108962-3109048:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3106308-3106395:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3102724-3102802:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3102416-3102497:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3093948-3094033:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3090402-3090494:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3088726-3088956:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3086473-3086620:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3081958-3082108:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3081575-3081683:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3080126-3080266:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3079705-3079887:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3079283-3079417:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3076372-3076551:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3073585-3073731:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3067834-3067914:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3065357-3065515:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3059082-3061450:-1:exon

LOC122542742
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542742
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-actinin-1-like isoform X4
translation: MVDYHEANSQLQQPNHGDYMQPEEDWDRDLLLDPAWERQQRKTFTAWCNSHLRKAGTQIEVIEEDFRDGLKLMLLLEVISGERLPKPERGKMRVHKINNVNKALDFIASKGVKLVSIGAEEIVDGNVKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNVQNFHISWKDGLAFNALIHRHRPELIDYDKLRKDDPLTNLNNAFEVAETHLDIPKMLDAEDIVGTLRPDEKAIMTYVSCYYHAFSGAQKAETAANRICKVLAVNQENEHLMEDYEKLASDLLEWIRQTKPWLENREPEKTMQAMQQKLEDFRDYRRVHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKMVSDINNAWQGLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKATIHEDWTKDKEAMLTQKDYETATLADIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNDLDYYDSPNVNARCQTICDHWDTLGSLTQSRRDALERTEKLQETIDQLYLEYAKRAAPFNNWMEGAMEDLQDMFIVHTTEEIQGLIAAHEQFKATLPDADKEREAILGIHNEMMKIAQSYNIKLSGVNPYTSITSQSINDKWDKVQQFVPARDQALQAEFNKQQSNEHLREQFANKANVVGPWIQTKMQEIGRISIEMHGTLEDQLNQLKQYESSIINYKPNIEKLEQDHQLIQEALIFDNKHTNYTMEHIRVGWEQLLTTIARTINEIENQILTRDAKGISQDQLNEFRSSFNHFDKKRTGLMDADDFRALLISTGYSLGEAEFARIMSIVAPNNTEEVSFQAFIDFMSRETTDTDTAEQVMASFKILAGDKSYITAEELRRELPPDQAEYCIARMAPYRGPDAVPGALDYMSFSTALYGESDL
SIO_010081: LOC122542742
subclass of: SO_0000673
so part of: LOC122542742
location: complement(join(3061292..3061450,3065357..3065515,3067531..3067596,3073585..3073731,3076372..3076551,3079283..3079417,3079705..3079887,3080126..3080266,3081575..3081683,3081958..3082108,3086473..3086620,3088726..3088956,3090402..3090494,3093665..3093750,3102416..3102497,3102724..3102802,3106308..3106395,3108962..3109048,3111937..3112056,3114839..3114953,3171704..3171829))
location: region:3061292-3171829:-1
so has part: feature:3171704-3171829:-1:exon
so has part: feature:3114839-3114953:-1:exon
so has part: feature:3111937-3112056:-1:exon
so has part: feature:3108962-3109048:-1:exon
so has part: feature:3106308-3106395:-1:exon
so has part: feature:3102724-3102802:-1:exon
so has part: feature:3102416-3102497:-1:exon
so has part: feature:3093665-3093750:-1:exon
so has part: feature:3090402-3090494:-1:exon
so has part: feature:3088726-3088956:-1:exon
so has part: feature:3086473-3086620:-1:exon
so has part: feature:3081958-3082108:-1:exon
so has part: feature:3081575-3081683:-1:exon
so has part: feature:3080126-3080266:-1:exon
so has part: feature:3079705-3079887:-1:exon
so has part: feature:3079283-3079417:-1:exon
so has part: feature:3076372-3076551:-1:exon
so has part: feature:3073585-3073731:-1:exon
so has part: feature:3067531-3067596:-1:exon
so has part: feature:3065357-3065515:-1:exon
so has part: feature:3061292-3061450:-1:exon

XP_043536669.1
type: Protein
SIO_000068: ncbiprotein

position:3061292:-1
position: 3061292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3171829:-1
position: 3171829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3171704-3171829:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3114839-3114953:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3111937-3112056:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3108962-3109048:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3106308-3106395:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3102724-3102802:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3102416-3102497:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3093665-3093750:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3090402-3090494:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3088726-3088956:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3086473-3086620:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3081958-3082108:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3081575-3081683:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3080126-3080266:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3079705-3079887:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3079283-3079417:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3076372-3076551:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3073585-3073731:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3067531-3067596:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3065357-3065515:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3061292-3061450:-1:exon

LOC122542742
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542742
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-actinin-1-like isoform X2
translation: MVDYHEANSQLQQPNHGDYMQPEEDWDRDLLLDPAWERQQRKTFTAWCNSHLRKAGTQIEVIEEDFRDGLKLMLLLEVISGERLPKPERGKMRVHKINNVNKALDFIASKGVKLVSIGAEEIVDGNVKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNVQNFHISWKDGLAFNALIHRHRPELIDYDKLRKDDPLTNLNNAFEVAETHLDIPKMLDAEDIVGTLRPDEKAIMTYVSCYYHAFSGAQKAETAANRICKVLAVNQENEHLMEDYEKLASDLLEWIRQTKPWLENREPEKTMQAMQQKLEDFRDYRRVHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKMVSDINNAWQGLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKATIHEDWTKDKEAMLTQKDYETATLADIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNDLDYYDSPNVNARCQTICDHWDTLGSLTQSRRDALERTEKLQETIDQLYLEYAKRAAPFNNWMEGAMEDLQDMFIVHTTEEIQGLIAAHEQFKATLPDADKEREAILGIHNEMMKIAQSYNIKLSGVNPYTSITSQSINDKWDKVQQFVPARDQALQAEFNKQQSNEHLREQFANKANVVGPWIQTKMQEIGRISIEMHGTLEDQLNQLKQYESSIINYKPNIEKLEQDHQLIQEALIFDNKHTNYTMEHIRVGWEQLLTTIARTINEIENQILTRDAKGISQDQLNEFRSSFNHFDKDHTGKLGPEEFKACLISLGYDVGNDQQGEAEFARIMSIVAPNNTEEVSFQAFIDFMSRETTDTDTAEQVMASFKILAGDKSYITAEELRRELPPDQAEYCIARMAPYRGPDAVPGALDYMSFSTALYGESDL
SIO_010081: LOC122542742
subclass of: SO_0000673
so part of: LOC122542742
location: complement(join(3061292..3061450,3065357..3065515,3067834..3067914,3073585..3073731,3076372..3076551,3079283..3079417,3079705..3079887,3080126..3080266,3081575..3081683,3081958..3082108,3086473..3086620,3088726..3088956,3090402..3090494,3093665..3093750,3102416..3102497,3102724..3102802,3106308..3106395,3108962..3109048,3111937..3112056,3114839..3114953,3171704..3171829))
location: region:3061292-3171829:-1
so has part: feature:3171704-3171829:-1:exon
so has part: feature:3114839-3114953:-1:exon
so has part: feature:3111937-3112056:-1:exon
so has part: feature:3108962-3109048:-1:exon
so has part: feature:3106308-3106395:-1:exon
so has part: feature:3102724-3102802:-1:exon
so has part: feature:3102416-3102497:-1:exon
so has part: feature:3093665-3093750:-1:exon
so has part: feature:3090402-3090494:-1:exon
so has part: feature:3088726-3088956:-1:exon
so has part: feature:3086473-3086620:-1:exon
so has part: feature:3081958-3082108:-1:exon
so has part: feature:3081575-3081683:-1:exon
so has part: feature:3080126-3080266:-1:exon
so has part: feature:3079705-3079887:-1:exon
so has part: feature:3079283-3079417:-1:exon
so has part: feature:3076372-3076551:-1:exon
so has part: feature:3073585-3073731:-1:exon
so has part: feature:3067834-3067914:-1:exon
so has part: feature:3065357-3065515:-1:exon
so has part: feature:3061292-3061450:-1:exon

XP_043536666.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3171704-3171829:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3114839-3114953:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3111937-3112056:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3108962-3109048:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3106308-3106395:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3102724-3102802:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3102416-3102497:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3093665-3093750:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3090402-3090494:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3088726-3088956:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3086473-3086620:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3081958-3082108:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3081575-3081683:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3080126-3080266:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3079705-3079887:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3079283-3079417:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3076372-3076551:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3073585-3073731:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3067834-3067914:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3065357-3065515:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3061292-3061450:-1:exon

LOC122542742
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542742
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-actinin-1-like isoform X3
translation: MVDYHEANSQLQQPNHGDYMQPEEDWDRDLLLDPAWERQQRKTFTAWCNSHLRKAGTQIEVIEEDFRDGLKLMLLLEVISGERLPKPERGKMRVHKINNVNKALDFIASKGVKLVSIGAEEIVDGNVKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNVQNFHISWKDGLAFNALIHRHRPELIDYDKLRKDDPLTNLNNAFEVAETHLDIPKMLDAEDIVNTARPDEKAIMTYVSCFYHAFSGAQKAETAANRICKVLAVNQENEHLMEDYEKLASDLLEWIRQTKPWLENREPEKTMQAMQQKLEDFRDYRRVHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKMVSDINNAWQGLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKATIHEDWTKDKEAMLTQKDYETATLADIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNDLDYYDSPNVNARCQTICDHWDTLGSLTQSRRDALERTEKLQETIDQLYLEYAKRAAPFNNWMEGAMEDLQDMFIVHTTEEIQGLIAAHEQFKATLPDADKEREAILGIHNEMMKIAQSYNIKLSGVNPYTSITSQSINDKWDKVQQFVPARDQALQAEFNKQQSNEHLREQFANKANVVGPWIQTKMQEIGRISIEMHGTLEDQLNQLKQYESSIINYKPNIEKLEQDHQLIQEALIFDNKHTNYTMEHIRVGWEQLLTTIARTINEIENQILTRDAKGISQDQLNEFRSSFNHFDKKRTGLMDADDFRALLISTGYSLGEAEFARIMSIVAPNNTEEVSFQAFIDFMSRETTDTDTAEQVMASFKILAGDKSYITAEELRRELPPDQAEYCIARMAPYRGPDAVPGALDYMSFSTALYGESDL
SIO_010081: LOC122542742
subclass of: SO_0000673
so part of: LOC122542742
location: complement(join(3061292..3061450,3065357..3065515,3067531..3067596,3073585..3073731,3076372..3076551,3079283..3079417,3079705..3079887,3080126..3080266,3081575..3081683,3081958..3082108,3086473..3086620,3088726..3088956,3090402..3090494,3093948..3094033,3102416..3102497,3102724..3102802,3106308..3106395,3108962..3109048,3111937..3112056,3114839..3114953,3171704..3171829))
location: region:3061292-3171829:-1
so has part: feature:3171704-3171829:-1:exon
so has part: feature:3114839-3114953:-1:exon
so has part: feature:3111937-3112056:-1:exon
so has part: feature:3108962-3109048:-1:exon
so has part: feature:3106308-3106395:-1:exon
so has part: feature:3102724-3102802:-1:exon
so has part: feature:3102416-3102497:-1:exon
so has part: feature:3093948-3094033:-1:exon
so has part: feature:3090402-3090494:-1:exon
so has part: feature:3088726-3088956:-1:exon
so has part: feature:3086473-3086620:-1:exon
so has part: feature:3081958-3082108:-1:exon
so has part: feature:3081575-3081683:-1:exon
so has part: feature:3080126-3080266:-1:exon
so has part: feature:3079705-3079887:-1:exon
so has part: feature:3079283-3079417:-1:exon
so has part: feature:3076372-3076551:-1:exon
so has part: feature:3073585-3073731:-1:exon
so has part: feature:3067531-3067596:-1:exon
so has part: feature:3065357-3065515:-1:exon
so has part: feature:3061292-3061450:-1:exon

XP_043536668.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3171704-3171829:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3114839-3114953:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3111937-3112056:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3108962-3109048:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3106308-3106395:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3102724-3102802:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3102416-3102497:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3093948-3094033:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3090402-3090494:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3088726-3088956:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3086473-3086620:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3081958-3082108:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3081575-3081683:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3080126-3080266:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3079705-3079887:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3079283-3079417:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3076372-3076551:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3073585-3073731:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3067531-3067596:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3065357-3065515:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3061292-3061450:-1:exon

LOC122542742
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542742
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-actinin-1-like isoform X1
translation: MVDYHEANSQLQQPNHGDYMQPEEDWDRDLLLDPAWERQQRKTFTAWCNSHLRKAGTQIEVIEEDFRDGLKLMLLLEVISGERLPKPERGKMRVHKINNVNKALDFIASKGVKLVSIGAEEIVDGNVKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNVQNFHISWKDGLAFNALIHRHRPELIDYDKLRKDDPLTNLNNAFEVAETHLDIPKMLDAEDIVNTARPDEKAIMTYVSCFYHAFSGAQKAETAANRICKVLAVNQENEHLMEDYEKLASDLLEWIRQTKPWLENREPEKTMQAMQQKLEDFRDYRRVHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKMVSDINNAWQGLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKATIHEDWTKDKEAMLTQKDYETATLADIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNDLDYYDSPNVNARCQTICDHWDTLGSLTQSRRDALERTEKLQETIDQLYLEYAKRAAPFNNWMEGAMEDLQDMFIVHTTEEIQGLIAAHEQFKATLPDADKEREAILGIHNEMMKIAQSYNIKLSGVNPYTSITSQSINDKWDKVQQFVPARDQALQAEFNKQQSNEHLREQFANKANVVGPWIQTKMQEIGRISIEMHGTLEDQLNQLKQYESSIINYKPNIEKLEQDHQLIQEALIFDNKHTNYTMEHIRVGWEQLLTTIARTINEIENQILTRDAKGISQDQLNEFRSSFNHFDKDHTGKLGPEEFKACLISLGYDVGNDQQGEAEFARIMSIVAPNNTEEVSFQAFIDFMSRETTDTDTAEQVMASFKILAGDKSYITAEELRRELPPDQAEYCIARMAPYRGPDAVPGALDYMSFSTALYGESDL
SIO_010081: LOC122542742
subclass of: SO_0000673
so part of: LOC122542742
location: complement(join(3061292..3061450,3065357..3065515,3067834..3067914,3073585..3073731,3076372..3076551,3079283..3079417,3079705..3079887,3080126..3080266,3081575..3081683,3081958..3082108,3086473..3086620,3088726..3088956,3090402..3090494,3093948..3094033,3102416..3102497,3102724..3102802,3106308..3106395,3108962..3109048,3111937..3112056,3114839..3114953,3171704..3171829))
location: region:3061292-3171829:-1
so has part: feature:3171704-3171829:-1:exon
so has part: feature:3114839-3114953:-1:exon
so has part: feature:3111937-3112056:-1:exon
so has part: feature:3108962-3109048:-1:exon
so has part: feature:3106308-3106395:-1:exon
so has part: feature:3102724-3102802:-1:exon
so has part: feature:3102416-3102497:-1:exon
so has part: feature:3093948-3094033:-1:exon
so has part: feature:3090402-3090494:-1:exon
so has part: feature:3088726-3088956:-1:exon
so has part: feature:3086473-3086620:-1:exon
so has part: feature:3081958-3082108:-1:exon
so has part: feature:3081575-3081683:-1:exon
so has part: feature:3080126-3080266:-1:exon
so has part: feature:3079705-3079887:-1:exon
so has part: feature:3079283-3079417:-1:exon
so has part: feature:3076372-3076551:-1:exon
so has part: feature:3073585-3073731:-1:exon
so has part: feature:3067834-3067914:-1:exon
so has part: feature:3065357-3065515:-1:exon
so has part: feature:3061292-3061450:-1:exon

XP_043536665.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3171704-3171829:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3114839-3114953:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3111937-3112056:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3108962-3109048:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3106308-3106395:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3102724-3102802:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3102416-3102497:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3093948-3094033:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3090402-3090494:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3088726-3088956:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3086473-3086620:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3081958-3082108:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3081575-3081683:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3080126-3080266:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3079705-3079887:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3079283-3079417:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3076372-3076551:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3073585-3073731:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3067834-3067914:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3065357-3065515:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3061292-3061450:-1:exon

LOC122542742
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542742
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-actinin-1-like isoform X5
translation: MVDYHEANSQLQQPNHGDYMQPEEDWDRDLLLDPAWERQQRKTFTAWCNSHLRKAGTQIEVIEEDFRDGLKLMLLLEVISGERLPKPERGKMRVHKINNVNKALDFIASKGVKLVSIGAEEIVDGNVKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNVQNFHISWKDGLAFNALIHRHRPELIDYDKLRKDDPLTNLNNAFEVAETHLDIPKMLDAEDIVNTARPDEKAIMTYVSCFYHAFSGAQKAETAANRICKVLAVNQENEHLMEDYEKLASDLLEWIRQTKPWLENREPEKTMQAMQQKLEDFRDYRRVHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKMVSDINNAWQGLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKATIHEDWTKDKEAMLTQKDYETATLADIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNDLDYYDSPNVNARCQTICDHWDTLGSLTQSRRDALERTEKLQETIDQLYLEYAKRAAPFNNWMEGAMEDLQDMFIVHTTEEIQGLIAAHEQFKATLPDADKEREAILGIHNEMMKIAQSYNIKLSGVNPYTSITSQSINDKWDKVQQFVPARDQALQAEFNKQQSNEHLREQFANKANVVGPWIQTKMQEIGRISIEMHGTLEDQLNQLKQYESSIINYKPNIEKLEQDHQLIQEALIFDNKHTNYTMEHIRVGWEQLLTTIARTINEIENQILTRDAKGISQDQLNEFRSSFNHFDKDHTGKLGPEEFKACLISLGYDVGNDQQKRTGLMDADDFRALLISTGYSLGEAEFARIMSIVAPNNTEEVSFQAFIDFMSRETTDTDTAEQVMASFKILAGDKSYITAEELRRELPPDQAEYCIARMAPYRGPDAVPGALDYMSFSTALYGESDL
SIO_010081: LOC122542742
subclass of: SO_0000673
so part of: LOC122542742
location: complement(join(3061292..3061450,3065357..3065515,3067531..3067596,3067834..3067914,3073585..3073731,3076372..3076551,3079283..3079417,3079705..3079887,3080126..3080266,3081575..3081683,3081958..3082108,3086473..3086620,3088726..3088956,3090402..3090494,3093948..3094033,3102416..3102497,3102724..3102802,3106308..3106395,3108962..3109048,3111937..3112056,3114839..3114953,3171704..3171829))
location: region:3061292-3171829:-1
so has part: feature:3171704-3171829:-1:exon
so has part: feature:3114839-3114953:-1:exon
so has part: feature:3111937-3112056:-1:exon
so has part: feature:3108962-3109048:-1:exon
so has part: feature:3106308-3106395:-1:exon
so has part: feature:3102724-3102802:-1:exon
so has part: feature:3102416-3102497:-1:exon
so has part: feature:3093948-3094033:-1:exon
so has part: feature:3090402-3090494:-1:exon
so has part: feature:3088726-3088956:-1:exon
so has part: feature:3086473-3086620:-1:exon
so has part: feature:3081958-3082108:-1:exon
so has part: feature:3081575-3081683:-1:exon
so has part: feature:3080126-3080266:-1:exon
so has part: feature:3079705-3079887:-1:exon
so has part: feature:3079283-3079417:-1:exon
so has part: feature:3076372-3076551:-1:exon
so has part: feature:3073585-3073731:-1:exon
so has part: feature:3067834-3067914:-1:exon
so has part: feature:3067531-3067596:-1:exon
so has part: feature:3065357-3065515:-1:exon
so has part: feature:3061292-3061450:-1:exon

XP_043536670.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3171704-3171829:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3114839-3114953:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3111937-3112056:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3108962-3109048:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3106308-3106395:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3102724-3102802:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3102416-3102497:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3093948-3094033:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3090402-3090494:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3088726-3088956:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3086473-3086620:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3081958-3082108:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3081575-3081683:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3080126-3080266:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3079705-3079887:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3079283-3079417:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3076372-3076551:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3073585-3073731:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3067834-3067914:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3067531-3067596:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3065357-3065515:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3061292-3061450:-1:exon

LOC122542749
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: LOC122542749
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3232674..3273042)
location: region:3232674-3273042:-1
so has part: feature:3232674-3273042:-1:exon
subclass of: SO_0000010

122542749
type: Gene
SIO_000068: ncbigene

position:3232674:-1
position: 3232674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3273042:-1
position: 3273042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3232674-3273042:-1:exon

LOC122542749
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542749
product: calpain-3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_043680749.1
SIO_010081: LOC122542749
subclass of: SO_0000673
so part of: LOC122542749
location: complement(join(3232674..3232918,3233829..3233887,3249776..3249892,3250637..3250715,3251783..3251851,3253390..3253454,3254117..3254177,3254519..3254596,3255310..3255349,3260553..3260761,3261205..3261377,3262585..3262751,3263396..3263467,3265191..3265276,3270046..3270117,3271529..3271697,3272558..3272691,3272926..3273042))
location: region:3232674-3273042:-1
so has part: feature:3272926-3273042:-1:exon
so has part: feature:3272558-3272691:-1:exon
so has part: feature:3271529-3271697:-1:exon
so has part: feature:3270046-3270117:-1:exon
so has part: feature:3265191-3265276:-1:exon
so has part: feature:3263396-3263467:-1:exon
so has part: feature:3262585-3262751:-1:exon
so has part: feature:3261205-3261377:-1:exon
so has part: feature:3260553-3260761:-1:exon
so has part: feature:3255310-3255349:-1:exon
so has part: feature:3254519-3254596:-1:exon
so has part: feature:3254117-3254177:-1:exon
so has part: feature:3253390-3253454:-1:exon
so has part: feature:3251783-3251851:-1:exon
so has part: feature:3250637-3250715:-1:exon
so has part: feature:3249776-3249892:-1:exon
so has part: feature:3233829-3233887:-1:exon
so has part: feature:3232674-3232918:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3272926-3273042:-1:exon

position:3272926:-1
position: 3272926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3272558-3272691:-1:exon

position:3272558:-1
position: 3272558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3272691:-1
position: 3272691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3271529-3271697:-1:exon

position:3271529:-1
position: 3271529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3271697:-1
position: 3271697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3270046-3270117:-1:exon

position:3270046:-1
position: 3270046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3270117:-1
position: 3270117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3265191-3265276:-1:exon

position:3265191:-1
position: 3265191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3265276:-1
position: 3265276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3263396-3263467:-1:exon

position:3263396:-1
position: 3263396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3263467:-1
position: 3263467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3262585-3262751:-1:exon

position:3262585:-1
position: 3262585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3262751:-1
position: 3262751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3261205-3261377:-1:exon

position:3261205:-1
position: 3261205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3261377:-1
position: 3261377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3260553-3260761:-1:exon

position:3260553:-1
position: 3260553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3260761:-1
position: 3260761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3255310-3255349:-1:exon

position:3255310:-1
position: 3255310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3255349:-1
position: 3255349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3254519-3254596:-1:exon

position:3254519:-1
position: 3254519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3254596:-1
position: 3254596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3254117-3254177:-1:exon

position:3254117:-1
position: 3254117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3254177:-1
position: 3254177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3253390-3253454:-1:exon

position:3253390:-1
position: 3253390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3253454:-1
position: 3253454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3251783-3251851:-1:exon

position:3251783:-1
position: 3251783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3251851:-1
position: 3251851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3250637-3250715:-1:exon

position:3250637:-1
position: 3250637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3250715:-1
position: 3250715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3249776-3249892:-1:exon

position:3249776:-1
position: 3249776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3249892:-1
position: 3249892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3233829-3233887:-1:exon

position:3233829:-1
position: 3233829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3233887:-1
position: 3233887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3232674-3232918:-1:exon

position:3232918:-1
position: 3232918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC122542749
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542749
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calpain-3-like
translation: MDQVIPPDQGFGEGYTGCFRFKFWQYGQWVEVVVDDQLPTINNKLAFLYSKDNNEFWSPLLEKAYAKMKGSYESLYIGYPLEAMVDLTGGAPESFQMSEMPKDLWKFLRKLLERGSIICCAKPGPVGVLNEQGIVTGHAYSVTGVDQVQVKTNRIELVRVRNPWGRVEWNGAWSDGSAEWSQVTDTNCRQMVHLEDGEFWMSIEDFKKNFGNVEICHLSLSQLSNPDGKLKPWVQMVYEGRWIRGFSAGGNLYYKDKYYWMNPQFKLTLFEEDDDPDDPEVTCTFLVALMQKHRRRMRLTGVNFLYIGIDIFKGNPTKAFLTHEDLQEDPPVLSVKEHKNSAEVTMRGCLPPGHYVIIPSTANPNEEGEFLLRVFTEKGNTAEPAERNTLPMENPQCLPNLAPCPLPSAGESKELFDRMCGPDEAISALELQKLLIEILQKSGLNEKWDGFGLDACKSLISLTDRHGFGKMGFTEFSNLWSKICQWTRVFNQFDKDGSGTMNSQEMFSALQAAGFQVDEFLMQLIGLRYTDPDLTFSYVTFICCLTKLDTMIRSFKTMDKFGTGVINITYKEWLQMTMYS
SIO_010081: LOC122542749
subclass of: SO_0000673
so part of: LOC122542749
location: complement(join(3232892..3232918,3233829..3233887,3249776..3249892,3250637..3250715,3251783..3251851,3253390..3253454,3254117..3254177,3254519..3254596,3255310..3255349,3260553..3260761,3261205..3261377,3262585..3262751,3263396..3263467,3265191..3265276,3270046..3270117,3271529..3271697,3272558..3272691,3272926..3272991))
location: region:3232892-3272991:-1
so has part: feature:3272926-3272991:-1:exon
so has part: feature:3272558-3272691:-1:exon
so has part: feature:3271529-3271697:-1:exon
so has part: feature:3270046-3270117:-1:exon
so has part: feature:3265191-3265276:-1:exon
so has part: feature:3263396-3263467:-1:exon
so has part: feature:3262585-3262751:-1:exon
so has part: feature:3261205-3261377:-1:exon
so has part: feature:3260553-3260761:-1:exon
so has part: feature:3255310-3255349:-1:exon
so has part: feature:3254519-3254596:-1:exon
so has part: feature:3254117-3254177:-1:exon
so has part: feature:3253390-3253454:-1:exon
so has part: feature:3251783-3251851:-1:exon
so has part: feature:3250637-3250715:-1:exon
so has part: feature:3249776-3249892:-1:exon
so has part: feature:3233829-3233887:-1:exon
so has part: feature:3232892-3232918:-1:exon

XP_043536684.1
type: Protein
SIO_000068: ncbiprotein

position:3232892:-1
position: 3232892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3272991:-1
position: 3272991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3272926-3272991:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3272558-3272691:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3271529-3271697:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3270046-3270117:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3265191-3265276:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3263396-3263467:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3262585-3262751:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3261205-3261377:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3260553-3260761:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3255310-3255349:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3254519-3254596:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3254117-3254177:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3253390-3253454:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3251783-3251851:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3250637-3250715:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3249776-3249892:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3233829-3233887:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3232892-3232918:-1:exon

eif3k
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: eif3k
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3288862..3306407)
location: region:3288862-3306407:-1
so has part: feature:3288862-3306407:-1:exon
subclass of: SO_0000010

122542750
type: Gene
SIO_000068: ncbigene

position:3288862:-1
position: 3288862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3306407:-1
position: 3306407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3288862-3306407:-1:exon

eif3k
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: eif3k
product: eukaryotic translation initiation factor 3, subunit K
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680751.1
SIO_010081: eif3k
subclass of: SO_0000673
so part of: eif3k
location: complement(join(3288862..3288973,3289571..3289696,3294457..3294534,3294846..3294912,3298176..3298250,3299804..3299924,3300665..3300763,3306129..3306407))
location: region:3288862-3306407:-1
so has part: feature:3306129-3306407:-1:exon
so has part: feature:3300665-3300763:-1:exon
so has part: feature:3299804-3299924:-1:exon
so has part: feature:3298176-3298250:-1:exon
so has part: feature:3294846-3294912:-1:exon
so has part: feature:3294457-3294534:-1:exon
so has part: feature:3289571-3289696:-1:exon
so has part: feature:3288862-3288973:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3306129-3306407:-1:exon

position:3306129:-1
position: 3306129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3300665-3300763:-1:exon

position:3300665:-1
position: 3300665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3300763:-1
position: 3300763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3299804-3299924:-1:exon

position:3299804:-1
position: 3299804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3299924:-1
position: 3299924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3298176-3298250:-1:exon

position:3298176:-1
position: 3298176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3298250:-1
position: 3298250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3294846-3294912:-1:exon

position:3294846:-1
position: 3294846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3294912:-1
position: 3294912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3294457-3294534:-1:exon

position:3294457:-1
position: 3294457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3294534:-1
position: 3294534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3289571-3289696:-1:exon

position:3289571:-1
position: 3289571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3289696:-1
position: 3289696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3288862-3288973:-1:exon

position:3288973:-1
position: 3288973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

eif3k
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: eif3k
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 3 subunit K
translation: MSAIEQMRANVGKLLKGIDRYNPENLSTLERYVETQARENAYDLEANLAVLKLYQFNPAFFQTTVTAQILLKALTNLPHTDFTLCKCMIDQTHQEERPIQQILNLGDLLETCHFQDFWRNLEENSELIDGITSFEDSVRKFICHVVGITYQTIEKWLLAEMLGDLTDMQLQVWMSKYGWVEAEPDKIFICNQEESIKPKNIVEKIDFDSVASIMASS
SIO_010081: eif3k
subclass of: SO_0000673
so part of: eif3k
location: complement(join(3288945..3288973,3289571..3289696,3294457..3294534,3294846..3294912,3298176..3298250,3299804..3299924,3300665..3300763,3306129..3306187))
location: region:3288945-3306187:-1
so has part: feature:3306129-3306187:-1:exon
so has part: feature:3300665-3300763:-1:exon
so has part: feature:3299804-3299924:-1:exon
so has part: feature:3298176-3298250:-1:exon
so has part: feature:3294846-3294912:-1:exon
so has part: feature:3294457-3294534:-1:exon
so has part: feature:3289571-3289696:-1:exon
so has part: feature:3288945-3288973:-1:exon

XP_043536686.1
type: Protein
SIO_000068: ncbiprotein

position:3288945:-1
position: 3288945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3306187:-1
position: 3306187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3306129-3306187:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3300665-3300763:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3299804-3299924:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3298176-3298250:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3294846-3294912:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3294457-3294534:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3289571-3289696:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3288945-3288973:-1:exon

LOC122542958
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: LOC122542958
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 3309500..3309628
location: region:3309500-3309628:1
so has part: feature:3309500-3309628:1:exon
subclass of: SO_0000623

122542958
type: Gene
SIO_000068: ncbigene

position:3309500:1
position: 3309500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3309628:1
position: 3309628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3309500-3309628:1:exon

LOC122542958
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 36176
nc RNA class: snRNA
gene: LOC122542958
product: U6atac minor spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00619
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006309895.1
SIO_010081: LOC122542958
subclass of: SO_0000673
so part of: LOC122542958
location: 3309500..3309628
location: region:3309500-3309628:1
so has part: feature:3309500-3309628:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3309500-3309628:1:exon

clip3
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: clip3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3314768..3365078
location: region:3314768-3365078:1
so has part: feature:3314768-3365078:1:exon
subclass of: SO_0000010

122542751
type: Gene
SIO_000068: ncbigene

position:3314768:1
position: 3314768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3365078:1
position: 3365078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3314768-3365078:1:exon

clip3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: clip3
product: CAP-GLY domain containing linker protein 3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680752.1
SIO_010081: clip3
subclass of: SO_0000673
so part of: clip3
location: join(3314768..3314978,3329327..3329492,3330600..3330739,3342649..3342742,3343885..3344046,3345264..3345382,3346499..3346735,3348388..3348523,3350065..3350193,3354165..3354299,3356553..3356676,3357145..3357209,3357841..3357913,3364774..3365078)
location: region:3314768-3365078:1
so has part: feature:3314768-3314978:1:exon
so has part: feature:3329327-3329492:1:exon
so has part: feature:3330600-3330739:1:exon
so has part: feature:3342649-3342742:1:exon
so has part: feature:3343885-3344046:1:exon
so has part: feature:3345264-3345382:1:exon
so has part: feature:3346499-3346735:1:exon
so has part: feature:3348388-3348523:1:exon
so has part: feature:3350065-3350193:1:exon
so has part: feature:3354165-3354299:1:exon
so has part: feature:3356553-3356676:1:exon
so has part: feature:3357145-3357209:1:exon
so has part: feature:3357841-3357913:1:exon
so has part: feature:3364774-3365078:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3314768-3314978:1:exon

position:3314978:1
position: 3314978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3329327-3329492:1:exon

position:3329327:1
position: 3329327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3329492:1
position: 3329492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3330600-3330739:1:exon

position:3330600:1
position: 3330600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3330739:1
position: 3330739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3342649-3342742:1:exon

position:3342649:1
position: 3342649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3342742:1
position: 3342742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3343885-3344046:1:exon

position:3343885:1
position: 3343885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3344046:1
position: 3344046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3345264-3345382:1:exon

position:3345264:1
position: 3345264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3345382:1
position: 3345382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3346499-3346735:1:exon

position:3346499:1
position: 3346499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3346735:1
position: 3346735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3348388-3348523:1:exon

position:3348388:1
position: 3348388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3348523:1
position: 3348523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3350065-3350193:1:exon

position:3350065:1
position: 3350065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3350193:1
position: 3350193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3354165-3354299:1:exon

position:3354165:1
position: 3354165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3354299:1
position: 3354299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3356553-3356676:1:exon

position:3356553:1
position: 3356553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3356676:1
position: 3356676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3357145-3357209:1:exon

position:3357145:1
position: 3357145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3357209:1
position: 3357209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3357841-3357913:1:exon

position:3357841:1
position: 3357841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3357913:1
position: 3357913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3364774-3365078:1:exon

position:3364774:1
position: 3364774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

clip3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: clip3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CAP-Gly domain-containing linker protein 3
translation: MTKENVTDVASEEEHKELHEQQPAEFQSPVLERRKKPVVHPSAPAPLPKDYAFTFFDPNDPACQEILFDPQTTIAELFAIIRQWVPQVQHRIDIIGSEILKRGCHVNDRDGLTDMTLLHYACKAGAHGVGDPVAAVRLCNQLISLGADVGLRSRWTNMNALHYAAYFDVPEIARILLKAHKSKVLNSTCSDFNHGTALHIAASNLCLGAVKCLLEHGANPAVRNRKGQVPADVVPDPMDMTLDKAEAAMVAKELKQLLLDAVPLSCNLPKVTLPNYDNIPGNLMLTSLGLKLGDRVIVDTDKAGTLRFCGTTEFASGQWVGVELDEPEGKNDGSVGGISYFICPPKHGYFSPVSKISKAPDQTPSSVTSTPKTPRMDFSRMTGKMKKDKKALRRKSLSVGSLDREGVKIEIGDQVLVAGQKPGIIRYYGKTDFAPGYWYGIELDKATGKHDGSVFGVRYYTCSPKYGVFAPPSRVQRIGGPKGPPSDGTIGKKIHQVTMTQPKRNLAAVRTPKDITSESSISRLLFCCWFPWMLRAEMQS
SIO_010081: clip3
subclass of: SO_0000673
so part of: clip3
location: join(3329339..3329492,3330600..3330739,3342649..3342742,3343885..3344046,3345264..3345382,3346499..3346735,3348388..3348523,3350065..3350193,3354165..3354299,3356553..3356676,3357145..3357209,3357841..3357913,3364774..3364828)
location: region:3329339-3364828:1
so has part: feature:3329339-3329492:1:exon
so has part: feature:3330600-3330739:1:exon
so has part: feature:3342649-3342742:1:exon
so has part: feature:3343885-3344046:1:exon
so has part: feature:3345264-3345382:1:exon
so has part: feature:3346499-3346735:1:exon
so has part: feature:3348388-3348523:1:exon
so has part: feature:3350065-3350193:1:exon
so has part: feature:3354165-3354299:1:exon
so has part: feature:3356553-3356676:1:exon
so has part: feature:3357145-3357209:1:exon
so has part: feature:3357841-3357913:1:exon
so has part: feature:3364774-3364828:1:exon

XP_043536687.1
type: Protein
SIO_000068: ncbiprotein

position:3329339:1
position: 3329339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3364828:1
position: 3364828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3329339-3329492:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3330600-3330739:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3342649-3342742:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3343885-3344046:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3345264-3345382:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3346499-3346735:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3348388-3348523:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3350065-3350193:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3354165-3354299:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3356553-3356676:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3357145-3357209:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3357841-3357913:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3364774-3364828:1:exon

LOC122542683
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: LOC122542683
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3404083..3470589
location: region:3404083-3470589:1
so has part: feature:3404083-3470589:1:exon
subclass of: SO_0000010

122542683
type: Gene
SIO_000068: ncbigene

position:3404083:1
position: 3404083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3470589:1
position: 3470589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3404083-3470589:1:exon

LOC122542683
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542683
product: uncharacterized LOC122542683
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 338 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_043680660.1
SIO_010081: LOC122542683
subclass of: SO_0000673
so part of: LOC122542683
location: join(3404083..3404601,3408606..3408768,3411224..3411373,3414532..3414692,3417281..3417457,3417684..3417825,3421368..3421555,3430169..3430310,3431261..3431441,3440978..3441254,3445122..3445284,3451811..3451960,3455620..3455780,3459026..3459202,3459506..3459647,3467510..3467697,3468042..3468183,3470196..3470589)
location: region:3404083-3470589:1
so has part: feature:3404083-3404601:1:exon
so has part: feature:3408606-3408768:1:exon
so has part: feature:3411224-3411373:1:exon
so has part: feature:3414532-3414692:1:exon
so has part: feature:3417281-3417457:1:exon
so has part: feature:3417684-3417825:1:exon
so has part: feature:3421368-3421555:1:exon
so has part: feature:3430169-3430310:1:exon
so has part: feature:3431261-3431441:1:exon
so has part: feature:3440978-3441254:1:exon
so has part: feature:3445122-3445284:1:exon
so has part: feature:3451811-3451960:1:exon
so has part: feature:3455620-3455780:1:exon
so has part: feature:3459026-3459202:1:exon
so has part: feature:3459506-3459647:1:exon
so has part: feature:3467510-3467697:1:exon
so has part: feature:3468042-3468183:1:exon
so has part: feature:3470196-3470589:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3404083-3404601:1:exon

position:3404601:1
position: 3404601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3408606-3408768:1:exon

position:3408606:1
position: 3408606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3408768:1
position: 3408768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3411224-3411373:1:exon

position:3411224:1
position: 3411224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3411373:1
position: 3411373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3414532-3414692:1:exon

position:3414532:1
position: 3414532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3414692:1
position: 3414692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3417281-3417457:1:exon

position:3417281:1
position: 3417281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3417457:1
position: 3417457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3417684-3417825:1:exon

position:3417684:1
position: 3417684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3417825:1
position: 3417825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3421368-3421555:1:exon

position:3421368:1
position: 3421368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3421555:1
position: 3421555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3430169-3430310:1:exon

position:3430169:1
position: 3430169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3430310:1
position: 3430310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3431261-3431441:1:exon

position:3431261:1
position: 3431261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3431441:1
position: 3431441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3440978-3441254:1:exon

position:3440978:1
position: 3440978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3441254:1
position: 3441254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3445122-3445284:1:exon

position:3445122:1
position: 3445122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3445284:1
position: 3445284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3451811-3451960:1:exon

position:3451811:1
position: 3451811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3451960:1
position: 3451960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3455620-3455780:1:exon

position:3455620:1
position: 3455620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3455780:1
position: 3455780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3459026-3459202:1:exon

position:3459026:1
position: 3459026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3459202:1
position: 3459202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3459506-3459647:1:exon

position:3459506:1
position: 3459506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3459647:1
position: 3459647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3467510-3467697:1:exon

position:3467510:1
position: 3467510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3467697:1
position: 3467697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3468042-3468183:1:exon

position:3468042:1
position: 3468042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3468183:1
position: 3468183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3470196-3470589:1:exon

position:3470196:1
position: 3470196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC122542683
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542683
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC122542683
translation: MDLSDPGKTLLFAFLIILFVVWLLKRQQVQKGRFPPGPPALPLLGNLFHVNVKAPHKSLIKLSEQYGPVYTVWFGTYPAVVLCGFDTIKEALIERGNDFGSRYPLPTLHKASEGYGVIASSGERWKQLRRFSLSTLRNFGMGKKSIEERIQEEAQFLVKAFRNKKESPFNPDFLMRCAASNIICSIVFGDRFEYGDKEFLSLLEMIADNGRILSGPWVQLYNNFPKIMEFLPGPHKRIFQNVSSLSAFLNKSIQSHKESLQKHFSRDYIDSFLIKMDEEKHNLDSEFNDKNLLMTTMNLFLAGTETTSTTLRWAIQILAKYPQIQEKIHQEIDEVIGSSRCPSIEDRTKMPYTDAVIHEVQRYVDLIPMNLPHMASNDIEFRGYLIPKGTFVIPVLSSVLKSTSLWEKPDSFDPNHFLDKNGCFKNSESFMPFSAGKRKCLGESLARMELFLFLTTLLQNFVFNPVIDHKDINISSVSSGILHIPHVYKFCAISRYLLWQIVRQISQPEHSFYLLLQELIFISYAITMDSSNPATTLLLALLSVLLLLWFLKSKRPQYGRLPPAPPALPIVGNLFQMDIKAPHKSLIKLSKQYGPVFTLWFGGTPVVVLCGFETLKEGLIERGYDFSGRYLLPILKKVSDGYGIAFSNGERWKQLRRFSLSTLKNFGMGKRSIEERIQEEAQCLVTAIRNKQELPFNPDFLLRCAVSNIICSIVFGDRFEYEDERFLTLMERTEGISNAFSKPGVQMYNNFPKIMDFLPGSHHKILQNMADLKTFVNQMIQSHRGSLQKDFPRDYIDSFLIKMDEEKHKPDSEFIDENLLMSVINLFLAGTESTSTTLQWAIQILVKFPHIQEKIYQEICEMIGSYRRPAIEDRAKMPYTDAVIHEVQRYIDLVPMNIPHMATKDVEFRGYLIPKGTFVITVLSSALKATSQWETPDSFNPNHFLDENGCFKQSESFMAFSAGKRMCLGASLARMELFLFLTTLLQNFVFNSITDHEDIDISPATSGILVKPHVYKFCAISR
SIO_010081: LOC122542683
subclass of: SO_0000673
so part of: LOC122542683
location: join(3404419..3404601,3408606..3408768,3411224..3411373,3414532..3414692,3417281..3417457,3417684..3417825,3421368..3421555,3430169..3430310,3431261..3431441,3440978..3441254,3445122..3445284,3451811..3451960,3455620..3455780,3459026..3459202,3459506..3459647,3467510..3467697,3468042..3468183,3470196..3470377)
location: region:3404419-3470377:1
so has part: feature:3404419-3404601:1:exon
so has part: feature:3408606-3408768:1:exon
so has part: feature:3411224-3411373:1:exon
so has part: feature:3414532-3414692:1:exon
so has part: feature:3417281-3417457:1:exon
so has part: feature:3417684-3417825:1:exon
so has part: feature:3421368-3421555:1:exon
so has part: feature:3430169-3430310:1:exon
so has part: feature:3431261-3431441:1:exon
so has part: feature:3440978-3441254:1:exon
so has part: feature:3445122-3445284:1:exon
so has part: feature:3451811-3451960:1:exon
so has part: feature:3455620-3455780:1:exon
so has part: feature:3459026-3459202:1:exon
so has part: feature:3459506-3459647:1:exon
so has part: feature:3467510-3467697:1:exon
so has part: feature:3468042-3468183:1:exon
so has part: feature:3470196-3470377:1:exon

XP_043536595.1
type: Protein
SIO_000068: ncbiprotein

position:3404419:1
position: 3404419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3470377:1
position: 3470377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3404419-3404601:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3408606-3408768:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3411224-3411373:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3414532-3414692:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3417281-3417457:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3417684-3417825:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3421368-3421555:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3430169-3430310:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3431261-3431441:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3440978-3441254:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3445122-3445284:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3451811-3451960:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3455620-3455780:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3459026-3459202:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3459506-3459647:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3467510-3467697:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3468042-3468183:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3470196-3470377:1:exon

alkbh6
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: alkbh6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3472861..3494310)
location: region:3472861-3494310:-1
so has part: feature:3472861-3494310:-1:exon
subclass of: SO_0000010

122542752
type: Gene
SIO_000068: ncbigene

position:3472861:-1
position: 3472861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3494310:-1
position: 3494310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3472861-3494310:-1:exon

alkbh6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: alkbh6
product: alkB homolog 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_043680753.1
SIO_010081: alkbh6
subclass of: SO_0000673
so part of: alkbh6
location: complement(join(3472861..3473906,3477679..3477789,3478502..3478653,3482506..3482566,3485136..3485204,3488486..3488608,3494131..3494310))
location: region:3472861-3494310:-1
so has part: feature:3494131-3494310:-1:exon
so has part: feature:3488486-3488608:-1:exon
so has part: feature:3485136-3485204:-1:exon
so has part: feature:3482506-3482566:-1:exon
so has part: feature:3478502-3478653:-1:exon
so has part: feature:3477679-3477789:-1:exon
so has part: feature:3472861-3473906:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3494131-3494310:-1:exon

position:3494131:-1
position: 3494131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3488486-3488608:-1:exon

position:3488486:-1
position: 3488486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3488608:-1
position: 3488608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3485136-3485204:-1:exon

position:3485136:-1
position: 3485136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3485204:-1
position: 3485204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3482506-3482566:-1:exon

position:3482506:-1
position: 3482506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3482566:-1
position: 3482566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3478502-3478653:-1:exon

position:3478502:-1
position: 3478502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3478653:-1
position: 3478653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3477679-3477789:-1:exon

position:3477679:-1
position: 3477679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3477789:-1
position: 3477789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3472861-3473906:-1:exon

position:3473906:-1
position: 3473906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

alkbh6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: alkbh6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-ketoglutarate-dependent dioxygenase alkB homolog 6
translation: MDAQNQRPCELEPYYVDQAPATVYYIPNFITASEEDYLLQQVYNSPKPKWTQLSGRRLQNWGGLPHSRGMLAEKLPDWLAKYAQKISALGPFAGQVANHVLVNEYNPGEGIMPHEDGPLYFPTVTTISLGSQTLLDFYHPIEREDEEVKVYSPQTEETRYLLSLLLEPRSLLMLQDDMYVKYLHGIRPVREDIVTEKVANLKSCNAKLGAVLKRTTRISLTIRYVPKVLKTKILLGRK
SIO_010081: alkbh6
subclass of: SO_0000673
so part of: alkbh6
location: complement(join(3473637..3473906,3477679..3477789,3478502..3478653,3482506..3482566,3485136..3485204,3488486..3488539))
location: region:3473637-3488539:-1
so has part: feature:3488486-3488539:-1:exon
so has part: feature:3485136-3485204:-1:exon
so has part: feature:3482506-3482566:-1:exon
so has part: feature:3478502-3478653:-1:exon
so has part: feature:3477679-3477789:-1:exon
so has part: feature:3473637-3473906:-1:exon

XP_043536688.1
type: Protein
SIO_000068: ncbiprotein

position:3473637:-1
position: 3473637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3488539:-1
position: 3488539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3488486-3488539:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3485136-3485204:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3482506-3482566:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3478502-3478653:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3477679-3477789:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3473637-3473906:-1:exon

LOC122542753
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: LOC122542753
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3650868..3749475)
location: region:3650868-3749475:-1
so has part: feature:3650868-3749475:-1:exon
subclass of: SO_0000010

122542753
type: Gene
SIO_000068: ncbigene

position:3650868:-1
position: 3650868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3749475:-1
position: 3749475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3650868-3749475:-1:exon

LOC122542753
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542753
product: SPARC-related modular calcium-binding protein 1-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680755.1
SIO_010081: LOC122542753
subclass of: SO_0000673
so part of: LOC122542753
location: complement(join(3650868..3651814,3653776..3653872,3657565..3657647,3658698..3658890,3660351..3660419,3662995..3663072,3669147..3669197,3674347..3674397,3677244..3677343,3692178..3692290,3697050..3697221,3748478..3749475))
location: region:3650868-3749475:-1
so has part: feature:3748478-3749475:-1:exon
so has part: feature:3697050-3697221:-1:exon
so has part: feature:3692178-3692290:-1:exon
so has part: feature:3677244-3677343:-1:exon
so has part: feature:3674347-3674397:-1:exon
so has part: feature:3669147-3669197:-1:exon
so has part: feature:3662995-3663072:-1:exon
so has part: feature:3660351-3660419:-1:exon
so has part: feature:3658698-3658890:-1:exon
so has part: feature:3657565-3657647:-1:exon
so has part: feature:3653776-3653872:-1:exon
so has part: feature:3650868-3651814:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3748478-3749475:-1:exon

position:3748478:-1
position: 3748478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3697050-3697221:-1:exon

position:3697050:-1
position: 3697050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3697221:-1
position: 3697221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3692178-3692290:-1:exon

position:3692178:-1
position: 3692178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3692290:-1
position: 3692290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3677244-3677343:-1:exon

position:3677244:-1
position: 3677244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3677343:-1
position: 3677343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3674347-3674397:-1:exon

position:3674347:-1
position: 3674347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3674397:-1
position: 3674397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3669147-3669197:-1:exon

position:3669147:-1
position: 3669147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3669197:-1
position: 3669197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3662995-3663072:-1:exon

position:3662995:-1
position: 3662995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3663072:-1
position: 3663072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3660351-3660419:-1:exon

position:3660351:-1
position: 3660351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3660419:-1
position: 3660419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3658698-3658890:-1:exon

position:3658698:-1
position: 3658698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3658890:-1
position: 3658890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3657565-3657647:-1:exon

position:3657565:-1
position: 3657565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3657647:-1
position: 3657647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3653776-3653872:-1:exon

position:3653776:-1
position: 3653776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3653872:-1
position: 3653872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3650868-3651814:-1:exon

position:3651814:-1
position: 3651814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC122542753
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542753
product: SPARC-related modular calcium-binding protein 1-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680754.1
SIO_010081: LOC122542753
subclass of: SO_0000673
so part of: LOC122542753
location: complement(join(3650868..3651814,3653776..3653872,3657565..3657647,3658698..3658890,3660351..3660419,3662995..3663072,3669141..3669197,3674347..3674397,3677244..3677343,3692178..3692290,3697050..3697221,3748478..3749473))
location: region:3650868-3749473:-1
so has part: feature:3748478-3749473:-1:exon
so has part: feature:3697050-3697221:-1:exon
so has part: feature:3692178-3692290:-1:exon
so has part: feature:3677244-3677343:-1:exon
so has part: feature:3674347-3674397:-1:exon
so has part: feature:3669141-3669197:-1:exon
so has part: feature:3662995-3663072:-1:exon
so has part: feature:3660351-3660419:-1:exon
so has part: feature:3658698-3658890:-1:exon
so has part: feature:3657565-3657647:-1:exon
so has part: feature:3653776-3653872:-1:exon
so has part: feature:3650868-3651814:-1:exon

position:3749473:-1
position: 3749473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3748478-3749473:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3697050-3697221:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3692178-3692290:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3677244-3677343:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3674347-3674397:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3669141-3669197:-1:exon

position:3669141:-1
position: 3669141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3662995-3663072:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3660351-3660419:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3658698-3658890:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3657565-3657647:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3653776-3653872:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3650868-3651814:-1:exon

LOC122542753
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542753
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SPARC-related modular calcium-binding protein 1-like isoform X2
translation: MSPFPLILLTIELFGFSATSKPHRFDRTLFLIAESDRGGLCNIDCSRAQQKPVCGSDRKFYKSHCAFQRAKCRDPTLETKPRSRCSERATARCREDRAQALAQTRRATDSIIVPECNEDGSFAQVQCHKLTGYCWCVTPDGKPISGSSVHNRTPTCSDSTKDKTSQRGRDSSRMQQGIKLRPTTRTLIRNTGEALDHHKQRPVEDRHKDALLISKNPELTYPALWFLFTRDAKSNRSAKLDQPVSCDQERRSAIEEAKQHQYEGAFVPQCSSNGLYKQVQCHQATGYCWCVRVDSGHPIQGTTARNQTPDCGSAGRSKISEMAPLFRDRKLQGCPGGKKTEFVAGLLKSLIMDMDQFGYHPTWRRVSEGSTSFLLEDRAIRWYFGRLDKDFNNEISEKELRPFKVYLRKNAKPKKCTRKFIEYCDLNSSKSISLHELKGCLGFIKSRSRPLF
SIO_010081: LOC122542753
subclass of: SO_0000673
so part of: LOC122542753
location: complement(join(3651550..3651814,3653776..3653872,3657565..3657647,3658698..3658890,3660351..3660419,3662995..3663072,3669147..3669197,3674347..3674397,3677244..3677343,3692178..3692290,3697050..3697221,3748478..3748564))
location: region:3651550-3748564:-1
so has part: feature:3748478-3748564:-1:exon
so has part: feature:3697050-3697221:-1:exon
so has part: feature:3692178-3692290:-1:exon
so has part: feature:3677244-3677343:-1:exon
so has part: feature:3674347-3674397:-1:exon
so has part: feature:3669147-3669197:-1:exon
so has part: feature:3662995-3663072:-1:exon
so has part: feature:3660351-3660419:-1:exon
so has part: feature:3658698-3658890:-1:exon
so has part: feature:3657565-3657647:-1:exon
so has part: feature:3653776-3653872:-1:exon
so has part: feature:3651550-3651814:-1:exon

XP_043536690.1
type: Protein
SIO_000068: ncbiprotein

position:3651550:-1
position: 3651550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3748564:-1
position: 3748564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3748478-3748564:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3697050-3697221:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3692178-3692290:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3677244-3677343:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3674347-3674397:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3669147-3669197:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3662995-3663072:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3660351-3660419:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3658698-3658890:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3657565-3657647:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3653776-3653872:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3651550-3651814:-1:exon

LOC122542753
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542753
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SPARC-related modular calcium-binding protein 1-like isoform X1
translation: MSPFPLILLTIELFGFSATSKPHRFDRTLFLIAESDRGGLCNIDCSRAQQKPVCGSDRKFYKSHCAFQRAKCRDPTLETKPRSRCSERATARCREDRAQALAQTRRATDSIIVPECNEDGSFAQVQCHKLTGYCWCVTPDGKPISGSSVHNRTPTCSDSTKDKTSQRGRDSSRMQQGIKLRPTTRTLIRNTGKGEALDHHKQRPVEDRHKDALLISKNPELTYPALWFLFTRDAKSNRSAKLDQPVSCDQERRSAIEEAKQHQYEGAFVPQCSSNGLYKQVQCHQATGYCWCVRVDSGHPIQGTTARNQTPDCGSAGRSKISEMAPLFRDRKLQGCPGGKKTEFVAGLLKSLIMDMDQFGYHPTWRRVSEGSTSFLLEDRAIRWYFGRLDKDFNNEISEKELRPFKVYLRKNAKPKKCTRKFIEYCDLNSSKSISLHELKGCLGFIKSRSRPLF
SIO_010081: LOC122542753
subclass of: SO_0000673
so part of: LOC122542753
location: complement(join(3651550..3651814,3653776..3653872,3657565..3657647,3658698..3658890,3660351..3660419,3662995..3663072,3669141..3669197,3674347..3674397,3677244..3677343,3692178..3692290,3697050..3697221,3748478..3748564))
location: region:3651550-3748564:-1
so has part: feature:3748478-3748564:-1:exon
so has part: feature:3697050-3697221:-1:exon
so has part: feature:3692178-3692290:-1:exon
so has part: feature:3677244-3677343:-1:exon
so has part: feature:3674347-3674397:-1:exon
so has part: feature:3669141-3669197:-1:exon
so has part: feature:3662995-3663072:-1:exon
so has part: feature:3660351-3660419:-1:exon
so has part: feature:3658698-3658890:-1:exon
so has part: feature:3657565-3657647:-1:exon
so has part: feature:3653776-3653872:-1:exon
so has part: feature:3651550-3651814:-1:exon

XP_043536689.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3748478-3748564:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3697050-3697221:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3692178-3692290:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3677244-3677343:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3674347-3674397:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3669141-3669197:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3662995-3663072:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3660351-3660419:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3658698-3658890:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3657565-3657647:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3653776-3653872:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3651550-3651814:-1:exon

LOC122542754
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: LOC122542754
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3747709..3769661
location: region:3747709-3769661:1
so has part: feature:3747709-3769661:1:exon
subclass of: SO_0000011

122542754
type: Gene
SIO_000068: ncbigene

position:3747709:1
position: 3747709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3769661:1
position: 3769661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3747709-3769661:1:exon

LOC122542754
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 36176
nc RNA class: lncRNA
gene: LOC122542754
product: uncharacterized LOC122542754
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_006309861.1
SIO_010081: LOC122542754
subclass of: SO_0000673
so part of: LOC122542754
location: join(3747709..3747842,3751436..3751544,3769485..3769661)
location: region:3747709-3769661:1
so has part: feature:3747709-3747842:1:exon
so has part: feature:3751436-3751544:1:exon
so has part: feature:3769485-3769661:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3747709-3747842:1:exon

position:3747842:1
position: 3747842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3751436-3751544:1:exon

position:3751436:1
position: 3751436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3751544:1
position: 3751544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3769485-3769661:1:exon

position:3769485:1
position: 3769485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC122542755
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: LOC122542755
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3778183..3799967
location: region:3778183-3799967:1
so has part: feature:3778183-3799967:1:exon
subclass of: SO_0000010

122542755
type: Gene
SIO_000068: ncbigene

position:3778183:1
position: 3778183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3799967:1
position: 3799967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3778183-3799967:1:exon

LOC122542755
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542755
product: dynein axonemal assembly factor 10-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_043680756.1
SIO_010081: LOC122542755
subclass of: SO_0000673
so part of: LOC122542755
location: join(3778183..3778810,3785121..3785221,3788575..3788705,3794534..3794635,3794735..3794850,3796367..3796501,3798547..3798644,3799238..3799967)
location: region:3778183-3799967:1
so has part: feature:3778183-3778810:1:exon
so has part: feature:3785121-3785221:1:exon
so has part: feature:3788575-3788705:1:exon
so has part: feature:3794534-3794635:1:exon
so has part: feature:3794735-3794850:1:exon
so has part: feature:3796367-3796501:1:exon
so has part: feature:3798547-3798644:1:exon
so has part: feature:3799238-3799967:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3778183-3778810:1:exon

position:3778810:1
position: 3778810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3785121-3785221:1:exon

position:3785121:1
position: 3785121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3785221:1
position: 3785221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3788575-3788705:1:exon

position:3788575:1
position: 3788575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3788705:1
position: 3788705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3794534-3794635:1:exon

position:3794534:1
position: 3794534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3794635:1
position: 3794635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3794735-3794850:1:exon

position:3794735:1
position: 3794735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3794850:1
position: 3794850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3796367-3796501:1:exon

position:3796367:1
position: 3796367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3796501:1
position: 3796501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3798547-3798644:1:exon

position:3798547:1
position: 3798547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3798644:1
position: 3798644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3799238-3799967:1:exon

position:3799238:1
position: 3799238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC122542755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542755
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynein axonemal assembly factor 10-like isoform X1
translation: MSDSPKPRLVSLSHQKLPLTPFGCLWIPCSNRFVCLGTDSGSGAPSRGIIGVYETTSGEIKDIHTIEKPRAFRCGTFGATSLQQRHLATGDFEGNLHIWNLEASETPLYSAKAHQEIINCIDGVGGLENGHGAPEIVTGSRDGTVKVWDSRQKDLPVANMEPAVGFNRRDCWTVAFGHSCTQWDRCVCAGYDNGDIKLFDLRNMEVRWETNVKSGVCCVEFDGKDISLNKLVATTLEGRVHVFNMQKYHRNSGFTCRSEKPYKFTAWVVRHLPQNRSIFITSGGAGCLHLWKHSESLTMLDRSDHEPDDKISTCTTTLLNNISLSSQPIGSLDWNTDKQGLCISASFDHNVHILMITEQQSF
SIO_010081: LOC122542755
subclass of: SO_0000673
so part of: LOC122542755
location: join(3778616..3778810,3785121..3785221,3788575..3788705,3794534..3794635,3794735..3794850,3796367..3796501,3798547..3798644,3799238..3799448)
location: region:3778616-3799448:1
so has part: feature:3778616-3778810:1:exon
so has part: feature:3785121-3785221:1:exon
so has part: feature:3788575-3788705:1:exon
so has part: feature:3794534-3794635:1:exon
so has part: feature:3794735-3794850:1:exon
so has part: feature:3796367-3796501:1:exon
so has part: feature:3798547-3798644:1:exon
so has part: feature:3799238-3799448:1:exon

XP_043536691.1
type: Protein
SIO_000068: ncbiprotein

position:3778616:1
position: 3778616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3799448:1
position: 3799448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3778616-3778810:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3785121-3785221:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3788575-3788705:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3794534-3794635:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3794735-3794850:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3796367-3796501:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3798547-3798644:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3799238-3799448:1:exon

LOC122542755
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542755
product: dynein axonemal assembly factor 10-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_043680757.1
SIO_010081: LOC122542755
subclass of: SO_0000673
so part of: LOC122542755
location: join(3778723..3778810,3779486..3779691,3785121..3785221,3788575..3788705,3794534..3794635,3794735..3794850,3796367..3796501,3798547..3798644,3799238..3799967)
location: region:3778723-3799967:1
so has part: feature:3778723-3778810:1:exon
so has part: feature:3779486-3779691:1:exon
so has part: feature:3785121-3785221:1:exon
so has part: feature:3788575-3788705:1:exon
so has part: feature:3794534-3794635:1:exon
so has part: feature:3794735-3794850:1:exon
so has part: feature:3796367-3796501:1:exon
so has part: feature:3798547-3798644:1:exon
so has part: feature:3799238-3799967:1:exon

position:3778723:1
position: 3778723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3778723-3778810:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3779486-3779691:1:exon

position:3779486:1
position: 3779486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3779691:1
position: 3779691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3785121-3785221:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3788575-3788705:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3794534-3794635:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3794735-3794850:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3796367-3796501:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3798547-3798644:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3799238-3799967:1:exon

LOC122542755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542755
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynein axonemal assembly factor 10-like isoform X2
translation: MLLHQCHSLLHKIEKPRAFRCGTFGATSLQQRHLATGDFEGNLHIWNLEASETPLYSAKAHQEIINCIDGVGGLENGHGAPEIVTGSRDGTVKVWDSRQKDLPVANMEPAVGFNRRDCWTVAFGHSCTQWDRCVCAGYDNGDIKLFDLRNMEVRWETNVKSGVCCVEFDGKDISLNKLVATTLEGRVHVFNMQKYHRNSGFTCRSEKPYKFTAWVVRHLPQNRSIFITSGGAGCLHLWKHSESLTMLDRSDHEPDDKISTCTTTLLNNISLSSQPIGSLDWNTDKQGLCISASFDHNVHILMITEQQSF
SIO_010081: LOC122542755
subclass of: SO_0000673
so part of: LOC122542755
location: join(3779656..3779691,3785121..3785221,3788575..3788705,3794534..3794635,3794735..3794850,3796367..3796501,3798547..3798644,3799238..3799448)
location: region:3779656-3799448:1
so has part: feature:3779656-3779691:1:exon
so has part: feature:3785121-3785221:1:exon
so has part: feature:3788575-3788705:1:exon
so has part: feature:3794534-3794635:1:exon
so has part: feature:3794735-3794850:1:exon
so has part: feature:3796367-3796501:1:exon
so has part: feature:3798547-3798644:1:exon
so has part: feature:3799238-3799448:1:exon

XP_043536692.1
type: Protein
SIO_000068: ncbiprotein

position:3779656:1
position: 3779656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3779656-3779691:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3785121-3785221:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3788575-3788705:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3794534-3794635:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3794735-3794850:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3796367-3796501:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3798547-3798644:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3799238-3799448:1:exon

LOC122542757
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: LOC122542757
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3804063..3821514)
location: region:3804063-3821514:-1
so has part: feature:3804063-3821514:-1:exon
subclass of: SO_0000010

122542757
type: Gene
SIO_000068: ncbigene

position:3804063:-1
position: 3804063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3821514:-1
position: 3821514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3804063-3821514:-1:exon

LOC122542757
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542757
product: serine/arginine-rich splicing factor 5-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680761.1
SIO_010081: LOC122542757
subclass of: SO_0000673
so part of: LOC122542757
location: complement(join(3804063..3805772,3806561..3806671,3807692..3807765,3810445..3810514,3813109..3813213,3815542..3815612,3819537..3819683,3821364..3821514))
location: region:3804063-3821514:-1
so has part: feature:3821364-3821514:-1:exon
so has part: feature:3819537-3819683:-1:exon
so has part: feature:3815542-3815612:-1:exon
so has part: feature:3813109-3813213:-1:exon
so has part: feature:3810445-3810514:-1:exon
so has part: feature:3807692-3807765:-1:exon
so has part: feature:3806561-3806671:-1:exon
so has part: feature:3804063-3805772:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3821364-3821514:-1:exon

position:3821364:-1
position: 3821364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3819537-3819683:-1:exon

position:3819537:-1
position: 3819537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3819683:-1
position: 3819683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3815542-3815612:-1:exon

position:3815542:-1
position: 3815542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3815612:-1
position: 3815612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3813109-3813213:-1:exon

position:3813109:-1
position: 3813109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3813213:-1
position: 3813213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3810445-3810514:-1:exon

position:3810445:-1
position: 3810445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3810514:-1
position: 3810514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3807692-3807765:-1:exon

position:3807692:-1
position: 3807692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3807765:-1
position: 3807765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3806561-3806671:-1:exon

position:3806561:-1
position: 3806561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3806671:-1
position: 3806671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3804063-3805772:-1:exon

position:3805772:-1
position: 3805772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC122542757
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542757
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine-rich splicing factor 5-like
translation: MNGCRVFIGRLSPQVRERDVEKFFKGYGRIREIDLKRGFGFVEFDDARDADDAVYELNGKELFRERITVELAKAPPRRGGGRFGGRFNYYRPRSERSSGLRYGPPVRTDYRLIVKNLSSRVSWQDLKDIMRQAGEVTFTDAHRVHNNEGIVEFASYSDLKNAIDKLDGKEISGRRVQLIEEPRRHRSWTRSRSRSSSRSRSYKGSRSASRSASRSPSRSRSRSRSRSPARDSKRQRNESRSLSRSPEVKRRRKPTQSRSRSNSPVKSTRSWSGSREQSPVNSAE
SIO_010081: LOC122542757
subclass of: SO_0000673
so part of: LOC122542757
location: complement(join(3805475..3805772,3806561..3806671,3807692..3807765,3810445..3810514,3813109..3813213,3815542..3815612,3819537..3819662))
location: region:3805475-3819662:-1
so has part: feature:3819537-3819662:-1:exon
so has part: feature:3815542-3815612:-1:exon
so has part: feature:3813109-3813213:-1:exon
so has part: feature:3810445-3810514:-1:exon
so has part: feature:3807692-3807765:-1:exon
so has part: feature:3806561-3806671:-1:exon
so has part: feature:3805475-3805772:-1:exon

XP_043536696.1
type: Protein
SIO_000068: ncbiprotein

position:3805475:-1
position: 3805475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3819662:-1
position: 3819662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3819537-3819662:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3815542-3815612:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3813109-3813213:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3810445-3810514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3807692-3807765:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3806561-3806671:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3805475-3805772:-1:exon

ccdc97
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: ccdc97
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3820527..3839916
location: region:3820527-3839916:1
so has part: feature:3820527-3839916:1:exon
subclass of: SO_0000010

122542756
type: Gene
SIO_000068: ncbigene

position:3820527:1
position: 3820527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3839916:1
position: 3839916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3820527-3839916:1:exon

ccdc97
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: ccdc97
product: coiled-coil domain containing 97, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_043680759.1
SIO_010081: ccdc97
subclass of: SO_0000673
so part of: ccdc97
location: join(3820527..3820545,3828181..3828741,3836556..3836801,3837840..3837969,3839456..3839916)
location: region:3820527-3839916:1
so has part: feature:3820527-3820545:1:exon
so has part: feature:3828181-3828741:1:exon
so has part: feature:3836556-3836801:1:exon
so has part: feature:3837840-3837969:1:exon
so has part: feature:3839456-3839916:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3820527-3820545:1:exon

position:3820545:1
position: 3820545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3828181-3828741:1:exon

position:3828181:1
position: 3828181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3828741:1
position: 3828741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3836556-3836801:1:exon

position:3836556:1
position: 3836556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3836801:1
position: 3836801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3837840-3837969:1:exon

position:3837840:1
position: 3837840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3837969:1
position: 3837969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3839456-3839916:1:exon

position:3839456:1
position: 3839456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ccdc97
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: ccdc97
product: coiled-coil domain containing 97, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_043680760.1
SIO_010081: ccdc97
subclass of: SO_0000673
so part of: ccdc97
location: join(3827445..3827619,3828181..3828741,3836556..3836801,3839456..3839916)
location: region:3827445-3839916:1
so has part: feature:3827445-3827619:1:exon
so has part: feature:3828181-3828741:1:exon
so has part: feature:3836556-3836801:1:exon
so has part: feature:3839456-3839916:1:exon

position:3827445:1
position: 3827445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3827445-3827619:1:exon

position:3827619:1
position: 3827619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3828181-3828741:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3836556-3836801:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3839456-3839916:1:exon

ccdc97
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: ccdc97
product: coiled-coil domain containing 97, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_043680758.1
SIO_010081: ccdc97
subclass of: SO_0000673
so part of: ccdc97
location: join(3827451..3827619,3828181..3828741,3836556..3836801,3837840..3837969,3839456..3839916)
location: region:3827451-3839916:1
so has part: feature:3827451-3827619:1:exon
so has part: feature:3828181-3828741:1:exon
so has part: feature:3836556-3836801:1:exon
so has part: feature:3837840-3837969:1:exon
so has part: feature:3839456-3839916:1:exon

position:3827451:1
position: 3827451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3827451-3827619:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3828181-3828741:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3836556-3836801:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3837840-3837969:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3839456-3839916:1:exon

ccdc97
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: ccdc97
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 97 isoform X1
translation: MDREDFSKRMEGSQTQDLLQDVPKVSDPSADIVTQEASAQVEGMSIISTEDHVSPSEVEEQIKSSVPTSPQEIDDAARLMNKFHDEQQEDAMNASLNSMFHTIASSKAQIKSQQKDEPDLMYDQKLDIIKDLFWCKPVVFLERFHKIIKEEHLVCFNHLAENYEVTFYSNEIRKSSMKKTARTNVRNKRYAALQQLIKDGEYFSDEQMRTRDPLLYQQYIRQYMTEEELLAENSKNLSNAMCLSDLLMSTYQEKIVQERLQWQQEREDACVEEEEDDEEEDDDTESKAADWIPSDDERSMLREEFVSRMYQRFLDGEDSDFDYSAVDDNPDFDNLDIINRDEEERYFDEEEPVEVEDIEMDKD
SIO_010081: ccdc97
subclass of: SO_0000673
so part of: ccdc97
location: join(3827586..3827619,3828181..3828741,3836556..3836801,3837840..3837969,3839456..3839576)
location: region:3827586-3839576:1
so has part: feature:3827586-3827619:1:exon
so has part: feature:3828181-3828741:1:exon
so has part: feature:3836556-3836801:1:exon
so has part: feature:3837840-3837969:1:exon
so has part: feature:3839456-3839576:1:exon

XP_043536693.1
type: Protein
SIO_000068: ncbiprotein

position:3827586:1
position: 3827586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3839576:1
position: 3839576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3827586-3827619:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3828181-3828741:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3836556-3836801:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3837840-3837969:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3839456-3839576:1:exon

ccdc97
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: ccdc97
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 97 isoform X3
translation: MDREDFSKRMEGSQTQDLLQDVPKVSDPSADIVTQEASAQVEGMSIISTEDHVSPSEVEEQIKSSVPTSPQEIDDAARLMNKFHDEQQEDAMNASLNSMFHTIASSKAQIKSQQKDEPDLMYDQKLDIIKDLFWCKPVVFLERFHKIIKEEHLVCFNHLAENYEVTFYSNEIRKSSMKKTARTNVRNKRYAALQQLIKDGEYFSDEQMRTRDPLLYQQYIRQYMTEEELLAENSKNLSNAMCLSDLLMSTYQEKIVQERLQWQQEREDACVEEEEDDEEEVLLMTTRILTTLTS
SIO_010081: ccdc97
subclass of: SO_0000673
so part of: ccdc97
location: join(3827586..3827619,3828181..3828741,3836556..3836801,3839456..3839499)
location: region:3827586-3839499:1
so has part: feature:3827586-3827619:1:exon
so has part: feature:3828181-3828741:1:exon
so has part: feature:3836556-3836801:1:exon
so has part: feature:3839456-3839499:1:exon

XP_043536695.1
type: Protein
SIO_000068: ncbiprotein

position:3839499:1
position: 3839499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3827586-3827619:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3828181-3828741:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3836556-3836801:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3839456-3839499:1:exon

ccdc97
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: ccdc97
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 97 isoform X2
translation: MSIISTEDHVSPSEVEEQIKSSVPTSPQEIDDAARLMNKFHDEQQEDAMNASLNSMFHTIASSKAQIKSQQKDEPDLMYDQKLDIIKDLFWCKPVVFLERFHKIIKEEHLVCFNHLAENYEVTFYSNEIRKSSMKKTARTNVRNKRYAALQQLIKDGEYFSDEQMRTRDPLLYQQYIRQYMTEEELLAENSKNLSNAMCLSDLLMSTYQEKIVQERLQWQQEREDACVEEEEDDEEEDDDTESKAADWIPSDDERSMLREEFVSRMYQRFLDGEDSDFDYSAVDDNPDFDNLDIINRDEEERYFDEEEPVEVEDIEMDKD
SIO_010081: ccdc97
subclass of: SO_0000673
so part of: ccdc97
location: join(3828276..3828741,3836556..3836801,3837840..3837969,3839456..3839576)
location: region:3828276-3839576:1
so has part: feature:3828276-3828741:1:exon
so has part: feature:3836556-3836801:1:exon
so has part: feature:3837840-3837969:1:exon
so has part: feature:3839456-3839576:1:exon

XP_043536694.1
type: Protein
SIO_000068: ncbiprotein

position:3828276:1
position: 3828276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3828276-3828741:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3836556-3836801:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3837840-3837969:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3839456-3839576:1:exon

c41h19orf47
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: c41h19orf47
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3849229..3892445
location: region:3849229-3892445:1
so has part: feature:3849229-3892445:1:exon
subclass of: SO_0000010

122542759
type: Gene
SIO_000068: ncbigene

position:3849229:1
position: 3849229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3892445:1
position: 3892445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3849229-3892445:1:exon

c41h19orf47
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: c41h19orf47
product: chromosome 41 C19orf47 homolog, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680766.1
SIO_010081: c41h19orf47
subclass of: SO_0000673
so part of: c41h19orf47
location: join(3849229..3849334,3865719..3865806,3869903..3870017,3877094..3877175,3881097..3881243,3881571..3881641,3889209..3892445)
location: region:3849229-3892445:1
so has part: feature:3849229-3849334:1:exon
so has part: feature:3865719-3865806:1:exon
so has part: feature:3869903-3870017:1:exon
so has part: feature:3877094-3877175:1:exon
so has part: feature:3881097-3881243:1:exon
so has part: feature:3881571-3881641:1:exon
so has part: feature:3889209-3892445:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3849229-3849334:1:exon

position:3849334:1
position: 3849334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3865719-3865806:1:exon

position:3865719:1
position: 3865719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3865806:1
position: 3865806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3869903-3870017:1:exon

position:3869903:1
position: 3869903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3870017:1
position: 3870017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3877094-3877175:1:exon

position:3877094:1
position: 3877094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3877175:1
position: 3877175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3881097-3881243:1:exon

position:3881097:1
position: 3881097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3881243:1
position: 3881243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3881571-3881641:1:exon

position:3881571:1
position: 3881571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3881641:1
position: 3881641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3889209-3892445:1:exon

position:3889209:1
position: 3889209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

c41h19orf47
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: c41h19orf47
product: chromosome 41 C19orf47 homolog, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680768.1
SIO_010081: c41h19orf47
subclass of: SO_0000673
so part of: c41h19orf47
location: join(3849229..3849334,3865719..3865806,3869903..3870017,3877094..3877175,3881097..3881168,3881571..3881641,3889209..3892445)
location: region:3849229-3892445:1
so has part: feature:3849229-3849334:1:exon
so has part: feature:3865719-3865806:1:exon
so has part: feature:3869903-3870017:1:exon
so has part: feature:3877094-3877175:1:exon
so has part: feature:3881097-3881168:1:exon
so has part: feature:3881571-3881641:1:exon
so has part: feature:3889209-3892445:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3849229-3849334:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3865719-3865806:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3869903-3870017:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3877094-3877175:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3881097-3881168:1:exon

position:3881168:1
position: 3881168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3881571-3881641:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3889209-3892445:1:exon

c41h19orf47
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: c41h19orf47
product: chromosome 41 C19orf47 homolog, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680763.1
SIO_010081: c41h19orf47
subclass of: SO_0000673
so part of: c41h19orf47
location: join(3849230..3849334,3865719..3865806,3869903..3870017,3877094..3877175,3879585..3879713,3881097..3881243,3881571..3881641,3889209..3892445)
location: region:3849230-3892445:1
so has part: feature:3849230-3849334:1:exon
so has part: feature:3865719-3865806:1:exon
so has part: feature:3869903-3870017:1:exon
so has part: feature:3877094-3877175:1:exon
so has part: feature:3879585-3879713:1:exon
so has part: feature:3881097-3881243:1:exon
so has part: feature:3881571-3881641:1:exon
so has part: feature:3889209-3892445:1:exon

position:3849230:1
position: 3849230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3849230-3849334:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3865719-3865806:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3869903-3870017:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3877094-3877175:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3879585-3879713:1:exon

position:3879585:1
position: 3879585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3879713:1
position: 3879713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3881097-3881243:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3881571-3881641:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3889209-3892445:1:exon

c41h19orf47
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: c41h19orf47
product: chromosome 41 C19orf47 homolog, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680764.1
SIO_010081: c41h19orf47
subclass of: SO_0000673
so part of: c41h19orf47
location: join(3849230..3849334,3865719..3865806,3869903..3870017,3877094..3877175,3879585..3879713,3881097..3881168,3881571..3881641,3889209..3892445)
location: region:3849230-3892445:1
so has part: feature:3849230-3849334:1:exon
so has part: feature:3865719-3865806:1:exon
so has part: feature:3869903-3870017:1:exon
so has part: feature:3877094-3877175:1:exon
so has part: feature:3879585-3879713:1:exon
so has part: feature:3881097-3881168:1:exon
so has part: feature:3881571-3881641:1:exon
so has part: feature:3889209-3892445:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3849230-3849334:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3865719-3865806:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3869903-3870017:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3877094-3877175:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3879585-3879713:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3881097-3881168:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3881571-3881641:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3889209-3892445:1:exon

c41h19orf47
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: c41h19orf47
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C19orf47 homolog isoform X1
translation: MVSVTLATSEWIQFFKDAGIPPGPAVNYAVSFVDNRIQKNMLMDLTKDIMNELGISVVGDIIAILKHAKVVYKQELAKLATESISTSHGNVQIDLKRTANSPASRMIANSLSRESPPSTPVRRPETSTSKISVTVANKLATKKAVLSRPADPGPETSAKRRRVTAEMEGKYIINMPKGTTAKTKKILEQQASKGLPRLSVFDRLGAEAKADTTTGNKPTGVFSRLGEVVNQKKESSDEDDAESVLQYAGVLKRAPAATAKESTKLTLTTTEKILAAKAKNTVTTIRRLSLPKASSRTVPSSEPTAAASTLRLQSAAKSKVSVRQRLGRPSATEADTQDNKVTSTKSRGSPEFTVTIKNTARTAVSTKVTSSTEGRLAQMDSTGTVSVFERLGKKLK
SIO_010081: c41h19orf47
subclass of: SO_0000673
so part of: c41h19orf47
location: join(3849316..3849334,3865719..3865806,3869903..3870017,3877094..3877175,3879585..3879713,3881097..3881243,3881571..3881641,3889209..3889748)
location: region:3849316-3889748:1
so has part: feature:3849316-3849334:1:exon
so has part: feature:3865719-3865806:1:exon
so has part: feature:3869903-3870017:1:exon
so has part: feature:3877094-3877175:1:exon
so has part: feature:3879585-3879713:1:exon
so has part: feature:3881097-3881243:1:exon
so has part: feature:3881571-3881641:1:exon
so has part: feature:3889209-3889748:1:exon

XP_043536698.1
type: Protein
SIO_000068: ncbiprotein

position:3849316:1
position: 3849316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3889748:1
position: 3889748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3849316-3849334:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3865719-3865806:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3869903-3870017:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3877094-3877175:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3879585-3879713:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3881097-3881243:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3881571-3881641:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3889209-3889748:1:exon

c41h19orf47
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: c41h19orf47
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C19orf47 homolog isoform X2
translation: MVSVTLATSEWIQFFKDAGIPPGPAVNYAVSFVDNRIQKNMLMDLTKDIMNELGISVVGDIIAILKHAKVVYKQELAKLATESISTSHGNVQIDLKRTANSPASRMIANSLSRESPPSTPVRRPETSTSKISVTVANKLATKKAVLSRPADPGPETSAKRRRVTAEMEGLPRLSVFDRLGAEAKADTTTGNKPTGVFSRLGEVVNQKKESSDEDDAESVLQYAGVLKRAPAATAKESTKLTLTTTEKILAAKAKNTVTTIRRLSLPKASSRTVPSSEPTAAASTLRLQSAAKSKVSVRQRLGRPSATEADTQDNKVTSTKSRGSPEFTVTIKNTARTAVSTKVTSSTEGRLAQMDSTGTVSVFERLGKKLK
SIO_010081: c41h19orf47
subclass of: SO_0000673
so part of: c41h19orf47
location: join(3849316..3849334,3865719..3865806,3869903..3870017,3877094..3877175,3879585..3879713,3881097..3881168,3881571..3881641,3889209..3889748)
location: region:3849316-3889748:1
so has part: feature:3849316-3849334:1:exon
so has part: feature:3865719-3865806:1:exon
so has part: feature:3869903-3870017:1:exon
so has part: feature:3877094-3877175:1:exon
so has part: feature:3879585-3879713:1:exon
so has part: feature:3881097-3881168:1:exon
so has part: feature:3881571-3881641:1:exon
so has part: feature:3889209-3889748:1:exon

XP_043536699.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3849316-3849334:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3865719-3865806:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3869903-3870017:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3877094-3877175:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3879585-3879713:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3881097-3881168:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3881571-3881641:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3889209-3889748:1:exon

c41h19orf47
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: c41h19orf47
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C19orf47 homolog isoform X4
translation: MVSVTLATSEWIQFFKDAGIPPGPAVNYAVSFVDNRIQKNMLMDLTKDIMNELGISVVGDIIAILKHAKVVYKQELAKLATESISTSHGNVQIDLKRTANSLLSRPADPGPETSAKRRRVTAEMEGKYIINMPKGTTAKTKKILEQQASKGLPRLSVFDRLGAEAKADTTTGNKPTGVFSRLGEVVNQKKESSDEDDAESVLQYAGVLKRAPAATAKESTKLTLTTTEKILAAKAKNTVTTIRRLSLPKASSRTVPSSEPTAAASTLRLQSAAKSKVSVRQRLGRPSATEADTQDNKVTSTKSRGSPEFTVTIKNTARTAVSTKVTSSTEGRLAQMDSTGTVSVFERLGKKLK
SIO_010081: c41h19orf47
subclass of: SO_0000673
so part of: c41h19orf47
location: join(3849316..3849334,3865719..3865806,3869903..3870017,3877094..3877175,3881097..3881243,3881571..3881641,3889209..3889748)
location: region:3849316-3889748:1
so has part: feature:3849316-3849334:1:exon
so has part: feature:3865719-3865806:1:exon
so has part: feature:3869903-3870017:1:exon
so has part: feature:3877094-3877175:1:exon
so has part: feature:3881097-3881243:1:exon
so has part: feature:3881571-3881641:1:exon
so has part: feature:3889209-3889748:1:exon

XP_043536701.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3849316-3849334:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3865719-3865806:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3869903-3870017:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3877094-3877175:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3881097-3881243:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3881571-3881641:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3889209-3889748:1:exon

c41h19orf47
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: c41h19orf47
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C19orf47 homolog isoform X5
translation: MVSVTLATSEWIQFFKDAGIPPGPAVNYAVSFVDNRIQKNMLMDLTKDIMNELGISVVGDIIAILKHAKVVYKQELAKLATESISTSHGNVQIDLKRTANSLLSRPADPGPETSAKRRRVTAEMEGLPRLSVFDRLGAEAKADTTTGNKPTGVFSRLGEVVNQKKESSDEDDAESVLQYAGVLKRAPAATAKESTKLTLTTTEKILAAKAKNTVTTIRRLSLPKASSRTVPSSEPTAAASTLRLQSAAKSKVSVRQRLGRPSATEADTQDNKVTSTKSRGSPEFTVTIKNTARTAVSTKVTSSTEGRLAQMDSTGTVSVFERLGKKLK
SIO_010081: c41h19orf47
subclass of: SO_0000673
so part of: c41h19orf47
location: join(3849316..3849334,3865719..3865806,3869903..3870017,3877094..3877175,3881097..3881168,3881571..3881641,3889209..3889748)
location: region:3849316-3889748:1
so has part: feature:3849316-3849334:1:exon
so has part: feature:3865719-3865806:1:exon
so has part: feature:3869903-3870017:1:exon
so has part: feature:3877094-3877175:1:exon
so has part: feature:3881097-3881168:1:exon
so has part: feature:3881571-3881641:1:exon
so has part: feature:3889209-3889748:1:exon

XP_043536703.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3849316-3849334:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3865719-3865806:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3869903-3870017:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3877094-3877175:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3881097-3881168:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3881571-3881641:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3889209-3889748:1:exon

c41h19orf47
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: c41h19orf47
product: chromosome 41 C19orf47 homolog, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680765.1
SIO_010081: c41h19orf47
subclass of: SO_0000673
so part of: c41h19orf47
location: join(3876694..3876787,3877094..3877175,3879585..3879713,3881097..3881243,3881571..3881641,3889209..3892445)
location: region:3876694-3892445:1
so has part: feature:3876694-3876787:1:exon
so has part: feature:3877094-3877175:1:exon
so has part: feature:3879585-3879713:1:exon
so has part: feature:3881097-3881243:1:exon
so has part: feature:3881571-3881641:1:exon
so has part: feature:3889209-3892445:1:exon

position:3876694:1
position: 3876694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3876694-3876787:1:exon

position:3876787:1
position: 3876787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3877094-3877175:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3879585-3879713:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3881097-3881243:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3881571-3881641:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3889209-3892445:1:exon

c41h19orf47
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: c41h19orf47
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C19orf47 homolog isoform X3
translation: MFLSSQPHRILKQATLWELAKLATESISTSHGNVQIDLKRTANSPASRMIANSLSRESPPSTPVRRPETSTSKISVTVANKLATKKAVLSRPADPGPETSAKRRRVTAEMEGKYIINMPKGTTAKTKKILEQQASKGLPRLSVFDRLGAEAKADTTTGNKPTGVFSRLGEVVNQKKESSDEDDAESVLQYAGVLKRAPAATAKESTKLTLTTTEKILAAKAKNTVTTIRRLSLPKASSRTVPSSEPTAAASTLRLQSAAKSKVSVRQRLGRPSATEADTQDNKVTSTKSRGSPEFTVTIKNTARTAVSTKVTSSTEGRLAQMDSTGTVSVFERLGKKLK
SIO_010081: c41h19orf47
subclass of: SO_0000673
so part of: c41h19orf47
location: join(3876737..3876787,3877094..3877175,3879585..3879713,3881097..3881243,3881571..3881641,3889209..3889748)
location: region:3876737-3889748:1
so has part: feature:3876737-3876787:1:exon
so has part: feature:3877094-3877175:1:exon
so has part: feature:3879585-3879713:1:exon
so has part: feature:3881097-3881243:1:exon
so has part: feature:3881571-3881641:1:exon
so has part: feature:3889209-3889748:1:exon

XP_043536700.1
type: Protein
SIO_000068: ncbiprotein

position:3876737:1
position: 3876737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3876737-3876787:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3877094-3877175:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3879585-3879713:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3881097-3881243:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3881571-3881641:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3889209-3889748:1:exon

ttc9b
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: ttc9b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3902263..3929339
location: region:3902263-3929339:1
so has part: feature:3902263-3929339:1:exon
subclass of: SO_0000010

122542760
type: Gene
SIO_000068: ncbigene

position:3902263:1
position: 3902263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3929339:1
position: 3929339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3902263-3929339:1:exon

ttc9b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: ttc9b
product: tetratricopeptide repeat domain 9B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_043680769.1
SIO_010081: ttc9b
subclass of: SO_0000673
so part of: ttc9b
location: join(3902263..3903485,3926722..3926904,3928505..3929339)
location: region:3902263-3929339:1
so has part: feature:3902263-3903485:1:exon
so has part: feature:3926722-3926904:1:exon
so has part: feature:3928505-3929339:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3902263-3903485:1:exon

position:3903485:1
position: 3903485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3926722-3926904:1:exon

position:3926722:1
position: 3926722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3926904:1
position: 3926904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3928505-3929339:1:exon

position:3928505:1
position: 3928505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ttc9b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: ttc9b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 9B
translation: MHSKLLQTIKRRQVSDLVRNGLPVGEMEAKNPLKAQSISLGGISKRQPGTGARAVGQPSASSRDQGRAAADIRNPPAQRRDGEAESTNKIQKAVSFKTEGNQCYREKKFREAIGKYHRALLQLKGIKISEAAAAEMNALSKTHIRLTEEEKRLIESTEIDCYDSLAACLLQSELVNYERVKEYCLKILGKHKDNFKAMYRAGIAFYHLGDCESALQYLKEAKDREPTDTNVFRYIQLTEIKMNRSNQREQEGSKEMIG
SIO_010081: ttc9b
subclass of: SO_0000673
so part of: ttc9b
location: join(3902987..3903485,3926722..3926904,3928505..3928599)
location: region:3902987-3928599:1
so has part: feature:3902987-3903485:1:exon
so has part: feature:3926722-3926904:1:exon
so has part: feature:3928505-3928599:1:exon

XP_043536704.1
type: Protein
SIO_000068: ncbiprotein

position:3902987:1
position: 3902987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3928599:1
position: 3928599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3902987-3903485:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3926722-3926904:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3928505-3928599:1:exon

map3k10
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: map3k10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3946728..4018609)
location: region:3946728-4018609:-1
so has part: feature:3946728-4018609:-1:exon
subclass of: SO_0000010

122542684
type: Gene
SIO_000068: ncbigene

position:3946728:-1
position: 3946728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4018609:-1
position: 4018609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3946728-4018609:-1:exon

map3k10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: map3k10
product: mitogen-activated protein kinase kinase kinase 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_043680662.1
SIO_010081: map3k10
subclass of: SO_0000673
so part of: map3k10
location: complement(join(3946728..3948836,3950929..3951648,3953311..3953423,3955948..3956086,3958953..3959075,3961249..3961489,3967479..3967660,4017237..4018609))
location: region:3946728-4018609:-1
so has part: feature:4017237-4018609:-1:exon
so has part: feature:3967479-3967660:-1:exon
so has part: feature:3961249-3961489:-1:exon
so has part: feature:3958953-3959075:-1:exon
so has part: feature:3955948-3956086:-1:exon
so has part: feature:3953311-3953423:-1:exon
so has part: feature:3950929-3951648:-1:exon
so has part: feature:3946728-3948836:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4017237-4018609:-1:exon

position:4017237:-1
position: 4017237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3967479-3967660:-1:exon

position:3967479:-1
position: 3967479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3967660:-1
position: 3967660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3961249-3961489:-1:exon

position:3961249:-1
position: 3961249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3961489:-1
position: 3961489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3958953-3959075:-1:exon

position:3958953:-1
position: 3958953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3959075:-1
position: 3959075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3955948-3956086:-1:exon

position:3955948:-1
position: 3955948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3956086:-1
position: 3956086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3953311-3953423:-1:exon

position:3953311:-1
position: 3953311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3953423:-1
position: 3953423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3950929-3951648:-1:exon

position:3950929:-1
position: 3950929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3951648:-1
position: 3951648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3946728-3948836:-1:exon

position:3948836:-1
position: 3948836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

map3k10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: map3k10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase kinase kinase 10
translation: MRKPGWSTMEPAAMSSSKSPATEAATCNGDHQQESPSLQAPGCCQLLLPKPPPPPPAAAAAAAPGSRSFWTAVFDYESTADEELTLRRGDVVELLSKDSHVSGDEGWWTGKIQDKVGIFPSNYVSSHPAYGGFRGGEELPLPPVIDFNELLLEEIIGVGGFGKVYKGTWGRDEVAVKAARQDPDEDISVTADNVRREARLFGMLRHPNIILLKGVCLKEPNLCLVMEYARGGALNRALAGRKVPPHVLVNWAVQIARGMNYLHNEAVVPVIHRDLKSSNILILEKADSDDLTNKTLKITDFGLAREWHRTTKMSAAGTYAWMAPEVIKLSLFSKSSDVWRELRSWEEELSRAAIQQRNHEEVLRRREQELAEREIDIVERELNIIMRQLYQEKPKVKKRKGNFKKSRLKLKDGNRISLPSGFEHKITVQASPTMDKWKGQATDGSSPPGSPIIIPRLRAIRLTPGEGSQTWGRSAVYKREEFEGHKKKGRTWGPSSTQQKERLGGEDRLRCLGDGSKFWSSSAPSLGKTPRHIPITMGFASLTEMEGQSPVGGRFQSPSQSPVTLGCQDSETSLTDDSSPVTHGPSADSFKRSPQRRRNELVLLGCANILSSVALSCDLVSLGRQQMLHDEQEKRREGIFQRTGRCRSSDSPPSRLAHRKESVLPSLEASSSVTLLSLSSVSDCNSTRSLLQSDSDEAGTWATPDGTESPNQAPPVNPLLDLTVETFKRNPEQSLTPTHVSAASAVKRGHRRIPSDSAIRQQAQVQVQTHRRSPSDSSTHNFVDTGVPKDSTEIPRLPDPNSFLPPILRRKTLERDAALERPKTLEFAPRPRPSASRPRIDPWRFVSFTRTHSASPGSSTETPSNTDSGDERLGTSCPSALDTGCVRSLLDIDLEGQVADGTVPLCQADLALHKKSIYSVEEGHMR
SIO_010081: map3k10
subclass of: SO_0000673
so part of: map3k10
location: complement(join(3948412..3948836,3950929..3951648,3953311..3953423,3955948..3956086,3958953..3959075,3961249..3961489,3967479..3967660,4017237..4018074))
location: region:3948412-4018074:-1
so has part: feature:4017237-4018074:-1:exon
so has part: feature:3967479-3967660:-1:exon
so has part: feature:3961249-3961489:-1:exon
so has part: feature:3958953-3959075:-1:exon
so has part: feature:3955948-3956086:-1:exon
so has part: feature:3953311-3953423:-1:exon
so has part: feature:3950929-3951648:-1:exon
so has part: feature:3948412-3948836:-1:exon

XP_043536597.1
type: Protein
SIO_000068: ncbiprotein

position:3948412:-1
position: 3948412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4018074:-1
position: 4018074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4017237-4018074:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3967479-3967660:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3961249-3961489:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3958953-3959075:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3955948-3956086:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3953311-3953423:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3950929-3951648:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3948412-3948836:-1:exon

LOC122542761
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: LOC122542761
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4035713..4059827)
location: region:4035713-4059827:-1
so has part: feature:4035713-4059827:-1:exon
subclass of: SO_0000010

122542761
type: Gene
SIO_000068: ncbigene

position:4035713:-1
position: 4035713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4059827:-1
position: 4059827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4035713-4059827:-1:exon

LOC122542761
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542761
product: uncharacterized LOC122542761
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_043680770.1
SIO_010081: LOC122542761
subclass of: SO_0000673
so part of: LOC122542761
location: complement(join(4035713..4036639,4049678..4049913,4059638..4059827))
location: region:4035713-4059827:-1
so has part: feature:4059638-4059827:-1:exon
so has part: feature:4049678-4049913:-1:exon
so has part: feature:4035713-4036639:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4059638-4059827:-1:exon

position:4059638:-1
position: 4059638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4049678-4049913:-1:exon

position:4049678:-1
position: 4049678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4049913:-1
position: 4049913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4035713-4036639:-1:exon

position:4036639:-1
position: 4036639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC122542761
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542761
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC122542761
translation: MSQHSPVPNCASRTESIRTGDVQGTHLMISILLDDDDPGLHVDGAASSVKPSHMEHDDSVSTSRTSSLSFPVEAQLDEDNLKKIGKNAKLSEAQGLRWSSHVTTLRMSYSAPAVLSTVSPRDGLRENLKEKLKAEPLSHVSNLSAFLLRKDKVPHMVSPVETQHIPFIIGSKRVGGKSGTAYRTNQQNISNEGADIFSLVNKPPSNEHQRYRINIADDSTESDWNSVCSLINPSKRNGGNQDNWRETLYALIRCYGFKSCKERKATAGIAAQRASTQLRKPTQTCVQRISHGQRVLSQIAFRSPRKAPDEKSWHVIPMPWQQSFVTMMQGGVSQFGALELIWLSSDFK
SIO_010081: LOC122542761
subclass of: SO_0000673
so part of: LOC122542761
location: complement(join(4035807..4036639,4049678..4049891))
location: region:4035807-4049891:-1
so has part: feature:4049678-4049891:-1:exon
so has part: feature:4035807-4036639:-1:exon

XP_043536705.1
type: Protein
SIO_000068: ncbiprotein

position:4035807:-1
position: 4035807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4049891:-1
position: 4049891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4049678-4049891:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4035807-4036639:-1:exon

sipa1l3
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: sipa1l3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4060176..4300437
location: region:4060176-4300437:1
so has part: feature:4060176-4300437:1:exon
subclass of: SO_0000010

122542762
type: Gene
SIO_000068: ncbigene

position:4060176:1
position: 4060176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4300437:1
position: 4300437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4060176-4300437:1:exon

sipa1l3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: sipa1l3
product: signal-induced proliferation-associated 1 like 3, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680772.1
SIO_010081: sipa1l3
subclass of: SO_0000673
so part of: sipa1l3
location: join(4060176..4060236,4146630..4146739,4198491..4200273,4203085..4203215,4204262..4204450,4205708..4205882,4206925..4207028,4212282..4212439,4214172..4214748,4216918..4217192,4232497..4232745,4235374..4235517,4249186..4249319,4252332..4252450,4254408..4254850,4264887..4265096,4277154..4277319,4278232..4278439,4279711..4279857,4285888..4286017,4293029..4293110,4296962..4300437)
location: region:4060176-4300437:1
so has part: feature:4060176-4060236:1:exon
so has part: feature:4146630-4146739:1:exon
so has part: feature:4198491-4200273:1:exon
so has part: feature:4203085-4203215:1:exon
so has part: feature:4204262-4204450:1:exon
so has part: feature:4205708-4205882:1:exon
so has part: feature:4206925-4207028:1:exon
so has part: feature:4212282-4212439:1:exon
so has part: feature:4214172-4214748:1:exon
so has part: feature:4216918-4217192:1:exon
so has part: feature:4232497-4232745:1:exon
so has part: feature:4235374-4235517:1:exon
so has part: feature:4249186-4249319:1:exon
so has part: feature:4252332-4252450:1:exon
so has part: feature:4254408-4254850:1:exon
so has part: feature:4264887-4265096:1:exon
so has part: feature:4277154-4277319:1:exon
so has part: feature:4278232-4278439:1:exon
so has part: feature:4279711-4279857:1:exon
so has part: feature:4285888-4286017:1:exon
so has part: feature:4293029-4293110:1:exon
so has part: feature:4296962-4300437:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4060176-4060236:1:exon

position:4060236:1
position: 4060236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4146630-4146739:1:exon

position:4146630:1
position: 4146630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4146739:1
position: 4146739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4198491-4200273:1:exon

position:4198491:1
position: 4198491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4200273:1
position: 4200273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4203085-4203215:1:exon

position:4203085:1
position: 4203085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4203215:1
position: 4203215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4204262-4204450:1:exon

position:4204262:1
position: 4204262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4204450:1
position: 4204450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4205708-4205882:1:exon

position:4205708:1
position: 4205708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4205882:1
position: 4205882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4206925-4207028:1:exon

position:4206925:1
position: 4206925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4207028:1
position: 4207028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4212282-4212439:1:exon

position:4212282:1
position: 4212282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4212439:1
position: 4212439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4214172-4214748:1:exon

position:4214172:1
position: 4214172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4214748:1
position: 4214748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4216918-4217192:1:exon

position:4216918:1
position: 4216918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4217192:1
position: 4217192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4232497-4232745:1:exon

position:4232497:1
position: 4232497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4232745:1
position: 4232745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4235374-4235517:1:exon

position:4235374:1
position: 4235374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4235517:1
position: 4235517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4249186-4249319:1:exon

position:4249186:1
position: 4249186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4249319:1
position: 4249319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4252332-4252450:1:exon

position:4252332:1
position: 4252332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4252450:1
position: 4252450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4254408-4254850:1:exon

position:4254408:1
position: 4254408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4254850:1
position: 4254850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4264887-4265096:1:exon

position:4264887:1
position: 4264887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4265096:1
position: 4265096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4277154-4277319:1:exon

position:4277154:1
position: 4277154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4277319:1
position: 4277319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4278232-4278439:1:exon

position:4278232:1
position: 4278232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4278439:1
position: 4278439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4279711-4279857:1:exon

position:4279711:1
position: 4279711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4279857:1
position: 4279857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4285888-4286017:1:exon

position:4285888:1
position: 4285888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4286017:1
position: 4286017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4293029-4293110:1:exon

position:4293029:1
position: 4293029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4293110:1
position: 4293110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4296962-4300437:1:exon

position:4296962:1
position: 4296962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

sipa1l3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: sipa1l3
product: signal-induced proliferation-associated 1 like 3, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680771.1
SIO_010081: sipa1l3
subclass of: SO_0000673
so part of: sipa1l3
location: join(4060258..4060441,4146630..4146739,4198491..4200273,4203085..4203215,4204262..4204450,4205708..4205882,4206925..4207028,4212282..4212439,4214172..4214748,4216918..4217192,4232497..4232745,4235374..4235517,4249186..4249319,4252332..4252450,4254408..4254850,4264887..4265096,4277154..4277319,4278232..4278439,4279711..4279857,4285888..4286017,4293029..4293110,4296962..4300437)
location: region:4060258-4300437:1
so has part: feature:4060258-4060441:1:exon
so has part: feature:4146630-4146739:1:exon
so has part: feature:4198491-4200273:1:exon
so has part: feature:4203085-4203215:1:exon
so has part: feature:4204262-4204450:1:exon
so has part: feature:4205708-4205882:1:exon
so has part: feature:4206925-4207028:1:exon
so has part: feature:4212282-4212439:1:exon
so has part: feature:4214172-4214748:1:exon
so has part: feature:4216918-4217192:1:exon
so has part: feature:4232497-4232745:1:exon
so has part: feature:4235374-4235517:1:exon
so has part: feature:4249186-4249319:1:exon
so has part: feature:4252332-4252450:1:exon
so has part: feature:4254408-4254850:1:exon
so has part: feature:4264887-4265096:1:exon
so has part: feature:4277154-4277319:1:exon
so has part: feature:4278232-4278439:1:exon
so has part: feature:4279711-4279857:1:exon
so has part: feature:4285888-4286017:1:exon
so has part: feature:4293029-4293110:1:exon
so has part: feature:4296962-4300437:1:exon

position:4060258:1
position: 4060258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4060258-4060441:1:exon

position:4060441:1
position: 4060441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4146630-4146739:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4198491-4200273:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4203085-4203215:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4204262-4204450:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4205708-4205882:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4206925-4207028:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4212282-4212439:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4214172-4214748:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4216918-4217192:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4232497-4232745:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4235374-4235517:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4249186-4249319:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4252332-4252450:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4254408-4254850:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4264887-4265096:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4277154-4277319:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4278232-4278439:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4279711-4279857:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4285888-4286017:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4293029-4293110:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4296962-4300437:1:exon

sipa1l3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: sipa1l3
product: signal-induced proliferation-associated 1 like 3, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680774.1
SIO_010081: sipa1l3
subclass of: SO_0000673
so part of: sipa1l3
location: join(4060258..4060441,4146630..4146739,4198491..4200273,4203085..4203215,4204262..4204450,4205708..4205882,4206925..4207028,4212282..4212439,4214172..4214748,4216918..4217192,4232497..4232745,4235374..4235517,4249186..4249319,4252332..4252450,4254408..4254850,4277154..4277319,4278232..4278439,4279711..4279857,4285888..4286017,4293029..4293110,4296962..4300437)
location: region:4060258-4300437:1
so has part: feature:4060258-4060441:1:exon
so has part: feature:4146630-4146739:1:exon
so has part: feature:4198491-4200273:1:exon
so has part: feature:4203085-4203215:1:exon
so has part: feature:4204262-4204450:1:exon
so has part: feature:4205708-4205882:1:exon
so has part: feature:4206925-4207028:1:exon
so has part: feature:4212282-4212439:1:exon
so has part: feature:4214172-4214748:1:exon
so has part: feature:4216918-4217192:1:exon
so has part: feature:4232497-4232745:1:exon
so has part: feature:4235374-4235517:1:exon
so has part: feature:4249186-4249319:1:exon
so has part: feature:4252332-4252450:1:exon
so has part: feature:4254408-4254850:1:exon
so has part: feature:4277154-4277319:1:exon
so has part: feature:4278232-4278439:1:exon
so has part: feature:4279711-4279857:1:exon
so has part: feature:4285888-4286017:1:exon
so has part: feature:4293029-4293110:1:exon
so has part: feature:4296962-4300437:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4060258-4060441:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4146630-4146739:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4198491-4200273:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4203085-4203215:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4204262-4204450:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4205708-4205882:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4206925-4207028:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4212282-4212439:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4214172-4214748:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4216918-4217192:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4232497-4232745:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4235374-4235517:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4249186-4249319:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4252332-4252450:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4254408-4254850:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4277154-4277319:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4278232-4278439:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4279711-4279857:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4285888-4286017:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4293029-4293110:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4296962-4300437:1:exon

sipa1l3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: sipa1l3
product: signal-induced proliferation-associated 1 like 3, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680773.1
SIO_010081: sipa1l3
subclass of: SO_0000673
so part of: sipa1l3
location: join(4152605..4152623,4198491..4200273,4203085..4203215,4204262..4204450,4205708..4205882,4206925..4207028,4212282..4212439,4214172..4214748,4216918..4217192,4232497..4232745,4235374..4235517,4249186..4249319,4252332..4252450,4254408..4254850,4264887..4265096,4277154..4277319,4278232..4278439,4279711..4279857,4285888..4286017,4293029..4293110,4296962..4300437)
location: region:4152605-4300437:1
so has part: feature:4152605-4152623:1:exon
so has part: feature:4198491-4200273:1:exon
so has part: feature:4203085-4203215:1:exon
so has part: feature:4204262-4204450:1:exon
so has part: feature:4205708-4205882:1:exon
so has part: feature:4206925-4207028:1:exon
so has part: feature:4212282-4212439:1:exon
so has part: feature:4214172-4214748:1:exon
so has part: feature:4216918-4217192:1:exon
so has part: feature:4232497-4232745:1:exon
so has part: feature:4235374-4235517:1:exon
so has part: feature:4249186-4249319:1:exon
so has part: feature:4252332-4252450:1:exon
so has part: feature:4254408-4254850:1:exon
so has part: feature:4264887-4265096:1:exon
so has part: feature:4277154-4277319:1:exon
so has part: feature:4278232-4278439:1:exon
so has part: feature:4279711-4279857:1:exon
so has part: feature:4285888-4286017:1:exon
so has part: feature:4293029-4293110:1:exon
so has part: feature:4296962-4300437:1:exon

position:4152605:1
position: 4152605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4152605-4152623:1:exon

position:4152623:1
position: 4152623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4198491-4200273:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4203085-4203215:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4204262-4204450:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4205708-4205882:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4206925-4207028:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4212282-4212439:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4214172-4214748:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4216918-4217192:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4232497-4232745:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4235374-4235517:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4249186-4249319:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4252332-4252450:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4254408-4254850:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4264887-4265096:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4277154-4277319:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4278232-4278439:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4279711-4279857:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4285888-4286017:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4293029-4293110:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4296962-4300437:1:exon

sipa1l3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: sipa1l3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal-induced proliferation-associated 1-like protein 3 isoform X1
translation: MTSYRPVQNAKVEVGGMVIGGVDFLEGTNTCDYYASPFRAQNGNICSLGENVPRANSTPAMPKMGVRARIADWPPKRDVTKDVGRDLGGSMVDTEFTSFHSGQYCLNYENASHPSQTRGLHRIPRGKSKEAEFQGYWPRSPAKMFVPLRVRSNSEVTLNEHDAEGALELKGNGMLPLREYGSTSSIDVSGVSSESFFDMLKEFKNEKIDQRSSVPENLKKLLRADLSMASNLNLAGNSKTDDSQSESSQRDEPKSTGKDRRKKQSRNESGESILKKLRSNKSEHESGRSSSDNEDNKSQDSNKPWVCQKSFAHFDVQSILFDLNEVVSNRNYVPYRRNTTTGASAASAASLAVSRSHALGGQDSGFTSTEEVNGKENLEPDLGDSNCNDLLLNCPHFRNETGGTCEHNISLSKASMNAGLGLGCDGGFLKVVWNPYCTNASVSELEVPKERHLSQERLKQFSIEHVDRGAKYYQDYFHGKEHWNYFGVDEKLGPVAVSIKREKLEDSKEHGLQYVYRIIFRTSELITLRGAILEDAVPSTSKHGTVRGLLLKEVLESVIPELNIQCLRLAFSTVKVTEQLLKLDEQGLSRKHKVGILYCMAGQGTEEEMYNNEEAGPAFEEFLEQLGEKVLLKGFTKYAAQLDTKTDSTGTHSLYTTYQDYEIMFHVSTMLPYTPNNRQQLLRKRHIGNDIVTIIFQEPGALPFTPKTVRSHFQHVFVIVRVHNPCTENVCYSVAVTRSKDVPLFGPPIPEGFSFSKSDVFRDFLLAKVINGENAAHKSEKFHAMATRTRHEYLKDLAENSVTNTPVESAGKFNLILLTTKKKEKTKPRVGAELYSAGAITWRVYAQDYSQGVEVECILGISNEFVVVIEQGTKEVVFNCFSGDVIGWTPDASTLKIFHGRGDYIFVRMLEENVDDIKEIVQRLKIVTEGCETIDMTLRRNGLGQLGFHVKYDGTVAEVEEYGFAWQAGLRQGSRLVEICKVAIITLTHDQMIDLLKTSVTVKVVIIPPHEDGNPRRGCSELYEMHNMDMKGENDNIPRGLRPPYRTNALQWSNPTTHSASPSQRWTGSTHNPISNWSQAPKQQGVPVAYSDSQAKNNKRPVSYPETIYSTASTAVERGQPFRNPSGSFSSPASGGILSSRQKAINDRFGGGAGQRSVVPYEHHNRDDVMSSGDSLSGGLTSQDSTIERNKNDPVWHVPTAPKVYSPSGNNINKRLARQELAGKDSPNRHSKGDAHYSSQSSSNTLSSNASSGHSDERWFDNMEHMEVDLETSAKGASSDSGIDTTLHASSPFASGAVTAKSARPAPRREKPQKPMQTSATYSGLQEYNNRVFDRTPPHLERRRDSSPTLSANGQNKGYKIKTCGPSNNTSFSNENMHLSTVNCRPGQTPHIYKTPPAEVSKPPAVHAQLSASAPKSFYSYQNVKNLCPTGWKKPTTTPCRSSGFAETKTTSSVVSTNVFGQPRLRASLRDLRSPRKSHKSTLEEDLKKLILLDNPLPEQDKEMLHSSRKALQRTLSDESICSGRREAGLSSSQIAALDQALPNDVIFTSTYPSQTLPTRRLTQPPAAINLEKKSNMSASELSLTDVRDRIPVRRTDPGLMPLPDTESELEWSSLVNVAKAYEVQRAVSLFSLTDASIGSEVGPAYPVHMHNTLERQSSPRVPHILSDEPALALTGKVYQLEIQLKQLQDDLLKEKEDKIVLQAEVANLRVNNQRLQEESHSATEQLRKFAEIFSSTIEKK
SIO_010081: sipa1l3
subclass of: SO_0000673
so part of: sipa1l3
location: join(4198833..4200273,4203085..4203215,4204262..4204450,4205708..4205882,4206925..4207028,4212282..4212439,4214172..4214748,4216918..4217192,4232497..4232745,4235374..4235517,4249186..4249319,4252332..4252450,4254408..4254850,4264887..4265096,4277154..4277319,4278232..4278439,4279711..4279857,4285888..4286017,4293029..4293110,4296962..4297105)
location: region:4198833-4297105:1
so has part: feature:4198833-4200273:1:exon
so has part: feature:4203085-4203215:1:exon
so has part: feature:4204262-4204450:1:exon
so has part: feature:4205708-4205882:1:exon
so has part: feature:4206925-4207028:1:exon
so has part: feature:4212282-4212439:1:exon
so has part: feature:4214172-4214748:1:exon
so has part: feature:4216918-4217192:1:exon
so has part: feature:4232497-4232745:1:exon
so has part: feature:4235374-4235517:1:exon
so has part: feature:4249186-4249319:1:exon
so has part: feature:4252332-4252450:1:exon
so has part: feature:4254408-4254850:1:exon
so has part: feature:4264887-4265096:1:exon
so has part: feature:4277154-4277319:1:exon
so has part: feature:4278232-4278439:1:exon
so has part: feature:4279711-4279857:1:exon
so has part: feature:4285888-4286017:1:exon
so has part: feature:4293029-4293110:1:exon
so has part: feature:4296962-4297105:1:exon

XP_043536706.1
type: Protein
SIO_000068: ncbiprotein

position:4198833:1
position: 4198833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4297105:1
position: 4297105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4198833-4200273:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4203085-4203215:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4204262-4204450:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4205708-4205882:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4206925-4207028:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4212282-4212439:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4214172-4214748:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4216918-4217192:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4232497-4232745:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4235374-4235517:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4249186-4249319:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4252332-4252450:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4254408-4254850:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4264887-4265096:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4277154-4277319:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4278232-4278439:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4279711-4279857:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4285888-4286017:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4293029-4293110:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4296962-4297105:1:exon

sipa1l3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: sipa1l3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal-induced proliferation-associated 1-like protein 3 isoform X1
translation: MTSYRPVQNAKVEVGGMVIGGVDFLEGTNTCDYYASPFRAQNGNICSLGENVPRANSTPAMPKMGVRARIADWPPKRDVTKDVGRDLGGSMVDTEFTSFHSGQYCLNYENASHPSQTRGLHRIPRGKSKEAEFQGYWPRSPAKMFVPLRVRSNSEVTLNEHDAEGALELKGNGMLPLREYGSTSSIDVSGVSSESFFDMLKEFKNEKIDQRSSVPENLKKLLRADLSMASNLNLAGNSKTDDSQSESSQRDEPKSTGKDRRKKQSRNESGESILKKLRSNKSEHESGRSSSDNEDNKSQDSNKPWVCQKSFAHFDVQSILFDLNEVVSNRNYVPYRRNTTTGASAASAASLAVSRSHALGGQDSGFTSTEEVNGKENLEPDLGDSNCNDLLLNCPHFRNETGGTCEHNISLSKASMNAGLGLGCDGGFLKVVWNPYCTNASVSELEVPKERHLSQERLKQFSIEHVDRGAKYYQDYFHGKEHWNYFGVDEKLGPVAVSIKREKLEDSKEHGLQYVYRIIFRTSELITLRGAILEDAVPSTSKHGTVRGLLLKEVLESVIPELNIQCLRLAFSTVKVTEQLLKLDEQGLSRKHKVGILYCMAGQGTEEEMYNNEEAGPAFEEFLEQLGEKVLLKGFTKYAAQLDTKTDSTGTHSLYTTYQDYEIMFHVSTMLPYTPNNRQQLLRKRHIGNDIVTIIFQEPGALPFTPKTVRSHFQHVFVIVRVHNPCTENVCYSVAVTRSKDVPLFGPPIPEGFSFSKSDVFRDFLLAKVINGENAAHKSEKFHAMATRTRHEYLKDLAENSVTNTPVESAGKFNLILLTTKKKEKTKPRVGAELYSAGAITWRVYAQDYSQGVEVECILGISNEFVVVIEQGTKEVVFNCFSGDVIGWTPDASTLKIFHGRGDYIFVRMLEENVDDIKEIVQRLKIVTEGCETIDMTLRRNGLGQLGFHVKYDGTVAEVEEYGFAWQAGLRQGSRLVEICKVAIITLTHDQMIDLLKTSVTVKVVIIPPHEDGNPRRGCSELYEMHNMDMKGENDNIPRGLRPPYRTNALQWSNPTTHSASPSQRWTGSTHNPISNWSQAPKQQGVPVAYSDSQAKNNKRPVSYPETIYSTASTAVERGQPFRNPSGSFSSPASGGILSSRQKAINDRFGGGAGQRSVVPYEHHNRDDVMSSGDSLSGGLTSQDSTIERNKNDPVWHVPTAPKVYSPSGNNINKRLARQELAGKDSPNRHSKGDAHYSSQSSSNTLSSNASSGHSDERWFDNMEHMEVDLETSAKGASSDSGIDTTLHASSPFASGAVTAKSARPAPRREKPQKPMQTSATYSGLQEYNNRVFDRTPPHLERRRDSSPTLSANGQNKGYKIKTCGPSNNTSFSNENMHLSTVNCRPGQTPHIYKTPPAEVSKPPAVHAQLSASAPKSFYSYQNVKNLCPTGWKKPTTTPCRSSGFAETKTTSSVVSTNVFGQPRLRASLRDLRSPRKSHKSTLEEDLKKLILLDNPLPEQDKEMLHSSRKALQRTLSDESICSGRREAGLSSSQIAALDQALPNDVIFTSTYPSQTLPTRRLTQPPAAINLEKKSNMSASELSLTDVRDRIPVRRTDPGLMPLPDTESELEWSSLVNVAKAYEVQRAVSLFSLTDASIGSEVGPAYPVHMHNTLERQSSPRVPHILSDEPALALTGKVYQLEIQLKQLQDDLLKEKEDKIVLQAEVANLRVNNQRLQEESHSATEQLRKFAEIFSSTIEKK
SIO_010081: sipa1l3
subclass of: SO_0000673
so part of: sipa1l3
location: join(4198833..4200273,4203085..4203215,4204262..4204450,4205708..4205882,4206925..4207028,4212282..4212439,4214172..4214748,4216918..4217192,4232497..4232745,4235374..4235517,4249186..4249319,4252332..4252450,4254408..4254850,4264887..4265096,4277154..4277319,4278232..4278439,4279711..4279857,4285888..4286017,4293029..4293110,4296962..4297105)
location: region:4198833-4297105:1
so has part: feature:4198833-4200273:1:exon
so has part: feature:4203085-4203215:1:exon
so has part: feature:4204262-4204450:1:exon
so has part: feature:4205708-4205882:1:exon
so has part: feature:4206925-4207028:1:exon
so has part: feature:4212282-4212439:1:exon
so has part: feature:4214172-4214748:1:exon
so has part: feature:4216918-4217192:1:exon
so has part: feature:4232497-4232745:1:exon
so has part: feature:4235374-4235517:1:exon
so has part: feature:4249186-4249319:1:exon
so has part: feature:4252332-4252450:1:exon
so has part: feature:4254408-4254850:1:exon
so has part: feature:4264887-4265096:1:exon
so has part: feature:4277154-4277319:1:exon
so has part: feature:4278232-4278439:1:exon
so has part: feature:4279711-4279857:1:exon
so has part: feature:4285888-4286017:1:exon
so has part: feature:4293029-4293110:1:exon
so has part: feature:4296962-4297105:1:exon

XP_043536707.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4198833-4200273:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4203085-4203215:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4204262-4204450:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4205708-4205882:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4206925-4207028:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4212282-4212439:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4214172-4214748:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4216918-4217192:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4232497-4232745:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4235374-4235517:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4249186-4249319:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4252332-4252450:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4254408-4254850:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4264887-4265096:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4277154-4277319:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4278232-4278439:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4279711-4279857:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4285888-4286017:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4293029-4293110:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4296962-4297105:1:exon

sipa1l3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: sipa1l3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal-induced proliferation-associated 1-like protein 3 isoform X1
translation: MTSYRPVQNAKVEVGGMVIGGVDFLEGTNTCDYYASPFRAQNGNICSLGENVPRANSTPAMPKMGVRARIADWPPKRDVTKDVGRDLGGSMVDTEFTSFHSGQYCLNYENASHPSQTRGLHRIPRGKSKEAEFQGYWPRSPAKMFVPLRVRSNSEVTLNEHDAEGALELKGNGMLPLREYGSTSSIDVSGVSSESFFDMLKEFKNEKIDQRSSVPENLKKLLRADLSMASNLNLAGNSKTDDSQSESSQRDEPKSTGKDRRKKQSRNESGESILKKLRSNKSEHESGRSSSDNEDNKSQDSNKPWVCQKSFAHFDVQSILFDLNEVVSNRNYVPYRRNTTTGASAASAASLAVSRSHALGGQDSGFTSTEEVNGKENLEPDLGDSNCNDLLLNCPHFRNETGGTCEHNISLSKASMNAGLGLGCDGGFLKVVWNPYCTNASVSELEVPKERHLSQERLKQFSIEHVDRGAKYYQDYFHGKEHWNYFGVDEKLGPVAVSIKREKLEDSKEHGLQYVYRIIFRTSELITLRGAILEDAVPSTSKHGTVRGLLLKEVLESVIPELNIQCLRLAFSTVKVTEQLLKLDEQGLSRKHKVGILYCMAGQGTEEEMYNNEEAGPAFEEFLEQLGEKVLLKGFTKYAAQLDTKTDSTGTHSLYTTYQDYEIMFHVSTMLPYTPNNRQQLLRKRHIGNDIVTIIFQEPGALPFTPKTVRSHFQHVFVIVRVHNPCTENVCYSVAVTRSKDVPLFGPPIPEGFSFSKSDVFRDFLLAKVINGENAAHKSEKFHAMATRTRHEYLKDLAENSVTNTPVESAGKFNLILLTTKKKEKTKPRVGAELYSAGAITWRVYAQDYSQGVEVECILGISNEFVVVIEQGTKEVVFNCFSGDVIGWTPDASTLKIFHGRGDYIFVRMLEENVDDIKEIVQRLKIVTEGCETIDMTLRRNGLGQLGFHVKYDGTVAEVEEYGFAWQAGLRQGSRLVEICKVAIITLTHDQMIDLLKTSVTVKVVIIPPHEDGNPRRGCSELYEMHNMDMKGENDNIPRGLRPPYRTNALQWSNPTTHSASPSQRWTGSTHNPISNWSQAPKQQGVPVAYSDSQAKNNKRPVSYPETIYSTASTAVERGQPFRNPSGSFSSPASGGILSSRQKAINDRFGGGAGQRSVVPYEHHNRDDVMSSGDSLSGGLTSQDSTIERNKNDPVWHVPTAPKVYSPSGNNINKRLARQELAGKDSPNRHSKGDAHYSSQSSSNTLSSNASSGHSDERWFDNMEHMEVDLETSAKGASSDSGIDTTLHASSPFASGAVTAKSARPAPRREKPQKPMQTSATYSGLQEYNNRVFDRTPPHLERRRDSSPTLSANGQNKGYKIKTCGPSNNTSFSNENMHLSTVNCRPGQTPHIYKTPPAEVSKPPAVHAQLSASAPKSFYSYQNVKNLCPTGWKKPTTTPCRSSGFAETKTTSSVVSTNVFGQPRLRASLRDLRSPRKSHKSTLEEDLKKLILLDNPLPEQDKEMLHSSRKALQRTLSDESICSGRREAGLSSSQIAALDQALPNDVIFTSTYPSQTLPTRRLTQPPAAINLEKKSNMSASELSLTDVRDRIPVRRTDPGLMPLPDTESELEWSSLVNVAKAYEVQRAVSLFSLTDASIGSEVGPAYPVHMHNTLERQSSPRVPHILSDEPALALTGKVYQLEIQLKQLQDDLLKEKEDKIVLQAEVANLRVNNQRLQEESHSATEQLRKFAEIFSSTIEKK
SIO_010081: sipa1l3
subclass of: SO_0000673
so part of: sipa1l3
location: join(4198833..4200273,4203085..4203215,4204262..4204450,4205708..4205882,4206925..4207028,4212282..4212439,4214172..4214748,4216918..4217192,4232497..4232745,4235374..4235517,4249186..4249319,4252332..4252450,4254408..4254850,4264887..4265096,4277154..4277319,4278232..4278439,4279711..4279857,4285888..4286017,4293029..4293110,4296962..4297105)
location: region:4198833-4297105:1
so has part: feature:4198833-4200273:1:exon
so has part: feature:4203085-4203215:1:exon
so has part: feature:4204262-4204450:1:exon
so has part: feature:4205708-4205882:1:exon
so has part: feature:4206925-4207028:1:exon
so has part: feature:4212282-4212439:1:exon
so has part: feature:4214172-4214748:1:exon
so has part: feature:4216918-4217192:1:exon
so has part: feature:4232497-4232745:1:exon
so has part: feature:4235374-4235517:1:exon
so has part: feature:4249186-4249319:1:exon
so has part: feature:4252332-4252450:1:exon
so has part: feature:4254408-4254850:1:exon
so has part: feature:4264887-4265096:1:exon
so has part: feature:4277154-4277319:1:exon
so has part: feature:4278232-4278439:1:exon
so has part: feature:4279711-4279857:1:exon
so has part: feature:4285888-4286017:1:exon
so has part: feature:4293029-4293110:1:exon
so has part: feature:4296962-4297105:1:exon

XP_043536708.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4198833-4200273:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4203085-4203215:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4204262-4204450:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4205708-4205882:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4206925-4207028:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4212282-4212439:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4214172-4214748:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4216918-4217192:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4232497-4232745:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4235374-4235517:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4249186-4249319:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4252332-4252450:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4254408-4254850:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4264887-4265096:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4277154-4277319:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4278232-4278439:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4279711-4279857:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4285888-4286017:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4293029-4293110:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4296962-4297105:1:exon

sipa1l3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: sipa1l3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal-induced proliferation-associated 1-like protein 3 isoform X2
translation: MTSYRPVQNAKVEVGGMVIGGVDFLEGTNTCDYYASPFRAQNGNICSLGENVPRANSTPAMPKMGVRARIADWPPKRDVTKDVGRDLGGSMVDTEFTSFHSGQYCLNYENASHPSQTRGLHRIPRGKSKEAEFQGYWPRSPAKMFVPLRVRSNSEVTLNEHDAEGALELKGNGMLPLREYGSTSSIDVSGVSSESFFDMLKEFKNEKIDQRSSVPENLKKLLRADLSMASNLNLAGNSKTDDSQSESSQRDEPKSTGKDRRKKQSRNESGESILKKLRSNKSEHESGRSSSDNEDNKSQDSNKPWVCQKSFAHFDVQSILFDLNEVVSNRNYVPYRRNTTTGASAASAASLAVSRSHALGGQDSGFTSTEEVNGKENLEPDLGDSNCNDLLLNCPHFRNETGGTCEHNISLSKASMNAGLGLGCDGGFLKVVWNPYCTNASVSELEVPKERHLSQERLKQFSIEHVDRGAKYYQDYFHGKEHWNYFGVDEKLGPVAVSIKREKLEDSKEHGLQYVYRIIFRTSELITLRGAILEDAVPSTSKHGTVRGLLLKEVLESVIPELNIQCLRLAFSTVKVTEQLLKLDEQGLSRKHKVGILYCMAGQGTEEEMYNNEEAGPAFEEFLEQLGEKVLLKGFTKYAAQLDTKTDSTGTHSLYTTYQDYEIMFHVSTMLPYTPNNRQQLLRKRHIGNDIVTIIFQEPGALPFTPKTVRSHFQHVFVIVRVHNPCTENVCYSVAVTRSKDVPLFGPPIPEGFSFSKSDVFRDFLLAKVINGENAAHKSEKFHAMATRTRHEYLKDLAENSVTNTPVESAGKFNLILLTTKKKEKTKPRVGAELYSAGAITWRVYAQDYSQGVEVECILGISNEFVVVIEQGTKEVVFNCFSGDVIGWTPDASTLKIFHGRGDYIFVRMLEENVDDIKEIVQRLKIVTEGCETIDMTLRRNGLGQLGFHVKYDGTVAEVEEYGFAWQAGLRQGSRLVEICKVAIITLTHDQMIDLLKTSVTVKVVIIPPHEDGNPRRGCSELYEMHNMDMKGENDNIPRGLRPPYRTNALQWSNPTTHSASPSQRWTGSTHNPISNWSQAPKQQGVPVAYSDSQAKNNKRPVSYPETIYSTASTAVERGQPFRNPSGSFSSPASGGILSSRQKAINDRFGGGAGQRSVVPYEHHNRDDVMSSGDSLSGGLTSQDSTIERNKNDPVWHVPTAPKVYSPSGNNINKRLARQELAGKDSPNRHSKGDAHYSSQSSSNTLSSNASSGHSDERWFDNMEHMEVDLETSAKGASSDSGIDTTLHASSPFASGAVTAKSARPAPRREKPQKPMQTSATYSGLQEYNNRVFDRTPPHLERRRDSSPTLSANGQNKGYKIKTCGPSNNTSFSNENMHLRTSSVVSTNVFGQPRLRASLRDLRSPRKSHKSTLEEDLKKLILLDNPLPEQDKEMLHSSRKALQRTLSDESICSGRREAGLSSSQIAALDQALPNDVIFTSTYPSQTLPTRRLTQPPAAINLEKKSNMSASELSLTDVRDRIPVRRTDPGLMPLPDTESELEWSSLVNVAKAYEVQRAVSLFSLTDASIGSEVGPAYPVHMHNTLERQSSPRVPHILSDEPALALTGKVYQLEIQLKQLQDDLLKEKEDKIVLQAEVANLRVNNQRLQEESHSATEQLRKFAEIFSSTIEKK
SIO_010081: sipa1l3
subclass of: SO_0000673
so part of: sipa1l3
location: join(4198833..4200273,4203085..4203215,4204262..4204450,4205708..4205882,4206925..4207028,4212282..4212439,4214172..4214748,4216918..4217192,4232497..4232745,4235374..4235517,4249186..4249319,4252332..4252450,4254408..4254850,4277154..4277319,4278232..4278439,4279711..4279857,4285888..4286017,4293029..4293110,4296962..4297105)
location: region:4198833-4297105:1
so has part: feature:4198833-4200273:1:exon
so has part: feature:4203085-4203215:1:exon
so has part: feature:4204262-4204450:1:exon
so has part: feature:4205708-4205882:1:exon
so has part: feature:4206925-4207028:1:exon
so has part: feature:4212282-4212439:1:exon
so has part: feature:4214172-4214748:1:exon
so has part: feature:4216918-4217192:1:exon
so has part: feature:4232497-4232745:1:exon
so has part: feature:4235374-4235517:1:exon
so has part: feature:4249186-4249319:1:exon
so has part: feature:4252332-4252450:1:exon
so has part: feature:4254408-4254850:1:exon
so has part: feature:4277154-4277319:1:exon
so has part: feature:4278232-4278439:1:exon
so has part: feature:4279711-4279857:1:exon
so has part: feature:4285888-4286017:1:exon
so has part: feature:4293029-4293110:1:exon
so has part: feature:4296962-4297105:1:exon

XP_043536709.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4198833-4200273:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4203085-4203215:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4204262-4204450:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4205708-4205882:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4206925-4207028:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4212282-4212439:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4214172-4214748:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4216918-4217192:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4232497-4232745:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4235374-4235517:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4249186-4249319:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4252332-4252450:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4254408-4254850:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4277154-4277319:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4278232-4278439:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4279711-4279857:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4285888-4286017:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4293029-4293110:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4296962-4297105:1:exon

dpf1
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: dpf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4329611..4406611)
location: region:4329611-4406611:-1
so has part: feature:4329611-4406611:-1:exon
subclass of: SO_0000010

122542763
type: Gene
SIO_000068: ncbigene

position:4329611:-1
position: 4329611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4406611:-1
position: 4406611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4329611-4406611:-1:exon

dpf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: dpf1
product: D4, zinc and double PHD fingers family 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680775.1
SIO_010081: dpf1
subclass of: SO_0000673
so part of: dpf1
location: complement(join(4329611..4329889,4330421..4330502,4333529..4333641,4349046..4349174,4366930..4367061,4367588..4367666,4370536..4370625,4371522..4371649,4378879..4378986,4386980..4387140,4406314..4406611))
location: region:4329611-4406611:-1
so has part: feature:4406314-4406611:-1:exon
so has part: feature:4386980-4387140:-1:exon
so has part: feature:4378879-4378986:-1:exon
so has part: feature:4371522-4371649:-1:exon
so has part: feature:4370536-4370625:-1:exon
so has part: feature:4367588-4367666:-1:exon
so has part: feature:4366930-4367061:-1:exon
so has part: feature:4349046-4349174:-1:exon
so has part: feature:4333529-4333641:-1:exon
so has part: feature:4330421-4330502:-1:exon
so has part: feature:4329611-4329889:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4406314-4406611:-1:exon

position:4406314:-1
position: 4406314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4386980-4387140:-1:exon

position:4386980:-1
position: 4386980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4387140:-1
position: 4387140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4378879-4378986:-1:exon

position:4378879:-1
position: 4378879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4378986:-1
position: 4378986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4371522-4371649:-1:exon

position:4371522:-1
position: 4371522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4371649:-1
position: 4371649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4370536-4370625:-1:exon

position:4370536:-1
position: 4370536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4370625:-1
position: 4370625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4367588-4367666:-1:exon

position:4367588:-1
position: 4367588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4367666:-1
position: 4367666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4366930-4367061:-1:exon

position:4366930:-1
position: 4366930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4367061:-1
position: 4367061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4349046-4349174:-1:exon

position:4349046:-1
position: 4349046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4349174:-1
position: 4349174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4333529-4333641:-1:exon

position:4333529:-1
position: 4333529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4333641:-1
position: 4333641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4330421-4330502:-1:exon

position:4330421:-1
position: 4330421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4330502:-1
position: 4330502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4329611-4329889:-1:exon

position:4329889:-1
position: 4329889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

dpf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: dpf1
product: D4, zinc and double PHD fingers family 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680777.1
SIO_010081: dpf1
subclass of: SO_0000673
so part of: dpf1
location: complement(join(4329611..4329889,4330421..4330502,4333529..4333641,4366930..4367061,4367588..4367666,4370536..4370625,4371522..4371649,4378879..4378986,4386980..4387140,4406314..4406536))
location: region:4329611-4406536:-1
so has part: feature:4406314-4406536:-1:exon
so has part: feature:4386980-4387140:-1:exon
so has part: feature:4378879-4378986:-1:exon
so has part: feature:4371522-4371649:-1:exon
so has part: feature:4370536-4370625:-1:exon
so has part: feature:4367588-4367666:-1:exon
so has part: feature:4366930-4367061:-1:exon
so has part: feature:4333529-4333641:-1:exon
so has part: feature:4330421-4330502:-1:exon
so has part: feature:4329611-4329889:-1:exon

position:4406536:-1
position: 4406536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4406314-4406536:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4386980-4387140:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4378879-4378986:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4371522-4371649:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4370536-4370625:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4367588-4367666:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4366930-4367061:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4333529-4333641:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4330421-4330502:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4329611-4329889:-1:exon

dpf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: dpf1
product: D4, zinc and double PHD fingers family 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680776.1
SIO_010081: dpf1
subclass of: SO_0000673
so part of: dpf1
location: complement(join(4329611..4329889,4330421..4330502,4333529..4333641,4349046..4349174,4366930..4367061,4367588..4367666,4370536..4370625,4371522..4371649,4378879..4378986,4386980..4387140,4405998..4406039))
location: region:4329611-4406039:-1
so has part: feature:4405998-4406039:-1:exon
so has part: feature:4386980-4387140:-1:exon
so has part: feature:4378879-4378986:-1:exon
so has part: feature:4371522-4371649:-1:exon
so has part: feature:4370536-4370625:-1:exon
so has part: feature:4367588-4367666:-1:exon
so has part: feature:4366930-4367061:-1:exon
so has part: feature:4349046-4349174:-1:exon
so has part: feature:4333529-4333641:-1:exon
so has part: feature:4330421-4330502:-1:exon
so has part: feature:4329611-4329889:-1:exon

position:4406039:-1
position: 4406039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4405998-4406039:-1:exon

position:4405998:-1
position: 4405998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4386980-4387140:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4378879-4378986:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4371522-4371649:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4370536-4370625:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4367588-4367666:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4366930-4367061:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4349046-4349174:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4333529-4333641:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4330421-4330502:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4329611-4329889:-1:exon

dpf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: dpf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein neuro-d4 isoform X3
translation: MATVIQNPLKSLGEDFYREAIEHCRSYNARLCAERSMRLPFLDSQTGVAQNNCYIWMEKTHRGPGLAPGQLYTYPARCWRKKRRLNILEDPRLRPCEIKLDTEVALKKEGLLPEGPALEALLCADTAEKKAEPKDEESISECQRILASDFPHEIEADDLEEDTPKRKNKTKGRTCGIGGMRKRQEPTSLEDRDKPYVCDICGKRYKNRPGLSYHYTHTHLAEEEGEDELERHTLPFHRKNNHKRHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLNPPMSEPPEGSWSCHLCLQQLKEKASAYITLT
SIO_010081: dpf1
subclass of: SO_0000673
so part of: dpf1
location: complement(join(4329819..4329889,4330421..4330502,4333529..4333641,4366930..4367061,4367588..4367666,4370536..4370625,4371522..4371649,4378879..4378986,4386980..4387140,4406314..4406345))
location: region:4329819-4406345:-1
so has part: feature:4406314-4406345:-1:exon
so has part: feature:4386980-4387140:-1:exon
so has part: feature:4378879-4378986:-1:exon
so has part: feature:4371522-4371649:-1:exon
so has part: feature:4370536-4370625:-1:exon
so has part: feature:4367588-4367666:-1:exon
so has part: feature:4366930-4367061:-1:exon
so has part: feature:4333529-4333641:-1:exon
so has part: feature:4330421-4330502:-1:exon
so has part: feature:4329819-4329889:-1:exon

XP_043536712.1
type: Protein
SIO_000068: ncbiprotein

position:4329819:-1
position: 4329819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4406345:-1
position: 4406345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4406314-4406345:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4386980-4387140:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4378879-4378986:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4371522-4371649:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4370536-4370625:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4367588-4367666:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4366930-4367061:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4333529-4333641:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4330421-4330502:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4329819-4329889:-1:exon

dpf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: dpf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein neuro-d4 isoform X1
translation: MATVIQNPLKSLGEDFYREAIEHCRSYNARLCAERSMRLPFLDSQTGVAQNNCYIWMEKTHRGPGLAPGQLYTYPARCWRKKRRLNILEDPRLRPCEIKLDTEVALKKEGLLPEGPALEALLCADTAEKKAEPKDEESISECQRILASDFPHEIEADDLEEDTPKRKNKTKGRTCGIGGMRKRQEPTSLEDRDKPYVCDICGKRYKNRPGLSYHYTHTHLAEEEGEDELERHTLPFHRKNNHKPRKAPDGTIIPNTYCDFCLGGISANKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLNPPMSEPPEGSWSCHLCLQQLKEKASAYITLT
SIO_010081: dpf1
subclass of: SO_0000673
so part of: dpf1
location: complement(join(4329819..4329889,4330421..4330502,4333529..4333641,4349046..4349174,4366930..4367061,4367588..4367666,4370536..4370625,4371522..4371649,4378879..4378986,4386980..4387140,4406314..4406345))
location: region:4329819-4406345:-1
so has part: feature:4406314-4406345:-1:exon
so has part: feature:4386980-4387140:-1:exon
so has part: feature:4378879-4378986:-1:exon
so has part: feature:4371522-4371649:-1:exon
so has part: feature:4370536-4370625:-1:exon
so has part: feature:4367588-4367666:-1:exon
so has part: feature:4366930-4367061:-1:exon
so has part: feature:4349046-4349174:-1:exon
so has part: feature:4333529-4333641:-1:exon
so has part: feature:4330421-4330502:-1:exon
so has part: feature:4329819-4329889:-1:exon

XP_043536710.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4406314-4406345:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4386980-4387140:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4378879-4378986:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4371522-4371649:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4370536-4370625:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4367588-4367666:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4366930-4367061:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4349046-4349174:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4333529-4333641:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4330421-4330502:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4329819-4329889:-1:exon

dpf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: dpf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein neuro-d4 isoform X2
translation: MRLPFLDSQTGVAQNNCYIWMEKTHRGPGLAPGQLYTYPARCWRKKRRLNILEDPRLRPCEIKLDTEVALKKEGLLPEGPALEALLCADTAEKKAEPKDEESISECQRILASDFPHEIEADDLEEDTPKRKNKTKGRTCGIGGMRKRQEPTSLEDRDKPYVCDICGKRYKNRPGLSYHYTHTHLAEEEGEDELERHTLPFHRKNNHKPRKAPDGTIIPNTYCDFCLGGISANKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLNPPMSEPPEGSWSCHLCLQQLKEKASAYITLT
SIO_010081: dpf1
subclass of: SO_0000673
so part of: dpf1
location: complement(join(4329819..4329889,4330421..4330502,4333529..4333641,4349046..4349174,4366930..4367061,4367588..4367666,4370536..4370625,4371522..4371649,4378879..4378986,4386980..4387064))
location: region:4329819-4387064:-1
so has part: feature:4386980-4387064:-1:exon
so has part: feature:4378879-4378986:-1:exon
so has part: feature:4371522-4371649:-1:exon
so has part: feature:4370536-4370625:-1:exon
so has part: feature:4367588-4367666:-1:exon
so has part: feature:4366930-4367061:-1:exon
so has part: feature:4349046-4349174:-1:exon
so has part: feature:4333529-4333641:-1:exon
so has part: feature:4330421-4330502:-1:exon
so has part: feature:4329819-4329889:-1:exon

XP_043536711.1
type: Protein
SIO_000068: ncbiprotein

position:4387064:-1
position: 4387064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4386980-4387064:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4378879-4378986:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4371522-4371649:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4370536-4370625:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4367588-4367666:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4366930-4367061:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4349046-4349174:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4333529-4333641:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4330421-4330502:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4329819-4329889:-1:exon

dpf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: dpf1
product: D4, zinc and double PHD fingers family 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_043680778.1
SIO_010081: dpf1
subclass of: SO_0000673
so part of: dpf1
location: complement(join(4353441..4353638,4365084..4365095,4366930..4367061,4367588..4367666,4370536..4370625,4371522..4371649,4378879..4378986,4386980..4387140,4406314..4406493))
location: region:4353441-4406493:-1
so has part: feature:4406314-4406493:-1:exon
so has part: feature:4386980-4387140:-1:exon
so has part: feature:4378879-4378986:-1:exon
so has part: feature:4371522-4371649:-1:exon
so has part: feature:4370536-4370625:-1:exon
so has part: feature:4367588-4367666:-1:exon
so has part: feature:4366930-4367061:-1:exon
so has part: feature:4365084-4365095:-1:exon
so has part: feature:4353441-4353638:-1:exon

position:4353441:-1
position: 4353441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4406493:-1
position: 4406493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4406314-4406493:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4386980-4387140:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4378879-4378986:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4371522-4371649:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4370536-4370625:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4367588-4367666:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4366930-4367061:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4365084-4365095:-1:exon

position:4365084:-1
position: 4365084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4365095:-1
position: 4365095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4353441-4353638:-1:exon

position:4353638:-1
position: 4353638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

dpf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: dpf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein neuro-d4 isoform X4
translation: MATVIQNPLKSLGEDFYREAIEHCRSYNARLCAERSMRLPFLDSQTGVAQNNCYIWMEKTHRGPGLAPGQLYTYPARCWRKKRRLNILEDPRLRPCEIKLDTEVALKKEGLLPEGPALEALLCADTAEKKAEPKDEESISECQRILASDFPHEIEADDLEEDTPKRKNKTKGRTCGIGGMRKRQEPTSLEDRDKPYVCDICGKRYKNRPGLSYHYTHTHLAEEEGEDELERHTLPFHRKNNHKRIIQASRAGWMFEPDFVKNEMLIHESMGSQSALFNGIW
SIO_010081: dpf1
subclass of: SO_0000673
so part of: dpf1
location: complement(join(4353535..4353638,4365084..4365095,4366930..4367061,4367588..4367666,4370536..4370625,4371522..4371649,4378879..4378986,4386980..4387140,4406314..4406345))
location: region:4353535-4406345:-1
so has part: feature:4406314-4406345:-1:exon
so has part: feature:4386980-4387140:-1:exon
so has part: feature:4378879-4378986:-1:exon
so has part: feature:4371522-4371649:-1:exon
so has part: feature:4370536-4370625:-1:exon
so has part: feature:4367588-4367666:-1:exon
so has part: feature:4366930-4367061:-1:exon
so has part: feature:4365084-4365095:-1:exon
so has part: feature:4353535-4353638:-1:exon

XP_043536713.1
type: Protein
SIO_000068: ncbiprotein

position:4353535:-1
position: 4353535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4406314-4406345:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4386980-4387140:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4378879-4378986:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4371522-4371649:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4370536-4370625:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4367588-4367666:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4366930-4367061:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4365084-4365095:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4353535-4353638:-1:exon

si:ch211-11n16.2
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: si:ch211-11n16.2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4410014..4438566
location: region:4410014-4438566:1
so has part: feature:4410014-4438566:1:exon
subclass of: SO_0000010

122542685
type: Gene
SIO_000068: ncbigene

position:4410014:1
position: 4410014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4438566:1
position: 4438566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4410014-4438566:1:exon

si:ch211-11n16.2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: si:ch211-11n16.2
product: zinc finger FYVE domain-containing protein 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680663.1
SIO_010081: si:ch211-11n16.2
subclass of: SO_0000673
so part of: si:ch211-11n16.2
location: join(4410014..4410038,4411911..4411990,4416902..4417406,4418605..4418822,4420113..4420219,4422676..4422784,4423833..4423930,4425008..4425125,4430169..4430339,4433639..4433819,4435065..4435175,4436190..4438566)
location: region:4410014-4438566:1
so has part: feature:4410014-4410038:1:exon
so has part: feature:4411911-4411990:1:exon
so has part: feature:4416902-4417406:1:exon
so has part: feature:4418605-4418822:1:exon
so has part: feature:4420113-4420219:1:exon
so has part: feature:4422676-4422784:1:exon
so has part: feature:4423833-4423930:1:exon
so has part: feature:4425008-4425125:1:exon
so has part: feature:4430169-4430339:1:exon
so has part: feature:4433639-4433819:1:exon
so has part: feature:4435065-4435175:1:exon
so has part: feature:4436190-4438566:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4410014-4410038:1:exon

position:4410038:1
position: 4410038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4411911-4411990:1:exon

position:4411911:1
position: 4411911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4411990:1
position: 4411990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4416902-4417406:1:exon

position:4416902:1
position: 4416902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4417406:1
position: 4417406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4418605-4418822:1:exon

position:4418605:1
position: 4418605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4418822:1
position: 4418822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4420113-4420219:1:exon

position:4420113:1
position: 4420113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4420219:1
position: 4420219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4422676-4422784:1:exon

position:4422676:1
position: 4422676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4422784:1
position: 4422784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4423833-4423930:1:exon

position:4423833:1
position: 4423833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4423930:1
position: 4423930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4425008-4425125:1:exon

position:4425008:1
position: 4425008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4425125:1
position: 4425125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4430169-4430339:1:exon

position:4430169:1
position: 4430169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4430339:1
position: 4430339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4433639-4433819:1:exon

position:4433639:1
position: 4433639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4433819:1
position: 4433819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4435065-4435175:1:exon

position:4435065:1
position: 4435065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4435175:1
position: 4435175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4436190-4438566:1:exon

position:4436190:1
position: 4436190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

si:ch211-11n16.2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: si:ch211-11n16.2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger FYVE domain-containing protein 1
translation: MPQQDRATGTAAGSVSSLSAFFLSWWTSAKGKTFEVPDEESFVKKLGVPGDQAIKVLSIFGNTGDGKSHTLNAAFFGGREVFRTSDTQDSCTVGVWAACEPSLDLVLLDTEGLLGATSKQDRRRRLLLKVLAVSDLVVYRTRAERLHNDLFRFLGNASRAYLRHFSHELQAASQRLGLGLPMSSLGPALIVFQETSNTKLLGGDSQTPGSAEQLLQKRFHLLGLSTEAFNSVEYVGTQTTSPPTDFSGFLEAVRQRANSTLTRCRRSPAIVYNVLKALSIRFNGEITDSRIVVDCFFPDEYFSCSRVCLCCGAHCTNSMNHMKDNVPHQATGRCRYMHQYNNKVLICRVCYERGWEVTVNPKTSASTDSKWFGLATYAWSGYVLECPNCGVIYRSRQYWIGNQDPEASVVRPELKHVWQGADSFLRPNHNGAQQVLDSVSFVIQSVSEYSAGPSKAISSWLTDQVAPDYWRPNTQITECHQCKRPFEEGDRKHHCRACGEGCCDTCSSKSIPVPERGWGSAAVRVCDNCFRTGGKSTGKELGSAREGKGLLARRITEVAQSTLDTMTSAVEYPLGFVKEVARPDYWVPDHELVKCHRCAKPFSGMTAKHHCRACGLGICGQCSPELRTVPSRGWHHPVRVCLDCSEQKGEL
SIO_010081: si:ch211-11n16.2
subclass of: SO_0000673
so part of: si:ch211-11n16.2
location: join(4410014..4410038,4411911..4411990,4416902..4417406,4418605..4418822,4420113..4420219,4422676..4422784,4423833..4423930,4425008..4425125,4430169..4430339,4433639..4433819,4435065..4435175,4436190..4436422)
location: region:4410014-4436422:1
so has part: feature:4410014-4410038:1:exon
so has part: feature:4411911-4411990:1:exon
so has part: feature:4416902-4417406:1:exon
so has part: feature:4418605-4418822:1:exon
so has part: feature:4420113-4420219:1:exon
so has part: feature:4422676-4422784:1:exon
so has part: feature:4423833-4423930:1:exon
so has part: feature:4425008-4425125:1:exon
so has part: feature:4430169-4430339:1:exon
so has part: feature:4433639-4433819:1:exon
so has part: feature:4435065-4435175:1:exon
so has part: feature:4436190-4436422:1:exon

XP_043536598.1
type: Protein
SIO_000068: ncbiprotein

position:4436422:1
position: 4436422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4410014-4410038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4411911-4411990:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4416902-4417406:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4418605-4418822:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4420113-4420219:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4422676-4422784:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4423833-4423930:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4425008-4425125:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4430169-4430339:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4433639-4433819:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4435065-4435175:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4436190-4436422:1:exon

LOC122542765
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: LOC122542765
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4464185..4584368)
location: region:4464185-4584368:-1
so has part: feature:4464185-4584368:-1:exon
subclass of: SO_0000010

122542765
type: Gene
SIO_000068: ncbigene

position:4464185:-1
position: 4464185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4584368:-1
position: 4584368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4464185-4584368:-1:exon

LOC122542765
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542765
product: numb-like protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_043680779.1
SIO_010081: LOC122542765
subclass of: SO_0000673
so part of: LOC122542765
location: complement(join(4464185..4465304,4472244..4472448,4473584..4473724,4476724..4476798,4485435..4485509,4487290..4487431,4583904..4584368))
location: region:4464185-4584368:-1
so has part: feature:4583904-4584368:-1:exon
so has part: feature:4487290-4487431:-1:exon
so has part: feature:4485435-4485509:-1:exon
so has part: feature:4476724-4476798:-1:exon
so has part: feature:4473584-4473724:-1:exon
so has part: feature:4472244-4472448:-1:exon
so has part: feature:4464185-4465304:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4583904-4584368:-1:exon

position:4583904:-1
position: 4583904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4487290-4487431:-1:exon

position:4487290:-1
position: 4487290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4487431:-1
position: 4487431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4485435-4485509:-1:exon

position:4485435:-1
position: 4485435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4485509:-1
position: 4485509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4476724-4476798:-1:exon

position:4476724:-1
position: 4476724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4476798:-1
position: 4476798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4473584-4473724:-1:exon

position:4473584:-1
position: 4473584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4473724:-1
position: 4473724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4472244-4472448:-1:exon

position:4472244:-1
position: 4472244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4472448:-1
position: 4472448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4464185-4465304:-1:exon

position:4465304:-1
position: 4465304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC122542765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542765
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: numb-like protein
translation: MNKLRQSLRRKKQPYVPEASRPHQWQADEEAVRKGKCSFPVRYLGHVEVEESRGMHVCEDAVQKLKATGKKSVKAMLWVSADGLRVVDDKTKDLIVDQTIEKVSFCAPDRNYDKAFSYICRDGTTRRWICHCFMALKDSGERLSHAVGCAFAACLERKQRREKECGVTASFDASRTSFTREGSFRVTTTSQHAEREDTMKQLQDKTKGGGWGDVSTVTAGNSTFQPGHRRTPSEAERWLQEVAKTARAQQQQQQQQPPSAPLAPTAIPVPTGLPASASPFIGTAAPVSLFGPPPAFVTYAPGLTNGTPSPYPAPSVPVVGITPSQMVANVFGSAQQAPLSNQGFSGRAAPFMPAFGITASSTGATVAQHQARPPRPLGGASVPSRSGVTIGPGAWPPEPSGQEADQFEAQWAALEAKSQARLGAALPTNPFSTDLQKTFEIQL
SIO_010081: LOC122542765
subclass of: SO_0000673
so part of: LOC122542765
location: complement(join(4464595..4465304,4472244..4472448,4473584..4473724,4476724..4476798,4485435..4485509,4487290..4487415))
location: region:4464595-4487415:-1
so has part: feature:4487290-4487415:-1:exon
so has part: feature:4485435-4485509:-1:exon
so has part: feature:4476724-4476798:-1:exon
so has part: feature:4473584-4473724:-1:exon
so has part: feature:4472244-4472448:-1:exon
so has part: feature:4464595-4465304:-1:exon

XP_043536714.1
type: Protein
SIO_000068: ncbiprotein

position:4464595:-1
position: 4464595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4487415:-1
position: 4487415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4487290-4487415:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4485435-4485509:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4476724-4476798:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4473584-4473724:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4472244-4472448:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4464595-4465304:-1:exon

coq8b
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: coq8b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4643148..4667455)
location: region:4643148-4667455:-1
so has part: feature:4643148-4667455:-1:exon
subclass of: SO_0000010

122542766
type: Gene
SIO_000068: ncbigene

position:4643148:-1
position: 4643148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4667455:-1
position: 4667455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4643148-4667455:-1:exon

coq8b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: coq8b
product: coenzyme Q8B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_043680781.1
SIO_010081: coq8b
subclass of: SO_0000673
so part of: coq8b
location: complement(join(4643148..4644247,4646145..4646231,4648254..4648319,4649706..4649813,4650060..4650201,4656800..4656893,4657717..4657798,4658832..4658972,4660048..4660133,4663680..4663802,4665887..4665964,4666184..4666250,4667000..4667455))
location: region:4643148-4667455:-1
so has part: feature:4667000-4667455:-1:exon
so has part: feature:4666184-4666250:-1:exon
so has part: feature:4665887-4665964:-1:exon
so has part: feature:4663680-4663802:-1:exon
so has part: feature:4660048-4660133:-1:exon
so has part: feature:4658832-4658972:-1:exon
so has part: feature:4657717-4657798:-1:exon
so has part: feature:4656800-4656893:-1:exon
so has part: feature:4650060-4650201:-1:exon
so has part: feature:4649706-4649813:-1:exon
so has part: feature:4648254-4648319:-1:exon
so has part: feature:4646145-4646231:-1:exon
so has part: feature:4643148-4644247:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4667000-4667455:-1:exon

position:4667000:-1
position: 4667000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4666184-4666250:-1:exon

position:4666184:-1
position: 4666184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4666250:-1
position: 4666250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4665887-4665964:-1:exon

position:4665887:-1
position: 4665887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4665964:-1
position: 4665964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4663680-4663802:-1:exon

position:4663680:-1
position: 4663680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4663802:-1
position: 4663802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4660048-4660133:-1:exon

position:4660048:-1
position: 4660048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4660133:-1
position: 4660133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4658832-4658972:-1:exon

position:4658832:-1
position: 4658832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4658972:-1
position: 4658972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4657717-4657798:-1:exon

position:4657717:-1
position: 4657717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4657798:-1
position: 4657798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4656800-4656893:-1:exon

position:4656800:-1
position: 4656800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4656893:-1
position: 4656893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4650060-4650201:-1:exon

position:4650060:-1
position: 4650060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4650201:-1
position: 4650201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4649706-4649813:-1:exon

position:4649706:-1
position: 4649706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4649813:-1
position: 4649813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4648254-4648319:-1:exon

position:4648254:-1
position: 4648254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4648319:-1
position: 4648319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4646145-4646231:-1:exon

position:4646145:-1
position: 4646145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4646231:-1
position: 4646231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4643148-4644247:-1:exon

position:4644247:-1
position: 4644247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

coq8b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: coq8b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: atypical kinase COQ8B, mitochondrial
translation: MEDGYPMCFFFALVFQRGVRAFKERPPFDGENEASRWNLASEMAPEYSGSTMGRGSQETADARSAESSSLSTEGGGQPNPVRPTTSGFGGGSGRAPLFTPTGPGLGLTRGFHDEASVRGLTPEDIAKARNTKPSRVKCSQSKGPRQTISERARERTVPSSRISRLANFGGLAVGLGIGALAEVAKKSLTGNQTSKDHKGLLDSNPFLSEANAERIVDTLCKVRGAALKIGQMLSIQDSSFINPQLQKIFERVRQSADFMPAWQTVKVLDEELGPHWREKLAEFEEKPFAAASIGQVHHGELQDGREVAIKIQYPGIARSIKSDVENLLSLLKMSISLPEGLFAESGIVVLKRELEWECDYIREAACAKKFRELLKGDPFFSVPEVIDELTTKRILTAELVTGVPLDKCDSLDQNIRNKICSNILELCLREVFEFRFMQTDPNWSNFFFDEEKQKVTLLDFGASREFGKEFTDNYIEVVRAAADGDRDKVLQKSRDLKFLTGYETKMFEDAHVDAVMTLGEAFAQPESFDFGSQDTTRRIQSLIPVMLKHRLTPPPEESYSLHRKMAGSFLICSRLQAIIPCKEMFDQIYARYFNQDHQELFKMQQRK
SIO_010081: coq8b
subclass of: SO_0000673
so part of: coq8b
location: complement(join(4643939..4644247,4646145..4646231,4648254..4648319,4649706..4649813,4650060..4650201,4656800..4656893,4657717..4657798,4658832..4658972,4660048..4660133,4663680..4663802,4665887..4665964,4666184..4666250,4667000..4667440))
location: region:4643939-4667440:-1
so has part: feature:4667000-4667440:-1:exon
so has part: feature:4666184-4666250:-1:exon
so has part: feature:4665887-4665964:-1:exon
so has part: feature:4663680-4663802:-1:exon
so has part: feature:4660048-4660133:-1:exon
so has part: feature:4658832-4658972:-1:exon
so has part: feature:4657717-4657798:-1:exon
so has part: feature:4656800-4656893:-1:exon
so has part: feature:4650060-4650201:-1:exon
so has part: feature:4649706-4649813:-1:exon
so has part: feature:4648254-4648319:-1:exon
so has part: feature:4646145-4646231:-1:exon
so has part: feature:4643939-4644247:-1:exon

XP_043536716.1
type: Protein
SIO_000068: ncbiprotein

position:4643939:-1
position: 4643939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4667440:-1
position: 4667440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4667000-4667440:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4666184-4666250:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4665887-4665964:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4663680-4663802:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4660048-4660133:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4658832-4658972:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4657717-4657798:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4656800-4656893:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4650060-4650201:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4649706-4649813:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4648254-4648319:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4646145-4646231:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4643939-4644247:-1:exon

LOC122542957
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: LOC122542957
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 4644479..4644577
location: region:4644479-4644577:1
so has part: feature:4644479-4644577:1:exon

122542957
type: Gene
SIO_000068: ncbigene

position:4644479:1
position: 4644479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4644577:1
position: 4644577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4644479-4644577:1:exon

LOC122542957
type: Exon
subclass of: SO_0000147
RO_0002162: 36176
gene: LOC122542957
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC122542957
subclass of: SO_0000673
so part of: LOC122542957
location: 4644479..4644577
location: region:4644479-4644577:1
so has part: feature:4644479-4644577:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4644479-4644577:1:exon

LOC122542767
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: LOC122542767
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4701973..4744210)
location: region:4701973-4744210:-1
so has part: feature:4701973-4744210:-1:exon
subclass of: SO_0000010

122542767
type: Gene
SIO_000068: ncbigene

position:4701973:-1
position: 4701973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4744210:-1
position: 4744210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4701973-4744210:-1:exon

LOC122542767
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542767
product: homeobox protein otx5-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_043680782.1
SIO_010081: LOC122542767
subclass of: SO_0000673
so part of: LOC122542767
location: complement(join(4701973..4703672,4711637..4711788,4730252..4730434,4738171..4738250,4743904..4744210))
location: region:4701973-4744210:-1
so has part: feature:4743904-4744210:-1:exon
so has part: feature:4738171-4738250:-1:exon
so has part: feature:4730252-4730434:-1:exon
so has part: feature:4711637-4711788:-1:exon
so has part: feature:4701973-4703672:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4743904-4744210:-1:exon

position:4743904:-1
position: 4743904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4738171-4738250:-1:exon

position:4738171:-1
position: 4738171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4738250:-1
position: 4738250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4730252-4730434:-1:exon

position:4730252:-1
position: 4730252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4730434:-1
position: 4730434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4711637-4711788:-1:exon

position:4711637:-1
position: 4711637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4711788:-1
position: 4711788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4701973-4703672:-1:exon

position:4703672:-1
position: 4703672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC122542767
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542767
product: homeobox protein otx5-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_043680785.1
SIO_010081: LOC122542767
subclass of: SO_0000673
so part of: LOC122542767
location: complement(join(4701973..4703672,4711637..4711788,4730252..4730434,4738171..4738250,4742720..4743768))
location: region:4701973-4743768:-1
so has part: feature:4742720-4743768:-1:exon
so has part: feature:4738171-4738250:-1:exon
so has part: feature:4730252-4730434:-1:exon
so has part: feature:4711637-4711788:-1:exon
so has part: feature:4701973-4703672:-1:exon

position:4743768:-1
position: 4743768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4742720-4743768:-1:exon

position:4742720:-1
position: 4742720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4738171-4738250:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4730252-4730434:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4711637-4711788:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4701973-4703672:-1:exon

LOC122542767
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542767
product: homeobox protein otx5-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_043680784.1
SIO_010081: LOC122542767
subclass of: SO_0000673
so part of: LOC122542767
location: complement(join(4701973..4703672,4711637..4711788,4730252..4730434,4738171..4738250,4741567..4741838))
location: region:4701973-4741838:-1
so has part: feature:4741567-4741838:-1:exon
so has part: feature:4738171-4738250:-1:exon
so has part: feature:4730252-4730434:-1:exon
so has part: feature:4711637-4711788:-1:exon
so has part: feature:4701973-4703672:-1:exon

position:4741838:-1
position: 4741838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4741567-4741838:-1:exon

position:4741567:-1
position: 4741567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4738171-4738250:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4730252-4730434:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4711637-4711788:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4701973-4703672:-1:exon

LOC122542767
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542767
product: homeobox protein otx5-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_043680786.1
SIO_010081: LOC122542767
subclass of: SO_0000673
so part of: LOC122542767
location: complement(join(4701973..4703672,4711637..4711788,4730252..4730434,4738171..4738250,4738588..4738608))
location: region:4701973-4738608:-1
so has part: feature:4738588-4738608:-1:exon
so has part: feature:4738171-4738250:-1:exon
so has part: feature:4730252-4730434:-1:exon
so has part: feature:4711637-4711788:-1:exon
so has part: feature:4701973-4703672:-1:exon

position:4738608:-1
position: 4738608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4738588-4738608:-1:exon

position:4738588:-1
position: 4738588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4738171-4738250:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4730252-4730434:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4711637-4711788:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4701973-4703672:-1:exon

LOC122542767
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542767
product: homeobox protein otx5-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_043680783.1
SIO_010081: LOC122542767
subclass of: SO_0000673
so part of: LOC122542767
location: complement(join(4701973..4703672,4711637..4711788,4730252..4730434,4738171..4738250,4738349..4738439))
location: region:4701973-4738439:-1
so has part: feature:4738349-4738439:-1:exon
so has part: feature:4738171-4738250:-1:exon
so has part: feature:4730252-4730434:-1:exon
so has part: feature:4711637-4711788:-1:exon
so has part: feature:4701973-4703672:-1:exon

position:4738439:-1
position: 4738439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4738349-4738439:-1:exon

position:4738349:-1
position: 4738349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4738171-4738250:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4730252-4730434:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4711637-4711788:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4701973-4703672:-1:exon

LOC122542767
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542767
product: homeobox protein otx5-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_043680787.1
SIO_010081: LOC122542767
subclass of: SO_0000673
so part of: LOC122542767
location: complement(join(4701973..4703672,4711637..4711788,4730252..4730434,4738171..4738250,4738412..4738430))
location: region:4701973-4738430:-1
so has part: feature:4738412-4738430:-1:exon
so has part: feature:4738171-4738250:-1:exon
so has part: feature:4730252-4730434:-1:exon
so has part: feature:4711637-4711788:-1:exon
so has part: feature:4701973-4703672:-1:exon

position:4738430:-1
position: 4738430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4738412-4738430:-1:exon

position:4738412:-1
position: 4738412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4738171-4738250:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4730252-4730434:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4711637-4711788:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4701973-4703672:-1:exon

LOC122542767
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542767
product: homeobox protein otx5-like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_043680788.1
SIO_010081: LOC122542767
subclass of: SO_0000673
so part of: LOC122542767
location: complement(join(4701973..4703672,4711637..4711788,4730252..4730434,4734122..4734205))
location: region:4701973-4734205:-1
so has part: feature:4734122-4734205:-1:exon
so has part: feature:4730252-4730434:-1:exon
so has part: feature:4711637-4711788:-1:exon
so has part: feature:4701973-4703672:-1:exon

position:4734205:-1
position: 4734205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4734122-4734205:-1:exon

position:4734122:-1
position: 4734122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4730252-4730434:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4711637-4711788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4701973-4703672:-1:exon

LOC122542767
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542767
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein otx5-like
translation: MMSYMKQPHYAVNGLTLTAPGMDLLHSAVGYQTTPRKQRRERTTFTRAQLDILEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQSSGQAKTRPAKKKTSPSRDTSSETNGNGHYSPNPPGTVGTASSISNASVSIWSPASISPIPDPLSSSTASCMQRSAAYPMTYSQAQGYNQSYAGSSPYFSGLDCGPYLSPMHPQLSAPGSALSPLGTPAMGGPLSQSPASLSAQGYGSASLGFNTVECLDYKDQTSSWKLNFGPTDCLDYKDQTSWKFQVL
SIO_010081: LOC122542767
subclass of: SO_0000673
so part of: LOC122542767
location: complement(join(4703049..4703672,4711637..4711788,4730252..4730348))
location: region:4703049-4730348:-1
so has part: feature:4730252-4730348:-1:exon
so has part: feature:4711637-4711788:-1:exon
so has part: feature:4703049-4703672:-1:exon

XP_043536717.1
type: Protein
SIO_000068: ncbiprotein

position:4703049:-1
position: 4703049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4730348:-1
position: 4730348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4730252-4730348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4711637-4711788:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4703049-4703672:-1:exon

LOC122542767
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542767
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein otx5-like
translation: MMSYMKQPHYAVNGLTLTAPGMDLLHSAVGYQTTPRKQRRERTTFTRAQLDILEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQSSGQAKTRPAKKKTSPSRDTSSETNGNGHYSPNPPGTVGTASSISNASVSIWSPASISPIPDPLSSSTASCMQRSAAYPMTYSQAQGYNQSYAGSSPYFSGLDCGPYLSPMHPQLSAPGSALSPLGTPAMGGPLSQSPASLSAQGYGSASLGFNTVECLDYKDQTSSWKLNFGPTDCLDYKDQTSWKFQVL
SIO_010081: LOC122542767
subclass of: SO_0000673
so part of: LOC122542767
location: complement(join(4703049..4703672,4711637..4711788,4730252..4730348))
location: region:4703049-4730348:-1
so has part: feature:4730252-4730348:-1:exon
so has part: feature:4711637-4711788:-1:exon
so has part: feature:4703049-4703672:-1:exon

XP_043536718.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4730252-4730348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4711637-4711788:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4703049-4703672:-1:exon

LOC122542767
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542767
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein otx5-like
translation: MMSYMKQPHYAVNGLTLTAPGMDLLHSAVGYQTTPRKQRRERTTFTRAQLDILEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQSSGQAKTRPAKKKTSPSRDTSSETNGNGHYSPNPPGTVGTASSISNASVSIWSPASISPIPDPLSSSTASCMQRSAAYPMTYSQAQGYNQSYAGSSPYFSGLDCGPYLSPMHPQLSAPGSALSPLGTPAMGGPLSQSPASLSAQGYGSASLGFNTVECLDYKDQTSSWKLNFGPTDCLDYKDQTSWKFQVL
SIO_010081: LOC122542767
subclass of: SO_0000673
so part of: LOC122542767
location: complement(join(4703049..4703672,4711637..4711788,4730252..4730348))
location: region:4703049-4730348:-1
so has part: feature:4730252-4730348:-1:exon
so has part: feature:4711637-4711788:-1:exon
so has part: feature:4703049-4703672:-1:exon

XP_043536719.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4730252-4730348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4711637-4711788:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4703049-4703672:-1:exon

LOC122542767
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542767
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein otx5-like
translation: MMSYMKQPHYAVNGLTLTAPGMDLLHSAVGYQTTPRKQRRERTTFTRAQLDILEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQSSGQAKTRPAKKKTSPSRDTSSETNGNGHYSPNPPGTVGTASSISNASVSIWSPASISPIPDPLSSSTASCMQRSAAYPMTYSQAQGYNQSYAGSSPYFSGLDCGPYLSPMHPQLSAPGSALSPLGTPAMGGPLSQSPASLSAQGYGSASLGFNTVECLDYKDQTSSWKLNFGPTDCLDYKDQTSWKFQVL
SIO_010081: LOC122542767
subclass of: SO_0000673
so part of: LOC122542767
location: complement(join(4703049..4703672,4711637..4711788,4730252..4730348))
location: region:4703049-4730348:-1
so has part: feature:4730252-4730348:-1:exon
so has part: feature:4711637-4711788:-1:exon
so has part: feature:4703049-4703672:-1:exon

XP_043536720.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4730252-4730348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4711637-4711788:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4703049-4703672:-1:exon

LOC122542767
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542767
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein otx5-like
translation: MMSYMKQPHYAVNGLTLTAPGMDLLHSAVGYQTTPRKQRRERTTFTRAQLDILEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQSSGQAKTRPAKKKTSPSRDTSSETNGNGHYSPNPPGTVGTASSISNASVSIWSPASISPIPDPLSSSTASCMQRSAAYPMTYSQAQGYNQSYAGSSPYFSGLDCGPYLSPMHPQLSAPGSALSPLGTPAMGGPLSQSPASLSAQGYGSASLGFNTVECLDYKDQTSSWKLNFGPTDCLDYKDQTSWKFQVL
SIO_010081: LOC122542767
subclass of: SO_0000673
so part of: LOC122542767
location: complement(join(4703049..4703672,4711637..4711788,4730252..4730348))
location: region:4703049-4730348:-1
so has part: feature:4730252-4730348:-1:exon
so has part: feature:4711637-4711788:-1:exon
so has part: feature:4703049-4703672:-1:exon

XP_043536721.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4730252-4730348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4711637-4711788:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4703049-4703672:-1:exon

LOC122542767
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542767
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein otx5-like
translation: MMSYMKQPHYAVNGLTLTAPGMDLLHSAVGYQTTPRKQRRERTTFTRAQLDILEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQSSGQAKTRPAKKKTSPSRDTSSETNGNGHYSPNPPGTVGTASSISNASVSIWSPASISPIPDPLSSSTASCMQRSAAYPMTYSQAQGYNQSYAGSSPYFSGLDCGPYLSPMHPQLSAPGSALSPLGTPAMGGPLSQSPASLSAQGYGSASLGFNTVECLDYKDQTSSWKLNFGPTDCLDYKDQTSWKFQVL
SIO_010081: LOC122542767
subclass of: SO_0000673
so part of: LOC122542767
location: complement(join(4703049..4703672,4711637..4711788,4730252..4730348))
location: region:4703049-4730348:-1
so has part: feature:4730252-4730348:-1:exon
so has part: feature:4711637-4711788:-1:exon
so has part: feature:4703049-4703672:-1:exon

XP_043536722.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4730252-4730348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4711637-4711788:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4703049-4703672:-1:exon

LOC122542767
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542767
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein otx5-like
translation: MMSYMKQPHYAVNGLTLTAPGMDLLHSAVGYQTTPRKQRRERTTFTRAQLDILEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQSSGQAKTRPAKKKTSPSRDTSSETNGNGHYSPNPPGTVGTASSISNASVSIWSPASISPIPDPLSSSTASCMQRSAAYPMTYSQAQGYNQSYAGSSPYFSGLDCGPYLSPMHPQLSAPGSALSPLGTPAMGGPLSQSPASLSAQGYGSASLGFNTVECLDYKDQTSSWKLNFGPTDCLDYKDQTSWKFQVL
SIO_010081: LOC122542767
subclass of: SO_0000673
so part of: LOC122542767
location: complement(join(4703049..4703672,4711637..4711788,4730252..4730348))
location: region:4703049-4730348:-1
so has part: feature:4730252-4730348:-1:exon
so has part: feature:4711637-4711788:-1:exon
so has part: feature:4703049-4703672:-1:exon

XP_043536723.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4730252-4730348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4711637-4711788:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4703049-4703672:-1:exon

h3f3c
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: h3f3c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4814507..4824786)
location: region:4814507-4824786:-1
so has part: feature:4814507-4824786:-1:exon
subclass of: SO_0000010

122542768
type: Gene
SIO_000068: ncbigene

position:4814507:-1
position: 4814507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4824786:-1
position: 4824786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4814507-4824786:-1:exon

h3f3c
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: h3f3c
product: H3 histone, family 3C
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680789.1
SIO_010081: h3f3c
subclass of: SO_0000673
so part of: h3f3c
location: complement(join(4814507..4815028,4816428..4816581,4819356..4819508,4824653..4824786))
location: region:4814507-4824786:-1
so has part: feature:4824653-4824786:-1:exon
so has part: feature:4819356-4819508:-1:exon
so has part: feature:4816428-4816581:-1:exon
so has part: feature:4814507-4815028:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4824653-4824786:-1:exon

position:4824653:-1
position: 4824653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4819356-4819508:-1:exon

position:4819356:-1
position: 4819356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4819508:-1
position: 4819508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4816428-4816581:-1:exon

position:4816428:-1
position: 4816428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4816581:-1
position: 4816581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4814507-4815028:-1:exon

position:4815028:-1
position: 4815028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

h3f3c
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: h3f3c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: H3 histone, family 3C
translation: MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
SIO_010081: h3f3c
subclass of: SO_0000673
so part of: h3f3c
location: complement(join(4814900..4815028,4816428..4816581,4819356..4819483))
location: region:4814900-4819483:-1
so has part: feature:4819356-4819483:-1:exon
so has part: feature:4816428-4816581:-1:exon
so has part: feature:4814900-4815028:-1:exon

XP_043536724.1
type: Protein
SIO_000068: ncbiprotein

position:4814900:-1
position: 4814900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4819483:-1
position: 4819483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4819356-4819483:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4816428-4816581:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4814900-4815028:-1:exon

sirt2
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: sirt2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4838880..4884831)
location: region:4838880-4884831:-1
so has part: feature:4838880-4884831:-1:exon
subclass of: SO_0000010

122542769
type: Gene
SIO_000068: ncbigene

position:4838880:-1
position: 4838880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4884831:-1
position: 4884831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4838880-4884831:-1:exon

sirt2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: sirt2
product: sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae), transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_043680796.1
SIO_010081: sirt2
subclass of: SO_0000673
so part of: sirt2
location: complement(join(4838880..4839004,4844055..4844131,4847329..4847384,4848304..4848363,4851671..4851800,4853485..4853553,4854935..4854991,4856559..4856665,4857557..4857598,4860236..4860352,4862110..4862158,4864056..4864093,4884737..4884831))
location: region:4838880-4884831:-1
so has part: feature:4884737-4884831:-1:exon
so has part: feature:4864056-4864093:-1:exon
so has part: feature:4862110-4862158:-1:exon
so has part: feature:4860236-4860352:-1:exon
so has part: feature:4857557-4857598:-1:exon
so has part: feature:4856559-4856665:-1:exon
so has part: feature:4854935-4854991:-1:exon
so has part: feature:4853485-4853553:-1:exon
so has part: feature:4851671-4851800:-1:exon
so has part: feature:4848304-4848363:-1:exon
so has part: feature:4847329-4847384:-1:exon
so has part: feature:4844055-4844131:-1:exon
so has part: feature:4838880-4839004:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4884737-4884831:-1:exon

position:4884737:-1
position: 4884737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4864056-4864093:-1:exon

position:4864056:-1
position: 4864056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4864093:-1
position: 4864093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4862110-4862158:-1:exon

position:4862110:-1
position: 4862110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4862158:-1
position: 4862158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4860236-4860352:-1:exon

position:4860236:-1
position: 4860236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4860352:-1
position: 4860352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4857557-4857598:-1:exon

position:4857557:-1
position: 4857557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4857598:-1
position: 4857598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4856559-4856665:-1:exon

position:4856559:-1
position: 4856559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4856665:-1
position: 4856665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4854935-4854991:-1:exon

position:4854935:-1
position: 4854935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4854991:-1
position: 4854991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4853485-4853553:-1:exon

position:4853485:-1
position: 4853485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4853553:-1
position: 4853553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4851671-4851800:-1:exon

position:4851671:-1
position: 4851671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4851800:-1
position: 4851800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4848304-4848363:-1:exon

position:4848304:-1
position: 4848304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4848363:-1
position: 4848363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4847329-4847384:-1:exon

position:4847329:-1
position: 4847329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4847384:-1
position: 4847384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4844055-4844131:-1:exon

position:4844055:-1
position: 4844055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4844131:-1
position: 4844131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4838880-4839004:-1:exon

position:4839004:-1
position: 4839004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

sirt2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: sirt2
product: sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae), transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_043680794.1
SIO_010081: sirt2
subclass of: SO_0000673
so part of: sirt2
location: complement(join(4838880..4839004,4844055..4844131,4847329..4847384,4848304..4848363,4851671..4851800,4853485..4853553,4854935..4854991,4856559..4856665,4857557..4857598,4860236..4860352,4862110..4862158,4864056..4864093,4871759..4871923))
location: region:4838880-4871923:-1
so has part: feature:4871759-4871923:-1:exon
so has part: feature:4864056-4864093:-1:exon
so has part: feature:4862110-4862158:-1:exon
so has part: feature:4860236-4860352:-1:exon
so has part: feature:4857557-4857598:-1:exon
so has part: feature:4856559-4856665:-1:exon
so has part: feature:4854935-4854991:-1:exon
so has part: feature:4853485-4853553:-1:exon
so has part: feature:4851671-4851800:-1:exon
so has part: feature:4848304-4848363:-1:exon
so has part: feature:4847329-4847384:-1:exon
so has part: feature:4844055-4844131:-1:exon
so has part: feature:4838880-4839004:-1:exon

position:4871923:-1
position: 4871923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4871759-4871923:-1:exon

position:4871759:-1
position: 4871759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4864056-4864093:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4862110-4862158:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4860236-4860352:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4857557-4857598:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4856559-4856665:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4854935-4854991:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4853485-4853553:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4851671-4851800:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4848304-4848363:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4847329-4847384:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4844055-4844131:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4838880-4839004:-1:exon

sirt2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: sirt2
product: sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae), transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_043680795.1
SIO_010081: sirt2
subclass of: SO_0000673
so part of: sirt2
location: complement(join(4838880..4839004,4844055..4844131,4847329..4847384,4848304..4848363,4851671..4851800,4853485..4853553,4854935..4854991,4856559..4856665,4857557..4857598,4860236..4860352,4862110..4862158,4864056..4864093,4869904..4870032))
location: region:4838880-4870032:-1
so has part: feature:4869904-4870032:-1:exon
so has part: feature:4864056-4864093:-1:exon
so has part: feature:4862110-4862158:-1:exon
so has part: feature:4860236-4860352:-1:exon
so has part: feature:4857557-4857598:-1:exon
so has part: feature:4856559-4856665:-1:exon
so has part: feature:4854935-4854991:-1:exon
so has part: feature:4853485-4853553:-1:exon
so has part: feature:4851671-4851800:-1:exon
so has part: feature:4848304-4848363:-1:exon
so has part: feature:4847329-4847384:-1:exon
so has part: feature:4844055-4844131:-1:exon
so has part: feature:4838880-4839004:-1:exon

position:4870032:-1
position: 4870032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4869904-4870032:-1:exon

position:4869904:-1
position: 4869904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4864056-4864093:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4862110-4862158:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4860236-4860352:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4857557-4857598:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4856559-4856665:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4854935-4854991:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4853485-4853553:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4851671-4851800:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4848304-4848363:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4847329-4847384:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4844055-4844131:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4838880-4839004:-1:exon

sirt2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: sirt2
product: sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae), transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_043680793.1
SIO_010081: sirt2
subclass of: SO_0000673
so part of: sirt2
location: complement(join(4838880..4839004,4844055..4844131,4847329..4847384,4848304..4848363,4851671..4851800,4853485..4853553,4854935..4854991,4856559..4856665,4857557..4857598,4860236..4860352,4862110..4862158,4864056..4864093,4868088..4868156))
location: region:4838880-4868156:-1
so has part: feature:4868088-4868156:-1:exon
so has part: feature:4864056-4864093:-1:exon
so has part: feature:4862110-4862158:-1:exon
so has part: feature:4860236-4860352:-1:exon
so has part: feature:4857557-4857598:-1:exon
so has part: feature:4856559-4856665:-1:exon
so has part: feature:4854935-4854991:-1:exon
so has part: feature:4853485-4853553:-1:exon
so has part: feature:4851671-4851800:-1:exon
so has part: feature:4848304-4848363:-1:exon
so has part: feature:4847329-4847384:-1:exon
so has part: feature:4844055-4844131:-1:exon
so has part: feature:4838880-4839004:-1:exon

position:4868156:-1
position: 4868156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4868088-4868156:-1:exon

position:4868088:-1
position: 4868088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4864056-4864093:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4862110-4862158:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4860236-4860352:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4857557-4857598:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4856559-4856665:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4854935-4854991:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4853485-4853553:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4851671-4851800:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4848304-4848363:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4847329-4847384:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4844055-4844131:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4838880-4839004:-1:exon

sirt2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: sirt2
product: sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae), transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_043680792.1
SIO_010081: sirt2
subclass of: SO_0000673
so part of: sirt2
location: complement(join(4838880..4839004,4844055..4844131,4847329..4847384,4848304..4848363,4851671..4851800,4853485..4853553,4854935..4854991,4856559..4856665,4857557..4857598,4860236..4860352,4862110..4862158,4864056..4864093,4866975..4867075))
location: region:4838880-4867075:-1
so has part: feature:4866975-4867075:-1:exon
so has part: feature:4864056-4864093:-1:exon
so has part: feature:4862110-4862158:-1:exon
so has part: feature:4860236-4860352:-1:exon
so has part: feature:4857557-4857598:-1:exon
so has part: feature:4856559-4856665:-1:exon
so has part: feature:4854935-4854991:-1:exon
so has part: feature:4853485-4853553:-1:exon
so has part: feature:4851671-4851800:-1:exon
so has part: feature:4848304-4848363:-1:exon
so has part: feature:4847329-4847384:-1:exon
so has part: feature:4844055-4844131:-1:exon
so has part: feature:4838880-4839004:-1:exon

position:4867075:-1
position: 4867075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4866975-4867075:-1:exon

position:4866975:-1
position: 4866975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4864056-4864093:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4862110-4862158:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4860236-4860352:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4857557-4857598:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4856559-4856665:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4854935-4854991:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4853485-4853553:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4851671-4851800:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4848304-4848363:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4847329-4847384:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4844055-4844131:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4838880-4839004:-1:exon

sirt2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: sirt2
product: sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae), transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_043680791.1
SIO_010081: sirt2
subclass of: SO_0000673
so part of: sirt2
location: complement(join(4838880..4839004,4844055..4844131,4847329..4847384,4848304..4848363,4851671..4851800,4853485..4853553,4854935..4854991,4856559..4856665,4857557..4857598,4860236..4860352,4862110..4862158,4864056..4864093,4865681..4866281))
location: region:4838880-4866281:-1
so has part: feature:4865681-4866281:-1:exon
so has part: feature:4864056-4864093:-1:exon
so has part: feature:4862110-4862158:-1:exon
so has part: feature:4860236-4860352:-1:exon
so has part: feature:4857557-4857598:-1:exon
so has part: feature:4856559-4856665:-1:exon
so has part: feature:4854935-4854991:-1:exon
so has part: feature:4853485-4853553:-1:exon
so has part: feature:4851671-4851800:-1:exon
so has part: feature:4848304-4848363:-1:exon
so has part: feature:4847329-4847384:-1:exon
so has part: feature:4844055-4844131:-1:exon
so has part: feature:4838880-4839004:-1:exon

position:4866281:-1
position: 4866281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4865681-4866281:-1:exon

position:4865681:-1
position: 4865681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4864056-4864093:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4862110-4862158:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4860236-4860352:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4857557-4857598:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4856559-4856665:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4854935-4854991:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4853485-4853553:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4851671-4851800:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4848304-4848363:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4847329-4847384:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4844055-4844131:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4838880-4839004:-1:exon

sirt2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: sirt2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NAD-dependent protein deacetylase sirtuin-2 isoform X3
translation: MSEPKASEPKTGADSGSESSESQGETSEPSHVSEMDFLRNLLSRSLDLRERQPDKVLEELSIEGIAKYILNKKCEKIICMVGAGISTSAGIPDFRSPGTGLYHNLQKYNLPYPEAIFETDYFKQHPEPFFALAKELYPGQFKPTVSHYFMRMLRDKGLLLRCYTQNIDTLERVVGLQDEDLIEAHGTFYTSHCTNRTCNKLYNLDWMKTQIFTKPLPKCEECNSVVKPDIVFFGDSLPQRFFATIESDFPKCDLLIIMGTSLQVQPFASLASRVSDTTPRLLINKEVSQQVGTRTKNAPAEPFSNFTH
SIO_010081: sirt2
subclass of: SO_0000673
so part of: sirt2
location: complement(join(4838896..4839004,4844055..4844131,4847329..4847384,4848304..4848363,4851671..4851800,4853485..4853553,4854935..4854991,4856559..4856665,4857557..4857598,4860236..4860352,4862110..4862158,4864056..4864093,4868088..4868103))
location: region:4838896-4868103:-1
so has part: feature:4868088-4868103:-1:exon
so has part: feature:4864056-4864093:-1:exon
so has part: feature:4862110-4862158:-1:exon
so has part: feature:4860236-4860352:-1:exon
so has part: feature:4857557-4857598:-1:exon
so has part: feature:4856559-4856665:-1:exon
so has part: feature:4854935-4854991:-1:exon
so has part: feature:4853485-4853553:-1:exon
so has part: feature:4851671-4851800:-1:exon
so has part: feature:4848304-4848363:-1:exon
so has part: feature:4847329-4847384:-1:exon
so has part: feature:4844055-4844131:-1:exon
so has part: feature:4838896-4839004:-1:exon

XP_043536728.1
type: Protein
SIO_000068: ncbiprotein

position:4838896:-1
position: 4838896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4868103:-1
position: 4868103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4868088-4868103:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4864056-4864093:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4862110-4862158:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4860236-4860352:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4857557-4857598:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4856559-4856665:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4854935-4854991:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4853485-4853553:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4851671-4851800:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4848304-4848363:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4847329-4847384:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4844055-4844131:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4838896-4839004:-1:exon

sirt2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: sirt2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NAD-dependent protein deacetylase sirtuin-2 isoform X2
translation: MLSQGEGCLPQSKQEKNGFHPLNQLSSEPKTGADSGSESSESQGETSEPSHVSEMDFLRNLLSRSLDLRERQPDKVLEELSIEGIAKYILNKKCEKIICMVGAGISTSAGIPDFRSPGTGLYHNLQKYNLPYPEAIFETDYFKQHPEPFFALAKELYPGQFKPTVSHYFMRMLRDKGLLLRCYTQNIDTLERVVGLQDEDLIEAHGTFYTSHCTNRTCNKLYNLDWMKTQIFTKPLPKCEECNSVVKPDIVFFGDSLPQRFFATIESDFPKCDLLIIMGTSLQVQPFASLASRVSDTTPRLLINKEVSQQVGTRTKNAPAEPFSNFTH
SIO_010081: sirt2
subclass of: SO_0000673
so part of: sirt2
location: complement(join(4838896..4839004,4844055..4844131,4847329..4847384,4848304..4848363,4851671..4851800,4853485..4853553,4854935..4854991,4856559..4856665,4857557..4857598,4860236..4860352,4862110..4862158,4864056..4864093,4866975..4867050))
location: region:4838896-4867050:-1
so has part: feature:4866975-4867050:-1:exon
so has part: feature:4864056-4864093:-1:exon
so has part: feature:4862110-4862158:-1:exon
so has part: feature:4860236-4860352:-1:exon
so has part: feature:4857557-4857598:-1:exon
so has part: feature:4856559-4856665:-1:exon
so has part: feature:4854935-4854991:-1:exon
so has part: feature:4853485-4853553:-1:exon
so has part: feature:4851671-4851800:-1:exon
so has part: feature:4848304-4848363:-1:exon
so has part: feature:4847329-4847384:-1:exon
so has part: feature:4844055-4844131:-1:exon
so has part: feature:4838896-4839004:-1:exon

XP_043536727.1
type: Protein
SIO_000068: ncbiprotein

position:4867050:-1
position: 4867050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4866975-4867050:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4864056-4864093:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4862110-4862158:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4860236-4860352:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4857557-4857598:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4856559-4856665:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4854935-4854991:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4853485-4853553:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4851671-4851800:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4848304-4848363:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4847329-4847384:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4844055-4844131:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4838896-4839004:-1:exon

sirt2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: sirt2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NAD-dependent protein deacetylase sirtuin-2 isoform X1
translation: MSLVYPIVYFLWSDLFFLQLPHHHSNNSQVLQIHERLNESRNCWRNSSASEPKTGADSGSESSESQGETSEPSHVSEMDFLRNLLSRSLDLRERQPDKVLEELSIEGIAKYILNKKCEKIICMVGAGISTSAGIPDFRSPGTGLYHNLQKYNLPYPEAIFETDYFKQHPEPFFALAKELYPGQFKPTVSHYFMRMLRDKGLLLRCYTQNIDTLERVVGLQDEDLIEAHGTFYTSHCTNRTCNKLYNLDWMKTQIFTKPLPKCEECNSVVKPDIVFFGDSLPQRFFATIESDFPKCDLLIIMGTSLQVQPFASLASRVSDTTPRLLINKEVSQQVGTRTKNAPAEPFSNFTH
SIO_010081: sirt2
subclass of: SO_0000673
so part of: sirt2
location: complement(join(4838896..4839004,4844055..4844131,4847329..4847384,4848304..4848363,4851671..4851800,4853485..4853553,4854935..4854991,4856559..4856665,4857557..4857598,4860236..4860352,4862110..4862158,4864056..4864093,4865681..4865825))
location: region:4838896-4865825:-1
so has part: feature:4865681-4865825:-1:exon
so has part: feature:4864056-4864093:-1:exon
so has part: feature:4862110-4862158:-1:exon
so has part: feature:4860236-4860352:-1:exon
so has part: feature:4857557-4857598:-1:exon
so has part: feature:4856559-4856665:-1:exon
so has part: feature:4854935-4854991:-1:exon
so has part: feature:4853485-4853553:-1:exon
so has part: feature:4851671-4851800:-1:exon
so has part: feature:4848304-4848363:-1:exon
so has part: feature:4847329-4847384:-1:exon
so has part: feature:4844055-4844131:-1:exon
so has part: feature:4838896-4839004:-1:exon

XP_043536726.1
type: Protein
SIO_000068: ncbiprotein

position:4865825:-1
position: 4865825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4865681-4865825:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4864056-4864093:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4862110-4862158:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4860236-4860352:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4857557-4857598:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4856559-4856665:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4854935-4854991:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4853485-4853553:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4851671-4851800:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4848304-4848363:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4847329-4847384:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4844055-4844131:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4838896-4839004:-1:exon

sirt2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: sirt2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NAD-dependent protein deacetylase sirtuin-2 isoform X4
translation: MDFLRNLLSRSLDLRERQPDKVLEELSIEGIAKYILNKKCEKIICMVGAGISTSAGIPDFRSPGTGLYHNLQKYNLPYPEAIFETDYFKQHPEPFFALAKELYPGQFKPTVSHYFMRMLRDKGLLLRCYTQNIDTLERVVGLQDEDLIEAHGTFYTSHCTNRTCNKLYNLDWMKTQIFTKPLPKCEECNSVVKPDIVFFGDSLPQRFFATIESDFPKCDLLIIMGTSLQVQPFASLASRVSDTTPRLLINKEVSQQVGTRTKNAPAEPFSNFTH
SIO_010081: sirt2
subclass of: SO_0000673
so part of: sirt2
location: complement(join(4838896..4839004,4844055..4844131,4847329..4847384,4848304..4848363,4851671..4851800,4853485..4853553,4854935..4854991,4856559..4856665,4857557..4857598,4860236..4860352,4862110))
location: region:4838896-4862110:-1
so has part: feature:4862110-4862110:-1:exon
so has part: feature:4860236-4860352:-1:exon
so has part: feature:4857557-4857598:-1:exon
so has part: feature:4856559-4856665:-1:exon
so has part: feature:4854935-4854991:-1:exon
so has part: feature:4853485-4853553:-1:exon
so has part: feature:4851671-4851800:-1:exon
so has part: feature:4848304-4848363:-1:exon
so has part: feature:4847329-4847384:-1:exon
so has part: feature:4844055-4844131:-1:exon
so has part: feature:4838896-4839004:-1:exon

XP_043536729.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4862110-4862110:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4860236-4860352:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4857557-4857598:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4856559-4856665:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4854935-4854991:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4853485-4853553:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4851671-4851800:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4848304-4848363:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4847329-4847384:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4844055-4844131:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4838896-4839004:-1:exon

sirt2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: sirt2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NAD-dependent protein deacetylase sirtuin-2 isoform X4
translation: MDFLRNLLSRSLDLRERQPDKVLEELSIEGIAKYILNKKCEKIICMVGAGISTSAGIPDFRSPGTGLYHNLQKYNLPYPEAIFETDYFKQHPEPFFALAKELYPGQFKPTVSHYFMRMLRDKGLLLRCYTQNIDTLERVVGLQDEDLIEAHGTFYTSHCTNRTCNKLYNLDWMKTQIFTKPLPKCEECNSVVKPDIVFFGDSLPQRFFATIESDFPKCDLLIIMGTSLQVQPFASLASRVSDTTPRLLINKEVSQQVGTRTKNAPAEPFSNFTH
SIO_010081: sirt2
subclass of: SO_0000673
so part of: sirt2
location: complement(join(4838896..4839004,4844055..4844131,4847329..4847384,4848304..4848363,4851671..4851800,4853485..4853553,4854935..4854991,4856559..4856665,4857557..4857598,4860236..4860352,4862110))
location: region:4838896-4862110:-1
so has part: feature:4862110-4862110:-1:exon
so has part: feature:4860236-4860352:-1:exon
so has part: feature:4857557-4857598:-1:exon
so has part: feature:4856559-4856665:-1:exon
so has part: feature:4854935-4854991:-1:exon
so has part: feature:4853485-4853553:-1:exon
so has part: feature:4851671-4851800:-1:exon
so has part: feature:4848304-4848363:-1:exon
so has part: feature:4847329-4847384:-1:exon
so has part: feature:4844055-4844131:-1:exon
so has part: feature:4838896-4839004:-1:exon

XP_043536730.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4862110-4862110:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4860236-4860352:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4857557-4857598:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4856559-4856665:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4854935-4854991:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4853485-4853553:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4851671-4851800:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4848304-4848363:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4847329-4847384:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4844055-4844131:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4838896-4839004:-1:exon

sirt2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: sirt2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NAD-dependent protein deacetylase sirtuin-2 isoform X4
translation: MDFLRNLLSRSLDLRERQPDKVLEELSIEGIAKYILNKKCEKIICMVGAGISTSAGIPDFRSPGTGLYHNLQKYNLPYPEAIFETDYFKQHPEPFFALAKELYPGQFKPTVSHYFMRMLRDKGLLLRCYTQNIDTLERVVGLQDEDLIEAHGTFYTSHCTNRTCNKLYNLDWMKTQIFTKPLPKCEECNSVVKPDIVFFGDSLPQRFFATIESDFPKCDLLIIMGTSLQVQPFASLASRVSDTTPRLLINKEVSQQVGTRTKNAPAEPFSNFTH
SIO_010081: sirt2
subclass of: SO_0000673
so part of: sirt2
location: complement(join(4838896..4839004,4844055..4844131,4847329..4847384,4848304..4848363,4851671..4851800,4853485..4853553,4854935..4854991,4856559..4856665,4857557..4857598,4860236..4860352,4862110))
location: region:4838896-4862110:-1
so has part: feature:4862110-4862110:-1:exon
so has part: feature:4860236-4860352:-1:exon
so has part: feature:4857557-4857598:-1:exon
so has part: feature:4856559-4856665:-1:exon
so has part: feature:4854935-4854991:-1:exon
so has part: feature:4853485-4853553:-1:exon
so has part: feature:4851671-4851800:-1:exon
so has part: feature:4848304-4848363:-1:exon
so has part: feature:4847329-4847384:-1:exon
so has part: feature:4844055-4844131:-1:exon
so has part: feature:4838896-4839004:-1:exon

XP_043536731.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4862110-4862110:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4860236-4860352:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4857557-4857598:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4856559-4856665:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4854935-4854991:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4853485-4853553:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4851671-4851800:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4848304-4848363:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4847329-4847384:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4844055-4844131:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4838896-4839004:-1:exon

LOC122542770
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: LOC122542770
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4910624..4920674
location: region:4910624-4920674:1
so has part: feature:4910624-4920674:1:exon
subclass of: SO_0000011

122542770
type: Gene
SIO_000068: ncbigene

position:4910624:1
position: 4910624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4920674:1
position: 4920674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4910624-4920674:1:exon

LOC122542770
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 36176
nc RNA class: lncRNA
gene: LOC122542770
product: uncharacterized LOC122542770
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_006309863.1
SIO_010081: LOC122542770
subclass of: SO_0000673
so part of: LOC122542770
location: join(4910624..4910745,4914931..4914955,4916108..4916161,4917962..4918042,4920649..4920674)
location: region:4910624-4920674:1
so has part: feature:4910624-4910745:1:exon
so has part: feature:4914931-4914955:1:exon
so has part: feature:4916108-4916161:1:exon
so has part: feature:4917962-4918042:1:exon
so has part: feature:4920649-4920674:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4910624-4910745:1:exon

position:4910745:1
position: 4910745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4914931-4914955:1:exon

position:4914931:1
position: 4914931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4914955:1
position: 4914955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4916108-4916161:1:exon

position:4916108:1
position: 4916108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4916161:1
position: 4916161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4917962-4918042:1:exon

position:4917962:1
position: 4917962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4918042:1
position: 4918042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4920649-4920674:1:exon

position:4920649:1
position: 4920649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

kptn
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: kptn
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4926922..4959620
location: region:4926922-4959620:1
so has part: feature:4926922-4959620:1:exon
subclass of: SO_0000010

122542771
type: Gene
SIO_000068: ncbigene

position:4926922:1
position: 4926922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4959620:1
position: 4959620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4926922-4959620:1:exon

kptn
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: kptn
product: kaptin (actin binding protein), transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_043680800.1
SIO_010081: kptn
subclass of: SO_0000673
so part of: kptn
location: join(4926922..4927299,4929186..4929268,4930269..4930353,4931519..4931573,4934285..4934360,4934455..4934528,4935491..4935600,4935826..4935942,4939069..4939153,4939838..4939973,4941617..4941826,4942797..4942876,4944141..4944301)
location: region:4926922-4944301:1
so has part: feature:4926922-4927299:1:exon
so has part: feature:4929186-4929268:1:exon
so has part: feature:4930269-4930353:1:exon
so has part: feature:4931519-4931573:1:exon
so has part: feature:4934285-4934360:1:exon
so has part: feature:4934455-4934528:1:exon
so has part: feature:4935491-4935600:1:exon
so has part: feature:4935826-4935942:1:exon
so has part: feature:4939069-4939153:1:exon
so has part: feature:4939838-4939973:1:exon
so has part: feature:4941617-4941826:1:exon
so has part: feature:4942797-4942876:1:exon
so has part: feature:4944141-4944301:1:exon

position:4944301:1
position: 4944301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4926922-4927299:1:exon

position:4927299:1
position: 4927299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4929186-4929268:1:exon

position:4929186:1
position: 4929186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4929268:1
position: 4929268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4930269-4930353:1:exon

position:4930269:1
position: 4930269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4930353:1
position: 4930353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4931519-4931573:1:exon

position:4931519:1
position: 4931519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4931573:1
position: 4931573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4934285-4934360:1:exon

position:4934285:1
position: 4934285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4934360:1
position: 4934360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4934455-4934528:1:exon

position:4934455:1
position: 4934455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4934528:1
position: 4934528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4935491-4935600:1:exon

position:4935491:1
position: 4935491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4935600:1
position: 4935600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4935826-4935942:1:exon

position:4935826:1
position: 4935826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4935942:1
position: 4935942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4939069-4939153:1:exon

position:4939069:1
position: 4939069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4939153:1
position: 4939153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4939838-4939973:1:exon

position:4939838:1
position: 4939838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4939973:1
position: 4939973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4941617-4941826:1:exon

position:4941617:1
position: 4941617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4941826:1
position: 4941826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4942797-4942876:1:exon

position:4942797:1
position: 4942797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4942876:1
position: 4942876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4944141-4944301:1:exon

position:4944141:1
position: 4944141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

kptn
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: kptn
product: kaptin (actin binding protein), transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_043680799.1
SIO_010081: kptn
subclass of: SO_0000673
so part of: kptn
location: join(4926924..4927299,4929186..4929268,4930269..4930353,4931519..4931573,4934285..4934360,4934455..4934528,4935491..4935600,4935826..4935942,4939069..4939153,4939838..4939973,4941617..4941826,4944141..4944336,4959516..4959620)
location: region:4926924-4959620:1
so has part: feature:4926924-4927299:1:exon
so has part: feature:4929186-4929268:1:exon
so has part: feature:4930269-4930353:1:exon
so has part: feature:4931519-4931573:1:exon
so has part: feature:4934285-4934360:1:exon
so has part: feature:4934455-4934528:1:exon
so has part: feature:4935491-4935600:1:exon
so has part: feature:4935826-4935942:1:exon
so has part: feature:4939069-4939153:1:exon
so has part: feature:4939838-4939973:1:exon
so has part: feature:4941617-4941826:1:exon
so has part: feature:4944141-4944336:1:exon
so has part: feature:4959516-4959620:1:exon

position:4926924:1
position: 4926924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4926924-4927299:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4929186-4929268:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4930269-4930353:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4931519-4931573:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4934285-4934360:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4934455-4934528:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4935491-4935600:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4935826-4935942:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4939069-4939153:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4939838-4939973:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4941617-4941826:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4944141-4944336:1:exon

position:4944336:1
position: 4944336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4959516-4959620:1:exon

position:4959516:1
position: 4959516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

kptn
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: kptn
product: kaptin (actin binding protein), transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_043680798.1
SIO_010081: kptn
subclass of: SO_0000673
so part of: kptn
location: join(4926924..4927299,4929186..4929268,4930269..4930353,4931519..4931573,4934285..4934360,4934455..4934528,4935491..4935600,4935826..4935942,4939069..4939153,4939838..4939973,4941617..4941826,4944141..4944336,4950876..4950975)
location: region:4926924-4950975:1
so has part: feature:4926924-4927299:1:exon
so has part: feature:4929186-4929268:1:exon
so has part: feature:4930269-4930353:1:exon
so has part: feature:4931519-4931573:1:exon
so has part: feature:4934285-4934360:1:exon
so has part: feature:4934455-4934528:1:exon
so has part: feature:4935491-4935600:1:exon
so has part: feature:4935826-4935942:1:exon
so has part: feature:4939069-4939153:1:exon
so has part: feature:4939838-4939973:1:exon
so has part: feature:4941617-4941826:1:exon
so has part: feature:4944141-4944336:1:exon
so has part: feature:4950876-4950975:1:exon

position:4950975:1
position: 4950975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4926924-4927299:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4929186-4929268:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4930269-4930353:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4931519-4931573:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4934285-4934360:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4934455-4934528:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4935491-4935600:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4935826-4935942:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4939069-4939153:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4939838-4939973:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4941617-4941826:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4944141-4944336:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4950876-4950975:1:exon

position:4950876:1
position: 4950876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

kptn
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: kptn
product: kaptin (actin binding protein), transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680797.1
SIO_010081: kptn
subclass of: SO_0000673
so part of: kptn
location: join(4926926..4927299,4929186..4929268,4930269..4930353,4931519..4931573,4934285..4934360,4934455..4934528,4935491..4935600,4935826..4935942,4939069..4939153,4939838..4939973,4941617..4941826,4944141..4945268)
location: region:4926926-4945268:1
so has part: feature:4926926-4927299:1:exon
so has part: feature:4929186-4929268:1:exon
so has part: feature:4930269-4930353:1:exon
so has part: feature:4931519-4931573:1:exon
so has part: feature:4934285-4934360:1:exon
so has part: feature:4934455-4934528:1:exon
so has part: feature:4935491-4935600:1:exon
so has part: feature:4935826-4935942:1:exon
so has part: feature:4939069-4939153:1:exon
so has part: feature:4939838-4939973:1:exon
so has part: feature:4941617-4941826:1:exon
so has part: feature:4944141-4945268:1:exon

position:4926926:1
position: 4926926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4945268:1
position: 4945268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4926926-4927299:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4929186-4929268:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4930269-4930353:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4931519-4931573:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4934285-4934360:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4934455-4934528:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4935491-4935600:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4935826-4935942:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4939069-4939153:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4939838-4939973:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4941617-4941826:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4944141-4945268:1:exon

kptn
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: kptn
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: KICSTOR complex protein kaptin isoform X1
translation: MEGPPSSLYGSCPLLEDSFSRLSSQSNIYGLSAFPRPEGGCDLLTATLKGKVINFRYQTPRQKIRPLAKEVQFTYIPVDAEIVSIDAFNKSAPKRGLVVGITFIKDSGDKASPFLNIYCDYEPGSEYNLDSIAQSCLNLELQFTPFQLCHVEIQERQQRETVFLLSGHDHQIHLYKENETLHQFEERPTGLIFPELTGLPSHVLWLDVVNIPDSTRRLTAFGCQNGFVGISHVDQESKVVLQSWDVQQDGPISTVLLFGLPTENSEGYSTGQGAPSVDSDAAKADASLENYNLLVTSAIELSVVYRDVLKNGLSDQAILPESDQFDSVLCALVTDVDFDGVKEILLGTYGQELLCYKSCTMGAPDPEAVESGLAPRLRGEFRLLWKRSFQSPLLSLAYVDLTCDGLSELAVGSLKGLHILQHSLTQTASLVLERLRSQASALGKNLPPGPGSAELAKAGMDTQVASEPEETAGCHHQETVERSS
SIO_010081: kptn
subclass of: SO_0000673
so part of: kptn
location: join(4927068..4927299,4929186..4929268,4930269..4930353,4931519..4931573,4934285..4934360,4934455..4934528,4935491..4935600,4935826..4935942,4939069..4939153,4939838..4939973,4941617..4941826,4944141..4944332)
location: region:4927068-4944332:1
so has part: feature:4927068-4927299:1:exon
so has part: feature:4929186-4929268:1:exon
so has part: feature:4930269-4930353:1:exon
so has part: feature:4931519-4931573:1:exon
so has part: feature:4934285-4934360:1:exon
so has part: feature:4934455-4934528:1:exon
so has part: feature:4935491-4935600:1:exon
so has part: feature:4935826-4935942:1:exon
so has part: feature:4939069-4939153:1:exon
so has part: feature:4939838-4939973:1:exon
so has part: feature:4941617-4941826:1:exon
so has part: feature:4944141-4944332:1:exon

XP_043536732.1
type: Protein
SIO_000068: ncbiprotein

position:4927068:1
position: 4927068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4944332:1
position: 4944332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4927068-4927299:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4929186-4929268:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4930269-4930353:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4931519-4931573:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4934285-4934360:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4934455-4934528:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4935491-4935600:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4935826-4935942:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4939069-4939153:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4939838-4939973:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4941617-4941826:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4944141-4944332:1:exon

kptn
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: kptn
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: KICSTOR complex protein kaptin isoform X1
translation: MEGPPSSLYGSCPLLEDSFSRLSSQSNIYGLSAFPRPEGGCDLLTATLKGKVINFRYQTPRQKIRPLAKEVQFTYIPVDAEIVSIDAFNKSAPKRGLVVGITFIKDSGDKASPFLNIYCDYEPGSEYNLDSIAQSCLNLELQFTPFQLCHVEIQERQQRETVFLLSGHDHQIHLYKENETLHQFEERPTGLIFPELTGLPSHVLWLDVVNIPDSTRRLTAFGCQNGFVGISHVDQESKVVLQSWDVQQDGPISTVLLFGLPTENSEGYSTGQGAPSVDSDAAKADASLENYNLLVTSAIELSVVYRDVLKNGLSDQAILPESDQFDSVLCALVTDVDFDGVKEILLGTYGQELLCYKSCTMGAPDPEAVESGLAPRLRGEFRLLWKRSFQSPLLSLAYVDLTCDGLSELAVGSLKGLHILQHSLTQTASLVLERLRSQASALGKNLPPGPGSAELAKAGMDTQVASEPEETAGCHHQETVERSS
SIO_010081: kptn
subclass of: SO_0000673
so part of: kptn
location: join(4927068..4927299,4929186..4929268,4930269..4930353,4931519..4931573,4934285..4934360,4934455..4934528,4935491..4935600,4935826..4935942,4939069..4939153,4939838..4939973,4941617..4941826,4944141..4944332)
location: region:4927068-4944332:1
so has part: feature:4927068-4927299:1:exon
so has part: feature:4929186-4929268:1:exon
so has part: feature:4930269-4930353:1:exon
so has part: feature:4931519-4931573:1:exon
so has part: feature:4934285-4934360:1:exon
so has part: feature:4934455-4934528:1:exon
so has part: feature:4935491-4935600:1:exon
so has part: feature:4935826-4935942:1:exon
so has part: feature:4939069-4939153:1:exon
so has part: feature:4939838-4939973:1:exon
so has part: feature:4941617-4941826:1:exon
so has part: feature:4944141-4944332:1:exon

XP_043536733.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4927068-4927299:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4929186-4929268:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4930269-4930353:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4931519-4931573:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4934285-4934360:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4934455-4934528:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4935491-4935600:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4935826-4935942:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4939069-4939153:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4939838-4939973:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4941617-4941826:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4944141-4944332:1:exon

kptn
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: kptn
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: KICSTOR complex protein kaptin isoform X1
translation: MEGPPSSLYGSCPLLEDSFSRLSSQSNIYGLSAFPRPEGGCDLLTATLKGKVINFRYQTPRQKIRPLAKEVQFTYIPVDAEIVSIDAFNKSAPKRGLVVGITFIKDSGDKASPFLNIYCDYEPGSEYNLDSIAQSCLNLELQFTPFQLCHVEIQERQQRETVFLLSGHDHQIHLYKENETLHQFEERPTGLIFPELTGLPSHVLWLDVVNIPDSTRRLTAFGCQNGFVGISHVDQESKVVLQSWDVQQDGPISTVLLFGLPTENSEGYSTGQGAPSVDSDAAKADASLENYNLLVTSAIELSVVYRDVLKNGLSDQAILPESDQFDSVLCALVTDVDFDGVKEILLGTYGQELLCYKSCTMGAPDPEAVESGLAPRLRGEFRLLWKRSFQSPLLSLAYVDLTCDGLSELAVGSLKGLHILQHSLTQTASLVLERLRSQASALGKNLPPGPGSAELAKAGMDTQVASEPEETAGCHHQETVERSS
SIO_010081: kptn
subclass of: SO_0000673
so part of: kptn
location: join(4927068..4927299,4929186..4929268,4930269..4930353,4931519..4931573,4934285..4934360,4934455..4934528,4935491..4935600,4935826..4935942,4939069..4939153,4939838..4939973,4941617..4941826,4944141..4944332)
location: region:4927068-4944332:1
so has part: feature:4927068-4927299:1:exon
so has part: feature:4929186-4929268:1:exon
so has part: feature:4930269-4930353:1:exon
so has part: feature:4931519-4931573:1:exon
so has part: feature:4934285-4934360:1:exon
so has part: feature:4934455-4934528:1:exon
so has part: feature:4935491-4935600:1:exon
so has part: feature:4935826-4935942:1:exon
so has part: feature:4939069-4939153:1:exon
so has part: feature:4939838-4939973:1:exon
so has part: feature:4941617-4941826:1:exon
so has part: feature:4944141-4944332:1:exon

XP_043536734.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4927068-4927299:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4929186-4929268:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4930269-4930353:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4931519-4931573:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4934285-4934360:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4934455-4934528:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4935491-4935600:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4935826-4935942:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4939069-4939153:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4939838-4939973:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4941617-4941826:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4944141-4944332:1:exon

kptn
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: kptn
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: KICSTOR complex protein kaptin isoform X2
translation: MEGPPSSLYGSCPLLEDSFSRLSSQSNIYGLSAFPRPEGGCDLLTATLKGKVINFRYQTPRQKIRPLAKEVQFTYIPVDAEIVSIDAFNKSAPKRGLVVGITFIKDSGDKASPFLNIYCDYEPGSEYNLDSIAQSCLNLELQFTPFQLCHVEIQERQQRETVFLLSGHDHQIHLYKENETLHQFEERPTGLIFPELTGLPSHVLWLDVVNIPDSTRRLTAFGCQNGFVGISHVDQESKVVLQSWDVQQDGPISTVLLFGLPTENSEGYSTGQGAPSVDSDAAKADASLENYNLLVTSAIELSVVYRDVLKNGLSDQAILPESDQFDSVLCALVTDVDFDGVKEILLGTYGQELLCYKSCTMGAPDPEAVESGLAPRLRGEFRLLWKRSFQSPLLSLAYVDLTCDGLSELAVGSLKGLHILQLPYCHFRRHLRVSHIAVGLESHVGQASTVSPRQPAWS
SIO_010081: kptn
subclass of: SO_0000673
so part of: kptn
location: join(4927068..4927299,4929186..4929268,4930269..4930353,4931519..4931573,4934285..4934360,4934455..4934528,4935491..4935600,4935826..4935942,4939069..4939153,4939838..4939973,4941617..4941826,4942797..4942876,4944141..4944174)
location: region:4927068-4944174:1
so has part: feature:4927068-4927299:1:exon
so has part: feature:4929186-4929268:1:exon
so has part: feature:4930269-4930353:1:exon
so has part: feature:4931519-4931573:1:exon
so has part: feature:4934285-4934360:1:exon
so has part: feature:4934455-4934528:1:exon
so has part: feature:4935491-4935600:1:exon
so has part: feature:4935826-4935942:1:exon
so has part: feature:4939069-4939153:1:exon
so has part: feature:4939838-4939973:1:exon
so has part: feature:4941617-4941826:1:exon
so has part: feature:4942797-4942876:1:exon
so has part: feature:4944141-4944174:1:exon

XP_043536735.1
type: Protein
SIO_000068: ncbiprotein

position:4944174:1
position: 4944174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4927068-4927299:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4929186-4929268:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4930269-4930353:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4931519-4931573:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4934285-4934360:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4934455-4934528:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4935491-4935600:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4935826-4935942:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4939069-4939153:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4939838-4939973:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4941617-4941826:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4942797-4942876:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4944141-4944174:1:exon

kptn
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: kptn
product: kaptin (actin binding protein), transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680801.1
SIO_010081: kptn
subclass of: SO_0000673
so part of: kptn
location: join(4927207..4927773,4929186..4929268,4930269..4930353,4931519..4931573,4934285..4934360,4934455..4934528,4935491..4935600,4935826..4935942,4939069..4939153,4939838..4939973,4941617..4941826,4944141..4945268)
location: region:4927207-4945268:1
so has part: feature:4927207-4927773:1:exon
so has part: feature:4929186-4929268:1:exon
so has part: feature:4930269-4930353:1:exon
so has part: feature:4931519-4931573:1:exon
so has part: feature:4934285-4934360:1:exon
so has part: feature:4934455-4934528:1:exon
so has part: feature:4935491-4935600:1:exon
so has part: feature:4935826-4935942:1:exon
so has part: feature:4939069-4939153:1:exon
so has part: feature:4939838-4939973:1:exon
so has part: feature:4941617-4941826:1:exon
so has part: feature:4944141-4945268:1:exon

position:4927207:1
position: 4927207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4927207-4927773:1:exon

position:4927773:1
position: 4927773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4929186-4929268:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4930269-4930353:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4931519-4931573:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4934285-4934360:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4934455-4934528:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4935491-4935600:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4935826-4935942:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4939069-4939153:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4939838-4939973:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4941617-4941826:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4944141-4945268:1:exon

kptn
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: kptn
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: KICSTOR complex protein kaptin isoform X3
translation: MDAEIVSIDAFNKSAPKRGLVVGITFIKDSGDKASPFLNIYCDYEPGSEYNLDSIAQSCLNLELQFTPFQLCHVEIQERQQRETVFLLSGHDHQIHLYKENETLHQFEERPTGLIFPELTGLPSHVLWLDVVNIPDSTRRLTAFGCQNGFVGISHVDQESKVVLQSWDVQQDGPISTVLLFGLPTENSEGYSTGQGAPSVDSDAAKADASLENYNLLVTSAIELSVVYRDVLKNGLSDQAILPESDQFDSVLCALVTDVDFDGVKEILLGTYGQELLCYKSCTMGAPDPEAVESGLAPRLRGEFRLLWKRSFQSPLLSLAYVDLTCDGLSELAVGSLKGLHILQHSLTQTASLVLERLRSQASALGKNLPPGPGSAELAKAGMDTQVASEPEETAGCHHQETVERSS
SIO_010081: kptn
subclass of: SO_0000673
so part of: kptn
location: join(4927773,4929186..4929268,4930269..4930353,4931519..4931573,4934285..4934360,4934455..4934528,4935491..4935600,4935826..4935942,4939069..4939153,4939838..4939973,4941617..4941826,4944141..4944332)
location: region:4927773-4944332:1
so has part: feature:4927773-4927773:1:exon
so has part: feature:4929186-4929268:1:exon
so has part: feature:4930269-4930353:1:exon
so has part: feature:4931519-4931573:1:exon
so has part: feature:4934285-4934360:1:exon
so has part: feature:4934455-4934528:1:exon
so has part: feature:4935491-4935600:1:exon
so has part: feature:4935826-4935942:1:exon
so has part: feature:4939069-4939153:1:exon
so has part: feature:4939838-4939973:1:exon
so has part: feature:4941617-4941826:1:exon
so has part: feature:4944141-4944332:1:exon

XP_043536736.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4927773-4927773:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4929186-4929268:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4930269-4930353:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4931519-4931573:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4934285-4934360:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4934455-4934528:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4935491-4935600:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4935826-4935942:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4939069-4939153:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4939838-4939973:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4941617-4941826:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4944141-4944332:1:exon

LOC122542686
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: LOC122542686
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4951078..4995171)
location: region:4951078-4995171:-1
so has part: feature:4951078-4995171:-1:exon
subclass of: SO_0000010

122542686
type: Gene
SIO_000068: ncbigene

position:4951078:-1
position: 4951078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4995171:-1
position: 4995171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4951078-4995171:-1:exon

LOC122542686
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542686
product: ras and Rab interactor 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_043680664.1
SIO_010081: LOC122542686
subclass of: SO_0000673
so part of: LOC122542686
location: complement(join(4951078..4951876,4953712..4953875,4955638..4955769,4957718..4958023,4961517..4962227,4969016..4969408,4971783..4971874,4974472..4974544,4990102..4990210,4994959..4995171))
location: region:4951078-4995171:-1
so has part: feature:4994959-4995171:-1:exon
so has part: feature:4990102-4990210:-1:exon
so has part: feature:4974472-4974544:-1:exon
so has part: feature:4971783-4971874:-1:exon
so has part: feature:4969016-4969408:-1:exon
so has part: feature:4961517-4962227:-1:exon
so has part: feature:4957718-4958023:-1:exon
so has part: feature:4955638-4955769:-1:exon
so has part: feature:4953712-4953875:-1:exon
so has part: feature:4951078-4951876:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4994959-4995171:-1:exon

position:4994959:-1
position: 4994959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4990102-4990210:-1:exon

position:4990102:-1
position: 4990102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4990210:-1
position: 4990210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4974472-4974544:-1:exon

position:4974472:-1
position: 4974472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4974544:-1
position: 4974544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4971783-4971874:-1:exon

position:4971783:-1
position: 4971783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4971874:-1
position: 4971874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4969016-4969408:-1:exon

position:4969016:-1
position: 4969016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4969408:-1
position: 4969408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4961517-4962227:-1:exon

position:4961517:-1
position: 4961517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4962227:-1
position: 4962227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4957718-4958023:-1:exon

position:4957718:-1
position: 4957718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4958023:-1
position: 4958023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4955638-4955769:-1:exon

position:4955638:-1
position: 4955638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4955769:-1
position: 4955769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4953712-4953875:-1:exon

position:4953712:-1
position: 4953712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4953875:-1
position: 4953875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4951078-4951876:-1:exon

position:4951876:-1
position: 4951876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC122542686
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542686
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras and Rab interactor 3-like
translation: MVLSLSPCSPHKQLCNGAYPRLCEKEEDPGNVPVPTKLTLFDKLMLSHNIWLQLGIESAQVRDILRNQPPGTFLMWSNNCGKNKMLTVRLGNGASGCQDFVVKEDAFVLSLEHSYLGFSSLFQMIAYYCVSRDILPFRLQLPAAILHANSKEHLEQISALGMMFWESLFNQSQDTTFREVEGDALAVNPTSGFGLLKQQPLPMCSIQVTAENGALFFINPLFLREHGDSWVTKVPLQTQAFGPSCLATRNKTPAWTGCKATPTSPRNQQEAASANAVETLDSGNSLEEEDAFKGPSLGRDMVSDNNVAALRRKNFTRRAAWSWGEDAESEAPESEDMERERPRPKSTSSETGPGSSRTLPAHYRASWLGAGERGTLPSLTKSHSEASLFACDSPPLPSISELDSLSISSVEDEGDVTSAAQMQQKRPSSGLSDRVRYRLSAVGHALTGLVSADRRVRNKIEELGQDKGSYFGGLVQGFISYTRQNRYKYASSTEMLQAIYHMIASLRNYLSQSSELTPILDQTEHEECDIDSSIEKALQKCILKPLRDHIYSCLLEFHTKDGSLGKLRDKQLVLQKQSLADLGITARVPDSAALDKIQGKFNTMHMLYSPWKKVTQLLKACKLIYEAMSGTSGQPHGADDFLPVLTYVLASSNLTNLSLDVEYMMELLDQSQLQGEGGYYLTTMFGALYHISNFQPRQFTRQMSDEAKSSIRQWRTRRTIHYTQSKRRSAQDLLHISLREPSGNQVPILAPAHMSVAEVEKACAEKFDVPDPESYRLFVVQGDSYQPLEGDSCPQKVREELKQKGETAFHFVYGLKDRSQCPQTPSEDRQPTP
SIO_010081: LOC122542686
subclass of: SO_0000673
so part of: LOC122542686
location: complement(join(4951568..4951876,4953712..4953875,4955638..4955769,4957718..4958023,4961517..4962227,4969016..4969408,4971783..4971874,4974472..4974544,4990102..4990210,4994959..4995171))
location: region:4951568-4995171:-1
so has part: feature:4994959-4995171:-1:exon
so has part: feature:4990102-4990210:-1:exon
so has part: feature:4974472-4974544:-1:exon
so has part: feature:4971783-4971874:-1:exon
so has part: feature:4969016-4969408:-1:exon
so has part: feature:4961517-4962227:-1:exon
so has part: feature:4957718-4958023:-1:exon
so has part: feature:4955638-4955769:-1:exon
so has part: feature:4953712-4953875:-1:exon
so has part: feature:4951568-4951876:-1:exon

XP_043536599.1
type: Protein
SIO_000068: ncbiprotein

position:4951568:-1
position: 4951568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4994959-4995171:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4990102-4990210:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4974472-4974544:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4971783-4971874:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4969016-4969408:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4961517-4962227:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4957718-4958023:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4955638-4955769:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4953712-4953875:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4951568-4951876:-1:exon

LOC122542932
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: LOC122542932
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5002538..5004378
location: region:5002538-5004378:1
so has part: feature:5002538-5004378:1:exon
subclass of: SO_0000011

122542932
type: Gene
SIO_000068: ncbigene

position:5002538:1
position: 5002538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5004378:1
position: 5004378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5002538-5004378:1:exon

LOC122542932
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 36176
nc RNA class: lncRNA
gene: LOC122542932
product: uncharacterized LOC122542932
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_006309889.1
SIO_010081: LOC122542932
subclass of: SO_0000673
so part of: LOC122542932
location: join(5002538..5002654,5003468..5004378)
location: region:5002538-5004378:1
so has part: feature:5002538-5002654:1:exon
so has part: feature:5003468-5004378:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5002538-5002654:1:exon

position:5002654:1
position: 5002654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5003468-5004378:1:exon

position:5003468:1
position: 5003468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC122542773
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: LOC122542773
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5027893..5052785)
location: region:5027893-5052785:-1
so has part: feature:5027893-5052785:-1:exon
subclass of: SO_0000010

122542773
type: Gene
SIO_000068: ncbigene

position:5027893:-1
position: 5027893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5052785:-1
position: 5052785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5027893-5052785:-1:exon

LOC122542773
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542773
product: alpha-soluble NSF attachment protein, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680802.1
SIO_010081: LOC122542773
subclass of: SO_0000673
so part of: LOC122542773
location: complement(join(5027893..5028955,5030277..5030396,5031322..5031426,5032632..5032716,5033822..5033877,5034726..5034803,5038513..5038559,5041256..5041372,5043047..5043126,5052627..5052785))
location: region:5027893-5052785:-1
so has part: feature:5052627-5052785:-1:exon
so has part: feature:5043047-5043126:-1:exon
so has part: feature:5041256-5041372:-1:exon
so has part: feature:5038513-5038559:-1:exon
so has part: feature:5034726-5034803:-1:exon
so has part: feature:5033822-5033877:-1:exon
so has part: feature:5032632-5032716:-1:exon
so has part: feature:5031322-5031426:-1:exon
so has part: feature:5030277-5030396:-1:exon
so has part: feature:5027893-5028955:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5052627-5052785:-1:exon

position:5052627:-1
position: 5052627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5043047-5043126:-1:exon

position:5043047:-1
position: 5043047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5043126:-1
position: 5043126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5041256-5041372:-1:exon

position:5041256:-1
position: 5041256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5041372:-1
position: 5041372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5038513-5038559:-1:exon

position:5038513:-1
position: 5038513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5038559:-1
position: 5038559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5034726-5034803:-1:exon

position:5034726:-1
position: 5034726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5034803:-1
position: 5034803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5033822-5033877:-1:exon

position:5033822:-1
position: 5033822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5033877:-1
position: 5033877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5032632-5032716:-1:exon

position:5032632:-1
position: 5032632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5032716:-1
position: 5032716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5031322-5031426:-1:exon

position:5031322:-1
position: 5031322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5031426:-1
position: 5031426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5030277-5030396:-1:exon

position:5030277:-1
position: 5030277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5030396:-1
position: 5030396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5027893-5028955:-1:exon

position:5028955:-1
position: 5028955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC122542773
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: LOC122542773
product: alpha-soluble NSF attachment protein, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_043680803.1
SIO_010081: LOC122542773
subclass of: SO_0000673
so part of: LOC122542773
location: complement(join(5027893..5028955,5030277..5030396,5031322..5031426,5032632..5032716,5033822..5033877,5034726..5034803,5041256..5041315))
location: region:5027893-5041315:-1
so has part: feature:5041256-5041315:-1:exon
so has part: feature:5034726-5034803:-1:exon
so has part: feature:5033822-5033877:-1:exon
so has part: feature:5032632-5032716:-1:exon
so has part: feature:5031322-5031426:-1:exon
so has part: feature:5030277-5030396:-1:exon
so has part: feature:5027893-5028955:-1:exon

position:5041315:-1
position: 5041315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5041256-5041315:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5034726-5034803:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5033822-5033877:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5032632-5032716:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5031322-5031426:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5030277-5030396:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5027893-5028955:-1:exon

LOC122542773
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542773
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-soluble NSF attachment protein isoform X1
translation: MDNSAKEREAMGLMAEAEKKVRSARSFIVSLFGGSSRLEEACEMYARAANMFKMAKNWSAAGNAFCEAAKLHLHLQSKHDAATNFVDAGNAFKKADPQEAINCLNRAIEIYTDMGRFTIAAKHHISIAEIYESELVDIEKAIAHYEQAADYYKGEESNSSANKCLLKVATYAAQLEQYPKAVEIYEQVGTTAMDSPLLKYSAKEYFFKAALCHFCVDMLNAKLAVTKYEEMFPAFSDSRECKLVKKLLDAFEEQNVDGYTDAVKEYDSISRLDQWLTTMLLRIKKTIQGEESDLR
SIO_010081: LOC122542773
subclass of: SO_0000673
so part of: LOC122542773
location: complement(join(5028854..5028955,5030277..5030396,5031322..5031426,5032632..5032716,5033822..5033877,5034726..5034803,5038513..5038559,5041256..5041372,5043047..5043126,5052627..5052724))
location: region:5028854-5052724:-1
so has part: feature:5052627-5052724:-1:exon
so has part: feature:5043047-5043126:-1:exon
so has part: feature:5041256-5041372:-1:exon
so has part: feature:5038513-5038559:-1:exon
so has part: feature:5034726-5034803:-1:exon
so has part: feature:5033822-5033877:-1:exon
so has part: feature:5032632-5032716:-1:exon
so has part: feature:5031322-5031426:-1:exon
so has part: feature:5030277-5030396:-1:exon
so has part: feature:5028854-5028955:-1:exon

XP_043536737.1
type: Protein
SIO_000068: ncbiprotein

position:5028854:-1
position: 5028854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5052724:-1
position: 5052724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5052627-5052724:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5043047-5043126:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5041256-5041372:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5038513-5038559:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5034726-5034803:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5033822-5033877:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5032632-5032716:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5031322-5031426:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5030277-5030396:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5028854-5028955:-1:exon

LOC122542773
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 36176
gene: LOC122542773
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-soluble NSF attachment protein isoform X2
translation: MMRLPTLWMQEMPSRKLTPKGRFTIAAKHHISIAEIYESELVDIEKAIAHYEQAADYYKGEESNSSANKCLLKVATYAAQLEQYPKAVEIYEQVGTTAMDSPLLKYSAKEYFFKAALCHFCVDMLNAKLAVTKYEEMFPAFSDSRECKLVKKLLDAFEEQNVDGYTDAVKEYDSISRLDQWLTTMLLRIKKTIQGEESDLR
SIO_010081: LOC122542773
subclass of: SO_0000673
so part of: LOC122542773
location: complement(join(5028854..5028955,5030277..5030396,5031322..5031426,5032632..5032716,5033822..5033877,5034726..5034803,5041256..5041315))
location: region:5028854-5041315:-1
so has part: feature:5041256-5041315:-1:exon
so has part: feature:5034726-5034803:-1:exon
so has part: feature:5033822-5033877:-1:exon
so has part: feature:5032632-5032716:-1:exon
so has part: feature:5031322-5031426:-1:exon
so has part: feature:5030277-5030396:-1:exon
so has part: feature:5028854-5028955:-1:exon

XP_043536738.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5041256-5041315:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5034726-5034803:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5033822-5033877:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5032632-5032716:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5031322-5031426:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5030277-5030396:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5028854-5028955:-1:exon

sars2
type: Gene
subclass of: SO_0000704
RO_0002162: 36176
gene: sars2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5055645..5104535
location: region:5055645-5104535:1
so has part: feature:5055645-5104535:1:exon
subclass of: SO_0000010

122542687
type: Gene
SIO_000068: ncbigene

position:5055645:1
position: 5055645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5104535:1
position: 5104535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5055645-5104535:1:exon

sars2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 36176
gene: sars2
product: seryl-tRNA synthetase 2, mitochondrial
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_043680665.1
SIO_010081: sars2
subclass of: SO_0000673
so part of: sars2
location: join(5055645..5055978,5058571..5058666,5059569..5059598,5061724..5061864,5065427..5065481,5067643..5067706,5079946..5080051,5082024..5082071,5084845..5084953,5087534..5087579,5098136..5098229,5101106..5101198,5103032..5103097,5104227..5104535)
location: region:5055645-5104535:1
so has part: feature:5055645-5055978:1:exon
so has part: feature:5058571-5058666:1:exon
so has part: feature:5059569-5059598:1:exon
so has part: feature:5061724-5061864:1:exon
so has part: feature:5065427-5065481:1:exon
so has part: feature:5067643-5067706:1:exon
so has part: feature:5079946-5080051:1:exon
so has part: feature:5082024-5082071:1:exon
so has part: feature:5084845-5084953:1:exon
so has part: feature:5087534-5087579:1:exon
so has part: feature:5098136-5098229:1:exon
so has part: feature:5101106-5101198:1:exon
so has part: feature:5103032-5103097:1:exon
so has part: feature:5104227-5104535:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5055645-5055978:1:exon

position:5055978:1
position: 5055978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5058571-5058666:1:exon

position:5058571:1
position: 5058571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5058666:1
position: 5058666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5059569-5059598:1:exon

position:5059569:1
position: 5059569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5059598:1
position: 5059598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5061724-5061864:1:exon

position:5061724:1
position: 5061724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5061864:1
position: 5061864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5065427-5065481:1:exon