Lachnoclostridium phytofermentans ISDg, complete sequence.
type: Entry
definition: Lachnoclostridium phytofermentans ISDg, complete sequence.
sequence version: NC_010001.1
sequence date: 2023-04-11
sequence: sequence
division: CON
label: NC_010001.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02598360
keyword: RefSeq
source: Lachnoclostridium phytofermentans ISDg
organism: Lachnoclostridium phytofermentans ISDg
taxonomy: Bacteria; Bacillota; Clostridia; Eubacteriales; Lachnospiraceae.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP000885.1.\nURL -- http://www.jgi.doe.gov\nJGI Project ID: 3634491\nSource DNA and bacteria available from Susan Leschine\n(suel@microbio.umass.edu)\nContacts: Susan Leschine (suel@microbio.umass.edu)\n Paul Richardson (microbes@cuba.jgi-psf.org)\nQuality assurance done by JGI-Stanford\nAnnotation done by JGI-ORNL and JGI-PGF\nFinishing done by JGI-LANL\nFinished microbial genomes have been curated to close all gaps with\ngreater than 98% coverage of at least two independent clones. Each\nbase pair has a minimum q (quality) value of 30 and the total error\nrate is less than one per 50000.\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. it is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/11/2023 01:14:35\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,121\nCDSs (total) :: 4,032\nGenes (coding) :: 3,988\nCDSs (with protein) :: 3,988\nGenes (RNA) :: 89\nrRNAs :: 8, 8, 8 (5S, 16S, 23S)\ncomplete rRNAs :: 8, 8, 8 (5S, 16S, 23S)\ntRNAs :: 61\nncRNAs :: 4\nPseudo Genes (total) :: 44\nCDSs (without protein) :: 44\nPseudo Genes (ambiguous residues) :: 0 of 44\nPseudo Genes (frameshifted) :: 12 of 44\nPseudo Genes (incomplete) :: 31 of 44…

sequence
subclass of: SO_0000340
sequence length: 4847594
topology: circular
so has quality: SO_0000988
location: 1..4847594
location: region:1-4847594:1
RO_0002162: 357809

NC_010001
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02598360
type: BioSample
SIO_000068: biosample

1
title: Complete sequence of Clostridium phytofermentans ISDg
author: Leschine, S.B.
author: Warnick, T.A.
author: Blanchard, J.L.
author: Schnell, D.J.
author: Petit, E.L.
author: LaTouf, W.G.
journal: Unpublished

2
title: Direct Submission
author: Copeland, A.
author: Lucas, S.
author: Lapidus, A.
author: Barry, K.
author: Glavina del Rio, T.
author: Dalin, E.
author: Tice, H.
author: Pitluck, S.
author: Kiss, H.
author: Brettin, T.
author: Bruce, D.
author: Detter, J.C.
author: Han, C.
author: Kuske, C.
author: Schmutz, J.
author: Larimer, F.
author: Land, M.
author: Hauser, L.
author: Kyrpides, N.
author: Kim, E.A.
author: Richardson, P.
journal: Submitted (08-NOV-2007) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4847594:1
position: 4847594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-4847594:1:source
so part of: sequence
organism: Lachnoclostridium phytofermentans ISDg
mol type: genomic DNA
strain: ISDg
type material: type strain of Lachnoclostridium phytofermentans

357809
type: Taxonomy
SIO_000068: taxonomy

CPHY_RS00010
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: dnaA
locus tag: CPHY_RS00010
old locus tag: Cphy_0001
so part of: sequence
location: 75..1436
location: region:75-1436:1
so has part: feature:75-1436:1:exon
subclass of: SO_0000010

position:75:1
position: 75
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1436:1
position: 1436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75-1436:1:exon

CPHY_RS00010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: dnaA
locus tag: CPHY_RS00010
old locus tag: Cphy_0001
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198035.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO process: GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chromosomal replication initiator protein DnaA
translation: MKSLIQEKWNEILEFLKIEYNVTEVSYKTWLLPLKVYDVKDNVIKLSVDDTKIGANSLDFIKNKYSQFLKTAIAEVINQDFEIEFVLLSQTKAEEKVQTQAPNKIKNESLSYLNPRYTFDTFVVGANNNLAHAASLAVAESPAEIYNPLFIYGGVGLGKTHLMHSIAHYILEQNPNSKVLYVTSEKFTNELIESIRNADTTPTEFREKYRNIDVLLIDDIQFIIGKERTQEEFFHTFNTLHESKKQIIISSDKPPKDILTLEERLRSRFEWGLTVDIQSPDYETRMAILKKKEELDCLTIDDEVMKYIASNIKSNIRELEGALTKIVALSRLKKKEVDVILAEEALKDLISPDNKKTVTLDLIIEVVSEHFTTSTSEIYSDNRSRNIAYPRQIAMYLCRKLTSLSLTDIGKMMGNRDHSTVLHGCNKVEKDIKKDPSFQNTIDVLIKKINPTP
SIO_010081: CPHY_RS00010
subclass of: SO_0000673
so part of: CPHY_RS00010
location: 75..1436
location: region:75-1436:1
so has part: feature:75-1436:1:exon

WP_012198035.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75-1436:1:exon

CPHY_RS00015
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: dnaN
locus tag: CPHY_RS00015
old locus tag: Cphy_0002
so part of: sequence
location: 1849..2961
location: region:1849-2961:1
so has part: feature:1849-2961:1:exon
subclass of: SO_0000010

position:1849:1
position: 1849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2961:1
position: 2961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1849-2961:1:exon

CPHY_RS00015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: dnaN
locus tag: CPHY_RS00015
old locus tag: Cphy_0002
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005952430.1
GO component: GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit beta
translation: MKIACQKNELLNSVNIALKAVSSKSTMPILECIVIEVQNDTIKLISNDMEIGIETIVKGSIISNGSVAINAKVFSEIIRKLPDNEVNVETDEKFMTTITCEKAKFTIAGKSAEEFPMLPTIEKKEAIELSQFTLKEVIRQTVFSISDNESNKIMTGELFEINGNELRVVSLDGHRISIRKVELKNSYAPKKILVPGKTLQEVSKILSGEISDEVFIYYTDRHVLFVFDDTLVLSRLIEGEYYKIDQMLSGDYETKVKINKKEFLSCIDRATLLIKETEKKPIIVGIEDKKLELKINTSIGTMDEDIDIEKEGKDILIGFNPKFLIDALRVIDDEEVEIYLINPKAPCFIKDKEESYIYLILPVSFNAAQY
SIO_010081: CPHY_RS00015
subclass of: SO_0000673
so part of: CPHY_RS00015
location: 1849..2961
location: region:1849-2961:1
so has part: feature:1849-2961:1:exon

WP_012198036.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1849-2961:1:exon

CPHY_RS00020
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00020
old locus tag: Cphy_0003
so part of: sequence
location: 3099..3314
location: region:3099-3314:1
so has part: feature:3099-3314:1:exon
subclass of: SO_0000010

position:3099:1
position: 3099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3314:1
position: 3314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3099-3314:1:exon

CPHY_RS00020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00020
old locus tag: Cphy_0003
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005334675.1
GO function: GO:0003723 - RNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA-binding S4 domain-containing protein
translation: MEKIILREEFIKLGQALKAAGLVDSGVEAKDVITEGLVKVNGVVEYQRGKKIHGGDSIEFNNEIVQIVDHE
SIO_010081: CPHY_RS00020
subclass of: SO_0000673
so part of: CPHY_RS00020
location: 3099..3314
location: region:3099-3314:1
so has part: feature:3099-3314:1:exon

WP_012198037.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3099-3314:1:exon

CPHY_RS00025
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: recF
locus tag: CPHY_RS00025
old locus tag: Cphy_0004
so part of: sequence
location: 3870..4952
location: region:3870-4952:1
so has part: feature:3870-4952:1:exon
subclass of: SO_0000010

position:3870:1
position: 3870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4952:1
position: 4952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3870-4952:1:exon

CPHY_RS00025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: recF
locus tag: CPHY_RS00025
old locus tag: Cphy_0004
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198038.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA replication/repair protein RecF
translation: MIVKSLELSNFRNYENLSLEFSPSTNILYGDNAQGKTNILEAVFLCATTKSHKGSKDREIIKLQSEEAHIRMRINRDDVDHRLDMHLKKNKPKGVAIDGIPIKRSSELFGIINVVFFSPEDLSIIKNGPSERRRFIDMELCQLSKLYLHNLINYNKVLNQRNNLLKQIGFNKSLLDTLYVWDQQLIHFGSALIKERDAFMKSMNELIIALHKKLSDGKEELEIVYEASVAESEFENKLKKSMERDIALKVTNVGPHRDDLSFLINGQDVRKYGSQGQQRTAALSLKLAEIELVKQVTKDKPILLLDDVLSELDRKRQNQLLDSIVGIQTIVTCTGLEEFVNNRIETDRIYKVIQGTVEKG
SIO_010081: CPHY_RS00025
subclass of: SO_0000673
so part of: CPHY_RS00025
location: 3870..4952
location: region:3870-4952:1
so has part: feature:3870-4952:1:exon

WP_012198038.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3870-4952:1:exon

CPHY_RS00030
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: gyrB
locus tag: CPHY_RS00030
old locus tag: Cphy_0005
so part of: sequence
location: 4986..6914
location: region:4986-6914:1
so has part: feature:4986-6914:1:exon
subclass of: SO_0000010

position:4986:1
position: 4986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6914:1
position: 6914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4986-6914:1:exon

CPHY_RS00030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: gyrB
locus tag: CPHY_RS00030
old locus tag: Cphy_0005
EC number: 5.6.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004613289.1
GO component: GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO function: GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA topoisomerase (ATP-hydrolyzing) subunit B
translation: MSKDYGADQIQILEGLEAVRKRPGMYIGSTSSRGLHHLVYEIVDNAVDEALAGYCNTIDVSINPDNSITVIDNGRGIPVETNKKKGISTVEVVFTILHAGGKFGGGGYKVSGGLHGVGASVVNALSEWLEVTVELEGKMYKQRYECGKVIEPLRVVGESDRTGTTVSFLPDRSIFEETVYDYDILKQRLREMAFLTKGLKIILRDLRTSEEEGNTEPNVKEFHYEGGIKEYVQYLNKHKSNLYPEIIYCEGTRDSVYVEVAMQHNDSYSESCYSFVNNITTPEGGTHYTGFKNAITKTFNDFARQMKFLKDNETNLSGEDIREGLTAIISIKLPDPQFEGQTKQKLGNSEARAAVDSVVSEQLTYFLEQNPSVAKIILEKAVLAQRARDAARKARDLTRRKTALEGMSLPGKLADCSDKDPKNCEIYIVEGDSAGGSAKTARSRATQAILPLRGKILNVEKSRLDKILVNNEIKAMITAFGTGISDDFDISKLRYHKIIIMTDADVDGAHISTLLLTFLYRFMPELIRDGYVYLAQPPLYKVEKSKQVWYAYSDEDLNNILLQIGRDQNNKIQRYKGLGEMDAEQLWETTMDPERRVLLRVKMDEENSSEIDLTFTTLMGDNVEPRREFIEANAKYVKNLDI
SIO_010081: CPHY_RS00030
subclass of: SO_0000673
so part of: CPHY_RS00030
location: 4986..6914
location: region:4986-6914:1
so has part: feature:4986-6914:1:exon

WP_012198039.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4986-6914:1:exon

CPHY_RS00035
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: gyrA
locus tag: CPHY_RS00035
old locus tag: Cphy_0006
so part of: sequence
location: 6932..9631
location: region:6932-9631:1
so has part: feature:6932-9631:1:exon
subclass of: SO_0000010

position:6932:1
position: 6932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9631:1
position: 9631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6932-9631:1:exon

CPHY_RS00035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: gyrA
locus tag: CPHY_RS00035
old locus tag: Cphy_0006
EC number: 5.6.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016285383.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006259 - DNA metabolic process [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA gyrase subunit A
translation: MDENIFDKVHDVDLKKTMETSYIEYAMSVIAARALPDVRDGLKPVQRRILYAMIELNNGPDKPHRKCARIVGDTMGKYHPHGDSSIYGALVNLAQEWSTRYPLVDGHGNFGSVDGDGAAAMRYTEARLSKISMEMLSDINKDTVDFAPNFDETEKEPLVLPARYPNLLVNGTSGIAVGMATNIPPHNMREIIGAVVRIIDNKIEEKETTIEELLEIVKGPDFPTGAMILGTRGIEEAYRTGRGKIRVRAVTNIEPMANGKNRIIVTELPYMVNKARLIEKIAELVRDKKIDGITELRDESDREGMRICIELRRDVNANVILNQLYKHTQLQDTFGVIMLALVNNQPKVLTLLEMLSYYLKHQEEVVTRRITYDLNKAKERAHILEGLLKALDFIDEVINIIRASKNGAMAKERLIERFEFDDIQAQAIIDMRLRALTGLEREKLQDEFAELQRRIAEFEAILADEKLLLGVIKGEIQVINDKFGDERRTSIGFDEFDISMEDLIPDENTVIAMTRLGYIKRMTIDNFKSQHRGGKGIKGMQTIDEDFIEDLFMTTTHHYIMFFTNKGRVYRLKAYEIPESSRTARGTAIVNLLQLLPEERITAIIALKEYKDNRYLFMATKDGIVKKTKIKEYQNIRKTGLQAINLREDDELIEVKTTNSQKDIVLVTKNGMCIRFHEKDVRNTGRASMGVIGMNLTNGDEVVAMQIHTQGKYLLTVSEYGLGKLTDLDEFTPQRRGGKGVKCYKITEKTGNVVGAKAVNEEHEVMIITNEGIIIRLEVNGISILGRITSGVKLINIDAGKDIRVASLAKVKESSMNSEEDVLKKLEEELKEENVVIPPEDDQEEEEYSEEDDSFEGDNSLEEEDLMDDTKDLEELVSRALKDQEEQEDQEKQEEDQED
SIO_010081: CPHY_RS00035
subclass of: SO_0000673
so part of: CPHY_RS00035
location: 6932..9631
location: region:6932-9631:1
so has part: feature:6932-9631:1:exon

WP_012198040.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6932-9631:1:exon

CPHY_RS00040
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00040
old locus tag: Cphy_0007
so part of: sequence
location: 9911..10753
location: region:9911-10753:1
so has part: feature:9911-10753:1:exon
subclass of: SO_0000010

position:9911:1
position: 9911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10753:1
position: 10753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9911-10753:1:exon

CPHY_RS00040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00040
old locus tag: Cphy_0007
EC number: 4.2.1.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008392973.1
GO function: GO:0016829 - lyase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fumarate hydratase
translation: MRIVHTNAITKAIKEMCIEANLHLTEDVTNRLKKASLMENSDLGKKILGQLKENLEIAQKDLIPICQDTGMAVVFISIGQDVHLEGDYLETAINEGIRQGYEEGYLRKSVVNDPLLRENTKDNTPGIIHYSIIPGEDIEITVAPKGFGSENMSRVVMLKPSDGEEGIKKAVLETVKLAGPNACPPMVIGVGIGGTFEKCAILAKKALTRNLEESSKEEHIKRLEQELLKEINQTGIGPGGLGGNTTALGVNIEIYPTHIAGLPLAINICCHVNRHVKRVL
SIO_010081: CPHY_RS00040
subclass of: SO_0000673
so part of: CPHY_RS00040
location: 9911..10753
location: region:9911-10753:1
so has part: feature:9911-10753:1:exon

WP_012198041.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9911-10753:1:exon

CPHY_RS00045
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00045
old locus tag: Cphy_0008
so part of: sequence
location: 10807..11355
location: region:10807-11355:1
so has part: feature:10807-11355:1:exon
subclass of: SO_0000010

position:10807:1
position: 10807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11355:1
position: 11355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10807-11355:1:exon

CPHY_RS00045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00045
old locus tag: Cphy_0008
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008115906.1
GO function: GO:0016836 - hydro-lyase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fe-S-containing hydro-lyase
translation: MDKYITTPIDSSKVVGLKAGDYVYLSGKIYTARDAAHKRMFEALQQNKELPFDMTNQVIYYLGPTPAREGQVIGSAGPTTSSRMDKYTPTLLDLGLKGMIGKGKRNEDVIASMVRNKAVYFAAVGGAGALLSKCIKSSKVIAYEDLGTEAIRELWVENLPVIVVIDSNGNNFYELQMNSINS
SIO_010081: CPHY_RS00045
subclass of: SO_0000673
so part of: CPHY_RS00045
location: 10807..11355
location: region:10807-11355:1
so has part: feature:10807-11355:1:exon

WP_012198042.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10807-11355:1:exon

CPHY_RS00050
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00050
old locus tag: Cphy_0009
so part of: sequence
location: 11434..11871
location: region:11434-11871:1
so has part: feature:11434-11871:1:exon
subclass of: SO_0000010

position:11434:1
position: 11434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11871:1
position: 11871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11434-11871:1:exon

CPHY_RS00050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00050
old locus tag: Cphy_0009
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019162816.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rrf2 family transcriptional regulator
translation: MKISTKGRYALRLMLDLAINNTGEFITIKSIAGRQEISDKYLEQIITLLSRAGYVKSSRGAQGGYRLTKEPKEYTVGMILKLIEGSLAPVSCVEEEDNDCNRYGSCATLFVYQKINEAVNNVVDNITLEDLVERHRELGENNYVI
SIO_010081: CPHY_RS00050
subclass of: SO_0000673
so part of: CPHY_RS00050
location: 11434..11871
location: region:11434-11871:1
so has part: feature:11434-11871:1:exon

WP_012198043.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11434-11871:1:exon

CPHY_RS00055
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00055
old locus tag: Cphy_0010
so part of: sequence
location: 12344..13630
location: region:12344-13630:1
so has part: feature:12344-13630:1:exon
subclass of: SO_0000010

position:12344:1
position: 12344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13630:1
position: 13630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12344-13630:1:exon

CPHY_RS00055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00055
old locus tag: Cphy_0010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008418725.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase
translation: MSEQKRNLKFETLQLHVGQENADIATDARAVPIYQTTSYVFHNADHATARFNLTDAGNIYGRLTNPTQDVFEKRISALEGGVAALAVASGAAAITYTIMNLAQSGDHIVASKDIYGGSYNLLAHTLKEYGITTTFVDASDVENVKYAIKDNTKGVFIESLGNPNSNVLDIEAIAKIAHENKIPLVIDNTFATPYLLRPIEYGADIVVHSATKFIGGHGTSIGGVIIDSGKFDWEASGKFSSLTEPNPSYHGISFTKAVGEAAFVTKIRAILLRDTGAALSPFHAFMFLQGLETLSLRVERHVENALKVVEFLNKHPNIEKVNHPSLKESESHELYQKYFKKGAGSIFTIEIKGGEKEAKEFIDKLQIFSLLANVADVKSLVIHPASTTHSQMNEEELKNSGIKPNTVRLSIGTEHIDDILYDLEKALD
SIO_010081: CPHY_RS00055
subclass of: SO_0000673
so part of: CPHY_RS00055
location: 12344..13630
location: region:12344-13630:1
so has part: feature:12344-13630:1:exon

WP_012198044.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12344-13630:1:exon

CPHY_RS00060
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: cysK
locus tag: CPHY_RS00060
old locus tag: Cphy_0011
so part of: sequence
location: 13672..14604
location: region:13672-14604:1
so has part: feature:13672-14604:1:exon
subclass of: SO_0000010

position:13672:1
position: 13672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14604:1
position: 14604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13672-14604:1:exon

CPHY_RS00060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: cysK
locus tag: CPHY_RS00060
old locus tag: Cphy_0011
EC number: 2.5.1.47
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015394702.1
GO function: GO:0004124 - cysteine synthase activity [Evidence IEA]
GO process: GO:0006535 - cysteine biosynthetic process from serine [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cysteine synthase A
translation: MKIAKSLTDLIGNTPLLELSSFVKQQDLKANIIGKLEYFNPAGSVKDRVAKAMIEDAEERGLIKKGAVIIEPTSGNTGIGLASVATARGYRIILTMPETMSVERRNLLKAYGAELVLTDGSLGMKGAIAKAEELAKETPNSFIPGQFINPANPEVHRKTTGPEIWKDTDGKVDILVSGIGTGGTITGAGEYLKTQNPNIKVVAVEPASSPVLSKGVAGPHKIQGIGAGFIPDTLNTKVYDEIITVENEDAFTTGREIAKTEGLLVGISSGAAVYAAVQLAKRPENAGKNIVVILPDTGERYLSTPLFSEQ
SIO_010081: CPHY_RS00060
subclass of: SO_0000673
so part of: CPHY_RS00060
location: 13672..14604
location: region:13672-14604:1
so has part: feature:13672-14604:1:exon

WP_012198045.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13672-14604:1:exon

CPHY_RS00065
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00065
old locus tag: Cphy_R0001
so part of: sequence
location: 15146..15233
location: region:15146-15233:1
so has part: feature:15146-15233:1:exon
subclass of: SO_0000663

position:15146:1
position: 15146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15233:1
position: 15233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15146-15233:1:exon

CPHY_RS00065
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 357809
locus tag: CPHY_RS00065
old locus tag: Cphy_R0001
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:15180..15182,aa:Ser,seq:gct)
SIO_010081: CPHY_RS00065
subclass of: SO_0000673
so part of: CPHY_RS00065
location: 15146..15233
location: region:15146-15233:1
so has part: feature:15146-15233:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15146-15233:1:exon

CPHY_RS00070
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00070
old locus tag: Cphy_R0002
so part of: sequence
location: 15747..17276
location: region:15747-17276:1
so has part: feature:15747-17276:1:exon
subclass of: SO_0000573

position:15747:1
position: 15747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17276:1
position: 17276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15747-17276:1:exon

CPHY_RS00070
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 357809
locus tag: CPHY_RS00070
old locus tag: Cphy_R0002
product: 16S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00177
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: CPHY_RS00070
subclass of: SO_0000673
so part of: CPHY_RS00070
location: 15747..17276
location: region:15747-17276:1
so has part: feature:15747-17276:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15747-17276:1:exon

CPHY_RS00075
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: rrf
locus tag: CPHY_RS00075
old locus tag: Cphy_R0003
so part of: sequence
location: 17448..17565
location: region:17448-17565:1
so has part: feature:17448-17565:1:exon
subclass of: SO_0000573

position:17448:1
position: 17448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17565:1
position: 17565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17448-17565:1:exon

CPHY_RS00075
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 357809
gene: rrf
locus tag: CPHY_RS00075
old locus tag: Cphy_R0003
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: CPHY_RS00075
subclass of: SO_0000673
so part of: CPHY_RS00075
location: 17448..17565
location: region:17448-17565:1
so has part: feature:17448-17565:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17448-17565:1:exon

CPHY_RS00080
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00080
old locus tag: Cphy_R0004
so part of: sequence
location: 17910..20825
location: region:17910-20825:1
so has part: feature:17910-20825:1:exon
subclass of: SO_0000573

position:17910:1
position: 17910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20825:1
position: 20825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17910-20825:1:exon

CPHY_RS00080
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 357809
locus tag: CPHY_RS00080
old locus tag: Cphy_R0004
product: 23S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02541
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: CPHY_RS00080
subclass of: SO_0000673
so part of: CPHY_RS00080
location: 17910..20825
location: region:17910-20825:1
so has part: feature:17910-20825:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17910-20825:1:exon

CPHY_RS00085
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00085
old locus tag: Cphy_R0005
so part of: sequence
location: 20955..21028
location: region:20955-21028:1
so has part: feature:20955-21028:1:exon
subclass of: SO_0000663

position:20955:1
position: 20955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21028:1
position: 21028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20955-21028:1:exon

CPHY_RS00085
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 357809
locus tag: CPHY_RS00085
old locus tag: Cphy_R0005
product: tRNA-Asp
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:20989..20991,aa:Asp,seq:gtc)
SIO_010081: CPHY_RS00085
subclass of: SO_0000673
so part of: CPHY_RS00085
location: 20955..21028
location: region:20955-21028:1
so has part: feature:20955-21028:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20955-21028:1:exon

CPHY_RS00090
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00090
old locus tag: Cphy_R0006
so part of: sequence
location: 21063..21135
location: region:21063-21135:1
so has part: feature:21063-21135:1:exon
subclass of: SO_0000663

position:21063:1
position: 21063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21135:1
position: 21135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21063-21135:1:exon

CPHY_RS00090
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 357809
locus tag: CPHY_RS00090
old locus tag: Cphy_R0006
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:21096..21098,aa:Val,seq:tac)
SIO_010081: CPHY_RS00090
subclass of: SO_0000673
so part of: CPHY_RS00090
location: 21063..21135
location: region:21063-21135:1
so has part: feature:21063-21135:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21063-21135:1:exon

CPHY_RS00095
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00095
old locus tag: Cphy_R0007
so part of: sequence
location: 21189..21261
location: region:21189-21261:1
so has part: feature:21189-21261:1:exon
subclass of: SO_0000663

position:21189:1
position: 21189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21261:1
position: 21261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21189-21261:1:exon

CPHY_RS00095
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 357809
locus tag: CPHY_RS00095
old locus tag: Cphy_R0007
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:21222..21224,aa:Thr,seq:tgt)
SIO_010081: CPHY_RS00095
subclass of: SO_0000673
so part of: CPHY_RS00095
location: 21189..21261
location: region:21189-21261:1
so has part: feature:21189-21261:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21189-21261:1:exon

CPHY_RS00100
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00100
old locus tag: Cphy_R0008
so part of: sequence
location: 21271..21352
location: region:21271-21352:1
so has part: feature:21271-21352:1:exon
subclass of: SO_0000663

position:21271:1
position: 21271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21352:1
position: 21352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21271-21352:1:exon

CPHY_RS00100
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 357809
locus tag: CPHY_RS00100
old locus tag: Cphy_R0008
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:21305..21307,aa:Tyr,seq:gta)
SIO_010081: CPHY_RS00100
subclass of: SO_0000673
so part of: CPHY_RS00100
location: 21271..21352
location: region:21271-21352:1
so has part: feature:21271-21352:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21271-21352:1:exon

CPHY_RS00105
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00105
old locus tag: Cphy_R0009
so part of: sequence
location: 21414..21487
location: region:21414-21487:1
so has part: feature:21414-21487:1:exon
subclass of: SO_0000663

position:21414:1
position: 21414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21487:1
position: 21487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21414-21487:1:exon

CPHY_RS00105
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 357809
locus tag: CPHY_RS00105
old locus tag: Cphy_R0009
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:21448..21450,aa:Met,seq:cat)
SIO_010081: CPHY_RS00105
subclass of: SO_0000673
so part of: CPHY_RS00105
location: 21414..21487
location: region:21414-21487:1
so has part: feature:21414-21487:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21414-21487:1:exon

CPHY_RS00110
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00110
old locus tag: Cphy_R0010
so part of: sequence
location: 21533..21605
location: region:21533-21605:1
so has part: feature:21533-21605:1:exon
subclass of: SO_0000663

position:21533:1
position: 21533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21605:1
position: 21605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21533-21605:1:exon

CPHY_RS00110
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 357809
locus tag: CPHY_RS00110
old locus tag: Cphy_R0010
product: tRNA-Phe
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:21566..21568,aa:Phe,seq:gaa)
SIO_010081: CPHY_RS00110
subclass of: SO_0000673
so part of: CPHY_RS00110
location: 21533..21605
location: region:21533-21605:1
so has part: feature:21533-21605:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21533-21605:1:exon

CPHY_RS00115
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00115
old locus tag: Cphy_R0011
so part of: sequence
location: 21653..21725
location: region:21653-21725:1
so has part: feature:21653-21725:1:exon
subclass of: SO_0000663

position:21653:1
position: 21653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21725:1
position: 21725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21653-21725:1:exon

CPHY_RS00115
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 357809
locus tag: CPHY_RS00115
old locus tag: Cphy_R0011
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:21686..21688,aa:Lys,seq:ttt)
SIO_010081: CPHY_RS00115
subclass of: SO_0000673
so part of: CPHY_RS00115
location: 21653..21725
location: region:21653-21725:1
so has part: feature:21653-21725:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21653-21725:1:exon

CPHY_RS00120
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00120
old locus tag: Cphy_0012
so part of: sequence
location: 22337..23074
location: region:22337-23074:1
so has part: feature:22337-23074:1:exon
subclass of: SO_0000010

position:22337:1
position: 22337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23074:1
position: 23074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22337-23074:1:exon

CPHY_RS00120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00120
old locus tag: Cphy_0012
EC number: 2.3.1.286
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005210659.1
GO function: GO:0051287 - NAD binding [Evidence IEA]; GO:0070403 - NAD+ binding [Evidence IEA]; GO:0034979 - NAD-dependent protein deacetylase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD-dependent protein deacylase
translation: MTKETEQLIEIVKESNNIVFFGGAGVSTESGIPDFRSENGLYTTGQGKKYSPEQLLSHSFFMRHTHDFFAYYKSHMIYKEAKPNPAHLALAKLEELGKLSAVITQNIDSLHQVAGSQTVYELHGSSNRNYCMKCRKSFSLDQIMKMDTVPICTNCGGVVKPDVVLYEEELKQATIQKAIDAILKADTMIVGGTSLVVWPAASLIEYFQGKNLVLINKSETTYDTMASLVIHDSIGEVLDSVIRTL
SIO_010081: CPHY_RS00120
subclass of: SO_0000673
so part of: CPHY_RS00120
location: 22337..23074
location: region:22337-23074:1
so has part: feature:22337-23074:1:exon

WP_012198046.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22337-23074:1:exon

CPHY_RS00125
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: fsa
locus tag: CPHY_RS00125
old locus tag: Cphy_0013
so part of: sequence
location: 23329..23982
location: region:23329-23982:1
so has part: feature:23329-23982:1:exon
subclass of: SO_0000010

position:23329:1
position: 23329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23982:1
position: 23982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23329-23982:1:exon

CPHY_RS00125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: fsa
locus tag: CPHY_RS00125
old locus tag: Cphy_0013
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198047.1
GO function: GO:0016832 - aldehyde-lyase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fructose-6-phosphate aldolase
translation: MKFFIDTANVEEIKKANDMGVICGVTTNPSLIAKEGRDFKEVITEITNIVDGPISGEVKATTEDAESMIKEGREIAKIHPNMVVKIPMTVEGLKATKVLSQEGIKTNVTLVFSANQALLAARAGATYVSPFLGRLDDISTPGIDLIRTISDIFEIYNLPTEIIAASVRNPVHITDCALAGAHIATVPYSVIVQCTKHPLTDAGIEKFKADYRAVFGE
SIO_010081: CPHY_RS00125
subclass of: SO_0000673
so part of: CPHY_RS00125
location: 23329..23982
location: region:23329-23982:1
so has part: feature:23329-23982:1:exon

WP_012198047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23329-23982:1:exon

CPHY_RS00130
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: tkt
locus tag: CPHY_RS00130
old locus tag: Cphy_0014
so part of: sequence
location: 24186..26168
location: region:24186-26168:1
so has part: feature:24186-26168:1:exon
subclass of: SO_0000010

position:24186:1
position: 24186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26168:1
position: 26168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24186-26168:1:exon

CPHY_RS00130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: tkt
locus tag: CPHY_RS00130
old locus tag: Cphy_0014
EC number: 2.2.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007706671.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004802 - transketolase activity [Evidence IEA]
GO process: GO:0006098 - pentose-phosphate shunt [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transketolase
translation: MNNIDTMSINAIRVLAADAVQKAKSGHPGLPLGCAAIAYDIWANEMKHNPANPDWANRDRFILSGGHGSTLLYSLLHLFGYGLTKEDMMQFRQLDSLTPGHPEYRHTKGVEATTGPLGAGMAMAVGMAMSEEHLAAKFNKENYPVVDHYTYVLGGDGCMMEGISYEAFSLAGTLGLSKLIVFYDSNKISIEGDTDIAFTEDVLKRFEAFHFQTIVVEDGNNIEEISNAVKAAKADTNRPSLILCKTQIGYGCPAKQGKASAHGEPLGDDNVVALKENIGWPSTEPFFVPEEVYAHYNEIAAKKAEDETAWNKMFAEYCSAYPEMKEAWEKEFDLDVAKELIDNEEFWSFEDKPEATRNLSGVILNKLKNYVPSLIGGAADLAPSTKTYLNNEGDFSKDNRLGRNLHFGVRELAMAAIGNGMVLHGLRAYVSTFFVFSDYMKPMARLSSLMRIPTTFVWTHDSIGVGEDGPTHEPIEQLAMYRAMPNFHIFRPADATETIAAWYSAVTSKETPTALVLTRQNLPQLAGSSKEALKGAYVLEDSNKETPDAIIIATGSEVELAVAAKAELLKEGVDVRVVSMPCMDIFEEQSKEYKESILPSAVRKRVAVEALIGYGWEKYVGLDGTIVSMNGFGASAPAGTLFKKFGFTTENVVASVKSIL
SIO_010081: CPHY_RS00130
subclass of: SO_0000673
so part of: CPHY_RS00130
location: 24186..26168
location: region:24186-26168:1
so has part: feature:24186-26168:1:exon

WP_012198048.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24186-26168:1:exon

CPHY_RS00135
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00135
old locus tag: Cphy_0015
so part of: sequence
location: 26532..27218
location: region:26532-27218:1
so has part: feature:26532-27218:1:exon
subclass of: SO_0000010

position:26532:1
position: 26532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27218:1
position: 27218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26532-27218:1:exon

CPHY_RS00135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00135
old locus tag: Cphy_0015
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013121510.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator transcription factor
translation: MAKILIVEDEVKIARFVELELKYEGYTVDIANDGRSGLEKALKSDIDLVLLDVMLPGLSGIEVCRRIRMESQVPIIMLTAKDDVTDKVAGLDMGADDYMTKPFAIEELLARIRVALSRHSKSSAEAKQDVLTHGELKLNLTSHSANYGEEDLTLTKKEYELLEYLMRNKNIALTREQLLNNVWDYEYFGDTNVVDVYIRYLRQKIDDKYGVHLISTVRGVGYIIRDEK
SIO_010081: CPHY_RS00135
subclass of: SO_0000673
so part of: CPHY_RS00135
location: 26532..27218
location: region:26532-27218:1
so has part: feature:26532-27218:1:exon

WP_012198049.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26532-27218:1:exon

CPHY_RS20435
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS20435
old locus tag: Cphy_0016
so part of: sequence
location: 27208..28647
location: region:27208-28647:1
so has part: feature:27208-28647:1:exon
subclass of: SO_0000010

position:27208:1
position: 27208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28647:1
position: 28647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27208-28647:1:exon

CPHY_RS20435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS20435
old locus tag: Cphy_0016
inference: COORDINATES: protein motif:HMM:NF014567.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAMP domain-containing sensor histidine kinase
translation: MKNRAVEKIRSVLRKVILPYRKKKEAMLGGIRLSITNRIAMNYMKLLIINGFLFFFVFSILYLNIEKGRYEDLAEEIVVNLENDGDAFLTVVNPYSKLGVNMILYEVDTGREVYNDVTYDVKNYRRIFRSIHYTKSSDTHRLILDDDMEFVQGGTLYRAQFFYNMTKDYNRMWSLLWNMLILYVIIVFFIIQEGKKNNIKLLEPIQSMSATVNRLTVSNLHSERLNVAGTKNELKDLAIVFNNMLDRLETSYDRQKQFVSDASHELRTPIAVIQGYINMLSRWGSKDQEILEESIEAIKNEAKAMQDLVEKLLFLSRHDKKTLKLEKKIFNMRPIVEEMVKETKLVTANRVIEAPYLEDVNVYGDKQALKQAIRVFIDNAVKYTQDGDTIRIYCRNIRGDCMIGVEDTGIGMTRKDMDNIFNRFYRSDHVRDRKIEGHGLGLSIAKLIIMAHTGRIKVRSQFTKGTSFIVTIPRIRYDS
SIO_010081: CPHY_RS20435
subclass of: SO_0000673
so part of: CPHY_RS20435
location: 27208..28647
location: region:27208-28647:1
so has part: feature:27208-28647:1:exon

WP_012198050.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27208-28647:1:exon

CPHY_RS00145
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00145
old locus tag: Cphy_0017
so part of: sequence
location: complement(29061..30842)
location: region:29061-30842:-1
so has part: feature:29061-30842:-1:exon
subclass of: SO_0000010

position:29061:-1
position: 29061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30842:-1
position: 30842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29061-30842:-1:exon

CPHY_RS00145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00145
old locus tag: Cphy_0017
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009252907.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MAVNAIKEDESLHVASKKNTLLRLYRYLLAYKKSIAVVLLIMCGTITISLINPIIIEKAIDKYIKGGNINGLIKLGIFALVLNITLVILVKLRMYIMSKLSNSVLVTIRQELYTHIQTLSFKFFDSRPTGKILARIMGDVNSLKDVLSNSVTTLIPDFITICSVVIIMFVKNYKLALASLCSFPLMAFGVWFVQTRAHKRWQIHKKKSSNVNAFIHEDVSGMRIIQSFGAEDETEEEFDELLKEHRDSFMSAVRFADAFGPIVDICWALATLFLFLVGVNLIGKDPSVEVGTIVAFGSYISMFWHPLLNLSNFYNQLITNITGAERIFEILDTKPDVNDAKDVHTLPNVRGEVDFKHVSFSYDEDTNVLRDVSFHVKPGETIALVGPTGAGKTTIINLISRFYDIQKGTITIDGYDLTKVSIESLREQMGVMTQDNFLFTGTIKENISYGKLDATDEEIITAAKAVNAHEFIMKMEKGYDTELKERGAGLSIGQKQLLAFARTMVSKPKILILDEATSSIDTHTELLVQKGIEALLKGRTSFVIAHRLSTIQKADRIFVIDNGGIIESGSAAELLERKGAYYNLYMAQFKNIA
SIO_010081: CPHY_RS00145
subclass of: SO_0000673
so part of: CPHY_RS00145
location: complement(29061..30842)
location: region:29061-30842:-1
so has part: feature:29061-30842:-1:exon

WP_012198051.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29061-30842:-1:exon

CPHY_RS00150
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00150
old locus tag: Cphy_0018
so part of: sequence
location: complement(30987..32732)
location: region:30987-32732:-1
so has part: feature:30987-32732:-1:exon
subclass of: SO_0000010

position:30987:-1
position: 30987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32732:-1
position: 32732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30987-32732:-1:exon

CPHY_RS00150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00150
old locus tag: Cphy_0018
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009252906.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MKISHYLKKYWYRYAFAIFCIFVTVGLDMLNPQVTMRIIDNVIGEGQRDQLAPLLVVVLLIGVGRCIFGYLKEYNFDSVSSKISADLRSKLFRHIQTLSVDFFDKNNTGELMSRVKDDVDRIWDAFNYVSMLLIEVVIHTSIILYCMFHLNKKLFLVPVIAMPLVAILAVLLERKLGGIYEEISEQNATLNTIAQENLAGVRTVKAFAREKFEIQKFLSHNKRYYDLNMSQSKVLTRYQPLFQLITRALPLIIVIYGGYLTIQGEITLGVLAAFVEYSNNITWPMEMIGWLTNAAASAVASNKKIKKIFAENPSIQNPEKPVILDEITGNIEFRNVDFEIDGKEILHNINFHLPAGKTIGIMGATGAGKTSIINVLQRFYDVKEGEVLLDGVNIKELNLTQLRKSVSLVMQDVFLFSDTINENVKLGKKTSIEDDEVIHALKHAQASDFIEQMEEQYDTIIGERGVGLSGGQKQRISIGRAIAKKAPILVLDDSTSALDMETEHQIQETLNSLNGTTKIIIAHRISAVRNADEIIFLENGTIAERGTHNDLLKKEGLYYETYMAQYGDYLETSKEVIACNY
SIO_010081: CPHY_RS00150
subclass of: SO_0000673
so part of: CPHY_RS00150
location: complement(30987..32732)
location: region:30987-32732:-1
so has part: feature:30987-32732:-1:exon

WP_012198052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30987-32732:-1:exon

CPHY_RS00155
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00155
old locus tag: Cphy_0019
so part of: sequence
location: 33494..33748
location: region:33494-33748:1
so has part: feature:33494-33748:1:exon
subclass of: SO_0000010

position:33494:1
position: 33494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33748:1
position: 33748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33494-33748:1:exon

CPHY_RS00155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00155
old locus tag: Cphy_0019
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQNAPFIRRPYGKLLISYIIETKSVSIIEGIIETKSRKHVSIIIGIIETKSRKHVSIIIGIIETKSRKHVSIIEGIIEMESMVQ
SIO_010081: CPHY_RS00155
subclass of: SO_0000673
so part of: CPHY_RS00155
location: 33494..33748
location: region:33494-33748:1
so has part: feature:33494-33748:1:exon

WP_198301328.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33494-33748:1:exon

CPHY_RS00160
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00160
old locus tag: Cphy_0020
pseudo: true
so part of: sequence
location: 33777..>34391
location: region:33777-34391:1
so has part: feature:33777-34391:1:exon
subclass of: SO_0000010

position:33777:1
position: 33777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34391:1
position: 34391
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33777-34391:1:exon

CPHY_RS00160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00160
old locus tag: Cphy_0020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004607324.1
GO process: GO:0015969 - guanosine tetraphosphate metabolic process [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: GTP pyrophosphokinase family protein
SIO_010081: CPHY_RS00160
subclass of: SO_0000673
so part of: CPHY_RS00160
location: 33777..>34391
location: region:33777-34391:1
so has part: feature:33777-34391:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:33777-34391:1:exon

CPHY_RS00165
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00165
old locus tag: Cphy_0021
so part of: sequence
location: complement(34946..35857)
location: region:34946-35857:-1
so has part: feature:34946-35857:-1:exon
subclass of: SO_0000010

position:34946:-1
position: 34946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35857:-1
position: 35857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34946-35857:-1:exon

CPHY_RS00165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00165
old locus tag: Cphy_0021
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009253161.1
GO function: GO:0003676 - nucleic acid binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S1 RNA-binding domain-containing protein
translation: MDETNLTMDDFKTELEHSLKRLTEGDLVKGTVIGISDTEVTVDLSYSSEGIIKLEELSNDPRFSIKADVTIGEEITAMILSEDKEGNLLLSKKKADDILSWDKLKTMMTERTVTTVKVSNAVNGGVVTYLEGIRAFIPASMLSLSYVEDVSTFVGKVLKVIVITADKEANKLVLSAKEVLREEEAKEKSHKISQVQKGIVTTGIVDKLMPFGAFVSIGEGLSGLVHISQICGKRIKSPAEVLKEGQEVKVKVLDVKDGKISLSIKAVSDAEEVHEDAVDIPAEYSTGEQVTTGLGDLLKNFKF
SIO_010081: CPHY_RS00165
subclass of: SO_0000673
so part of: CPHY_RS00165
location: complement(34946..35857)
location: region:34946-35857:-1
so has part: feature:34946-35857:-1:exon

WP_012198055.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34946-35857:-1:exon

CPHY_RS00170
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00170
old locus tag: Cphy_0022
so part of: sequence
location: 36084..36809
location: region:36084-36809:1
so has part: feature:36084-36809:1:exon
subclass of: SO_0000010

position:36084:1
position: 36084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36809:1
position: 36809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36084-36809:1:exon

CPHY_RS00170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00170
old locus tag: Cphy_0022
inference: COORDINATES: protein motif:HMM:NF012514.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NUDIX hydrolase
translation: MRAFVSDINKFLGNGKCNEEGKSLEKFLTEYDPNKYQNPSVTADFLVFQKPENSYDLQKDLKLLLIQRKNHPCIGWWALPGGFVEIHEDIDKAAARELLEETGLSDIPMEQIYTFGKQDRDPRTRIVTVAYLALLESNQKVEAGDDAAEAEWFSLSIEKEYEELLEEGNAILKHKRKRERYHIRVTCEKNQDIKAEATVDYFCNIDTLLLQEDYEVICSNGISFDHPAFILRAYQLLRKRM
SIO_010081: CPHY_RS00170
subclass of: SO_0000673
so part of: CPHY_RS00170
location: 36084..36809
location: region:36084-36809:1
so has part: feature:36084-36809:1:exon

WP_041703002.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36084-36809:1:exon

CPHY_RS00175
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00175
old locus tag: Cphy_0023
so part of: sequence
location: complement(36983..37717)
location: region:36983-37717:-1
so has part: feature:36983-37717:-1:exon
subclass of: SO_0000010

position:36983:-1
position: 36983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37717:-1
position: 37717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36983-37717:-1:exon

CPHY_RS00175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00175
old locus tag: Cphy_0023
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006856491.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNQELFQISCSQVIDQALQENGIGTLSEKTIHSVLKHYYSPDTACHEQKVKNFVADILIENHIIEIQTRQFHKLRRKLEVYLPEYEVTIVYPVAHTKWLSWVNEETGEVSKPRKSPKTGVAYQIFPELYQIKDYLKDPNLHLNIISMDVEEYRLLNGWSKDKKKGSTRNDGIPVALFDEMVIVTKDDYNKLLPANLPKQFTTKDYKKAAGVPQRIATTALNILYHMNTIDRVGKQGNSFLYEVI
SIO_010081: CPHY_RS00175
subclass of: SO_0000673
so part of: CPHY_RS00175
location: complement(36983..37717)
location: region:36983-37717:-1
so has part: feature:36983-37717:-1:exon

WP_012198057.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36983-37717:-1:exon

CPHY_RS00180
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00180
old locus tag: Cphy_0024
so part of: sequence
location: 38095..39390
location: region:38095-39390:1
so has part: feature:38095-39390:1:exon
subclass of: SO_0000010

position:38095:1
position: 38095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39390:1
position: 39390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38095-39390:1:exon

CPHY_RS00180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00180
old locus tag: Cphy_0024
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015521551.1
GO function: GO:0004177 - aminopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M18 family aminopeptidase
translation: MREKEIAGELLSYIKKSASPYHAVLEGITMLDEAGFIELDFRKTFCLKAGGKYYTKPFGTTLFAFTIGNQVTNTQQFRLASAHTDHPCLHVKPTAELTSKGYLRVNTEIYGGPILNTWLDRPLSIAGRVALKSENPFAPETRVIRVDKPFLTIPNLAIHMNKEVNKGVELMRQTDMLPLMGVLNETLNEKSYFIEFLAKELSVEVSDILDFDLYVFCAEDGLLLGMNEEFIQSPRLDNLTSCHALLRGIIDGNREDGINVIGLFDNEEIGSETKQGADSALFSMFLEKIYQALGYDRAALNDSILSSFLISMDVAHALHPSKIDKYDPVNYALMNDGVVFKISGNQRYTFDTEAIASMVMLCDKYNIPYKKFVNHSDVIGGGTMGPIISSWLPMKTVDIGIPMLAMHSARELMGTKDQKALVDLATAFFME
SIO_010081: CPHY_RS00180
subclass of: SO_0000673
so part of: CPHY_RS00180
location: 38095..39390
location: region:38095-39390:1
so has part: feature:38095-39390:1:exon

WP_012198058.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38095-39390:1:exon

misc_binding
type: Miscellaneous Binding Site
subclass of: SO_0000409
RO_0002162: 357809
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00230
inference: COORDINATES: profile:INFERNAL:1.1.4
note: T-box leader; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: tRNA
so part of: sequence
location: 40126..40381
location: region:40126-40381:1
so has part: feature:40126-40381:1:region

position:40126:1
position: 40126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40381:1
position: 40381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40126-40381:1:region

CPHY_RS00185
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: metG
locus tag: CPHY_RS00185
old locus tag: Cphy_0025
so part of: sequence
location: 40543..42537
location: region:40543-42537:1
so has part: feature:40543-42537:1:exon
subclass of: SO_0000010

position:40543:1
position: 40543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42537:1
position: 42537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40543-42537:1:exon

CPHY_RS00185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: metG
locus tag: CPHY_RS00185
old locus tag: Cphy_0025
EC number: 6.1.1.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009203993.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000049 - tRNA binding [Evidence IEA]
GO process: GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methionine--tRNA ligase
translation: MSKKPYYITTAIAYTSGKPHIGNTYEIVLADSIARFKRLEGYEVFFQTGTDEHGQKIEEKAAEVGVSPKEFVDKVAGGIKDIWDLMNSSYDKFIRTTDVDHEKQVQKIFKKLYDQGDIYKGNYEGMYCTPCESFFTASQLVNGKCPDCGRECQPAKEEAYFLKLSNYTGRLIDHINTHPEFIQPESRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPKHVIYVWIDALSNYITGIGYDCDGNSTEQFNKFWPADLHLIGKDILRFHTIYWPIMLMALDLPLPKQVFGHPWLLQTDPNAKDGSGVKMSKSRGNVLYADDLVEFFGVDAVRYFVLHEMPFDNDGVINWELMVDRMNSDLANTLGNLVNRTISMSNKYFEGVVNKTDVTEPVDADLIEVVTKTRDKVVAKMANLRVADAISEIFTLFKRCNKYIDETMPWALAKEEEKKARLENVLYNLVESICIGANLLEPFLPESAEKILAQLNAKKRNIEELATFGLYDNGTKVTDQPQILFARLDLKEVLAKVEEKHASEVEETAKVEEVKQEETVIEIPAKDEITYDDFAKLQFQVGEIIACEEVKKSKKLLCSQVKIGNQVKQIVSGIKAHYTAEEMVGKKVMVLVNLKPATLAGIVSEGMLLCAEDENGVLALMTPEKPMPSGAEIC
SIO_010081: CPHY_RS00185
subclass of: SO_0000673
so part of: CPHY_RS00185
location: 40543..42537
location: region:40543-42537:1
so has part: feature:40543-42537:1:exon

WP_012198059.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40543-42537:1:exon

CPHY_RS00190
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00190
old locus tag: Cphy_0026
so part of: sequence
location: complement(42711..42926)
location: region:42711-42926:-1
so has part: feature:42711-42926:-1:exon
subclass of: SO_0000010

position:42711:-1
position: 42711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42926:-1
position: 42926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42711-42926:-1:exon

CPHY_RS00190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00190
old locus tag: Cphy_0026
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008120902.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YaaL family protein
translation: MKLFKKNQDEFNKELLKEIANTQKELESAYSNFENVVDPDLIDSCIYQVNAIQHRYKFLLKQVKNSAPYSV
SIO_010081: CPHY_RS00190
subclass of: SO_0000673
so part of: CPHY_RS00190
location: complement(42711..42926)
location: region:42711-42926:-1
so has part: feature:42711-42926:-1:exon

WP_012198060.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42711-42926:-1:exon

CPHY_RS00195
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00195
old locus tag: Cphy_0027
so part of: sequence
location: 43272..43535
location: region:43272-43535:1
so has part: feature:43272-43535:1:exon
subclass of: SO_0000010

position:43272:1
position: 43272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43535:1
position: 43535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43272-43535:1:exon

CPHY_RS00195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00195
old locus tag: Cphy_0027
inference: COORDINATES: protein motif:HMM:NF019085.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pro-sigmaK processing inhibitor BofA family protein
translation: MKQYISYLLFALAGMLFAWYLYVNHKKWIGTVIVRAVLSIVVIYLINTVALNFGIVTLVGVNIVSIGVTAFLGVPGLLLLYGASLFF
SIO_010081: CPHY_RS00195
subclass of: SO_0000673
so part of: CPHY_RS00195
location: 43272..43535
location: region:43272-43535:1
so has part: feature:43272-43535:1:exon

WP_012198061.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43272-43535:1:exon

CPHY_RS00200
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00200
so part of: sequence
location: 43750..44937
location: region:43750-44937:1
so has part: feature:43750-44937:1:exon
subclass of: SO_0000010

position:43750:1
position: 43750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44937:1
position: 44937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43750-44937:1:exon

CPHY_RS00200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010075300.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MDWQKCMNQALDYIENNLSCDIDYSVTAKIMNCSEWEFRRIFSFFAQIPLSEYIRRRRLTMAAIDIKNGEKIIDVAIRYGYDSQAAFSRAFSRLHGIAPSLARDEGAMLKIFPRLTFKLILMEGNSMEKNPGHRTNIIGAGEVGCAVSVDGDKNNIRKMNGSFWDTKGNEVIGTTALPLYGAFVSEEKCRLFGNVSGKKLLEICCGTGHSLQYHGDRNASELWGIDISEKQIEKAKQHLSSKGYLAKLFCSPMEEDCGIPVDYFDYVYSIYGVGWSTDLAGTFCRIASYLKKDGVFIFSWSHPIHKCVAFENDSLSFKKCYFDESWYSVSLDGGAISLSDRKLSTYINALTKAGFIIDEMIEESDDEIIQLKKDSDFAKKAKMLPVTFVIKARKL
SIO_010081: CPHY_RS00200
subclass of: SO_0000673
so part of: CPHY_RS00200
location: 43750..44937
location: region:43750-44937:1
so has part: feature:43750-44937:1:exon

WP_041703011.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43750-44937:1:exon

CPHY_RS00205
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00205
old locus tag: Cphy_0030
so part of: sequence
location: 44956..45768
location: region:44956-45768:1
so has part: feature:44956-45768:1:exon
subclass of: SO_0000010

position:44956:1
position: 44956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45768:1
position: 45768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44956-45768:1:exon

CPHY_RS00205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00205
old locus tag: Cphy_0030
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDFLHRVNELIRKSDHMEILDSESYFRKIYYDNHNEVILEHTVYKEDLYTSYQMYQLTYDTHNNIVCKESIYILRELERSHGFTYYEYEYDENGNVLSKVTLNDNHKRNELINYYYRNNLLIKKEIWEKKLQRYLTDPITDEVLCYYIHTYHYGEDMKLLLETVTFPTGEVCYYVDYHDNEIYPDGKIINPAKSEYAWMVLSKDVYIEITEKYYTPEVLKEIVEYVRATYESTSVILWVRGIWEDCYSNPLYELYRYYLDNLDISINYTY
SIO_010081: CPHY_RS00205
subclass of: SO_0000673
so part of: CPHY_RS00205
location: 44956..45768
location: region:44956-45768:1
so has part: feature:44956-45768:1:exon

WP_012198063.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44956-45768:1:exon

CPHY_RS00210
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00210
old locus tag: Cphy_0031
so part of: sequence
location: 46157..47131
location: region:46157-47131:1
so has part: feature:46157-47131:1:exon
subclass of: SO_0000010

position:46157:1
position: 46157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47131:1
position: 47131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46157-47131:1:exon

CPHY_RS00210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00210
old locus tag: Cphy_0031
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKITVAILDRQEDYARLLMEFMNQQADYGFFTVAFTEEELYRDFEKDHKVDILLYAEEFREGMITNLSKVSYCLCEDTSFSNESIFKYQSASNIMNLLLERYIDLGYTWKPVTKNTGKQKVIGVFSPCYEIRQSHIAIILAKYLATKEKCVYLCLQPIFPSEILGYGEHSSLSDVIYLLKQDGANKSVKIKQCLEQVGELNCILGTYYFAEIYELTFDEIINLITELKENLLYETIVIDFSLYTSLALDLLKVCDVLLMPQLAGEARQCFSIAFEEQLKRTGQDQLLEKLVQIVIPYEEQKQKSIRLDKQKEAEYQQILKELQF
SIO_010081: CPHY_RS00210
subclass of: SO_0000673
so part of: CPHY_RS00210
location: 46157..47131
location: region:46157-47131:1
so has part: feature:46157-47131:1:exon

WP_012198064.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46157-47131:1:exon

CPHY_RS00215
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00215
old locus tag: Cphy_0032
so part of: sequence
location: 47419..48633
location: region:47419-48633:1
so has part: feature:47419-48633:1:exon
subclass of: SO_0000010

position:47419:1
position: 47419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48633:1
position: 48633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47419-48633:1:exon

CPHY_RS00215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00215
old locus tag: Cphy_0032
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003517058.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CpaF family protein
translation: MEQRKQELQEQILAGIDMTRELTEEELFDHIDEAIKVRGKEEYISITEKQRLRIEIFNSIRRLDVLQELVEDTSITEIMINGAKEIFVERDGKLMKWEKEFESDRKLEDVIQTIVAGANRIINEASPIVDARLKDGSRVNIVLPPIAIGGPTVTIRKFPKETMTMEKLVTIGSLTEEAAEFLKKLVIAGYNIFVSGGTGSGKTTFLNALSNYVPSEERIITIEDSAELQIRNIPNLVRLEVRNANVEGKNEISIRDLIKSSLRMRPDRIIVGEVRDASSIDMLQALNTGHNGMSTGHSNSPTDMLSRLETMVLLGADIPLLAVRKQIASAIDIVIHLGRLRDKTRKVLEVVEVLECVDGEIEVNPLFLFSEEGETKEGKVLGELKKTDNSLLHVQKLLRAGLSL
SIO_010081: CPHY_RS00215
subclass of: SO_0000673
so part of: CPHY_RS00215
location: 47419..48633
location: region:47419-48633:1
so has part: feature:47419-48633:1:exon

WP_012198065.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47419-48633:1:exon

CPHY_RS00220
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00220
old locus tag: Cphy_0033
so part of: sequence
location: 48895..49467
location: region:48895-49467:1
so has part: feature:48895-49467:1:exon
subclass of: SO_0000010

position:48895:1
position: 48895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49467:1
position: 49467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48895-49467:1:exon

CPHY_RS00220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00220
old locus tag: Cphy_0033
inference: COORDINATES: protein motif:HMM:NF012694.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II secretion system F family protein
translation: MAEDRKKKLNTEFLDGIHSLSVALEAGYSVENAFKAAIKDLGLMYSKEALIMKEFQCIVSQINHNIPIENAIGEFANRSKLEDVECFSEVFKTAKRTGGDLVAIIKMTGKTIGEKVEVMREIETLITAKKMEANIMKLVPFGILGYMLLGSPQFLKPLYHNLFGIIFMTILLGIYLFLTKLVDKIIAIRV
SIO_010081: CPHY_RS00220
subclass of: SO_0000673
so part of: CPHY_RS00220
location: 48895..49467
location: region:48895-49467:1
so has part: feature:48895-49467:1:exon

WP_157668631.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48895-49467:1:exon

CPHY_RS00225
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00225
old locus tag: Cphy_0034
so part of: sequence
location: 49484..50941
location: region:49484-50941:1
so has part: feature:49484-50941:1:exon
subclass of: SO_0000010

position:49484:1
position: 49484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50941:1
position: 50941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49484-50941:1:exon

CPHY_RS00225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00225
old locus tag: Cphy_0034
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTYAILFVLILILVLFFLSKSYDKEFIDGLDSKEHPLKRLYSFVGFCWFQIIHRPQKSNRKETASLYQKGALMTFVFLLFLIILLINEQKAPKEILQDGYKIERPEVGEGSKTYHLGYQLGAEEEDLTFEITEKQVKKEDRKKMFQAAEAALYKIILNKNIDFNQVTSDLKFPKQFGSPALSVSYKTGQSDYLWEDGSIRGEGAPKEGIPTSINVTLRYFEDTYEFQINITILPPIEPELSIKEIMELEVKRREEENREEEMVTLPSVVLGDQVLWKPIKNNSSIPLLLIGILVMVCIPFFIEQKKREREQQKQEQLLLDYPEIMMKYTLLLSAGMTTYGAWERIVKDYNTRRERELGGTRRNKKKLSKSKSMKSMRYAYEEMIITKNEIDLGVSESVAYERFGRRCKLLSYLRFSTIIVQNMKKGNKGMIPMLEAESVQALLDRKEQAKRLGERASTKMLMPMMGMLCIVIAILMVPAMMSMGM
SIO_010081: CPHY_RS00225
subclass of: SO_0000673
so part of: CPHY_RS00225
location: 49484..50941
location: region:49484-50941:1
so has part: feature:49484-50941:1:exon

WP_012198067.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49484-50941:1:exon

CPHY_RS00230
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00230
old locus tag: Cphy_0035
so part of: sequence
location: 51057..51260
location: region:51057-51260:1
so has part: feature:51057-51260:1:exon
subclass of: SO_0000010

position:51057:1
position: 51057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51260:1
position: 51260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51057-51260:1:exon

CPHY_RS00230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00230
old locus tag: Cphy_0035
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009256517.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Flp1 family type IVb pilin
translation: MRKVKSKDKNILRNNQGFGVVEVILIIVVVIALIIIFQEQITSIFNRAMGALKASTDSYFNNITPAP
SIO_010081: CPHY_RS00230
subclass of: SO_0000673
so part of: CPHY_RS00230
location: 51057..51260
location: region:51057-51260:1
so has part: feature:51057-51260:1:exon

WP_012198068.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51057-51260:1:exon

CPHY_RS00235
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00235
old locus tag: Cphy_0036
so part of: sequence
location: 51273..53756
location: region:51273-53756:1
so has part: feature:51273-53756:1:exon
subclass of: SO_0000010

position:51273:1
position: 51273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53756:1
position: 53756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51273-53756:1:exon

CPHY_RS00235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00235
old locus tag: Cphy_0036
inference: COORDINATES: protein motif:HMM:NF039199.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF5702 domain-containing protein
translation: MRKQKASGVITIYLTLTLSIMITLIVTTIEMARVSAAKAYSERVLQTAMESTLCDYYLPLFERYHVFGLDIGYGSSIADSNLLVDEIRKGIEVSFLPTKDDPLSNLLLQNKTYLICNPMLEELSVENIHYITDLDGEFFRKQATSYMKYQAAADGLEYLLDSAHALEKTEKANLKFEEKMKVEQEFMLIDKDILKLMELIDGIKIKDNQIECKKGKPKTLDSFTKKLLSTEPTMENTLINHSTIFDSLKGNYLNYPNQLNSLKDSAQDVMERYRTAYENAVRQREEALLSLRAERADMIKESKDKPCDTTKIDARITSLEQSPITIDIYVLDSLMASCNSINQKMNSFLNTLKEVKEKANQALSLVQKIKEARYKAQDSKNSFLDGLNKAREEIGDALYEELSKSSEEMERYSNPEEKGIGIIKDIVSMEETLKQDIKVLDEVERYLLPNMTYTEEGYAAWLSKVNLIHTSLDHFKLDGLAFDYSGVNFSEEKNSILKAGKSLISDGLLNLVLEDVNSISKAELYQLELPSFTAKKSPEKSSQAENNIKNIMNTEDREDITTTGIGSYGTDALGSFANSLVEELLFQAYENEHCTYYLSEGYKPGQVLQYELEYLLYGNMSDKENVSSFINRLILIRTIGNMISVLTDANKVREASEFAALVVGFSGLPFLISVVKYVVLFIWALEQSLVETAAMLLGKNVPIFSMKDDFVVEFKDLANFNKDGITKKAKDYKTKEGILSVGYKGYLQISLFFSNKNNQYYRMMDLIQENFRYEYEDTFRIRNCVVSYRAVAKVSMPEQFFSLPFAIHREALSIHGYLYLAQKAVSY
SIO_010081: CPHY_RS00235
subclass of: SO_0000673
so part of: CPHY_RS00235
location: 51273..53756
location: region:51273-53756:1
so has part: feature:51273-53756:1:exon

WP_012198069.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51273-53756:1:exon

CPHY_RS00240
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00240
old locus tag: Cphy_0037
so part of: sequence
location: 53921..54835
location: region:53921-54835:1
so has part: feature:53921-54835:1:exon
subclass of: SO_0000010

position:53921:1
position: 53921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54835:1
position: 54835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53921-54835:1:exon

CPHY_RS00240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00240
old locus tag: Cphy_0037
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLKKREKGLLTLEASLALPIFAFAVYALVFFFQVIAAQDCLHYYATKVASNISSYGMITNYVMNFSEDEDSSAEIKENLNEDDETIFSGLFDTSDITNILTSAASGIMLKESIKPYVKDHHAITNCIQGGYAGISFLGSSLFDEEECIQVVMQYKIQLPIWKDILPVFPVVQRIRIRMFNGHAVPSSLKTDEGDNEDGEYVYITPNGTVYHTNANCSHIKINVQAVDSTRISFIYNSNHSTYRACELCFQKNSTLPSTVYITEYGDCYHSSRTCSGIKRTVIKVLLTEVGARGECSRCKTYKKE
SIO_010081: CPHY_RS00240
subclass of: SO_0000673
so part of: CPHY_RS00240
location: 53921..54835
location: region:53921-54835:1
so has part: feature:53921-54835:1:exon

WP_012198070.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53921-54835:1:exon

CPHY_RS00245
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00245
old locus tag: Cphy_0038
so part of: sequence
location: 54915..55349
location: region:54915-55349:1
so has part: feature:54915-55349:1:exon
subclass of: SO_0000010

position:54915:1
position: 54915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55349:1
position: 55349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54915-55349:1:exon

CPHY_RS00245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00245
old locus tag: Cphy_0038
EC number: 3.4.23.43
inference: COORDINATES: protein motif:HMM:NF013632.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: prepilin peptidase
translation: MSIFKLCGVIWIGVILFILGIQDIKRKEISCWWLISLLPLIVFELAMPSEITLIERIFGILLGLFFVILSKVTRGQIGIGDGYILCAMGVILGIGKSTILLSYAFLLTSAVSIVLLVFFRCNRKKTIPFVPFLFLGYLGCILIK
SIO_010081: CPHY_RS00245
subclass of: SO_0000673
so part of: CPHY_RS00245
location: 54915..55349
location: region:54915-55349:1
so has part: feature:54915-55349:1:exon

WP_012198071.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54915-55349:1:exon

CPHY_RS00250
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00250
old locus tag: Cphy_0039
so part of: sequence
location: 55496..56068
location: region:55496-56068:1
so has part: feature:55496-56068:1:exon
subclass of: SO_0000010

position:55496:1
position: 55496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56068:1
position: 56068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55496-56068:1:exon

CPHY_RS00250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00250
old locus tag: Cphy_0039
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: pilus assembly protein
translation: MIKKAFFTVEAAFVLPLVFYTILFLLNYSFYSHDRTKLQALGEEVALKAASYISYQVDMDWTVLREEDYLSKSILYPFGVGREKDERKVLSYVNETLTNGYWVCEIRDLQVQTTLSKVKITGKLKAVFPSAKLFGILKKDSFTVPFCFEESIFSREEKTRLFEVSINLGKKIKGVDKAVQKLKELVGKMK
SIO_010081: CPHY_RS00250
subclass of: SO_0000673
so part of: CPHY_RS00250
location: 55496..56068
location: region:55496-56068:1
so has part: feature:55496-56068:1:exon

WP_012198072.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55496-56068:1:exon

CPHY_RS00255
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00255
old locus tag: Cphy_0040
so part of: sequence
location: 56324..58066
location: region:56324-58066:1
so has part: feature:56324-58066:1:exon
subclass of: SO_0000010

position:56324:1
position: 56324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58066:1
position: 58066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56324-58066:1:exon

CPHY_RS00255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00255
old locus tag: Cphy_0040
inference: COORDINATES: protein motif:HMM:NF039422.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6382 domain-containing protein
translation: MGKEDIRSEWKRDMYHNYLIFNGRGEERASFQEKMLEHNKIEGILSFQVHSIDNHKQFHYEVTGYQAISCISEKVPLRLSQVTMLLNHLLAVLKDAKSYLLDTKDFVLLPEYTFIHLPDYKLGLCYYPGYHVPLQEQLVAFLEFLMGSVDYQDKEAVLFVYSLYMKSKEDSITIQELKSFMEELEVKDKSDTLYMENGLESQGKLDKVKEPQSNREPYQSKNTIKQPSNFNKHNEEKKNQKLKESLANPSRRNLLQYKVTSLLADTKERILGKENENGASKKYGNQKKETKKEHKYPFVKEKLEQEEEILYYPFFCYALFAVLFIVCIGIFLYTYQKGFLYQSLKKKIDGLKLISLLSVMGVILGYGYLKIFAKERKLSRIITRTTYQMPDKEDLFSNSVSSEDNSLIENSYRIHKQDNNLNFNNLSNFTWENNESPMIYGEDSSSDYSGESYGSGEAYHSGESYDEEECTILLTCPDKEYDTLIPLESTKYDTIEIKEYPFYIGTAKNNLGYSLINTAVSRYHAKLEKDESRFILTDLDSTNGTFVNGRKLMPNENFEIKQGDTVSFANIGFIFHCLNK
SIO_010081: CPHY_RS00255
subclass of: SO_0000673
so part of: CPHY_RS00255
location: 56324..58066
location: region:56324-58066:1
so has part: feature:56324-58066:1:exon

WP_012198073.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56324-58066:1:exon

CPHY_RS00260
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: glpK
locus tag: CPHY_RS00260
old locus tag: Cphy_0041
so part of: sequence
location: 58361..59860
location: region:58361-59860:1
so has part: feature:58361-59860:1:exon
subclass of: SO_0000010

position:58361:1
position: 58361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59860:1
position: 59860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58361-59860:1:exon

CPHY_RS00260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: glpK
locus tag: CPHY_RS00260
old locus tag: Cphy_0041
EC number: 2.7.1.30
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198074.1
GO function: GO:0004370 - glycerol kinase activity [Evidence IEA]
GO process: GO:0006071 - glycerol metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycerol kinase GlpK
translation: MEKYIMALDQGTTSSRCILFNQRGEVCSVAQKEFTQVYPRTGWVEHRPMDIWSSQISVAAEAMAAIGAKAEDIDSIGITNQRETTIVWDKNTGEPVYNAIVWQCHRTADMIEQLKKDGFDSVIRKKTGLIPDAYFSATKIKWILDNVDGVRERAEAGSLLFGTVDTWIIWNLTKGRVHVTDYTNASRTMLFDIHNLCWDDEILTYFKIPKSMLPKVQASSSIFGHTEEGLLGGEILISGAAGDQQAALFGQCCFEPGEVKNTYGTGCFLLMNTGDTAIESQNGLLTTIAAGDAGHIEYALEGSVFVAGAAIQWLRDEQRMIKKASQSEEYAKEVEDTNGVYVVPAFTGLGAPYWNPYARGTIVGITRGFSKEHMIRATLESLAYQTVNVLHAMEQDSNISLKSLRVDGGASANNFLMQFQADVLNTLVYRPQCIETTALGAAYLAGLATGYFKDRNEIKDNWTLGGTFSPQMDEQKRKELLKGWKRAVRCALAWAEDIE
SIO_010081: CPHY_RS00260
subclass of: SO_0000673
so part of: CPHY_RS00260
location: 58361..59860
location: region:58361-59860:1
so has part: feature:58361-59860:1:exon

WP_012198074.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58361-59860:1:exon

CPHY_RS00265
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00265
old locus tag: Cphy_0042
so part of: sequence
location: 59873..61063
location: region:59873-61063:1
so has part: feature:59873-61063:1:exon
subclass of: SO_0000010

position:59873:1
position: 59873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61063:1
position: 61063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59873-61063:1:exon

CPHY_RS00265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00265
old locus tag: Cphy_0042
EC number: 3.4.21.-
inference: COORDINATES: protein motif:HMM:NF013827.2
GO function: GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rhomboid family intramembrane serine protease
translation: MELYNKILEYFLTKGCQRLQVNASGMDVFYQTNLEQCTVYWLIEIYNGTEILNDQYQNIKRQIETAFFSKGYQKVLVYAILCTKNTEEALKICRMSESACIVDMLQYRLMLFEGQARDENGVFRGLEQLISEYGRLYFATHGGQDYSSQNTDSQGNNENSWGGYGSDYENQRSQGTHQQGSYQQGYGDYQSGKAYQRKNGFFSGVGIVTLVLIALNAVVFFYTDLSGNYNKIISEGCIFWPLIKFNNEYYRLLTYQFLHANISHLVNNMLILAIMGSTLERHVGKFKYLLIYFLSGIVAGIASMSYNMWKGLFSNSIGASGAVFGVIGAIALIVVVNKGRLETIGTRQIIIFIALSLYGGFTSQGVDNAAHVGGLLAGFFIAMLVYRKKRGRIRED
SIO_010081: CPHY_RS00265
subclass of: SO_0000673
so part of: CPHY_RS00265
location: 59873..61063
location: region:59873-61063:1
so has part: feature:59873-61063:1:exon

WP_012198075.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59873-61063:1:exon

CPHY_RS00270
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00270
old locus tag: Cphy_0043
so part of: sequence
location: 61053..62057
location: region:61053-62057:1
so has part: feature:61053-62057:1:exon
subclass of: SO_0000010

position:61053:1
position: 61053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62057:1
position: 62057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61053-62057:1:exon

CPHY_RS00270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00270
old locus tag: Cphy_0043
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006855362.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SCP2 sterol-binding domain-containing protein
translation: MKINIYYGGRGLIEDPTICVMNKMTEVLEELRVEVTRYNLYEQKNSISMLPGTLKEADGIILAVNVEWMGIGGFMQQFLDACWLYGDKQKMQTLSMFPIVTANTYGEREAELHLKRSWEVLGGTSLDGIIAYVENSIDFEVNTSYAGIFERKAESLYRFINQKSVTFSSSSHAVMKNTLTTTPIELTPQESEQLSMYVSDDTYVKKQKEDIEELAQMFRGMLEKSGSEKNQDFIKNFKDNFKPQEDNFQATFSITMTDTDKTLLLLVAGKQLKCSYEDNIEADVIAKTTKEMVNRLVNGRTTFQGAFMSGELTAKGDFKILRRFDQLFNFSALS
SIO_010081: CPHY_RS00270
subclass of: SO_0000673
so part of: CPHY_RS00270
location: 61053..62057
location: region:61053-62057:1
so has part: feature:61053-62057:1:exon

WP_012198076.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61053-62057:1:exon

CPHY_RS00275
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00275
old locus tag: Cphy_0044
so part of: sequence
location: 62196..62465
location: region:62196-62465:1
so has part: feature:62196-62465:1:exon
subclass of: SO_0000010

position:62196:1
position: 62196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62465:1
position: 62465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62196-62465:1:exon

CPHY_RS00275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00275
old locus tag: Cphy_0044
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009256234.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFRIWAKMIKDNHLLRDIVIEDDSTERTRTKKIFHALDEVCHEFDLSKPLWLEVTIKDFKKHDKTRFFQDNFIEQIEFDYLEIHVIEED
SIO_010081: CPHY_RS00275
subclass of: SO_0000673
so part of: CPHY_RS00275
location: 62196..62465
location: region:62196-62465:1
so has part: feature:62196-62465:1:exon

WP_012198077.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62196-62465:1:exon

CPHY_RS00280
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00280
old locus tag: Cphy_0045
so part of: sequence
location: 62635..63609
location: region:62635-63609:1
so has part: feature:62635-63609:1:exon
subclass of: SO_0000010

position:62635:1
position: 62635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63609:1
position: 63609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62635-63609:1:exon

CPHY_RS00280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00280
old locus tag: Cphy_0045
inference: COORDINATES: protein motif:HMM:NF024929.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M15 family metallopeptidase
translation: MIKFYQKPFKMFVVGTMILSLTACNETQDGTKVEVKSNYVVKEVLTSGKTEGNEKLQENNQIGIDETKSTDNSMNGSEMDIELFESSLDDLGSVLKPDSSEVVDMDTVKAINSMPAKSIVKVYTANAATLAECFYAEEISPSLFERMENKSFSEGCTISIDTLSYVRVLHFGFDGEIHIGELIVNKLIKEDVIDIFKELFDERYPIEQMVLIDEFDADDNESMAANNTSSFNYRMVEGTTTLSKHAYGLAIDINPKYNPYVRTINGETIIVPENGAEYEDRTLENEYYIMKDDVCQKAFAKRGFTWGGDWQTSKDYQHFQKVFQ
SIO_010081: CPHY_RS00280
subclass of: SO_0000673
so part of: CPHY_RS00280
location: 62635..63609
location: region:62635-63609:1
so has part: feature:62635-63609:1:exon

WP_012198078.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62635-63609:1:exon

CPHY_RS00285
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: dnaX
locus tag: CPHY_RS00285
old locus tag: Cphy_0046
so part of: sequence
location: 63796..65364
location: region:63796-65364:1
so has part: feature:63796-65364:1:exon
subclass of: SO_0000010

position:63796:1
position: 63796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65364:1
position: 65364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63796-65364:1:exon

CPHY_RS00285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: dnaX
locus tag: CPHY_RS00285
old locus tag: Cphy_0046
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004607171.1
GO component: GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit gamma/tau
translation: MSYMALYRKFRPDTFEDVKGQDHIVTTLKNQIKAKRIGHAYLFCGTRGTGKTTVAKILAKTVNCEHPIDGNPCNECAMCKAIQSQSSMNVIEIDAASNNGVDNIREIVEEVKYSPTEGNYKVYIIDEVHMLSAGAFNALLKTLEEPPSYVIFILATTEVHKIPITILSRCQRYDFRRVTIDEITKRLRVITEKEGIEAEEKALRYVARAADGSFRDALSLLDQCIAFYFGQSLTYDNVLDALGTVDIEVFARLLRYIRKGSVTDCVAILEELIIQGRELTQFTIDFTWYLRNLLLAKTSEDMEEILEMSSDQLQLLKQEAQSCDTELLIRFIRIFSELSNQVKYATQKRVMIEVALVKLCKPAMETDYASLIHRIQVLENRLEEGVFVTSKDEIEGAVPVVEKAKKASVPVELPKAVSADLQEVARNWNSILRSLPPLVRTVLISARVVPGEGNTIILVFEKEVDEGVINQESHLEEIKTAIADTIGKEVLVQTKVIKDGEALEAYPDLTKIMKKVPIEYVD
SIO_010081: CPHY_RS00285
subclass of: SO_0000673
so part of: CPHY_RS00285
location: 63796..65364
location: region:63796-65364:1
so has part: feature:63796-65364:1:exon

WP_012198079.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63796-65364:1:exon

CPHY_RS00290
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00290
old locus tag: Cphy_0047
so part of: sequence
location: 65391..65750
location: region:65391-65750:1
so has part: feature:65391-65750:1:exon
subclass of: SO_0000010

position:65391:1
position: 65391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65750:1
position: 65750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65391-65750:1:exon

CPHY_RS00290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00290
old locus tag: Cphy_0047
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008977555.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0008150 - biological_process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YbaB/EbfC family nucleoid-associated protein
translation: MAKRGGFPGGNMPGNMNNLMKQAQRMQKQMEDKTKEMEEKQWEATAGGGAVTVTVSGKKEVVSVKLSKEVVDPDDIEMLEDLIVAATNEALRKMEEESASAMNSIAGGLGNFGGLGGLF
SIO_010081: CPHY_RS00290
subclass of: SO_0000673
so part of: CPHY_RS00290
location: 65391..65750
location: region:65391-65750:1
so has part: feature:65391-65750:1:exon

WP_012198080.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65391-65750:1:exon

CPHY_RS00295
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: recR
locus tag: CPHY_RS00295
old locus tag: Cphy_0048
so part of: sequence
location: 66208..66804
location: region:66208-66804:1
so has part: feature:66208-66804:1:exon
subclass of: SO_0000010

position:66208:1
position: 66208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66804:1
position: 66804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66208-66804:1:exon

CPHY_RS00295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: recR
locus tag: CPHY_RS00295
old locus tag: Cphy_0048
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007707929.1
GO process: GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombination mediator RecR
translation: MDYYSTQISKLIEELGRLPGIGAKSAQRLAFHIINMPKEQVEHLAKTMLDARSNVKYCKVCQTLTDKEICPICSSEKRDQKVIMVVENTRDLAAYEKTGKFDGVYHVLHGAISPMLGIGPQDIKLKELMLRLQGDVDEVIIATNSSLEGEATAMYISKLIKPAGIKVSRIASGVPVGGDLEYIDEVTLLRALDGRIQL
SIO_010081: CPHY_RS00295
subclass of: SO_0000673
so part of: CPHY_RS00295
location: 66208..66804
location: region:66208-66804:1
so has part: feature:66208-66804:1:exon

WP_012198081.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66208-66804:1:exon

CPHY_RS00300
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00300
old locus tag: Cphy_0049
so part of: sequence
location: 66922..68031
location: region:66922-68031:1
so has part: feature:66922-68031:1:exon
subclass of: SO_0000010

position:66922:1
position: 66922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68031:1
position: 68031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66922-68031:1:exon

CPHY_RS00300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00300
old locus tag: Cphy_0049
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEHENVLSGGVETLYTMKENLSELEGYKGSSKEWSFKEEQAEEQLEERQKAITDEVGAVLRKRRQEVEASFEEQMNETKTRLKKVKSKKEKQLGKKVSERIEEETADLTKEGVRLKQDLKAIFQKNHISRVFNHKWFHAVFMPCSLKDFSILLITVLILFLAIPVGIYQFLLPAKTLYLVLDYFVTILVFGGLYILINKKIKENHTEAIIDMKAIRQKMAKNHKKIRAMAKGIRKDKDESVYGLDEITGEIRQLEDELNHLMEEKKNALVEFESTTKAAVSEEVKSRYEEEMKGLQSKVKEAHEEQRKAAEKVKEFSLEITNRYESYLGKDMLTNVAIDRLIEIMKEQNVTNIAEALNIYRADLNKPME
SIO_010081: CPHY_RS00300
subclass of: SO_0000673
so part of: CPHY_RS00300
location: 66922..68031
location: region:66922-68031:1
so has part: feature:66922-68031:1:exon

WP_012198082.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66922-68031:1:exon

CPHY_RS00305
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: yyaC
locus tag: CPHY_RS00305
old locus tag: Cphy_0050
so part of: sequence
location: complement(68096..68689)
location: region:68096-68689:-1
so has part: feature:68096-68689:-1:exon
subclass of: SO_0000010

position:68096:-1
position: 68096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68689:-1
position: 68689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68096-68689:-1:exon

CPHY_RS00305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: yyaC
locus tag: CPHY_RS00305
old locus tag: Cphy_0050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008120854.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: spore protease YyaC
translation: MKQFVEKNKKIFYFDSKERYSPYDFGNTLLNLLEVNSYKNKTIVFLCIGSDRATGDCLGPLLGYKLSHLPSKNYVVYGTLEEPVHAKNLKETVSRIYSENNNPFIIAIDASLGKASHVGYYTLGEGPLKPGAGVDKDLPYVGDLFVTGIVNLSGLFDQMLLQTTRLGTVMTLVDYICQGISHCMYLMRGRVMEKTNP
SIO_010081: CPHY_RS00305
subclass of: SO_0000673
so part of: CPHY_RS00305
location: complement(68096..68689)
location: region:68096-68689:-1
so has part: feature:68096-68689:-1:exon

WP_012198083.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68096-68689:-1:exon

CPHY_RS00310
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00310
old locus tag: Cphy_0051
so part of: sequence
location: 69062..70372
location: region:69062-70372:1
so has part: feature:69062-70372:1:exon
subclass of: SO_0000010

position:69062:1
position: 69062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70372:1
position: 70372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69062-70372:1:exon

CPHY_RS00310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00310
old locus tag: Cphy_0051
inference: COORDINATES: protein motif:HMM:NF013630.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysM peptidoglycan-binding domain-containing protein
translation: MNDTKFGYKSNQTAATMEKTASKIKIPKNVRQIGKIGDQLKIYMEDYVKTYTRQLAESDYASRCMAVLVGEYRHEEDNRNVFIYGAILVENCFEDGKIVLKEDSWAMIYEKIKQYFSEAEIVGWYYGGTGFGTDEITSLREFHIDNFAGRDKVLLTYDVLEKEDNFYIYDGYDLKQQPGYYIYYEKNLEMQNYMVDHKKVKHEELEINDRAMKEIRTILKEKKQPLDSDKEQRNMLRLGYAAGGLMTVVALVVGITVMNNTDRMKQLEQQVSSISKDIFDKDTNKNKDTSKEVAAITPIHDQDLVDEPNVDVSKGDNVDSVETSGNKTTPMPTKGTDEVTITPTIIPTLEPTKSPTVTPTATQAPAETPIPTKGADQTTSNIDVTKLKTYQVKSGDTLAGICMRLYGNYNMQKTIKELNQLVDENVIFEGQELLVP
SIO_010081: CPHY_RS00310
subclass of: SO_0000673
so part of: CPHY_RS00310
location: 69062..70372
location: region:69062-70372:1
so has part: feature:69062-70372:1:exon

WP_012198084.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69062-70372:1:exon

CPHY_RS00315
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00315
old locus tag: Cphy_0052
so part of: sequence
location: 70537..71733
location: region:70537-71733:1
so has part: feature:70537-71733:1:exon
subclass of: SO_0000010

position:70537:1
position: 70537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71733:1
position: 71733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70537-71733:1:exon

CPHY_RS00315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00315
old locus tag: Cphy_0052
inference: COORDINATES: protein motif:HMM:NF039834.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF5711 family protein
translation: MERLKRSLRADELNLKKKKKRRLILSLGVIGILIILGIAIVLHRKTAVYTSYKVVGSTELTNAKESSYLKYKNGVIKYNRDGAEAIGADGTVLWNVSYSMKKPIINVRGSYAAIADMGSYDLVIVNGSGTTNALTMKEPIAAVKIASQGVTAVLTGNGTTDYIYFYDMNSENGKSILDVKTMVTTDGFPTDIGISEDGTKLVTSYLAVDDDNDGVVSKVTFYNFGEYGKNQVDNLVGFYSDYRGEVIPKVEFLNNEIVAAFRDTGITLYSIKEVPREIMRQTYTEKIHSICYNDMYVGVILDGTNNTQERKVLLYDFSGKKILEKEVNFTFQNVTLIENQIIFYSSTECNIMNIDGSMKFSSQFHTNVTSLYQTSSMNEYLLVTDVGLDKIQLNKSEE
SIO_010081: CPHY_RS00315
subclass of: SO_0000673
so part of: CPHY_RS00315
location: 70537..71733
location: region:70537-71733:1
so has part: feature:70537-71733:1:exon

WP_012198085.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70537-71733:1:exon

CPHY_RS00320
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00320
old locus tag: Cphy_0053
so part of: sequence
location: 71737..72438
location: region:71737-72438:1
so has part: feature:71737-72438:1:exon
subclass of: SO_0000010

position:71737:1
position: 71737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72438:1
position: 72438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71737-72438:1:exon

CPHY_RS00320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00320
old locus tag: Cphy_0053
inference: COORDINATES: protein motif:HMM:NF014704.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CvpA family protein
translation: MNALVLIVVGILILCAFLGMRKGFIKTVFSIFSMVVALIFTLILSPYLGKSLQQNEKLVTYLSEKSAEVLKLDDIDDKINQTVEDSVIGKLPLPESLKNTLQKNNNSDTYDALGVKDFKGYVSHAVASIVINAISFAITYVVLIVLLRILSTVLNIISKLPILNQINKLVGLLAGGIHGLIIVWLLFILLTIFSGTKLGRECFTMMNESVFLSALYDNNLIMKFVMNLSGILG
SIO_010081: CPHY_RS00320
subclass of: SO_0000673
so part of: CPHY_RS00320
location: 71737..72438
location: region:71737-72438:1
so has part: feature:71737-72438:1:exon

WP_012198086.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71737-72438:1:exon

CPHY_RS00325
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00325
old locus tag: Cphy_0054
so part of: sequence
location: 72635..73597
location: region:72635-73597:1
so has part: feature:72635-73597:1:exon
subclass of: SO_0000010

position:72635:1
position: 72635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73597:1
position: 73597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72635-73597:1:exon

CPHY_RS00325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00325
old locus tag: Cphy_0054
EC number: 4.1.2.14
EC number: 4.1.3.16
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009060015.1
GO function: GO:0016832 - aldehyde-lyase activity [Evidence IEA]; GO:0016830 - carbon-carbon lyase activity [Evidence IEA]; GO:0016833 - oxo-acid-lyase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase
translation: MNEVLKRFEQLGIIPVVKIDDAKDAAPLAKALCEGGLPVAEVTFRTAAAEEAIRNMVEACPDMFVGAGTVLTTEQVDRAIAAGCKFIVSPGLNPKIVKYCIEKGIPITPGTSSPTDIEQAIELGLEAVKFFPAEASGGLAKIKAMAAPYVNMRFMPTGGISEKNLTSYLDFPKILACGGSWMVSEALINGGKFDEIKKLTREAVNTMLGFELKHVGINATSEEEADGVATSFEKLFGFTKNVGSSSIFAGSAIEVMKTPYLGAHGHIAIQTNYIERAIYHMELQGFEFDMDTAKYNGGKMVAVYLKGELGGFAVHLLQKK
SIO_010081: CPHY_RS00325
subclass of: SO_0000673
so part of: CPHY_RS00325
location: 72635..73597
location: region:72635-73597:1
so has part: feature:72635-73597:1:exon

WP_012198087.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72635-73597:1:exon

CPHY_RS00330
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00330
old locus tag: Cphy_0055
so part of: sequence
location: 73980..75317
location: region:73980-75317:1
so has part: feature:73980-75317:1:exon
subclass of: SO_0000010

position:73980:1
position: 73980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75317:1
position: 75317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73980-75317:1:exon

CPHY_RS00330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00330
old locus tag: Cphy_0055
inference: COORDINATES: protein motif:HMM:NF025675.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YcxB family protein
translation: MKRLQKLFVAICVMFAIMLTQVVTVSAAQTMTFDDLYMTLEISDDFIVLTPDTPKNDGRWAAAGIIQIDSKLKEFNDMGVKVLFYDKKSNTSVTMMVKDSSKTREIVNLVSMTDTELQEYFDSLVGKDSDTFVSTVEEYTHKQTPYFKLRLQSKEGESPVSEVVYGTIMNGKSIGFDIYKEGSYIQDKEEELVRSLVDNVSFTKILDASEITKESEIGIKDFITPILFILIIGVILFIFNKKNKKASQIKKKISQDMQEYRLNRRKLEEAGELTKEEALFTNSTEYHDQAIKTYCMYNQFFKRIGFWIYVIVLYLIILGYSLFFGTSIWMTIIVTIAGIVYGYYQGIAVEKMSEAMKKKYEGSRSKNAITKFYDDYFTVSGIQYISDFPYVQVTEVRKSKNYIYLYLGSEIAYFVDVTTFNKLEEENFMIFLKQRMGDKLKFKIR
SIO_010081: CPHY_RS00330
subclass of: SO_0000673
so part of: CPHY_RS00330
location: 73980..75317
location: region:73980-75317:1
so has part: feature:73980-75317:1:exon

WP_012198088.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73980-75317:1:exon

CPHY_RS00335
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00335
old locus tag: Cphy_R0013
so part of: sequence
location: 76012..77542
location: region:76012-77542:1
so has part: feature:76012-77542:1:exon
subclass of: SO_0000573

position:76012:1
position: 76012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77542:1
position: 77542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76012-77542:1:exon

CPHY_RS00335
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 357809
locus tag: CPHY_RS00335
old locus tag: Cphy_R0013
product: 16S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00177
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: CPHY_RS00335
subclass of: SO_0000673
so part of: CPHY_RS00335
location: 76012..77542
location: region:76012-77542:1
so has part: feature:76012-77542:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:76012-77542:1:exon

CPHY_RS00340
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: rrf
locus tag: CPHY_RS00340
old locus tag: Cphy_R0014
so part of: sequence
location: 77713..77830
location: region:77713-77830:1
so has part: feature:77713-77830:1:exon
subclass of: SO_0000573

position:77713:1
position: 77713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77830:1
position: 77830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77713-77830:1:exon

CPHY_RS00340
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 357809
gene: rrf
locus tag: CPHY_RS00340
old locus tag: Cphy_R0014
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: CPHY_RS00340
subclass of: SO_0000673
so part of: CPHY_RS00340
location: 77713..77830
location: region:77713-77830:1
so has part: feature:77713-77830:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:77713-77830:1:exon

CPHY_RS00345
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00345
old locus tag: Cphy_R0015
so part of: sequence
location: 77838..77911
location: region:77838-77911:1
so has part: feature:77838-77911:1:exon
subclass of: SO_0000663

position:77838:1
position: 77838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77911:1
position: 77911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77838-77911:1:exon

CPHY_RS00345
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 357809
locus tag: CPHY_RS00345
old locus tag: Cphy_R0015
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:77872..77874,aa:Ile,seq:gat)
SIO_010081: CPHY_RS00345
subclass of: SO_0000673
so part of: CPHY_RS00345
location: 77838..77911
location: region:77838-77911:1
so has part: feature:77838-77911:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:77838-77911:1:exon

CPHY_RS00350
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00350
old locus tag: Cphy_R0016
so part of: sequence
location: 77967..78039
location: region:77967-78039:1
so has part: feature:77967-78039:1:exon
subclass of: SO_0000663

position:77967:1
position: 77967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78039:1
position: 78039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77967-78039:1:exon

CPHY_RS00350
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 357809
locus tag: CPHY_RS00350
old locus tag: Cphy_R0016
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:78000..78002,aa:Ala,seq:tgc)
SIO_010081: CPHY_RS00350
subclass of: SO_0000673
so part of: CPHY_RS00350
location: 77967..78039
location: region:77967-78039:1
so has part: feature:77967-78039:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:77967-78039:1:exon

CPHY_RS00355
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00355
old locus tag: Cphy_R0017
so part of: sequence
location: 78313..81228
location: region:78313-81228:1
so has part: feature:78313-81228:1:exon
subclass of: SO_0000573

position:78313:1
position: 78313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81228:1
position: 81228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78313-81228:1:exon

CPHY_RS00355
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 357809
locus tag: CPHY_RS00355
old locus tag: Cphy_R0017
product: 23S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02541
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: CPHY_RS00355
subclass of: SO_0000673
so part of: CPHY_RS00355
location: 78313..81228
location: region:78313-81228:1
so has part: feature:78313-81228:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:78313-81228:1:exon

CPHY_RS00360
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00360
old locus tag: Cphy_R0018
so part of: sequence
location: 81292..81363
location: region:81292-81363:1
so has part: feature:81292-81363:1:exon
subclass of: SO_0000663

position:81292:1
position: 81292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81363:1
position: 81363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81292-81363:1:exon

CPHY_RS00360
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 357809
locus tag: CPHY_RS00360
old locus tag: Cphy_R0018
product: tRNA-Asn
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:81324..81326,aa:Asn,seq:gtt)
SIO_010081: CPHY_RS00360
subclass of: SO_0000673
so part of: CPHY_RS00360
location: 81292..81363
location: region:81292-81363:1
so has part: feature:81292-81363:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:81292-81363:1:exon

CPHY_RS00365
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00365
old locus tag: Cphy_R0019
so part of: sequence
location: 81410..81480
location: region:81410-81480:1
so has part: feature:81410-81480:1:exon
subclass of: SO_0000663

position:81410:1
position: 81410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81480:1
position: 81480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81410-81480:1:exon

CPHY_RS00365
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 357809
locus tag: CPHY_RS00365
old locus tag: Cphy_R0019
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:81442..81444,aa:Cys,seq:gca)
SIO_010081: CPHY_RS00365
subclass of: SO_0000673
so part of: CPHY_RS00365
location: 81410..81480
location: region:81410-81480:1
so has part: feature:81410-81480:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:81410-81480:1:exon

CPHY_RS00370
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00370
old locus tag: Cphy_0056
so part of: sequence
location: 81998..82324
location: region:81998-82324:1
so has part: feature:81998-82324:1:exon
subclass of: SO_0000010

position:81998:1
position: 81998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82324:1
position: 82324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81998-82324:1:exon

CPHY_RS00370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00370
old locus tag: Cphy_0056
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIKKQIVYTIIFLVVLFTSGCEKKQDYLNGTVSEVFDTYIIVTPKDDELLKEKAEKIVVTKTIALATGFPDLDVGDEIRVVYSGIKKEDDLMILDSVFAVYKSNELKY
SIO_010081: CPHY_RS00370
subclass of: SO_0000673
so part of: CPHY_RS00370
location: 81998..82324
location: region:81998-82324:1
so has part: feature:81998-82324:1:exon

WP_012198089.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81998-82324:1:exon

CPHY_RS00375
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00375
old locus tag: Cphy_0057
so part of: sequence
location: complement(82305..82850)
location: region:82305-82850:-1
so has part: feature:82305-82850:-1:exon
subclass of: SO_0000010

position:82305:-1
position: 82305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82850:-1
position: 82850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82305-82850:-1:exon

CPHY_RS00375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00375
old locus tag: Cphy_0057
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNIKKRILSILISCTLLAGLFNSITTLAAETDRYSLMKNKAILSLLENLNETGDFSAVLSLKDYDNSERYFYLPFLTGGYLIYDKKLDIIHEYSTTESNKYINDQNDLYYLGALSYYQKQNDMYIEIPTGNPIDNTTFSEIAMDLNSNLSMRSISPSTHYNLQNKSNTIRGIAIYISILIH
SIO_010081: CPHY_RS00375
subclass of: SO_0000673
so part of: CPHY_RS00375
location: complement(82305..82850)
location: region:82305-82850:-1
so has part: feature:82305-82850:-1:exon

WP_012198090.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82305-82850:-1:exon

CPHY_RS00380
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00380
old locus tag: Cphy_0058
so part of: sequence
location: 83519..85855
location: region:83519-85855:1
so has part: feature:83519-85855:1:exon
subclass of: SO_0000010

position:83519:1
position: 83519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85855:1
position: 85855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83519-85855:1:exon

CPHY_RS00380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00380
old locus tag: Cphy_0058
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012343387.1
GO function: GO:0043546 - molybdopterin cofactor binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: xanthine dehydrogenase family protein molybdopterin-binding subunit
translation: MRTTIDENIHRKEAWDKVTGKAQYTDDKPVTGYLHARILTSPYAHAKIKFIDYSKAIQLQGVKAIITGSDFPVLSGVLIEDRPPLAKDVVRYAGEAIAVVAATTEAIALKAVRMIEVEYEVLEAVFSPMEALKKDAPLLHPNLGYYKKKMADIHPVDQSNIASKFQVRKGDTKEGFAESDIIIERSYKLPPSDHLAMEVRAVRAEISADGKVKIETSSQAPYTVIKQISTCFQIPAGNIEVQVPFVGGAFGGKAPVTLEFLAYMICVKVNGAPVRLTVPREEDMTTAPCRLGLEADLKIGAKSDGTITAARFVFYLDTGAYADIGPYMAKSIVADCTGPYRIENLSCDSYCIYTNHTYSTSYRGFGHLCYTFCVERAMDDLAKRCGIDPLEFRKINAIKPGDLTPTQVVSTYSNTGNTELCLKKLKKLIHWNGESVKKIDENTVSATGISCLWKAADTRTNAISGSIITFNYDGSLNLNTGVVEMGSGGQTYLAQILADKLKMDVKDIHVSLSVNTRLNPEHYKTVASMTNYMAGNAVMKAADDVIEQLKAMGSQIYSCNPGEIEVAESKVFKKAQPDDYTLFKDIVLGYKAKNGASIGEPVIAKGGFMLKGLSLLDPNTGKGKTGPAWTVGAQAVEIEFNLTDFTYKIIKATTVMDVGKVINPNGMKEMIYGGMAMGLSMSSREVYHYNKEGRVKTPNLRTYKLLHIGQDPKFKVEFVETPQDDSPFGSRSISEHGIIGIPAALGNALAAASGVSIDELPMTPEYLWRRRKLSHDSK
SIO_010081: CPHY_RS00380
subclass of: SO_0000673
so part of: CPHY_RS00380
location: 83519..85855
location: region:83519-85855:1
so has part: feature:83519-85855:1:exon

WP_012198091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83519-85855:1:exon

CPHY_RS00385
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00385
old locus tag: Cphy_0059
so part of: sequence
location: 85842..86678
location: region:85842-86678:1
so has part: feature:85842-86678:1:exon
subclass of: SO_0000010

position:85842:1
position: 85842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86678:1
position: 86678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85842-86678:1:exon

CPHY_RS00385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00385
old locus tag: Cphy_0059
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020073119.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD binding domain-containing protein
translation: MIANDFIYCKPENRIEAIKAYKTLSKEKKVFYYGGGSEIITMARAGSRMPDAVIDLKGIKECNQLELTDENLVIGGAVSLNAIEESGLFPLLGTTGSRIADHTNQCRITLGGNISGTIIYKETVLPLLLTDARIILYGPRGFRRITFKNAFDQEIKLRNGEFIYQIKIKKEMLSLPFTHVKKTAIEKIDYPLVTVCSITYENRLRFAISGLCPFPFRSLEIEKILNNEQLSLEEKLKKTHGILPESPITDYEGTGEYRLFVFDNIIKSILERRNDEVL
SIO_010081: CPHY_RS00385
subclass of: SO_0000673
so part of: CPHY_RS00385
location: 85842..86678
location: region:85842-86678:1
so has part: feature:85842-86678:1:exon

WP_012198092.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:85842-86678:1:exon

CPHY_RS00390
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00390
old locus tag: Cphy_0060
so part of: sequence
location: 86662..87135
location: region:86662-87135:1
so has part: feature:86662-87135:1:exon
subclass of: SO_0000010

position:86662:1
position: 86662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87135:1
position: 87135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86662-87135:1:exon

CPHY_RS00390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00390
old locus tag: Cphy_0060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003384626.1
GO function: GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: (2Fe-2S)-binding protein
translation: MMKYYENDCVIELDVNNEIRKAAIRPSDVLLDVLREQLGLTGAKPGCKNGDCGTCTVLMDGLPAKSCLVLAIEAVGHKILTVEGLGGHAPIQEAFVQYNAFQCGYCTSGFLMVCHALSEKKPGADEFEMEKWLQSNICRCTSYQEIREAVKSVLKQV
SIO_010081: CPHY_RS00390
subclass of: SO_0000673
so part of: CPHY_RS00390
location: 86662..87135
location: region:86662-87135:1
so has part: feature:86662-87135:1:exon

WP_012198093.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:86662-87135:1:exon

CPHY_RS21545
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS21545
old locus tag: Cphy_0061
so part of: sequence
location: 87449..87607
location: region:87449-87607:1
so has part: feature:87449-87607:1:exon
subclass of: SO_0000010

position:87449:1
position: 87449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87607:1
position: 87607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87449-87607:1:exon

CPHY_RS21545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS21545
old locus tag: Cphy_0061
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLNIPGTCVKCGNHIELERHDNLAGAAYCPSCDFVLELTKEEFDQVSLLIEE
SIO_010081: CPHY_RS21545
subclass of: SO_0000673
so part of: CPHY_RS21545
location: 87449..87607
location: region:87449-87607:1
so has part: feature:87449-87607:1:exon

WP_012198094.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87449-87607:1:exon

CPHY_RS00395
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00395
old locus tag: Cphy_0062
so part of: sequence
location: complement(87739..88626)
location: region:87739-88626:-1
so has part: feature:87739-88626:-1:exon
subclass of: SO_0000010

position:87739:-1
position: 87739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88626:-1
position: 88626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87739-88626:-1:exon

CPHY_RS00395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00395
old locus tag: Cphy_0062
EC number: 2.4.99.-
inference: COORDINATES: protein motif:HMM:NF000778.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: prolipoprotein diacylglyceryl transferase
translation: MKNELIAIGPIKVYGYGLMIAIAILSAYSLTEYRAKKLKLEHEKVFSLVIWCATGGLLGAKLLYYITQIPEIINDPSILWKVTDGFVVYGGIIGGIFAGFLFCIKHKLNFLTYFDLAMPSIALAQGFGRIGCFLSGCCYGVETNCALGIVFHNSEYAPNGIRLVPTQLISSGMDFLHCFLLLFYAKRKKANGQVAALYLICYSIGRFVLEYFRGDLVRGNVGRFSTSQFISIFLLIIGIVFFVVLSLTAKKEVLNDSDEMVANVTEDQTNITNNSEELDSYSLTEDEEKSKDETL
SIO_010081: CPHY_RS00395
subclass of: SO_0000673
so part of: CPHY_RS00395
location: complement(87739..88626)
location: region:87739-88626:-1
so has part: feature:87739-88626:-1:exon

WP_012198095.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87739-88626:-1:exon

CPHY_RS00400
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00400
old locus tag: Cphy_0063
so part of: sequence
location: 89122..89832
location: region:89122-89832:1
so has part: feature:89122-89832:1:exon
subclass of: SO_0000010

position:89122:1
position: 89122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89832:1
position: 89832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89122-89832:1:exon

CPHY_RS00400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00400
old locus tag: Cphy_0063
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002600598.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphatase
translation: MDKLVADIHTHTIASGHAYGTIREMAQAAAEKHLRILGISEHAPGIPGTVDPFYFRNLEIVPRDLYGVHIIHGCEINVLNDGTLSLQQEYIDMLDYAIVGIHCQCYEDQGREKNTENLIKCMQNEKVHFISHPDDDHTPLNYKELVQAAKETHVALEVNNSSLIKKDRRLNCIENYKTMLHYCKQYHVPIIISSDAHDPSYVGRFNLAVDLIESQNFNKDLVLNVDSKKLISFIYD
SIO_010081: CPHY_RS00400
subclass of: SO_0000673
so part of: CPHY_RS00400
location: 89122..89832
location: region:89122-89832:1
so has part: feature:89122-89832:1:exon

WP_012198096.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:89122-89832:1:exon

CPHY_RS20440
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS20440
old locus tag: Cphy_0064
so part of: sequence
location: complement(89917..90717)
location: region:89917-90717:-1
so has part: feature:89917-90717:-1:exon
subclass of: SO_0000010

position:89917:-1
position: 89917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90717:-1
position: 90717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89917-90717:-1:exon

CPHY_RS20440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS20440
old locus tag: Cphy_0064
inference: COORDINATES: protein motif:HMM:NF012973.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FHIPEP family type III secretion protein
translation: MDYQRFAAKLLKQRQQLQLTQEELALRVGVTPQAISKWERGISLPDIELLYQLSKVLSLSMDELLDLPTSLTESDNDKDKERLFRAILSEPITLKVGCGFVDYLMKENQQGFPKLQQVRINMAKESGYLLPTVRILDDITLDNHCFQILFYDKVVYEQNNLNPSSSEYPEIFEQLNLTCTAHYEKLLHRQIVKDLIDNLSKLYPVLVDGYIPDKLSYAQIQFVLKSLIEHKKSIRNLCEIIEYLEDNLVLGKDLVSISNELIQLSY
SIO_010081: CPHY_RS20440
subclass of: SO_0000673
so part of: CPHY_RS20440
location: complement(89917..90717)
location: region:89917-90717:-1
so has part: feature:89917-90717:-1:exon

WP_012198097.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:89917-90717:-1:exon

CPHY_RS00410
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00410
old locus tag: Cphy_0065
so part of: sequence
location: complement(90930..91751)
location: region:90930-91751:-1
so has part: feature:90930-91751:-1:exon
subclass of: SO_0000010

position:90930:-1
position: 90930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91751:-1
position: 91751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90930-91751:-1:exon

CPHY_RS00410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00410
old locus tag: Cphy_0065
inference: COORDINATES: protein motif:HMM:NF024252.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MKFCDKLIELRRERGLSQEQLADQLDVSRQSVSKWESDQTMPELSKLITLSEIFEVSLDYLMRDYIMDRSGTREKKDNTVDDKDIPNRENRYSSLETQINEINDYIKRPRGFEYKSKKTLFGLPLIHICFLYSRHRIKVARGIIAIGAISVGVFSIGVLSLGLFALGALALGLLSFGAISLGAIAVGSIAIGYISIGALSIGVYSLGSLAVAKEIAVGAMASGNLAIGDESYGTYCYSIDAIQTKAMAKDIILTHYPSIPKFLLKIFTLFFHP
SIO_010081: CPHY_RS00410
subclass of: SO_0000673
so part of: CPHY_RS00410
location: complement(90930..91751)
location: region:90930-91751:-1
so has part: feature:90930-91751:-1:exon

WP_012198098.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90930-91751:-1:exon

CPHY_RS00415
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00415
old locus tag: Cphy_0066
so part of: sequence
location: complement(92474..93670)
location: region:92474-93670:-1
so has part: feature:92474-93670:-1:exon
subclass of: SO_0000010

position:92474:-1
position: 92474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93670:-1
position: 93670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92474-93670:-1:exon

CPHY_RS00415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00415
old locus tag: Cphy_0066
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNTKNKKLFLAPILIAFGLLLLIPIAKISAAEAKPVSIGKIDYDTLTMYVYTNNNTVVYYSTDKTTWYEVEGNKTTENDAFLMDISWVNSSDDITLYFKGENDKTIQNVTLPAKDTSLKVILDKTDNTFTFENCDAATHFEWKKANDYVWNKVPLDMKSASYQSFLKTIEGLLVKGAKVSFRIPQTVGTNEKNVGARPSKEVNITLAKRANAPSVKVNANKLMLNTTLSMEYFSDRKNVWIECDKNMTIEDIAPTTLFRNGSKSVTLKIRTAATTNKAYSKTAFLKINGQAGAPTIGDNSKDVSYYYQNGKLMLQFNNASKTDVYSYAIVKPGSTFNETTTAFTMMNTNKAKVITATTAPEGSTIYIRKQGINENTTKGIELELASEVNSFKVTYPKQ
SIO_010081: CPHY_RS00415
subclass of: SO_0000673
so part of: CPHY_RS00415
location: complement(92474..93670)
location: region:92474-93670:-1
so has part: feature:92474-93670:-1:exon

WP_012198099.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92474-93670:-1:exon

CPHY_RS00420
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00420
old locus tag: Cphy_0067
so part of: sequence
location: complement(93690..96077)
location: region:93690-96077:-1
so has part: feature:93690-96077:-1:exon
subclass of: SO_0000010

position:93690:-1
position: 93690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96077:-1
position: 96077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93690-96077:-1:exon

CPHY_RS00420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00420
old locus tag: Cphy_0067
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQTGTIAVKTTAKCSRNTYLCIIASIFFMLTMALGVFSPKTAYAAGASISIQEINYDNSTITVKVNSGDTVVYFSDENMKTWETIPTDIGTDRLVTLDISWITPTNKYVLTFKGDASTEAVKVTIPKQVTNFKASYNKVRGIVTFTNDYDRTIQWRKKDSYIWNTVNTDNFASQLEMLCTQGATVYLRLAPTNSYLVNGTLTEGERPSKEISLVIAKKIAAPNIVINGSKFSIQADKNLAYRTVGSDGTIGEWKNITTTTSLWLKDIAGSALYTNAGTTQCEVTLQFRKNPTSTSQVSHISTVTVPVQEAPPSDSDHGIEINYTSSTTFTLQVKAASETKPFEYTIVKPDNTLDYVTASWTSITSNAEITIKSDKAPVGSHVYVRKKSVPASGDIKFSLASKELDITGSKGVQYPSPAQATTLETLITTASVCNSENSAGNLTFTLYSPTKATVSSISFRDQYGNTKGTVSVKSSVSTNTASRFITDQYIITTKITSTESLDNLTETKLYAYITLSNNDVIESTTDSGVLLYIYPSSKINNKENKEYTSAFERLYGSTEAKDKSSFTFQIDLGTEKVPDTSAIGNFTTQDTEINSIKYDGYTLAPTTDYNVVYGSYTNDNGKKIRTATVTVNVNKFETISTITTKGKAVPLLIALNNGEEIDNKVTIKLVDTATLLDAPIAWSIMEGSLKETETKVTTNEDGSKTTETVEAITYELKLKLHDSSYAVGISDVTWGGTSILRSATVSGGTATVYLSNAKINKLTSSSSTTNNLVITLSNGFVIKSGCKLTIINAGK
SIO_010081: CPHY_RS00420
subclass of: SO_0000673
so part of: CPHY_RS00420
location: complement(93690..96077)
location: region:93690-96077:-1
so has part: feature:93690-96077:-1:exon

WP_012198100.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93690-96077:-1:exon

CPHY_RS00425
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00425
old locus tag: Cphy_0068
so part of: sequence
location: 96504..98186
location: region:96504-98186:1
so has part: feature:96504-98186:1:exon
subclass of: SO_0000010

position:96504:1
position: 96504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98186:1
position: 98186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96504-98186:1:exon

CPHY_RS00425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00425
old locus tag: Cphy_0068
EC number: 3.5.1.28
inference: COORDINATES: protein motif:HMM:NF013670.2
GO function: GO:0008745 - N-acetylmuramoyl-L-alanine amidase activity [Evidence IEA]
GO process: GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N-acetylmuramoyl-L-alanine amidase
translation: MLLFKKKVKSIVSFSIIFMLSIVFFSQPNFTAYASNEMPGYENPQDIIIASPKNNYTTTGSKVSILGACDYEYPLYMNGEEIETSEYGFFTVYVELEVGKNEFEFENNGVINTLTITRNKVTTSSGNNSTSGGNTTPKVTYKEYKNDVYGVITSSYAMPRSKISESNVNLMPLTLGTTSRLLGEDGSFYKLADGTYVSKSSIKRYDKTLEPNKVTKASVSKDTVANQLVIELSMNVNALYSVSFEGQNIYLKLYDTIAAAKPITTGNGIIEKVTVNTDSKNKTKTYCFTMFDNASIYGYDVTFKNGVMRFELKLPVILKDSKSLVGATVLLDAGHGDYDNGTVGAMGVYGPVEKDINLNITLYTKQYLEALGAKVVLIREDDTFYSLSDRVETIRKVKPDISVSIHGNSLDYASDYSKSSGFLTYYSYNLFGNFPNLMNNSITNELGLKKRDPRQSSLSLTRLTTCPSVLLETSFLSNPYDYEYLIQSKNQKDFGIAIGKAIQGYLQGIAKQNDQVYVVKKGDTLASIALKYGAPIKRLAEYNSIKDIDYIIVGQKILIP
SIO_010081: CPHY_RS00425
subclass of: SO_0000673
so part of: CPHY_RS00425
location: 96504..98186
location: region:96504-98186:1
so has part: feature:96504-98186:1:exon

WP_012198101.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96504-98186:1:exon

CPHY_RS00430
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00430
old locus tag: Cphy_0069
so part of: sequence
location: 98284..98904
location: region:98284-98904:1
so has part: feature:98284-98904:1:exon
subclass of: SO_0000010

position:98284:1
position: 98284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98904:1
position: 98904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98284-98904:1:exon

CPHY_RS00430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00430
old locus tag: Cphy_0069
inference: COORDINATES: protein motif:HMM:NF024083.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amidase domain-containing protein
translation: MVVSYDPALAVAYAVQFGDQEQNGIFKRMSEDCTNFISQCIWAGYGGTEGYSLTSEADILALRERVAKNYRQTSIWYGRNYASPSPIASGAFIRVEELWNYVTTNRGPGPKAIGYNNRQYWGYAPVDLALGDVLQFYHSNLGRYGHTVMVTATTENPQPIESALGNVYVAQHTADYSYRPFSDVLDTNGGIEGAWMRVLKFTDTYF
SIO_010081: CPHY_RS00430
subclass of: SO_0000673
so part of: CPHY_RS00430
location: 98284..98904
location: region:98284-98904:1
so has part: feature:98284-98904:1:exon

WP_012198102.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:98284-98904:1:exon

CPHY_RS00435
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00435
old locus tag: Cphy_0070
so part of: sequence
location: 99198..100577
location: region:99198-100577:1
so has part: feature:99198-100577:1:exon
subclass of: SO_0000010

position:99198:1
position: 99198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100577:1
position: 100577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99198-100577:1:exon

CPHY_RS00435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00435
old locus tag: Cphy_0070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004455993.1
GO function: GO:0008270 - zinc ion binding [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TldD/PmbA family protein
translation: MISKSILNAVLAKALSTGADFAEVFAERTLSKNISMIDSKVSEITDSLLSGVGIRILMGTRSVYASTTDLSYSGLINCAAQVASALSGVPNGKSIHLTERIFGDIHPIRIVPSSVSNAQKIDLLKEGYFSAKNYHKEIAQVMGNILDVDHNIMIANSDGLYTEDRQVRTRMVISAIASKDGENQTGSFAPGRRMGLEMFDMISPKSIGEKAAKQAITMLHADYCPAGNYPVAIENGFGGVIFHEACGHSLESSSVALGQSVFSNKLGKQIANPKVTAIDDGTISNAWGSINVDDEGNSSRRNVLIENGILKSYMIDKLGGRRMGMEATGNCRRQSYAWEPTSRMTNTMILAGQDKNEDIISSMEYGLYAADMGGGSVNPITGEFNFSVREGYMVRDGKICEPVRGASLIGKGSEILMNIDMVGTNLATGQGMCGSSSGSIPTDVGQPLLRVSSITVGGR
SIO_010081: CPHY_RS00435
subclass of: SO_0000673
so part of: CPHY_RS00435
location: 99198..100577
location: region:99198-100577:1
so has part: feature:99198-100577:1:exon

WP_012198103.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:99198-100577:1:exon

CPHY_RS00440
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00440
old locus tag: Cphy_0071
so part of: sequence
location: 100774..102117
location: region:100774-102117:1
so has part: feature:100774-102117:1:exon
subclass of: SO_0000010

position:100774:1
position: 100774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102117:1
position: 102117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100774-102117:1:exon

CPHY_RS00440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00440
old locus tag: Cphy_0071
inference: COORDINATES: protein motif:HMM:NF039907.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metallopeptidase TldD-related protein
translation: MNYNEFKQAVIEAAKEAGLTEYELYYSMTSSIDTEIHKEDVKSFSSSKNGGACFRCIINGKMGYAATEKYDEEEARNIIIRAMDNASSIESEDEVVLYGERDTYEQVTKKAETLPSADLLIEKAIACNKATYEQDSRVIDATESGAFASTVSVSIYNSKGLDLNHEVSLSAVYSVAVIEEKEEMLDSFDFQLGNMEAVNVNKVAKKAVEGAVEQIGAVKAASGKTRVVFSEKMMATMLSTFAEIFSAENAQKGLSLLQSKENTAIASDVVTIVDDPFYLGSTLQMPFDAEGVATFTKEIVKDGRLNTLLYNLKTAKKAGIKSTGNASKSTYSSSVSTLPYYFYIKPSSKTKEELFTIAGDGLYITELQGMHAGANPTTGDFSLGASGFIIKDGKKGSCVKGFTVAGNFYKLLHSIEAISNELEFILPKGLSSFGAPCVLVSELSIAG
SIO_010081: CPHY_RS00440
subclass of: SO_0000673
so part of: CPHY_RS00440
location: 100774..102117
location: region:100774-102117:1
so has part: feature:100774-102117:1:exon

WP_012198104.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100774-102117:1:exon

CPHY_RS00445
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00445
old locus tag: Cphy_0072
so part of: sequence
location: 102232..103299
location: region:102232-103299:1
so has part: feature:102232-103299:1:exon
subclass of: SO_0000010

position:102232:1
position: 102232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103299:1
position: 103299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102232-103299:1:exon

CPHY_RS00445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00445
old locus tag: Cphy_0072
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014793469.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta fold hydrolase
translation: MKDMRVTVMRITRGKKEKSAEIIGWRKKLLFGCVFLLATLVLAVVFAPFILVYYITRGPVLYQVEASFDHPLQEVYKASDFLLEDKMLPIRTQDGFSLWASEIEVENPKAIVIYLTDLKQPSITYFYGHAKWMKDNGYASILLETRGHGESDGDVIGLGYTEVNDVKAVVEYIQKQECYRDVPIVLQGFSMGGAVAINAFGQIPEIDALIAMSAYTSTEDAMIDSMRDHGVPEFLCKIERPLIKFALSIVFGRDAVETLKPIEQIKNANDRPVFFISSKEDLKVSLENIRRFREVNPEAEYWVRDSAAHLDIDDNDFTNVEKDTEYCNRILDFLDKVKKAKQNVLSMTKKAYFLL
SIO_010081: CPHY_RS00445
subclass of: SO_0000673
so part of: CPHY_RS00445
location: 102232..103299
location: region:102232-103299:1
so has part: feature:102232-103299:1:exon

WP_242657961.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102232-103299:1:exon

CPHY_RS00450
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00450
old locus tag: Cphy_0073
so part of: sequence
location: 103427..103810
location: region:103427-103810:1
so has part: feature:103427-103810:1:exon
subclass of: SO_0000010

position:103427:1
position: 103427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103810:1
position: 103810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103427-103810:1:exon

CPHY_RS00450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00450
old locus tag: Cphy_0073
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012740109.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GntR family transcriptional regulator
translation: MLLALDFSSDVPIYLQIRNQIVLGISQGKLLPGEKLPTIRCLANEIGVNTMTVNKAYQVLKQEGYITADRRSGAMVKVRESDTLGWKEKQIEDLRLVISEIKLCGIEKEELLKKCDLFYEEVSRHDR
SIO_010081: CPHY_RS00450
subclass of: SO_0000673
so part of: CPHY_RS00450
location: 103427..103810
location: region:103427-103810:1
so has part: feature:103427-103810:1:exon

WP_012198106.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103427-103810:1:exon

CPHY_RS00455
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00455
old locus tag: Cphy_0074
so part of: sequence
location: 103800..104237
location: region:103800-104237:1
so has part: feature:103800-104237:1:exon
subclass of: SO_0000010

position:103800:1
position: 103800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104237:1
position: 104237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103800-104237:1:exon

CPHY_RS00455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00455
old locus tag: Cphy_0074
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIVNIIMLISMLPILPIIYYLMINEAEPKKNIVLGVTLPAEQLDNSTVLQIIARYKKELRIWTVCLLPVLILPFFIKSFAIGFSIQMLWVLIVAMLSFYPFAKYNMQLSKLKKDREWGVTYTNTVVVDMKAAREIQVRGLTIWYL
SIO_010081: CPHY_RS00455
subclass of: SO_0000673
so part of: CPHY_RS00455
location: 103800..104237
location: region:103800-104237:1
so has part: feature:103800-104237:1:exon

WP_012198107.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103800-104237:1:exon

CPHY_RS00460
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00460
old locus tag: Cphy_0075
so part of: sequence
location: 104359..105003
location: region:104359-105003:1
so has part: feature:104359-105003:1:exon
subclass of: SO_0000010

position:104359:1
position: 104359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105003:1
position: 105003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104359-105003:1:exon

CPHY_RS00460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00460
old locus tag: Cphy_0075
inference: COORDINATES: protein motif:HMM:NF022338.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PH domain-containing protein
translation: MSFMLSTMIYSVVIVFISIYSELKVRKLQRKYSMDQPMDVVVDDDSNWIFGMLYYNPRDKHTLIAKRVGMGTTCNLATKAGKVLAGFVIIALLSIPLSCVWIFFEEFTPISLQVENHELIATHLKEEYKIPLDEIIEIEYLTSLPRTSKNVGTGLDNLYKGDFSVKGYGSCEVFLNPETEAFLVLHTKEETYIFSDETTEKTIEVYKKLKEVVQ
SIO_010081: CPHY_RS00460
subclass of: SO_0000673
so part of: CPHY_RS00460
location: 104359..105003
location: region:104359-105003:1
so has part: feature:104359-105003:1:exon

WP_157668633.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:104359-105003:1:exon

CPHY_RS00465
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00465
old locus tag: Cphy_0076
so part of: sequence
location: 105399..106172
location: region:105399-106172:1
so has part: feature:105399-106172:1:exon
subclass of: SO_0000010

position:105399:1
position: 105399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106172:1
position: 106172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105399-106172:1:exon

CPHY_RS00465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00465
old locus tag: Cphy_0076
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015616380.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding cassette domain-containing protein
translation: MDEIIVKLEGLAKRFDTKVAVDFVNLEIKKGEIFGLLGPNGAGKSTTMNMICTLVKPTSGQIELFGSDIKKEERKSLSRIGYVPQDLAIHEALRAWENVELFASLYGIKGEELKKAVDNSLDFVGLSEHRKGLPKNFSSGMKRRLNIACALGHHPELLILDEPTVGIDPQSRNFILEKIKYLNKMGVTVLYTSHYMEEIEAICTRLAIMDNGKVIACGTKEELVQLVSDDPMSEISLEQIFLTLTGKKLRDYAEGEM
SIO_010081: CPHY_RS00465
subclass of: SO_0000673
so part of: CPHY_RS00465
location: 105399..106172
location: region:105399-106172:1
so has part: feature:105399-106172:1:exon

WP_012198109.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:105399-106172:1:exon

CPHY_RS00470
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00470
old locus tag: Cphy_0077
so part of: sequence
location: 106174..107232
location: region:106174-107232:1
so has part: feature:106174-107232:1:exon
subclass of: SO_0000010

position:106174:1
position: 106174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107232:1
position: 107232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106174-107232:1:exon

CPHY_RS00470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00470
old locus tag: Cphy_0077
inference: COORDINATES: protein motif:HMM:NF024110.2
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MLTYLVKNNMKLILRGKLIFIMMILMPVFLITLLSSTFDSMLNVNYSLKEYEVGYAVSEDSYIHPMLETMKTVGAKSKLKLIPYTKEVGLEKVNDQTLDLYVEFGTKEYVIYQTEETKAATMILKSVMSSLMQKDSIQEAVYRVEDIPANPIPAAKNYYGIVEIVYFMWCGILSISAVINSERKGQIRSRMKMSPTSTASLYLGKFIPCVMVLCIQMGIAMIITFFTLGIDWGEKIYLSLGILFLQSMAVSAFSIMLYHIFQNVAAAIVSCFIIVFGWGLFGGSFQTYMFTTTSDTMAAISPIYYLNRTLVEYSTRGSSEYALPCVFILLTMILIGSTVSILLCKFGKGERV
SIO_010081: CPHY_RS00470
subclass of: SO_0000673
so part of: CPHY_RS00470
location: 106174..107232
location: region:106174-107232:1
so has part: feature:106174-107232:1:exon

WP_012198110.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106174-107232:1:exon

CPHY_RS00475
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00475
old locus tag: Cphy_0078
so part of: sequence
location: 107229..108488
location: region:107229-108488:1
so has part: feature:107229-108488:1:exon
subclass of: SO_0000010

position:107229:1
position: 107229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108488:1
position: 108488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107229-108488:1:exon

CPHY_RS00475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00475
old locus tag: Cphy_0078
inference: COORDINATES: protein motif:HMM:NF024110.2
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MTGFFTMFKANVRLLLRNKGFVCCIFFLPLLTLLWLAMPLKYPIESEGINIIEVEAGERILLSMVDIELSIKVYDASDSKSSQYLLDGLLDTGGYSVYREKVTDKTIAQIKEEATLTANRSNLGIQLYLPKDFEERILSGEYKEAILVLKSNEDERIPLLYENLNRLVGDMVELSHIEPPTKEDSIRSYHELLEAKDGSIENRVETVSTKNSRVITAKERHQKENFGYTISFLSLSSLLIGVFITGIFLKEKEYQVLKRITLTQTKIAGYGLAKIILIIPTTMLQTGIYLLGLNTFVKADIGVNNSEFTLMAFGIGFTFQLLSITLGTLFDNILTVSYVAFFAWVFTSTLSGLYFPVEKASSLIKSLSYLMPQSWTIRFFDGIKGANTGIYSMFILIMLAFCIVFLSIGVFGLKITEKE
SIO_010081: CPHY_RS00475
subclass of: SO_0000673
so part of: CPHY_RS00475
location: 107229..108488
location: region:107229-108488:1
so has part: feature:107229-108488:1:exon

WP_012198111.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107229-108488:1:exon

CPHY_RS00480
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00480
old locus tag: Cphy_0079
so part of: sequence
location: 108728..109885
location: region:108728-109885:1
so has part: feature:108728-109885:1:exon
subclass of: SO_0000010

position:108728:1
position: 108728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109885:1
position: 109885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108728-109885:1:exon

CPHY_RS00480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00480
old locus tag: Cphy_0079
inference: COORDINATES: protein motif:HMM:NF019350.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: histidine kinase
translation: MNENIIRYQFVLIKGLLLGAVFLYHVMEQQNKLLSQYGVWVIYALLFAALIAQGITKRHKALLLLIQTGLVIVMISWFGREYALVLPVIFLSIAGSLKIRYPYYATAILGAFVYSGNIAVYLLFTFVCILLFIQNDVIIDKYKNLLQSYEQNEQRLKHSMDNQSHIYKKELIENSLFFENKLLEEKGRLSQALHDKLGHSINGSIYQLEATKVLLTSEPEQANGILQAVIDNLRISMDEIRQLLRGEKPDKRKMALLQLMTLCDECKKKYNIEAEVIMSGDNKSVPEYIWEVILDNSFEAVSNALKYSKCKHITIQIVILNKLVRCTIEDDGVGCMQINEGMGIAGMRKRVRAINGVLDVTAQIGFCINMILPISTLYNNARSEK
SIO_010081: CPHY_RS00480
subclass of: SO_0000673
so part of: CPHY_RS00480
location: 108728..109885
location: region:108728-109885:1
so has part: feature:108728-109885:1:exon

WP_012198112.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108728-109885:1:exon

CPHY_RS00485
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00485
old locus tag: Cphy_0080
so part of: sequence
location: 109893..110531
location: region:109893-110531:1
so has part: feature:109893-110531:1:exon
subclass of: SO_0000010

position:109893:1
position: 109893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110531:1
position: 110531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109893-110531:1:exon

CPHY_RS00485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00485
old locus tag: Cphy_0080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015616374.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator transcription factor
translation: MEPIKVIIADDSDFVRDGMRIILSVDPDFEVVGCAKNGKEAVELASKSSVDVILMDIEMPVMNGIEATKEIVLHNLGKVLILTTFDDDELVEQSIQNGAKGYLIKNHTPEKLKQMIKSIYNGVNVLDEKVFEKFTSRSIHTNTGFDPNGYTTRELDIIASVAEGLSNKEIAKKLFISEGTVKNHISTILEKGGFSHRTQLAVYYLTGKKQGE
SIO_010081: CPHY_RS00485
subclass of: SO_0000673
so part of: CPHY_RS00485
location: 109893..110531
location: region:109893-110531:1
so has part: feature:109893-110531:1:exon

WP_012198113.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:109893-110531:1:exon

CPHY_RS00490
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00490
old locus tag: Cphy_0081
so part of: sequence
location: 110768..111313
location: region:110768-111313:1
so has part: feature:110768-111313:1:exon
subclass of: SO_0000010

position:110768:1
position: 110768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111313:1
position: 111313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110768-111313:1:exon

CPHY_RS00490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00490
old locus tag: Cphy_0081
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009169244.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH peroxidase
translation: MKKFVCSVCGYVHEGDSAPDKCPICNADSSKFIEKSGELQWADEHVIGISSDANDEILEGLRANFMGECTEVGMYIAMSRQADREGYPEVAEAYKRIEYEEADHASRFAEMLGEVVKASTSDNLAARVDAEYGACEGKKKLATLAKSMNLDAIHDSVHEMAKDEARHGCAFKGLLDRYFGK
SIO_010081: CPHY_RS00490
subclass of: SO_0000673
so part of: CPHY_RS00490
location: 110768..111313
location: region:110768-111313:1
so has part: feature:110768-111313:1:exon

WP_012198114.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110768-111313:1:exon

CPHY_RS00495
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00495
old locus tag: Cphy_0082
so part of: sequence
location: 111417..111740
location: region:111417-111740:1
so has part: feature:111417-111740:1:exon
subclass of: SO_0000010

position:111417:1
position: 111417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111740:1
position: 111740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111417-111740:1:exon

CPHY_RS00495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00495
old locus tag: Cphy_0082
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013655660.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1540 domain-containing protein
translation: MSNVMCGATNCSYNQGHVCCANTIKVGGKAATSEESTCCASFLNRAVYSNLAEYTSMRGTSKEILCNVATCNYNSADHCSLDEIEVGGSSQTSFYTETDCLSFDKLS
SIO_010081: CPHY_RS00495
subclass of: SO_0000673
so part of: CPHY_RS00495
location: 111417..111740
location: region:111417-111740:1
so has part: feature:111417-111740:1:exon

WP_012198115.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111417-111740:1:exon

CPHY_RS00500
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00500
old locus tag: Cphy_0083
so part of: sequence
location: 111752..112369
location: region:111752-112369:1
so has part: feature:111752-112369:1:exon
subclass of: SO_0000010

position:111752:1
position: 111752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112369:1
position: 112369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111752-112369:1:exon

CPHY_RS00500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00500
old locus tag: Cphy_0083
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002585626.1
GO function: GO:0010181 - FMN binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flavin reductase
translation: MDPKAFHKISYGVFIVSAEGSDHKAGCVINTLTQVTSSPMKLSIALNKNNDTLEVIKEAGTFSAVVLKEDVDLGLIKIFGFFSSRDKNKFESISYKFDDNNNPYPAGGIVAQFSCRLCDSLDVGSHVICIGEVTDANLVSEDPPLTYADYHSKKGGATPKNSPSYQEGTTGYQCTVCGYIEETDDLPDDFICPVCGKDASYFRKL
SIO_010081: CPHY_RS00500
subclass of: SO_0000673
so part of: CPHY_RS00500
location: 111752..112369
location: region:111752-112369:1
so has part: feature:111752-112369:1:exon

WP_012198116.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111752-112369:1:exon

CPHY_RS00505
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00505
so part of: sequence
location: 112584..112766
location: region:112584-112766:1
so has part: feature:112584-112766:1:exon
subclass of: SO_0000010

position:112584:1
position: 112584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112766:1
position: 112766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112584-112766:1:exon

CPHY_RS00505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00505
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTPVTFITLCFARCWRSFYWNTIDDNEKIMDKKRLWTRKGYGQEKVMDKKSFWDKQRIIK
SIO_010081: CPHY_RS00505
subclass of: SO_0000673
so part of: CPHY_RS00505
location: 112584..112766
location: region:112584-112766:1
so has part: feature:112584-112766:1:exon

WP_041703017.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:112584-112766:1:exon

CPHY_RS00510
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00510
old locus tag: Cphy_0084
so part of: sequence
location: 112892..113914
location: region:112892-113914:1
so has part: feature:112892-113914:1:exon
subclass of: SO_0000010

position:112892:1
position: 112892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113914:1
position: 113914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112892-113914:1:exon

CPHY_RS00510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00510
old locus tag: Cphy_0084
EC number: 6.3.2.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015522215.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0008716 - D-alanine-D-alanine ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: D-alanine--D-alanine ligase
translation: MKVVVLAGGLSPEREVSLSSGSKIANALMEKGYEVLLLDLYLGIKDVTNIDSLFRKMEDQNPYQYQVPKEEPNLTKLKEDSGNGGILIGENVLLLCQYADKVFLALHGSIGENGQLQAMFDIYGISYTGSGYIGSLLAMDKGLSKVIMQKHGIETPDYIVADLTEEQELEKTLMLPCVIKPLSCGSSVGVSIVRSQEELGKALDYAKKYENKVLIEELIVGREFSVGILNHHALPLIEIIPKTGFYDYTNKYQAGMATEVCPAQLEDEISIKMQEAALKVHEVLQLGFYSRVDFLLKEDGSFYCLEANTLPGMTPTSLLPQEAAAIGISYSKLCELILLG
SIO_010081: CPHY_RS00510
subclass of: SO_0000673
so part of: CPHY_RS00510
location: 112892..113914
location: region:112892-113914:1
so has part: feature:112892-113914:1:exon

WP_012198117.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:112892-113914:1:exon

CPHY_RS00515
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00515
old locus tag: Cphy_0085
so part of: sequence
location: 114069..115049
location: region:114069-115049:1
so has part: feature:114069-115049:1:exon
subclass of: SO_0000010

position:114069:1
position: 114069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115049:1
position: 115049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114069-115049:1:exon

CPHY_RS00515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00515
old locus tag: Cphy_0085
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRKNKILILFLVIFTLTTTNIVTLLYLNHIIHSNSEQLVFAYDAIMVRDNEISRLEGLENENNRLTLENQTLNTTNENLTSQKEQLSREQSSLKQQVSEQSEEIVVLTNQNLNMNRVLEKYSYFLDYEPEILNEYQTYIKELEQKVESSGSFDIYEVPKRKKVYEGYTIWLEDGASERWADQAMDYLKLVPAKALEVLNKDKWYLIITPRSLEEVYHSGVENTIGLTIYYRKRIYIKNNEFSIDSCTLHEIGHALDALNSYQSFTEGFNDIFNEESAASGLSKYFTSSPTEYFAETFQNYFISPELTKRNAPKSYAFIEKFLEKYE
SIO_010081: CPHY_RS00515
subclass of: SO_0000673
so part of: CPHY_RS00515
location: 114069..115049
location: region:114069-115049:1
so has part: feature:114069-115049:1:exon

WP_012198118.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114069-115049:1:exon

CPHY_RS00520
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00520
old locus tag: Cphy_0086
so part of: sequence
location: complement(115163..115414)
location: region:115163-115414:-1
so has part: feature:115163-115414:-1:exon
subclass of: SO_0000010

position:115163:-1
position: 115163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115414:-1
position: 115414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115163-115414:-1:exon

CPHY_RS00520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00520
old locus tag: Cphy_0086
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013656602.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: (2Fe-2S) ferredoxin domain-containing protein
translation: MLINICIGSACHLKGSYNVITEMQQLMEEDSYGSQIELKSVFCLGHCQSGVSVQIDDEPTIYSVSKDSVKDFYYNTVIPKLKG
SIO_010081: CPHY_RS00520
subclass of: SO_0000673
so part of: CPHY_RS00520
location: complement(115163..115414)
location: region:115163-115414:-1
so has part: feature:115163-115414:-1:exon

WP_041703020.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:115163-115414:-1:exon

CPHY_RS00525
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00525
old locus tag: Cphy_0087
so part of: sequence
location: complement(115437..117140)
location: region:115437-117140:-1
so has part: feature:115437-117140:-1:exon
subclass of: SO_0000010

position:115437:-1
position: 115437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117140:-1
position: 117140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115437-117140:-1:exon

CPHY_RS00525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00525
old locus tag: Cphy_0087
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008428984.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016695 - oxidoreductase activity, acting on hydrogen as donor [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: [FeFe] hydrogenase, group A
translation: MAKYMIIDGNRVEFNDEPNILALVRKAGIDLPTFCYYSDLSIYGACRMCVVEDQWGGIIASCSTPPKDKMEVKTNTPKLHQHRKMILELLLAAHCRDCTVCDKNGKCRLQELAHRFGIKSVRFENKTEEMELDTSSASIIRDPGKCILCGDCVRMCNEIQNVGAIDFAHRGAKMIVSPAFNKKIAETNCVNCGQCAAVCPTAAITVKSDLKDVWKAIYNPKKRVVVQVAPAVRVALGEEFHMKAGENVIGKIVAALRRLGFDAIFDTSVGADLTIMEESKELLKKLEAGENKYPLFTSCCPGWIRYAETKHKELLPYISTCKSPMEMFGAVIKEHFKGLDSTEGVETVSVAIMPCSAKKYEASREEFKRNDIPDVDYVITTIELVKMIKEIGIQFEEIEPEAPDMPFSLYSGAGVIFGVTGGVTEAAVRRVVADKSPKALKDIEFLGLRGMEGVKVCELQVEENSIVRIGVVSGLANAEALIEKIESGEEHFDFVEVMACPGGCIAGAGQPFSHKEEKNARALGMYKADKVSQIKRCEENPLMLSLYNGMLKHRTHELLHVSYRKED
SIO_010081: CPHY_RS00525
subclass of: SO_0000673
so part of: CPHY_RS00525
location: complement(115437..117140)
location: region:115437-117140:-1
so has part: feature:115437-117140:-1:exon

WP_012198120.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:115437-117140:-1:exon

CPHY_RS00530
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00530
old locus tag: Cphy_0088
so part of: sequence
location: complement(117158..119044)
location: region:117158-119044:-1
so has part: feature:117158-119044:-1:exon
subclass of: SO_0000010

position:117158:-1
position: 117158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119044:-1
position: 119044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117158-119044:-1:exon

CPHY_RS00530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00530
old locus tag: Cphy_0088
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015394439.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region domain-containing protein
translation: MLIRSREELDALKVRYQKSFKSQYKQILICGGTGCVAGGSLNIYARLKELIEESGLDVSVSLEDEPHEAVGIKKSGCHGFCEMGPLLRIEPAGVLYIKVKVEDCEEIVEQSIIKDGVVERLLYKDSEGNSYNKQEDIPFYKQQTRVALEHCGHINAESINEYIAMGGYQAVAKALFDMTSESIVDEISDSYLRGRGGGGFPTGKKWAQVLRQTEETKYVVCNGDEGDPGAFMDRSMMEGDPHRMIEGMIIAGIATKAHYGYIYVRAEYPLAVHRLETAIEQARSLGLLGCNILGSGFSFALKISQGAGAFVCGEGSALTASIEGNRGMPRVKPPRTVEKGLFEKPTVLNNVETFCNVPSIILKGADWYKTYGLEKNYGTKAFALTGNVMNTGLIEVPMGTTLRKVIYDIGGGVKGGEFKAVQIGGPSGGCLVLNAENDHLDMPLDFDSLKKVGAMIGSGGLVVMNDKSCMVEVARFFMNFTQNESCGKCVPCREGTKRMLELLTDIVEGRGTLEHLDLLEELAETISATALCGLGKTAASPVVSTIKYFRDEYIAHVVDKKCPAGQCKALMTLKIIPELCKGCTKCARLCPVSAISGEVKKLHSIDTKKCIKCGACKDSCGFKAIIEE
SIO_010081: CPHY_RS00530
subclass of: SO_0000673
so part of: CPHY_RS00530
location: complement(117158..119044)
location: region:117158-119044:-1
so has part: feature:117158-119044:-1:exon

WP_012198121.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:117158-119044:-1:exon

CPHY_RS00535
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00535
old locus tag: Cphy_0089
so part of: sequence
location: complement(119038..119523)
location: region:119038-119523:-1
so has part: feature:119038-119523:-1:exon
subclass of: SO_0000010

position:119038:-1
position: 119038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119523:-1
position: 119523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119038-119523:-1:exon

CPHY_RS00535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00535
old locus tag: Cphy_0089
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009254144.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)H-dependent oxidoreductase subunit E
translation: MLGQDEKGLIDNILTAHDYNKSHVIAIMQEVQKVYRYLPEEVLCYIAEKLKLSEAKIYGVATFYENFSLEPKGKYVIKICDGTACHVRKSIPILEEFRKVLGVTEKNPTTDDMIFTVETVSCLGACGLAPVCTVNDVVHAAMTPEKAKALIEQLREEAFQC
SIO_010081: CPHY_RS00535
subclass of: SO_0000673
so part of: CPHY_RS00535
location: complement(119038..119523)
location: region:119038-119523:-1
so has part: feature:119038-119523:-1:exon

WP_012198122.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:119038-119523:-1:exon

CPHY_RS00540
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00540
old locus tag: Cphy_0090
so part of: sequence
location: complement(120033..121487)
location: region:120033-121487:-1
so has part: feature:120033-121487:-1:exon
subclass of: SO_0000010

position:120033:-1
position: 120033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121487:-1
position: 121487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120033-121487:-1:exon

CPHY_RS00540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00540
old locus tag: Cphy_0090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006778913.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4Fe-4S dicluster domain-containing protein
translation: MLQTDNDIGTIKHEVLFEVAKLAFKNQLADKEDVLPYEMIPGPQANFRCCVYKEREIIRQRIRLAQGKSPSLSHDSSNIVQVISSACEECPITRFLVTDNCQKCMGKRCQKACNFQAISMSHDRAHIDPAKCKECGMCASACPYNAIADLKRPCKKSCPVDAISMDENNIVVIDEEKCINCGQCINNCPFGAISDRSFMVDVINLLSIDKPIYAMIAPAIEGQFGATATTGVMTEALKQLGFTGVYEVALGADLVAASEAEEWAEAYKEGMKKTTSCCPAFVKMIKNHYPSLVEHISSTISPMQATAKYIKAIHEDAITVFIGPCIAKKGEVLDHIAEGGADYALTFDELYAMLRAKDINLETIGENIQQGSIFAKNFAVAGGVTASVVEALKEKGIDAPITVAGCNGAAECKKALTLLKVGKFPEDFMEGMCCEGGCVNGPGSILTGRFAAKNRAKLLSSADDRKIYDTVDSCQDLNIQMHRH
SIO_010081: CPHY_RS00540
subclass of: SO_0000673
so part of: CPHY_RS00540
location: complement(120033..121487)
location: region:120033-121487:-1
so has part: feature:120033-121487:-1:exon

WP_012198123.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:120033-121487:-1:exon

CPHY_RS00545
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00545
old locus tag: Cphy_0091
so part of: sequence
location: complement(121534..122706)
location: region:121534-122706:-1
so has part: feature:121534-122706:-1:exon
subclass of: SO_0000010

position:121534:-1
position: 121534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122706:-1
position: 122706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121534-122706:-1:exon

CPHY_RS00545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00545
old locus tag: Cphy_0091
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007863167.1
GO function: GO:0016791 - phosphatase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SpoIIE family protein phosphatase
translation: MSVTIDVSYKSLNKNNEELCGDKVEILKTKDSNIIILADGMGSGVKANILATLTSKILGTMFLNGAGIEECVQTIVKTLPVCQVRQVAYSTFSILQIFKTGDAYLVEFDNPACVFIRDGALLTVPYKERMIEGKCIREYRFEVALNDCFILMSDGVIHAGVGKALNFGWTWTNMAEYSVQATNSTLSASRLVSILSKACDDLYMQSPGDDTTVAVARVIDSKPVHLFTGPPLNPVDDTTAVYAFLEGTATRIVSGGTSANIVARVLNRPIHTSLNYTDPNMPPIAYIEGIDLVTEGVLTLTRALKLMREYVEKEVNEDFFLELDKDNGGSKIAKIIIEECTELHLFVGRTMNEAHQNPSLPFDLSIRMNLVTQIIDIVHKMGKEAIVKYY
SIO_010081: CPHY_RS00545
subclass of: SO_0000673
so part of: CPHY_RS00545
location: complement(121534..122706)
location: region:121534-122706:-1
so has part: feature:121534-122706:-1:exon

WP_012198124.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:121534-122706:-1:exon

CPHY_RS00550
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00550
old locus tag: Cphy_0092
so part of: sequence
location: complement(122755..124488)
location: region:122755-124488:-1
so has part: feature:122755-124488:-1:exon
subclass of: SO_0000010

position:122755:-1
position: 122755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124488:-1
position: 124488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122755-124488:-1:exon

CPHY_RS00550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00550
old locus tag: Cphy_0092
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002604583.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: [Fe-Fe] hydrogenase large subunit C-terminal domain-containing protein
translation: MNVIGFKEAKCKNCYKCVRNCDVKAITVKDAQAYIMNDKCILCGHCLEVCPQNAKTLISDLERVKGYLREGYQTVVSLAPAYLGVLHYNTPGQVISALLKLGFTAVRETAEGAAYVTREYDNLIAAGEMENIITTCCPSLNDLVEIYYPSLTKYLAPVVSPMIAHGKIIREQYGPNVKVVFLGPCISKKREAESDPRTVGIIDAVINFKELEEWLLEEGIDIFKQPDTPPDNPNPLVNRLYPISSGVLSSVVASKNTSDHYRKFYVHGINNCIDLLESMNRGEITGCFIEANICNGGCIKGPAIDRTRISRFKVKLDMEESIPKAPITEEDFFTKSPIHFDKFFLGRSPKDPVPTEKEVMQILAKIGKTKPEDMLNCGACGYATCRDKANAVYQGKAELNMCIPYMHERAQSMANFVLDTTPNIIIIVDAEMKIMEFSAAAEKYFRTPRSVAKEMYLYEFIDHSNFQAVLETQKDIIGKRVIYEDRNLATLQTIVYSKEQNCVLGIFQDISHQEELDRKAYKVKVETIEMAQRVIDKQMKVAQEIAGLLGETTAETKVTLTKLRDTILNDGKPYDIF
SIO_010081: CPHY_RS00550
subclass of: SO_0000673
so part of: CPHY_RS00550
location: complement(122755..124488)
location: region:122755-124488:-1
so has part: feature:122755-124488:-1:exon

WP_012198125.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:122755-124488:-1:exon

CPHY_RS00555
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00555
old locus tag: Cphy_0093
so part of: sequence
location: complement(124488..124730)
location: region:124488-124730:-1
so has part: feature:124488-124730:-1:exon
subclass of: SO_0000010

position:124730:-1
position: 124730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124488-124730:-1:exon

CPHY_RS00555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00555
old locus tag: Cphy_0093
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002568891.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)H-dependent oxidoreductase subunit E
translation: MVVTICVGSSCHLKGSREIITRLETLITENKLKSKVELNGAFCMGQCVKGVCIKLDGEPFSLTPKDTDSFFHGEILRRLT
SIO_010081: CPHY_RS00555
subclass of: SO_0000673
so part of: CPHY_RS00555
location: complement(124488..124730)
location: region:124488-124730:-1
so has part: feature:124488-124730:-1:exon

WP_012198126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:124488-124730:-1:exon

CPHY_RS00560
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00560
old locus tag: Cphy_0094
so part of: sequence
location: complement(124837..125703)
location: region:124837-125703:-1
so has part: feature:124837-125703:-1:exon
subclass of: SO_0000010

position:124837:-1
position: 124837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125703:-1
position: 125703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124837-125703:-1:exon

CPHY_RS00560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00560
old locus tag: Cphy_0094
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005214249.1
GO function: GO:0005504 - fatty acid binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DegV family protein
translation: MNPTHRKELMIRIISDTSTLYSVSEAEEKGIYVSPLAVTINDTTYEEFNDIQTEEFVDLIHQGHIPLSSQPAIGRVVDLYNRFPEDEILNITMADGLSGTYQSAILAKDMAKDSERITVLNSKTLCGPHRTLVEHAKHLADQNHTISEIVSKLEKMIASSRSFLIPQDFDYLRRGGRLSHLAAFVGKTIHLVPVMTLTKDCKQLCNFSIKRNFKKAIHEIIRSLEDDNIGEHHKLYVSHSLAESLAITASELLKEAFPHSDVIIYKLSPAFTTQGGPGCIAIQSLSME
SIO_010081: CPHY_RS00560
subclass of: SO_0000673
so part of: CPHY_RS00560
location: complement(124837..125703)
location: region:124837-125703:-1
so has part: feature:124837-125703:-1:exon

WP_012198127.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:124837-125703:-1:exon

CPHY_RS00565
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: asnS
locus tag: CPHY_RS00565
old locus tag: Cphy_0095
so part of: sequence
location: 126338..127729
location: region:126338-127729:1
so has part: feature:126338-127729:1:exon
subclass of: SO_0000010

position:126338:1
position: 126338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127729:1
position: 127729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126338-127729:1:exon

CPHY_RS00565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: asnS
locus tag: CPHY_RS00565
old locus tag: Cphy_0095
EC number: 6.1.1.22
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002605622.1
GO function: GO:0004816 - asparagine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: asparagine--tRNA ligase
translation: MELVQVRELFRNKEQYLGKKITVGGWVRSVRDTKTFGFIVMSDGTFFETLQIVYTDKLSNFAEISKFNVGSAVVVTGTLVATPDAKQPFEIQAEEVLLEGASTSDYPLQKKRHSLEFLRAMTHLRPRTNTFQAVFRVRSLVAYAIHKFFQERDFVYVHTPLITGSDCEGAGEMFQVTTLDLNNIPKTKEGQVDFDQDFFNKPTNLTVSGQLNGETYAMAFKNIYTFGPTFRAENSNTTRHAAEFWMIEPEIAFADLKDDMILAESMLKYVIKYVLEHAPEEMEFFNSFVDQGLLERLQHVANSDFGHVTYTEAIEILEKNNDKFEYKVSWGCDLQTEHERFLTEQIFKKPVFVTDYPKEIKAFYMKLNEDNKTVAAMDLLVPGIGEIIGGSQREDDYDKLVAKMKESDLNEEDYDFYLDLRKYGSARHAGFGLGFERCVMYLTGMGNIRDVIPFPRTVNNCDL
SIO_010081: CPHY_RS00565
subclass of: SO_0000673
so part of: CPHY_RS00565
location: 126338..127729
location: region:126338-127729:1
so has part: feature:126338-127729:1:exon

WP_041703815.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:126338-127729:1:exon

CPHY_RS00570
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00570
old locus tag: Cphy_0096
so part of: sequence
location: complement(127890..128408)
location: region:127890-128408:-1
so has part: feature:127890-128408:-1:exon
subclass of: SO_0000010

position:127890:-1
position: 127890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128408:-1
position: 128408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127890-128408:-1:exon

CPHY_RS00570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00570
old locus tag: Cphy_0096
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006444637.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: QueT transporter family protein
translation: MKDKTLYFLLHSAMIAAIYVVLVVLFQPISVSYIQVRFAEALTILPFFTPAAIPGVAIGCLLGNVIAGCDMLDIVFGTLATLLGAIGSYSLRRYKFLVPIPPIVANTVIIPWVLRFAYGEAMSIPFMMLTVGIGEVISCGIIGIILLYCLKPYKKIFYIPGFAKSKDKYDIV
SIO_010081: CPHY_RS00570
subclass of: SO_0000673
so part of: CPHY_RS00570
location: complement(127890..128408)
location: region:127890-128408:-1
so has part: feature:127890-128408:-1:exon

WP_012198129.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:127890-128408:-1:exon

CPHY_RS00575
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00575
so part of: sequence
location: complement(128873..128977)
location: region:128873-128977:-1
so has part: feature:128873-128977:-1:exon
subclass of: SO_0000010

position:128873:-1
position: 128873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128977:-1
position: 128977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128873-128977:-1:exon

CPHY_RS00575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00575
inference: COORDINATES: protein motif:HMM:NF028245.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: putative holin-like toxin
translation: MTVAEALSLMIAFATFVIALITLVVHLIKMNNKK
SIO_010081: CPHY_RS00575
subclass of: SO_0000673
so part of: CPHY_RS00575
location: complement(128873..128977)
location: region:128873-128977:-1
so has part: feature:128873-128977:-1:exon

WP_041703024.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:128873-128977:-1:exon

CPHY_RS20445
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS20445
old locus tag: Cphy_0097
so part of: sequence
location: 129389..129880
location: region:129389-129880:1
so has part: feature:129389-129880:1:exon
subclass of: SO_0000010

position:129389:1
position: 129389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129880:1
position: 129880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129389-129880:1:exon

CPHY_RS20445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS20445
old locus tag: Cphy_0097
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016297188.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MDTEKIGKFIADRRKVRGLTQQQLADDLGLTNKAISKWETGQGMPDITTLPILAEMLGITVNELLKGELNQSIDKKENGIETNYSVHKSVYWFKAMACLSIFIALMGNIVPLFMLRETSTIAAFLFGCWFEVCSLAVFVVFYLRMKGEIEFNSKTSVLKMNSL
SIO_010081: CPHY_RS20445
subclass of: SO_0000673
so part of: CPHY_RS20445
location: 129389..129880
location: region:129389-129880:1
so has part: feature:129389-129880:1:exon

WP_012198130.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:129389-129880:1:exon

CPHY_RS00585
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00585
so part of: sequence
location: 129895..130083
location: region:129895-130083:1
so has part: feature:129895-130083:1:exon
subclass of: SO_0000010

position:129895:1
position: 129895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130083:1
position: 130083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129895-130083:1:exon

CPHY_RS00585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00585
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKYELWLWLLAPSALLVTMVFKALSWNNLVMHILVTIAITIIVGLQLFFRIMNTAKVTTKVK
SIO_010081: CPHY_RS00585
subclass of: SO_0000673
so part of: CPHY_RS00585
location: 129895..130083
location: region:129895-130083:1
so has part: feature:129895-130083:1:exon

WP_041703027.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:129895-130083:1:exon

CPHY_RS00590
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00590
old locus tag: Cphy_0098
so part of: sequence
location: complement(130233..131072)
location: region:130233-131072:-1
so has part: feature:130233-131072:-1:exon
subclass of: SO_0000010

position:130233:-1
position: 130233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131072:-1
position: 131072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130233-131072:-1:exon

CPHY_RS00590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00590
old locus tag: Cphy_0098
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013270976.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MerR family transcriptional regulator
translation: MSENKNEYLTTGEFAKICGIPKHILFHYDQIKLFQPEIIKENGYRYYSFRQFDTFSIISALKMLGMPLKEIKQYMDERNPAKLIELLEQKSNEAAKEIIKLKNTKREIDALKDLTKNALSVEYNIIEPAYHKSMKALCSTLMDNSNDNSYSNFLTELIAFRNNSNASMIDFLGASLTIDNIREKRFDSFSYLYTKSNNADKKNNTLVRKEGWYLQVYYKGSYRNISEMYTKIMQYAKEHKIKLGENAYEDYLIFEIGTRDRDDYVTLILVEIEDEPQAL
SIO_010081: CPHY_RS00590
subclass of: SO_0000673
so part of: CPHY_RS00590
location: complement(130233..131072)
location: region:130233-131072:-1
so has part: feature:130233-131072:-1:exon

WP_012198131.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:130233-131072:-1:exon

CPHY_RS00595
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00595
old locus tag: Cphy_0099
so part of: sequence
location: 131424..133151
location: region:131424-133151:1
so has part: feature:131424-133151:1:exon
subclass of: SO_0000010

position:131424:1
position: 131424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133151:1
position: 133151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131424-133151:1:exon

CPHY_RS00595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00595
old locus tag: Cphy_0099
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003496244.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MKLMLKYLKRYPKLILLNILGIFSFVAVQLGIPTVMAWMIDNGIGNSDIAYIKKMGGIMLIVCVLGGAGTILLTYASSRISTNMIRDIRNDVFIQSQNFSHTEYNKFGVSSMITRTTNDAFQLMLFSNMLFRTALLAPVMIFISVFMTIKTSVSLSLVIGGSFPFIVAGVIIIAKLTNPLSKKQQKGMDQLNRISRENLTGVRVIRAFRKSEYESERFAETNDNYASNSKKLFKIMSFTQPAFFFLLHLAMMAVFWISSLMIDKGTLQVGQLVAFLEYQFHAMFSIMLFSMVFVMYPRAQVSANRIQELLDEEPLVKTPTNGITAENKGVVEFDHVTFQYPDGELPVIKDVSFTANKGETVAFIGSTGSGKSTLINLIPRFYDVTSGSIKIDGVDTQNYDLKALRQKIGFIPQKAFLFKGTIEDNLRFGNPNATPEEINHAIEVAQAKEFIENKPKKLQEYISEGAKNVSGGQKQRISIARALVRKPEIYIFDDSFSALDYKTDATLRAALKKETKESIVFIVAQRISTIMNADKIIVLNEGEVVGMGTHKELLKSCNIYYEIADSQLTKEELER
SIO_010081: CPHY_RS00595
subclass of: SO_0000673
so part of: CPHY_RS00595
location: 131424..133151
location: region:131424-133151:1
so has part: feature:131424-133151:1:exon

WP_012198132.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:131424-133151:1:exon

CPHY_RS00600
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00600
old locus tag: Cphy_0100
so part of: sequence
location: 133148..134902
location: region:133148-134902:1
so has part: feature:133148-134902:1:exon
subclass of: SO_0000010

position:133148:1
position: 133148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134902:1
position: 134902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133148-134902:1:exon

CPHY_RS00600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00600
old locus tag: Cphy_0100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013270978.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MKKLYPYIKPYLKFFIVAILLTIGYAGFLSAAPMVEGFITTRLKDDVVNIANKVPGAAISFSYIIKILKLLLVIYIGNVLCSYGSQYFLTTGIQNTMRDLRNDVQRKIAKLPISYFDKRTVGDILSIISNDIDTMSNALQQSLSRILSAFLSITLAIILMFYINPIMGAVAVLLIPGSAFIMKFIMKRSSVMFKKQQVALGNLNGYIQERYTGLTEIKLYGKQEDSIEQFKEINNNLCENGFRAQFISGLMSPLISFLTYIAIVAVTILGATFTITGAITVGQLQAFIRYMWQLNEPLEQVTQLSSAIQSAMAASARVFEFLSETEEVPEAENPVKINDLKGNVTFENVSFGYNKDKMLIEHLNVNVKSGQMVAIVGPTGAGKTTLINLLMRFYDVNNGAIKVDGVNIKDMKRDDLRSIFGMVLQDTWLFNGTIADNIKYGKEDATRQEIENAAKTANVNHFIKTQPDGYNMILNEESSNVSVGEKQLLTIARAFLADPAILILDEATSSVDTRLELMLQTAMKNIMKDRTSFVIAHRLSTIRNADLILVMKSGTIIEQGTHDELMKKKGFYEKLYMSQFQNQA
SIO_010081: CPHY_RS00600
subclass of: SO_0000673
so part of: CPHY_RS00600
location: 133148..134902
location: region:133148-134902:1
so has part: feature:133148-134902:1:exon

WP_012198133.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133148-134902:1:exon

CPHY_RS00605
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00605
old locus tag: Cphy_0101
so part of: sequence
location: complement(135190..136272)
location: region:135190-136272:-1
so has part: feature:135190-136272:-1:exon
subclass of: SO_0000010

position:135190:-1
position: 135190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136272:-1
position: 136272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135190-136272:-1:exon

CPHY_RS00605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00605
old locus tag: Cphy_0101
EC number: 3.1.4.-
inference: COORDINATES: protein motif:HMM:NF014069.2
GO function: GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HD-GYP domain-containing protein
translation: MNVVNIPVAQVVSGMIVAEDVYNSGNERILSRNTMVTTKSITKLKLHAIKEIFVYIPNTLVKKQTTKPSEHITALKNSEEFKKFKKFYLGSILTLKDSFSSLTGTSSLPYDENKLLDSVEQLLKECRSSLRTFDMLQCIRDLDDQIYVHSLNVALICFSFATWLNFNAHDAEQLMLAGLLHDIGKLKLPKDIIQKPAALNKKELEHVHQHPVTGYDLVKDRKIDPRVKKAILMHHERCDGSGYPNKLSSKDISPFGKILAIADVYDAMTAKRVYRKEICPFDVVENFEKEGFQKYDAAYLLPFLEGLAQCYINASVRLSNSLVGEVVMINKNKLSRPVVKVDEQFIDLSKHKELRISSIL
SIO_010081: CPHY_RS00605
subclass of: SO_0000673
so part of: CPHY_RS00605
location: complement(135190..136272)
location: region:135190-136272:-1
so has part: feature:135190-136272:-1:exon

WP_012198134.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:135190-136272:-1:exon

CPHY_RS00610
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00610
old locus tag: Cphy_0102
so part of: sequence
location: 136465..137550
location: region:136465-137550:1
so has part: feature:136465-137550:1:exon
subclass of: SO_0000010

position:136465:1
position: 136465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137550:1
position: 137550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136465-137550:1:exon

CPHY_RS00610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00610
old locus tag: Cphy_0102
EC number: 3.1.-.-
inference: COORDINATES: protein motif:HMM:NF024258.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0042578 - phosphoric ester hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA repair exonuclease
translation: MNFIHVADVHLGATPESDRGWDINREKEIYDSFRRVTTECEEKKIDLLLISGDLFHKQPLLRELKEVNYIFSKLTHTKVVLIAGNHDYIGPRSNYQNFNWCDCVTMLSGGEMDSIYFEELNTEVYGLSYVSREIFEPKYDAIIPGVEERINILLAHGGNENNIPINYKKVEEAGFDYVALGHFHKPQLITDRMAYVGSLEPLSKGEPLPHGYYYGEITKEKRKTEERYESNLSLTFVPIACREYMTKEIEVTPDMFGTGIVDFARNIINENGSRNFYQFLLVGKTDPSILLDIEDFYRLGYVTEVLNHTLPDYDFGSLYGENKDNLIGSYIRRIRESDANEDLVDKALYYGIEALLNTKER
SIO_010081: CPHY_RS00610
subclass of: SO_0000673
so part of: CPHY_RS00610
location: 136465..137550
location: region:136465-137550:1
so has part: feature:136465-137550:1:exon

WP_012198135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:136465-137550:1:exon

CPHY_RS00615
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00615
old locus tag: Cphy_0103
so part of: sequence
location: 137559..139694
location: region:137559-139694:1
so has part: feature:137559-139694:1:exon
subclass of: SO_0000010

position:137559:1
position: 137559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139694:1
position: 139694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137559-139694:1:exon

CPHY_RS00615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00615
old locus tag: Cphy_0103
inference: COORDINATES: protein motif:HMM:NF024867.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MIIKELNPGHFGKFHNVNVELTPGINVIYGKNEAGKSTLHAFVKGMLFGIERLRGRAGKEDLYVKYQPWDTPGAYQGSMVLSVDGEDYRIIRSFYKKERSIKIIRESTGRELTDAELGVSAIIPKLTESIYRNTISIEQLRAKTEYELAEELKNYITNLSMSKSKEVDVNGAISYLLEKKKKLEKRLPDDRLATLTSELKELQDTLKKLDDLSGELAELKKRSEYLENKQKEYNRSTNQERMKKVAYYPAILEKFNRFLEMKQSAKNAEEKVEGLGEKTKKQASELDSSNTIGEHLKELGELRQRKQELEEELKEKRQEIEPHLKQGSISGRVIGVIIVVLGLAISSIPFPFPFMTILIRCIIGIAFLVAGISKYILTATKEEKTKQKLEDMKTECERQIFYLHSKWHDILLSHRVSNESQLMVKYNDVLKNEVEREQALERKIEYQAAAKQFHNKADELEYEIIDYMKHFLGNPEASKECMQELWQEIEEFKEEIINEMSANEEEHTNIRSQMERIRWTLESNVECEVKLDQKQTEQEELCELRKELLEEIEAITLGIQTLKELSTDIHDSFGSTLNQMLSEIVSSISQGEYTSIIVDEKLNVSVLHLGQYVSLDKLSAGTMDQIYLALRLSVASLLFPEENMPILLDDTFALYDEERTKAALKLLAKETNRQVIIFTCHRREKELLEECKVPYHYVDLNEIGKKPFEYA
SIO_010081: CPHY_RS00615
subclass of: SO_0000673
so part of: CPHY_RS00615
location: 137559..139694
location: region:137559-139694:1
so has part: feature:137559-139694:1:exon

WP_012198136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:137559-139694:1:exon

CPHY_RS00620
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00620
old locus tag: Cphy_0104
so part of: sequence
location: complement(139859..141028)
location: region:139859-141028:-1
so has part: feature:139859-141028:-1:exon
subclass of: SO_0000010

position:139859:-1
position: 139859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141028:-1
position: 141028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139859-141028:-1:exon

CPHY_RS00620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00620
old locus tag: Cphy_0104
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005601450.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribose-phosphate pyrophosphokinase
translation: MSQDNFKETLPVGTLGIIALESSQALGQKVNDYIVEWRKKRTGEHTTTMQFAGYQRDSYLIKHQCPRFGSGEAKGLIKESVRGDDLYLLVDVCNYSLTYSLCGHTNHMSPDDHYQDLKRIIAAVGGKARRITVIMPFLYESRQHKRSSRESLDCALALQELTNMGVESIITFDAHDPRVQNAIPLKSFETVMPSYQFIKNLLKNVPDLVVDAKHMMVISPDEGAMGRAVYFANVLGLDMGMFYKRRDYTTIVNGRNPIVAHEFLGADVEGKDVLILDDMISSGESMLDVAKELKKRKAKRIFVCATFGLFTNGLDKFDEAYEQGLIDFVMTTNLVYQTEELLSRPYYINADMSKYVALLIDALNHDASISEFLSPTERIQSVLNKYNNK
SIO_010081: CPHY_RS00620
subclass of: SO_0000673
so part of: CPHY_RS00620
location: complement(139859..141028)
location: region:139859-141028:-1
so has part: feature:139859-141028:-1:exon

WP_012198137.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:139859-141028:-1:exon

CPHY_RS00625
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00625
old locus tag: Cphy_0105
so part of: sequence
location: complement(141256..142260)
location: region:141256-142260:-1
so has part: feature:141256-142260:-1:exon
subclass of: SO_0000010

position:141256:-1
position: 141256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142260:-1
position: 142260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141256-142260:-1:exon

CPHY_RS00625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00625
old locus tag: Cphy_0105
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016286988.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MALKNYQYNTILREYDNRRLQNQYELKKRKEEVYAKIPELTLIDEEIINGSIQSAKLSLSGNETALNHLKERNETLSLKKQELLRKAGYPNHYLTMWYTCPDCMDTGYIENEKCHCFKQAIVDILYHQSNVRDSVQYENFSIFSYDYYADDYYDETTKLTPLENIKRVVTETKKFINQFDTSYQNLLIYGNTGVGKTFLTNCIAKELMDHAHTVIYLTSFQLFEILEKYKFNSAEDMDDIRNQFDYILDCDLLIIDDIGTEMNNTFINSQLYQCINERHLRQNSTVISTNLSFDQLKTNYSERIFSRISSNYLLLKIVGDDIRLQKLLKKHSKS
SIO_010081: CPHY_RS00625
subclass of: SO_0000673
so part of: CPHY_RS00625
location: complement(141256..142260)
location: region:141256-142260:-1
so has part: feature:141256-142260:-1:exon

WP_012198138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:141256-142260:-1:exon

CPHY_RS00630
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00630
old locus tag: Cphy_0106
so part of: sequence
location: complement(142366..143478)
location: region:142366-143478:-1
so has part: feature:142366-143478:-1:exon
subclass of: SO_0000010

position:142366:-1
position: 142366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143478:-1
position: 143478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142366-143478:-1:exon

CPHY_RS00630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00630
old locus tag: Cphy_0106
inference: COORDINATES: protein motif:HMM:TIGR01446.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DnaD domain protein
translation: MSKISFFSTTDAGITVISNRFLDEYMPRANGTFVKIYLYLLRCFQDPSLETSLSYLAEKLDETEKDIERAIRYWEKEQLLIITRAANRQITAITFTFPSNDNLNTEETLPSITQEVMEQTAVTEAAAKEQDNSKATTIHKPNYSEAQIKALTEMEEVKWIMNTVERLLERLLKSTDVQLILFLYESVGFSAELIFYLYEYCVSKNKRSASYIETVAISWAEEGIDTVEKADAATLSYNNNYNSINKAFGLNRAPGTIEKKFMHRWFHEFCFDINIIEEACNRTMLATGKPDFKYADKILENWYKKGVTCDADIVKLDEAHAKQSALSAANKQAASTKQPTANNRFNAFPQRKYSEEDFLSMEQRLLNNRS
SIO_010081: CPHY_RS00630
subclass of: SO_0000673
so part of: CPHY_RS00630
location: complement(142366..143478)
location: region:142366-143478:-1
so has part: feature:142366-143478:-1:exon

WP_012198139.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:142366-143478:-1:exon

CPHY_RS00635
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: murC
locus tag: CPHY_RS00635
old locus tag: Cphy_0107
so part of: sequence
location: complement(143877..145286)
location: region:143877-145286:-1
so has part: feature:143877-145286:-1:exon
subclass of: SO_0000010

position:143877:-1
position: 143877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145286:-1
position: 145286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143877-145286:-1:exon

CPHY_RS00635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: murC
locus tag: CPHY_RS00635
old locus tag: Cphy_0107
EC number: 6.3.2.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198140.1
GO function: GO:0008763 - UDP-N-acetylmuramate-L-alanine ligase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylmuramate--L-alanine ligase
translation: MYHIDFTKPIHVHFIGIGGISMSGLAELLHTKGFTVSGSDAKDSKIVDRLRHLGITIFIGQKAENITEDIDLVVYTAAVKSDNVEYQAVQKHNIPMLDRADFLGQVMLQYKNAIGVSGTHGKTTTTSMVSLMMLEGNFDPTISVGGILDNIEGNIRIGHSENFIVESCEYKNSFLSFNPAHAIILNIEAEHLDFFKDIEDIRTSFHTFAKKLPDYGNLVVWGGIDRYEELIEDLSCNVITYGMFSSEEEREQNKDRYDYAACNVTSDDFGLRSYDLYKHGKFVDRINLAVIGDHNVLNSLAAISLVDTLGGTMSAIKKALLAYKGTERRFERKGVLNGITIVDDYAHHPSEIKATLIAAASYPHKDIWCVFQPHTYTRTKSFFHDFTTALALADKIVLADIYAAREENPGDISSKDIQNELLKIGKEAYYISDFAEIEKFLLEHCTNGDLLITMGAGDVVSIGESLLQK
SIO_010081: CPHY_RS00635
subclass of: SO_0000673
so part of: CPHY_RS00635
location: complement(143877..145286)
location: region:143877-145286:-1
so has part: feature:143877-145286:-1:exon

WP_012198140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:143877-145286:-1:exon

CPHY_RS21105
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS21105
old locus tag: Cphy_0108
pseudo: true
so part of: sequence
location: <145977..146375
location: region:145977-146375:1
so has part: feature:145977-146375:1:exon
subclass of: SO_0000010

position:145977:1
position: 145977
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:146375:1
position: 146375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145977-146375:1:exon

CPHY_RS21105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS21105
old locus tag: Cphy_0108
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008720661.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: glucose-1-phosphate adenylyltransferase subunit GlgD
SIO_010081: CPHY_RS21105
subclass of: SO_0000673
so part of: CPHY_RS21105
location: <145977..146375
location: region:145977-146375:1
so has part: feature:145977-146375:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:145977-146375:1:exon

CPHY_RS00645
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: spoVG
locus tag: CPHY_RS00645
old locus tag: Cphy_0109
so part of: sequence
location: 146427..146708
location: region:146427-146708:1
so has part: feature:146427-146708:1:exon
subclass of: SO_0000010

position:146427:1
position: 146427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146708:1
position: 146708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146427-146708:1:exon

CPHY_RS00645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: spoVG
locus tag: CPHY_RS00645
old locus tag: Cphy_0109
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198141.1
GO process: GO:0030435 - sporulation resulting in formation of a cellular spore [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: septation regulator SpoVG
translation: MQITDVRVRRVSKEGKMKAVVSITLDNEFVVHDIKVIEGEKGLFIAMPSRKAGDGEYRDIAHPINSITRDKIQSIILEKYELAALEGNIEEAE
SIO_010081: CPHY_RS00645
subclass of: SO_0000673
so part of: CPHY_RS00645
location: 146427..146708
location: region:146427-146708:1
so has part: feature:146427-146708:1:exon

WP_012198141.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:146427-146708:1:exon

CPHY_RS20450
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS20450
old locus tag: Cphy_0110
so part of: sequence
location: 147354..148388
location: region:147354-148388:1
so has part: feature:147354-148388:1:exon
subclass of: SO_0000010

position:147354:1
position: 147354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148388:1
position: 148388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147354-148388:1:exon

CPHY_RS20450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS20450
old locus tag: Cphy_0110
EC number: 3.-.-.-
inference: COORDINATES: protein motif:HMM:NF013672.2
GO function: GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polysaccharide deacetylase family protein
translation: MRRRRRRNRKLLYALQISWIVLAITATIVIITQSSKWFGNGDNAEVNAAGTIDNNGEPNGPTDQDSSGDIHTGTPTPEVTITPTVSPEGSGNQAEGDGTGQVTPSITPGVGDNDETTNQGETTTPVDNDDSSASTSNSDRVIDPDKPMVALTFDDGPYPPVTKRILETLEKNDARATFFVMGNRVDTYGDTLKLVHDAGNQIGNHSYSHKDLTKLDQKGIEHEVDYSNELINEKANVGDAYLRPPYGAKSEKVSQYVKVPMIAWCVDTLDWQSRDKNKVFEEVKRSVSDGAIVLMHDLYPSTADAIELIVPWLVKQGYQVVTVEEMFKAKGIELEPGKIYYNAK
SIO_010081: CPHY_RS20450
subclass of: SO_0000673
so part of: CPHY_RS20450
location: 147354..148388
location: region:147354-148388:1
so has part: feature:147354-148388:1:exon

WP_012198142.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147354-148388:1:exon

CPHY_RS00655
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: pth
locus tag: CPHY_RS00655
old locus tag: Cphy_0111
so part of: sequence
location: 148828..149403
location: region:148828-149403:1
so has part: feature:148828-149403:1:exon
subclass of: SO_0000010

position:148828:1
position: 148828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149403:1
position: 149403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148828-149403:1:exon

CPHY_RS00655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: pth
locus tag: CPHY_RS00655
old locus tag: Cphy_0111
EC number: 3.1.1.29
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198143.1
GO function: GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminoacyl-tRNA hydrolase
translation: MYIIIGLGNPTREYEATRHNIGFDAITRLADDNNISLDTKKHKAICGKGMIGGEKVILAKPQTYMNLSGESVRELIDFYKVTKEEIIVIYDDISLDVGQLRIRTKGSAGGHNGIKNIIAHLGSDEFCRIKIGVGDKPKNWDLADYVLARFPKEEEPAIREALEKVSKACETILRDGAKVAMNLFNKKEINT
SIO_010081: CPHY_RS00655
subclass of: SO_0000673
so part of: CPHY_RS00655
location: 148828..149403
location: region:148828-149403:1
so has part: feature:148828-149403:1:exon

WP_012198143.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:148828-149403:1:exon

CPHY_RS00660
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: mfd
locus tag: CPHY_RS00660
old locus tag: Cphy_0112
so part of: sequence
location: 149444..152983
location: region:149444-152983:1
so has part: feature:149444-152983:1:exon
subclass of: SO_0000010

position:149444:1
position: 149444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152983:1
position: 152983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149444-152983:1:exon

CPHY_RS00660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: mfd
locus tag: CPHY_RS00660
old locus tag: Cphy_0112
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016292843.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003690 - double-stranded DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription-repair coupling factor
translation: MKTFTAPLQEYREFQVIEQSIQKNQFPLLITGCIDSQKCHLIHALSEGIVCKLVITYNDIKAKEIYEDLKLYDRNVYLYPAKDIIFYSADIHGNAIVRERMRILKNLLERKPMTVVATIDGGMDKLLPLDYLSDKIICIKEDSTIEIECLSEKLIHLGYERQGQVENPGEFAIRGGIIDIYPLTEEAPYRIELWGDEVDSIRTFDVGSQRSIERVSTAVIYPASEIILEPEALKNGLHKLNIEQKEYVGKLRGELKTEEAARIHQIVEEFKENLECLQGSLNLDSYIRFFYDKTCSFFDYFANDSSIIFADEPNRLAEKGEAVFTEFSESMVGRIEKGYILPSQMDVIYDYKELLANLSRRNSVLISTMDHKVMQLAAKKKVDITVKSVNPYNNNFEILIKDLQNWKRNGYRVILLSGSRTRAARLAQDLRDNELPAIYSEDVDRIPVKGEIVVMHGSVHRGFEYPLIKLVIISESDIFGAEKKKKKKKPSYEGKQIQSFTDLNIGDYVVHENHGLGIYRGIEKIEVDKVSKDYIKLEYGGGGVLYILATGLDVIQKYAGADARKPKLNKLNSVEWKNTKAKVKGAVKEIAKELVELYATRQAKAGHSFCEDTVWQREFEEMFPYEETDDQLRAIDDTKRDMESKKIMDRLICGDVGYGKTEIAIRAAFKAISDGKQVVFLVPTTILAQQHYNTFSQRMMNFPISVDMLCRFKTPAQQKKTLENLKKGQLDILIGTHRVLSKDIQFKNLGLLIIDEEQRFGVTHKEKIKQMKGDIDVLTLTATPIPRTLHMSLVGIRDMSVLEEPPVDRLPIQTFVLEHNDEIIREAINRELARGGQVYYVHNRVNGLDEITNTIARLVPDANVAFAHGQMHEHQLEKIMFEFINGEIDVLVSTTIIETGLDISNVNTMIIDNADQLGLSQLYQLRGRVGRSNRTSFAFLMYKRDKLLKEVAEKRLQAIKEFTELGSGFKIAMRDLEIRGAGNLLGAQQSGHMEAVGYDLYCKMLNDAVKGLKGEISDEDTFDTSIDMDMDAFIPSTYIKNEMQKLDMYKRIAGIENEEEFMDMQEEMLDRFGDIPTSVNNLLNIALLKSMAHQVYVSNLVQKGTEVKLSMYPKAKIKVEMIPELLLKVGNNLKMIPGATPFFTYHMANVIKNPKVGTIDTLAVFESVKNLLLEFQILV
SIO_010081: CPHY_RS00660
subclass of: SO_0000673
so part of: CPHY_RS00660
location: 149444..152983
location: region:149444-152983:1
so has part: feature:149444-152983:1:exon

WP_012198144.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:149444-152983:1:exon

CPHY_RS00665
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00665
old locus tag: Cphy_0113
so part of: sequence
location: 153135..154184
location: region:153135-154184:1
so has part: feature:153135-154184:1:exon
subclass of: SO_0000010

position:153135:1
position: 153135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154184:1
position: 154184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153135-154184:1:exon

CPHY_RS00665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00665
old locus tag: Cphy_0113
inference: COORDINATES: protein motif:HMM:NF024545.2
GO function: GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptidyl-prolyl cis-trans isomerase
translation: MKKIKRIGTIVLALTLATSLWACSKNKGSDVTNEDGITVVPEVPAQEKQGKTVLTVNNLTVSYEEAVLYLQSRKEEIEELYGKDVWSLVVDEDGTTYEQLLKDSVYEEIEYLMLVCSKAEELGITLSEDELLDADEFTADFTSNFSPEALDYYNVNKGVVNKIYRDNMLANKIYESLTLNVDTEVSDELARQAVFQYILVGKYGYDANGNRIEYTKEQLEESKTRAYKLREEALDAKNFYDFAAANSDDENEVEITVGKGDMKENLEKVAFALDEGEISDVIDTADGYFIFRCVSLLDRNATDSKKEDIIIKRQEEAFDVEYNKWQGEKEVKLNKEIWNSIDITGELVK
SIO_010081: CPHY_RS00665
subclass of: SO_0000673
so part of: CPHY_RS00665
location: 153135..154184
location: region:153135-154184:1
so has part: feature:153135-154184:1:exon

WP_157668634.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:153135-154184:1:exon

CPHY_RS00670
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00670
old locus tag: Cphy_0114
so part of: sequence
location: 154273..155049
location: region:154273-155049:1
so has part: feature:154273-155049:1:exon
subclass of: SO_0000010

position:154273:1
position: 154273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155049:1
position: 155049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154273-155049:1:exon

CPHY_RS00670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00670
old locus tag: Cphy_0114
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004614728.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MIEINHLTKIYKLTKRQMRQLKTKENLKCAVDNVSLTAKQGEIYGLLGPNGAGKTTTLRCVATLLKPTKGFIKVNGFDTITQSKNVRESISFLTNEIKLDPQFSAKYMFHFFANLHGVPEKESIERREKLFHYFGITPFQDKKIEELSTGMKQKAAIAVSLAHDPKIIIFDEPTTGLDIVTARSVTDYLKELKNEGKLIIISTHIMSEAEKLCDRIGIIIQGRKVMEGTLSEILKETKTNDLEDAFFQLYQTYIKEEA
SIO_010081: CPHY_RS00670
subclass of: SO_0000673
so part of: CPHY_RS00670
location: 154273..155049
location: region:154273-155049:1
so has part: feature:154273-155049:1:exon

WP_012198146.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:154273-155049:1:exon

CPHY_RS00675
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00675
old locus tag: Cphy_0115
so part of: sequence
location: 155051..156268
location: region:155051-156268:1
so has part: feature:155051-156268:1:exon
subclass of: SO_0000010

position:155051:1
position: 155051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156268:1
position: 156268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155051-156268:1:exon

CPHY_RS00675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00675
old locus tag: Cphy_0115
inference: COORDINATES: protein motif:HMM:NF024091.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MKGANIIFKKEMKRIFQDKKMIFSLFILPAIIIIGMYSLIGVMMNRMVDDIKKHESIVYIQNMPKEYESLLKTSGFLEVAKVTYLTKESSVKEYENKILKESIDLLVSFENNFNNSVASYEKSGDVIPKVTLFYNTTGKYSTEAESNFRTLVLEPLQQQLLAKRLGNLEVLQVFQIAEKVIVDADKQNGQFLAMLLPYMITFMLFVGAMSLGVDAITGEKERQTMAKLLLTPINRSEIVLGKLSSLAVLSSISAVVYAISMIIAMPMMEGNMGSQGGAISVRFGVTQVVALFITMIVMVYLYVGLVALVSVFAKTAKEASSYISPLYIVIIVAGMLTMFQGGIEKPLYHYAIPVYGNSLAIQNIMTNELTLAQFLISSCSTLILAILVTIAIAKAFNNEKIMFNA
SIO_010081: CPHY_RS00675
subclass of: SO_0000673
so part of: CPHY_RS00675
location: 155051..156268
location: region:155051-156268:1
so has part: feature:155051-156268:1:exon

WP_012198147.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:155051-156268:1:exon

CPHY_RS00680
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00680
old locus tag: Cphy_0116
so part of: sequence
location: 156392..156760
location: region:156392-156760:1
so has part: feature:156392-156760:1:exon
subclass of: SO_0000010

position:156392:1
position: 156392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156760:1
position: 156760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156392-156760:1:exon

CPHY_RS00680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00680
old locus tag: Cphy_0116
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002576194.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metalloregulator ArsR/SmtB family transcription factor
translation: MPLEQSQLHNHDGSLTKLLHDIPQEHEFLMAAEVFNQLSDGTRLRILWLLCHSEECVNDIAAAVRMTAPAVSHHLKTLKQNGIIKSRRLGKEVLYTLEDTPKAILIHKMVDSIFEINCHTSR
SIO_010081: CPHY_RS00680
subclass of: SO_0000673
so part of: CPHY_RS00680
location: 156392..156760
location: region:156392-156760:1
so has part: feature:156392-156760:1:exon

WP_041703818.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:156392-156760:1:exon

CPHY_RS00685
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00685
old locus tag: Cphy_0117
so part of: sequence
location: 156810..157454
location: region:156810-157454:1
so has part: feature:156810-157454:1:exon
subclass of: SO_0000010

position:156810:1
position: 156810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157454:1
position: 157454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156810-157454:1:exon

CPHY_RS00685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00685
old locus tag: Cphy_0117
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013273791.1
GO function: GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO process: GO:0006813 - potassium ion transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrkA C-terminal domain-containing protein
translation: MEEQRKNKNAIPRYQQIAVEIASRIASEEYKVGDKIYARSSIAGQYGVSPETARRAICVLCDLEIVTSEKGSGVTIKSTENAIKFIKQYNKRQTIDTIKDNIQQSIIRQRTEMEVMNQHLTELISASEHFRSLNPFMPFEILITKECVFLGKTVAELQFWQHTGATVIAIRRGDETMVSPGPYTHIKEHDILYFITQDDAPYRVKIFLYPNTTE
SIO_010081: CPHY_RS00685
subclass of: SO_0000673
so part of: CPHY_RS00685
location: 156810..157454
location: region:156810-157454:1
so has part: feature:156810-157454:1:exon

WP_012198149.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:156810-157454:1:exon

CPHY_RS00690
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00690
old locus tag: Cphy_0118
so part of: sequence
location: 158002..159138
location: region:158002-159138:1
so has part: feature:158002-159138:1:exon
subclass of: SO_0000010

position:158002:1
position: 158002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159138:1
position: 159138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158002-159138:1:exon

CPHY_RS00690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00690
old locus tag: Cphy_0118
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003371653.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MIKFTNITKSFKSNKILKDVTFNIDTGNLVAIIGESGCGKTTLLKMINRLIKPTSGSISIDGEDILSLDEVSLRRKIGYVIQQTGLFPHMTIKENIEIIPKILKVDSAEIMENTKKLMNMVGLDYENFIDRYPSELSGGQQQRVGVARAFANNPDIILMDEPFSALDPMTRSDLQDELVELQSKLKKTIVFVTHDMDEAIKIADKICIMREGRVLQYDTPENILKNPVDDYVSNFVGKNRIWSSPEFIKVHDFMMNKPVTATKDLSILKCIDKMRQKKVDSLLIINPDNHHLHGILKASQIRSIGDRTQSAENFMVTDFPTLNPDNTIVDALKLVTEQKVSTIPVTKEDGYLVGLVTRGNLVTTLSQQYYNGDEEVDV
SIO_010081: CPHY_RS00690
subclass of: SO_0000673
so part of: CPHY_RS00690
location: 158002..159138
location: region:158002-159138:1
so has part: feature:158002-159138:1:exon

WP_012198150.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:158002-159138:1:exon

CPHY_RS00695
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00695
old locus tag: Cphy_0119
so part of: sequence
location: 159135..160706
location: region:159135-160706:1
so has part: feature:159135-160706:1:exon
subclass of: SO_0000010

position:159135:1
position: 159135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160706:1
position: 160706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159135-160706:1:exon

CPHY_RS00695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00695
old locus tag: Cphy_0119
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017212947.1
GO component: GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycine betaine ABC transporter substrate-binding protein
translation: MNFIEYITNNYEQILRLLLEHIKLTAISVGFAILIGVPLGILISYAKRVSKPILMVANIIQAIPSMALLGFMIPFLGIGMVPAIVAVILYSLLPIIKNTYTGIDNINPQTLEAAKGIGLTPFQVLTKVQIPLALPVIMAGVRIASVTAVGLMTMAAFIGAGGLGHLVFSGIRTVNNNQILAGAIPACLLALLVDFLLGLVEQLVAPISLQKGENNVKKKKRGIQKGILAGAVFAIIAIFVFTAKGTNANNQKVITIGSKDFTEQAILGNLVADLIEGNTDIKVNRKLDLGGTQVCFSALNKGEIDMYVEYSGTAYLSALGHTEKKDKDQVFDIVKDEFKSKYNIDVLKQMNFNNTYALAVTKEAAAKYQLKNISDLAKIAQTMKSGTTFEFLNREDGLPGLQKEYGFTIGETVAIDGAPRYTALVNKDVDIIDAFTTDGLLKKFGLAVLEDDKAFFPPYYAMPIVRSESLEQHPEIIPLLEELGDVLTNDIMLELNYQVDELQKSPEAVAKEFLKNQNLIPSK
SIO_010081: CPHY_RS00695
subclass of: SO_0000673
so part of: CPHY_RS00695
location: 159135..160706
location: region:159135-160706:1
so has part: feature:159135-160706:1:exon

WP_012198151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:159135-160706:1:exon

CPHY_RS00700
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00700
old locus tag: Cphy_0120
so part of: sequence
location: 161160..161375
location: region:161160-161375:1
so has part: feature:161160-161375:1:exon
subclass of: SO_0000010

position:161160:1
position: 161160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161375:1
position: 161375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161160-161375:1:exon

CPHY_RS00700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00700
old locus tag: Cphy_0120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015261621.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cation transporter
translation: MKKVVKLENLDCANCAAKMEDGISKIAGVEKVTVSFLMQKMTIVASEEQMEDILNQAEKIIHKLEPDVVIK
SIO_010081: CPHY_RS00700
subclass of: SO_0000673
so part of: CPHY_RS00700
location: 161160..161375
location: region:161160-161375:1
so has part: feature:161160-161375:1:exon

WP_012198152.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:161160-161375:1:exon

CPHY_RS00705
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00705
old locus tag: Cphy_0121
so part of: sequence
location: 161468..163318
location: region:161468-163318:1
so has part: feature:161468-163318:1:exon
subclass of: SO_0000010

position:161468:1
position: 161468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163318:1
position: 163318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161468-163318:1:exon

CPHY_RS00705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00705
old locus tag: Cphy_0121
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004619684.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heavy metal translocating P-type ATPase
translation: MKKHKKNLIRIIISTAIFLLAILLPLPKIVTLILYIAAYLLIGYDVLWNAFRNVIRGHVLDENFLMSIATIGAFAIAKYDESIFVMLFYQVGELFQSYAVAQSRKSITALMDIRPDYANLVKDGEIQVVDPEEVMPGDHILIKPGEKIPLDGKIVVGQTSINTSALTGESLPRESSVGDEVISGCINLNGTIEVEVTKEFEESTVSKILELVESASDRKAKSEAFITKFAKYYTPTVVIFAVLLAVIPPIFVPGALFSDWLYRALIFLVVSCPCALVISIPLGFFGGIGGASKKGILIKGSNYLESLSKVTAIAFDKTGTLTKGNFVVHDIVTDSLSKDELLEVAALAESHSSHPIATSIREAFGKELSMDRIREVQEVAGFGISAIVDGKQVFAGNRKMMAEQNIEVKQLSENIPIGTTIHIAIDGNYAGYLEIRDEIKSTSKAAIEDLRHSGVHSLVMLTGDAKVVGEAIAKELNLDHAYTELLPADKVEKFEEMLAKRGEKDQLAFVGDGINDAPVLARADIGIAMGGLGSDAAIEAADVVIMDDDPEKLVTAIRIARKTLRIVKQNIIFALAVKGIILILGAAGLSNMWEAVFADVGVSVIAILNSIRALKE
SIO_010081: CPHY_RS00705
subclass of: SO_0000673
so part of: CPHY_RS00705
location: 161468..163318
location: region:161468-163318:1
so has part: feature:161468-163318:1:exon

WP_012198153.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:161468-163318:1:exon

CPHY_RS00710
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00710
old locus tag: Cphy_0122
so part of: sequence
location: 163702..164154
location: region:163702-164154:1
so has part: feature:163702-164154:1:exon
subclass of: SO_0000010

position:163702:1
position: 163702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164154:1
position: 164154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163702-164154:1:exon

CPHY_RS00710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00710
old locus tag: Cphy_0122
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015390838.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 8-oxo-dGTP diphosphatase
translation: MSRSEKAVFTNLCMITNGDEILVQERKNRDWPGVTFPGGHVEENESFVKSVIREVKEETGLSIKNPILCGIKQFQTRKKERYVVLFYKTDQFEGKLTSSDEGEVFFIPRTDLNKYVLAEDFDLMLKVFESEDLSECIYQKSGDEWVLELL
SIO_010081: CPHY_RS00710
subclass of: SO_0000673
so part of: CPHY_RS00710
location: 163702..164154
location: region:163702-164154:1
so has part: feature:163702-164154:1:exon

WP_012198154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:163702-164154:1:exon

CPHY_RS00715
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00715
old locus tag: Cphy_0123
so part of: sequence
location: 164245..165132
location: region:164245-165132:1
so has part: feature:164245-165132:1:exon
subclass of: SO_0000010

position:164245:1
position: 164245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165132:1
position: 165132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164245-165132:1:exon

CPHY_RS00715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00715
old locus tag: Cphy_0123
EC number: 1.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004616530.1
GO function: GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha-hydroxy acid oxidase
translation: MENLRTGDSNQITRDYFDSLLVEMRHIDSVIPSTTLELYGERFDTPVMMAALSHLNKVRENGMVEMARGAYLANAVNWAGMGEEEELEAITATGAKTIKIIKPYADNKIIFRKIKHAQKCGALAVGMDVDHSFSGNGKYDNVLGHPMTSKSLDEIKEFVKSTDLPFIIKGVLSEQDALKCLEAGVKGIVVSHHHGIMNYAIPPLKILPRIAAIVNKQIPIFVDCGVASGMDVFKALALGATAVSAGRIIMDPLSKDGANGVKDTIIRMTEELAGVMARTCSCDMKHIDPSVIHNK
SIO_010081: CPHY_RS00715
subclass of: SO_0000673
so part of: CPHY_RS00715
location: 164245..165132
location: region:164245-165132:1
so has part: feature:164245-165132:1:exon

WP_012198155.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:164245-165132:1:exon

CPHY_RS00720
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00720
old locus tag: Cphy_0124
so part of: sequence
location: 165343..166179
location: region:165343-166179:1
so has part: feature:165343-166179:1:exon
subclass of: SO_0000010

position:165343:1
position: 165343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166179:1
position: 166179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165343-166179:1:exon

CPHY_RS00720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00720
old locus tag: Cphy_0124
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014254217.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sugar phosphate isomerase/epimerase family protein
translation: MRIGGGLEKPYSNPEEWYQLVKELGYRAVLSPIDYRASQDEKKAYQQCVKEHDLIIGEVGAWKNAIAFDELERKEALTFCKNQLALAEELGANCCVNISGSRGELWDGCYKENYQSDTYALAVDSIREIIDAVKPTRTFYTIEPMPWMVPDSPDEYLKLIDDVDRKAFGVHLDFVNMINCPKRYVYHEEFIKECFEKLGPMIKSIHGKDVWMENKYTTLIHETMPGKGILNYQLITRLCEQLGPDTTLFVEHLPDFDSYKQAAGYVRQQAVLAGVSLP
SIO_010081: CPHY_RS00720
subclass of: SO_0000673
so part of: CPHY_RS00720
location: 165343..166179
location: region:165343-166179:1
so has part: feature:165343-166179:1:exon

WP_012198156.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:165343-166179:1:exon

CPHY_RS00725
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00725
old locus tag: Cphy_0125
so part of: sequence
location: complement(166419..168566)
location: region:166419-168566:-1
so has part: feature:166419-168566:-1:exon
subclass of: SO_0000010

position:166419:-1
position: 166419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168566:-1
position: 168566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166419-168566:-1:exon

CPHY_RS00725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00725
old locus tag: Cphy_0125
inference: COORDINATES: protein motif:HMM:NF013080.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LTA synthase family protein
translation: MKFIPQKAKSILDSVKTKCKKPFLQCVLLALALNIFVEIMSRRSVFKAIAYLFTSPHVFIYNTFIILVTLSIALFFKRRWFVYYLVSLSWVAIGVTDFILLKFRTTPFTAVDITLMKSATQIWQYYLKWFHLVFIAIGLALTVFSCVIVWKKVKRYDNRLPLLKITIFFATTLISSTLLTKLGLKTNVLAGNFGNLANAYHQYGLPYCFVNSVINTGINKPNIYTTDVVNTIVEGVEQGKIVSSSDILPTEVPEPSETPSPIPTLTPTPPVDLSTSTSDTVASKETPNIIFLQLESFFDPTHIKGVTFTEDPIPNYRALKEKFSSGYLSVPSVGAGTANTEFEVITGMNLDFFGPGEYPYKTILQKTSCESISYNLKSLGYTTHAIHNNVATFYDRVSVFSQLGFDTFTSIEYMQDIERNQNNWAKDKVLTPEILQILNTTKNQDLIYAISVQGHGSYPDSALIENPRINLTLSEDLSDSLYYPLLYYSNQIKEMDEFIGELIESLSNRKEETILVMYGDHLPGFQLEETDLTNGSLFQTEYIVWDNFGMTKQNEDLEAYQLSAHVLDLLDIHNGLITKLHQTQKDSDIYLDELKVLEYDMLYGDLDCFNGVNPYTKTDLQMGTVPIKISEAHFVSAPPEGEATGDDSARVIVTGSNFTPFSKISVNDKIYDTKFINRSMISAPINELKSGDVITVIQSGNDNVPLSSTDSYVIP
SIO_010081: CPHY_RS00725
subclass of: SO_0000673
so part of: CPHY_RS00725
location: complement(166419..168566)
location: region:166419-168566:-1
so has part: feature:166419-168566:-1:exon

WP_012198157.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:166419-168566:-1:exon

CPHY_RS00730
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: truA
locus tag: CPHY_RS00730
old locus tag: Cphy_0126
so part of: sequence
location: 169161..169955
location: region:169161-169955:1
so has part: feature:169161-169955:1:exon
subclass of: SO_0000010

position:169161:1
position: 169161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169955:1
position: 169955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169161-169955:1:exon

CPHY_RS00730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: truA
locus tag: CPHY_RS00730
old locus tag: Cphy_0126
EC number: 5.4.99.12
inference: COORDINATES: protein motif:HMM:TIGR00071.1
GO function: GO:0009982 - pseudouridine synthase activity [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA pseudouridine(38-40) synthase TruA
translation: MPGEMDRKRNIKLIISYDGTNYSGWQRIPKAANGDHSIQGLLEEFLSKVLLEPIKLIGSGRTDTGVHALGQVANFYSRSNLDVNIIRQKMNQVLPEDIKILQANEVDLNFHSRFDAVEKIYQYIIDTKERESVFFRKYSYSCGKDLDIEAMRQAAKLLIGTMDYKSFCTDRKDGKSTIRTISEITIEELRQNRNQQGIIFTFRGNGFLHHMIRIISGTLLEVGTQERSVESVRQAILGKKREYAGITLYPQGLFLKQVIYDKNS
SIO_010081: CPHY_RS00730
subclass of: SO_0000673
so part of: CPHY_RS00730
location: 169161..169955
location: region:169161-169955:1
so has part: feature:169161-169955:1:exon

WP_012198158.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:169161-169955:1:exon

CPHY_RS00735
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: spoVT
locus tag: CPHY_RS00735
old locus tag: Cphy_0127
so part of: sequence
location: 170160..170705
location: region:170160-170705:1
so has part: feature:170160-170705:1:exon
subclass of: SO_0000010

position:170160:1
position: 170160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170705:1
position: 170705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170160-170705:1:exon

CPHY_RS00735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: spoVT
locus tag: CPHY_RS00735
old locus tag: Cphy_0127
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015552339.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0030436 - asexual sporulation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: stage V sporulation protein T
translation: MKATGIVRRIDDLGRVVIPKEIRRTLRIREGDPLEIFTDREGEIILKKYSPIGELGQFAKQYADSIGHTTGHIVAITDKDQFIAIAGSAKKDWVTKPISKELEALINDRETVTAAKEEKGFIRVCSDDEDIAYEVISPIICEGDAIGAVLILTRDVKTKLGEVENKLAATAAAFLGRQMEN
SIO_010081: CPHY_RS00735
subclass of: SO_0000673
so part of: CPHY_RS00735
location: 170160..170705
location: region:170160-170705:1
so has part: feature:170160-170705:1:exon

WP_012198159.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:170160-170705:1:exon

CPHY_RS00740
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00740
old locus tag: Cphy_0128
so part of: sequence
location: 170950..172281
location: region:170950-172281:1
so has part: feature:170950-172281:1:exon
subclass of: SO_0000010

position:170950:1
position: 170950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172281:1
position: 172281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170950-172281:1:exon

CPHY_RS00740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00740
old locus tag: Cphy_0128
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016207535.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: APC family permease
translation: MQEKRYGLLTAITMITGIVIGSGIFFKSDDVLRYTNGNMLLGILVFLIAALAIVFGSLTISQLASRTDEPGGLISYAEKFVNKRTAGAIGWFQLTMYFAPLVGVITWVSGLYFCQLFGIESTPKNSSLIGFIILCMIFILNILSARLGGAFQNLSMIVKLIPLILIALAGLFFGKAPEIIAKDASVMKEAIASPGWVAAFAPIAFSFDGWSISTTICHEIKNSKRNLPLALIFAPLIVLLCYVLYFVGITSLVSVDTVMQQGNESTYLAATKVFGNMGARLILVFVLISVVGTLNGLVLAYIQLPYSLAYRGMLPCSNALKKQSEKLNGIPINSAILAFVLSSVWVFINYLTQNANMIGDVSEVPICLSYLMFIILYITVMKLKKQGEIKSIFMGYVAPVLAIIGSLIIVTGTLSHPFFWIFAVLGAIVAACGFWYTKKFSVS
SIO_010081: CPHY_RS00740
subclass of: SO_0000673
so part of: CPHY_RS00740
location: 170950..172281
location: region:170950-172281:1
so has part: feature:170950-172281:1:exon

WP_012198160.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:170950-172281:1:exon

CPHY_RS00745
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00745
old locus tag: Cphy_0129
so part of: sequence
location: 172472..172795
location: region:172472-172795:1
so has part: feature:172472-172795:1:exon
subclass of: SO_0000010

position:172472:1
position: 172472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172795:1
position: 172795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172472-172795:1:exon

CPHY_RS00745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00745
old locus tag: Cphy_0129
EC number: 2.1.1.63
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006858879.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003908 - methylated-DNA-[protein]-cysteine S-methyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MGMT family protein
translation: MEELTTFQRIYEVVKEIPYGKVATYGQVAALAGNRHLAKVVGYALHVNPNPVIIPCYRVVNAKGEVSKAFAFGGVNRQIELLEKEGVQFLEDGSVDMEVSRWAKLVF
SIO_010081: CPHY_RS00745
subclass of: SO_0000673
so part of: CPHY_RS00745
location: 172472..172795
location: region:172472-172795:1
so has part: feature:172472-172795:1:exon

WP_012198161.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:172472-172795:1:exon

CPHY_RS00750
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00750
old locus tag: Cphy_0130
so part of: sequence
location: 172888..173892
location: region:172888-173892:1
so has part: feature:172888-173892:1:exon
subclass of: SO_0000010

position:172888:1
position: 172888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173892:1
position: 173892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172888-173892:1:exon

CPHY_RS00750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00750
old locus tag: Cphy_0130
inference: COORDINATES: protein motif:HMM:NF013862.2
GO process: GO:0006629 - lipid metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: patatin-like phospholipase family protein
translation: MSKKKVLAIDGGGMKGIVSAVLLRSLEDRLQYHSNNYKARIADYFDLIAGTSTGSILTALYLFPNERGESKFSAKEVLESYYEYGEYIFKRQKFYPFWGPKYTNKYLEEMLLKYFGDATLGSLRKPCLMTSYDTTTRSAVFFNSVTGRKDENRNYLLRDAILASTAAPTYFPPSCFHAKDNCYNCLIDGGVFANNPTLCALIEAMKLPGCDGIGDTICLSVGNVKNTKSYTYQKVRRFGLLQWAVPIFDILMDASEQTVDYQLKKIYKSVNHQQYYYRMVLNTEEEIPKMDDCSKEAVHKLTLYGEKLANREKYRIDELAKRLVMEKDNDNFVF
SIO_010081: CPHY_RS00750
subclass of: SO_0000673
so part of: CPHY_RS00750
location: 172888..173892
location: region:172888-173892:1
so has part: feature:172888-173892:1:exon

WP_012198162.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:172888-173892:1:exon

CPHY_RS00755
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00755
old locus tag: Cphy_0131
so part of: sequence
location: 174425..176359
location: region:174425-176359:1
so has part: feature:174425-176359:1:exon
subclass of: SO_0000010

position:174425:1
position: 174425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176359:1
position: 176359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174425-176359:1:exon

CPHY_RS00755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00755
old locus tag: Cphy_0131
inference: COORDINATES: protein motif:HMM:NF025620.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbohydrate-binding domain-containing protein
translation: MKNSHTIYLEISIILVAIFLFGCSNVSSNKSDYEGMAENQKQSSEDNISKDILKNTGESLSAANMSGNLIEDGLSFESADYYKDYNERKVNYIQLNDSSIIFSGEGAFVSDNKISISKPGTYVIFGTLKDGQIVVEETAGGMVHLILKNASIHCENSAPIYIKEAGKVVISIAPGTKNMLTDDLANHDSKLSDPNATIYCTADLTLNGAGSLVINAAYQNAISSKGVLKVVEGDYDIHAVGHGIIGKEAVLIDDSRIKIDSGRDGIRTNNDTEDSKGLIFINRGEFVINSKQDGIQADKRLVIQNGSFQIITGGGSTGSVEKEDKEELLLNDLMEITEYDNSMSAKGLKSGEDILIGNGSFTLDSADDTIYSDGNISIENGSFTIASGGDGMHADASLTIAKAKIALTSSNYGMEGSKVEIKSGSLNIVSSEDGIHVSGNLNSNKDNGDKEEDTFIEEKGILFLSGGNVMISAGGDGINSRGLATMTGGTLIIEGSPSNANGAIVFNGVFDISGGTLLAIGSSGTTMAPSITSKQSSILLNLEETVEGETVLCLLEGEDRVPVMAYLPTKSYQSIVYSSPLLLEGKSYTLSTGGDTTPKEGMNLYTPKTYEDGIDNANVTINGTVTTYGEVKAPIKLPSEGIIE
SIO_010081: CPHY_RS00755
subclass of: SO_0000673
so part of: CPHY_RS00755
location: 174425..176359
location: region:174425-176359:1
so has part: feature:174425-176359:1:exon

WP_012198163.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:174425-176359:1:exon

CPHY_RS00760
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00760
old locus tag: Cphy_0132
so part of: sequence
location: 176379..177092
location: region:176379-177092:1
so has part: feature:176379-177092:1:exon
subclass of: SO_0000010

position:176379:1
position: 176379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177092:1
position: 177092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176379-177092:1:exon

CPHY_RS00760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00760
old locus tag: Cphy_0132
inference: COORDINATES: protein motif:HMM:TIGR00444.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MazG family protein
translation: MKPEYDFEQFCDIIEKLRSENGCPWDREQTHDSLKNCMIEEAYEVVDGINQFTKNGDYDNLREELGDVLLQVIMHSQIAKEAGRFTVEDVIDEIAKKMVRRHPHVFGDVQVKDSEGVLTNWEEIKKEEKKGKAVESNPLYVPSSFPALLRAQKIVKKSNKFRNTVYTKEELFSQMNSEATRLQALCHEGASIEKQEEAYGALLYTMSAIGLAFNMDAESCLTEKIKEEISKLESKIG
SIO_010081: CPHY_RS00760
subclass of: SO_0000673
so part of: CPHY_RS00760
location: 176379..177092
location: region:176379-177092:1
so has part: feature:176379-177092:1:exon

WP_012198164.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:176379-177092:1:exon

CPHY_RS00765
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00765
old locus tag: Cphy_0133
so part of: sequence
location: 177506..177781
location: region:177506-177781:1
so has part: feature:177506-177781:1:exon
subclass of: SO_0000010

position:177506:1
position: 177506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177781:1
position: 177781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177506-177781:1:exon

CPHY_RS00765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00765
old locus tag: Cphy_0133
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004054731.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0030261 - chromosome condensation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HU family DNA-binding protein
translation: MNKAELVAAIAEKTELSKKDSEKALKAFIDVVTEELTKGEKVQLVGFGTFEVSARPARTGRNPQTKQTITIAASKAPKFKAGKALKDVINK
SIO_010081: CPHY_RS00765
subclass of: SO_0000673
so part of: CPHY_RS00765
location: 177506..177781
location: region:177506-177781:1
so has part: feature:177506-177781:1:exon

WP_012198165.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:177506-177781:1:exon

CPHY_RS00770
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00770
old locus tag: Cphy_0134
so part of: sequence
location: 177952..178191
location: region:177952-178191:1
so has part: feature:177952-178191:1:exon
subclass of: SO_0000010

position:177952:1
position: 177952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178191:1
position: 178191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177952-178191:1:exon

CPHY_RS00770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00770
old locus tag: Cphy_0134
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002605178.1
GO function: GO:0003723 - RNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA-binding S4 domain-containing protein
translation: MRLDKYLKVSRLIKRRTVANDACDAGRVLINDKPAKASTNVKVGDIIEIGFGSKAVRVEVLDVQETTRKDDAKELYKYL
SIO_010081: CPHY_RS00770
subclass of: SO_0000673
so part of: CPHY_RS00770
location: 177952..178191
location: region:177952-178191:1
so has part: feature:177952-178191:1:exon

WP_012198166.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:177952-178191:1:exon

CPHY_RS00775
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: yabP
locus tag: CPHY_RS00775
old locus tag: Cphy_0135
so part of: sequence
location: 178292..178576
location: region:178292-178576:1
so has part: feature:178292-178576:1:exon
subclass of: SO_0000010

position:178292:1
position: 178292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178576:1
position: 178576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178292-178576:1:exon

CPHY_RS00775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: yabP
locus tag: CPHY_RS00775
old locus tag: Cphy_0135
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003504842.1
GO component: GO:0005575 - cellular_component [Evidence IEA]
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0030436 - asexual sporulation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sporulation protein YabP
translation: MEDSKQVRKNQLNLNDRKEALITGVRDVRSFDDHEIILETDLGILMIRGSDLHMGRLTLEKGEVDVTGRMDSFVYSELKGFTKSGESVFKRLFK
SIO_010081: CPHY_RS00775
subclass of: SO_0000673
so part of: CPHY_RS00775
location: 178292..178576
location: region:178292-178576:1
so has part: feature:178292-178576:1:exon

WP_012198167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:178292-178576:1:exon

CPHY_RS00780
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00780
old locus tag: Cphy_0136
so part of: sequence
location: 178591..179220
location: region:178591-179220:1
so has part: feature:178591-179220:1:exon
subclass of: SO_0000010

position:178591:1
position: 178591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179220:1
position: 179220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178591-179220:1:exon

CPHY_RS00780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00780
old locus tag: Cphy_0136
inference: COORDINATES: protein motif:HMM:NF021118.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: spore cortex biosynthesis protein YabQ
translation: MNTSIFLELRYLAAASYWGIILFLIYDLLRILRNTFHHGKIVIGIQDICFWIVAGILIFRMMYLQNDGMIRWYSTVAMVLSMVLYQKIFSPLIVGGGTKFTLFIKNCILRLLKLLVSPIMFIISKIKKLFRFLFGKVRKFGRFLGGKVKKRTNIFKACIRKQLKKHLNKVKIKKRKQVEEAPPPKVERPRGVLELITQPQEKGEVSEKE
SIO_010081: CPHY_RS00780
subclass of: SO_0000673
so part of: CPHY_RS00780
location: 178591..179220
location: region:178591-179220:1
so has part: feature:178591-179220:1:exon

WP_041703036.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:178591-179220:1:exon

CPHY_RS00785
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00785
old locus tag: Cphy_0137
so part of: sequence
location: 179207..179506
location: region:179207-179506:1
so has part: feature:179207-179506:1:exon
subclass of: SO_0000010

position:179207:1
position: 179207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179506:1
position: 179506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179207-179506:1:exon

CPHY_RS00785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00785
old locus tag: Cphy_0137
inference: COORDINATES: protein motif:HMM:NF016839.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: septum formation initiator family protein
translation: MRRNKKRRNGLRLIGLMVMIICFVVLYKSTELKSEANAKVQKKAELEQLISDENDRTKEIEERKLYPGTKKYIEDVARSQLGLVYPDEIIFEPEKENKK
SIO_010081: CPHY_RS00785
subclass of: SO_0000673
so part of: CPHY_RS00785
location: 179207..179506
location: region:179207-179506:1
so has part: feature:179207-179506:1:exon

WP_041703039.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:179207-179506:1:exon

CPHY_RS00790
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00790
old locus tag: Cphy_R0020
so part of: sequence
location: 179651..179724
location: region:179651-179724:1
so has part: feature:179651-179724:1:exon
subclass of: SO_0000663

position:179651:1
position: 179651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179724:1
position: 179724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179651-179724:1:exon

CPHY_RS00790
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 357809
locus tag: CPHY_RS00790
old locus tag: Cphy_R0020
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:179685..179687,aa:Met,seq:cat)
SIO_010081: CPHY_RS00790
subclass of: SO_0000673
so part of: CPHY_RS00790
location: 179651..179724
location: region:179651-179724:1
so has part: feature:179651-179724:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:179651-179724:1:exon

CPHY_RS00795
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00795
old locus tag: Cphy_0138
so part of: sequence
location: 180381..181964
location: region:180381-181964:1
so has part: feature:180381-181964:1:exon
subclass of: SO_0000010

position:180381:1
position: 180381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181964:1
position: 181964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180381-181964:1:exon

CPHY_RS00795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00795
old locus tag: Cphy_0138
inference: COORDINATES: protein motif:HMM:NF039380.1
GO function: GO:0016791 - phosphatase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SpoIIE family protein phosphatase
translation: MKKRRSWLLPLAGVVVALVTFFNASPNVVARYLIIATIVIILIGIAAVIVGLLQGSGSVDNGESYVKDEFQNTARKKLEGISGSIHKLASSFDYMASPKTVLNTEDMQLVLEDISTNLCKNCKKCGVCWERNFNQSYQATWNLLETAKGKGNVTVDDMPDMLRLQCIQVPEFVEEANRNLSMARLKMVWHNRIVESREAVAGQLGEIARIVKDFSGNLCDTGEVIELKRRKINQKLRVHRIKVQRVLMFERENRGMELHLRARCKNGRCLTTKEAAILIGNALERRFVPREDSRNVIGREYDDYVFCEDANFKVLTGVSRASKKKGELNGDNFSFLYPDSQDVVMMLSDGMGSGSEAYEESEMVIELLEQFLEAGFREEPAIKLINSVLVLRTENCMSSTVDLCVVNLCAGTCEFVKIGAATTFIKRDHFVETISSNSMPAGILNRVDYDTKSKKLYDGDYVIMVSDGVIDCVEEEDKEGYFINFIKNIPFKSPQEIANAILSAALEKHGYVPADDMTVLVTGIWKK
SIO_010081: CPHY_RS00795
subclass of: SO_0000673
so part of: CPHY_RS00795
location: 180381..181964
location: region:180381-181964:1
so has part: feature:180381-181964:1:exon

WP_012198170.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:180381-181964:1:exon

CPHY_RS00800
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: tilS
locus tag: CPHY_RS00800
old locus tag: Cphy_0139
so part of: sequence
location: 182200..183678
location: region:182200-183678:1
so has part: feature:182200-183678:1:exon
subclass of: SO_0000010

position:182200:1
position: 182200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183678:1
position: 183678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182200-183678:1:exon

CPHY_RS00800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: tilS
locus tag: CPHY_RS00800
old locus tag: Cphy_0139
EC number: 6.3.4.19
inference: COORDINATES: protein motif:HMM:TIGR02432.1
GO function: GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA lysidine(34) synthetase TilS
translation: MLKKVENFIKDQGMLSPFDTVIVGVSGGADSICLLTCLHRLREQYHLNLYAVHVNHMLRGMEADEDEAFVQSMCNSLSIPLHCVREDVKRIAELSGTTIEEAGRNLRYLSFEQECERVKAHKIAVAHNRNDNAETVLFHLFRGTGLTGMTGIPKKRGQIIRPLLCVTREEIETFLFNEHIFYRIDSTNLSNDYTRNKIRLSILPIATNEINERAVEHITSLSDQLLEVANYLDQVTEREFKRIATLSQESVTLDLREFTAIEDLIKREILRKAIKLISGLKDIESIHLVDGVNLCKCQVGKEIHLPNHIIVKRGYNTIIVFDSLKHSDKNDMIRNNQLDEIPLTIKKEDSVTNLCCHPNSQDCDGMEIFMKNGTVQLVDFLGKRLEIRVFPYENSLTIPKNSYTKWYDYDKIRNAVVIRTRREGDFLMIHPQGKTKSLKSLLVDQKIPREERDKIPLVTCDSHVLWAVGVRSSEAYRIDKDTNWVLSITTDR
SIO_010081: CPHY_RS00800
subclass of: SO_0000673
so part of: CPHY_RS00800
location: 182200..183678
location: region:182200-183678:1
so has part: feature:182200-183678:1:exon

WP_012198171.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:182200-183678:1:exon

CPHY_RS00805
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: hpt
locus tag: CPHY_RS00805
old locus tag: Cphy_0140
so part of: sequence
location: 183710..184234
location: region:183710-184234:1
so has part: feature:183710-184234:1:exon
subclass of: SO_0000010

position:183710:1
position: 183710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184234:1
position: 184234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183710-184234:1:exon

CPHY_RS00805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: hpt
locus tag: CPHY_RS00805
old locus tag: Cphy_0140
EC number: 2.4.2.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015529986.1
GO process: GO:0006166 - purine ribonucleoside salvage [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypoxanthine phosphoribosyltransferase
translation: MAENIKVLISEEEISKKIKELGEEISKEYAGKTLHLICVLKGGVFFMTELSKHITIPVTIDFMSVSSYGDSTVSSGRVRILKDLDESIDGRDVLVVEDIIDSGRTLAYLLDLLKNRQPNSLKLCTLLDKPSRREVDVNVDYTGFQIPDDFVVGYGLDYAQIYRNLPYIGVVQSE
SIO_010081: CPHY_RS00805
subclass of: SO_0000673
so part of: CPHY_RS00805
location: 183710..184234
location: region:183710-184234:1
so has part: feature:183710-184234:1:exon

WP_012198172.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:183710-184234:1:exon

CPHY_RS00810
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: ftsH
locus tag: CPHY_RS00810
old locus tag: Cphy_0141
so part of: sequence
location: 184265..186082
location: region:184265-186082:1
so has part: feature:184265-186082:1:exon
subclass of: SO_0000010

position:184265:1
position: 184265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186082:1
position: 186082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184265-186082:1:exon

CPHY_RS00810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: ftsH
locus tag: CPHY_RS00810
old locus tag: Cphy_0141
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006856320.1
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO process: GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent zinc metalloprotease FtsH
translation: MRGYGFYVIILLIIVSAVYLSESFASNSSVKHSYADYIADLQSGSVASVDIFQNQEAPTGRVKVNLSDGKNYTIYITSAATAEADAAANGVASYVHDIEKPSWFLTSVLPYLIGFVIIILMFSFLTSQVNGGGGGNNKVMNFGKSRAKMTMDEGKNTTFKNVAGLAEEKEELKEIVDFLKNPKKFIQVGARIPKGVLLEGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFSEAKKNNPCIIFIDEIDAVARRRGTGMGGGHDEREQTLNQLLVEMDGFGANEGIIVMAATNRVDILDPAILRPGRFDRKVLVGRPDVKGREEILAVHAKNKPLGDDVDLKQVAQTTAGFTGADLENLLNEAAISAAKDDRSFILGEDIKKSFIKVGIGTEKKSRVISDKEKKITAYHEAGHAILFHVLPDVGPVYTVSIIPTGGAAGYTMPLPEKDEMFNTRGKMRQDIIVSLGGRIAEELIFDDITTGASQDIKVATKTARSMVTRYGFTDSIGMVNYENDDEEVFIGRDLAHTKNMSEAVASKIDEEVKKIIDDCYKEAKRILTENMHVLHSCADRLIEKERITREEFESLFEVPEVV
SIO_010081: CPHY_RS00810
subclass of: SO_0000673
so part of: CPHY_RS00810
location: 184265..186082
location: region:184265-186082:1
so has part: feature:184265-186082:1:exon

WP_041703822.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:184265-186082:1:exon

CPHY_RS00815
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00815
old locus tag: Cphy_0142
so part of: sequence
location: 186300..186788
location: region:186300-186788:1
so has part: feature:186300-186788:1:exon
subclass of: SO_0000010

position:186300:1
position: 186300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186788:1
position: 186788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186300-186788:1:exon

CPHY_RS00815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00815
old locus tag: Cphy_0142
EC number: 2.3.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008977412.1
GO function: GO:0008080 - N-acetyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MENNIKIQLRPYQTSDCKEMSELFYQTVHNVTVKDYSLEQRMAWANGNVNLMVWDESFQSHYTLVATDGTLVLGFSDIDATGYLDRLYVHKDYQGIGIATMLCDALEAYYFSNGSEKITTHASITAKPFFHKRGYQIVKEQQVIRGGISLTNYVMALEKENF
SIO_010081: CPHY_RS00815
subclass of: SO_0000673
so part of: CPHY_RS00815
location: 186300..186788
location: region:186300-186788:1
so has part: feature:186300-186788:1:exon

WP_012198174.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:186300-186788:1:exon

CPHY_RS00820
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00820
old locus tag: Cphy_R0021
so part of: sequence
location: 187268..187349
location: region:187268-187349:1
so has part: feature:187268-187349:1:exon
subclass of: SO_0000663

position:187268:1
position: 187268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187349:1
position: 187349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187268-187349:1:exon

CPHY_RS00820
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 357809
locus tag: CPHY_RS00820
old locus tag: Cphy_R0021
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:187302..187304,aa:Tyr,seq:gta)
SIO_010081: CPHY_RS00820
subclass of: SO_0000673
so part of: CPHY_RS00820
location: 187268..187349
location: region:187268-187349:1
so has part: feature:187268-187349:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:187268-187349:1:exon

CPHY_RS00825
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00825
old locus tag: Cphy_R0022
so part of: sequence
location: 187354..187439
location: region:187354-187439:1
so has part: feature:187354-187439:1:exon
subclass of: SO_0000663

position:187354:1
position: 187354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187439:1
position: 187439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187354-187439:1:exon

CPHY_RS00825
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 357809
locus tag: CPHY_RS00825
old locus tag: Cphy_R0022
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:187388..187390,aa:Leu,seq:taa)
SIO_010081: CPHY_RS00825
subclass of: SO_0000673
so part of: CPHY_RS00825
location: 187354..187439
location: region:187354-187439:1
so has part: feature:187354-187439:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:187354-187439:1:exon

CPHY_RS00830
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00830
old locus tag: Cphy_R0023
so part of: sequence
location: 187556..187626
location: region:187556-187626:1
so has part: feature:187556-187626:1:exon
subclass of: SO_0000663

position:187556:1
position: 187556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187626:1
position: 187626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187556-187626:1:exon

CPHY_RS00830
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 357809
locus tag: CPHY_RS00830
old locus tag: Cphy_R0023
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:187588..187590,aa:Gly,seq:tcc)
SIO_010081: CPHY_RS00830
subclass of: SO_0000673
so part of: CPHY_RS00830
location: 187556..187626
location: region:187556-187626:1
so has part: feature:187556-187626:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:187556-187626:1:exon

CPHY_RS00835
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00835
old locus tag: Cphy_0143
so part of: sequence
location: 187663..189414
location: region:187663-189414:1
so has part: feature:187663-189414:1:exon
subclass of: SO_0000010

position:187663:1
position: 187663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189414:1
position: 189414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187663-189414:1:exon

CPHY_RS00835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00835
old locus tag: Cphy_0143
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009461791.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: B12-binding domain-containing radical SAM protein
translation: MKILLTAINAKYIHSNPAIYYLKSYAKEYRDHIELAEYTINQYTDDILQSIYKKRPTMLAFSCYIWNISMVEEVIREYRKLDASVKIWVGGPEVSYDPEECLKRLPEIDGVMIGEGEATFTELASYYSSTQSNIIEDARKTLSDISGIAYRKEDGEIIKTRDRKPMDFSRLPFLYKEAMELSEFANRIIYYETSRGCPFSCSYCLSSIDKRVRFRDLDLVYQELGLFLDKKVAQVKFIDRTFNCKKSHAMGIWQFIKEHDNGVTNFHFEIAADILDEEQLSLLETLRPGLIQLEIGVQSTNDTTIDAINRRMDLKMVSENVARIKKADNIHQHLDLIAGLPFEDYTSFGNSFNDVYAMKPDQLQLGFLKVLKGSYMEEVSKEYGIIYKAKPPYEVLYTKWLPYDDVIRLKGVEEMAEVYYNSGQFKETLAFLEHFIESPFHFYEDLAKFYETSGLFGLNHNRIRRYEILLEFLIERFDSNIVSVAKQMMIFDLYKRERLKTRPSFAPYPEEYKKIFKAYMTSQGTNKKGEQIHLEHFDYDIIEAASTGNIVKKDLFIKFDYQKKTILHGEAEFTILTQKEIEI
SIO_010081: CPHY_RS00835
subclass of: SO_0000673
so part of: CPHY_RS00835
location: 187663..189414
location: region:187663-189414:1
so has part: feature:187663-189414:1:exon

WP_012198175.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:187663-189414:1:exon

CPHY_RS00840
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: nth
locus tag: CPHY_RS00840
old locus tag: Cphy_0144
so part of: sequence
location: 189479..190168
location: region:189479-190168:1
so has part: feature:189479-190168:1:exon
subclass of: SO_0000010

position:189479:1
position: 189479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190168:1
position: 190168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189479-190168:1:exon

CPHY_RS00840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: nth
locus tag: CPHY_RS00840
old locus tag: Cphy_0144
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008726180.1
GO function: GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: endonuclease III
translation: MAREDEIKKKRLSKAEKERIDAILALLDEHYSTEYKCYLNHETPWQLLIATILSAQCTDERVNIVTKDLFVKYKSVEDFANADLSELEKDIHSTGFYRNKAKNIIACCQTLLREYHGEVPNDIDALTNLAGVGRKTANVIRGNIFHEPSIVVDTHVKRISKKLGFTKEDDPVKVEYDLMKILPREHWILYNIQIITHGRGLCTARSPQCDRCFLSHLCKENMKNIRVRK
SIO_010081: CPHY_RS00840
subclass of: SO_0000673
so part of: CPHY_RS00840
location: 189479..190168
location: region:189479-190168:1
so has part: feature:189479-190168:1:exon

WP_012198176.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:189479-190168:1:exon

CPHY_RS00845
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00845
old locus tag: Cphy_0145
so part of: sequence
location: 190232..190939
location: region:190232-190939:1
so has part: feature:190232-190939:1:exon
subclass of: SO_0000010

position:190232:1
position: 190232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190939:1
position: 190939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190232-190939:1:exon

CPHY_RS00845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00845
old locus tag: Cphy_0145
inference: COORDINATES: protein motif:HMM:TIGR00573.1
GO function: GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3'-5' exonuclease
translation: MNFLAIDIESTGLSPEKDRIIEIAAIRYIDGKPKERFEKLINPGCPLPERITELTGITEDMLAGAMTEREVIKEFLTFAGEDVLLGHNVSVDFSFIKTAADRLKIGYERQGIDTLYLSRTLKSDLEKKNLESMCEHYGIIRECSHRALEDAIAAATLYQKLYEEFNNNFEALFLPVELKYKVKKQEPMTEKQKKYLLDLVNYHKIEVPSGFTDFSKSKASRFIDKTILHYGRMKK
SIO_010081: CPHY_RS00845
subclass of: SO_0000673
so part of: CPHY_RS00845
location: 190232..190939
location: region:190232-190939:1
so has part: feature:190232-190939:1:exon

WP_012198177.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:190232-190939:1:exon

CPHY_RS00850
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00850
old locus tag: Cphy_0146
so part of: sequence
location: complement(190986..191600)
location: region:190986-191600:-1
so has part: feature:190986-191600:-1:exon
subclass of: SO_0000010

position:190986:-1
position: 190986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191600:-1
position: 191600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190986-191600:-1:exon

CPHY_RS00850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00850
old locus tag: Cphy_0146
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPIILGIIIILGAWIAFQKRKSERGSKKDSKAFWEKENQSNLVRKKDLSTLPYITIPYDSLSLKETSDAELAHIQKQLYELREQKIVNLSHITNTELKLEYGTANLNLLSSYDQNFTILIRLLNKWATLLYESGEKQQAVDVLEFALSIGSDISNSYTLLAKLYLEFDRKEEISSLITRAKDVQTILKDSILDQLYEMYGKEDV
SIO_010081: CPHY_RS00850
subclass of: SO_0000673
so part of: CPHY_RS00850
location: complement(190986..191600)
location: region:190986-191600:-1
so has part: feature:190986-191600:-1:exon

WP_012198178.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:190986-191600:-1:exon

CPHY_RS00855
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00855
old locus tag: Cphy_0147
so part of: sequence
location: 191877..192836
location: region:191877-192836:1
so has part: feature:191877-192836:1:exon
subclass of: SO_0000010

position:191877:1
position: 191877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192836:1
position: 192836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191877-192836:1:exon

CPHY_RS00855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00855
old locus tag: Cphy_0147
inference: COORDINATES: protein motif:HMM:NF016202.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VanW family protein
translation: MKMKQNVLMTVLLCLMVIICVGCNNEAPPKEQDHSLDGALLDVTPSISPESVTATPNADFISEEGKETITENTTPLKPGNVEIDANAILGQFTTHFYNSSKARKNNIVNAAKKIHLKVVNPGEVFSTVGAISPITKDNGYDDAGTYQDGRVVNAIGGGVCQVSTTLYNAVLGAELKVTERHPHSMTVSYVELGRDAAIAGDYMDFCFQNTLETPIVIEAIADPAGSITVRIRGVETRDKSKRKVSYESVILETIEPGPAVITYDKNQPKNYLKVTQSAHSGYKVELYRLIYYQGELIDRILLNTSTYEAAPQYLTIGIK
SIO_010081: CPHY_RS00855
subclass of: SO_0000673
so part of: CPHY_RS00855
location: 191877..192836
location: region:191877-192836:1
so has part: feature:191877-192836:1:exon

WP_012198179.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:191877-192836:1:exon

CPHY_RS00860
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00860
old locus tag: Cphy_0148
so part of: sequence
location: 193050..194048
location: region:193050-194048:1
so has part: feature:193050-194048:1:exon
subclass of: SO_0000010

position:193050:1
position: 193050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194048:1
position: 194048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193050-194048:1:exon

CPHY_RS00860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00860
old locus tag: Cphy_0148
inference: COORDINATES: protein motif:HMM:NF014788.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AIR synthase family protein
translation: MKTGKVSEVILKRSVLKFLGTKQRNTPVISLDAGKIEFDESTDLLFATASMQGNQFGLIESVFHRAVNNIYAKGGKPIAVSTSLTLRSHADEQELKLYSKELNRLSTLYSIPVLSGETMVGAGATQNTITIHATGKVNKQSNTMDKKQESIEDSAKEYQIVMSKYIGLSATKLLIESRKEKLKERLTESFLAGGKKIGELLSIQKEMEVSTDFDILCSHDVSEGGIFAALWEVGESLQCGMEVSLDSILLIQETIEVCETLDLNPYLLYSGGCVLFVTKQGEALVEKLNNEGIPASVIGKTTNSPDRIVRKEDEIRYLEPFKGDEIYKGLSE
SIO_010081: CPHY_RS00860
subclass of: SO_0000673
so part of: CPHY_RS00860
location: 193050..194048
location: region:193050-194048:1
so has part: feature:193050-194048:1:exon

WP_012198180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:193050-194048:1:exon

CPHY_RS00865
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00865
old locus tag: Cphy_0149
so part of: sequence
location: 194082..194564
location: region:194082-194564:1
so has part: feature:194082-194564:1:exon
subclass of: SO_0000010

position:194082:1
position: 194082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194564:1
position: 194564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194082-194564:1:exon

CPHY_RS00865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00865
old locus tag: Cphy_0149
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013271088.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Lrp/AsnC family transcriptional regulator
translation: MREKILKAIDKNSKLTAKELAVMLGAEEAAVAATIKELEAESIICGYPTLINWDKTESEKVTALIEVKVTPQRGQGFDRIAERIYKFEEVESVYLMSGGFDLTVIIDGKSMREVANFVSSKLAPMEAVLSTATHFVLKKYKEHGMPLVHEVEDERMLITP
SIO_010081: CPHY_RS00865
subclass of: SO_0000673
so part of: CPHY_RS00865
location: 194082..194564
location: region:194082-194564:1
so has part: feature:194082-194564:1:exon

WP_012198181.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:194082-194564:1:exon

CPHY_RS00870
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00870
old locus tag: Cphy_0150
so part of: sequence
location: 194561..195721
location: region:194561-195721:1
so has part: feature:194561-195721:1:exon
subclass of: SO_0000010

position:194561:1
position: 194561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195721:1
position: 195721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194561-195721:1:exon

CPHY_RS00870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00870
old locus tag: Cphy_0150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012740079.1
GO function: GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO process: GO:0009058 - biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
translation: MRNPLNNKVVNIQPSGIRKFFDIVSEMKDAISLGVGEPDFDTPWHIREEGIYSLEKGKTFYTSNSGLVELRKEICNYLYRRCNLTYDYRHDVLVTVGGSEAIDAALRAMIDEGDEVLIPQPSYVSYLPCVLLADGKPVIIELKHENNFKLTKQELLDSITDKTKILVLPFPNNPTGAIMTEEELKEIAEVIIEKDLFVLSDEIYSELTYGTKHVSIASLPGMKERTIVINGFSKSYAMTGWRLGYAAGPKEIIEQMTKIHQFAIMCAPTTSQYAAVEALRAGDPDVEMMRDDYDKRRRYVVNALQEMGLECFEPFGAFYVFPCIKSLGMTSDEFANALLQEEKVAVVPGTAFGDCGEGFLRISYAYSIENLKEALGRMARFVKKHR
SIO_010081: CPHY_RS00870
subclass of: SO_0000673
so part of: CPHY_RS00870
location: 194561..195721
location: region:194561-195721:1
so has part: feature:194561-195721:1:exon

WP_012198182.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:194561-195721:1:exon

CPHY_RS00875
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00875
old locus tag: Cphy_0151
so part of: sequence
location: 195976..196446
location: region:195976-196446:1
so has part: feature:195976-196446:1:exon
subclass of: SO_0000010

position:195976:1
position: 195976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196446:1
position: 196446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195976-196446:1:exon

CPHY_RS00875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00875
old locus tag: Cphy_0151
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005601826.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chemotaxis protein CheX
translation: MAVISADYINPFLIAATKVLKDMVMIDTKVGKPYTKEAVIADQALLIMLGVTGEMSGQVILSFEDKVALDIASKMCMMTLNELDELSKSAICELCNMILGNTATVFSTKGIEVDITPPTMCTGTVKFTNNFAANICIPLIYEDGKTIEINVAIKEK
SIO_010081: CPHY_RS00875
subclass of: SO_0000673
so part of: CPHY_RS00875
location: 195976..196446
location: region:195976-196446:1
so has part: feature:195976-196446:1:exon

WP_012198183.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:195976-196446:1:exon

CPHY_RS00880
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00880
old locus tag: Cphy_0152
so part of: sequence
location: 196592..197101
location: region:196592-197101:1
so has part: feature:196592-197101:1:exon
subclass of: SO_0000010

position:196592:1
position: 196592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197101:1
position: 197101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196592-197101:1:exon

CPHY_RS00880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00880
old locus tag: Cphy_0152
EC number: 2.1.1.207
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012743757.1
GO function: GO:0003723 - RNA binding [Evidence IEA]; GO:0008175 - tRNA methyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (cytidine(34)-2'-O)-methyltransferase
translation: MIIMNIILFEPEIPANTGNIGRTCVATGTKLHLIEPLGFRLDEKEIKRAGLDYWKDLDVTVYENYDDFLRRNPNAKIYMATTKARHVYTEVSYEPDCFIMFGKESAGIPEEILLENKETSIRIPMIGDIRSLNLSNSVAIVLYEALRQQNFDHMRLLGNLHHHSWEEAK
SIO_010081: CPHY_RS00880
subclass of: SO_0000673
so part of: CPHY_RS00880
location: 196592..197101
location: region:196592-197101:1
so has part: feature:196592-197101:1:exon

WP_085953454.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:196592-197101:1:exon

CPHY_RS00885
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00885
old locus tag: Cphy_0153
so part of: sequence
location: 197521..199911
location: region:197521-199911:1
so has part: feature:197521-199911:1:exon
subclass of: SO_0000010

position:197521:1
position: 197521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199911:1
position: 199911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197521-199911:1:exon

CPHY_RS00885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00885
old locus tag: Cphy_0153
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198185.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: endonuclease MutS2
translation: MNEKALRTLEYHKIIEKLSALAGSSLGREKCHQLLPLVKLEDIVQMQQETTDALTRLYAKGTLSFSGIPDIRDTLMRLEIGASLGAGELLKISSVLTATLRAKNYGYNQKNNEETEEAAQDTLTERFHLLEPLSPINNEIRRCIISEEEIADDASPGLKSVRRQIKITNDKIHESLGSILNSASTKGMLQDAIITMRNGRYCLPIKQEYKNTFQGMMHDQSSTGSTAFIEPMAIVKLNNELAELAVREQEEIEKILAELSNLVATEKYNLKYNQTTLAELDFIFARAGLSKNMKASQPHFNNRHYINIKKGRHPLIDPKKVVPIDIYFGDKFDLLVITGPNTGGKTVSLKTVGLFTLMGQAGLHIPAFDGSELSIFEEVYADIGDEQSIEQSLSTFSSHMTNTVSILEHANENSLVLFDELGAGTDPTEGAALAMAILSYLHQRKIRTMATTHYSELKIFALSTDGVSNACCEFSVETLQPTYRLLIGIPGKSNAFAISSKLGLSNYIIEKAREFIGTKDESFEDVISNLEASRIAMEKDKAEAEQYKKEVEELKRKLAEKNSKIDDAKDRILREANEKARTILQEAKDYADETIRKYNKWGAGGANNKEMENERAALREKLGDTDSSLVSKAKKNRKQHKPSDFKVGDSVHVISLNLKGSVSTLPNAKGDLYVQMGILRSLVNISDLELIDEETIVAKALTKTQSGKIRMSKSMSISPELNIIGKRVDEALPLVDKYLDDAYLAHLPQVTIIHGRGTGALKEAVHAHLKRTNYVKGYRVGGFGEGDHGVTIVEFK
SIO_010081: CPHY_RS00885
subclass of: SO_0000673
so part of: CPHY_RS00885
location: 197521..199911
location: region:197521-199911:1
so has part: feature:197521-199911:1:exon

WP_012198185.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:197521-199911:1:exon

CPHY_RS00890
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00890
old locus tag: Cphy_0154
so part of: sequence
location: 199945..200661
location: region:199945-200661:1
so has part: feature:199945-200661:1:exon
subclass of: SO_0000010

position:199945:1
position: 199945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200661:1
position: 200661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199945-200661:1:exon

CPHY_RS00890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00890
old locus tag: Cphy_0154
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013271092.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator transcription factor
translation: MATKQKILIVDDDANIAELISLYLMKECFDTKIVYDGEEAITQYREYQPNLILLDLMLPGIDGYEVCREVRKTSTIPIIMLSAKGEIFDKVLGLELGADDYMIKPFDTKELVARVKAVLRRVVPSQSTSEQVITQELGDFVSYPDLIINQSNYSVTYFGDSIEMPPKELELFYFLASHPNQVFTREQLLDHIWGYEYIGDTRTVDVHIKRLREKIKDHISWRLSTVWGIGYKFEVKKN
SIO_010081: CPHY_RS00890
subclass of: SO_0000673
so part of: CPHY_RS00890
location: 199945..200661
location: region:199945-200661:1
so has part: feature:199945-200661:1:exon

WP_012198186.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:199945-200661:1:exon

CPHY_RS00895
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00895
old locus tag: Cphy_0155
so part of: sequence
location: 200702..202090
location: region:200702-202090:1
so has part: feature:200702-202090:1:exon
subclass of: SO_0000010

position:200702:1
position: 200702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202090:1
position: 202090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200702-202090:1:exon

CPHY_RS00895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00895
old locus tag: Cphy_0155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012743673.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAMP domain-containing sensor histidine kinase
translation: MKRTAFVKLILCYCFAAISMFLLLNTFGVKFMEQKLMDRKKDELYKEATIIVSDYATKLSHSDMEEQMRVIDKFLGTRIWIVSEAGIVVADTRSNANRMNITNMDVNFLEQTFSENVYFKGIFSEPMLSVVVRIPYNYSIKGYVCIHIPMDSIRSESIYYTDLVSVCYLVFLIILFLIFMIIYYITVFPVRRITKVCSEYAKGNFDERMEIRTNDEYRELANSVKYMADELKNLDDYQKKFVANISHDFRSPLTSIGGYAEAMRDGTIPYEMQNKYLDIILFETERLTKLTTNLLALNSFENKGTLLDISSFDINAVIRKTAATFEGQCTKKRIVFKLEFSAKETFVDADIDKIQQVLYNLIDNAIKFSNVDSTIKVTTEEKGSKVLISVKDHGIGIPKDSIKKIWERFYKTDSSRGKDKKGTGLGLSITKEIITSHNENINVVSTEGVGTEFIFSLKKTDY
SIO_010081: CPHY_RS00895
subclass of: SO_0000673
so part of: CPHY_RS00895
location: 200702..202090
location: region:200702-202090:1
so has part: feature:200702-202090:1:exon

WP_012198187.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:200702-202090:1:exon

CPHY_RS00900
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00900
old locus tag: Cphy_0156
so part of: sequence
location: 202257..203633
location: region:202257-203633:1
so has part: feature:202257-203633:1:exon
subclass of: SO_0000010

position:202257:1
position: 202257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203633:1
position: 203633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202257-203633:1:exon

CPHY_RS00900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00900
old locus tag: Cphy_0156
inference: COORDINATES: protein motif:HMM:NF024758.2
GO function: GO:0005515 - protein binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PDZ domain-containing protein
translation: METKTPEPEKEFRFIQEKVVPRRKHRVKKMAYATAFAVALAIIFGLVARYVFIKSDHFWIKVLGIDTTKREPITFPSEGQEDPNGVDGTGENVTITPSISTTPEPTVSVTGAPSEGNGDQETVVEKKIEATIEDYERMLFELRKVGTTAMSGLAMVTAIENRVDWFDETYETKRTTTGIVIGENSAEILILTSLDKINGASDLEVTFNSGFTASGLTVPGKLWSFDKDYNLAVIAVKLKDIPPQQVSSIKTAKLGESHSVTLGTPVIALGKPDGYFGSMMFGMISSRGDYYYIMDNRLDVFHTDLNVNSNSDGVIINTNGEIIGIMTQAMKDPANPNVSTVIGISRLTSIMDKLANKTERVTFGIIGEDIPSDVLQSFNLSGGIYVTEVRSDSPAFNAGIKQGDIITQVNEFSISSVTNFNTILNNYKPKETVTVVVQRKVKQELSESSVKVVLELKE
SIO_010081: CPHY_RS00900
subclass of: SO_0000673
so part of: CPHY_RS00900
location: 202257..203633
location: region:202257-203633:1
so has part: feature:202257-203633:1:exon

WP_012198188.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:202257-203633:1:exon

CPHY_RS00905
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00905
old locus tag: Cphy_0157
so part of: sequence
location: complement(203748..204632)
location: region:203748-204632:-1
so has part: feature:203748-204632:-1:exon
subclass of: SO_0000010

position:203748:-1
position: 203748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204632:-1
position: 204632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203748-204632:-1:exon

CPHY_RS00905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00905
old locus tag: Cphy_0157
EC number: 2.3.1.-
inference: COORDINATES: protein motif:HMM:NF024917.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MEYKVNFQNDTTLRNSFHALTQKVFHFQLGDWYENGYWSESYEPHSMIDGNTVVANISVNHMTTTLDGVKKHFLQLGTVMTDPAYRNQGLSRQLMVSILEKYLGKVDGIYLFANDSVLEFYPKFGFTKSNEYVYRYHVNSSELKNNLDCKDFEPQKVDITDPNQREFLIEAAKQSVPNEAFSMDNFGLMAFCLTGPYSNNIYYLPKLDAYIVATIHEKILFLQQIIASKIIEPKDIALFYSDKIETIELGFTPFHTSLYEVSTYHEEDSTLFILGEELLAIERLKLHFQDLSHA
SIO_010081: CPHY_RS00905
subclass of: SO_0000673
so part of: CPHY_RS00905
location: complement(203748..204632)
location: region:203748-204632:-1
so has part: feature:203748-204632:-1:exon

WP_012198189.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:203748-204632:-1:exon

CPHY_RS00910
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00910
old locus tag: Cphy_0158
so part of: sequence
location: 204918..205865
location: region:204918-205865:1
so has part: feature:204918-205865:1:exon
subclass of: SO_0000010

position:204918:1
position: 204918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205865:1
position: 205865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204918-205865:1:exon

CPHY_RS00910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00910
old locus tag: Cphy_0158
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008399144.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HD domain-containing protein
translation: MRYLGELRDGEMFKETYLCKQLQILKTKAGKSYYSMLIQDKTGIKDAKVWELGPGIEHFDTMDYIHIEGQVTCFQGSLQLNVKRVRKCQEGEYDPADYMPSTDKNVEDMYKELLRYVDKIKEPHVKKLAQSFFVEDKDFALRFKRHSAAKSVHHGFMGGLLEHTLGVVRLCDYLADQYPLIQRDLLLVSAMFHDLGKLDEISSFPENDYTDEGNLLGHIFIGTAKLNERMKTIPGFPKKMASEIMHCILAHHGELEYGSPKKPALMEALALSMADNLDAKLQTMKEILTGEEDKNDWLGFQRLFESNVRRTSDYE
SIO_010081: CPHY_RS00910
subclass of: SO_0000673
so part of: CPHY_RS00910
location: 204918..205865
location: region:204918-205865:1
so has part: feature:204918-205865:1:exon

WP_012198190.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:204918-205865:1:exon

CPHY_RS00915
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: rlmD
locus tag: CPHY_RS00915
old locus tag: Cphy_0159
so part of: sequence
location: 206112..207518
location: region:206112-207518:1
so has part: feature:206112-207518:1:exon
subclass of: SO_0000010

position:206112:1
position: 206112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207518:1
position: 207518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206112-207518:1:exon

CPHY_RS00915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: rlmD
locus tag: CPHY_RS00915
old locus tag: Cphy_0159
EC number: 2.1.1.190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015513534.1
GO function: GO:0008649 - rRNA methyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
translation: MEQVKIPGKNEVVPITIEDIGADGEGIGKVHGFTLFVKDAVVGDELLVKVMKTKKTYGYARIEQIVTPSPYRVNPRCEIASKCGGCQIQQLSYEEQLRYKQNKVLNCLKRIGGIENPPMEPIVGMENPYYYRNKAQFPVGKRTDGEVVIGFYAGRTHSIIDTAKCHIGDESTEPLIACIRNFLKQENISIYDEESHQGLVRHILLRVGFTTKELMICVVINGKELPASDKLIKQILACPNLPKDFRVTSICLNKNTKKTNVILGEEIIPLYGPTYITDYIGDIKYQISPLSFYQVNPVQTKKLYELALDYTDLTGNELVWDLYCGIGTISLFLAQKAKMVYGVEIIPQAIEDAKSNAKLNDINNAEFFVGAAEEVLPKQYQLSGGKIYADVIVVDPPRKGCDESLLETIVAMEPKRIVYVSCDPATLARDLKYLIEHGYDLKKVRPVDQFPHSVHVESVTLLTRRNEL
SIO_010081: CPHY_RS00915
subclass of: SO_0000673
so part of: CPHY_RS00915
location: 206112..207518
location: region:206112-207518:1
so has part: feature:206112-207518:1:exon

WP_012198191.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:206112-207518:1:exon

CPHY_RS00920
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00920
old locus tag: Cphy_0160
so part of: sequence
location: 207721..208305
location: region:207721-208305:1
so has part: feature:207721-208305:1:exon
subclass of: SO_0000010

position:207721:1
position: 207721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208305:1
position: 208305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207721-208305:1:exon

CPHY_RS00920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00920
old locus tag: Cphy_0160
inference: COORDINATES: protein motif:HMM:NF014069.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HD domain-containing protein
translation: MTYSVDRENLNNILVSSKDIKEYKDEILRIVPELIICVDCEQNMPAHIYNVFDHILETVNKVDSNLILKIAALLHDIGKPYRKTVIDNVDSFKGHEEASEIIANLILTRLGYEEVFKNKICRLIKYHDYYITPTVEGVKEAVDLIGDELMPYLFCFQKADLLAHSEQRYKPRLPKLNEANVIYESCIRESCGIK
SIO_010081: CPHY_RS00920
subclass of: SO_0000673
so part of: CPHY_RS00920
location: 207721..208305
location: region:207721-208305:1
so has part: feature:207721-208305:1:exon

WP_012198192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:207721-208305:1:exon

CPHY_RS21890
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS21890
old locus tag: Cphy_0161
so part of: sequence
location: 208327..208629
location: region:208327-208629:1
so has part: feature:208327-208629:1:exon
subclass of: SO_0000010

position:208327:1
position: 208327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208629:1
position: 208629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208327-208629:1:exon

CPHY_RS21890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS21890
old locus tag: Cphy_0161
inference: COORDINATES: protein motif:HMM:NF021778.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: beta-propeller fold lactonase family protein
translation: MRVESGHFGDILHQEIQQEGAAALTRVHCVLLNRKEDRLVAVNIALDHIFIYAVNQGYLTLERIIKAPEGSGPRHALFSENESYLYVITEYSNEIKEKAY
SIO_010081: CPHY_RS21890
subclass of: SO_0000673
so part of: CPHY_RS21890
location: 208327..208629
location: region:208327-208629:1
so has part: feature:208327-208629:1:exon

WP_012198193.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:208327-208629:1:exon

CPHY_RS21895
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS21895
old locus tag: Cphy_0162
so part of: sequence
location: 208651..209175
location: region:208651-209175:1
so has part: feature:208651-209175:1:exon
subclass of: SO_0000010

position:208651:1
position: 208651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209175:1
position: 209175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208651-209175:1:exon

CPHY_RS21895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS21895
old locus tag: Cphy_0162
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEGNFKGRKKNALNLKTPSAWIIVAATVFVLIFSIVFATNRANEGIGDHDFYNFNVNGFTLGADIDKMDTSALTPTEPLNINNGYDYNFEEVRYSADENTGRLKKMFVNVYDGAYIPVVTIHTGEAASYIPNNLTTIEQITTIFGQGKKGWQDREQGLRYMEYRQKEGRLSATE
SIO_010081: CPHY_RS21895
subclass of: SO_0000673
so part of: CPHY_RS21895
location: 208651..209175
location: region:208651-209175:1
so has part: feature:208651-209175:1:exon

WP_012198194.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:208651-209175:1:exon

CPHY_RS00935
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00935
old locus tag: Cphy_0163
so part of: sequence
location: 209338..209613
location: region:209338-209613:1
so has part: feature:209338-209613:1:exon
subclass of: SO_0000010

position:209338:1
position: 209338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209613:1
position: 209613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209338-209613:1:exon

CPHY_RS00935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00935
old locus tag: Cphy_0163
EC number: 2.3.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019849984.1
GO function: GO:0008080 - N-acetyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MLEIKKGTKSFYIGDSEENPLAIMTYIFSGENLIIVDHTYVSDELKGQGIGKLLLKELVDWVRKENKKIIPQCSYVKAQLEKNKEYHDILN
SIO_010081: CPHY_RS00935
subclass of: SO_0000673
so part of: CPHY_RS00935
location: 209338..209613
location: region:209338-209613:1
so has part: feature:209338-209613:1:exon

WP_012198195.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:209338-209613:1:exon

CPHY_RS00940
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00940
old locus tag: Cphy_0164
so part of: sequence
location: 209694..210575
location: region:209694-210575:1
so has part: feature:209694-210575:1:exon
subclass of: SO_0000010

position:209694:1
position: 209694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210575:1
position: 210575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209694-210575:1:exon

CPHY_RS00940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00940
old locus tag: Cphy_0164
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009295992.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MBL fold metallo-hydrolase
translation: MYELIQVGEKTYYINCPAKIGIYRINESDVCLIDSGNDKEAGKKVQKILEAHHWKLSMIINTHSHADHIGGNSLLQQRLECPAYSAGIDKSFIQNPVLEPSFLYGGYPCKELRNKFLMAQASTISELTEEVLPEGLEMIRLDGHSFSMVGLKTSDDVWFLADCLTSSNIIKKYHVSFLYDVNKYLETLVKVENLQGKLFIPAHAEPTDNIKELVDINRNKIFEIIELIKKTCKEPKCFEDILKNIFDNFQLTMDFTQYVLVGSTVRSYLSYLHDKGELEVEFKDNKLLWLAGS
SIO_010081: CPHY_RS00940
subclass of: SO_0000673
so part of: CPHY_RS00940
location: 209694..210575
location: region:209694-210575:1
so has part: feature:209694-210575:1:exon

WP_012198196.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:209694-210575:1:exon

CPHY_RS22265
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS22265
so part of: sequence
location: 210575..210697
location: region:210575-210697:1
so has part: feature:210575-210697:1:exon
subclass of: SO_0000010

position:210697:1
position: 210697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210575-210697:1:exon

CPHY_RS22265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS22265
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSGGSVNTLALLTIVGTIPEGFRLKDGVYSDMHIMYLPFN
SIO_010081: CPHY_RS22265
subclass of: SO_0000673
so part of: CPHY_RS22265
location: 210575..210697
location: region:210575-210697:1
so has part: feature:210575-210697:1:exon

WP_278183983.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:210575-210697:1:exon

CPHY_RS00945
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00945
old locus tag: Cphy_0165
so part of: sequence
location: 210906..211790
location: region:210906-211790:1
so has part: feature:210906-211790:1:exon
subclass of: SO_0000010

position:210906:1
position: 210906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211790:1
position: 211790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210906-211790:1:exon

CPHY_RS00945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00945
old locus tag: Cphy_0165
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011459791.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AraC family transcriptional regulator
translation: MNYREDIETCVEYIEEHIKENITMEEVASQIGYSLYHFSRVFSLCKGISVMEYIRNRRLSLAATQLFQGRKIIDIAFDYEFETPSGFANSFRNAFGYSPTQFMKRMAGYAETKTTVEIGGYIMNPAIVKRPEFMVAGYGIKTNITGDAYTKDVASFWSNYDGENLESKMYKILNPKKHGEVGLCVPLSEDGNAIYLLGVIVEDFSKVEEDMLTVVVPEAVYAVFTTPPVDTTKDMEQKEFAKIIASTWKYIFEEWFKDSGYVYDESKLDFEYYDERCHHRQDTVMDIYVPVKVK
SIO_010081: CPHY_RS00945
subclass of: SO_0000673
so part of: CPHY_RS00945
location: 210906..211790
location: region:210906-211790:1
so has part: feature:210906-211790:1:exon

WP_041703044.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:210906-211790:1:exon

CPHY_RS21115
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS21115
old locus tag: Cphy_0166
pseudo: true
so part of: sequence
location: 211950..212563
location: region:211950-212563:1
so has part: feature:211950-212563:1:exon
subclass of: SO_0000010

position:211950:1
position: 211950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212563:1
position: 212563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211950-212563:1:exon

CPHY_RS21115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS21115
old locus tag: Cphy_0166
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005813917.1
GO function: GO:0043565 - sequence-specific DNA binding [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: AraC family transcriptional regulator
SIO_010081: CPHY_RS21115
subclass of: SO_0000673
so part of: CPHY_RS21115
location: 211950..212563
location: region:211950-212563:1
so has part: feature:211950-212563:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:211950-212563:1:exon

CPHY_RS00955
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00955
old locus tag: Cphy_0168
so part of: sequence
location: 212694..213392
location: region:212694-213392:1
so has part: feature:212694-213392:1:exon
subclass of: SO_0000010

position:212694:1
position: 212694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213392:1
position: 213392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212694-213392:1:exon

CPHY_RS00955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00955
old locus tag: Cphy_0168
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005609786.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transglutaminase-like domain-containing protein
translation: MEKHLKATLLLDYRDKSIQELIRMKNWDQSNEFDKILQTYNYVRDEIKFGYNVDDAIPASKVLADGYGQCNTKLILFMALLRALNIPCRVHGFSIDKELQKGALPTYLYKFAPKNIIHSWVEVYYMGKWYNLEGIIIDSQYLLKLQEKFPDCKGRFCGYGVSVDNFKNPVIDWSGNDTYIQKESINEDYGTFDNPDALFSNYPQKLSLLKRFLYRHFGRHIMNRRVDKIRNL
SIO_010081: CPHY_RS00955
subclass of: SO_0000673
so part of: CPHY_RS00955
location: 212694..213392
location: region:212694-213392:1
so has part: feature:212694-213392:1:exon

WP_012198198.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:212694-213392:1:exon

CPHY_RS21120
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS21120
old locus tag: Cphy_0169
so part of: sequence
location: complement(213494..213919)
location: region:213494-213919:-1
so has part: feature:213494-213919:-1:exon
subclass of: SO_0000010

position:213494:-1
position: 213494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213919:-1
position: 213919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213494-213919:-1:exon

CPHY_RS21120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS21120
old locus tag: Cphy_0169
inference: COORDINATES: protein motif:HMM:NF024252.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MNNELIAKRLKELRKSFEYTQEFVASYLNIGRQAYSHYETGRNAPTTDTLYKLASLYHIPVNDLLKLLSPHPQETYTTPESNNIASNMLSDFLDYLGNPDNEKKLKMLNRKEKELLFCFEKISTKDQDDILEFIKIKARKK
SIO_010081: CPHY_RS21120
subclass of: SO_0000673
so part of: CPHY_RS21120
location: complement(213494..213919)
location: region:213494-213919:-1
so has part: feature:213494-213919:-1:exon

WP_012198199.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:213494-213919:-1:exon

CPHY_RS00965
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00965
old locus tag: Cphy_0170
so part of: sequence
location: 214132..214602
location: region:214132-214602:1
so has part: feature:214132-214602:1:exon
subclass of: SO_0000010

position:214132:1
position: 214132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214602:1
position: 214602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214132-214602:1:exon

CPHY_RS00965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00965
old locus tag: Cphy_0170
inference: COORDINATES: protein motif:HMM:NF015935.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: JAB domain-containing protein
translation: MKINVYNTMLNEETRHNELKIEKSIICEDNNKLESPSEIQKLMKEQFQIHKKAEEYVYLVSLDMKCNPLGIFELSHGTVNSSLIMPREIFIRALLSGAVGIIIVHNHPSSDITPSKQDLLVTEKIAQAGNMIGVELLDHIIIGGNEYCSLKEMGVL
SIO_010081: CPHY_RS00965
subclass of: SO_0000673
so part of: CPHY_RS00965
location: 214132..214602
location: region:214132-214602:1
so has part: feature:214132-214602:1:exon

WP_012198200.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:214132-214602:1:exon

CPHY_RS00970
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00970
old locus tag: Cphy_0171
so part of: sequence
location: complement(214786..216945)
location: region:214786-216945:-1
so has part: feature:214786-216945:-1:exon
subclass of: SO_0000010

position:214786:-1
position: 214786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216945:-1
position: 216945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214786-216945:-1:exon

CPHY_RS00970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00970
old locus tag: Cphy_0171
EC number: 2.7.7.65
inference: COORDINATES: protein motif:HMM:TIGR00254.1
GO function: GO:0009975 - cyclase activity [Evidence IEA]
GO process: GO:0009966 - regulation of signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: diguanylate cyclase
translation: MKRQQLNIHQILDIFYKSTGIEAIFFDTELNLIMHRASEKLTTYYPFLGISEVMAYLADRFSEQPGTNSAFYTYVLPNNFLCNIAFLTQENSYIGAFLTEPVLLKKLNKSDLDKVLNRSELSNQDKKTFENILFKVPVIPYINILPIGTVLYQLSKTYSENMPQQIIIEHKARTSALNHNSNKKQNIVITSSVKYTPFSTYLQIIEIIKSGDVVRLRSAMNEISVGEILMNQSNDSDIMRSIKNSFIKTCSMGCYAAIDANASYEKVMDISDDYISKIETNDNINDIIALLKEVMISYTKAVAMNRNTIYSKPIRQVMEYIQCHYDEKITLEKLSEYTELSTFYLSNLIKKETDLSLPDIVNKVRIEKSKPLLLNMNISILDVAQRVGFNYQNHFASIFKKYTDLTPTEYRKTMSYKQNTNSSEFENSLINVVEQINNKISMFSHLFDAARIVDPIRHKSMFIKTSDTVFPEETCYHFWYRSESCQNCISMKSYLHNDTFFKIEHRDNDTFLMIATPKTVGKDTYIVEIMKDVTKQLSINIKAESPENPTLVIDKKFREEKDELTGLYNRRYISDQLPVSMRHSILERKSLFIVLFVIDELQSIDNYSDYESYDSILKEFTRLITSSLVNKKDWAGRYAGSLFLLVLYDTDYESACNTADNIKNNFNQTSFQINGTAVKLTANYGVKLLNEDISDVETLILHAFMNLITNKLRVQNIID
SIO_010081: CPHY_RS00970
subclass of: SO_0000673
so part of: CPHY_RS00970
location: complement(214786..216945)
location: region:214786-216945:-1
so has part: feature:214786-216945:-1:exon

WP_012198201.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:214786-216945:-1:exon

CPHY_RS00975
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00975
old locus tag: Cphy_0172
so part of: sequence
location: 217242..218183
location: region:217242-218183:1
so has part: feature:217242-218183:1:exon
subclass of: SO_0000010

position:217242:1
position: 217242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218183:1
position: 218183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217242-218183:1:exon

CPHY_RS00975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00975
old locus tag: Cphy_0172
inference: COORDINATES: protein motif:HMM:NF013540.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MNFIGSIIREYRCKLKMSRTMLAENICSEKYIYLIEKGERTPSADMVRLLSDRMGVDLFDHYQYLDCSNPISVRETLKNFDICQRKSDFITAKSIVDKAMYLADFKNKPWLYELEANRLGYMVFIENKYEEAIMDANKVLEDMEPKYLSSIHVVNLYVLLSTCYQIIGDLNNAKSITLAAYNIVRSKYKIEKYDHNIVSVRLNLITLYYLTKDYEKAITEGKELIDYQIEFNSYARIHIAYAFLSFSYFKKDAFKEAFLYFNQTISVLMAFYNPIDLKYIVAQDIFQLMVKDERVNHKLVKEFKMKYELSYDK
SIO_010081: CPHY_RS00975
subclass of: SO_0000673
so part of: CPHY_RS00975
location: 217242..218183
location: region:217242-218183:1
so has part: feature:217242-218183:1:exon

WP_012198202.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:217242-218183:1:exon

CPHY_RS00980
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00980
old locus tag: Cphy_0173
so part of: sequence
location: 218439..219458
location: region:218439-219458:1
so has part: feature:218439-219458:1:exon
subclass of: SO_0000010

position:218439:1
position: 218439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219458:1
position: 219458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218439-219458:1:exon

CPHY_RS00980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00980
old locus tag: Cphy_0173
EC number: 2.7.7.65
inference: COORDINATES: protein motif:HMM:TIGR00254.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GGDEF domain-containing protein
translation: MKQKHNGVRRIHQDNMRENNQSRTSILFAIALLIYIVLSIYQLQIRNQLVKQILLHFQVILTVSFVISEIKHSYLISILVTLFCFLLSFLSFFTDENEQAIHAMIIYGTTIVIISLIHKYRVKLTGNLEHAIRHNKKSDELIKELRKKNKQLSKLNKDMREKEKQLNQLAFYDILTKVANRKMLINQMDFLISISKNFSVVFIDLDNFKKINDTMGHQAGDSLLKAVTLRIGDYIHPKDMFGRLGGDEFVLIVQRELGNEEILSYVEGLRQQLIRPFRIKKAELTITASFGISAFPKDGRTSSELLKFSDIAMYQVKSMGKNDVEFFTMSMKRKKIKKL
SIO_010081: CPHY_RS00980
subclass of: SO_0000673
so part of: CPHY_RS00980
location: 218439..219458
location: region:218439-219458:1
so has part: feature:218439-219458:1:exon

WP_012198203.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:218439-219458:1:exon

CPHY_RS00985
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00985
old locus tag: Cphy_0174
so part of: sequence
location: 219658..219915
location: region:219658-219915:1
so has part: feature:219658-219915:1:exon
subclass of: SO_0000010

position:219658:1
position: 219658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219915:1
position: 219915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219658-219915:1:exon

CPHY_RS00985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00985
old locus tag: Cphy_0174
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQSSILPRFQDLREATIGGLRALEDISFEDSKVKPFYALIDGSYIFIGDDCETLYGEAHWIENGTITKICDKGECKQLTLDKGNS
SIO_010081: CPHY_RS00985
subclass of: SO_0000673
so part of: CPHY_RS00985
location: 219658..219915
location: region:219658-219915:1
so has part: feature:219658-219915:1:exon

WP_012198204.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:219658-219915:1:exon

CPHY_RS00990
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00990
old locus tag: Cphy_0175
so part of: sequence
location: complement(220274..222049)
location: region:220274-222049:-1
so has part: feature:220274-222049:-1:exon
subclass of: SO_0000010

position:220274:-1
position: 220274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222049:-1
position: 222049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220274-222049:-1:exon

CPHY_RS00990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00990
old locus tag: Cphy_0175
EC number: 4.2.1.53
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005807027.1
GO function: GO:0071949 - FAD binding [Evidence IEA]; GO:0050151 - oleate hydratase activity [Evidence IEA]
GO process: GO:0006631 - fatty acid metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: oleate hydratase
translation: MYYSSGNYEAFARPVKPEGADRKSTYLIGSGLASLSAACFLVRDGQLKGERIHILEKDKLPGGACDGYKYSDRGFVMRGGREMDNHFECMWDIMRSIPSIETEGVSVLDEYYWLNKSDPNYSLMRATVNRGEDAHTDGKFGLSDKGAMEIMHLFFTPDEELFEKRIDELFSKEVLNSNFWMYWRTMFAFENWHSALEMKRYIQRYIHHIGGLPDFKALRFTKYNQYESLILPMMKYLEEHNVQFHYDTQVVNVEFDIKKDKKVAKRIVCIHENQEESIDLSEDDLIFISNGGCVENSSLGDQNHTAEYNTEIKAGSGWDMWRKIAAQDPSFGNPDKFCGDPEKTNWMSATVTTLDDKIPPYVQNICKRDPFSGKVVTGGIVTATDSNWLLSWTFNRQPQFRNQPKNQLVGWIYGLFSDVPGNFVKKTMRECTGKEICMEWLYHMGVPENQIEQLAENSANTVPCMMPYITAFFMPRNTEDRPLVVPEGSVNFAFIGQFAETKRDTIFTTEYSVRTGMEAVYTLLDIDRGVPEVWGSVYDVRDLLNASVQLTDGKKITDVDLGFKGKMALKEGLKKLKDTEIEKLLKEYNVI
SIO_010081: CPHY_RS00990
subclass of: SO_0000673
so part of: CPHY_RS00990
location: complement(220274..222049)
location: region:220274-222049:-1
so has part: feature:220274-222049:-1:exon

WP_012198205.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:220274-222049:-1:exon

CPHY_RS00995
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS00995
old locus tag: Cphy_0176
so part of: sequence
location: complement(222247..222819)
location: region:222247-222819:-1
so has part: feature:222247-222819:-1:exon
subclass of: SO_0000010

position:222247:-1
position: 222247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222819:-1
position: 222819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:222247-222819:-1:exon

CPHY_RS00995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS00995
old locus tag: Cphy_0176
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012344652.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TetR-like C-terminal domain-containing protein
translation: MAQQYTRKVIREVFVQMLNERPLSKITVKDIVNECEINRNTFYYYYPDLYAILAEIFQTELQTVIEEYNDTLSWEESFLAATKFALENKIAIYHVYNSIQKEELEKYLFNVAGNVMTRYVEDASKDLKASGEDKRLIVSFYQSALTEMLLHWISSGMKEDPPKVIHRIGLLFDGNIALSLERSAKLNDSW
SIO_010081: CPHY_RS00995
subclass of: SO_0000673
so part of: CPHY_RS00995
location: complement(222247..222819)
location: region:222247-222819:-1
so has part: feature:222247-222819:-1:exon

WP_012198206.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:222247-222819:-1:exon

CPHY_RS01000
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01000
old locus tag: Cphy_0177
so part of: sequence
location: 223270..223944
location: region:223270-223944:1
so has part: feature:223270-223944:1:exon
subclass of: SO_0000010

position:223270:1
position: 223270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223944:1
position: 223944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223270-223944:1:exon

CPHY_RS01000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01000
old locus tag: Cphy_0177
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004612547.1
GO function: GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YkgJ family cysteine cluster protein
translation: MDRKVSLSEISDGKLYGLNDMVKAGCNDCKGCSACCKGMGKSIILDPFDIFRFTTNLGKSFEELLNDKIELNIVDGVILPNLKMVGESESCAFLNNEGRCSIHANRPGICRIFPLGRYYEDHAYQYILQIHECKYKNRSKVKVSKWIDTNDSKRNEQFIIDWHYFLKDLQEQIKKSADSTWIRNINLYLLNAFYQKPYVKDKDFYLQFEERLELMKSYLVSLER
SIO_010081: CPHY_RS01000
subclass of: SO_0000673
so part of: CPHY_RS01000
location: 223270..223944
location: region:223270-223944:1
so has part: feature:223270-223944:1:exon

WP_012198207.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:223270-223944:1:exon

CPHY_RS01005
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01005
old locus tag: Cphy_0178
so part of: sequence
location: 224031..224828
location: region:224031-224828:1
so has part: feature:224031-224828:1:exon
subclass of: SO_0000010

position:224031:1
position: 224031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224828:1
position: 224828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224031-224828:1:exon

CPHY_RS01005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01005
old locus tag: Cphy_0178
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012993023.1
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MDFESLRRLQKDSERVDALYQIMKEDSRLNHSKAARVEFITTTTYIEKYLKEGDRILDLGAGAGEYSLYFARKGYEVTAVELASANIEAFQKKITGEDKIELIHGNALDLSCFAEDSFDVVLLFGPLYHLSKEEDRQKCITEAKRVLKPTGTIFFAFILNDMVILTELYYRQDFFLENSYDHETFKVEDFPFVFFTVDQTREMLQAAGIQILKEIASDGVSELLEDKINAMDEESYKQYVRYHLYCCEKPEMLGRSNHLLTIGKK
SIO_010081: CPHY_RS01005
subclass of: SO_0000673
so part of: CPHY_RS01005
location: 224031..224828
location: region:224031-224828:1
so has part: feature:224031-224828:1:exon

WP_012198208.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:224031-224828:1:exon

CPHY_RS01010
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01010
old locus tag: Cphy_0179
so part of: sequence
location: 225030..225293
location: region:225030-225293:1
so has part: feature:225030-225293:1:exon
subclass of: SO_0000010

position:225030:1
position: 225030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225293:1
position: 225293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225030-225293:1:exon

CPHY_RS01010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01010
old locus tag: Cphy_0179
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002583461.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: autorepressor SdpR family transcription factor
translation: MSFQESFKALSDPTRREIINILKRGKLTAGEIVEHFDMTGATISHHLTILKAAGLVTDEKKGKYIYYELNLSVVEEIMTWFASLKEE
SIO_010081: CPHY_RS01010
subclass of: SO_0000673
so part of: CPHY_RS01010
location: 225030..225293
location: region:225030-225293:1
so has part: feature:225030-225293:1:exon

WP_012198209.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:225030-225293:1:exon

CPHY_RS01015
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01015
old locus tag: Cphy_0180
so part of: sequence
location: 225379..226032
location: region:225379-226032:1
so has part: feature:225379-226032:1:exon
subclass of: SO_0000010

position:225379:1
position: 225379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226032:1
position: 226032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225379-226032:1:exon

CPHY_RS01015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01015
old locus tag: Cphy_0180
inference: COORDINATES: protein motif:HMM:NF025015.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SdpI family protein
translation: MKKLFHQDNYKLWLIAIIALLIAIIAYPFLPAEIPFHFGANGEVDQYGGPWTIFLMPAIIIILIVLAELLRIIDPKRQSYAKFSRHYYGVYFLISLLFMFLEIYIIAMSFGIEVMNINHLMPAIIGILFLALGNSMPKFKHNYFCGIRTCYTLANEDVWFMTHRFAGKLWFLGGFCMILTILLPAKANWIVSFIIVAILGIIPVLYSYFAYQRINKK
SIO_010081: CPHY_RS01015
subclass of: SO_0000673
so part of: CPHY_RS01015
location: 225379..226032
location: region:225379-226032:1
so has part: feature:225379-226032:1:exon

WP_012198210.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:225379-226032:1:exon

CPHY_RS01020
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01020
old locus tag: Cphy_0181
so part of: sequence
location: 226406..227530
location: region:226406-227530:1
so has part: feature:226406-227530:1:exon
subclass of: SO_0000010

position:226406:1
position: 226406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227530:1
position: 227530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226406-227530:1:exon

CPHY_RS01020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01020
old locus tag: Cphy_0181
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009256718.1
GO function: GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cysteine desulfurase family protein
translation: MIYLDYAANTPASEEVLKVYLETEQQFIANPNSSHPLGILAKERLTEVTKELATLLKVEPEQIIPTSGASEANNLAIKGITYGYRENGRHIISTCLEHPSVSGSLTFLQSLGYEIDLVDILPNGQVDLEHLKELLRKDTVLVSICTVDSELGTVQPIKEIAKILESYENCFFHTDATQGFGKIEVDLSLADLTTFTPHKFYGLNGTGVLVKKKDVVLLPQIHGGSSTTIYRSGTPMLSNVVALTEAVNLSLEHYEDRLNRVVSLRKQFESKLSKYPNVRINSTECGVPHILNISVKGVRAITMKEHLEEYGICISIKSACSATMTPSRPVYAVTKDKKNALSSFRISLSHLTTEEEVEKFFEGFDASYQKAMKN
SIO_010081: CPHY_RS01020
subclass of: SO_0000673
so part of: CPHY_RS01020
location: 226406..227530
location: region:226406-227530:1
so has part: feature:226406-227530:1:exon

WP_012198211.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:226406-227530:1:exon

CPHY_RS01025
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01025
old locus tag: Cphy_0182
so part of: sequence
location: 227708..228574
location: region:227708-228574:1
so has part: feature:227708-228574:1:exon
subclass of: SO_0000010

position:227708:1
position: 227708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228574:1
position: 228574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227708-228574:1:exon

CPHY_RS01025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01025
old locus tag: Cphy_0182
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013657256.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA 2-thiocytidine(32) synthetase TtcA
translation: MERYQEIERSIVKKYRKEIWRPFVKAVQEYELIKEGDKIAVCISGGKDSMLLAKCMQELQKHGKIPFELVFLVMDPGYNEINRQTIINNAKLLNIPIEIFESNIFDIVAEVDESPCYLCARMRRGYLYKNAKAHGCNKIALGHHFDDVIETILMGMLYSGQIQTMMPKLHSTNFEGMELIRPMYYVKEDAILHWKQFHELQFIQCACRFTENCTLCDNGGGGSKRQEMKALVKKFRSQSNIIDSNIFRSVENVNLDTVIAYKTKGTKHHFLDTYDREDSVDLKDTDLQ
SIO_010081: CPHY_RS01025
subclass of: SO_0000673
so part of: CPHY_RS01025
location: 227708..228574
location: region:227708-228574:1
so has part: feature:227708-228574:1:exon

WP_012198212.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:227708-228574:1:exon

CPHY_RS01030
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01030
old locus tag: Cphy_0183
so part of: sequence
location: 229100..229969
location: region:229100-229969:1
so has part: feature:229100-229969:1:exon
subclass of: SO_0000010

position:229100:1
position: 229100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229969:1
position: 229969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229100-229969:1:exon

CPHY_RS01030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01030
old locus tag: Cphy_0183
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006775325.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: radical SAM protein
translation: MHYKEAKGILSSTNGMNLYRGCTHGCIYCDARSKCYQMDHEFEDIEVKINAPTLLESALRSKRKKCMIGTGAMSDPYLSLEPELKLTRTCLSLINQYGFGLSIQTKSNRILRDIDLLKSIHEKSKCVVQITLTTYDEEICKIIEPGVCTTRERFEVLLKMKENNIPTVVWLDPILPFITDTEENLRGILNYCVEAKVYGIICFGMGLTLREGNREYFYQQLDKHFPGLKKRYQETYGYAYEIMSKHNDKLMKIFYDICQNNHIVCDNKKVFQYLHEYEEKNKTEQLSLF
SIO_010081: CPHY_RS01030
subclass of: SO_0000673
so part of: CPHY_RS01030
location: 229100..229969
location: region:229100-229969:1
so has part: feature:229100-229969:1:exon

WP_012198213.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:229100-229969:1:exon

CPHY_RS01035
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01035
old locus tag: Cphy_0184
so part of: sequence
location: 230082..230633
location: region:230082-230633:1
so has part: feature:230082-230633:1:exon
subclass of: SO_0000010

position:230082:1
position: 230082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230633:1
position: 230633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230082-230633:1:exon

CPHY_RS01035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01035
old locus tag: Cphy_0184
inference: COORDINATES: protein motif:HMM:NF040334.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6144 family protein
translation: MGEIVNTRVKRLYDSIEKHVGKEKADTLLTKITLPKSASPQKRFEWACNVCTLLEENFDEDTICEIRMDCCCKPSMLHMKKLKELYSKSESLPGYANLASNETPAKFWAEGSVLYMSYPECYCSDVKHTKGTMSKTWCLCTLGYTKYMYEYIFGCAVKVELLESVKLGNNRCVIRIESEEKPV
SIO_010081: CPHY_RS01035
subclass of: SO_0000673
so part of: CPHY_RS01035
location: 230082..230633
location: region:230082-230633:1
so has part: feature:230082-230633:1:exon

WP_012198214.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:230082-230633:1:exon

CPHY_RS01040
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01040
old locus tag: Cphy_0185
so part of: sequence
location: 230930..231298
location: region:230930-231298:1
so has part: feature:230930-231298:1:exon
subclass of: SO_0000010

position:230930:1
position: 230930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231298:1
position: 231298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230930-231298:1:exon

CPHY_RS01040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01040
old locus tag: Cphy_0185
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009263598.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GntR family transcriptional regulator
translation: MKIDFESGKPIFQQIAEQIEDAIFIGAFEEGTQIPSTTEVSTSFQINPATVLKGMNQLMEDGILYKKRGVGVFVCEGARNQIVGKRKEKFYESYVESLITEARKLDLTKQDIIELIERGLAK
SIO_010081: CPHY_RS01040
subclass of: SO_0000673
so part of: CPHY_RS01040
location: 230930..231298
location: region:230930-231298:1
so has part: feature:230930-231298:1:exon

WP_012198215.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:230930-231298:1:exon

CPHY_RS01045
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01045
old locus tag: Cphy_0186
so part of: sequence
location: 231295..232161
location: region:231295-232161:1
so has part: feature:231295-232161:1:exon
subclass of: SO_0000010

position:231295:1
position: 231295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232161:1
position: 232161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231295-232161:1:exon

CPHY_RS01045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01045
old locus tag: Cphy_0186
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014357245.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MNGITIEQVSKRFGNVVALDNINLSLKAGKIYGLLGRNGAGKSTLLNVITNRLFAEDGKVVIDGENATENDETLSKIFYMSEGNCYPENYTVKDVFQAAKLFYGEFDFEYAKRLCKKFDLNIKKKIKGLSTGYGSIYKIITALCLPVPYLLLDEPVLGLDANHRELFYQLILEDYNRYERTIIISTHLIEEVSGLIEEVIIINKGKVIRQESCEEILSSGYTVSGNAKDIEQFIKDKNVLSETSLGGLRSVCILGKLNRAEIPDTLEITKLDLQKLFVNLTSEKEEME
SIO_010081: CPHY_RS01045
subclass of: SO_0000673
so part of: CPHY_RS01045
location: 231295..232161
location: region:231295-232161:1
so has part: feature:231295-232161:1:exon

WP_012198216.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:231295-232161:1:exon

CPHY_RS01050
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01050
old locus tag: Cphy_0187
so part of: sequence
location: 232161..232895
location: region:232161-232895:1
so has part: feature:232161-232895:1:exon
subclass of: SO_0000010

position:232895:1
position: 232895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232161-232895:1:exon

CPHY_RS01050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01050
old locus tag: Cphy_0187
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLGRAFKFQMKEIIKSIATFYGFLFLFLFLFITISNNSGDRNGSIGGFELFTMVMIFITMLNIIRSDFHLFLQHGYSRKTLFLSTILCIITTSSVVALMESILFKIFSHFVTYNGMYIQGYGAAYLSDVGVKGMVDEYFWKFFLYILAGAIGIFISLLYYRMNKLQKMIVSAGVPALLFVIYPISDEFLFDGALSKISAKIMNFYTGYAFGSEPYVNVLCNIALFALFGAFSFLLLRRCNYKK
SIO_010081: CPHY_RS01050
subclass of: SO_0000673
so part of: CPHY_RS01050
location: 232161..232895
location: region:232161-232895:1
so has part: feature:232161-232895:1:exon

WP_012198217.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:232161-232895:1:exon

CPHY_RS01055
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01055
old locus tag: Cphy_0188
so part of: sequence
location: complement(232976..234154)
location: region:232976-234154:-1
so has part: feature:232976-234154:-1:exon
subclass of: SO_0000010

position:232976:-1
position: 232976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234154:-1
position: 234154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232976-234154:-1:exon

CPHY_RS01055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01055
old locus tag: Cphy_0188
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016292803.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amidohydrolase
translation: MKLLIKNGIILTMSETKYQPGDLLIEDGKIKEIAPTISISEDNSLITIPATNCIVMPGLIEAHCHVGISEEKKGKEGDDSNETSNPVSPYLRAIDAINPLDPAFHDAIRAGITGIMVGPGSTNVVGGQFTFLKTAGSRCIEDLAILNPAAMKVAFGENPKSFYGEQAMMPFTRMGIAFLLREELWKAKQYLKKKKKAEETSEEFDEDFRLEPWIPVLEKKIPLKAHVHRTDDILTAIRIAKEFELDMTLDHCSEGHLISEEILDSGFPAIVGPDLASRNKIEVQNMAFKTAGELSKAGVLVSITTDHPVSLIQTLPICTGFAVKNGLPMEDGLRAITINAAKICRVDHRIGSLEVGKDADIAIFDGNPLEVFTNCLYTIIDGKIIYQYHKPK
SIO_010081: CPHY_RS01055
subclass of: SO_0000673
so part of: CPHY_RS01055
location: complement(232976..234154)
location: region:232976-234154:-1
so has part: feature:232976-234154:-1:exon

WP_012198218.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:232976-234154:-1:exon

CPHY_RS01060
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01060
old locus tag: Cphy_0189
so part of: sequence
location: 234483..234971
location: region:234483-234971:1
so has part: feature:234483-234971:1:exon
subclass of: SO_0000010

position:234483:1
position: 234483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234971:1
position: 234971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234483-234971:1:exon

CPHY_RS01060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01060
old locus tag: Cphy_0189
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011967758.1
GO function: GO:0008251 - tRNA-specific adenosine deaminase activity [Evidence IEA]
GO process: GO:0002100 - tRNA wobble adenosine to inosine editing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: deaminase
translation: MERRDKVNYYLDIAETVSKRSTCLRRIYGAVIVNNDEIIATGYVGAPRGRANCSDLNYCIRTKLSVPRGERYELCRSVHAEANAIISAPREKMLGSTLYLVGFEMPDMTYIQNANSCSMCKRMIINAGIESVVIRDSKEDYRIIEVNDWIENDESLDGVRGY
SIO_010081: CPHY_RS01060
subclass of: SO_0000673
so part of: CPHY_RS01060
location: 234483..234971
location: region:234483-234971:1
so has part: feature:234483-234971:1:exon

WP_012198219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:234483-234971:1:exon

CPHY_RS01065
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01065
old locus tag: Cphy_0190
so part of: sequence
location: 235186..236616
location: region:235186-236616:1
so has part: feature:235186-236616:1:exon
subclass of: SO_0000010

position:235186:1
position: 235186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236616:1
position: 236616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235186-236616:1:exon

CPHY_RS01065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01065
old locus tag: Cphy_0190
EC number: 3.-.-.-
inference: COORDINATES: protein motif:HMM:NF012371.2
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: serine hydrolase
translation: MNMTNNKKLIPEKAVKSFLKQIQGDRVNLHGFLMMLEDEVIYEGYWEPFHAESMHRMYSVGKSFTSIAIGLLEEEGKLKLTDTICPYFEDKLPKEGVHPWIKETTIRDMLCMTTAHHTTTYKRFPEDDWVKSFFHVEPTHKPGTIFSYDTSSTHVLSALVERLTGMELLDYLRVKFLDRIGFSKDAKILKDPMGVSQGGSGLICTLRDLSLVANVCLHMGEYRGEQLLPREYLMEATKKQVDTVLQPYLDEQFGYGYQIWKTRHNGFCFYGMGGQLAVCFPEHNFVFATTADTQGSPNGLKNIYDAFYQQVYPYLEGVTLDDSEETLSDIINHLRVPIASSIFEPYIEGKKIMAQSYRMQPNQMGLEELTVTIDGEVGHFDYKMKQKSHRLTFHLKEAYHQNFPDTQFECMCSGVWLTEDVLYIKTNIIEEYFASMNMLLVFREDTVTICMKKAAETILQDYEGFATGTRTYGGQA
SIO_010081: CPHY_RS01065
subclass of: SO_0000673
so part of: CPHY_RS01065
location: 235186..236616
location: region:235186-236616:1
so has part: feature:235186-236616:1:exon

WP_012198220.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:235186-236616:1:exon

CPHY_RS01070
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01070
old locus tag: Cphy_0191
so part of: sequence
location: 236617..238155
location: region:236617-238155:1
so has part: feature:236617-238155:1:exon
subclass of: SO_0000010

position:236617:1
position: 236617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:238155:1
position: 238155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236617-238155:1:exon

CPHY_RS01070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01070
old locus tag: Cphy_0191
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012739216.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycoside hydrolase family 43 protein
translation: MRQEYCNPVQRGFFPDPSVIRVGDDYYMVNSSFQYFPAIPISHSKDMVHWHIIGHAITNPEYLPLEDIKDSHGIWAPDISYHDGTFYIYATLRLNGSGTRGNNVLRRQLLVTSKTPEGPYSAPTWLEVDAIDPSHFVDDDGKHYMVIAKAATVIPLSDDGKRVIGEPFAAWTGTGECCPEGPHILKKDGYYYAIVAEGGTGYGHGINVARSKNLYGPYEECPYNPVLRQFKEDSPIQRTGHGKLVQTQNGDWWMYYLLGRPNQGRYTTVGRESGLDPVTWTEDGWFIVNEGKGPSERQIAPDLKPHVFERNLKDDFEEEKLNLDWEFVRNPDYGSCSSTERPGYFRIWTRDGRLDEIRAKNTLVRREQELSYEAETKVEFYPTKDGEQAGLTCYYSTATYARFSLCYEGGRKLQLVINRNHGEELMAEVLDIKERAVYLKVIVEKLTRSFYYSYDGKEWTLAGVLENCIYLCDEGVPDDPKRHTGTLVGIYANNGGCGSRIPADFDYFYYQE
SIO_010081: CPHY_RS01070
subclass of: SO_0000673
so part of: CPHY_RS01070
location: 236617..238155
location: region:236617-238155:1
so has part: feature:236617-238155:1:exon

WP_012198221.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:236617-238155:1:exon

CPHY_RS01075
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01075
old locus tag: Cphy_0192
so part of: sequence
location: complement(238298..240091)
location: region:238298-240091:-1
so has part: feature:238298-240091:-1:exon
subclass of: SO_0000010

position:238298:-1
position: 238298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240091:-1
position: 240091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238298-240091:-1:exon

CPHY_RS01075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01075
old locus tag: Cphy_0192
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008980426.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein/permease
translation: MLQVNHVTKKYGNAIILENSSYTFPSKGIVCLMGASGGGKTTLLNLLAGFDTDYEGEILVGGTLISGMDAEKLCQYRRDNIGFVFQNYHLLPGYTASENVLLASALSKDSPDASRQKAATLLTRLGIGEKENQKVENLSGGQKQRVAIARALMSDPQIIFADEPTGALDRTTSTEIMKLLQEISRDRLVVVITHDAKICEFADEIIHIKEKKIIEERVIRRDVTDEKALVVGSSPKISIFSRAVKNFKVHLTRYAAVSLSISIGLLAFLFSLSFGNVMERSIDDFKTKNTAFNNGYIKGADDGTILEYLKKDERIENVYYQYKLRNLTLSTGDKSEQIAEKFPTPKATESLSYGVMPRLGQNEIAITPSLAKKFDSDIKKLLGKEFILELDGQKHKLTMSGIYNAGYDDFIVSSDIEQQFYKNITDEKNYSISYDVKEFSDIVGVSNVLKLRGITAKTASDEVYALQNTFHSLNKLFLVISFLILAISLFICTILLNKLQNTRYHEIGLLSALGFSRQQISSMIRCENLLLSSLATVVNLILLFASILLGKLLDFALIFTGAQVVLSIVATFAIVMLLSAVASYKLIRTEPAIALKK
SIO_010081: CPHY_RS01075
subclass of: SO_0000673
so part of: CPHY_RS01075
location: complement(238298..240091)
location: region:238298-240091:-1
so has part: feature:238298-240091:-1:exon

WP_012198222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:238298-240091:-1:exon

CPHY_RS01080
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01080
old locus tag: Cphy_0193
so part of: sequence
location: complement(240094..242037)
location: region:240094-242037:-1
so has part: feature:240094-242037:-1:exon
subclass of: SO_0000010

position:240094:-1
position: 240094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242037:-1
position: 242037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240094-242037:-1:exon

CPHY_RS01080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01080
old locus tag: Cphy_0193
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008980425.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein/permease
translation: MFLIRNVSKQFGDEYALRNISMTIGKGLNFIIGSSGSGKTTLLKIISGMEQKFDGEVFYCGQDVKALTEQEKSYYYNNIFGFVWQDFNLLDDLTVLENIMLPQFLKHGQDKKAIMKVLRELKISELDNQKVGKLSGGQKQRVAIARELMKNPQVIIADEPTSALDEKSSKTTMDILRDIAKNRTVIVVTHDTSLIDQSAKVYELDKGELTAATEEVSIKEEKADTLKPHKLSFASACKLSLSNIKSKWNRTITTALSLVVAATLLLVTVSGAITDSSQSAFDKLFETYGESILDISIVGSFMSAGGTDGSQKDEPNANVDQNIDGLYDKYLNDKRVSHIVFTQHYNDIKVSADGKEYSIDTGSSVPTVNKLIAGKMPMGEDNEIVVPKSFIEKLGVSAEEALGKTIDFKGNIYNWDSGEPVSMPVSTTANIVGVVDTTVKYEYGGQLMEYSVDDAFFFSRSALNEMRTQADIKNGEGNFTIRTKTPADLIAIKDELNAEGIVPLGRFELVEDMVRLNDQTTEQSGSAILVIGILAAVIILSVSLMTALTRRREYAIFKVSGYANQHLLLMTASEFMILAAASGILFLCISPLINLATTALWSVNILNGNLLFAGVLLVLVMGILACTTTTIAGIMTKASASLKTGDR
SIO_010081: CPHY_RS01080
subclass of: SO_0000673
so part of: CPHY_RS01080
location: complement(240094..242037)
location: region:240094-242037:-1
so has part: feature:240094-242037:-1:exon

WP_012198223.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:240094-242037:-1:exon

CPHY_RS01085
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01085
old locus tag: Cphy_0194
so part of: sequence
location: complement(242049..242735)
location: region:242049-242735:-1
so has part: feature:242049-242735:-1:exon
subclass of: SO_0000010

position:242049:-1
position: 242049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242735:-1
position: 242735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242049-242735:-1:exon

CPHY_RS01085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01085
old locus tag: Cphy_0194
inference: COORDINATES: protein motif:HMM:NF012787.2
GO function: GO:0016209 - antioxidant activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: redoxin domain-containing protein
translation: MKKLITILMAALIATSITGCAKKQTAQDEDICPGKLLGEEGAPMAMAEGFDQTVDMTFHTKDTNGTPVTNEIFSGTERGVWLVFWQTDNDKSLTELTRLNDMLPIAKENGYKIVGIVMDGEENSDKAKEMTTNLGFTNIIWNDEVASRYNGISNFFSKEFYENNKELYSQFIVMPNLGDPVSGLANSRGQLQSSCTMIPMSNEKIEEQWKNNNSNATFEELQEEAFGK
SIO_010081: CPHY_RS01085
subclass of: SO_0000673
so part of: CPHY_RS01085
location: complement(242049..242735)
location: region:242049-242735:-1
so has part: feature:242049-242735:-1:exon

WP_012198224.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:242049-242735:-1:exon

CPHY_RS01090
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01090
old locus tag: Cphy_0195
so part of: sequence
location: complement(242919..244052)
location: region:242919-244052:-1
so has part: feature:242919-244052:-1:exon
subclass of: SO_0000010

position:242919:-1
position: 242919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244052:-1
position: 244052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242919-244052:-1:exon

CPHY_RS01090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01090
old locus tag: Cphy_0195
inference: COORDINATES: protein motif:HMM:NF014567.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MIKKLSIRARLTALSILALTTCCIGLTTILNLSAYHMADVIEAIPITPAYEVSKDATAIEQAPLLSRTTTTPSEGSQIARTRFLYQSIIYMVLIVTIGGGLTYYITGKALMPLRVLSHQMKNRTVHNLSEDLPVPEIHDEIADLTVSFNQMSSKLEEAFAMQKRFSQSAAHELRTPLTVLRTKVDVFKKKKEHTSEEYDNLLSVITTHTNRLSELVKDLLDLTNMDDLDYDEQIELNALLQDVVEELIPLTKEKNITINVNGTSKSIAGNKSLLHRAFYNLVENAIKYNTENGTVDICIGDSADHAVVTIADTGIGIPKELEELIFEPFFRVDKSRSRQIGGAGLGLSTVKTIIEKHNGVVSVSENETAGSRFTIQL
SIO_010081: CPHY_RS01090
subclass of: SO_0000673
so part of: CPHY_RS01090
location: complement(242919..244052)
location: region:242919-244052:-1
so has part: feature:242919-244052:-1:exon

WP_012198225.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:242919-244052:-1:exon

CPHY_RS01095
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01095
old locus tag: Cphy_0196
so part of: sequence
location: complement(244049..244729)
location: region:244049-244729:-1
so has part: feature:244049-244729:-1:exon
subclass of: SO_0000010

position:244049:-1
position: 244049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244729:-1
position: 244729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244049-244729:-1:exon

CPHY_RS01095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01095
old locus tag: Cphy_0196
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005350878.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator transcription factor
translation: MRILIVEDEIDLCDTIAEGLQIDGYAVDTCYHGDVAYELISTETYDLVVLDLNLPGMDGIDILSDLRKTNKDMKILILSARSSVSDKVLGLDIGANDYLAKPFAFEELEARIRSLLRRSFVQENSVLVWNEISLDTVGRTVSVSGIDVTMTKKELALLEYFLLNQSKVISQEELMEHVWNMEADSFSNAVRVHIASLRKKLKIALGYDPIATKIGEGYFLNGGGSL
SIO_010081: CPHY_RS01095
subclass of: SO_0000673
so part of: CPHY_RS01095
location: complement(244049..244729)
location: region:244049-244729:-1
so has part: feature:244049-244729:-1:exon

WP_012198226.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:244049-244729:-1:exon

CPHY_RS01100
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01100
old locus tag: Cphy_0197
so part of: sequence
location: 244877..245491
location: region:244877-245491:1
so has part: feature:244877-245491:1:exon
subclass of: SO_0000010

position:244877:1
position: 244877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245491:1
position: 245491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244877-245491:1:exon

CPHY_RS01100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01100
old locus tag: Cphy_0197
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008980421.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKTTVALFTALLVLSLAGCSSAPSDEKIKTALEDGTITIEDAKEKGWIDDEWVEANFEPIKAKTKIYLFDSFQTTYLDGTPASSELIEGKMCLVFFNTAKDGTMDKLKVFNDIREEMEDIGVPILGIITDEQLEDAKEKLNDIKFPILVYNEEMQKSLAEFNELIDSDVVSIFTKEGGFYSAWNSGCDSESLLDFARGLADEE
SIO_010081: CPHY_RS01100
subclass of: SO_0000673
so part of: CPHY_RS01100
location: 244877..245491
location: region:244877-245491:1
so has part: feature:244877-245491:1:exon

WP_157668635.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:244877-245491:1:exon

CPHY_RS22270
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS22270
so part of: sequence
location: 245481..245615
location: region:245481-245615:1
so has part: feature:245481-245615:1:exon
subclass of: SO_0000010

position:245481:1
position: 245481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245615:1
position: 245615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245481-245615:1:exon

CPHY_RS22270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS22270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008980420.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CD1871A family CXXC motif-containing protein
translation: MKNKLPIFLFFSAITLIGIGAFRGEALEVLNKGINLCLECVGIG
SIO_010081: CPHY_RS22270
subclass of: SO_0000673
so part of: CPHY_RS22270
location: 245481..245615
location: region:245481-245615:1
so has part: feature:245481-245615:1:exon

WP_278183984.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:245481-245615:1:exon

CPHY_RS01105
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01105
old locus tag: Cphy_0198
so part of: sequence
location: 245608..246474
location: region:245608-246474:1
so has part: feature:245608-246474:1:exon
subclass of: SO_0000010

position:245608:1
position: 245608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246474:1
position: 246474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245608-246474:1:exon

CPHY_RS01105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01105
old locus tag: Cphy_0198
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016148436.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4Fe-4S binding protein
translation: MAKNKNRWKVQAAATLLTNSHISGFFTGKIYKGKLKSICVPGLNCYSCPGAIGSCPIGSLQAVIGSSKFKFSYYIVGLLILFGVLLGRLVCGFLCPFGWFQELLHKIPTKKFSTKKLKALTYMKYVILVVFVIILPMTIINEVGMGDPWFCKWLCPAGILEGALPLSIVDSGIRAALGTLFTWKSCLLVGIVTLSVFFYRPFCKWICPLGAFYALFNKLSFYRFNIDKEKCTSCKACAKVCKMDVEVYKSPNHNECIRCGDCIRTCPHGAICKSINLRKEDKKNEKMA
SIO_010081: CPHY_RS01105
subclass of: SO_0000673
so part of: CPHY_RS01105
location: 245608..246474
location: region:245608-246474:1
so has part: feature:245608-246474:1:exon

WP_012198228.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:245608-246474:1:exon

CPHY_RS01110
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01110
old locus tag: Cphy_0199
so part of: sequence
location: 246458..246991
location: region:246458-246991:1
so has part: feature:246458-246991:1:exon
subclass of: SO_0000010

position:246458:1
position: 246458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246991:1
position: 246991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246458-246991:1:exon

CPHY_RS01110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01110
old locus tag: Cphy_0199
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006574590.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TlpA disulfide reductase family protein
translation: MKKWLSMLILAICMFSLVACSNNEIEGTKQPFPEFEGVDFEGNSVSNDIFKDYDATIINFWTNGCGSCIAEMPELEEYYQKFKEKNINLIAVAASAGDSDEMRLGAEKILKEKGVTFTNIIPDINSSFYKDFICEITGFPITYIVDSEGNMIGAPLIGVVKKQEDTLMKRLDKITEQ
SIO_010081: CPHY_RS01110
subclass of: SO_0000673
so part of: CPHY_RS01110
location: 246458..246991
location: region:246458-246991:1
so has part: feature:246458-246991:1:exon

WP_012198229.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:246458-246991:1:exon

CPHY_RS01115
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01115
old locus tag: Cphy_0200
so part of: sequence
location: complement(247133..248617)
location: region:247133-248617:-1
so has part: feature:247133-248617:-1:exon
subclass of: SO_0000010

position:247133:-1
position: 247133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248617:-1
position: 248617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247133-248617:-1:exon

CPHY_RS01115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01115
old locus tag: Cphy_0200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003412027.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: L-fucose/L-arabinose isomerase family protein
translation: MNNIPNINVGIVAVSRDCFPMSLSNRRREAVVSSYREKGLEIYECPITIENEKDMLKALADVKAANCNALVVYLGNFGPESSETLLAKNFDGPVMFAAAAEETTSILADERGDAYCGMLNASYNLKLRNIRAYIPEYPVGTPTEVATMIEDFLPIARTIIGLQNLKIISFGPRPQDFLACNAPIKALYSLGVEIEENSELDLFASFNDHANDPRIPDVIKDMEEELGTGNNMPGILPKLAQYELTLLDWAEAHKGCKEFVVFANKCWPSFQTQFGFVPCYVNSRFASKGMPVSCEVDIYGALSEYLGVCVSEDSVTLLDINNTVPADMYDASIKGKFDYKPTDTFMGFHCGNTPSKKLSSCSMKNQKIMARSLEPNQEPNITRGTLEGDIAPGEITFFRLQSTADTVLRAYVAEGEVLPVPTQSFGSIGVFAIPEMKRFYRHVLVEKNYPHHGAVAFGHFGKAIFEVFKYFDVADIEFNRPASMMYPTENPFYR
SIO_010081: CPHY_RS01115
subclass of: SO_0000673
so part of: CPHY_RS01115
location: complement(247133..248617)
location: region:247133-248617:-1
so has part: feature:247133-248617:-1:exon

WP_012198230.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:247133-248617:-1:exon

CPHY_RS01120
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01120
old locus tag: Cphy_0201
so part of: sequence
location: 249113..251323
location: region:249113-251323:1
so has part: feature:249113-251323:1:exon
subclass of: SO_0000010

position:249113:1
position: 249113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251323:1
position: 251323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:249113-251323:1:exon

CPHY_RS01120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01120
old locus tag: Cphy_0201
inference: COORDINATES: protein motif:HMM:NF012245.2
GO process: GO:0006935 - chemotaxis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyl-accepting chemotaxis protein
translation: MMKKKGNQEEFKVKRLKRQSKKEENIEKLYKLNKELKQEKEIRQDRYSKKREKKRIFGIRLRLALAFMVPIAFIIILGITSYNKASEAMLKSYEESSFQALKTTTNYFELAMQTVELRLNQLKGYENLKNYYSGTYKSDPITEMTTYKNLQVYIETTTYSDNVLANLYVFSKRGNNLSNYGSMDLSGAELVEAYLETEEGKRDEKENGAYSWSGKHQFVDEHFVQDKSKITIPYAFSVSSAFFGNGFKQIGYMVADIRLDLFQKKLSELELSENSIFVAISKDGYEVHSNEAEGVLIADKSFYTDALASSELSGTSYVDFNGEKHLFLYSKATKSGITVCGLVPYSYLISQAKAIRTSTVIYVLIAVVSALFIAVIMSTDMGSAINKIIVALKKASEGDLTVSVNCQRKDEFGMLADSANNMISNVKGLIDKAQKVKDTISLSTDEVSDSAKQLLIATQNISTSIEEIRQGIVQQAEDSEKCLRQSDELTTRVNQVSYNVTTIEKLTEDSKAVVQQGLVSIDILRDKSEETTKITNNIIGDIESLEAESESIGKIIGVINDIAEQTNLLSLNASIEAARAGDAGRGFAVVADEIRKLAEQSVRASGEIATIISSIQGKTKLTVTTVQKSENIVKSQGNALLNTIDLFQKIDASVGMIAKELTEITSGISGIKVAENTTLNAIESISAVSEETAASSEEVDSAANRQVESVSKLREATLHLEAETKELNEALNQFRI
SIO_010081: CPHY_RS01120
subclass of: SO_0000673
so part of: CPHY_RS01120
location: 249113..251323
location: region:249113-251323:1
so has part: feature:249113-251323:1:exon

WP_012198231.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:249113-251323:1:exon

CPHY_RS01125
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01125
old locus tag: Cphy_0202
so part of: sequence
location: 251342..252022
location: region:251342-252022:1
so has part: feature:251342-252022:1:exon
subclass of: SO_0000010

position:251342:1
position: 251342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252022:1
position: 252022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251342-252022:1:exon

CPHY_RS01125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01125
old locus tag: Cphy_0202
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013656406.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MgtC/SapB family protein
translation: MAMPELLTEVNVVSTTVRLLLALVCGGILGIERGRKKRPAGFRTYMLVCIGSTLVMITSQYICSLYQNSDPARMSAQVISGIGFLGAGTIIVTGRNRVMGLTTAAGLWASACIGLSIGIGFYSGAIIGCILIFFVMSVLHRLDERVISSVKIINLYVELSQMSDVGHLMRFAKEQDLKVNDVEFVRGKSASGLALTLTLKFPKCYTQIEIIELFSTIEGVTYMEVI
SIO_010081: CPHY_RS01125
subclass of: SO_0000673
so part of: CPHY_RS01125
location: 251342..252022
location: region:251342-252022:1
so has part: feature:251342-252022:1:exon

WP_012198232.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:251342-252022:1:exon

CPHY_RS01130
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01130
old locus tag: Cphy_0203
so part of: sequence
location: 252199..253326
location: region:252199-253326:1
so has part: feature:252199-253326:1:exon
subclass of: SO_0000010

position:252199:1
position: 252199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253326:1
position: 253326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252199-253326:1:exon

CPHY_RS01130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01130
old locus tag: Cphy_0203
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007889837.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycoside hydrolase family 88 protein
translation: MDMIVKYINELLDKSTPEVPMWNIEKIKSGEKSEWNYIDGCMIKAVLEMYAITKEEKYLKFADDFIDYRVDEEGNISGYEVEKFNIDDVNAGKTLFELYDLTGKEKYRKAIDIIYKQVKTQPRTREGNFWHKLIYPQQVWLDGLYMGQPFYMEYETRFNNKKNYEDIFHQFFNVYEMLRDEKTGLYYHAFDSSREMFWCDKETGLSKHFWLRALGWYAMALLDTLDKCEPTGYEKEYERLKQIFIEYMETILKYQDESGMWYQIPDMGGRERNYLETSGSSIMAYALLKGVRLGFLPESYRENAKKAMDGICEKYLHTEEGKMSLGGICLVAGLGGKQMRDGTYDYYMSEPIVKDDAKGVGPFLLAYTELLRLQK
SIO_010081: CPHY_RS01130
subclass of: SO_0000673
so part of: CPHY_RS01130
location: 252199..253326
location: region:252199-253326:1
so has part: feature:252199-253326:1:exon

WP_012198233.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:252199-253326:1:exon

CPHY_RS01135
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: tig
locus tag: CPHY_RS01135
old locus tag: Cphy_0204
so part of: sequence
location: 253676..254716
location: region:253676-254716:1
so has part: feature:253676-254716:1:exon
subclass of: SO_0000010

position:253676:1
position: 253676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:254716:1
position: 254716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:253676-254716:1:exon

CPHY_RS01135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: tig
locus tag: CPHY_RS01135
old locus tag: Cphy_0204
EC number: 5.2.1.8
inference: COORDINATES: protein motif:HMM:TIGR00115.1
GO component: GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO function: GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO process: GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: trigger factor
translation: MKKKALLLGLCGCLMLSVVACSKKSSGGVDVTLGQYKGIEVTVEPVEITEEQVNQQLDNFNKQKGKDVKITDRTDVRNGDTVNIDYVGKVDGKEFDGGKGEGYNLEIGSNSFIDGFESGLIGKNVGETADVPVTFPNPYDSNPDLAGKDAVFTVTVNYLTDGNKEPLTDEVVKQNSDYETIDAYKDYIKTALTESAEQQAQTQKEIDIIQKAIDNTTFKNLEQKEYDAEETDMRAYYTSVASQYGVDLKTYILYFFGMSEEQFNTEIKKAAEFNVKQRLMLDEVVKTEKLDITDEEYTDKVTEYTEQNNYKTVEEFEEAYKGKENVKIALLREKALDFVINAAVVK
SIO_010081: CPHY_RS01135
subclass of: SO_0000673
so part of: CPHY_RS01135
location: 253676..254716
location: region:253676-254716:1
so has part: feature:253676-254716:1:exon

WP_012198234.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:253676-254716:1:exon

CPHY_RS01140
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01140
old locus tag: Cphy_0205
so part of: sequence
location: complement(254877..255548)
location: region:254877-255548:-1
so has part: feature:254877-255548:-1:exon
subclass of: SO_0000010

position:254877:-1
position: 254877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255548:-1
position: 255548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254877-255548:-1:exon

CPHY_RS01140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01140
old locus tag: Cphy_0205
EC number: 1.15.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013656967.1
GO function: GO:0046872 - metal ion binding [Evidence IEA]; GO:0004784 - superoxide dismutase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: superoxide dismutase
translation: MSQNNQTYPFPLLPLPYARDALSPNISEYTLYFHHEKHLKTYVDNLNKALKDYPEFQSWNLEELIVHNNLLPSAIQIPVQHNAGGVYNHNLYFYSMKSPSKPSMPPAQNTSQVTGNDFLNLINQTFGNFNEFKAKMKEAALQVFGSGYAWLVSNSRGELSIVTTANQDTPLTLGLIPLLPIDVWEHAYYLDYQNRRNDYIDEWFDLINWDFVYYLYNRQFQIY
SIO_010081: CPHY_RS01140
subclass of: SO_0000673
so part of: CPHY_RS01140
location: complement(254877..255548)
location: region:254877-255548:-1
so has part: feature:254877-255548:-1:exon

WP_012198235.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:254877-255548:-1:exon

CPHY_RS01145
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01145
old locus tag: Cphy_0206
so part of: sequence
location: 255647..256024
location: region:255647-256024:1
so has part: feature:255647-256024:1:exon
subclass of: SO_0000010

position:255647:1
position: 255647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:256024:1
position: 256024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255647-256024:1:exon

CPHY_RS01145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01145
old locus tag: Cphy_0206
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011099416.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: arsenate reductase family protein
translation: MSYQYLEYPKCTTCIKARKWLEKNQIAFESRDITVNNPTKEELKLWHEKSGLTLTKFFNTSGLLYREQNLKEKVKVMTVEEMIEILSTNGMLVKRPILVGDDFILVGFKEDEWKKRLLPPVLKRY
SIO_010081: CPHY_RS01145
subclass of: SO_0000673
so part of: CPHY_RS01145
location: 255647..256024
location: region:255647-256024:1
so has part: feature:255647-256024:1:exon

WP_012198236.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:255647-256024:1:exon

CPHY_RS01150
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01150
old locus tag: Cphy_0207
so part of: sequence
location: 256191..257048
location: region:256191-257048:1
so has part: feature:256191-257048:1:exon
subclass of: SO_0000010

position:256191:1
position: 256191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:257048:1
position: 257048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256191-257048:1:exon

CPHY_RS01150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01150
old locus tag: Cphy_0207
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005951825.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF5685 family protein
translation: MFGYIGIHKPELKMKEYYKYRAYYCGLCQVLKERYGRFGQMTLTYDMTFLIILLTSLYESKVTEEQHRCLAHPTKKHWMLRNEITEYAADMNIALTYHKFLDDWNDEKSLVGLSASKLFVRKYHKIEKKYPEKCQMIAECLAKLQKYEKENVTDLDKIAKSFADLMGEMFVYRKDEWEDTLRRLGFFLGKYIYLLDAYEDVKEDIRKDNYNPLKEKIGEPSFEEEYRQILIMMMSECSKEFERLPLILDVELLRNILYAGVWKKYDEQGTKSCNKKAIDEEGKGI
SIO_010081: CPHY_RS01150
subclass of: SO_0000673
so part of: CPHY_RS01150
location: 256191..257048
location: region:256191-257048:1
so has part: feature:256191-257048:1:exon

WP_012198237.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:256191-257048:1:exon

CPHY_RS01155
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01155
old locus tag: Cphy_0208
so part of: sequence
location: 257050..257670
location: region:257050-257670:1
so has part: feature:257050-257670:1:exon
subclass of: SO_0000010

position:257050:1
position: 257050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:257670:1
position: 257670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257050-257670:1:exon

CPHY_RS01155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01155
old locus tag: Cphy_0208
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016439578.1
GO process: GO:0006457 - protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: J domain-containing protein
translation: MTQDPYQVLGISRTATDDEVKKAYRELSRKYHPDSYINNPLSDLAEEKFKEVQEAYDTIMNERQNGGYSTFNGNFSGQSYGNQTYSEDGVLADVASKINGRRFSEALSLLSGISNRTARWYYYSAIANLGVGNNVLAADHARTAVSMEPNNSEYINLLNQLQWGSRRYTQTGSGYGRGMDAGDMCCNLCIADACCECMGGDLCTCI
SIO_010081: CPHY_RS01155
subclass of: SO_0000673
so part of: CPHY_RS01155
location: 257050..257670
location: region:257050-257670:1
so has part: feature:257050-257670:1:exon

WP_012198238.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:257050-257670:1:exon

CPHY_RS01160
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01160
old locus tag: Cphy_0209
so part of: sequence
location: 257655..258230
location: region:257655-258230:1
so has part: feature:257655-258230:1:exon
subclass of: SO_0000010

position:257655:1
position: 257655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258230:1
position: 258230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257655-258230:1:exon

CPHY_RS01160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01160
old locus tag: Cphy_0209
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHMHLSTKKIAFSGLLLALTILFTILSSVFETSTFFFLAAASYLVGINFRESGVKFGIGFYLSAILLSIILVPNKLYCLTFATISAYIVIMEIIRVYLTKKELKKLATTNRDSIEKKSNAFFYSIKFVVFNVLYLPFLFLFPGLLYSGEISPMVYILFIIGGQIIFVIYDMAYDVFIQKYWKRIKKSIIRN
SIO_010081: CPHY_RS01160
subclass of: SO_0000673
so part of: CPHY_RS01160
location: 257655..258230
location: region:257655-258230:1
so has part: feature:257655-258230:1:exon

WP_198301329.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:257655-258230:1:exon

CPHY_RS01165
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: spoIIID
locus tag: CPHY_RS01165
old locus tag: Cphy_0210
so part of: sequence
location: 258892..259182
location: region:258892-259182:1
so has part: feature:258892-259182:1:exon
subclass of: SO_0000010

position:258892:1
position: 258892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259182:1
position: 259182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258892-259182:1:exon

CPHY_RS01165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: spoIIID
locus tag: CPHY_RS01165
old locus tag: Cphy_0210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009251770.1
GO function: GO:0140110 - transcription regulator activity [Evidence IEA]
GO process: GO:0030436 - asexual sporulation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sporulation transcriptional regulator SpoIIID
translation: MKGSNLFKHKQIEERAAEIAAFIIENNATVRQTAKQFGISKSTVHKDVTERLLQVNPSLAERARVVLDLNKSERHIRGGLATKEKYLHKGKTVQGY
SIO_010081: CPHY_RS01165
subclass of: SO_0000673
so part of: CPHY_RS01165
location: 258892..259182
location: region:258892-259182:1
so has part: feature:258892-259182:1:exon

WP_012198240.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:258892-259182:1:exon

CPHY_RS01170
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: rsxC
locus tag: CPHY_RS01170
old locus tag: Cphy_0211
so part of: sequence
location: 259945..261264
location: region:259945-261264:1
so has part: feature:259945-261264:1:exon
subclass of: SO_0000010

position:259945:1
position: 259945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261264:1
position: 261264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259945-261264:1:exon

CPHY_RS01170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: rsxC
locus tag: CPHY_RS01170
old locus tag: Cphy_0211
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003503588.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: electron transport complex subunit RsxC
translation: MAAGTFKGGIHPYEGKELTKDKPTTLLLPKGDLVYPMSQHIGNPAKPIVAKGDKVLVGQKIGEADGVVSACIISSVSGTVKAVEPRLNVAGTMVESIVVENDNAYTQVEGFGVERDYETLKKEQIRSIIKEAGIVGMGGAGFPTHIKLTPKDDSAIDYLIINGSECEPYLTSDYRMMLEETNRLIKGIKITLRLFENAKAIIAVEDNKPEAISMLTHALRNENRIELKVIKTKYPQGAERVLIYAITGRKMNSTMLPSDIGCIVNNVDTMISVCRAVAENTPLIKRVVTVSGDAVKNQGNFIVLTGTNYSELVEAVGGFSAKPAKLISGGPMMGLALYSLDIPVTKTSSALLAFASDEVADMEEGPCIRCGRCVEVCPGRIVPQKLMEFAERFDDKGFEGLNGMECCECGCCSYICPAGRHLTQAFKQSKRSILNERKK
SIO_010081: CPHY_RS01170
subclass of: SO_0000673
so part of: CPHY_RS01170
location: 259945..261264
location: region:259945-261264:1
so has part: feature:259945-261264:1:exon

WP_012198241.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:259945-261264:1:exon

CPHY_RS01175
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01175
old locus tag: Cphy_0212
so part of: sequence
location: 261309..262319
location: region:261309-262319:1
so has part: feature:261309-262319:1:exon
subclass of: SO_0000010

position:261309:1
position: 261309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262319:1
position: 262319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261309-262319:1:exon

CPHY_RS01175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01175
old locus tag: Cphy_0212
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003503590.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RnfABCDGE type electron transport complex subunit D
translation: MKDMYNVSASPHVRSGVTTAQIMRDVAIALMPACLFGIYQFGFSAFLVLLVSVTSCVVSEFLYERLMKHPYRPYECSALVTGLLIGMNMPATIPVWIPMVGGVFAIIVVKQLYGGLGQNFMNPALAARCFLSICFTSRMTTFAVDAFTNSGTSSRTLYLFNYGYAGLDGVSGATPLAAMKASEAAPSLLDMFFGFHGGVIGETSAMMLLIGACYLLYRRIISLRIPLTYIATFAVFIILFSGKGFDVEYVLAQILGGGLILGAFFMATDYVTCPITKYGQILFGVCLGALTGLFRVFGGSAEGVSYAIIFCNLLVPLIEKITMPRGFGMGGKKLAK
SIO_010081: CPHY_RS01175
subclass of: SO_0000673
so part of: CPHY_RS01175
location: 261309..262319
location: region:261309-262319:1
so has part: feature:261309-262319:1:exon

WP_012198242.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:261309-262319:1:exon

CPHY_RS01180
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01180
old locus tag: Cphy_0213
so part of: sequence
location: 262309..262965
location: region:262309-262965:1
so has part: feature:262309-262965:1:exon
subclass of: SO_0000010

position:262309:1
position: 262309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262965:1
position: 262965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:262309-262965:1:exon

CPHY_RS01180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01180
old locus tag: Cphy_0213
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009662426.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0009055 - electron transfer activity [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]
GO process: GO:0022900 - electron transport chain [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RnfABCDGE type electron transport complex subunit G
translation: MQNKKKSTIIKDAIALFAITLVAAVALGFVYEITKDPIAEAEAKAKAKAYSMVFADAKLVDDKNEDVNAKVDSSKEFLTSQGFTSSTINEVCIAKDEAGNALGFVMTLTSSAGYGGDIKFTMGVKADGTLTSIEIISMNETSGLGAKANDDSFKGQYSDKNVDSFKVIKSAESKTGDDQINAISGATITSSAVTGTVNAGLAFANDLLENGVGGVTHE
SIO_010081: CPHY_RS01180
subclass of: SO_0000673
so part of: CPHY_RS01180
location: 262309..262965
location: region:262309-262965:1
so has part: feature:262309-262965:1:exon

WP_012198243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:262309-262965:1:exon

CPHY_RS01185
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01185
old locus tag: Cphy_0214
so part of: sequence
location: 262958..263719
location: region:262958-263719:1
so has part: feature:262958-263719:1:exon
subclass of: SO_0000010

position:262958:1
position: 262958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263719:1
position: 263719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:262958-263719:1:exon

CPHY_RS01185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01185
old locus tag: Cphy_0214
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013272335.1
GO process: GO:0022900 - electron transport chain [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: electron transport complex subunit E
translation: MSKALERIYNGVIKENPTFVLMLGMCPTLAVTTSAINGVGMGLTTTAVLIMSNMLISMLRKAIPDKVRMPAFIVVVASFVTIVQLLLQAYLPSLNDSLGIYIPLIVVNCIILGRAEAYASKYPVYPSIFDGVGMGLGFTVGLTLIGLFREILGAGTAFGFSIMPDSYEPFSIFVLAPGAFFVLAMLTALQNKLKLKSATNVPMADKLACGGNCSSCSGSACHSNHELLDSVKEEATKKAAAEKARAANQTEKK
SIO_010081: CPHY_RS01185
subclass of: SO_0000673
so part of: CPHY_RS01185
location: 262958..263719
location: region:262958-263719:1
so has part: feature:262958-263719:1:exon

WP_012198244.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:262958-263719:1:exon

CPHY_RS01190
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: rsxA
locus tag: CPHY_RS01190
old locus tag: Cphy_0215
so part of: sequence
location: 263734..264309
location: region:263734-264309:1
so has part: feature:263734-264309:1:exon
subclass of: SO_0000010

position:263734:1
position: 263734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264309:1
position: 264309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:263734-264309:1:exon

CPHY_RS01190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: rsxA
locus tag: CPHY_RS01190
old locus tag: Cphy_0215
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004080757.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0022900 - electron transport chain [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: electron transport complex subunit RsxA
translation: MKELLLVLIAAALVNNVVLSRFLGLCPFLGVSKKISTAAGMGGAVIFVITIASALCSVIYDVVLVPLDLKYMNTIVFIILIAALVQFIEMFLKKFSPGLYNALGVYLPLITTNCAVLGVAIDNVQKGNGFVISVVYGAGTAIGFLIAIVIMAGVRERIENNNVTKSFQGSPIVLITAGLMSIAFMGFAGLL
SIO_010081: CPHY_RS01190
subclass of: SO_0000673
so part of: CPHY_RS01190
location: 263734..264309
location: region:263734-264309:1
so has part: feature:263734-264309:1:exon

WP_012198245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:263734-264309:1:exon

CPHY_RS01195
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01195
old locus tag: Cphy_0216
so part of: sequence
location: 264384..265175
location: region:264384-265175:1
so has part: feature:264384-265175:1:exon
subclass of: SO_0000010

position:264384:1
position: 264384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265175:1
position: 265175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264384-265175:1:exon

CPHY_RS01195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01195
old locus tag: Cphy_0216
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007591388.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RnfABCDGE type electron transport complex subunit B
translation: MQGLITAAAIVGGVGLIIGILLGLAAKVFEVEVDERELIVRDLLPGNNCGGCGYPGCDGLAKAIAAGEAPVSGCPVASAEIHAKIGEVMGTEAIESERNVAFVKCNGTCDKTNVKYHYTGTPDCKKISTVPGNGEKTCIYGCMGYGSCVRACAFDAIHVVNGIAVVDKEKCVACGKCITACPNDLIEFVPVSSTCKVQCNSKDKGKDVNAACSVGCIGCMMCVKVCESDAVTVTNNLAHIDYSKCTHCGKCAEKCPRKIITIA
SIO_010081: CPHY_RS01195
subclass of: SO_0000673
so part of: CPHY_RS01195
location: 264384..265175
location: region:264384-265175:1
so has part: feature:264384-265175:1:exon

WP_041703832.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:264384-265175:1:exon

CPHY_RS01200
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01200
old locus tag: Cphy_0217
so part of: sequence
location: 265478..266050
location: region:265478-266050:1
so has part: feature:265478-266050:1:exon
subclass of: SO_0000010

position:265478:1
position: 265478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266050:1
position: 266050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:265478-266050:1:exon

CPHY_RS01200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01200
old locus tag: Cphy_0217
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: zinc-ribbon domain-containing protein
translation: MVCKICGRTIQNEEANFCEYCGAPFRPGMDNRVLENEHSSSPNVYGQDITMQQRLGQGSASQNGPWQTNYEQSAYGNSSMKDQVLGRFTNQDSNTNAQGSAVVQEKPMSVGKWLAVMMLGFIPPIGPYAFLILLFYWSFSKSIPLTRKNWARATLIVALVLVIFLFAAIGMTGGEILSDPTAILNSIYGK
SIO_010081: CPHY_RS01200
subclass of: SO_0000673
so part of: CPHY_RS01200
location: 265478..266050
location: region:265478-266050:1
so has part: feature:265478-266050:1:exon

WP_012198247.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:265478-266050:1:exon

CPHY_RS01205
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: yicI
locus tag: CPHY_RS01205
old locus tag: Cphy_0218
so part of: sequence
location: 266504..268846
location: region:266504-268846:1
so has part: feature:266504-268846:1:exon
subclass of: SO_0000010

position:266504:1
position: 266504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268846:1
position: 268846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266504-268846:1:exon

CPHY_RS01205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: yicI
locus tag: CPHY_RS01205
old locus tag: Cphy_0218
EC number: 3.2.1.177
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016279894.1
GO function: GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha-xylosidase
translation: MKFSNGCWLQKKGTECFSPVQVYDYQIKENEVRILTTTHQINHRGDTLGGVNLTIFITAPAPEVLRVKTYHYMGVRKKSPEFELDLSGACTLECEDTEDILIIKNGSLRLEVQKSNAAFAYYRGNEKLTSSGWRDLAYMKTDWQGLAYDDGGEEDTYMREQLTLSVGELVYGLGERFTPFVKNGQSLDIWNEDGGTSTEQSYKNIPFYITNKGYGVFVNHPEKVSFEIGSEMVTKVGFSVPGECLDYFIINGPDIKQVLARYTDLTGKPGLPAPWTFGLWLSTSFTTNYDEETVNSFVDGMLERGIHLGVFHFDCFWMKDFCWSDFTWDSRVFPDPKNMLARLKAKGLKICVWINSYIGQESVLFEEGVKGGYFLKRKNGDVWQWDMWQPGMAVVDFTNPEACKWFGEKLKALLDMGVDCFKTDFGERIPTDVVYYDGSDPMKMHNYYTYLYNKTVYDVLASCKGREEAILFARSATVGGQKFPVHWGGDCWSDYESMEESLRGGLSLTMSGFGYWSHDIGGFESTSTPDVYKRWAAFGLLSTHSRLHGSTSYRVPWAYDEEAVDVVRFFTELKGSLMPYLYRNAVETSESGIPMMRSMVMEYTKDPNCSYLDKQYFLGDSLLVAPIFNENSMAHYYLPKGKWTNYLTGEVKEGGRWYEEEHSYLSIPLYVKQGSIIASGPKGQGAVYEYTKDLELKIYELQEGVEVATTVYQETGEKAVVMSAVLNGGKITINLTSKVPVSIVLKNYVVNSVEGVSFKVDGNDTIILAQESVVAIVAIS
SIO_010081: CPHY_RS01205
subclass of: SO_0000673
so part of: CPHY_RS01205
location: 266504..268846
location: region:266504-268846:1
so has part: feature:266504-268846:1:exon

WP_012198248.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:266504-268846:1:exon

CPHY_RS22275
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS22275
old locus tag: Cphy_0219
so part of: sequence
location: 268918..269046
location: region:268918-269046:1
so has part: feature:268918-269046:1:exon
subclass of: SO_0000010

position:268918:1
position: 268918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269046:1
position: 269046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268918-269046:1:exon

CPHY_RS22275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS22275
old locus tag: Cphy_0219
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDKRVCAEKGAHADRGAREDKGTRAEKGTRADKEIRIDKGNW
SIO_010081: CPHY_RS22275
subclass of: SO_0000673
so part of: CPHY_RS22275
location: 268918..269046
location: region:268918-269046:1
so has part: feature:268918-269046:1:exon

WP_012198249.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:268918-269046:1:exon

CPHY_RS01210
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01210
old locus tag: Cphy_0220
so part of: sequence
location: 269186..271306
location: region:269186-271306:1
so has part: feature:269186-271306:1:exon
subclass of: SO_0000010

position:269186:1
position: 269186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271306:1
position: 271306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269186-271306:1:exon

CPHY_RS01210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01210
old locus tag: Cphy_0220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002602292.1
GO function: GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycoside hydrolase family 3 C-terminal domain-containing protein
translation: MTLEEKIGLIHGNGIFRSGGVERLGIPSLKMSDGPMGVRREFEDNRWFLACKTDDYVSYLPSNSAIAATWNKDLAYTSGQVLGSEARGRGKDVILAPGINIKRSPLCGRNFEYMSEDPKLIEELASFMIQGIQENDVAACVKHFAVNNQETDRLAVDTDLEDRALFEIYLPGFKAAIKNGESYSIMGAYNKFRGAQCCENSYLLGTILREEWEYDGTIISDWGGVHDTKAAANSPLDIEMDVKPNFDEYNMANPLLEAVHRNEISEAEIDKKVRNILRLMLRLKMIGEESEQRESGTYNMISHQQEILKVARESIILLKNEEDRLPLKKNIKKLAVIGQNANILHAAGGGSAEVKALYEISPLLGIRMELGGNTEVTYRPGYYVSYQKVFDIIGYQETSTDVMAERAKRKQVWLELEKEGKEKRKAEEKRLREEAVLLARETEDVILVVGLDHHQDMEGRDRKRYELPYAQEKLIEEVLDANPNTILVVCAGSPVSMQKFSNKAKTIVWSYYNGMQGGKALADVLFGIVNPSGKLPESMPKELNDCPAHKFGEFGTKGSVYYNEGIMVGYRYYDTENITPEFCFGHGLSYTNFTYKNLTVRANKGKGAFLSFSIRNTGKTAGAETIQVYVSDPVCSVKRPIHELKGFTKVFLQPGEEKELMMELKPSAFTYYCTESKKFVLEGGEFIIEVGSSSRDIRLSKMVRIE
SIO_010081: CPHY_RS01210
subclass of: SO_0000673
so part of: CPHY_RS01210
location: 269186..271306
location: region:269186-271306:1
so has part: feature:269186-271306:1:exon

WP_049762446.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:269186-271306:1:exon

CPHY_RS01215
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: gltX
locus tag: CPHY_RS01215
old locus tag: Cphy_0221
so part of: sequence
location: 271681..273153
location: region:271681-273153:1
so has part: feature:271681-273153:1:exon
subclass of: SO_0000010

position:271681:1
position: 271681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273153:1
position: 273153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271681-273153:1:exon

CPHY_RS01215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: gltX
locus tag: CPHY_RS01215
old locus tag: Cphy_0221
EC number: 6.1.1.17
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198251.1
GO component: GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO function: GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
GO process: GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamate--tRNA ligase
translation: MAKVRTRFAPSPTGRMHVGNLRTALYEYLIAKHEGGDFILRIEDTDQERLVEGATEIIYRTIAKTGLIHDEGPDKDKGFGPYVQSERQATGIYLKYAKELVENGEAYYCFCTKERLETLKSAVGEEDGESKEITKYDKHCLHLSKEEVEANLAAGMPYVIRQNMPTEGTTSFTDAIYGTITVENSELDDMILIKSDGFPTYNFANVIDDHFMEITHVVRGNEYLSSTPKYTRLYKAFGWEEPVYIHCPLITNEEHQKLSKRSGHSSFEDLIEQGFVTEAIVNFIALLGWSSTTNEEIFSLEELVREFDYTHINKSPSVFDMNKLRWMNGEYIKRMDSEKYYEYALPQIKKVVTKDYDLKFIADLVKTRIETFLDIAEMIDFFDELPEYDIAMYTHKKMKTDSENSLKVLQDVLPRFEELTCYSVSSIESVLMGYIAENGIKNGQGLWPVRTAVSGKQSTPGGAYEIMSILGKEESLRRIRIAIDKLSSSL
SIO_010081: CPHY_RS01215
subclass of: SO_0000673
so part of: CPHY_RS01215
location: 271681..273153
location: region:271681-273153:1
so has part: feature:271681-273153:1:exon

WP_012198251.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:271681-273153:1:exon

CPHY_RS01220
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01220
old locus tag: Cphy_0222
so part of: sequence
location: 273457..275457
location: region:273457-275457:1
so has part: feature:273457-275457:1:exon
subclass of: SO_0000010

position:273457:1
position: 273457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275457:1
position: 275457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273457-275457:1:exon

CPHY_RS01220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01220
old locus tag: Cphy_0222
EC number: 3.6.4.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015515389.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent helicase
translation: MKTVNEAQERAIKHHKGPMLVLAGPGSGKTLVIIRRTQYLIEQHGISPNNILVITFTKAAAMEMQERFDRLMGQGRFGVNFGTFHAIFFKILRFAYNYSVSNIITEEERYRLLRDIIQSMELEIEDEKEFLEGIGSEISLVKGENMDISHYYSMNCSEETFQEIYKEYDKKLRHQNKIDFDDMLLLCYELLIERPDILSLWQQKYQYILIDEFQDINRIQYEIIKMLAKPKNNLFIVGDDDQSIYRFRGAKPEIMLSFEEEYKGVKKVVLNKNYRSKGNIITGALKVVGNNKKRFPKEIQSIHEPGNEINVKSFSDLPAQNQAILEEIDHYRKMGMRYSQIAVLYRTNTQPGSLVTKLMEYNIPFKMRDSLPNIYEHWIAKDLICYIKLSMGIRERGLFLQVMNRPKRYISREALEQTDVDLNTIREFYMEKPYVVERIDKLVYDLTLIRRTNPYAAINYIRRAVGYDDYLKEYAAFRRIKVEELYDILSELQEESREYKTHEEWLNHIDEYKDGLKEQALKQNQKDVDGVILTTFHASKGLEFDVVILMDANEGITPHKKAVVPEDMEEERRMFYVAMTRAKSFLHIFYVKQRYNKELSPSRFVGELLVSPMELREGMRIHHSIYGEGSIKKMEENKLTIQFDKIFLPKVLDMEFCIRNQMIKVV
SIO_010081: CPHY_RS01220
subclass of: SO_0000673
so part of: CPHY_RS01220
location: 273457..275457
location: region:273457-275457:1
so has part: feature:273457-275457:1:exon

WP_012198252.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:273457-275457:1:exon

CPHY_RS01225
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01225
old locus tag: Cphy_0223
so part of: sequence
location: complement(275696..276031)
location: region:275696-276031:-1
so has part: feature:275696-276031:-1:exon
subclass of: SO_0000010

position:275696:-1
position: 275696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276031:-1
position: 276031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275696-276031:-1:exon

CPHY_RS01225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01225
old locus tag: Cphy_0223
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006779778.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1292 domain-containing protein
translation: MDKHGDDCNCSSDEFFHDQVTLTLEDDTEVVCDIIAVFPCGEKQYIALLPEDAGEEGEVFLYEFIQNGDEIELESIEDDAEFEAVSEAFDEFIDSEEFDEMFGDEEAEDEE
SIO_010081: CPHY_RS01225
subclass of: SO_0000673
so part of: CPHY_RS01225
location: complement(275696..276031)
location: region:275696-276031:-1
so has part: feature:275696-276031:-1:exon

WP_012198253.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:275696-276031:-1:exon

CPHY_RS01230
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01230
old locus tag: Cphy_0224
so part of: sequence
location: 276345..278903
location: region:276345-278903:1
so has part: feature:276345-278903:1:exon
subclass of: SO_0000010

position:276345:1
position: 276345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278903:1
position: 278903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276345-278903:1:exon

CPHY_RS01230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01230
old locus tag: Cphy_0224
EC number: 3.6.4.12
inference: COORDINATES: protein motif:HMM:NF016724.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent DNA helicase
translation: MPDTDLKSIKISVRNLVEFIMKSGDLDNSVGKRDPDAMQEGSRLHRKIQRRMGPEYKPEVALRVTVPVSREDIEFELIIEGRADGIITNIEPTKEDNPILEEKPTLEEKPTLEEKPILEGKPILEGNPILEENPTLGEHHPSEEHPSKQNGAEGNIHVIIDEIKCVYADISQITEMIPVHRAQALCYAYIYAKERVLDTISIQITYCHLETEAIRILSEELKFKELSNWFQNLIQEYCKWAAWQIKWMESRNESIKQIEFPFEYRPGQRDLVTGVYRTIIRDKKLYIEAPTGVGKTISTVFPTVKAMGEGFVSKIFYLTAKTITRTVAEDTYQLLLERGLSMKLVTITAKDKICILDKPNCNPAACERAKGHYDRVNDAVFDLLTSESRISRELIEQYAMKHCVCPFEMCLDVTLWADGIICDYNYAFDPNVYLRRFFENDKKQDYVFLIDEAHNLVDRAREMYSAMLYKQDFLTVKGIVKDKSKTMVKRLEACNEVMLRLKRGCDDIEVLQDVNDLVLPLLRLMSEYEEFFKEYGDFEGREVVSQLFFDLRKFLAIHDILGEDYLIYSDYDERGEFRVKLLCMDPARNLLTCLNKGRSSIFFSATLLPITYYKEQLGGSEEDYAIYAPSPFEVSKRLLMIAKDVSTKYTRRGQDEYERIVSYIEGFVNAKVGNYFVFFPSYQMLQQIAQLSEDRIPNLLLQKTSMGELEKEEFLAAFEENPTNTKVGYCVMGGIFSEGIDLKKDRLIGAVIVGTGLPQVGNERELFRGYYDDRNGSGFDHAYLYPGINKVLQSAGRVIRTVEDKGAILLLDERFLNSQYKNLFPREWEQYDIVNQEKMQELLEDFWSQKNE
SIO_010081: CPHY_RS01230
subclass of: SO_0000673
so part of: CPHY_RS01230
location: 276345..278903
location: region:276345-278903:1
so has part: feature:276345-278903:1:exon

WP_012198254.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:276345-278903:1:exon

CPHY_RS01235
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01235
old locus tag: Cphy_0225
so part of: sequence
location: complement(279075..279992)
location: region:279075-279992:-1
so has part: feature:279075-279992:-1:exon
subclass of: SO_0000010

position:279075:-1
position: 279075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279992:-1
position: 279992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279075-279992:-1:exon

CPHY_RS01235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01235
old locus tag: Cphy_0225
inference: COORDINATES: protein motif:HMM:TIGR00147.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: diacylglycerol kinase family lipid kinase
translation: MYHFIINPHSKTGKAKELWQGLRQRLENESINYKEYFTTGHGHATQIAKEICTIDNERKTIVIVGGDGTANEVINGIDNYEDVLLGYIPMGSSNDLARGLLLPKNPAEALDRVLNPRKIRAVDHGQVTFEDGLPRRFSVSSGIGYDAAICQVAQTTKIKNFLNKIGIGKLTYFLIGVKEIFANKPCDATVIADGITYSVKNLIFMASLIHKCEGGGLLMAPDASDNDRKLSICLVSNIPKLKILFVMPTIFLGKHTKIKGVQMITCSSVSIHTQSPLYVHTDGEVLGEHTDLTLRCTSEQVNIIT
SIO_010081: CPHY_RS01235
subclass of: SO_0000673
so part of: CPHY_RS01235
location: complement(279075..279992)
location: region:279075-279992:-1
so has part: feature:279075-279992:-1:exon

WP_012198255.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:279075-279992:-1:exon

CPHY_RS01240
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01240
old locus tag: Cphy_0226
so part of: sequence
location: 280345..282126
location: region:280345-282126:1
so has part: feature:280345-282126:1:exon
subclass of: SO_0000010

position:280345:1
position: 280345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282126:1
position: 282126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280345-282126:1:exon

CPHY_RS01240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01240
old locus tag: Cphy_0226
inference: COORDINATES: protein motif:HMM:NF017745.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF885 domain-containing protein
translation: MKDLKKRGKQGLVTIALSLSILVTGCANKEKPKDLTFEDYSNQMFQEIVSSSAITYSQFIEDPENFGITEYDHVLATLSKKEYDKSIKQCEEDLAQLLKFDYDTLTTAQKIDYDITKGMLERSIASKDSYYYSEPLSPLDGDHITLSGIVSLYGNRYFQTLVEKEKGNKKEVEKFFEIYEMIGKYFNEVAQYEKEKAKAGLFMNSSRAEVVRKACLSVVNNNASDYKKTFQEEVTKLSFLSDSEKKELIEQSDSLVEKHIVPAYQKLVDTMNDLKDQGGKSKGFYETEAGKIYYENLLKSTCSVNATPEELMKLLEENLAVFVNEKDQILADHPNIENEIVISARQWPDAESITKMLSNKAKEDFPDADLAWGVKEMPTCMNSFAGGLFYPFAIDSTLKEEYIYLGTMNAPGTLSFLQVLAHEGVPGHLFHYNYLNDIGTTDYRKVLAWAGTGLVGYLEGWTTYVEEIGYSYGGLSDVQAREAQLNRLIEITLVTMVDIGVNYYGWENDKISEVISQYAPQYLIMSTYIKSIVEESPGLYSSYAVGYLYTKHIIDAINEKSGGTMSKKEVHEKYLSVGPVTYDILMRELGVAQ
SIO_010081: CPHY_RS01240
subclass of: SO_0000673
so part of: CPHY_RS01240
location: 280345..282126
location: region:280345-282126:1
so has part: feature:280345-282126:1:exon

WP_012198256.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:280345-282126:1:exon

CPHY_RS01245
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01245
old locus tag: Cphy_0227
so part of: sequence
location: complement(282192..283226)
location: region:282192-283226:-1
so has part: feature:282192-283226:-1:exon
subclass of: SO_0000010

position:282192:-1
position: 282192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283226:-1
position: 283226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282192-283226:-1:exon

CPHY_RS01245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01245
old locus tag: Cphy_0227
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016440047.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sugar kinase
translation: MLTVNENREFDALALGEILLRLSAPSNERIVRGDTFEKCAGGAELNVVSGISMMGLRTGIISKVPQNDIGTYVKNHLRFCGVSDDCLIFDESRDARLGIYFYENGAYPRKSSVVYDRRNSSINTISMDDIPESTFSSTKLFHTCGITLALSPQTRDVTEECIKKFKEQGALISFDVNYRANLWDEATAKEYIERILPYVDILFVSEETSRRTFGKTGTIKEIMKSYTEDFNIKIVATTERIVISPKKHTFGSTIYNAVEDKFYEEAPYQNIEVIDRIGSGDAYVSGVLYGLLAYDDCQKALEIGNAASAVKNTIPGDLPSTDLKEIQKIISSHQNIGPQSEMNR
SIO_010081: CPHY_RS01245
subclass of: SO_0000673
so part of: CPHY_RS01245
location: complement(282192..283226)
location: region:282192-283226:-1
so has part: feature:282192-283226:-1:exon

WP_012198257.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:282192-283226:-1:exon

CPHY_RS01250
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01250
old locus tag: Cphy_0228
so part of: sequence
location: 283704..284357
location: region:283704-284357:1
so has part: feature:283704-284357:1:exon
subclass of: SO_0000010

position:283704:1
position: 283704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284357:1
position: 284357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283704-284357:1:exon

CPHY_RS01250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01250
old locus tag: Cphy_0228
inference: COORDINATES: protein motif:HMM:NF025628.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4358 domain-containing protein
translation: MRNKKLMALSLVAVLAFTACGKKETNEPTPTPTVAPTETPAATETPTETPAEPGTDGSGEELGATELTSNETLDKIHEEVKAAYGDNYLPNMPFTVENLDEMFGIKADWYDAAIAEGPMMSAHVDKLIGIHVTEGNLENVQNALNEYQKKIATDIQYPMNLPKVQASVVETAGDYVFFVMLGTIDEMKYTEDSDMIKAFGEQNQIAVDIIKKNIEAK
SIO_010081: CPHY_RS01250
subclass of: SO_0000673
so part of: CPHY_RS01250
location: 283704..284357
location: region:283704-284357:1
so has part: feature:283704-284357:1:exon

WP_012198258.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:283704-284357:1:exon

CPHY_RS01255
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01255
old locus tag: Cphy_0229
so part of: sequence
location: 284607..285221
location: region:284607-285221:1
so has part: feature:284607-285221:1:exon
subclass of: SO_0000010

position:284607:1
position: 284607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285221:1
position: 285221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284607-285221:1:exon

CPHY_RS01255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01255
old locus tag: Cphy_0229
inference: COORDINATES: protein motif:HMM:TIGR02937.1
GO function: GO:0016987 - sigma factor activity [Evidence IEA]
GO process: GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA polymerase sigma factor
translation: MNNADNFSSVGKDISSKEGVQSEQDKIIYQNFLDGDMEAFEELVIKHKDRLIYFIQRLVNNLTIAEDLAQDAFVEVLVHKERYHFQVSFKTYLFTIGRNKAIDYIRKNKRMMLVEDYPESYDEENRMEENIIRKEESKLLYDAMKKLKPDYKAAISLIDLEQMSYAEAAKVLKKSDAQMKVLIYRARKSLAKLMEKEGYSYENK
SIO_010081: CPHY_RS01255
subclass of: SO_0000673
so part of: CPHY_RS01255
location: 284607..285221
location: region:284607-285221:1
so has part: feature:284607-285221:1:exon

WP_012198259.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:284607-285221:1:exon

CPHY_RS01260
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01260
old locus tag: Cphy_0230
so part of: sequence
location: 285208..285843
location: region:285208-285843:1
so has part: feature:285208-285843:1:exon
subclass of: SO_0000010

position:285208:1
position: 285208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285843:1
position: 285843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285208-285843:1:exon

CPHY_RS01260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01260
old locus tag: Cphy_0230
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTNREFIEGIYKKAELLRQQKENSKSESWHLRFLRFNREKKRVPAFAASLATFALFALVIITGSQAGKSPNIDNIENKHLRTVEGQNPIANVSAYGIDEDVSNENINTVLGVITEVVDIQNQKYINIQVSKLLCGEGTPDYITITEGLPLTITTESLKEMNVIVSVKPILGQEEYALIDENSIYFYAKEENNQNYYQAIDGTIVSEDSFK
SIO_010081: CPHY_RS01260
subclass of: SO_0000673
so part of: CPHY_RS01260
location: 285208..285843
location: region:285208-285843:1
so has part: feature:285208-285843:1:exon

WP_012198260.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:285208-285843:1:exon

CPHY_RS01265
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01265
old locus tag: Cphy_0231
so part of: sequence
location: 285891..287309
location: region:285891-287309:1
so has part: feature:285891-287309:1:exon
subclass of: SO_0000010

position:285891:1
position: 285891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287309:1
position: 287309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285891-287309:1:exon

CPHY_RS01265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01265
old locus tag: Cphy_0231
EC number: 2.3.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019278423.1
GO function: GO:0016746 - acyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MBOAT family O-acyltransferase
translation: MVFSSLPFLFRYLPIVLILYFIAPRKYRNAVLFFTSLVFYAWGEPIYVLLMLFSTLVDYTHGMLVHHFKQKGEITKAKIALSSAMIINISLLGFFKYSDFAISNINALTGSDIGLLKLVLPIGISFYTFQTMSYTIDIYRGEAEVQKNIISFGAYVVLFPQLIAGPIVQYKTIAKQLQERREDFDQFSYGVLRFMSGLGKKVLLANNIGILWDRISVTPNGELTVVTAWLGITAFAFQIYFDFSGYSDMAIGLGNMLGFQFLENFNYPYMSKSITEFWRRWHISLGTWFRDYVYIPLGGNRCGLGKQIRNIAIVWFLTGFWHGASWNFIMWGVYFGVILILEKFVLLKFLNKLPSFLSHIYAIVLVWIGWAIFAFDDFSKGINYIKAMFGVNTIGFINDNARYLLMNYAIILIVLILGSTDLPKRVANRLVGEHSEKKTTAVVQGLFIVGVFVISVAYLVDASYNPFLYFRF
SIO_010081: CPHY_RS01265
subclass of: SO_0000673
so part of: CPHY_RS01265
location: 285891..287309
location: region:285891-287309:1
so has part: feature:285891-287309:1:exon

WP_012198261.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:285891-287309:1:exon

CPHY_RS01270
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01270
old locus tag: Cphy_0232
so part of: sequence
location: 287321..288520
location: region:287321-288520:1
so has part: feature:287321-288520:1:exon
subclass of: SO_0000010

position:287321:1
position: 287321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288520:1
position: 288520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287321-288520:1:exon

CPHY_RS01270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01270
old locus tag: Cphy_0232
inference: COORDINATES: protein motif:HMM:NF025644.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DHHW family protein
translation: MSEVNKNLEAIPNPPTVKKGKGKGQRAKYSNVIIFLVLIYVLTIASMVKPVKGYSESENRVLEGRPKFSLESLFNGTFISKYETFVTDQFVSRDAWIGIKTRTELAMLKKDINGVYIGKDGYLIEKVDNSDLEMEQVNRNEKRLYAFINKYKEQLGDEHVFAMIAPTAFEILKDKLPPYASGFDQGAFLDRLDEALANQFIDLRETLTEHKKDYIFYRTDHHWTTLGAYYAYVEWANKIGETPMSQDEFEIKKISNDFLGTIYSKINLKLSSDDMYLYDSGKNYTVEYNMDGVKKNSLYEMSHLDTKDKYSVYLGGNNPVVKIDSDNHNGKKLLIIKDSYAHSFAPFAANHFETTYMVDLRYFNMPMSRFIEENGITDVLVLYNVNTYVKEKSLDNMVR
SIO_010081: CPHY_RS01270
subclass of: SO_0000673
so part of: CPHY_RS01270
location: 287321..288520
location: region:287321-288520:1
so has part: feature:287321-288520:1:exon

WP_012198262.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:287321-288520:1:exon

CPHY_RS01275
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01275
old locus tag: Cphy_0233
so part of: sequence
location: complement(288696..289409)
location: region:288696-289409:-1
so has part: feature:288696-289409:-1:exon
subclass of: SO_0000010

position:288696:-1
position: 288696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289409:-1
position: 289409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288696-289409:-1:exon

CPHY_RS01275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01275
old locus tag: Cphy_0233
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004071724.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lysophospholipid acyltransferase family protein
translation: MKRILLMLLRSFFNLPIWFFQLKRLCNIEKHDRFERYAWLHKNAPVANRRGRVTIDCHGLENLPKEDGYILFPNHQGLFDALAFLETHERPFVTVMKKEVKDIFFLRDVIKLLQAEIIDREDIRQSMTVIKNMTTRVKGGENFVIFAEGTRSKNGNQIGEFKGGSFKSAMNARCPIVPVALIDAFKAFDTNSIKKITVQIHYLKPLYYDDYKGMKSTEIAELVENMIKETIAKFAQE
SIO_010081: CPHY_RS01275
subclass of: SO_0000673
so part of: CPHY_RS01275
location: complement(288696..289409)
location: region:288696-289409:-1
so has part: feature:288696-289409:-1:exon

WP_012198263.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:288696-289409:-1:exon

CPHY_RS01280
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: rpoD
locus tag: CPHY_RS01280
old locus tag: Cphy_0234
so part of: sequence
location: complement(289502..290617)
location: region:289502-290617:-1
so has part: feature:289502-290617:-1:exon
subclass of: SO_0000010

position:289502:-1
position: 289502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290617:-1
position: 290617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289502-290617:-1:exon

CPHY_RS01280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: rpoD
locus tag: CPHY_RS01280
old locus tag: Cphy_0234
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016284218.1
GO function: GO:0016987 - sigma factor activity [Evidence IEA]
GO process: GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA polymerase sigma factor RpoD
translation: MEEQVNTFEARLKELIAFANDNKGVIEVDKVNDFFKELNLNVRQIDKIYEYLEANNIVVLNPTDEDEPNEDALLELEDDSDMIGDTEDLSAMTSTISDDPVKQYLKEIGSYPLLSVAEEIELAKKIEAGDNMAKQILAESNLRLVVSIAKRYVGRGLSFLDLIQEGNLGLIKAVDKFDYNKGYKFSTYATWWIRQAITRSIADQSRTIRIPVHMSEVINKTYRVSRNLLQELGREPSEQELADAMNLPIEKVREILKVSADPISLDTPIGEEDDSHLGDFIKDDTIMGPEDAASYAVLQDQISKLLDTLTEREQRVLILRFGLQDGRSRTLEEVGKEFNVTRERIRQIEAKALRKLRHPSRARMLKGYELN
SIO_010081: CPHY_RS01280
subclass of: SO_0000673
so part of: CPHY_RS01280
location: complement(289502..290617)
location: region:289502-290617:-1
so has part: feature:289502-290617:-1:exon

WP_012198264.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:289502-290617:-1:exon

CPHY_RS01290
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: rpsL
locus tag: CPHY_RS01290
old locus tag: Cphy_0235
so part of: sequence
location: 291402..291824
location: region:291402-291824:1
so has part: feature:291402-291824:1:exon
subclass of: SO_0000010

position:291402:1
position: 291402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291824:1
position: 291824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291402-291824:1:exon

CPHY_RS01290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: rpsL
locus tag: CPHY_RS01290
old locus tag: Cphy_0235
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006863839.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S12
translation: MPTFNQLVRKGRKTMEKNSQAPALQKGFNSLRKKTTDASAPQKRGVCTAVRTATPKKPNSALRKIARVRLSNGIEVTSYIPGEGHNLQEHSVVLIRGGRVKDLPGTRYHIVRGTLDTAGVAKRRQARSKYGAKRPKEAKK
SIO_010081: CPHY_RS01290
subclass of: SO_0000673
so part of: CPHY_RS01290
location: 291402..291824
location: region:291402-291824:1
so has part: feature:291402-291824:1:exon

WP_012198265.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:291402-291824:1:exon

CPHY_RS01295
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: rpsG
locus tag: CPHY_RS01295
old locus tag: Cphy_0236
so part of: sequence
location: 292063..292533
location: region:292063-292533:1
so has part: feature:292063-292533:1:exon
subclass of: SO_0000010

position:292063:1
position: 292063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292533:1
position: 292533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292063-292533:1:exon

CPHY_RS01295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: rpsG
locus tag: CPHY_RS01295
old locus tag: Cphy_0236
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013274355.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S7
translation: MPRKGHIQKRDVLADPIYNNKTVTKLINNIMLDGKKGTAQKIVYGAFEKVAEKSGKDATEVFEEAMNNVMPVLEVKARRIGGATYQVPIEVRPDRRQALGLRWLTMFSRKRGEKTMVDRLAGEILDAAANTGSAVKRKEDMHKMADANKAFAHYRW
SIO_010081: CPHY_RS01295
subclass of: SO_0000673
so part of: CPHY_RS01295
location: 292063..292533
location: region:292063-292533:1
so has part: feature:292063-292533:1:exon

WP_012198266.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:292063-292533:1:exon

CPHY_RS01300
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: fusA
locus tag: CPHY_RS01300
old locus tag: Cphy_0237
so part of: sequence
location: 292844..294961
location: region:292844-294961:1
so has part: feature:292844-294961:1:exon
subclass of: SO_0000010

position:292844:1
position: 292844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294961:1
position: 294961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292844-294961:1:exon

CPHY_RS01300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: fusA
locus tag: CPHY_RS01300
old locus tag: Cphy_0237
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007866451.1
GO function: GO:0003746 - translation elongation factor activity [Evidence IEA]
GO process: GO:0006414 - translational elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: elongation factor G
translation: MAGREYPLERTRNIGIMAHIDAGKTTLSERILYYTGVNYKIGDTHEGTATMDWMEQEQERGITITSAATTCHWTLELEHKKAPGALEHRINLIDTPGHVDFTVEVERSLRVLDSAVGVFCAKGGVEPQSETVWRQADKYNVPRMAFVNKMDISGANFFNVVDMIKSRLGKNAVPIQLPIGKEDTFKGVIDLFEMKAYYYLDDKGEQIEIKEIPDDMKDQAEEYRAAMIESICETDDDLIEAFLEGNEPSNEELKKALRNATISVQIIPVLCGSAYRNKGVQKLLDAVIEFMPAPTDIEDIKGFDEEGNEIHRISSDEEPFAALAFKIMADPFVGKLAFFRVYSGTLNAGSYVLNATKNKKERVGRILQMHANKREDLDKVYSGDIAAAVGFKFTSTGDTICDEKHPVVLEAMEFPEPVIDVAIEPKTKAGQDKMGEALAKLAEEDPTFRVRTNEETGQTIIAGMGELHLEIIVDRLLREFKVEANVGAPQVAYKEGFTKEVDIDSKYAKQSGGRGQYGHCKVKFSPMDVNGEKVFEFVSTVVGGAIPKEYIPAVQAGIEDAMKCGVLGGYPVLGVRANCYDGSYHEVDSNEMAFKIAGSMAFKDAMHKAGPILLEPIMRVEVTVPDDYMGDVIGDISSRRGRIEGTEDNNGSKIIRGFVPLSEMFGYSTTLRSKTQGRGAYSMFFSTYEPVPKNVQEKVLSNKTK
SIO_010081: CPHY_RS01300
subclass of: SO_0000673
so part of: CPHY_RS01300
location: 292844..294961
location: region:292844-294961:1
so has part: feature:292844-294961:1:exon

WP_012198267.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:292844-294961:1:exon

CPHY_RS01305
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: tuf
locus tag: CPHY_RS01305
old locus tag: Cphy_0238
so part of: sequence
location: 295200..296393
location: region:295200-296393:1
so has part: feature:295200-296393:1:exon
subclass of: SO_0000010

position:295200:1
position: 295200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296393:1
position: 296393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295200-296393:1:exon

CPHY_RS01305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: tuf
locus tag: CPHY_RS01305
old locus tag: Cphy_0238
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198268.1
GO function: GO:0003746 - translation elongation factor activity [Evidence IEA]
GO process: GO:0006414 - translational elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: elongation factor Tu
translation: MGKAKFERNKPHCNIGTIGHVDHGKTTLTAAITKTLHDRLGTGEAVAFDKIDKAPEERERGITISTSHVEYESKARHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGVMAQTKEHILLSRQVGVPYIVVFMNKCDMVDDPELLELVEMEIRELLSEYEFPGDDTPIIQGSALRALEDPNSQWGDKILELFDAVDTWIPDPQRATDKPFLMPIEDVFSITGRGTVATGRVERGVLHVSEEVEIVGVKEETRKVVVTGIEMFRKLLDEAQAGDNIGALLRGVQRTDIERGQVLCKPGTIKCYKKFTAQVYVLTKDEGGRHTPFFNNYRPQFYFRTTDVTGVCNLPEGVEMCMPGDNIEMNIELIHPIAMEQGLGFAIREGGRTVGSGKVATIIG
SIO_010081: CPHY_RS01305
subclass of: SO_0000673
so part of: CPHY_RS01305
location: 295200..296393
location: region:295200-296393:1
so has part: feature:295200-296393:1:exon

WP_012198268.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:295200-296393:1:exon

CPHY_RS01310
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01310
old locus tag: Cphy_0239
so part of: sequence
location: 296631..297458
location: region:296631-297458:1
so has part: feature:296631-297458:1:exon
subclass of: SO_0000010

position:296631:1
position: 296631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297458:1
position: 297458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296631-297458:1:exon

CPHY_RS01310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01310
old locus tag: Cphy_0239
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNMQNKTVFHRKFGKGIIVDLNQNKLSVQFDAGKKIFVYPDAFRQFLVLMEKDGKSYVDGMLKELDRKEEISNRIARKMERHNQLIDKLKLHPSSQIVIRFVENDKATFLEDKIINTGLIQTGKTKGSPVRPSRLHQNSACILTERNEEEDESSRTIFGIAMVEEDFLGTDCKDGKVTLHSQYVLLLPDHLQKLKFWNYYTDERYPEKLVWKSGEFRYCSNLISAQILKDIMSLPLENDAAALAEEFYHYFCEINQIEESTLPLPLGKLLEEGIK
SIO_010081: CPHY_RS01310
subclass of: SO_0000673
so part of: CPHY_RS01310
location: 296631..297458
location: region:296631-297458:1
so has part: feature:296631-297458:1:exon

WP_012198269.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:296631-297458:1:exon

CPHY_RS01315
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01315
old locus tag: Cphy_0240
so part of: sequence
location: 297866..299836
location: region:297866-299836:1
so has part: feature:297866-299836:1:exon
subclass of: SO_0000010

position:297866:1
position: 297866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299836:1
position: 299836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297866-299836:1:exon

CPHY_RS01315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01315
old locus tag: Cphy_0240
EC number: 3.1.4.52
inference: COORDINATES: protein motif:HMM:NF012772.2
GO function: GO:0071111 - cyclic-guanylate-specific phosphodiesterase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GGDEF domain-containing phosphodiesterase
translation: MILGGLSSRRGYYDEHNTRNKRKIRFFVIMGIGILSIVAFLLSLKGMLHSEAEKKLLEYTGLSADYIKKSEAGKQFMEEKWGSGIFTIIPGAKNPTYFQGNAHSYVVTIKGEAIGAFSESGKDALSIYGNNVIDSIETWEDTKVYQEIIDKKGLVILTKLANGEKYYIAFTSPSWLENGYIISIVSYQEIIQEIQSVLKMAIVIVLFSLLAIILAFFYSILHRNRIKKRRMDMGAVDKITGLPNPLLHKKKVKEKLTKGNESYAYVTFCIDNFELIYELSGKQYCEKLLKQIASKIQIMLVDGELFTRYQNDEFGMLLEYHGELNLRKRLVEMFKYAGDLPQEDNNFCSITFQCGVCEMKKNMDVKDLIQYARQVRNNEVNGYTPNIEFYNKKEEKGEQPKIEEITNALSHNEFLVYLQPILQLDTKRIAGAEALVRWNHKMDGILPPNVFLPMLEEDGSIVKLDMYVLEEVCEYLRDWMDKGKRAVPISVNLSGKHLERPEFITELVEIVDYYQIPHELLEFEFSEVNLYGAMDMMKNAIQKLRELGFLIAIDQFGAGFSSLQLLKELPIHVLKIDKKLIMNLEDSEFSNQEKTIVMHILSFAKARNLTVIAEGVETKEQQDLLIDQQCDMMQGFYYQKPMPSEEFERLLDASGA
SIO_010081: CPHY_RS01315
subclass of: SO_0000673
so part of: CPHY_RS01315
location: 297866..299836
location: region:297866-299836:1
so has part: feature:297866-299836:1:exon

WP_012198270.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:297866-299836:1:exon

CPHY_RS01320
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01320
old locus tag: Cphy_0241
so part of: sequence
location: complement(299816..300406)
location: region:299816-300406:-1
so has part: feature:299816-300406:-1:exon
subclass of: SO_0000010

position:299816:-1
position: 299816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300406:-1
position: 300406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299816-300406:-1:exon

CPHY_RS01320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01320
old locus tag: Cphy_0241
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNTTKMERKKITHEIHLVSNYRALLIAKHIGTLLLILYFAPAAITGFDESPALYILLLHNILPAVFFFLFTNKNNSNTKSPRILKPSAYDEVKEEPKKKHTLSFSFAKEMEADTPLLPQLKKKYQYSRVKYQSNSISFLLTCFFLYLWQQQDLTQTNFYLYRYMPVAILAVIVLTRFICIIFYECYIHYSLRSGGI
SIO_010081: CPHY_RS01320
subclass of: SO_0000673
so part of: CPHY_RS01320
location: complement(299816..300406)
location: region:299816-300406:-1
so has part: feature:299816-300406:-1:exon

WP_041703052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:299816-300406:-1:exon

CPHY_RS01325
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: mreB
locus tag: CPHY_RS01325
old locus tag: Cphy_0242
so part of: sequence
location: 300818..301807
location: region:300818-301807:1
so has part: feature:300818-301807:1:exon
subclass of: SO_0000010

position:300818:1
position: 300818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301807:1
position: 301807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300818-301807:1:exon

CPHY_RS01325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: mreB
locus tag: CPHY_RS01325
old locus tag: Cphy_0242
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007888000.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rod shape-determining protein MreB
translation: MLGCDIGIDLGTASVLVYIKGKGVVLKEPSVVAFDRDTNKIKAIGEEARLMLGRTPGNIVAVRPLRQGVISDYTVTEKMLKYFIQKAVGKQRFRKPIISVCVPSGVTEVEKKAVEDATYQAGARDVAIIEEPIAAAIGAGIDISRPCGNMIVDIGGGTTDIAVISLGGTVVSTSIKIAGDDFDEAIVRYMRKKHNLLIGERTAEDIKIKIGSAYRRPEVVAMDVRGRNLVTGLPKTISVTSEETEEALKETTSQIVEAVHSVLEKTPPELAADIADRGIVLTGGGCLLYGLEELIEEKTGITTMTAEDPMTAVAIGTGKYVEFLSGKKD
SIO_010081: CPHY_RS01325
subclass of: SO_0000673
so part of: CPHY_RS01325
location: 300818..301807
location: region:300818-301807:1
so has part: feature:300818-301807:1:exon

WP_012198272.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:300818-301807:1:exon

CPHY_RS01330
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01330
old locus tag: Cphy_0243
so part of: sequence
location: 301931..302704
location: region:301931-302704:1
so has part: feature:301931-302704:1:exon
subclass of: SO_0000010

position:301931:1
position: 301931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302704:1
position: 302704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:301931-302704:1:exon

CPHY_RS01330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01330
old locus tag: Cphy_0243
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005601324.1
GO process: GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar hook-basal body protein
translation: MVRGLYTGWTGMENEQKRLDIISNNLANSATVGYKKEGVTNQSFDDVLTLKIRDESENFTDKRIGKMTLGVKLGEVYTDYTQGSLRETGNTFDFAIEGSGFFKMEVLDKDGNSKERYTRAGQFLMDKEGYVVDVNGNHLMSEGGYLQVPTDASQIVIDLQGNVFADGAQVDKLVVTDFENYDYLKKFGESMYEAVDGARVKDTAAGIRQGYTEQSNVNVVSEMVNMIAITRAYEANQKVLQSIDGTLELAANSIGKI
SIO_010081: CPHY_RS01330
subclass of: SO_0000673
so part of: CPHY_RS01330
location: 301931..302704
location: region:301931-302704:1
so has part: feature:301931-302704:1:exon

WP_012198273.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:301931-302704:1:exon

CPHY_RS01335
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01335
old locus tag: Cphy_0244
so part of: sequence
location: 302817..303632
location: region:302817-303632:1
so has part: feature:302817-303632:1:exon
subclass of: SO_0000010

position:302817:1
position: 302817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303632:1
position: 303632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302817-303632:1:exon

CPHY_RS01335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01335
old locus tag: Cphy_0244
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006856702.1
GO process: GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar hook-basal body protein
translation: MMRALWTGASGMISQQTSLDTISNNLSNINTAGYKKENAQFSSLLYSKIQSKVTDSEGKVKPVIGQVGSGVRVTGIVSSFTQGTLQESNNDWDLAISGNGLFSVRDSDGNTAYTRNGSFHIAIGAEGVTLASADGYPVLNTKGQPVVFNNNWDISKVTMDEYGNLMYPDANNIAQRTGIQIGLTQFVNPAGLEKAGGSLFYETESSGAPLKEVENNNLKQSKIHTGYLEASNVQTADEIVNLIVTQRAYEMNSKVITAADEMLQQANNLRR
SIO_010081: CPHY_RS01335
subclass of: SO_0000673
so part of: CPHY_RS01335
location: 302817..303632
location: region:302817-303632:1
so has part: feature:302817-303632:1:exon

WP_012198274.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:302817-303632:1:exon

CPHY_RS01340
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01340
old locus tag: Cphy_0245
so part of: sequence
location: 303737..304081
location: region:303737-304081:1
so has part: feature:303737-304081:1:exon
subclass of: SO_0000010

position:303737:1
position: 303737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:304081:1
position: 304081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:303737-304081:1:exon

CPHY_RS01340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01340
old locus tag: Cphy_0245
inference: COORDINATES: protein motif:HMM:NF021638.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rod-binding protein
translation: MSISVGSDAMFQTLTQTAQSTSKTSKLENSLVKDVKTASDEELMESCKSFENYLVEQVMKQVKNTIAKSDDDENEYMSYFGDMLYQSYAKDITESGQLGIAKQLYEAMKRDQNT
SIO_010081: CPHY_RS01340
subclass of: SO_0000673
so part of: CPHY_RS01340
location: 303737..304081
location: region:303737-304081:1
so has part: feature:303737-304081:1:exon

WP_012198275.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:303737-304081:1:exon

CPHY_RS01345
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01345
old locus tag: Cphy_0246
so part of: sequence
location: 304326..306554
location: region:304326-306554:1
so has part: feature:304326-306554:1:exon
subclass of: SO_0000010

position:304326:1
position: 304326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306554:1
position: 306554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304326-306554:1:exon

CPHY_RS01345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01345
old locus tag: Cphy_0246
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007887994.1
GO function: GO:0004386 - helicase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent RecD-like DNA helicase
translation: MAEELKGYVERIVYRNAENGYTVLSLSAEEDEVTCVGTFSFVNEGEYLSLTGSYTAHPLYGEQFQVSSYEMKEPEDLLSIERYLGSGAIKGVGTALAARIVRKFKEKTFVIIEEEPERLSEVKGISDKLAREIYRQFSEKREMRSAMLFLQQYGISLNLAVKIYKQYGERMYEVIKENPYRLAEDISGVGFKIADEIASRIGIRTDSDYRVKAGILYNLLLASGNGHVYLPMHSLVGKTCEMLMVEADTVKRHITSLALEKKLVVKESGEEQHVYSTSFYYMELNVANMLSDLSISYDISPAQVETRLAKIEQETNLELDEMQRYAVMEAVRSGLLIITGGPGTGKTTTINTILRFFEAEGMDMLLAAPTGRAAKRMKETTGYEASTIHRLLELTKGMDDKDGRMSFERNELNPLEADVIIIDEMSMVDISLMHSLLKAITVGTRIILVGDVNQLPSVGPGNVLRDMIESKAFPVVMLKKIFRQASESDIIVNAHKINSGEHITLDNKSKDFFLLKRDDVNVIISVIISLVRDKMPKYVNASVYDIQVLTPMRKGELGVERLNQVLQQYLNPSSQEKKEKEHFGGIFREGDKVMQVKNNYQIAWETKSRYGITIDSGTGVFNGDTGVIKEINLFAEELTVEFDEGRLVTYPFSQLEELELAYAVTIHKSQGSEYPAVVLPIYSGPRMLFNRNLLYTAVTRAKQCVTIVGSDNMVQSMIDNESELKRYSGLQSRIMERKQILS
SIO_010081: CPHY_RS01345
subclass of: SO_0000673
so part of: CPHY_RS01345
location: 304326..306554
location: region:304326-306554:1
so has part: feature:304326-306554:1:exon

WP_012198276.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:304326-306554:1:exon

CPHY_RS01350
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01350
old locus tag: Cphy_0247
so part of: sequence
location: 306745..307665
location: region:306745-307665:1
so has part: feature:306745-307665:1:exon
subclass of: SO_0000010

position:306745:1
position: 306745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307665:1
position: 307665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:306745-307665:1:exon

CPHY_RS01350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01350
old locus tag: Cphy_0247
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008720264.1
GO function: GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
GO process: GO:0009058 - biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sugar phosphate nucleotidyltransferase
translation: MNKTTLVIMAAGIGSRYGGGIKQLEKVGPSGEIIMDYSIYDAIEAGFSKVVFIIRHDLEKDFKEIIGSRIEKEIEVEYVYQELDKLPAGFSKPEDRTKPWGTGQAVLCCKGVVNEPFAVINADDYYGKEAFVKVQNFLRNVDTYNKENEYCMAGFVLGNTLSDNGIVTRGVCNVDESGYLSHVEETFGIEKQGDVAVGKDGNGNPVTITLDSSVSMNMWGFIPNFLQELETGFIDFLQGLDKNNTKAEYLLPNVVGKMVSEDRAKVKVLRTNDKWFGVTYKEDKQLVVDSILELIAQGKYPNKLFN
SIO_010081: CPHY_RS01350
subclass of: SO_0000673
so part of: CPHY_RS01350
location: 306745..307665
location: region:306745-307665:1
so has part: feature:306745-307665:1:exon

WP_012198277.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:306745-307665:1:exon

CPHY_RS01355
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01355
old locus tag: Cphy_0248
so part of: sequence
location: 307697..308425
location: region:307697-308425:1
so has part: feature:307697-308425:1:exon
subclass of: SO_0000010

position:307697:1
position: 307697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308425:1
position: 308425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307697-308425:1:exon

CPHY_RS01355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01355
old locus tag: Cphy_0248
inference: COORDINATES: protein motif:HMM:NF012383.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ComF family protein
translation: MVWREILDAVYPKRCPICNEILVPKDRKICSICSEELPVLMEPRCKKCSKPVLAEEQEYCFDCVKKQHHYTRGFACFLYNEKLKKSLSEFKYHAKKEYAEFYVDYMVSNLGDWIYKTKAEVLIPIPLHKNKYKQRGFNQAQLLAEGLSKALSIPVDTKLLVRTMDTKPQKKLDNKERMKNLEKAFSVSTNVKKSEELFPYKRVILVDDIYTTGSTIEACTNVLQKAGCLEVFFVTVCIGNGF
SIO_010081: CPHY_RS01355
subclass of: SO_0000673
so part of: CPHY_RS01355
location: 307697..308425
location: region:307697-308425:1
so has part: feature:307697-308425:1:exon

WP_041703054.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:307697-308425:1:exon

CPHY_RS01360
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01360
old locus tag: Cphy_0249
so part of: sequence
location: 308496..308897
location: region:308496-308897:1
so has part: feature:308496-308897:1:exon
subclass of: SO_0000010

position:308496:1
position: 308496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308897:1
position: 308897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308496-308897:1:exon

CPHY_RS01360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01360
old locus tag: Cphy_0249
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016286896.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar protein
translation: MDVRNCRSCGKLFNYLSGVQFCPACMRELDKKFEVVKNYIYDNPKANIQEVAEVNEVTVQQLRQWVREERLAFSEDSLVGLECENCGTMIRTGRFCNLCKDKLVNTLGSAYKTDDPKGSKDYRDHAKMRFLDN
SIO_010081: CPHY_RS01360
subclass of: SO_0000673
so part of: CPHY_RS01360
location: 308496..308897
location: region:308496-308897:1
so has part: feature:308496-308897:1:exon

WP_012198279.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:308496-308897:1:exon

CPHY_RS01365
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01365
old locus tag: Cphy_0250
so part of: sequence
location: complement(309186..310025)
location: region:309186-310025:-1
so has part: feature:309186-310025:-1:exon
subclass of: SO_0000010

position:309186:-1
position: 309186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310025:-1
position: 310025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309186-310025:-1:exon

CPHY_RS01365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01365
old locus tag: Cphy_0250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006782127.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S1-like domain-containing RNA-binding protein
translation: MIQLGKIQTLTVAKTTDFGVYLADNDNSRKEDTILLPKNQVAAGTKIGDQLSVFVYKDSEDRPIATQTTPKLTLKEIAVLKVKEVTTIGAFLDWGIAKDLFLPFKEQTHPVIADEEVLVSLYIDKSKRLCATMKIYDMLQTDSPYGKDDKVTGIVYEIIPAFGAFVAVDNKYSALIPNKELHTKLNPGETVTARVTMVQADGKLDLSLREKTYLQLDSDAEIIYEKLTAAGGFLPFHDKSEPDAIKKEFNLSKNAFKRAIGRLMKDNKIKILEDGIQIV
SIO_010081: CPHY_RS01365
subclass of: SO_0000673
so part of: CPHY_RS01365
location: complement(309186..310025)
location: region:309186-310025:-1
so has part: feature:309186-310025:-1:exon

WP_012198280.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:309186-310025:-1:exon

CPHY_RS01370
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01370
old locus tag: Cphy_0251
so part of: sequence
location: complement(310038..310751)
location: region:310038-310751:-1
so has part: feature:310038-310751:-1:exon
subclass of: SO_0000010

position:310038:-1
position: 310038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310751:-1
position: 310751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310038-310751:-1:exon

CPHY_RS01370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01370
old locus tag: Cphy_0251
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198281.1
GO function: GO:0016790 - thiolester hydrolase activity [Evidence IEA]
GO process: GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioesterase
translation: MYSFDSRVRYSEVDHNKVMTASTIINYFQDCSNFQSDSLGVGIEELTKRSRVWIMSSWQLVINRYPTIGEQITIGTWPYKYNGIYGYRNFILYDEKKEVAAVANSIWVLMDTNLNRPVKITDEDYQAYRNEPAYPMEYADRKIRVPKELTSLTPFTVMPSFIDVLNHVNNAQYIRMATDYVDENFQITQMRADYRKSALLGDIIYPKISKTNDCITIVLSDKEGQPYVTVAFYGTTV
SIO_010081: CPHY_RS01370
subclass of: SO_0000673
so part of: CPHY_RS01370
location: complement(310038..310751)
location: region:310038-310751:-1
so has part: feature:310038-310751:-1:exon

WP_012198281.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:310038-310751:-1:exon

CPHY_RS01375
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01375
old locus tag: Cphy_0252
so part of: sequence
location: 311051..312250
location: region:311051-312250:1
so has part: feature:311051-312250:1:exon
subclass of: SO_0000010

position:311051:1
position: 311051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312250:1
position: 312250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311051-312250:1:exon

CPHY_RS01375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01375
old locus tag: Cphy_0252
EC number: 3.4.-.-
inference: COORDINATES: protein motif:HMM:NF014566.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO process: GO:0071586 - CAAX-box protein processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CPBP family intramembrane metalloprotease
translation: MNYVRKINIVFLFTITTIFISNFIPFRDFVSNEAFLLLISQAIIAGPSIVFLIVESRRQKRFSDGLEINYYSMGYGTGEDKKSIREQLCFHKVSLSNVIWLILFTICITPAINFVNAISRMFSVAAINDTMLNITQKNTYLFALFCVAFVPCVMEEIVYRGLFYQGYRRVNPLGAAFLSAFLFGILHGNLNQFCYAFVMGIVFAFVIEATDSILSTMIIHFIMNGWSITLVYAIPRLIEYLRNMANDAIARGDQGLADSITKLIGTDQVDFKQVLQESGNAVLSDTNFIDILRTYGLTALLGGVLAFLIYRKIAKNTGRYEYIKSLFSKNKEYRLEGNHSIPGDEYKGEGNHYISSDEYKGEGKVKARALFTLPLLIAIAICVFFLVINELTLQGIISM
SIO_010081: CPHY_RS01375
subclass of: SO_0000673
so part of: CPHY_RS01375
location: 311051..312250
location: region:311051-312250:1
so has part: feature:311051-312250:1:exon

WP_012198282.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:311051-312250:1:exon

CPHY_RS21125
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS21125
old locus tag: Cphy_0253
so part of: sequence
location: complement(312240..312416)
location: region:312240-312416:-1
so has part: feature:312240-312416:-1:exon
subclass of: SO_0000010

position:312240:-1
position: 312240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312416:-1
position: 312416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312240-312416:-1:exon

CPHY_RS21125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS21125
old locus tag: Cphy_0253
inference: COORDINATES: protein motif:HMM:NF025436.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YjfB family protein
translation: MDIAALSMANSQANLMTQVNTAVLAMNLSSIKEMGENITKLMEQSVTPNLGQTIDVTC
SIO_010081: CPHY_RS21125
subclass of: SO_0000673
so part of: CPHY_RS21125
location: complement(312240..312416)
location: region:312240-312416:-1
so has part: feature:312240-312416:-1:exon

WP_012198283.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:312240-312416:-1:exon

CPHY_RS01380
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: trxB
locus tag: CPHY_RS01380
old locus tag: Cphy_0254
so part of: sequence
location: 312520..313446
location: region:312520-313446:1
so has part: feature:312520-313446:1:exon
subclass of: SO_0000010

position:312520:1
position: 312520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313446:1
position: 313446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312520-313446:1:exon

CPHY_RS01380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: trxB
locus tag: CPHY_RS01380
old locus tag: Cphy_0254
EC number: 1.8.1.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003502811.1
GO function: GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioredoxin-disulfide reductase
translation: MNKIIHDLAIIGSGPAGLTASIYASRAELNTIVIEKEPMSGGQIINTYEVDNYPGIPGIGGFDLAVKFREHSDKLGATHVYGEVKAFEVEDGIKKIVLDNGEEFYAKSLIIATGAASRKLDVKGEAELQGMGVSYCATCDGAFFRGKTVAVVGGGDVAVEDAIFLARICKEVHVIHRRDEFRAAKTFITKLLSLENVTVHWNSVVDEIVGTDAVNAVKVRNVATEETSELNVDGVFIAVGNVPNSEVYTPAVAVDRGGYIIADESCETNVPGIFAAGDIRTKELRQVITAASDGAVAVTGVERYLNHL
SIO_010081: CPHY_RS01380
subclass of: SO_0000673
so part of: CPHY_RS01380
location: 312520..313446
location: region:312520-313446:1
so has part: feature:312520-313446:1:exon

WP_012198284.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:312520-313446:1:exon

CPHY_RS01385
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: raiA
locus tag: CPHY_RS01385
old locus tag: Cphy_0255
so part of: sequence
location: 314508..315044
location: region:314508-315044:1
so has part: feature:314508-315044:1:exon
subclass of: SO_0000010

position:314508:1
position: 314508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315044:1
position: 315044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314508-315044:1:exon

CPHY_RS01385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: raiA
locus tag: CPHY_RS01385
old locus tag: Cphy_0255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008706266.1
GO component: GO:0022626 - cytosolic ribosome [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0045182 - translation regulator activity [Evidence IEA]
GO process: GO:0009386 - translational attenuation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome-associated translation inhibitor RaiA
translation: MRYIISGKNIDVTEGLKSAIYEKIGKLEKYFNPEAEIHVTLSVEKDRQKIEVTIPMKGNIVRAEQVSNDMYASIDLVEEVIERQLKKYKSKLKDMNQSAANFNPSFFEDVLNEDSDEEDINITRVKRFAMKPMDAEEACVQMELLGHNFYVFRNAETDEVNVVYKRKGNSYGLIEPEF
SIO_010081: CPHY_RS01385
subclass of: SO_0000673
so part of: CPHY_RS01385
location: 314508..315044
location: region:314508-315044:1
so has part: feature:314508-315044:1:exon

WP_012198285.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:314508-315044:1:exon

CPHY_RS01390
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: secA
locus tag: CPHY_RS01390
old locus tag: Cphy_0256
so part of: sequence
location: 315431..318007
location: region:315431-318007:1
so has part: feature:315431-318007:1:exon
subclass of: SO_0000010

position:315431:1
position: 315431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318007:1
position: 318007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315431-318007:1:exon

CPHY_RS01390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: secA
locus tag: CPHY_RS01390
old locus tag: Cphy_0256
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198286.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0017038 - protein import [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: preprotein translocase subunit SecA
translation: MGLIKKIFGTHSEREIKLIRPTADKIEALEPDMMKLSDDELRGKTIEFKNRLKNGETLDDILVEAYAVVREAAKRTLGNRAYYVQLLGGIILHQGRISEMRTGEGKTLTSTFPAYLNALEGEGVHIVTVNDYLAKRDAEWMGEVHRFLGLSVGCILNDMDNDERRKAYNCDITYATNNELGFDYLRDNMVIYKEQLVMRDLHFAIIDEVDSVLIDEARTPLIISGQSGKSTRLYEACDILARQLTKGTAKELSKMDIIMKEDDQETGDFVVNEKEKAVNLTAEGVEKVERFFKIENLADPENLEIQHNIILALRAHYLMAIDKDYVVKDDEVLIVDDFTGRIMPGRRYSDGLHQAIEAKEHVKVKRESKTLATITFQNFFNKYTKKCGMTGTALTEENEFREIYGMDVVEVPTNRPVARIDKDDAVYRTKREKLNAVINAIVEAHKAGQPVLVGTITIEASEEISELLKKKNIPHKVLNAKFHELEAEIIADAGQKGAVTIATNMAGRGTDIKLGEGVTELGGLKIIGTERHESRRIDNQLRGRSGRQGDPGESCFYICLEDDLMRLFGSERLNTIFKSLGLPEGEQIEHKMLSGAIEKAQKKIEDNNFGIRKNLLEYDKVNNEQREIIYAERRKVLNGDSMRDVIFKMITDNVETCVNTSISDDQLPEEWDLAELNQMLLPIIPMEPVELKDNELRHMKRNELIHMLKEKAVKLYEEKEAEFPEKEHLREVERVVLLRVIDRKWMDHIDDMDQLRQGIGLQAYGQRDPKTEYKFSGFEMFDTMINAITEDTVKALMHVRIEQKVEREEVAKVTGTNRDESVAKAPVKRATKKVQPNDPCPCGSGKKYKHCCGGVGRI
SIO_010081: CPHY_RS01390
subclass of: SO_0000673
so part of: CPHY_RS01390
location: 315431..318007
location: region:315431-318007:1
so has part: feature:315431-318007:1:exon

WP_012198286.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:315431-318007:1:exon

CPHY_RS01395
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: prfB
locus tag: CPHY_RS01395
old locus tag: Cphy_0257
so part of: sequence
location: 318157..319279
location: region:318157-319279:1
so has part: feature:318157-319279:1:exon
subclass of: SO_0000010

position:318157:1
position: 318157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319279:1
position: 319279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318157-319279:1:exon

CPHY_RS01395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: prfB
locus tag: CPHY_RS01395
old locus tag: Cphy_0257
inference: COORDINATES: similar to AA sequence:RefSeq:WP_118500057.1
ribosomal slippage: true
GO function: GO:0003747 - translation release factor activity [Evidence IEA]
GO process: GO:0006415 - translational termination [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide chain release factor 2
translation: MVELDQFKYTLSQYDKPLIEVGDSLDLANKRLRIEEIEGIMEEPNFWDSQEKSQAYMKELKNLKDIVSEYNGLKQQYDDILTLLEMGYEEEDPDLIPEIEQELEQFIDALEELRLNTLLSDEYDKDNAILTLHAGAGGTESCDWASMLYRMYQRWADKKGYTTELLDFLDGEEAGYKSVTLQINGLNAYGHLKSERGVHRLVRISPFNAAGKRQTSFVSCDVMPDIEEDIDIEINDDDLRIDTYRSSGAGGQHVNKTSSAIRITHIPTGTVVQCQNERSQFQNKDKAMQMLKAKLYLKKKEENAAKESGIRGEIRDINFGNQIRSYVLQPYTMVKDHRTNTDVSNALGVLDGNIDPFINAYLKWIHSSSDEES
SIO_010081: CPHY_RS01395
subclass of: SO_0000673
so part of: CPHY_RS01395
location: join(318157..318231,318233..319279)
location: region:318157-319279:1
so has part: feature:318157-318231:1:exon
so has part: feature:318233-319279:1:exon

WP_157668636.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:318157-318231:1:exon

position:318231:1
position: 318231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:318233-319279:1:exon

position:318233:1
position: 318233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CPHY_RS01400
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01400
old locus tag: Cphy_0258
so part of: sequence
location: 319531..319989
location: region:319531-319989:1
so has part: feature:319531-319989:1:exon
subclass of: SO_0000010

position:319531:1
position: 319531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319989:1
position: 319989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:319531-319989:1:exon

CPHY_RS01400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01400
old locus tag: Cphy_0258
inference: COORDINATES: protein motif:HMM:NF013731.2
GO process: GO:0006935 - chemotaxis [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chemotaxis protein CheW
translation: MEATKQVVFKLGGEEYGFDILIVNAIETYHGVVPVPNAPDYILGILNLRGEVIPVYSLRVKFGLPEVESTTSQLIVTKTNGMTVGFKVDAVDGIVEFSAKDLNEVPIIIKSKKTKYAKLVANKNGKMIVLLDHDGILDDEEHESITRLLEKQ
SIO_010081: CPHY_RS01400
subclass of: SO_0000673
so part of: CPHY_RS01400
location: 319531..319989
location: region:319531-319989:1
so has part: feature:319531-319989:1:exon

WP_012198288.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:319531-319989:1:exon

CPHY_RS01405
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: uvrB
locus tag: CPHY_RS01405
old locus tag: Cphy_0259
so part of: sequence
location: 320208..322196
location: region:320208-322196:1
so has part: feature:320208-322196:1:exon
subclass of: SO_0000010

position:320208:1
position: 320208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322196:1
position: 322196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320208-322196:1:exon

CPHY_RS01405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: uvrB
locus tag: CPHY_RS01405
old locus tag: Cphy_0259
EC number: 3.1.25.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016439397.1
GO component: GO:0009380 - excinuclease repair complex [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0006289 - nucleotide-excision repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: excinuclease ABC subunit UvrB
translation: MDHFKLVSEFAPTGDQPEALEALVKGFEEGNQFETLLGVTGSGKTFTMANVIQRLNRPTLIIAHNKTLAAQLYGEFKEFFPENAVEYFVSYYDYYQPEAYVPSTDTYIEKDSAINDEIDKLRHSATAALTERRDVIIVASVSCIYGLGSPVDYQNMTLSLRPGMIRDRDDVLRRLVEIQYTRNDMDFKRGTFRVRGDVVEIFPITGTDLAYRVEFFGDEVERITEIDVLTGEIKCTLEHMVIFPASHYVVSKDNLERAIVNIEEELEDRIRYFKSEDKLLEAQRISERTHFDIEMLRETGFCSGVENYSMHLAGLTPESTPHTLIDYFPDDFLIMVDESHITIPQVRGMYAGDQSRKTTLVDFGFRLPSAKSNRPLNFTEFESKINQMLFVSATPNVYEKDHELLRAEQIIRPTGLLDPVVEVRPVHGQIDDLVSEVNKETAKKNKVMITTLTKRMAEDLTDYMRELGIRIKYLHSDIDTLERSEIIRDMRMDVFDVLVGINLLREGLDIPEISLVAILDADKEGFLRSETSLIQTIGRAARNAEGRVIMYADRITDSMDKALRETERRRKIQDEYNEKHGITPQTIKKKVRELISISKKVSKEMYDMNIKDYESMSRKELEAVAKKLTKEMHTAAAELNFELAAELRDKLLELKKQINELE
SIO_010081: CPHY_RS01405
subclass of: SO_0000673
so part of: CPHY_RS01405
location: 320208..322196
location: region:320208-322196:1
so has part: feature:320208-322196:1:exon

WP_012198289.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:320208-322196:1:exon

CPHY_RS01410
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: uvrA
locus tag: CPHY_RS01410
old locus tag: Cphy_0260
so part of: sequence
location: 322207..325050
location: region:322207-325050:1
so has part: feature:322207-325050:1:exon
subclass of: SO_0000010

position:322207:1
position: 322207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325050:1
position: 325050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:322207-325050:1:exon

CPHY_RS01410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: uvrA
locus tag: CPHY_RS01410
old locus tag: Cphy_0260
EC number: 3.1.25.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009460445.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006289 - nucleotide-excision repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: excinuclease ABC subunit UvrA
translation: MADNKHFIKIRGAKEHNLKGISVDIPRDEFVVLTGLSGSGKSSLAFDTIYAEGQRRYMESLSSYARQFLGQMEKPNVESIEGLSPAISIDQKSTNRNPRSTVGTVTEIYDYFRLLYARIGIPHCPICGKEIKKQTVDQMVDEIMRLPEGTKLQLLSPVVRGRKGEHTKIFEQAKKSGYVRVMVDGNLYELTEEIKLEKNKKHNIEIMVDRIVVKAGIEKRLTDSVESVLKLSDGLLIVDVIGGEQLTFSQSFSCPDCGISMEEMEPRTFSFNNPFGACPECHGIGIKMEFAEELLIPDTSQSIDEGAIAAMGWASVTDKGSYTRATMEALSKEYDFSLSTPYRDYPDKVKYIIMHGTDGKTVKVHYQGQRGVGVYDVAFEGLIRNMERRYRETGSETQRAEYETFMNTTPCKACKGKRLKREALAVTVGDRNIAEVTEISIRELHEFMNQLTLTSMQLKIGELVLKEIRARIGFLMDVGLDYLTLARATGTLSGGEAQRIRLATQIGSGLVGVAYILDEPSIGLHQRDNDKLLKTLKHLKELGNTLIVVEHDEDTMFAADCIVDIGPGAGEHGGEVVAVGTAQEIMDNPNSITGAYLSGRIKIPVPKVRKEPTGFLTIKGAKENNLRNVNVDIPLGVMTCVTGVSGSGKSSLVTQILYKRLARDLNRARCIPGKHDDMIGIDKLDKVINIDQSPIGRTPRSNPATYTGVFDQIRDLFAATPDAKMKGYSKGRFSFNVKGGRCEACSGDGIIKIEMNFLPDIYVPCEVCGGKRYNRETLEVRYKGKSIYDILDMTIEEAVKFFENVPSIKRKIETLNDVGLSYLKLGHPSTSLSGGEAQRIKLATELSKRSTGKTIYILDEPTTGLHFADVHKLVEILQRLSEGGNTVVVIEHNLEVIKTADYIIDIGPEGGDKGGTVIAKGTPEEIAKVKESYTGYYLKKYLEEVRE
SIO_010081: CPHY_RS01410
subclass of: SO_0000673
so part of: CPHY_RS01410
location: 322207..325050
location: region:322207-325050:1
so has part: feature:322207-325050:1:exon

WP_012198290.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:322207-325050:1:exon

CPHY_RS01415
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: yfbR
locus tag: CPHY_RS01415
old locus tag: Cphy_0261
so part of: sequence
location: 325091..325672
location: region:325091-325672:1
so has part: feature:325091-325672:1:exon
subclass of: SO_0000010

position:325091:1
position: 325091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325672:1
position: 325672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:325091-325672:1:exon

CPHY_RS01415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: yfbR
locus tag: CPHY_RS01415
old locus tag: Cphy_0261
EC number: 3.1.3.89
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004849570.1
GO function: GO:0002953 - 5'-deoxynucleotidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 5'-deoxynucleotidase
translation: MEYHFYAMMSRMKYIERWALMRNAISENISEHSLEVSMLAHALAVIGKKRFHKELNAEKAALIGLYHDATEIITGDMPTPIKYYNRDILGAFQKIEENAANQLLGMLPEDIREEYHSIFFPEEAESYLWKLVKGADKLSALIKCMEEEKTGNTEFVKAKASIEEALEKMELPEVELFMKEYLPSYAKSLDELR
SIO_010081: CPHY_RS01415
subclass of: SO_0000673
so part of: CPHY_RS01415
location: 325091..325672
location: region:325091-325672:1
so has part: feature:325091-325672:1:exon

WP_012198291.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:325091-325672:1:exon

CPHY_RS01420
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01420
old locus tag: Cphy_0262
so part of: sequence
location: complement(325777..326940)
location: region:325777-326940:-1
so has part: feature:325777-326940:-1:exon
subclass of: SO_0000010

position:325777:-1
position: 325777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326940:-1
position: 326940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:325777-326940:-1:exon

CPHY_RS01420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01420
old locus tag: Cphy_0262
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016359711.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FprA family A-type flavoprotein
translation: MNKVELKPGIYDVGAIDWNVRMFHGYTTNRGATYNAFLIIDEKITLIDAVKVGFTEELLNRIREIIDPAKIDYVISNHVEMDHSGALPGVMEVAKNATLVTSAPNGLKGLMAHYGKDYNYLPVKSGDTLSIGKRTLSFIGTPMLHWPDNMVTYCPEEKILFSNDAFGQHYATNKRFDDEVDLDKAMQEALKYYANIIQPYQLPMKKTLPLIEALDIDMIATSHGVIWRSHVKDIIDKYKEWSSGENEEKALVIYDSMWHSTEKMAFSIVEGLSRKGLTTHLFDLKETHISDIMSEVLKADYIIVGSPTLNHCMLPTVASFLCYLEGLTLKNKKAFAFGSYGWGGQSVPAVHAKLASLGYEMVLDPIKINYIPTHDQLREIEDKVAEL
SIO_010081: CPHY_RS01420
subclass of: SO_0000673
so part of: CPHY_RS01420
location: complement(325777..326940)
location: region:325777-326940:-1
so has part: feature:325777-326940:-1:exon

WP_012198292.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:325777-326940:-1:exon

CPHY_RS01425
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01425
old locus tag: Cphy_0263
so part of: sequence
location: 327683..329335
location: region:327683-329335:1
so has part: feature:327683-329335:1:exon
subclass of: SO_0000010

position:327683:1
position: 327683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:329335:1
position: 329335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327683-329335:1:exon

CPHY_RS01425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01425
old locus tag: Cphy_0263
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005540273.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VWA domain-containing protein
translation: MNQSRVLKRIALILSIILILPNVVACSSKMDRENSTTGQNGSKSSSDINFGSQVALQDTTSLSKTESDGLYVSYKLDGDNSNNMDFSTEEYNAVIEQGYQSTKNHPLSTFSADVDTASYSNIRRMLKEGRRVDTGAVRIEEMLNYFNYDYKLPEGDSPFGITTELSDCPWNPDTKLFLAGIQTEKIDFSKSAPSNLVFLIDVSGSMMDEDKLPLVQRAFLLLTENLTEKDRISIVTYAGNDTVVLSGAKGNQKEKIQNAITELEAGGSTFGSKGIETAYQLAMENYIEGGNNRVILATDGDLNVGVTSESELTNLIEEKRKSGVALSVLGFGTGNIKDNKMEALADHGNGNYAYIDSLMEARKVLVEEMGATLVTVAGDVKFQVEFNPAKVKGYRLLGYDNRLLATEDFNDDTKDAGEVGAGHSVTVLYELVLEDSKMEIPETELKYTTTEPTNMVDELLTVNIRYKKPGKDKSILMSEPVGINQLADTRTDNLAFATAVAEFGLLLKDSEYKGDATFSKVLSRLEETNYKQDEYRAEFYQLVKLAKDIY
SIO_010081: CPHY_RS01425
subclass of: SO_0000673
so part of: CPHY_RS01425
location: 327683..329335
location: region:327683-329335:1
so has part: feature:327683-329335:1:exon

WP_242657962.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:327683-329335:1:exon

CPHY_RS01430
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: guaA
locus tag: CPHY_RS01430
old locus tag: Cphy_0264
so part of: sequence
location: 329763..331298
location: region:329763-331298:1
so has part: feature:329763-331298:1:exon
subclass of: SO_0000010

position:329763:1
position: 329763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331298:1
position: 331298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329763-331298:1:exon

CPHY_RS01430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: guaA
locus tag: CPHY_RS01430
old locus tag: Cphy_0264
EC number: 6.3.5.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002568530.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO process: GO:0006177 - GMP biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamine-hydrolyzing GMP synthase
translation: MNKEMVIVLDFGGQYNQLIARRVRECNVYCEVMPYNISLEKIKELNPKGIIFTGGPASVYAEGAPHCDKGIFELGIPVLGICYGAQLMTHLLGGSVTSAEVREYGKTEIKVNTTSKLFKDVAENTICWMSHTDHIKTPAEGFVVTSSSDSCPVAAVEMVDKKLYSVQFHPEVVHTQEGTKMLRNFLYEVCECNGDWKMASFTEESIQALRDKIGDKKVLCALSGGVDSSVAAVMISKAVGKQLTCIFVDHGLLRKNEGDEVEQIFTTQFDVNFVRVNAQQRFYDRLAGVTDPETKRKIIGEEFIRVFEEEAKKIGTVDFLAQGTIYPDVIESGLGKSAVIKSHHNVGGLPEHVDFKEIVEPLRLLFKDEVRKAGLELGIPEKLVFRQPFPGPGLGIRIIGEVTPERIKLVQEADAIYREEIANAGLDRSIGQYFAALTNMQSVGCMGDERTYDYAIALRAVTTTDFMTAEFAELPWELLGKVSSRIVNEVKGVNRVLYDCTGKPPATIEFE
SIO_010081: CPHY_RS01430
subclass of: SO_0000673
so part of: CPHY_RS01430
location: 329763..331298
location: region:329763-331298:1
so has part: feature:329763-331298:1:exon

WP_041703057.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:329763-331298:1:exon

CPHY_RS01435
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01435
old locus tag: Cphy_0265
so part of: sequence
location: 332463..332927
location: region:332463-332927:1
so has part: feature:332463-332927:1:exon
subclass of: SO_0000010

position:332463:1
position: 332463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:332927:1
position: 332927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332463-332927:1:exon

CPHY_RS01435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01435
old locus tag: Cphy_0265
inference: COORDINATES: protein motif:HMM:NF025638.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4365 domain-containing protein
translation: MTKWKKNKKVEKEGVIYLENLVNNHGSIFREVPGDKDTGIDGFIEFVDSEEATGRLLAVQVKSGDSYYNSEKKKFILYPDQEHLDYWKSYTLPVIVVFYSPTEGCSAWIGIEEHIKNLKYHNKPLLSRIEVNNEGYNKVGIDLDDLKELYGYEV
SIO_010081: CPHY_RS01435
subclass of: SO_0000673
so part of: CPHY_RS01435
location: 332463..332927
location: region:332463-332927:1
so has part: feature:332463-332927:1:exon

WP_012198295.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:332463-332927:1:exon

CPHY_RS01440
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01440
old locus tag: Cphy_0266
so part of: sequence
location: 332911..333495
location: region:332911-333495:1
so has part: feature:332911-333495:1:exon
subclass of: SO_0000010

position:332911:1
position: 332911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333495:1
position: 333495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332911-333495:1:exon

CPHY_RS01440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01440
old locus tag: Cphy_0266
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDMKYDSTKLLKSLDRCFDKDSDIVYRNFQILINHPDSRDNKGIIKVARELLEGNDKEIVKEALWYLGSCVGSQRWSWNPNNIEEKNLIEFSRNICSDISSGVIYKLLCHVDDEYFSGLMGLGERLLDIISCCYDNAYSVLDNTVLNVSEPMNRRTNALFYLYGGDEELMEDDIKNRGNNSKYKDVFDYLTHGY
SIO_010081: CPHY_RS01440
subclass of: SO_0000673
so part of: CPHY_RS01440
location: 332911..333495
location: region:332911-333495:1
so has part: feature:332911-333495:1:exon

WP_012198296.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:332911-333495:1:exon

CPHY_RS01445
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01445
old locus tag: Cphy_0267
so part of: sequence
location: 333780..335354
location: region:333780-335354:1
so has part: feature:333780-335354:1:exon
subclass of: SO_0000010

position:333780:1
position: 333780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335354:1
position: 335354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333780-335354:1:exon

CPHY_RS01445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01445
old locus tag: Cphy_0267
inference: COORDINATES: protein motif:HMM:NF014442.2
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006304 - DNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Eco57I restriction-modification methylase domain-containing protein
translation: MDEKSTGSFYTPVNLIKYMVSYIETKRKPTSILEPSAGDGRFVDFVRKFDIPITLIEYDKKKVNQLRKKYRGVCSIHKADFNRFAQRNNRKYDLIIGNPPYISKKNMTKELKEQSEKVVDSFGLAKDLFQNIWVPFILSSINMLELNGRIFFILPFEFLQVQYAEKLRIFLETKFNIIEIITFEEQIFEGIEQDICLLYLENDKIGSPYIMYRTLNNPSEREEKFQSVIMRNKPLKKWSNCILNDNETESLFNIANKFKRVNEFGDISPGIVTGANAFFIISKDEYCKLNVDNNIGLPIISRSKDVKDCLLFGKEDYDRLYSDNAKVTMLNLNGVVEKSFSSELVDYLEKGKEKKINERYKCSIRNRWYDVPIIRKGTVSFFKRYSIVPRIIVNDADVHTTDVAYNIRLKEQYDSNSFAFCFYNSLTLALCEYEGRFYGGGVGELVPNEFKGLSMPYVKVEDEKILHLDKLFREGANIEEIVDYVDSVVFATFEENDKQLLKAIRMRYLKRRLKIYEKEIDING
SIO_010081: CPHY_RS01445
subclass of: SO_0000673
so part of: CPHY_RS01445
location: 333780..335354
location: region:333780-335354:1
so has part: feature:333780-335354:1:exon

WP_012198297.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:333780-335354:1:exon

CPHY_RS01450
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01450
old locus tag: Cphy_0268
so part of: sequence
location: 335347..337563
location: region:335347-337563:1
so has part: feature:335347-337563:1:exon
subclass of: SO_0000010

position:335347:1
position: 335347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337563:1
position: 337563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335347-337563:1:exon

CPHY_RS01450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01450
old locus tag: Cphy_0268
inference: COORDINATES: protein motif:HMM:NF024977.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sensor histidine kinase
translation: MDNNVVGNVNFKFAARFSKLIGRNLISNPIVAVSELVKNSYDADADNITVEFKNLVTGVSQLIVKDDGDGMSLDDIQNKWMIVGTDNKIHNPNTKSGRRKLGEKGIGRFSVERLSRKLKITTTEFGKDFALVFEIDWDKDEAEADEFGIVNHPVYKIPFERNIKGTEIIMEELRDEWTEDSLVDLRKELNLIRPININSVSYEKYKFPGDKVKINLYAPDFIKSVNKVDANFMSYRQAHLYGKINKDGSAIIRVSIKSNISMSGQVNEQTYTYKNEELDNSCGPVVYEAFVFLKDKRLYRSLDIDRKYMDDFLKSYSGVKIYRDGFRILPFGNVDNDWLELNAQRTKSPEHRMSTQNIIGIVYITRDENPGLQDVLSRENMYETKEFDALKTFVNLSFEKYTSLQLNARKKKEKKIREEGKKTLSNVRKSVNDFSKQVDDLKVSVKQVNVNVDTVEAVNQVQQKLTSILQAAESSLENFKKAFSYYKFQDDFKTREMQIYRNIATLGISAAMFGHEALHQTLDAKAICGDIKADYSEIINSTNQLKEYFNDLEKDIGLVNEKADFFRSYLKREKQDRVRYVNIKEIVETIINQHKKAFEAIEVLPQLNVKISDDNIYTWGYEGDFETIFTNLVTNSYKALKKEKNEKIFYINLEFENNAYIITSVNNGKVIEKENRIKIFQPLFSSYSDGTGLGLTIVQDTVLNYSGTIELCKDYPLTKFKIVIPRQLETKEDVDDVN
SIO_010081: CPHY_RS01450
subclass of: SO_0000673
so part of: CPHY_RS01450
location: 335347..337563
location: region:335347-337563:1
so has part: feature:335347-337563:1:exon

WP_012198298.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:335347-337563:1:exon

CPHY_RS01455
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01455
old locus tag: Cphy_0269
so part of: sequence
location: 337553..338248
location: region:337553-338248:1
so has part: feature:337553-338248:1:exon
subclass of: SO_0000010

position:337553:1
position: 337553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338248:1
position: 338248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337553-338248:1:exon

CPHY_RS01455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01455
old locus tag: Cphy_0269
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSINILIIDDDKKAVERLINSLRRADTNNIIGECVVDDSVIYEDNIEKYNPMKFGVRFDVLLVDYQLNSQFTGALVAAWIMLQLKIPKLTLTSGIYAGPREGFEGFILKDELLDNPQMIIKKLVSVIDNFNSKKWFEEQHQALVSEYQVQLENKTLLQTNFADDKNLLLLEKILDKFEKVLDEEQEKEIKARMNICSQKESYNEIYESQNKKIDELDQTLEDLFTELSQYE
SIO_010081: CPHY_RS01455
subclass of: SO_0000673
so part of: CPHY_RS01455
location: 337553..338248
location: region:337553-338248:1
so has part: feature:337553-338248:1:exon

WP_012198299.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:337553-338248:1:exon

CPHY_RS01460
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01460
old locus tag: Cphy_0270
so part of: sequence
location: 338241..339011
location: region:338241-339011:1
so has part: feature:338241-339011:1:exon
subclass of: SO_0000010

position:338241:1
position: 338241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339011:1
position: 339011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338241-339011:1:exon

CPHY_RS01460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01460
old locus tag: Cphy_0270
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: HNH endonuclease
translation: MNSSIMKKLKYNNKPTYNKPSGYREYLREISDYSCEYCTITESECSGATFNIDHFRPKAYFPQYFSTCENLRYTCPRCNSYKNDKWIETEKGCIRNCEQCNNKACHENISRFIDNLYEDPQEVLELDDYGVLKAISGSNPADYTIKFLRLNRAQLIKLRKIRRFIDLWNEELLAKRKEILLRNENLSLKIKRFDELKRHTFHSPKEECMLKIISTTLELLQIQIDQELVLINDQLEKIEVLQKNRKISDDSFLNMI
SIO_010081: CPHY_RS01460
subclass of: SO_0000673
so part of: CPHY_RS01460
location: 338241..339011
location: region:338241-339011:1
so has part: feature:338241-339011:1:exon

WP_012198300.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:338241-339011:1:exon

CPHY_RS01465
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01465
old locus tag: Cphy_0271
so part of: sequence
location: 339345..339923
location: region:339345-339923:1
so has part: feature:339345-339923:1:exon
subclass of: SO_0000010

position:339345:1
position: 339345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339923:1
position: 339923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339345-339923:1:exon

CPHY_RS01465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01465
old locus tag: Cphy_0271
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MESENINSEWNKQIVNHRQYNKICSKHGSVLVKSPNSKCRRCIEEMKNNYNDLNHNGIVKIIEKLKNKYDVIMVPTYIPEGSVRWNGRRKNFENPLSEIYNLYYFVYIKFCVNKEGVIRALVAGKTGSKKVNYSGSDINFFESVNHGEARKLLKEKNMKWYKDEILVIKADDEDSAYRIENEVQECFNLFGS
SIO_010081: CPHY_RS01465
subclass of: SO_0000673
so part of: CPHY_RS01465
location: 339345..339923
location: region:339345-339923:1
so has part: feature:339345-339923:1:exon

WP_012198301.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:339345-339923:1:exon

CPHY_RS01470
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01470
old locus tag: Cphy_0272
so part of: sequence
location: 340147..340566
location: region:340147-340566:1
so has part: feature:340147-340566:1:exon
subclass of: SO_0000010

position:340147:1
position: 340147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340566:1
position: 340566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340147-340566:1:exon

CPHY_RS01470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01470
old locus tag: Cphy_0272
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNKAKLSSFAIAGAIGLASLSPITTVAAETKTQSTMQTEIKTDCKDCKDKKAEFNKKMKAARERWNSLSQTQKDEVYSLLENKMKENNKVLDKLVELKVLEQSDVDNLKANQATKFQKIKENGEFPMLRGKGMDRNHTR
SIO_010081: CPHY_RS01470
subclass of: SO_0000673
so part of: CPHY_RS01470
location: 340147..340566
location: region:340147-340566:1
so has part: feature:340147-340566:1:exon

WP_012198302.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:340147-340566:1:exon

CPHY_RS01475
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01475
old locus tag: Cphy_0273
so part of: sequence
location: 341024..341944
location: region:341024-341944:1
so has part: feature:341024-341944:1:exon
subclass of: SO_0000010

position:341024:1
position: 341024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341944:1
position: 341944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:341024-341944:1:exon

CPHY_RS01475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01475
old locus tag: Cphy_0273
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005814967.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fic family protein
translation: MEYMSVKEAALKWHISDRRIRVLCSEEKISGIRKEGKNYRIPVDALKPVDGRTLRGKDIPQEYKEVFARIDAKKAELQKRRPLTQGELERLREEFLIEFTYNSNAIEGNTLTLQETASVLEGITIDKKPLKDHLEVVGHKEAFLYIVELVSKQVQISEKVIKEIHSLILVDRPHDRGAYRQIPARIKGSVYIPPQPFLVPIQMEELMKDDSLRVNKMHLIERLARFHMEFERIHPFIDGNGRIGRLLMNLELMQQGFPPTNVKFADRKRYYECFADYQEHNNASKMIIMLADYMEEELDRYLEILG
SIO_010081: CPHY_RS01475
subclass of: SO_0000673
so part of: CPHY_RS01475
location: 341024..341944
location: region:341024-341944:1
so has part: feature:341024-341944:1:exon

WP_012198303.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:341024-341944:1:exon

CPHY_RS01480
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: rsmH
locus tag: CPHY_RS01480
old locus tag: Cphy_0274
so part of: sequence
location: 342030..343130
location: region:342030-343130:1
so has part: feature:342030-343130:1:exon
subclass of: SO_0000010

position:342030:1
position: 342030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343130:1
position: 343130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:342030-343130:1:exon

CPHY_RS01480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: rsmH
locus tag: CPHY_RS01480
old locus tag: Cphy_0274
EC number: 2.1.1.199
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198304.1
GO function: GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
translation: MADQNINKNEKVLTGQPTENQEPVHKRRERYKGTHPKTFKEKYKERQPEKYADTIEKVIQKGSTPAGMHISICVNEILEFLQIKPGQKGLDATLGYGGHTREMLKCLESQGHMYALDVDPIEIVKTRERLQNLGFGPEILTIKQLNFANIDEVVEEAGLFDFVLADLGVSSMQIDDPDRGFSFKTDGPLDLRLNPEKGISAAERLKTISQTELQGMLLENSDEPYSEEISKAIVNEIKRGNEIDTTTKLRDLISKVLVTIPENEQKEAIKKTCQRTFQALRIDVNNEYEVLYSFLEKLPNVLAKGGRVAILTFHSGEDRLVKKSFKNLQRAGIYSEVSDDVIRPSAEECNRNPRARSTKMRWAIKA
SIO_010081: CPHY_RS01480
subclass of: SO_0000673
so part of: CPHY_RS01480
location: 342030..343130
location: region:342030-343130:1
so has part: feature:342030-343130:1:exon

WP_012198304.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:342030-343130:1:exon

CPHY_RS01485
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01485
old locus tag: Cphy_0275
so part of: sequence
location: 343239..344069
location: region:343239-344069:1
so has part: feature:343239-344069:1:exon
subclass of: SO_0000010

position:343239:1
position: 343239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344069:1
position: 344069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343239-344069:1:exon

CPHY_RS01485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01485
old locus tag: Cphy_0275
inference: COORDINATES: protein motif:HMM:NF039407.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MDNEKMALFIADQRKIKKLTQKELAAKLGVTDKAVSKWERGLSCPDISLLSTLSDILGVTTGELLNGERAVMLENTNVDSIVESTIQYADTVTKRKSKDIRNAFAVTITSLFLLGIMVCLICNFAISGKLTWAWFPISSIIYMWLLVIPMVICKKRGVCISLVCTSLFTIPYLYVLERVIGIDRLIMPIAMPVSIVSLLYLWIVYVLLVKFTWGRYLSASIALIFGIPLSFGINFILSKQIGEPIMDIWDILVYSLLILLAVIIYVTGYIRNNARK
SIO_010081: CPHY_RS01485
subclass of: SO_0000673
so part of: CPHY_RS01485
location: 343239..344069
location: region:343239-344069:1
so has part: feature:343239-344069:1:exon

WP_012198305.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:343239-344069:1:exon

CPHY_RS01490
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01490
old locus tag: Cphy_0276
so part of: sequence
location: complement(344532..345398)
location: region:344532-345398:-1
so has part: feature:344532-345398:-1:exon
subclass of: SO_0000010

position:344532:-1
position: 344532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345398:-1
position: 345398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344532-345398:-1:exon

CPHY_RS01490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01490
old locus tag: Cphy_0276
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018594414.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MerR family transcriptional regulator
translation: MKTVKQVAELTGISVRTLQYYDEIDLFKPSEVTDAGYRLYDDVSLETLQQILFFKELDFPLKDIKQIMENPQYDKFTAYKKQKELIRAKRDRLDRLLNLLEKLERGEQCMSFKEFDMSDYFHALQQFKSDHTDEVVKHWGSIEAFDSMLENFKDKESEIAKLAIQQYGSIEKYTEAMKANLKNFPETMEKLQSLGKDKDDYLTRSKEINEKLTKDLTLDVASNEVQELVKEMVLLSNEVNKGFDMGENFWDMVIEGYLHSEQLIKANDSLYGEGASAFIGRALEEYFK
SIO_010081: CPHY_RS01490
subclass of: SO_0000673
so part of: CPHY_RS01490
location: complement(344532..345398)
location: region:344532-345398:-1
so has part: feature:344532-345398:-1:exon

WP_012198306.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:344532-345398:-1:exon

CPHY_RS01495
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01495
old locus tag: Cphy_0277
so part of: sequence
location: 345854..346531
location: region:345854-346531:1
so has part: feature:345854-346531:1:exon
subclass of: SO_0000010

position:345854:1
position: 345854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:346531:1
position: 346531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345854-346531:1:exon

CPHY_RS01495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01495
old locus tag: Cphy_0277
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008372378.1
GO component: GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YoaK family protein
translation: MKKQKQISESLQLGIILALSGGFMDAYSYVCRGKVFANAQTGNILLCGVHLSEGNWQLALRYLCPIIAFALGLILANVVQFHLKDKKVIHWRQITILFEAAVLFLVGFMPQSANLLANSITSFACAIQLESFRKINGNGIATTMCIGNLRSATQSICEFLYTKEKITLFRGLLYFTIIGFFAIGAILGNVSVKLLQEKAIIISTLFLLVGFAMMFFNGEDEKVID
SIO_010081: CPHY_RS01495
subclass of: SO_0000673
so part of: CPHY_RS01495
location: 345854..346531
location: region:345854-346531:1
so has part: feature:345854-346531:1:exon

WP_012198307.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:345854-346531:1:exon

CPHY_RS01500
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01500
old locus tag: Cphy_0278
so part of: sequence
location: 346628..347287
location: region:346628-347287:1
so has part: feature:346628-347287:1:exon
subclass of: SO_0000010

position:346628:1
position: 346628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347287:1
position: 347287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346628-347287:1:exon

CPHY_RS01500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01500
old locus tag: Cphy_0278
inference: COORDINATES: protein motif:HMM:NF014826.2
GO function: GO:0003824 - catalytic activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PHP domain-containing protein
translation: MKVEMHMHTSEISPCAAVRAIEGVREYKKASYNGIVITDHFNDYVLNGFIGSDREKVARFLTGYEMAKEQGEELGITVFFGIETCLLGAQNDFLLYGLQPEFLYEYPKLYSLSIKELHQVVGEAGGIVVQAHPYRGYCTIEDPKYLDGVEVYNGNPRHNSRNHLAKDFAKHYPHLIETSGSDYHQLSDLASGGMIFPRELHTETELKEALLARDYELIQ
SIO_010081: CPHY_RS01500
subclass of: SO_0000673
so part of: CPHY_RS01500
location: 346628..347287
location: region:346628-347287:1
so has part: feature:346628-347287:1:exon

WP_012198308.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:346628-347287:1:exon

CPHY_RS01505
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01505
old locus tag: Cphy_0279
so part of: sequence
location: complement(347574..348416)
location: region:347574-348416:-1
so has part: feature:347574-348416:-1:exon
subclass of: SO_0000010

position:347574:-1
position: 347574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348416:-1
position: 348416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347574-348416:-1:exon

CPHY_RS01505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01505
old locus tag: Cphy_0279
inference: COORDINATES: protein motif:HMM:NF040016.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6179 domain-containing protein
translation: MEYQIEDLLPVVAKLTEKYTSKESSSVTYETARMLMEAVIYCLNEAEAENDYSLVDEKQPNLALLYERGLNLVIEKTKEAKNLYDSIIENFEDYGCVNYIDTILKGMPAFFTRYDARFQPQNHLLTLDYPLIIDLPNLCGIDLIFSYLRGIRIEQHFLHCFDRFAIRNLLVNILPDYQSLYFDNLSYPVLLNAVGRCIVKKPLKTLMLKYSDCDLIKAYFNGDDVRTMEQKIKLLIQTIVSPLEDDIALIYFAKAAKDYAVRIQMGIQHGTLDRIFLCSV
SIO_010081: CPHY_RS01505
subclass of: SO_0000673
so part of: CPHY_RS01505
location: complement(347574..348416)
location: region:347574-348416:-1
so has part: feature:347574-348416:-1:exon

WP_012198309.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:347574-348416:-1:exon

CPHY_RS01510
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01510
old locus tag: Cphy_0280
so part of: sequence
location: complement(348483..349025)
location: region:348483-349025:-1
so has part: feature:348483-349025:-1:exon
subclass of: SO_0000010

position:348483:-1
position: 348483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349025:-1
position: 349025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:348483-349025:-1:exon

CPHY_RS01510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01510
old locus tag: Cphy_0280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006568816.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6323 family protein
translation: MDSNFFELILLQNKQNELSTLISCNDKTEQFGLTLTNEEAEELMVCRNDSLRKHKRVEFNNGILDKLIYAFCDSQYISQDNYVELLEELQDIFYEFKNESEDKLTDDELITFMKEQFESVCFGDIDYLSGTCLERFCSAIRAGYEGYKRTGGSHEYDQFSEEARWDKDLYLEVLRELCWR
SIO_010081: CPHY_RS01510
subclass of: SO_0000673
so part of: CPHY_RS01510
location: complement(348483..349025)
location: region:348483-349025:-1
so has part: feature:348483-349025:-1:exon

WP_012198310.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:348483-349025:-1:exon

CPHY_RS01515
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01515
old locus tag: Cphy_0281
so part of: sequence
location: 349185..349946
location: region:349185-349946:1
so has part: feature:349185-349946:1:exon
subclass of: SO_0000010

position:349185:1
position: 349185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349946:1
position: 349946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349185-349946:1:exon

CPHY_RS01515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01515
old locus tag: Cphy_0281
inference: COORDINATES: protein motif:HMM:NF013232.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleoside phosphorylase
translation: MILEEFDSNKKAIINPEEIIEKIPDFPRVGVSCFSLTLFNRIISILNPSKIAQTGTASTQVIIYEITYHDVKIAFYMSPVGAPACAAVYEDLIAMGLDKLVLFGTCGVLDRTIADCSIIIPTSAVRDEGTSYHYMPASDEIKVNNKGIDIFKEILSKHHYSYTEGKIWTTDGIYRETREKLEKRKSMGCICVDMECSAMAAVAAFRECELFHFFYAADNLDSDNWDARSLGNLVKLDEKEKIALLALEMASKF
SIO_010081: CPHY_RS01515
subclass of: SO_0000673
so part of: CPHY_RS01515
location: 349185..349946
location: region:349185-349946:1
so has part: feature:349185-349946:1:exon

WP_012198311.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:349185-349946:1:exon

CPHY_RS01520
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01520
old locus tag: Cphy_0282
so part of: sequence
location: 350094..351305
location: region:350094-351305:1
so has part: feature:350094-351305:1:exon
subclass of: SO_0000010

position:350094:1
position: 350094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351305:1
position: 351305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350094-351305:1:exon

CPHY_RS01520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01520
old locus tag: Cphy_0282
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYSIIEKPLWTKEYVNELFLSRNTKDKKQLRNSLLYFFTVTILGIGVGLITNSILLSEENSKFWLIAILFTWLDGILLIVIHEAGHFVGGIITSYRFQSFRVFSYCIVKEDNKYKIEKRKIPGTSGQCLMKPPKNWTLDSPFFLYHAGGGIATFLVSMLSLLLFKLTSSPLAQIIFFILFGYGLILTIINLVPLQLPSSNNDGANILAIRRDKTAKETFFKQLECNAWLSDGRKLEDISEDYLKLSENAVWSEPLNYYLEWILYSKFLKEREFDKAEELLMKMEEAYHDMLPSKKIRIDSERLYLLIIRQVDTDCINTFYKNVADKLRIQKLCTPILRTLIAYEKYSNNNNNNNNKCALEQYQRMFYRAMKSAACKQEAEVDYILTYQVEEACDTEKGSSDLI
SIO_010081: CPHY_RS01520
subclass of: SO_0000673
so part of: CPHY_RS01520
location: 350094..351305
location: region:350094-351305:1
so has part: feature:350094-351305:1:exon

WP_012198312.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:350094-351305:1:exon

CPHY_RS01525
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01525
old locus tag: Cphy_0283
so part of: sequence
location: 351565..352659
location: region:351565-352659:1
so has part: feature:351565-352659:1:exon
subclass of: SO_0000010

position:351565:1
position: 351565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352659:1
position: 352659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:351565-352659:1:exon

CPHY_RS01525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01525
old locus tag: Cphy_0283
inference: COORDINATES: protein motif:HMM:NF024637.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zinc ribbon domain-containing protein
translation: MAFCTSCGKPIEKTAKFCIHCGEVNKAYENGSAAVMKQTQDKPVEEKKSNEGSYIHPPVNKIKTMDAIKATMPFIIVKGIVQLIVTLVMIVMAIIGIVIITQTGESGVIVVLILGAAFFGIIKFAKRYVLYMIKVAYIAALTSYIKTGESPKVQGYSGVLAYGTNLVKDNFGTANVGFVADALISGAVQQICKFLFKIGDLLSFIPGLKNVIDILTYIISVALNFIDEAILSYIFFHQEEKNSWKKACDAIVYYGQSWKGMFKGAAKVAFSIWGARIVSFFIFMLIGKSFAPTAVAVIISFLLVYALEAIFVEPYMVVVMTKQYYASIENQPLKSDLYAKFTKCSRKFKKLMEKSENEEVPVAA
SIO_010081: CPHY_RS01525
subclass of: SO_0000673
so part of: CPHY_RS01525
location: 351565..352659
location: region:351565-352659:1
so has part: feature:351565-352659:1:exon

WP_012198313.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:351565-352659:1:exon

CPHY_RS20470
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS20470
old locus tag: Cphy_0284
so part of: sequence
location: complement(352773..353978)
location: region:352773-353978:-1
so has part: feature:352773-353978:-1:exon
subclass of: SO_0000010

position:352773:-1
position: 352773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353978:-1
position: 353978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352773-353978:-1:exon

CPHY_RS20470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS20470
old locus tag: Cphy_0284
EC number: 5.2.1.8
inference: COORDINATES: protein motif:HMM:NF012478.2
GO function: GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FKBP-type peptidyl-prolyl cis-trans isomerase
translation: MEKEKESVMSMSKARKIARKKEIEQMKRNAIISKVVSICVVAVLCVGLVSYIGYSIHRKATQVTASSNFSAQLNDKGFIDGVDASSLLNLVDYKTIKAPLSEIEYSDESVAKDIATAVEAKKTLNKETDAAIADGNIVNIDYVGTIDGKEFDGGNTNDNGYELKIGSKKLVDDFEEQLIGHKIGDEVTVNVTFPEDYTNKDLAGKDAEFKVKINGIYDVPEFTDAFVKENLSEYASNVEEYKKYLKDTNYASTLNTYIVSYLADNTTVTSYPEKYVKLSKSLLKFSDQSYYNSMNQYYMENLGAPAYNSFEEYTGVSEAEYDKSLAEPAEKQVKAALIYQAILEKEGVTVTADDYIAYLESQGQTKEDFDNQVETYGKNFVLQEMVKIKALELVKGMVTVE
SIO_010081: CPHY_RS20470
subclass of: SO_0000673
so part of: CPHY_RS20470
location: complement(352773..353978)
location: region:352773-353978:-1
so has part: feature:352773-353978:-1:exon

WP_012198314.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:352773-353978:-1:exon

CPHY_RS01535
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01535
old locus tag: Cphy_0285
so part of: sequence
location: 354430..356565
location: region:354430-356565:1
so has part: feature:354430-356565:1:exon
subclass of: SO_0000010

position:354430:1
position: 354430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356565:1
position: 356565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354430-356565:1:exon

CPHY_RS01535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01535
old locus tag: Cphy_0285
inference: COORDINATES: protein motif:HMM:NF012245.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyl-accepting chemotaxis protein
translation: MKRKMVEKLSHKSLAKRISFLVTKLLAVVFILFIVVSSLISGLSIEKSIRGEVSVLSEKNALKVQGIFDDASSVADIILTYVEKQYVHDSTLSAQEKLPIYQGQVYDDKLTKTDYETEKFIIDIAKSSIINYPTITGVGIMFEPYEFNSKIKNYSIYIKRGYLEAKPGSYGDYDKYSIQPYFTEAKSSLKPVFTDPQDYNGVTFISAAYPIVLDGVFKGVIVVDIDIANFNELEIHNDNYTSMYSTVYTPDGLIVYDSESHVEEGEDLSNFLASEKDYNTILQKFEGEEAFTIHTKRKDGGSETRFLYPIQAGSERWWAQTAISQLDMYKSVIVTVVVLTVFTLAGLLVIVFLVSRAMKKRLAPIQGIVNSAEKIAKGEFDIVAEYKEDDEIGKLARSFANTANTLNLIIDDINYLLNEMASGNFVIESSCTENYVGGFQPILKSVGHINRQLSNTLHEINEAADQVATASSAMADGSSSLAEGCTDQASSVEELVATITSLENDIDENTNKTIEASKKMQLIGETAQESGAKMNELTLAMEKISQSSGQIAEIITTIEGIAEQTNLLSLNAAIEAARAGEAGRGFTVVAEEIRKLANQSALAVQSTRELIVTALSEIESGNEITSQTSESLQQVEVGVKEAIALAEGSKDASISQAQAMREITSVVEQISVVVQNNSATAEESSATSEELSAQAQTLADLVGRFKLREDL
SIO_010081: CPHY_RS01535
subclass of: SO_0000673
so part of: CPHY_RS01535
location: 354430..356565
location: region:354430-356565:1
so has part: feature:354430-356565:1:exon

WP_012198315.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:354430-356565:1:exon

CPHY_RS01540
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01540
old locus tag: Cphy_0286
so part of: sequence
location: 356849..357376
location: region:356849-357376:1
so has part: feature:356849-357376:1:exon
subclass of: SO_0000010

position:356849:1
position: 356849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:357376:1
position: 357376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:356849-357376:1:exon

CPHY_RS01540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01540
old locus tag: Cphy_0286
EC number: 2.1.1.63
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018592147.1
GO function: GO:0003908 - methylated-DNA-[protein]-cysteine S-methyltransferase activity [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methylated-DNA--[protein]-cysteine S-methyltransferase
translation: MKNVFYYNTMIGKLRIEEEDNFIIGVSSSDGDKTDQIKEKQIRETEQINEAEQVKESDLIKRTYLQLMEYFEGKRTTFDVPIRLDGTSFQTKVWEELRKIPYGETRSYGEIAKQVGVPKGARAVGGANHNNPVLIIVPCHRVIGSSGALVGFGAGIPVKELLLKLENQESENILS
SIO_010081: CPHY_RS01540
subclass of: SO_0000673
so part of: CPHY_RS01540
location: 356849..357376
location: region:356849-357376:1
so has part: feature:356849-357376:1:exon

WP_012198316.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:356849-357376:1:exon

CPHY_RS01545
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01545
old locus tag: Cphy_0287
so part of: sequence
location: 357478..358032
location: region:357478-358032:1
so has part: feature:357478-358032:1:exon
subclass of: SO_0000010

position:357478:1
position: 357478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:358032:1
position: 358032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357478-358032:1:exon

CPHY_RS01545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01545
old locus tag: Cphy_0287
EC number: 2.3.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002585893.1
GO function: GO:0008080 - N-acetyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MTEELVIRMATILDAPKLLEIYAPYVRETAITFEYTVPTVQEFESRIAKILTRYPYLVAEKEGEILGYAYVSSFKERAAYDWAVETTIYINQNQRGSGVGKRLYLKLEEIVKRQNIINMNACIAYPNPGSIAFHEHLGYKTVAHFTKCGYKLDRWYDMIWMEKILEEHPEKPKEFIPINKLFIE
SIO_010081: CPHY_RS01545
subclass of: SO_0000673
so part of: CPHY_RS01545
location: 357478..358032
location: region:357478-358032:1
so has part: feature:357478-358032:1:exon

WP_012198317.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:357478-358032:1:exon

CPHY_RS21130
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS21130
so part of: sequence
location: 358116..358217
location: region:358116-358217:1
so has part: feature:358116-358217:1:exon
subclass of: SO_0000010

position:358116:1
position: 358116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:358217:1
position: 358217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358116-358217:1:exon

CPHY_RS21130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS21130
inference: COORDINATES: protein motif:HMM:NF019884.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MEFKDILQMIRKERKLSQEEVAEKIGVSRQKKS
SIO_010081: CPHY_RS21130
subclass of: SO_0000673
so part of: CPHY_RS21130
location: 358116..358217
location: region:358116-358217:1
so has part: feature:358116-358217:1:exon

WP_081428465.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:358116-358217:1:exon

CPHY_RS01550
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01550
old locus tag: Cphy_0288
so part of: sequence
location: complement(358277..359431)
location: region:358277-359431:-1
so has part: feature:358277-359431:-1:exon
subclass of: SO_0000010

position:358277:-1
position: 358277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359431:-1
position: 359431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358277-359431:-1:exon

CPHY_RS01550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01550
old locus tag: Cphy_0288
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009254224.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycoside hydrolase family 88 protein
translation: MNLIDEITNHELKSSISKAVEILRGNLSEFTEKFQDSTSINNFYPVSENVEWTTGFCTGEYWLAWEITGDESFKKAALIQTESFLQRIEKQIDVNHHDMGFLYTPSCVAAWKLTASETGRKAALLAADNLMKRFHEKGGFFQAWGELGAPDNYRLIIDCLLNLPLLYWASEETGNPIYREKALIHTKSSLENLVREDYSTYHTFYFDPIDGKPLRGVTAQGYRNDSAWARGQAWGIYGLALSYRYTNDSGCIDLFYKVADFFINRLPDDIVPYWDLDFAQGSDEPKDSSAACIAACGMLEMAKYLPKDKAEYYMDIAKKIAGSLSRNYTADIGKSNGLLLHGVYAKKSPYNTVTDRGVDECNTWGDYFWFELLIRLFKDWDTYW
SIO_010081: CPHY_RS01550
subclass of: SO_0000673
so part of: CPHY_RS01550
location: complement(358277..359431)
location: region:358277-359431:-1
so has part: feature:358277-359431:-1:exon

WP_012198318.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:358277-359431:-1:exon

CPHY_RS01555
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01555
old locus tag: Cphy_0289
so part of: sequence
location: complement(359443..360273)
location: region:359443-360273:-1
so has part: feature:359443-360273:-1:exon
subclass of: SO_0000010

position:359443:-1
position: 359443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360273:-1
position: 360273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359443-360273:-1:exon

CPHY_RS01555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01555
old locus tag: Cphy_0289
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002600040.1
GO process: GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbohydrate ABC transporter permease
translation: MVERKSAKSQLFIYVLLIFIVAITLLPLVWMFSASLKLNKDVFTIPIQWIPRNPVWKNYITIWKKIPLAKFTTNSFKLTIIVCIIQVFTSSFAAYGFAKCHFPGRNFLFLLYVATISIPWQVYMLPQFIEMRTLGLTNSHLGYVLMQSFIAMGVFLVRQFYISIPDELLEAARIDGLNEYSIYARIVLPLSKPALASLTIMSFVTIWNDFMGPMIYFTRTELKTIPLGIRMFIGQYSAEYSLIMAAAVLSIIPVFAVFMMFQKYFVQSVTSSGVKG
SIO_010081: CPHY_RS01555
subclass of: SO_0000673
so part of: CPHY_RS01555
location: complement(359443..360273)
location: region:359443-360273:-1
so has part: feature:359443-360273:-1:exon

WP_012198319.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:359443-360273:-1:exon

CPHY_RS01560
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01560
old locus tag: Cphy_0290
so part of: sequence
location: complement(360288..361181)
location: region:360288-361181:-1
so has part: feature:360288-361181:-1:exon
subclass of: SO_0000010

position:360288:-1
position: 360288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:361181:-1
position: 361181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360288-361181:-1:exon

CPHY_RS01560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01560
old locus tag: Cphy_0290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002574010.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sugar ABC transporter permease
translation: MNNRKKKLSLRTRNALIGYSFILPNFIGFFIFVFIPVMFSLVLSLVSWNGFGPMKFVGLKNFVTIFKDKNFVNALSRTMYYTFFTVVLTTFIALGLAVLLNNKLRFRGFFRSAVFFPYVASIVAVGVVWNMLFQKDFGPINEFLRWIGIQNPPGWTASVKWAIPAVIIVSVWKYMGYYMIVLLAALQDIPVDLYEAATIDGANRRQYFWRIAAPLLTPALFFVVLMLTVTSFKSFDLIYVMTEGGPGQATTLVVNYIYSKSFISETYGVSSAAAMVLLFIISIITLIQFHAEKKLTN
SIO_010081: CPHY_RS01560
subclass of: SO_0000673
so part of: CPHY_RS01560
location: complement(360288..361181)
location: region:360288-361181:-1
so has part: feature:360288-361181:-1:exon

WP_012198320.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:360288-361181:-1:exon

CPHY_RS01565
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01565
old locus tag: Cphy_0291
so part of: sequence
location: complement(361234..362583)
location: region:361234-362583:-1
so has part: feature:361234-362583:-1:exon
subclass of: SO_0000010

position:361234:-1
position: 361234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362583:-1
position: 362583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361234-362583:-1:exon

CPHY_RS01565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01565
old locus tag: Cphy_0291
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016360105.1
GO component: GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sugar ABC transporter substrate-binding protein
translation: MKNKKLVKVLSSLLAASVIFTGCSSTKNNQPSSADPTPTNNSSESKPTTEPEKNELSGSITFSAWDVDTQMPYIKDMLAEFMSQHPGVNVEIVDIPSADYDTKLNIDLNGGAAADVILVKNASTMPSMNQKGQLVDLNEYIKRDNVDLSSYNGLDKSISINGTQPGLPFRTDYYVLYYNKDIFDTAGVAYPSNDMTWADFEELAKKVTFGEGANKVYGAHLHTWQALVENWAIQDGKNTTMGPDYEFMKPYYEMALRMQNDDKTIMDYATLKTANIHYSGVFQNGSVAMLPMGTWFMATMRDVVSKGECSVNWGVATIPHPEGLEAGNTVGSATPISINAASKNKELAWELIKFMTGDSGASYLASVGQLPARINPELLDTVTSLEGMPEGAKEALQVKNIVLDRPIVDNVNEVDKMLGEEHSLIMLGEVTIDEGIKAFTENSKTIQEQ
SIO_010081: CPHY_RS01565
subclass of: SO_0000673
so part of: CPHY_RS01565
location: complement(361234..362583)
location: region:361234-362583:-1
so has part: feature:361234-362583:-1:exon

WP_012198321.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:361234-362583:-1:exon

CPHY_RS20475
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS20475
old locus tag: Cphy_0292
so part of: sequence
location: 362867..364387
location: region:362867-364387:1
so has part: feature:362867-364387:1:exon
subclass of: SO_0000010

position:362867:1
position: 362867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364387:1
position: 364387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362867-364387:1:exon

CPHY_RS20475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS20475
old locus tag: Cphy_0292
inference: COORDINATES: protein motif:HMM:NF014567.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: histidine kinase
translation: MKHKLKIILMSALCIITVGVCSSVYLYNNLMNIISNKEEGISDLYLETVRNQLNYNLVELVGLSQCRNDLDISKAMRLDKMSSSKEKNLALRASEKLTSYLSNYRTWRYVDKLIAFNEKGISVQAATLGVNRLDDPDRILELNIFNSLLQSGDKQIISLSPSIINGKECIALICQIYDINNSKSNGWLYMEINTDIIADNLSKDLGVNLYVAKADGTYLLGNQITSGVGKTMKTHEIPLSVAGLKLIGFKESISTARSVSSVIITIVVVVLAALVAAILMAIVIISLLRESEVLRNQRKNAEITMLQSQINPHFLYNTLESIQWMAKIQKNTGIVKITRCLISLLRNMAKSVGEKISLGEELALLNDYVELQSIRYMDAFEVVNNIPESFHSYAIIKFSIQPLVENAIFHGVVPSGKNGTITINAIEDGNDLLITVTDDGIGMEPPELRKLSDRMESTSSKGLTGIGLSNVNNRYKLSYGEQYGLTFESESGQYTKVIMRFPKEVV
SIO_010081: CPHY_RS20475
subclass of: SO_0000673
so part of: CPHY_RS20475
location: 362867..364387
location: region:362867-364387:1
so has part: feature:362867-364387:1:exon

WP_012198322.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:362867-364387:1:exon

CPHY_RS01575
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01575
old locus tag: Cphy_0293
so part of: sequence
location: 364406..366004
location: region:364406-366004:1
so has part: feature:364406-366004:1:exon
subclass of: SO_0000010

position:364406:1
position: 364406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366004:1
position: 366004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364406-366004:1:exon

CPHY_RS01575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01575
old locus tag: Cphy_0293
inference: COORDINATES: protein motif:HMM:NF012301.2
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator
translation: MYRVLLVDDEPLILSGVKFLIDWEKNDCILAGTAKNGAQALELIDELKPDIVITDINMPIMNGIELLRHTQENYPAIVFIMLTNLEEFDLAREAMRMKAADYLTKSMMEPQMLENSLTMAKKEAKTRGGFLHAEAAGYYLLENKRKLLTVASEHFISKNEISKHESAILAEHGILEGWACILIWFTAAESTAISNDSEEDTEITSWMNEIVENLAQNSFSNYLIQTRFKNKQRFLLLHWGKSIAENEKQAVIFAKRLSSASENIAGLKASVLYTDVFKKEDKRKECLKQLYDLDTYFYLNKTMLAGYHEIGTTVCNPLGLMGLPKKMEVELNSLSISGCNDIFTKAIHRISEIPHEKEEAIWICEEICDVLKRWFSERGDDIAINSIFQSYKEIEMLTARSQVICWLEKLKKEVLEWLKPLAEHRSDLVDKAKEYVRNNVDKRITLQDTASHVGVSLGYLSSLFKKQDGQNFIDYVNKSKVDRACELIREGGLRLNEISYMLGFENAYYFSKVFRRHVGVTPSEYQNELKNN
SIO_010081: CPHY_RS01575
subclass of: SO_0000673
so part of: CPHY_RS01575
location: 364406..366004
location: region:364406-366004:1
so has part: feature:364406-366004:1:exon

WP_012198323.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:364406-366004:1:exon

CPHY_RS01580
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01580
old locus tag: Cphy_0294
so part of: sequence
location: 366262..366486
location: region:366262-366486:1
so has part: feature:366262-366486:1:exon
subclass of: SO_0000010

position:366262:1
position: 366262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366486:1
position: 366486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366262-366486:1:exon

CPHY_RS01580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01580
old locus tag: Cphy_0294
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKSNRLEKLDPKVEELMSTHPNLRKAPANITNHVEQEPGMMTKQGSSYGANNKCAPDNNIFYEDRSNHLCSKGD
SIO_010081: CPHY_RS01580
subclass of: SO_0000673
so part of: CPHY_RS01580
location: 366262..366486
location: region:366262-366486:1
so has part: feature:366262-366486:1:exon

WP_012198324.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:366262-366486:1:exon

CPHY_RS21550
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS21550
so part of: sequence
location: complement(366577..366726)
location: region:366577-366726:-1
so has part: feature:366577-366726:-1:exon
subclass of: SO_0000010

position:366577:-1
position: 366577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366726:-1
position: 366726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366577-366726:-1:exon

CPHY_RS21550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS21550
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKDFEAYQMANITEDCKQKITDFENEIKNMFGSDVVLVAYEEKGAQVTS
SIO_010081: CPHY_RS21550
subclass of: SO_0000673
so part of: CPHY_RS21550
location: complement(366577..366726)
location: region:366577-366726:-1
so has part: feature:366577-366726:-1:exon

WP_157668637.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:366577-366726:-1:exon

CPHY_RS01585
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01585
old locus tag: Cphy_0295
so part of: sequence
location: complement(366857..369103)
location: region:366857-369103:-1
so has part: feature:366857-369103:-1:exon
subclass of: SO_0000010

position:366857:-1
position: 366857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369103:-1
position: 369103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366857-369103:-1:exon

CPHY_RS01585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01585
old locus tag: Cphy_0295
EC number: 5.6.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005946516.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA topoisomerase (ATP-hydrolyzing)
translation: MKKEAENIIQLDFSEEMKTSFRNYAMSVIMARAIPDVRDGLKPVQRRILYSMIELGLDPKKPHRKSARIVGDTMGKYHPHGDSSIYDALVHMTEPYSMQIPLVDGHGNFGSIDGDGAAAMRYTEARLSDGAMTLLDHLDKGLVEFVPNFDESEKEPSVLPAMLPNLLINGTTGIAVGMATNMPPHNPSEVIEGVIAYIDNPDITTEGLMKYIPGPDFPTGGTIINSEDIRNIYETGEGRLKVRAKTEIEASDNGRKNIVITEIPYTVAGNKTKLVESLVDLMKDKVFDEIFDVRDESSKEGIRVVIEVKKDRDIENLLNGLYKKTSMEDTYGVNLLAVKDQQPIVFKLKNLVGEFVSFQEELYTKEYEHLLDKANKRLEIVDGLIRATDVIDLIIEILRGSSSIKQAKDCLIHGNTTEINFKTEASRKKAAKLDFTERQADAILAMPLSKLIGLEILRLHEENQSLLDSIEQYQSILGNKKELFKVIKSNLKEYKKQFNVPRHTVLANMEIAEYVEEVKVEDIYILIDKFGYTKSVDNTSISRVSEDNLKDFVHIVKMKNTDRLCLFTAQGNMYQVKAEKIPKCKIKDKGTLIHNLCKVDKEEILLYIAFEDLFESQLLFTTKNGFIKLVSGIEFETNRAMISATKLEEADHVVSVLCLSAHTISNPDSKVILLTEDSLSLGFPLTEVSELKKTSKGVKGITLEKKDKVAFATVALPETEFFEYQGKELSAKKVRNRKRAAKGQKASL
SIO_010081: CPHY_RS01585
subclass of: SO_0000673
so part of: CPHY_RS01585
location: complement(366857..369103)
location: region:366857-369103:-1
so has part: feature:366857-369103:-1:exon

WP_012198325.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:366857-369103:-1:exon

CPHY_RS01590
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01590
old locus tag: Cphy_0296
so part of: sequence
location: complement(369348..371276)
location: region:369348-371276:-1
so has part: feature:369348-371276:-1:exon
subclass of: SO_0000010

position:369348:-1
position: 369348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:371276:-1
position: 371276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369348-371276:-1:exon

CPHY_RS01590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01590
old locus tag: Cphy_0296
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005360050.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA gyrase subunit B
translation: MEQYNGSQIVVLEGLEAVRKRPGMYIGSTGTRGLHHLIWEILDNGIDEHLAGFCNQLEITLLKDGGISIADHGRGVPVDIHPTKKIPTARVVYTILHAGGKFGGSVYKVSGGLHGVGASVVNALSTRMIVEIRRDGKIYRDEYEHGGHPCVELENGMLPVVGKCNKSDTGTKVTFYPDPTIFETVEFKAETITKKLKEVAFLNKNLSIVFYDQNTGFKKTYCEEFGIKSFVSYINREASVIHEEPIYIEGKSGDIEVEVALQYTNSFSEQINAYCNRINVVDGGTLVTGFKTALTRVMNQYARELGVLKEKDENFDGKDIRNGLVTIISIKHPDPQFEGQTKTKLGNTDAKSAVEDVFSGEVTRFFDKNVEILKAILENSMRSYTARKASDKARSAVLKQLNDIDTKSKLASCSSKKPEECEVYIVEGDSAGGTVKTARNRRTQAVLPLRGKIINVEKATLEKILVNNEIKSMIASFGCGIGEDFDISKLRYDKIIILTDADVDGAHISTLLLTFFYRFMPELIMEGKIYRGLPPLYRVEYETSEGKKKKKFEYIYNDFELDKFRKNTKHKIIHIQRYKGLGEMDAEQLWETTLNPETRVLAQVSITDTVDADETTTLLMSNNVPPRRAFIMDEAKYAKLDI
SIO_010081: CPHY_RS01590
subclass of: SO_0000673
so part of: CPHY_RS01590
location: complement(369348..371276)
location: region:369348-371276:-1
so has part: feature:369348-371276:-1:exon

WP_012198326.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:369348-371276:-1:exon

CPHY_RS01595
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01595
old locus tag: Cphy_0297
so part of: sequence
location: 371870..374809
location: region:371870-374809:1
so has part: feature:371870-374809:1:exon
subclass of: SO_0000010

position:371870:1
position: 371870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374809:1
position: 374809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371870-374809:1:exon

CPHY_RS01595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01595
old locus tag: Cphy_0297
inference: COORDINATES: protein motif:HMM:NF016357.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0047355 - CDP-glycerol glycerophosphotransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CDP-glycerol glycerophosphotransferase family protein
translation: MAQCKVSIIMPVYNVSRYLRNCLDSIVAQTMEDIELIVVNDGSTDDSLSILKEYEVQYPEWMHVYTTENRGVSHARNYGIERASGEYLLFVDSDDFVEPEICEKLYEKAAQDNNDVVICRYNDVYENADSDMLTVKQGKAFEIVIGRNFNIHETKFELTHISPFPWDKLYRRTLFETIRFPEKLRFEDLAIMYCLMTKATSIGVIEDRLYNYRRASEGSFLSNFSEGTLDIVTSLRLFLKQMKEQGNYEEFKEEIEYICTRHLLVRYDAIFDTATKGKLDIKKEMIHNCVDFFHEFFPKWRENRYLLYTASGASRKKMRKYTSRGKMIRSATMCEYTPVFVTKTLRKMKKIQDKIKKKWKKFSKAKNKFRFIYNHIPGIKLLHLPNDVQYTMFYEKLGVNENDVLFESKHGDDIAGNIFMMLQAMGDDKYRDFHIMVTLKEENISAYSALLARYGIDYVDIITTDSKEYLKVLATAKYLITDTSFPPYYIKRPEQVYLNTWHGTPLKAMGRIVPKREYALGNVQRNFYLADYLLYQNKFSRDIFVEDYMLAPIFNGKVMLSGYPRNSAFFNTERYDAIRSELGVEDMQVMGYMPTWRGLLNKKENKKQVSELINYFYELDMLLRDDQVLYVKLHPFVKSEVNYDDFTHIVPFPEEYETYDFLNATDLLITDYSSIMFDYAVSKKKIILFTYDREEYLNDRGMYLDLNDLEFPIADTVEQLVKEIKKDSSYPKFHEEFCSLDSADTAEEVCETLFLKKEPSFSLEPIQRENKKKVLILISGLRNNATSEQLMERINELDTDRYDVFLCAKASTIRKATSVLSKLRDEINYIPLMFDVNYTIKDRIACLKSFKFGYSSKRTEGLIRRLAERERVKYFGAINFDIVINLSSLDQILFHMCKSFDGVKIFNMKSFEYKKYTQNKDYRKFMDYFLNRLDGYDYVTGTKQILKLNQAVFEQNQVKHLIGHESKLELPELLKEVDR
SIO_010081: CPHY_RS01595
subclass of: SO_0000673
so part of: CPHY_RS01595
location: 371870..374809
location: region:371870-374809:1
so has part: feature:371870-374809:1:exon

WP_041703068.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:371870-374809:1:exon

CPHY_RS01600
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01600
old locus tag: Cphy_0298
so part of: sequence
location: 374809..375912
location: region:374809-375912:1
so has part: feature:374809-375912:1:exon
subclass of: SO_0000010

position:375912:1
position: 375912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374809-375912:1:exon

CPHY_RS01600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01600
old locus tag: Cphy_0298
EC number: 2.4.-.-
inference: COORDINATES: protein motif:HMM:NF016145.2
GO function: GO:0016757 - glycosyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polysaccharide pyruvyl transferase family protein
translation: MKVGVVTFHSAHNYGASLQAWALQKVLKNLGTEPGVIHYHPEIIDKLYVAPKLDTTKKKLKYLLKKEYRSRIQTQVYKNKRYSKFIREKFHLIGDYKTYEELLNANLSLDAYITGSDQVWNSDHTGGFDPAYTLDFAKPGAKKISYAASVGREYILPQYREQFRQSLESYTSISVREASSKPGIEALTDKPVEVVLDPTLLLERKDYEELKKPGKFKGRYILVYMMESNKELVQFANRLSVAIGLPIIQRKLPGVFRNELGSYYEDTAAEFLGEIENAEYVLTNSFHATVFSLIYEKPFISMLHTSTGARTSDLLKSVGLESHLLYHIGDFHDMNQFDIEDVEALRQRIRELRESSIDFLKRALDKK
SIO_010081: CPHY_RS01600
subclass of: SO_0000673
so part of: CPHY_RS01600
location: 374809..375912
location: region:374809-375912:1
so has part: feature:374809-375912:1:exon

WP_012198328.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:374809-375912:1:exon

CPHY_RS01605
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01605
old locus tag: Cphy_0299
so part of: sequence
location: 375937..376965
location: region:375937-376965:1
so has part: feature:375937-376965:1:exon
subclass of: SO_0000010

position:375937:1
position: 375937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376965:1
position: 376965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375937-376965:1:exon

CPHY_RS01605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01605
old locus tag: Cphy_0299
EC number: 2.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019680162.1
GO function: GO:0016757 - glycosyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 2 protein
translation: MKRLTAVVPCFNEEEVLPMFYEEIMNVAECLKNEVEFEVLFVNDGSTDGTLQEIRKLRERDKRVKLVSFSRNFGKEAAMYAGLEHSTGDFVAILDADLQHPPKMLIEMYHGIVLEGYDSVAAKRVTRDGEPKIRSFFSKKFYNILCKLSKIEIVEGSVDYRLMTRQMVKAVLSMSERNRFTKGIFGWVGFHTKWIAYENVERAAGQTKWSFWKLFKYSLEGIIGFSTAPLAISSILGLAFCGFSVLAIIYIVIKTIIWGDPTSGWPSLACIILMVGGIQLFCMGILGQYMGKTYIEVKNRPIYLASLVETEEEQDDRMSEANQKQDEMLPETISKATNKEIT
SIO_010081: CPHY_RS01605
subclass of: SO_0000673
so part of: CPHY_RS01605
location: 375937..376965
location: region:375937-376965:1
so has part: feature:375937-376965:1:exon

WP_012198329.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:375937-376965:1:exon

CPHY_RS01610
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: tagD
locus tag: CPHY_RS01610
old locus tag: Cphy_0300
so part of: sequence
location: 377015..377401
location: region:377015-377401:1
so has part: feature:377015-377401:1:exon
subclass of: SO_0000010

position:377015:1
position: 377015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377401:1
position: 377401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377015-377401:1:exon

CPHY_RS01610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: tagD
locus tag: CPHY_RS01610
old locus tag: Cphy_0300
EC number: 2.7.7.39
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013976079.1
GO function: GO:0047348 - glycerol-3-phosphate cytidylyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycerol-3-phosphate cytidylyltransferase
translation: MKKVITYGTYDLLHVGHINLLRRAKEYGDYLIVVLSSDEFNAIKHKTAYHCYEDRKTILEAIQYVDEVIPEYNWEQKIKDVVDNNVDVFVMGDDWKGQFDFLKDYCEVVYLPRTEGISTSKIKNDLHK
SIO_010081: CPHY_RS01610
subclass of: SO_0000673
so part of: CPHY_RS01610
location: 377015..377401
location: region:377015-377401:1
so has part: feature:377015-377401:1:exon

WP_012198330.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:377015-377401:1:exon

CPHY_RS01615
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01615
old locus tag: Cphy_0301
so part of: sequence
location: 377579..378751
location: region:377579-378751:1
so has part: feature:377579-378751:1:exon
subclass of: SO_0000010

position:377579:1
position: 377579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:378751:1
position: 378751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377579-378751:1:exon

CPHY_RS01615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01615
old locus tag: Cphy_0301
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009203947.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CDP-glycerol glycerophosphotransferase family protein
translation: MLRKIMKKGILAIYRILRFLPLQKRTICFMSNLGRSYGGNPKSIYEEMVREGLDKEFRCIFFLEDTNAPIPGRVWKVKLSRFRYYYFLAVAGIWVSDTRFPNYIKKRKGVTYLQTWHGTPLKKLALDMTSLVMAGEETLEQYKEEFKKNSATWDYLISQNPFSTETFRRAFDFQGEILEYGYPRNDVLFQKNNSYDIDQIKKKLNIPRDKKIILYAPTWRDNEYHDKANYKFNAPLDYNYLYEQLKDEYVILLKYHYMVREKLPLEQYRGFYMVVEQEIDISELYLVSDMLITDYSSVMFDYSLLYRPILFYVYDLKEYEDNLRGFYFDFVEEAPGPLFTSSRELVSMVKNYYPEDYADKYKAFCDKYHTFENGNAAKRTVRLLSEKGMK
SIO_010081: CPHY_RS01615
subclass of: SO_0000673
so part of: CPHY_RS01615
location: 377579..378751
location: region:377579-378751:1
so has part: feature:377579-378751:1:exon

WP_012198331.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:377579-378751:1:exon

CPHY_RS01620
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01620
old locus tag: Cphy_0302
so part of: sequence
location: 379217..380476
location: region:379217-380476:1
so has part: feature:379217-380476:1:exon
subclass of: SO_0000010

position:379217:1
position: 379217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380476:1
position: 380476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379217-380476:1:exon

CPHY_RS01620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01620
old locus tag: Cphy_0302
EC number: 4.1.1.20
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004034001.1
GO function: GO:0008836 - diaminopimelate decarboxylase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO process: GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: diaminopimelate decarboxylase
translation: MKKPFVTLEKVNEIVNTHSTPFYIYDEKGIRENARKLKEAFSWNKGFKEYFAVKATPNPFILQILKEEGCGSDCSSETELMISEAVGITGSEIMFSSNNTPEGEFTKAKELGAIINLDDYTHIDFLKEECGIPETICCRYNPGGVYEVSNGIMDNPGDAKYGFTKQQLIDGYKKLMELGAKNFGIHSFLVSNTVTNDYYPALARTLFELAVELKNETNANITFINLSGGIGIPYLPEEKGNDIMVIGEGVRKAYEEILVPNGLGDVAIFTELGRYMLAPYAHLVTKAIHEKHIYKEYLGVDACAVNLMRPAMYGAYHHITVLGKEETPLDTMYDVVGSLCENNDKFAIDRMLPKVDMGDYLVIHDTGAHGFAMGYNYNGKLKSAELLLKEDDSVQLIRRAETPEDYFATFDFCDILKQK
SIO_010081: CPHY_RS01620
subclass of: SO_0000673
so part of: CPHY_RS01620
location: 379217..380476
location: region:379217-380476:1
so has part: feature:379217-380476:1:exon

WP_012198332.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:379217-380476:1:exon

CPHY_RS01625
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: flgM
locus tag: CPHY_RS01625
old locus tag: Cphy_0303
so part of: sequence
location: 381033..381305
location: region:381033-381305:1
so has part: feature:381033-381305:1:exon
subclass of: SO_0000010

position:381033:1
position: 381033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:381305:1
position: 381305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381033-381305:1:exon

CPHY_RS01625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: flgM
locus tag: CPHY_RS01625
old locus tag: Cphy_0303
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005601316.1
GO process: GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar biosynthesis anti-sigma factor FlgM
translation: MRIDALSKINQLYQTNDTRKVSKTQNGNKKDSVEISQMGKDFQIAKQAVSSAPDIRQEKVDEIKKKLASGNYEINLEELADKMINDFFEE
SIO_010081: CPHY_RS01625
subclass of: SO_0000673
so part of: CPHY_RS01625
location: 381033..381305
location: region:381033-381305:1
so has part: feature:381033-381305:1:exon

WP_012198333.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:381033-381305:1:exon

CPHY_RS01630
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01630
old locus tag: Cphy_0304
so part of: sequence
location: 381357..381872
location: region:381357-381872:1
so has part: feature:381357-381872:1:exon
subclass of: SO_0000010

position:381357:1
position: 381357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:381872:1
position: 381872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381357-381872:1:exon

CPHY_RS01630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01630
old locus tag: Cphy_0304
inference: COORDINATES: protein motif:HMM:NF016985.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar protein FlgN
translation: MASLIQELITTLREEEQLYQEMIPIAAKKTRVIIDNDLASLQQITEEEQVTVEKVNALERKREEVIVNIGTVINRKSDTLTMKTIITLLENQPEEQKELSLIHDSLTTTINQLVELNHKNKSLIQQSLEMIEFNMNLIQSTRMSPGSTNYTKGASQLEMPAAQTGMFDAKQ
SIO_010081: CPHY_RS01630
subclass of: SO_0000673
so part of: CPHY_RS01630
location: 381357..381872
location: region:381357-381872:1
so has part: feature:381357-381872:1:exon

WP_012198334.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:381357-381872:1:exon

CPHY_RS01635
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: flgK
locus tag: CPHY_RS01635
old locus tag: Cphy_0305
so part of: sequence
location: 381918..383780
location: region:381918-383780:1
so has part: feature:381918-383780:1:exon
subclass of: SO_0000010

position:381918:1
position: 381918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383780:1
position: 383780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381918-383780:1:exon

CPHY_RS01635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: flgK
locus tag: CPHY_RS01635
old locus tag: Cphy_0305
inference: COORDINATES: protein motif:HMM:TIGR02492.1
GO component: GO:0009424 - bacterial-type flagellum hook [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar hook-associated protein FlgK
translation: MSLMSSLYVGVSGLQVSQNGLNTTGHNLANVETEGYVRQQTVLQTSQYRTIGQSYISPMQLGLGAETAAVRQVRDIFLDKSYRQELGRRGFYDSQYETVSEIENLMGELEGVAFQDSIADFWKNLQELAKEPDSLVKRASLVETSVGFVERSENLFKQLRDYQLNLNLKITNTISRINEIGDQISSLNDRICAYESNRVEHANDLRDTRNKLLDELSQMITITYRENADGRVTVNAEGVPFVTEDLTHHMGSMTVTQIRQRQLDEDEFNSTGMMENSDMLIPIWPTYGNVEVFNRDLIPNPVDNSDIGSLKGLILARGTKVAKATDIPIAPNKDNYLDEFGDLKEDEYNLALKDYKEAVKTYNKTIEPSIVMSTQAQYDQLIHGIVTKINDILCPNKEVVIAAGTTIQLSNGDTYTYDKDTVIKIFDDENAPIGINGEGGTELFSRKSMPRYMDYQEITLANGDTILAKIYNEEDEANNYSLYTVGELVVNQEMIEDKSKIPLSQSSNTGDYDIKTTERLLKAWQEPFATLSPNTLTKSNINDYYNALIGGIATTGERYHTIVKSQEGMVTSIDNQRQSVLGVASDDELTSLIKFQHAYNAAARYINVIDQMLEHIVTRI
SIO_010081: CPHY_RS01635
subclass of: SO_0000673
so part of: CPHY_RS01635
location: 381918..383780
location: region:381918-383780:1
so has part: feature:381918-383780:1:exon

WP_012198335.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:381918-383780:1:exon

CPHY_RS01640
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: flgK
locus tag: CPHY_RS01640
old locus tag: Cphy_0306
so part of: sequence
location: 383872..385713
location: region:383872-385713:1
so has part: feature:383872-385713:1:exon
subclass of: SO_0000010

position:383872:1
position: 383872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385713:1
position: 385713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383872-385713:1:exon

CPHY_RS01640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: flgK
locus tag: CPHY_RS01640
old locus tag: Cphy_0306
inference: COORDINATES: protein motif:HMM:TIGR02492.1
GO component: GO:0009424 - bacterial-type flagellum hook [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar hook-associated protein FlgK
translation: MPSTFFGLSIGNSGLYASQAGLNTTAHNIANIETEGFSRQVAKQQAGTALRVNSSYGMVGTGVDIKGVTQIRDSYYDLKYMKNNTMYGAYSTKEYYLTSIENYFNEVKLEGFLTNFDNMYNSLQELSKQPEDLTVRTQVTNMAQSTCDYVNSLSTSLSRLQEECNFEIKNQVERVNSLAQQIAIVTKQINTIEVNGGTANDLRDQRALMVDELSGFATVSVNERIVGDNVGVTSYTVKLDGQTLVDNYEANQLKVVPRDTKVNQLDATGLFNVCWSNGQPVDLNSPTMGGTLKALIQVRDGNNKEGYQGKAIASAGDTTITVTSTNKNNVEDLNIASNGIITIGNREYHYNGFAVTKDEDTGEFIYEFSLDEPVKVDVNEETAHIGKQVDYKGIPYYMAQLNKFARTYAKAFNDVHKSGQDLNGDQGLDFFNGVDVVTGKNFIFDKSPSDEGNGYLFTSKTGAYAGDYADEPNFASYYLLTADTFGVTKAVYSDPKKLATASSIENGVANADNVQKLLALKDDVRMFGQGKPAQFFQTLVAEIGIDAKQASNFAENQMNILSAVQNQRLSISGVDQEEEAMNLVRYQKAYNLSAKVISIMDQIYDRLINYMGA
SIO_010081: CPHY_RS01640
subclass of: SO_0000673
so part of: CPHY_RS01640
location: 383872..385713
location: region:383872-385713:1
so has part: feature:383872-385713:1:exon

WP_012198336.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:383872-385713:1:exon

CPHY_RS20480
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: flgL
locus tag: CPHY_RS20480
old locus tag: Cphy_0307
so part of: sequence
location: 385783..387315
location: region:385783-387315:1
so has part: feature:385783-387315:1:exon
subclass of: SO_0000010

position:385783:1
position: 385783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387315:1
position: 387315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:385783-387315:1:exon

CPHY_RS20480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: flgL
locus tag: CPHY_RS20480
old locus tag: Cphy_0307
inference: COORDINATES: protein motif:HMM:TIGR02550.1
GO component: GO:0009424 - bacterial-type flagellum hook [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar hook-associated protein FlgL
translation: MRITNKMMTNNVLYNINNNKNSLSKTEQQYSTGKKIQRPSEDPIVAVRALKLRTNLTELNQYYEKNIPDALAWMDLTESSLSNINEILTKIHTYCVNGANDTLTEEDRNSLAVNLNQLKDQIYQEGNTNYAGRYVFSGYKTDSSLVFSENTSKYNYLLTERLSGANLDVIQKSINSFDLSSYNPNAPWDTSFDEKPNYITAHRLRLAYNNLKNLDDGQLKIEIADQDSDGNVILDGDGNRTYTEYSGIIESRLSTDEDAYTPPDGTIYFLADTGELILPEDVYQDFRDKVDIKVSYEKNSFVKNDLKPEHYFDCVQTDLTSDDLVERNFTKQNQEIRYEINFSQSMVVNTQGSDAITHNIGRTIDDIIFAVNSVIAVDKKISEVNKMLASGNITEEQKTTLNQALEVLTAEKILKDEVMQKTFGSALSGIKEQQNIINVAVSDLGSRSVRIQLTESRLSMEQVDFEDLLSKNEDADIVDTIIKMKSQESVYNASLSAAAKIVKNSLLDFL
SIO_010081: CPHY_RS20480
subclass of: SO_0000673
so part of: CPHY_RS20480
location: 385783..387315
location: region:385783-387315:1
so has part: feature:385783-387315:1:exon

WP_049762278.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:385783-387315:1:exon

CPHY_RS01650
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01650
old locus tag: Cphy_0308
so part of: sequence
location: 387427..387897
location: region:387427-387897:1
so has part: feature:387427-387897:1:exon
subclass of: SO_0000010

position:387427:1
position: 387427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387897:1
position: 387897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:387427-387897:1:exon

CPHY_RS01650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01650
old locus tag: Cphy_0308
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198338.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar assembly protein FliW
translation: MVIATKHFGEIELEEDKILTFDHGIFGFEDCKRYTILYDGEDENSSVISWLQSLDEVSLALPIIQPSHVIDQYNPVIEDELLVSLGDIKEENIVVFLTLTVPSDLTKMTTNLKAPFIINTANKKGCQVVVEDPMFVVKYPVYEKFQNRAKKEDGEC
SIO_010081: CPHY_RS01650
subclass of: SO_0000673
so part of: CPHY_RS01650
location: 387427..387897
location: region:387427-387897:1
so has part: feature:387427-387897:1:exon

WP_012198338.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:387427-387897:1:exon

CPHY_RS01655
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: csrA
locus tag: CPHY_RS01655
old locus tag: Cphy_0309
so part of: sequence
location: 387891..388109
location: region:387891-388109:1
so has part: feature:387891-388109:1:exon
subclass of: SO_0000010

position:387891:1
position: 387891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388109:1
position: 388109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:387891-388109:1:exon

CPHY_RS01655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: csrA
locus tag: CPHY_RS01655
old locus tag: Cphy_0309
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198339.1
GO function: GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0006402 - mRNA catabolic process [Evidence IEA]; GO:0006109 - regulation of carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbon storage regulator CsrA
translation: MLALSRKLNESIMLGNDIEITILEIKGDQVKIGIKAPKSVPIYRKEIYLQIQESNKEAIDGGVSLEAISKLF
SIO_010081: CPHY_RS01655
subclass of: SO_0000673
so part of: CPHY_RS01655
location: 387891..388109
location: region:387891-388109:1
so has part: feature:387891-388109:1:exon

WP_012198339.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:387891-388109:1:exon

CPHY_RS01660
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01660
old locus tag: Cphy_0310
so part of: sequence
location: 388399..388887
location: region:388399-388887:1
so has part: feature:388399-388887:1:exon
subclass of: SO_0000010

position:388399:1
position: 388399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388887:1
position: 388887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:388399-388887:1:exon

CPHY_RS01660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01660
old locus tag: Cphy_0310
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEKNETIKTYLCALIISLEKKEQVLIKLISITKKQKIALEAQPPNLEEFKLEVSNKEVLIKEINELDIQFESLFHKVKAYVPDVATDYALEIKKMQEMVPRVVELGVTLRGLEQQNKMKLELISTTRAKEVVNVKKSSKSVAECYRAIHNLKDNKTWLDQKK
SIO_010081: CPHY_RS01660
subclass of: SO_0000673
so part of: CPHY_RS01660
location: 388399..388887
location: region:388399-388887:1
so has part: feature:388399-388887:1:exon

WP_012198340.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:388399-388887:1:exon

CPHY_RS01665
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01665
old locus tag: Cphy_0311
so part of: sequence
location: 389103..389477
location: region:389103-389477:1
so has part: feature:389103-389477:1:exon
subclass of: SO_0000010

position:389103:1
position: 389103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389477:1
position: 389477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:389103-389477:1:exon

CPHY_RS01665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01665
old locus tag: Cphy_0311
inference: COORDINATES: protein motif:HMM:NF015602.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar protein FlaG
translation: MEIKSINGIANYAESPVATPTVGKTGTAAVSPIQKKAPAEAMDLPNNKQTNEQQIKSAVDKANQAMKHTQTRCEFSYHEPTKSISIKIIDEQTDEILREVPPEKVLDMIEKMWEMAGLLVDEKR
SIO_010081: CPHY_RS01665
subclass of: SO_0000673
so part of: CPHY_RS01665
location: 389103..389477
location: region:389103-389477:1
so has part: feature:389103-389477:1:exon

WP_012198341.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:389103-389477:1:exon

CPHY_RS01670
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: fliD
locus tag: CPHY_RS01670
old locus tag: Cphy_0312
so part of: sequence
location: 389492..391567
location: region:389492-391567:1
so has part: feature:389492-391567:1:exon
subclass of: SO_0000010

position:389492:1
position: 389492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391567:1
position: 391567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:389492-391567:1:exon

CPHY_RS01670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: fliD
locus tag: CPHY_RS01670
old locus tag: Cphy_0312
inference: COORDINATES: protein motif:HMM:NF018852.2
GO component: GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO process: GO:0007155 - cell adhesion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar filament capping protein FliD
translation: MPIRLSGLASNMDTDSIIKELMKAQGLKKTKVENKLTKLEWTKDIWKDMNSKIYKFYTGPLSKLKTQGSFATKKATSSNESKVTVKAGTGAATGSHNVQVNKLASAQYVTGFKLDKDKNEIEVTGKTTLEDLGFAIDDGSQSTDGSKNEIVIKINNSGKTTNLYVTAETTLNDLVNACAKAGLNASYDNTQKRLFISTKESGIDNYFEMTTDTVVVTADREEVRNLLGYHNEGTSGSARFQMDQTIDTYTELLAITDRTKEQQKAFDEAEKKLKEYTKSNTIADVQKDYDSLTSNVENIKCPGKIEEEIRDKYKDLTNPPPEETILAEINEAVDSEKSKYVKYKLDEYEKINSGELPSTVTNRFYDNQTKMLGALKSAGIKDATNKIDNNNLDDIGIGTITVTDNVCSTSISGNKVSIISSDNSEIIYNGAKLEGTSNQVTVNGVTFELHGVTGENEKVTLTVANDTDAVYDMVRNFVKGYNELLQEMNKLYNADSARGFNPLTEDEKGSMTDSQIEKWEQKIKDSLLRRDDNLSGLLSSMRSNMAGSVTVNGKNLSLSTFGIVTGVYTEKGLLHINGDGEDPIYGGYEDKLKKALEENPEDVMAVLNKLADNLYQDMSNKMKGTSLRSALTVYNDKEMAKLEKSYKKDIATLEKKLKEVENRYYKQFTAMETAMSKLNSQSGQLSSMLGL
SIO_010081: CPHY_RS01670
subclass of: SO_0000673
so part of: CPHY_RS01670
location: 389492..391567
location: region:389492-391567:1
so has part: feature:389492-391567:1:exon

WP_012198342.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:389492-391567:1:exon

CPHY_RS01675
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: fliS
locus tag: CPHY_RS01675
old locus tag: Cphy_0313
so part of: sequence
location: 391596..391976
location: region:391596-391976:1
so has part: feature:391596-391976:1:exon
subclass of: SO_0000010

position:391596:1
position: 391596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391976:1
position: 391976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391596-391976:1:exon

CPHY_RS01675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: fliS
locus tag: CPHY_RS01675
old locus tag: Cphy_0313
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015515864.1
GO component: GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar export chaperone FliS
translation: MAQNAASIYQGTKINTASPAELTLMLYEGAIKFCNKALYGLEQNDIAKVNENLLKAQKIVTELRSTLDFKHPIAREFDTVYDYINRRLVDANIKKDTEILEEALDYIRQMRDTWKEVMKKNNIYVQ
SIO_010081: CPHY_RS01675
subclass of: SO_0000673
so part of: CPHY_RS01675
location: 391596..391976
location: region:391596-391976:1
so has part: feature:391596-391976:1:exon

WP_012198343.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391596-391976:1:exon

CPHY_RS01680
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01680
old locus tag: Cphy_0314
so part of: sequence
location: 392121..392591
location: region:392121-392591:1
so has part: feature:392121-392591:1:exon
subclass of: SO_0000010

position:392121:1
position: 392121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:392591:1
position: 392591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392121-392591:1:exon

CPHY_RS01680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01680
old locus tag: Cphy_0314
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKVEILLKLKEMLNKKKECLQNILYVAKEQDEITFAKESDLEIFEKYIDEKEDLILALSKLNQEYEEFIEQMGEASSDNADSDMKQQINLINQEIISLSKEIQVLEGKSKEKFEAYVQQEREKIKNFRLNSQMASNYYKSMNVGQLEDSYFMDQRK
SIO_010081: CPHY_RS01680
subclass of: SO_0000673
so part of: CPHY_RS01680
location: 392121..392591
location: region:392121-392591:1
so has part: feature:392121-392591:1:exon

WP_012198344.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:392121-392591:1:exon

CPHY_RS01685
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01685
old locus tag: Cphy_0315
so part of: sequence
location: 392760..393596
location: region:392760-393596:1
so has part: feature:392760-393596:1:exon
subclass of: SO_0000010

position:392760:1
position: 392760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:393596:1
position: 393596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392760-393596:1:exon

CPHY_RS01685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01685
old locus tag: Cphy_0315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012720452.1
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellin
translation: MIIQHNMTSANTSRQLGITTGNLAKSSEKLSSGYRINRAGDDAAGLSISEKMRGQIRGLEQGSTNAQDGISLIQTAEGALNEVHSIVQRMRELTVQASNDTYVDEDRTSISNEMKQLSKEIDRIGTDTEFNTLKLFAADNTKYNFQVGANSDQLIEVTMKQISAAKLGIDDAKIADIVGTAGKTGTDITKLIDTVNSGLTIVSAFRSDLGAVQNRLEHTIANADNTAENLQASESRIRDTNMAKEMVKYSKDNILQQAAQSMLAQANQSTQGVLSLLR
SIO_010081: CPHY_RS01685
subclass of: SO_0000673
so part of: CPHY_RS01685
location: 392760..393596
location: region:392760-393596:1
so has part: feature:392760-393596:1:exon

WP_012198345.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:392760-393596:1:exon

CPHY_RS01690
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: fliB
locus tag: CPHY_RS01690
old locus tag: Cphy_0316
so part of: sequence
location: 393775..394935
location: region:393775-394935:1
so has part: feature:393775-394935:1:exon
subclass of: SO_0000010

position:393775:1
position: 393775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394935:1
position: 394935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:393775-394935:1:exon

CPHY_RS01690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: fliB
locus tag: CPHY_RS01690
old locus tag: Cphy_0316
EC number: 2.1.1.-
inference: COORDINATES: protein motif:HMM:NF038110.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellin lysine-N-methylase
translation: MKILKPYYYDKFTCIGNKCPNTCCKGWRITVDDATYKAYKDVEGTFGKQLIQNIDCEGKVKKFILDSDMKCPFLNDNLLCDIYINLGEEFMCRTCKVYPRVIKVHADVIEQTLTLSCPEVSRLLISSNKVIDFKLEEETHSVFKSAKTMDDALLSCLLHVRSLIIDIMQKRHIKLYYRQLLIIIIADKVQTSLNKKDYNEAEVIIQRFYHEDIINLYIEQFKNIKENKKVKFDFISKLLEQIISCFLDKDKYISQLYKKYLIDSGMTIESILGKYEEQFDQYYESHQYVYENFYVHTIFRYCLDALDDGDISKQVVLANIGYIIIHVFDIISWMDNNKELSIDNQSLIMGGFSFAFEHNPIKFNALNEFLEKNNLSSLAFQALMLT
SIO_010081: CPHY_RS01690
subclass of: SO_0000673
so part of: CPHY_RS01690
location: 393775..394935
location: region:393775-394935:1
so has part: feature:393775-394935:1:exon

WP_012198346.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:393775-394935:1:exon

CPHY_RS01695
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01695
old locus tag: Cphy_0317
so part of: sequence
location: 395189..396976
location: region:395189-396976:1
so has part: feature:395189-396976:1:exon
subclass of: SO_0000010

position:395189:1
position: 395189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:396976:1
position: 396976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395189-396976:1:exon

CPHY_RS01695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01695
old locus tag: Cphy_0317
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKIDTKTHRKWNNYSNFVKFLGCFLLLFAFSVSLIAFGKLTAYGQTGRSVTYSDITIDHTKGEIRISVQSGDTILYCDAKKLDWMEATTTVNGTNSVAVIDISWINRSKEYILGIKNKDETSDDAMVQINLRPREEGLKVGLSGTSTLIDKVVNKPLELVYPTNYTINSVCKEYGYIYFYTGNGSTARYYEEYDNIEWKNGADGVWREFKELNPAIYANKGASLYFRVKTAVEEKLTTTVDKQGVYVTKGAPAGKEVRFSYPKLANAPKVALNGGDLTVALRAGYEYRLPGGEWVNVVDAHANSLGKIDPVSLYSLYEKYNRNDNSQNKKFTFQYQEFVMQIRVAATSKKPSSKSFNLNVEAPKATETTGIDISYTLPYSKKDGISFTNSNPDSYQVALISSKFCGGVGTFDASKVDYKQVKWYTVKPGTTEKPSVVKIAGTAYTGKNEIEQPILIYRLAPINESKTQKQMIASKAIAVNLPTEVVQTVTDSVQSKVELVQGAAAEGKIEVSTTNVSVGATPKISALKKPTGITITADKVKTDGKFTISVKITSAAKVVDSYKFNVTIEGVTKEYSVTIKEKPAPTPTVTPTPTP
SIO_010081: CPHY_RS01695
subclass of: SO_0000673
so part of: CPHY_RS01695
location: 395189..396976
location: region:395189-396976:1
so has part: feature:395189-396976:1:exon

WP_012198347.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:395189-396976:1:exon

CPHY_RS01700
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01700
old locus tag: Cphy_0318
so part of: sequence
location: 397096..398499
location: region:397096-398499:1
so has part: feature:397096-398499:1:exon
subclass of: SO_0000010

position:397096:1
position: 397096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398499:1
position: 398499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397096-398499:1:exon

CPHY_RS01700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01700
old locus tag: Cphy_0318
EC number: 2.4.2.14
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006567711.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amidophosphoribosyltransferase
translation: MGGFFGVASKTDCVFDLFFGTDYHSHLGTRRGGMAVYGEDGYDRSIHNIENSPFRTKFEKDVNNLKGNIGIGCISDFEPQPLMVRSHHGTYAITTVGKINNSEELVNQIFQSGNPHFLEMSGGDINPTELVAAIINQKDHLVEGIRYAQEIIDGSMTLLIMTPKGIYAARDRMGRTPVSIGQKEGAFCASFESFAYLNLGYSEYKELGSGEIVVITPEGVQTLSEPTSDMKICTFLWVYYGYPSSSYEGVSVEQMRYRCGDLLARRDQVKPDIVAGVPDSGTAHAIGYANRSGIPFSRPFIKYTPTWPRSFMPTIQSKRDLIAKMKLIPVHDLIKDKSMLLIDDSIVRGTQLRETTEFLYQSGAKEVHIRTACPPLLYKCKYLNFSRSTSEMDLITRRVIMEAEGEHANEVLPEYANPESDRYLYMLDQIRSKLNFTSLRYQRLDDMIKSVGISPCKLCTYCWNGKE
SIO_010081: CPHY_RS01700
subclass of: SO_0000673
so part of: CPHY_RS01700
location: 397096..398499
location: region:397096-398499:1
so has part: feature:397096-398499:1:exon

WP_012198348.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:397096-398499:1:exon

CPHY_RS01705
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01705
old locus tag: Cphy_0319
so part of: sequence
location: 398551..399117
location: region:398551-399117:1
so has part: feature:398551-399117:1:exon
subclass of: SO_0000010

position:398551:1
position: 398551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399117:1
position: 399117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:398551-399117:1:exon

CPHY_RS01705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01705
old locus tag: Cphy_0319
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007884786.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycerol-3-phosphate responsive antiterminator
translation: MKHTFTKTLEDCPVIAALKDNEGLEQCLSSESSTVFILYGDILTISDIVNRVKECGKLAMVHVDLISGLSSKEISVDFIKKHTKADGIISTKPMLIKRAKELSLYTVLRFFVIDSMAYENIEKQCMNVKPDCIEILPGIMPKVIKKICNTRDIPVIAGGLISDKEDIMQALDAGAVSISTTNPKVWFM
SIO_010081: CPHY_RS01705
subclass of: SO_0000673
so part of: CPHY_RS01705
location: 398551..399117
location: region:398551-399117:1
so has part: feature:398551-399117:1:exon

WP_041703071.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:398551-399117:1:exon

CPHY_RS01715
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01715
old locus tag: Cphy_0320
so part of: sequence
location: 399661..401118
location: region:399661-401118:1
so has part: feature:399661-401118:1:exon
subclass of: SO_0000010

position:399661:1
position: 399661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401118:1
position: 401118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399661-401118:1:exon

CPHY_RS01715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01715
old locus tag: Cphy_0320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015574753.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)/FAD-dependent oxidoreductase
translation: MYDVIIIGAGVIGCAVARELSKYERKVLVVDKASDICEGTSKANSGIIHAGFDAKPGSLKAKFNVLGNQMMEELSKQLDFPFQRNGSFVLGFSEEDLIELEKLKEQGEKNGVKELEILTGEEARSLEPNLSKEVIWALYAKQGGIVCPFNLTIALAENAFMNGAQFKLNTEVLCINRISSTEEIPYDFYHIETNLGILRSRTVVNAAGVYADQFHNMVSEHKIKIIPRKGEYCLFDKSVGNYVHKTIFQLPTKMGKGVLVTPTIHGNLLVGPTAEDVFDKEDISTSLDGLNEVLNKASKSVKDLPRKQVITSFAGLRAHEESGDFIIEECEDAKGFFDVAGIESPGLTSAPAIGEYISNLIMDYLPAYLNSSFKPYRKGFISIAHASFEERKQYFQENPAYANVICRCEMVTEGEIMDAIHRPLGATTLDGIKRRTRAGSGRCQTGFCSPKIIEILARELKVDPSTITKLGDGSNFLTGFNKEEV
SIO_010081: CPHY_RS01715
subclass of: SO_0000673
so part of: CPHY_RS01715
location: 399661..401118
location: region:399661-401118:1
so has part: feature:399661-401118:1:exon

WP_012198350.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:399661-401118:1:exon

CPHY_RS01720
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01720
old locus tag: Cphy_0321
so part of: sequence
location: 401119..402381
location: region:401119-402381:1
so has part: feature:401119-402381:1:exon
subclass of: SO_0000010

position:401119:1
position: 401119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402381:1
position: 402381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401119-402381:1:exon

CPHY_RS01720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01720
old locus tag: Cphy_0321
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007884790.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-dependent oxidoreductase
translation: MNYDIVIIGGGPAGLAAALGARESGASSILIIERDKELGGILNQCIHTGFGLTTFKEELTGPEYAHRYIEQIKEKDVTVMLQSMVIEITKEKQIMVMNRERGCFMIEAKAIILAMGCRERPRGALNIPGYRPAGIYTAGTAQHYVNVEGRMPGKEVVILGSGDIGLIMARRLTLEGAKVKLVAELLPYSSGLKRNIVQCLEDYEIPLKLSHTVVAIDGKDRVKGVTLAKVDEQLQTIKGTEEYITCDTLLLSVGLIPENELSALLSATINPTTGGPIVNESLETSVDGVFACGNVLHVHDLVDNVSSEARSAGKHAVEYLNHVTEEEVEKEILVQSGEGIRYTVPNQLRFSRLDEQTMIRFRVTRPFNTAYFSVYFDDIRVDRKSKKNLTPGEMGQIIINKKEIEKYPNLNKITVKIEED
SIO_010081: CPHY_RS01720
subclass of: SO_0000673
so part of: CPHY_RS01720
location: 401119..402381
location: region:401119-402381:1
so has part: feature:401119-402381:1:exon

WP_012198351.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:401119-402381:1:exon

CPHY_RS01725
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01725
old locus tag: Cphy_0322
so part of: sequence
location: 402394..402762
location: region:402394-402762:1
so has part: feature:402394-402762:1:exon
subclass of: SO_0000010

position:402394:1
position: 402394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402762:1
position: 402762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402394-402762:1:exon

CPHY_RS01725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01725
old locus tag: Cphy_0322
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006426126.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1667 domain-containing protein
translation: METRVFTCIRCPMGCELTATINDNGVITVKGNACIRGEQYARKELTSPLRVLTTTVRVIGGTQAMVPVRTKGDIPKEKIMDGIRQLKQIQVKAPIQIGEVIVENLVNTGIAVIATKTVQKRA
SIO_010081: CPHY_RS01725
subclass of: SO_0000673
so part of: CPHY_RS01725
location: 402394..402762
location: region:402394-402762:1
so has part: feature:402394-402762:1:exon

WP_012198352.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:402394-402762:1:exon

CPHY_RS01730
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01730
old locus tag: Cphy_0323
so part of: sequence
location: 402853..403878
location: region:402853-403878:1
so has part: feature:402853-403878:1:exon
subclass of: SO_0000010

position:402853:1
position: 402853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403878:1
position: 403878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402853-403878:1:exon

CPHY_RS01730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01730
old locus tag: Cphy_0323
EC number: 2.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007889779.1
GO function: GO:0016757 - glycosyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 2 protein
translation: MITVSACLIVKNEEEVLARCLDCVQRVADEIIIVDTGSTDRTKEIASRYTDLIYDFKWVDDFSAARNFSFSKASMEYLYVADADEIIEEEQIHNFLRLKETLFPEIEIVQMYYCNQLEFNTTYNFDKEYRPKLYKRVREFRFYDPLHEAVRLEPVIYDSEIEIVHKPLSNHAPRDFTTYQKIIARGENLSDKLRSMYARELFIAGEDSDFIDAYSYFYETVLHTTLGLTELKQCQCVLARGARLQQKDQDFFKVCLKNVACSVTSSEICFELGEYYLQNGDELEAILWYYNAAFETEAELNLHYQGDYPLNKLALCYQALGNDEEALKYVNLRDEWKAEER
SIO_010081: CPHY_RS01730
subclass of: SO_0000673
so part of: CPHY_RS01730
location: 402853..403878
location: region:402853-403878:1
so has part: feature:402853-403878:1:exon

WP_012198353.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:402853-403878:1:exon

CPHY_RS01735
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01735
old locus tag: Cphy_0324
so part of: sequence
location: 404066..404515
location: region:404066-404515:1
so has part: feature:404066-404515:1:exon
subclass of: SO_0000010

position:404066:1
position: 404066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404515:1
position: 404515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404066-404515:1:exon

CPHY_RS01735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01735
old locus tag: Cphy_0324
EC number: 3.4.23.36
inference: COORDINATES: protein motif:HMM:NF013421.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: signal peptidase II
translation: MIFFIIAIAIFVLDFFIKQYIEKNKTLGKSEKIFKDRIIVTKYHNQGAFLNFMEKKREILLLLSGIMIGGITILMAIIFPQKGKRILKTGIAFLAGGAASNVYDRLKRGYVVDYFSFSFYQKVIFNISDFFIFLGSIVLAVRIIFKGLE
SIO_010081: CPHY_RS01735
subclass of: SO_0000673
so part of: CPHY_RS01735
location: 404066..404515
location: region:404066-404515:1
so has part: feature:404066-404515:1:exon

WP_012198354.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:404066-404515:1:exon

CPHY_RS01740
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01740
old locus tag: Cphy_0325
so part of: sequence
location: complement(404694..406298)
location: region:404694-406298:-1
so has part: feature:404694-406298:-1:exon
subclass of: SO_0000010

position:404694:-1
position: 404694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406298:-1
position: 406298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404694-406298:-1:exon

CPHY_RS01740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01740
old locus tag: Cphy_0325
EC number: 6.3.4.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005604391.1
GO function: GO:0003883 - CTP synthase activity [Evidence IEA]
GO process: GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CTP synthase
translation: MGVKYVFVTGGVVSGLGKGITAASLGRLLKARGYHVTMQKFDPYINIDPGTMNPIQHGEVFVTDDGAETDLDLGHYERFIDESLTKQSNVTTGKIYWTVLSRERRGDFGGGTVQVIPHITNEIKSRFYRNDGCDETQIAIIEVGGTVGDIESQPFLEAIRQFQHDVGRENAILIHVTLIPYLKASGEMKTKPTQASVKDLQGMGIQPDIIMCRTELPLETGIREKIALFCNVPRNHVLQNLDADTLYEIPLMMEEEHLADVACECLHLDCPEPDLRDWEDMVYSLKNPTRDVTVALVGKYTQLHDAYISVVESLKHGAVAHNASIQIKWIPSESVTKESVADLLQEVSGVLVPGGFGDRGIEGKILAIQYAREHKLPFLGLCLGMQLAVVEFTRHVLGFSDAHSVELSPETTHPVIHLMPEQDGIEDIGGTLRLGSYPCILDKTSKAYELYQTTTITERHRHRYEVNNYYRDELIRHGVKLSGLSPDGRIVEMIELLDHPWFLATQAHPEFKSRPNRPHPLFKGFVGAALEYSK
SIO_010081: CPHY_RS01740
subclass of: SO_0000673
so part of: CPHY_RS01740
location: complement(404694..406298)
location: region:404694-406298:-1
so has part: feature:404694-406298:-1:exon

WP_012198355.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:404694-406298:-1:exon

CPHY_RS01745
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: ftsH
locus tag: CPHY_RS01745
old locus tag: Cphy_0326
so part of: sequence
location: 406898..408943
location: region:406898-408943:1
so has part: feature:406898-408943:1:exon
subclass of: SO_0000010

position:406898:1
position: 406898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408943:1
position: 408943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406898-408943:1:exon

CPHY_RS01745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: ftsH
locus tag: CPHY_RS01745
old locus tag: Cphy_0326
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016439972.1
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO process: GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent zinc metalloprotease FtsH
translation: MDNRDKNGGDKKKNWPGKRGWIFSLVAALIMVMLFSYMTKQLERSRIEEISFNEFLAMIENNNQNKIDHIEIDYSKNQYTIYTELAKNNPREKIYVAGIPRDYPVSELLIEKGIKELPNRNDNETTIVDILLAYVLPFVLIYGVMFFLFRMISKSGGGMMGVGKSNAKVYVEKETGVTFKDVAGQEEAKESLTELVDFLHNPGKYTRIGAKLPKGALLVGPPGTGKTLLAKAVAGEAKVPFFSLSGSDFVEMFVGVGASRVRDLFKQAQTQAPCIVFIDEIDAIGKSRDSHYGGGNDEREQTLNQLLSEMDGFDTSKGIVILAATNRPEVLDKALLRPGRFDRRVIVDKPDLKGRIETLKVHAKNVLMHDSVDLEEIGLATSGAVGSDLANMINEAAILAVKEGRTVVTQNDLFESVEVVIAGKEKKDRILGPEEKKIVAYHEVGHALVTALEKNAEPVQKITIVPRTMGSLGYVMQVPEEEKYLMSKDELLARIVTLYGGRAAEELVFGSITTGASNDIEKATSLARAMVTQYGMSDRFGLIGLESVENRYLDGRAVLNCGDATAAEIDSEVMAILKKCYDRAKELLAGNRDVLDKIADFLVNKETITGKEFMKIYHEVKGIPEEEKELISSEERNKIREVSVRKQDNHESSSSIVRAAELKEKTETEEEMNSNSGNTVL
SIO_010081: CPHY_RS01745
subclass of: SO_0000673
so part of: CPHY_RS01745
location: 406898..408943
location: region:406898-408943:1
so has part: feature:406898-408943:1:exon

WP_012198356.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:406898-408943:1:exon

CPHY_RS01750
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: uvrC
locus tag: CPHY_RS01750
old locus tag: Cphy_0327
so part of: sequence
location: 409162..411048
location: region:409162-411048:1
so has part: feature:409162-411048:1:exon
subclass of: SO_0000010

position:409162:1
position: 409162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:411048:1
position: 411048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409162-411048:1:exon

CPHY_RS01750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: uvrC
locus tag: CPHY_RS01750
old locus tag: Cphy_0327
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198357.1
GO component: GO:0009380 - excinuclease repair complex [Evidence IEA]
GO function: GO:0009381 - excinuclease ABC activity [Evidence IEA]
GO process: GO:0006289 - nucleotide-excision repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: excinuclease ABC subunit UvrC
translation: MFDLDEELKKLPAKPGVYIMHNNKDEIIYVGKAISLKNRVRQYFQSSRNLSTKIQQMVSNIDHFEYIIVDSEMEALVLECNLIKEHRPKYNTMLKDDKSYPYIKVTVNEAYPRVLFARQQKKDKAKYFGPYTSLGAVKDILDLLRRLYFIRTCNRNLPKDIGLERPCLYYHIKQCKAPCQGYISEEEYRKSIDEVIEFLNGNYALVTKDLQAKMKAASENLEFEEAAGYRDLILSVEKLSQKQKASDVDGVDRDIIAFASTGDEAVAQVFFIRDGKMLGREHYHITGVANESRSSIMTNFVKQFYAGTPYIPRELLLSEPLEEEELISEWLSTKRGQKVRIHVPKKGDKERLVELAEKNASLVLQQDSDKIQREEAKTIGAVRHIADMLSLPGIYRMESFDISNTNGFESVGSMVVYENGKPKRNDYRKFKIKSVQGPDDYASMREVLTRRFSHGQKEAEELAKKNIDISHGSFTRYPDLILMDGGRGQVNIALEVMNELKLTIPVCGMVKDDNHRTRGLYFDNVEIPIDTHSEAFRLITRIQDETHRFAIEYHRSLRSKAQVHSILDDIDGVGQTRRRALMKHFASIDAIKAASMEDLMAVPSMNKLSAAKVYEFFHTSSERGTETT
SIO_010081: CPHY_RS01750
subclass of: SO_0000673
so part of: CPHY_RS01750
location: 409162..411048
location: region:409162-411048:1
so has part: feature:409162-411048:1:exon

WP_012198357.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:409162-411048:1:exon

CPHY_RS01755
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: hprK
locus tag: CPHY_RS01755
old locus tag: Cphy_0328
so part of: sequence
location: 411257..412186
location: region:411257-412186:1
so has part: feature:411257-412186:1:exon
subclass of: SO_0000010

position:411257:1
position: 411257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412186:1
position: 412186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:411257-412186:1:exon

CPHY_RS01755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: hprK
locus tag: CPHY_RS01755
old locus tag: Cphy_0328
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198358.1
GO function: GO:0016791 - phosphatase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]
GO process: GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HPr(Ser) kinase/phosphatase
translation: MYTVELGKLVEKMNLENCTPEIDISSIQITQPDVNRPALQLTGFFDYFDSDRVQIIGNVEHAYMQKMEKDHGLGIMKKLMSFKMPCIVFCRGIEVSEDFKEVAIEEGVPIFRTEKTTSSFMAEVIRWLKVELAPRISIHGVLVDVYGEGILIMGESGIGKSEAALELIKRGHRLVTDDLVEIKKVSDDTLIGTAPDITRHFIELRGIGIIDVKTLFGVESVKNTQSIDLVIKLEEWNRDKEYDRLGLEEQYIEFLGNRVVCHNIPIRPGRNLAVICESAAVNYRQKKMGYNAAQELYNRVTNNLLKKSK
SIO_010081: CPHY_RS01755
subclass of: SO_0000673
so part of: CPHY_RS01755
location: 411257..412186
location: region:411257-412186:1
so has part: feature:411257-412186:1:exon

WP_012198358.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:411257-412186:1:exon

CPHY_RS01760
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01760
old locus tag: Cphy_0329
so part of: sequence
location: 412380..413318
location: region:412380-413318:1
so has part: feature:412380-413318:1:exon
subclass of: SO_0000010

position:412380:1
position: 412380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413318:1
position: 413318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412380-413318:1:exon

CPHY_RS01760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01760
old locus tag: Cphy_0329
EC number: 2.7.1.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015533290.1
GO function: GO:0004340 - glucokinase activity [Evidence IEA]
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ROK family glucokinase
translation: MDKFCFGIDIGGTTIKCGLFTANGELKEKWEIPSRTENGGIQVPQDVADTIDAKLKELSIEKKDVLGVGIGVPGPITEDGTVLKCANLGWDIFNVNEKMSALTGLKVATANDANVAALGEMWMGGGKGYKNIVMVTLGTGVGGGVILNGKIVAGSNGGGGEIGHMTMNLDEKETCGCGKHGHLEQYASATGIVRLAKKRLLDTSVTTSLRELAEVTAKDIFDHAKAGDTVALELVEELGRYLGLALSHVAAAVDPQVFVIGGGVSRAGSMLLDVISKYYNQNIIFALSNKEFRLAELGNDAGIYGCAKLVIG
SIO_010081: CPHY_RS01760
subclass of: SO_0000673
so part of: CPHY_RS01760
location: 412380..413318
location: region:412380-413318:1
so has part: feature:412380-413318:1:exon

WP_012198359.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:412380-413318:1:exon

CPHY_RS01765
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: murB
locus tag: CPHY_RS01765
old locus tag: Cphy_0330
so part of: sequence
location: 413478..414410
location: region:413478-414410:1
so has part: feature:413478-414410:1:exon
subclass of: SO_0000010

position:413478:1
position: 413478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414410:1
position: 414410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:413478-414410:1:exon

CPHY_RS01765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: murB
locus tag: CPHY_RS01765
old locus tag: Cphy_0330
EC number: 1.3.1.98
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198360.1
GO function: GO:0071949 - FAD binding [Evidence IEA]; GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylmuramate dehydrogenase
translation: MNNVILQELKNIVSTERVTCNEPLSKHTSFKIGGPADYFVITKKIEETAAVIQCCNQHNLPLLMIGKGSNLLISDAGIRGVVLKQEDNTEGFFVTQCEEGYLVTGGAGMNLSAFAMKIANESLTGFEFAAGIPGSLGGAVYMNAGAYGGEIKDCIKSARVLTKEGQILSLNREELELSYRSSIIQKKGYYVIDATFLLQKGNQEDILRKIEELNQARKDKQPLEYPSAGSTFKRPEGYFAGKLIMDAGLRGYRVGGAMVSEKHCGFVINTGDATAKDVLQLIDDVRRIVKEKFGVTLEPEVRLIGEKVNP
SIO_010081: CPHY_RS01765
subclass of: SO_0000673
so part of: CPHY_RS01765
location: 413478..414410
location: region:413478-414410:1
so has part: feature:413478-414410:1:exon

WP_012198360.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:413478-414410:1:exon

CPHY_RS01770
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: rapZ
locus tag: CPHY_RS01770
old locus tag: Cphy_0331
so part of: sequence
location: 414452..415309
location: region:414452-415309:1
so has part: feature:414452-415309:1:exon
subclass of: SO_0000010

position:414452:1
position: 414452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415309:1
position: 415309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414452-415309:1:exon

CPHY_RS01770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: rapZ
locus tag: CPHY_RS01770
old locus tag: Cphy_0331
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007889367.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNase adapter RapZ
translation: MRFVIVTGMSGAGKSSVLKMLEDSSYFCVDNLPIPFIMKFARLAVKESANITKVALGIDIRSGQALEELGKVLEDVKSAGYQYEILFLEASTEILVKRYKETRRMHPLSGTGRVDKGIELERRKLRFLKERADYIIDTSRLLVRELKTEIDNIFVQDGTYRNFFITVLSFGFKYGLPNDADLVFDVRFLQNPYYVPKLKSKTGNEPEVRDFVLSLEQAEEFLTKLMDMLLFLIPNYIAEGKNQLVIGIGCTGGRHRSVTLANEITKRLSATEYGVKAEHRDVEKG
SIO_010081: CPHY_RS01770
subclass of: SO_0000673
so part of: CPHY_RS01770
location: 414452..415309
location: region:414452-415309:1
so has part: feature:414452-415309:1:exon

WP_041703843.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:414452-415309:1:exon

CPHY_RS01775
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: whiA
locus tag: CPHY_RS01775
old locus tag: Cphy_0332
so part of: sequence
location: 415316..416257
location: region:415316-416257:1
so has part: feature:415316-416257:1:exon
subclass of: SO_0000010

position:415316:1
position: 415316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:416257:1
position: 416257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:415316-416257:1:exon

CPHY_RS01775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: whiA
locus tag: CPHY_RS01775
old locus tag: Cphy_0332
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198362.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0043937 - regulation of sporulation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-binding protein WhiA
translation: MSFSKEVKEEITKQMNNARHCRLAEIAALLSACGHVIQKDGEIKSIVLQTENILVARKYFTLLKKTFNINTEILIRKNKAGKNSLLFLLVVKLPKQVSLLYQATKLSLHHELGDKALVVDPIVVQNTCCKRAFVRGLFLAAGSMSDPEKTYHYEIVFPDLERASQLQEIINSFLIDAKIVLRKKYYVVYVKEGSQIVDLLNIMEAHTSLMDFENVRILKEMRNSINRQVNCEAANINKTVTAAAKQIDDILFIRDTIGFDNLTEGLEEIAELRISYPESSLKELGAMLNPPIGKSGVNHRLKKLCSIADGLRQ
SIO_010081: CPHY_RS01775
subclass of: SO_0000673
so part of: CPHY_RS01775
location: 415316..416257
location: region:415316-416257:1
so has part: feature:415316-416257:1:exon

WP_012198362.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:415316-416257:1:exon

CPHY_RS01780
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01780
old locus tag: Cphy_0333
so part of: sequence
location: 416274..416531
location: region:416274-416531:1
so has part: feature:416274-416531:1:exon
subclass of: SO_0000010

position:416274:1
position: 416274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:416531:1
position: 416531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416274-416531:1:exon

CPHY_RS01780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01780
old locus tag: Cphy_0333
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018597868.1
GO process: GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HPr family phosphocarrier protein
translation: MISKKIVIKIPTGLEARPVALLVQVASQYESNVYVECEEKKVNAKSIMGMMSLGLPAGEEINVIVDGSDEEVAMENIEKYLCGNK
SIO_010081: CPHY_RS01780
subclass of: SO_0000673
so part of: CPHY_RS01780
location: 416274..416531
location: region:416274-416531:1
so has part: feature:416274-416531:1:exon

WP_012198363.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:416274-416531:1:exon

CPHY_RS01785
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01785
old locus tag: Cphy_0334
so part of: sequence
location: 416855..418246
location: region:416855-418246:1
so has part: feature:416855-418246:1:exon
subclass of: SO_0000010

position:416855:1
position: 416855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:418246:1
position: 418246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416855-418246:1:exon

CPHY_RS01785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01785
old locus tag: Cphy_0334
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDNQKKPKDGKITLRKVTKILIMEGLILSVLFISFAMKRLSDNKVDPVETTKPVVQTSNNNITITPTADPMREVKKEQEAKQQEVLKEAKLLAAGYDYDKAINMLKSEKGYENVDSYMVAINEFEEEKKSLVPLGAYKSSEEVSHLFFHSLIYDTSKAFDGDYKENGYNYYMVTVKEFKEMLRQLYENNYVLVSVHDLVTKVTKKDGTTTYQDGEILLPPNKKPFVLSQDDVNYYDYMDGDGFASRMVIDENGKPSTLMINEDGTTTVGDYDMVPIVERFIEEHPDFSYRGARGIIALTGYEGALGYRTDPASKNSKTYAQDKETVKQVAEVMKQYGWEFASHSNGHRDMGACTEEFLKKDTDKWLKYVGSLVGETDLYIFPYGIDIQSGAGTYKNAKFQYLDSVGFHYYFGVFKEPWIQVKDNYVRMSRRAIDGQAMLQYPERLKDIFDLSTILDDVRPALK
SIO_010081: CPHY_RS01785
subclass of: SO_0000673
so part of: CPHY_RS01785
location: 416855..418246
location: region:416855-418246:1
so has part: feature:416855-418246:1:exon

WP_012198364.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:416855-418246:1:exon

CPHY_RS01790
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01790
old locus tag: Cphy_0335
so part of: sequence
location: 418448..422008
location: region:418448-422008:1
so has part: feature:418448-422008:1:exon
subclass of: SO_0000010

position:418448:1
position: 418448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422008:1
position: 422008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:418448-422008:1:exon

CPHY_RS01790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01790
old locus tag: Cphy_0335
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004607846.1
GO function: GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit alpha
translation: MSFTHLHVHTEFSLLDGSGKIKEMAAQAKKLGMDALAITDHGVMYGVIDFYRACLAEGIKPIIGCEVYVAPNSRFDKEGSASEERYHHLVLLAENDIGYHNLIKIVSRGFTEGFYYKPRVDHELLKEYSEGIIALSACLAGEVAVMLRRNFFEEAKASALKLQEIFGAGNFFLELQDHGYPEQKSVNQGLLRISEETNIPLVATNDIHYTYDTDETAHDILLCIQTQKKVTDEDRMRYAGGQFYMKSPEEMRELFPYALQALQNTEEIAKRCNVTIEFGHYKLPKYDVPAPYTVSPGSGSTDDEGDISASQNISTNTDILAREYLRKLCEEGLVRRYKDPSTELWDRLNYELETIENMGFVDYFLIVWDFIKYAKDNDIIVGPGRGSAAGSVVSYCLEITNIDPIKYSLLFERFLNPERLTMPDIDIDFCFERRQEVIDYVVSKYGKDRVVQIVTFGTMAARAVIRDVGRALDMPYASVDVVAKMIPTELGITIEKALNINPDLKKLYESDPEVMHLIDMSKRLEGLPRHTSMHAAGVVISNAPADEYVPLSRSSDDSITTQFTMTTLEELGLLKMDFLGLRTLTVIQNAVLLVNQAKARLGETEENFLNIDEIDYNDSKVLDLISSAKTEGIFQLESSGMKSFMKELKPQNLEDIIAGISLYRPGPMDFIPKYIQGKNNQKSIQYECKELEPILSPTYGCIVYQEQVMQIVRELAGYSFGRSDLVRRAMSKKKASVMEKERQSFVYGNVEEGVPGCISKGIPEAVANHIYDEMTDFAKYAFNKSHAAAYAVVSYQTAYLKCYYPVEFMAALMTSVIDNPSKVAEYIYTCRQMGIKLLPPDINDGYATFTVSGENIRYGLSAIKGLGRPVIDALVIEREENGPYLNLKDFASRLSGKEVNKRTIESFIKSGAFDSMPGTRKQLMHVYVGVLDGVSQEKKRAMTGQMSLFDLDGDAKVMNEEIIFPEVGEYSKEELLAFEKEVLGIYVSGHPLEAYELLLKRNATANTADFIVEEETNTVKVADGDTVTVGGMITSRTLKTTRTNAVMAFITLEDMFGTMEVIIFPRDYEKFKYTLEIDNRVFIKGKVAVEEDKPAKLICQSITPFADISKELWVKFSDKEAFLNNEKALYEIIKNYDGNDRITVYCEKEKAIKKLPLSQSVIIEEGLLENLRNAFSEENIKVVEKL
SIO_010081: CPHY_RS01790
subclass of: SO_0000673
so part of: CPHY_RS01790
location: 418448..422008
location: region:418448-422008:1
so has part: feature:418448-422008:1:exon

WP_012198365.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:418448-422008:1:exon

CPHY_RS01795
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: pfkA
locus tag: CPHY_RS01795
old locus tag: Cphy_0336
so part of: sequence
location: 422420..423424
location: region:422420-423424:1
so has part: feature:422420-423424:1:exon
subclass of: SO_0000010

position:422420:1
position: 422420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:423424:1
position: 423424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422420-423424:1:exon

CPHY_RS01795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: pfkA
locus tag: CPHY_RS01795
old locus tag: Cphy_0336
EC number: 2.7.1.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008707802.1
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 6-phosphofructokinase
translation: MFEQLGASNEITSNVKTIGILTSGGDAPGMNAAIRAVVRTALANGLEVKGIRRGFTGLLEEDIIDLNANSVSDIIQRGGTILYTARCPEFVTKEGQDKGAEVCRKHGIDGLVVIGGDGSFQGAKQLAARGINTVGLPGTIDLDIACTDYTIGFDTAVNTAMESIDKVRDTSTSHERCSIIEVMGRNAGYIALWCGIANGAEDVLTTERYDHDEQRIISNIIEKRKIGKKHHIIVNAEGIGDSYGMAKRIEAATGMETRATIIGHIQRGGSPTCKDRVYASAMGAKAVDILCRGGSNRVVAYKHGEFVDFDINEALAMKKDLDEYLFQMSKKLSR
SIO_010081: CPHY_RS01795
subclass of: SO_0000673
so part of: CPHY_RS01795
location: 422420..423424
location: region:422420-423424:1
so has part: feature:422420-423424:1:exon

WP_049762450.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:422420-423424:1:exon

CPHY_RS01800
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01800
old locus tag: Cphy_0337
so part of: sequence
location: 423685..425433
location: region:423685-425433:1
so has part: feature:423685-425433:1:exon
subclass of: SO_0000010

position:423685:1
position: 423685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425433:1
position: 425433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423685-425433:1:exon

CPHY_RS01800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01800
old locus tag: Cphy_0337
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014079498.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MNPRAKKFLSYYKPYWKLFLADMLCALTAAGISLVYPLIVRYITQDVLVNNEINQAIQIIIRMAAVLIGLAILEFGCNFFIAYKGHIMGAKMEYDMRNEIFGHFQKLSFNFYDNQKTGQLMTRITNDLFDITELCHHGPEDIVISIIKFVGAFIILVRINWKLTIILFLFIPMMFIFAYIMKGRMNRAFRKNRERIADINAQIEDNLSGIRVVKSFANEDCETSKFDAGNKRFVDSKSHAYWQMATFHSGLSFFTNLINVAVIVGGGILIALSGILLSDMLTFMLYVNNIIEPIRKLINFTEQFQNGVTGFSRFMEIIETNPDIVDSPDAKELKNVRGDISFEEVSFKYQDTTSEVFRNINLQVPAGEYIALVGSSGVGKTTMCSLIPRFYEVSTGRITIDGQDIRSLTQKSLRKNIGIVQQDVYLFAGTVADNIRYGDLDATMEEVIEAAKNANAHEFIMNLPEGYNTYIGQRGVKLSGGQKQRLSIARVFLKNPPILIFDEATSALDNESEKIVQESLEKLAKNRTTFVIAHRLTTIKNARNIIVLTEEGIKEQGTHEKLLSLDGIYASLYHLNYEKQQA
SIO_010081: CPHY_RS01800
subclass of: SO_0000673
so part of: CPHY_RS01800
location: 423685..425433
location: region:423685-425433:1
so has part: feature:423685-425433:1:exon

WP_012198367.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:423685-425433:1:exon

CPHY_RS01805
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01805
old locus tag: Cphy_0338
so part of: sequence
location: 425701..427869
location: region:425701-427869:1
so has part: feature:425701-427869:1:exon
subclass of: SO_0000010

position:425701:1
position: 425701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:427869:1
position: 427869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425701-427869:1:exon

CPHY_RS01805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01805
old locus tag: Cphy_0338
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016287972.1
GO component: GO:0005829 - cytosol [Evidence IEA]
GO function: GO:0003729 - mRNA binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tex family protein
translation: MKIFEQLKEELGIKLEQVEATVKLIDEGNTIPFIARYRKEVTGSLNDEVLRSLSERLTYLRNLEEKKASVLASIEEQGKLTEELKAQIEAAATLVVVEDLYRPYRPKRRTRATIAKEKGLEPLAEIIIAQEISRDILELAEDYVSEEKEVSSAKDAVAGALDIIAESISDEADYRIHIRKLTFEEGSITSAAKDAEAESVYELYYEYSEKISKVAGHRVLALNRGENEKFLTVKITAPTEKIMNYLKGKVIKRDNPHTNDYLVVAIADSYDRLIAPAIEREIRNDLTEKAEDGAIVVFGQNLTQVLMQPPIAGQVVLGWDPAFRTGCKLAVVDATGKVLDTVVIYPTAPQNKVEEAKTVLKKLFKKYQITLISVGNGTASRESEQIIVDLLKEITEPISYVIVNEAGASVYSASKLATEEFPNFDVGQRSAASIARRIQDPLAELVKIDPKSIGVGQYQHDMNQKKLSEALGGVVEDCVNKVGVDLNTASASLLEYISGISKPIAKNIVIYREENGKFKNRKQLLKVAKLGPKAFEQCAGFLRINDGDNPLDGTSVHPESYEAAEKLLEMLEVKDLRELQAKAKEVDAKREQSISQKVKDKKKMAQELSIGEITLTDIIKELEKPSRDPREEMPKPILRTDVLDMKDLTEGMILKGTVRNVIDFGAFVDIGVHQDGLVHISQLSKQKFVKHPLDIVSVGDIVEVKVLSVDVSKKRIQLSMIL
SIO_010081: CPHY_RS01805
subclass of: SO_0000673
so part of: CPHY_RS01805
location: 425701..427869
location: region:425701-427869:1
so has part: feature:425701-427869:1:exon

WP_012198368.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:425701-427869:1:exon

CPHY_RS01810
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01810
old locus tag: Cphy_0339
so part of: sequence
location: 428277..429278
location: region:428277-429278:1
so has part: feature:428277-429278:1:exon
subclass of: SO_0000010

position:428277:1
position: 428277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429278:1
position: 429278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428277-429278:1:exon

CPHY_RS01810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01810
old locus tag: Cphy_0339
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004843667.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease subunit
translation: MESTKQDAVAIVNTSKQRFRRHKKKKEIEYEEKIPFFKYFKRHYILYLMVLPGIIYFIVFRYVPMLFNIIAFQNYSPYKGIAGSDWVGWMHFKNFFAGKDFAMLLTNTLAISFMNLFIFFPMPIILALLLNEIKHNGYKNIVQTCVYIPHFISLVVVYSLTYLILNESNGVINQLIQAMTGHTVDFLSSKPWFRPILLLQTVWKETGYGTIIFLAALAGVDVQLYEAAEVDGAGRWKKMWHITLPAIKATIITMLILRVGSILNTGYEQIFLLQNSLNRSVSEVFDTYVYKQGITQGSFSYATAVGLFKGIVGTVMVLTVNKIAKKSGEDGLY
SIO_010081: CPHY_RS01810
subclass of: SO_0000673
so part of: CPHY_RS01810
location: 428277..429278
location: region:428277-429278:1
so has part: feature:428277-429278:1:exon

WP_012198369.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:428277-429278:1:exon

CPHY_RS01815
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01815
old locus tag: Cphy_0340
so part of: sequence
location: 429392..430300
location: region:429392-430300:1
so has part: feature:429392-430300:1:exon
subclass of: SO_0000010

position:429392:1
position: 429392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:430300:1
position: 430300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429392-430300:1:exon

CPHY_RS01815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01815
old locus tag: Cphy_0340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002601487.1
GO process: GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbohydrate ABC transporter permease
translation: MKIFTYKRKGIKGRLSTRVVTGIIYSFCGLCALITLLPFLYIVAGSFATEKELIERAFFLIPSQISWNAYHYIIKTGAIILGIKNSLYLTTVGTIMNMILMTLFAYPLSRRGFRGKNLILNMVILTMLLPVGMIPMFMLIRGIGWYDSYLALTIPGAINAFNMIIIKKFFQGLSLELEDAARIDGASDWKIFRKVALPLSKPVLASITLFTAVGYWNNYFGPMIYLNSQKKYTAQLFLRQIVMTSQGISKDGSLIDWGDFGAPPTVAIRMAATVITTVPILMVYPFVQKHFAKGVMVGSVKG
SIO_010081: CPHY_RS01815
subclass of: SO_0000673
so part of: CPHY_RS01815
location: 429392..430300
location: region:429392-430300:1
so has part: feature:429392-430300:1:exon

WP_012198370.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:429392-430300:1:exon

CPHY_RS01820
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01820
old locus tag: Cphy_0341
so part of: sequence
location: 430405..432018
location: region:430405-432018:1
so has part: feature:430405-432018:1:exon
subclass of: SO_0000010

position:430405:1
position: 430405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:432018:1
position: 432018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:430405-432018:1:exon

CPHY_RS01820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01820
old locus tag: Cphy_0341
inference: COORDINATES: protein motif:HMM:NF013697.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: extracellular solute-binding protein
translation: MRKKKLLSMLLAAALVVTSLAGCSAKEEKTGGQGNVATQPPKGNENAGVSNTPKERPKVSIMSFDYSGQAMMGPNAEQVIKVLEDYTETNLEFQFVPSDAYEDKLSLTLASGSDMPMIIACGSFNANIVNNARAGAFWDLNDFIYDEAKYPNLSKANKNISNMVSVDGSLYGIYRARTLGRNGFGYRKDWADKLGLKEPETIDDVYNMLYQFTYGDPDGNGKKDTYGLNLCKYTGPLDIMQTWFGCGNGWVDQNGSLVPVHQTPEYEEALDWFKKLYDDGLIAKDWAVRETGTWTDDNKNGISGMYIDTIDNARKVWDYYVNNNIPSVLNDGTIATFAMGGGIAKTAGGQKHTLATAGYNGFFVLTKGGCKTEADVEAALHFLDKMNDDEMQILSSYGLKDIHYSLDENNVFTDIKGDNKDTLLLDYEALNQTVAYIPTNTITGIKIPTTERQDIQAELYIQNEKNVVFNPAAALIINSETYTLNGANLDQIINDARTQYIVGEINKDGLKAAWNLWASTGGSDVIKEVNDAYAKTK
SIO_010081: CPHY_RS01820
subclass of: SO_0000673
so part of: CPHY_RS01820
location: 430405..432018
location: region:430405-432018:1
so has part: feature:430405-432018:1:exon

WP_012198371.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:430405-432018:1:exon

CPHY_RS01825
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01825
old locus tag: Cphy_0342
so part of: sequence
location: 432371..434707
location: region:432371-434707:1
so has part: feature:432371-434707:1:exon
subclass of: SO_0000010

position:432371:1
position: 432371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434707:1
position: 434707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:432371-434707:1:exon

CPHY_RS01825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01825
old locus tag: Cphy_0342
inference: COORDINATES: protein motif:HMM:NF024242.2
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MEEKQGSINYKKQIFIIIMTGALLPVILLALYFYYTYIHEVSDKIDLSNAKALEQVRNKVENVTETMQLNYMSSLWKGDYVVKEDSIDWFMKNIVSYSDYSNLKKVQDELLGATYLRIYINSFYFINFSTGWVLTSNGMYPLNEVVNQEQLYDLFYTGMSDCKWTYLSIENEGKGNRVIKSDYITLAIKAPLNLKSPNCLLLVNLSSVGFERLLRNSLSSGKLTVFDAQGKLLFTEHKEVSEFLDEYIKEHNTTIESLVERRDELSKKSGFNLNFSYSGANGWLYVSSYDPAIVTREASSIIITAGLLILFMMTLIFLFSVVGSRTIYRPVSQLVTNLRNIEEIEEVAGQKENEFKFIGKRINRLVDSKNDMKELIQVQQKQLKELFVLRLLKGEVREENIESNLKNFGFEKMRYISMITISVSSKVIEEDWDYTKQDMIKISIVENMPEFISDQLLFPTVTNSNVILCTITRELKEELEAASIELIRHLTDYIVMESGYHANFGISQPFDSLMKFRQAYNESLEAVKNNETLNRENTICEQQNFIFYSDIANSNSNNYTYELILEKEMKAAVDECDKEKAFLLADTFINHMAESGAVLNELHFYLHRFMVAVILVATDAGISVNDILGHGSVNVFLQFNQLSDLDKIRSFYKHNIISPVIKQLSTFRRSNSDLVLDKIVKLVRETSSDITLTECADQLGYHPSYIWKIMKSKINMTFTDYVTIQRLEIAKKMLLETDKSVAEIAEQLKYTNAQNFIRFFSKHVGTTPGKFRLMDRNS
SIO_010081: CPHY_RS01825
subclass of: SO_0000673
so part of: CPHY_RS01825
location: 432371..434707
location: region:432371-434707:1
so has part: feature:432371-434707:1:exon

WP_012198372.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:432371-434707:1:exon

CPHY_RS01830
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01830
old locus tag: Cphy_0343
so part of: sequence
location: 434803..437214
location: region:434803-437214:1
so has part: feature:434803-437214:1:exon
subclass of: SO_0000010

position:434803:1
position: 434803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437214:1
position: 437214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:434803-437214:1:exon

CPHY_RS01830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01830
old locus tag: Cphy_0343
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009250824.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rhamnogalacturonan lyase
translation: MTGLRIKDFDKEHVTIQWDGDPYANSYRIYWADKDTKGMKYKRLSETKETEYTLERSTHVAHYLKVASISGDQEVSISSVLKTPIGKTFHEQLEKLSRGLVVVKRQKGIFLAWRLMKNEVSGFCSTGLTGADFLVYKNGELLTTVTDSTNFVDEKGTSEDKYSIGVLENGVEVERTKEMSAFRSGANYIDLPLQKPSDGTTPAGEVFSYHANDMSIGDVDGDGEYEYFVKWDPSNSKDVSQKGYTGNCYIDCYKLEGRLLWRLDMGVNIRAGAHYTQFMVYDFNGDGKVEMAVKTAPGTKMIYFDEQGNVEKEIYITMPGCDIDSGYSNRDDYRLSAEGYYKHLVTVFMNWHNHPMVIEKTWPQTLEECFGIEKKYQYPLIREDAMKLVDYFLDVYALSRSERNDLRHFEGFIIDGPEYLTMFSGLGEELETIPFPYPREDDGLVWGDYSMRRIEPANRVDRFLSGVAYLDGERPYLIVCRGYYTRATIVAYDFFENRFREYFNVDSGHVRMNNPFMDNAHGGGGSDPVYGRLAGQGNHSLSTADVDGDGYQEIIYGAAVIDHDGSLLYSSFGYLPDGTYTKLGHGDAMHVADIDPDRPGLEIFQVFEGAKHAPFGYALRDAETGEVIFGEYAETDLGRCMVGDVNPKVRGLQTWVTKMQSVKGEVLPDKLLGTNFSIRWLPDMSTQIIDGVDLFGNHAGVINDNTHGIIFIPEGVATNNGTKGNPCLVADIFGDWREELLLRTSDSSAIRIFVNTDLTNHKLYTLMHDIQYRTGITWQNNCYNQPCYPKFYFASDTDWEYVL
SIO_010081: CPHY_RS01830
subclass of: SO_0000673
so part of: CPHY_RS01830
location: 434803..437214
location: region:434803-437214:1
so has part: feature:434803-437214:1:exon

WP_012198373.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:434803-437214:1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 357809
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00050
inference: COORDINATES: profile:INFERNAL:1.1.4
note: FMN riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: flavin mononucleotide
so part of: sequence
location: 437445..437582
location: region:437445-437582:1
so has part: feature:437445-437582:1:region

position:437445:1
position: 437445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437582:1
position: 437582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437445-437582:1:region

CPHY_RS01835
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01835
old locus tag: Cphy_0344
so part of: sequence
location: 437841..438587
location: region:437841-438587:1
so has part: feature:437841-438587:1:exon
subclass of: SO_0000010

position:437841:1
position: 437841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438587:1
position: 438587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437841-438587:1:exon

CPHY_RS01835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01835
old locus tag: Cphy_0344
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009255134.1
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ECF transporter S component
translation: MENLEKLMEVAKTNVGFLLLSVTIVAIIVGAAYAAERVIRKKIGLDKRRGKQSVRSMVIIAVLSTIAVVLMLFEFPLWFAPGFYKLDFSELPVVIGAFTLGPVAGITIELIKIVLNLLLNGTTTAFVGEFANFLMGCVFIIPASFFYFLRKSKKNAVIGLLVGTVIATLTGCFLNAFVLLPKYSEAFHIPIEAFIAQGTEKISAIKGMFTFVVLAVAPFNLLKYALVSLITILIYKNISKILKGDYKD
SIO_010081: CPHY_RS01835
subclass of: SO_0000673
so part of: CPHY_RS01835
location: 437841..438587
location: region:437841-438587:1
so has part: feature:437841-438587:1:exon

WP_012198374.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:437841-438587:1:exon

CPHY_RS01840
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01840
old locus tag: Cphy_0345
so part of: sequence
location: 438772..439278
location: region:438772-439278:1
so has part: feature:438772-439278:1:exon
subclass of: SO_0000010

position:438772:1
position: 438772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439278:1
position: 439278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438772-439278:1:exon

CPHY_RS01840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01840
old locus tag: Cphy_0345
inference: COORDINATES: protein motif:HMM:NF025675.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YcxB family protein
translation: MEKEIMFQYQTKVSDMYRFLMHHAYIGVSGIVNLVISVGALVLLFAGAGGGQAFSNLMLILIASLFTIINPILLYYKAAKQVKLTPMFQKPIDYFINEEGILVSQGEEKLLINWTDIWKAVETKHAFYFYLSTRGAYILPKAALLEYVEALKKLVIEHAPEARKKFKK
SIO_010081: CPHY_RS01840
subclass of: SO_0000673
so part of: CPHY_RS01840
location: 438772..439278
location: region:438772-439278:1
so has part: feature:438772-439278:1:exon

WP_012198375.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:438772-439278:1:exon

CPHY_RS01845
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: tsaE
locus tag: CPHY_RS01845
old locus tag: Cphy_0346
so part of: sequence
location: 439293..439724
location: region:439293-439724:1
so has part: feature:439293-439724:1:exon
subclass of: SO_0000010

position:439293:1
position: 439293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439724:1
position: 439724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439293-439724:1:exon

CPHY_RS01845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: tsaE
locus tag: CPHY_RS01845
old locus tag: Cphy_0346
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005347619.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
translation: MKYESYTEGDTYRLGKQMGENAQKGQVYCLSGELGVGKTVFTKGFAAGLGIAEPISSPTFTIVQEYEQGELPLYHFDVYRIEDIEEMEEIGYEDYFYGDGVCLVEWAVRIKELLPEDYIQITIEKDLDKGFDYRVISVEENQI
SIO_010081: CPHY_RS01845
subclass of: SO_0000673
so part of: CPHY_RS01845
location: 439293..439724
location: region:439293-439724:1
so has part: feature:439293-439724:1:exon

WP_012198376.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:439293-439724:1:exon

CPHY_RS01850
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: tsaB
locus tag: CPHY_RS01850
old locus tag: Cphy_0347
so part of: sequence
location: 439847..440572
location: region:439847-440572:1
so has part: feature:439847-440572:1:exon
subclass of: SO_0000010

position:439847:1
position: 439847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440572:1
position: 440572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439847-440572:1:exon

CPHY_RS01850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: tsaB
locus tag: CPHY_RS01850
old locus tag: Cphy_0347
EC number: 2.3.1.234
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015525921.1
GO function: GO:0003725 - double-stranded RNA binding [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
translation: MKILVLDSSGLVASVAIMTEDTLLAEYTVNYKKTHSQTLLPMLDECVKMLGLELSEIDAIAVAKGPGSFTGLRIGSATAKGLGLALDKPIIAIPTVDALAYNLFATEAIICPLMDARRNQVYTGLYSFEKNEFHVIKEQTACDIEEIIDQINEYQRPVIYLGDGVEAYQKQLIESTKVPYYFAPAHLSKQRAGALGALAFHYIKEGKLESAMDHIPTYLRKSQAEREREEALSKGEQVDNS
SIO_010081: CPHY_RS01850
subclass of: SO_0000673
so part of: CPHY_RS01850
location: 439847..440572
location: region:439847-440572:1
so has part: feature:439847-440572:1:exon

WP_012198377.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:439847-440572:1:exon

CPHY_RS01855
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: rimI
locus tag: CPHY_RS01855
old locus tag: Cphy_0348
so part of: sequence
location: 440559..440993
location: region:440559-440993:1
so has part: feature:440559-440993:1:exon
subclass of: SO_0000010

position:440559:1
position: 440559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440993:1
position: 440993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440559-440993:1:exon

CPHY_RS01855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: rimI
locus tag: CPHY_RS01855
old locus tag: Cphy_0348
EC number: 2.3.1.266
inference: COORDINATES: protein motif:HMM:TIGR01575.1
GO function: GO:0008999 - peptide-alanine-alpha-N-acetyltransferase activity [Evidence IEA]
GO process: GO:0036211 - protein modification process [Evidence IEA]; GO:0042254 - ribosome biogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosomal protein S18-alanine N-acetyltransferase
translation: MIIRKMLPNDSKAMAIIEQETFSDPWSEESFLKEATEKDHIYLVVEDSGNLIAYCGMWNITGEGYITNVCVKKEKRKQGIGKLMLVSLLEQAKLCNIEAVTLEVRESNQSAIHLYEQLGFQSVGKRKDFYAHPTEDAIIMWLNF
SIO_010081: CPHY_RS01855
subclass of: SO_0000673
so part of: CPHY_RS01855
location: 440559..440993
location: region:440559-440993:1
so has part: feature:440559-440993:1:exon

WP_012198378.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:440559-440993:1:exon

CPHY_RS01860
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01860
old locus tag: Cphy_0349
so part of: sequence
location: 441107..441349
location: region:441107-441349:1
so has part: feature:441107-441349:1:exon
subclass of: SO_0000010

position:441107:1
position: 441107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441349:1
position: 441349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441107-441349:1:exon

CPHY_RS01860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01860
old locus tag: Cphy_0349
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009462523.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAHLIKERKKNDLLCNVCGRALRMEKGMLLEDAFVVSKEWGFFSSRDLEVHRFTICENCYDQLIAQFKIPIEVFDKSEAL
SIO_010081: CPHY_RS01860
subclass of: SO_0000673
so part of: CPHY_RS01860
location: 441107..441349
location: region:441107-441349:1
so has part: feature:441107-441349:1:exon

WP_012198379.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:441107-441349:1:exon

CPHY_RS01865
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01865
old locus tag: Cphy_0350
so part of: sequence
location: 441620..442534
location: region:441620-442534:1
so has part: feature:441620-442534:1:exon
subclass of: SO_0000010

position:441620:1
position: 441620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442534:1
position: 442534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441620-442534:1:exon

CPHY_RS01865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01865
old locus tag: Cphy_0350
EC number: 3.1.26.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198380.1
GO function: GO:0016891 - endoribonuclease activity, producing 5'-phosphomonoesters [Evidence IEA]
GO process: GO:0042779 - tRNA 3'-trailer cleavage [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease Z
translation: MLDVCLLGTSGMMPLPGRWLTALMTRLNGSSLLIDCGEGTQIAIREKGWSFHSIDIICFTHYHGDHISGLPGLLLSMGNADRTQPVTVIGPKGLERVVSALRVIAPELPFELNFIEVTNPQETICVNDYVINAFRVNHNVICYGYTIEVKRTGRFIPEMAMQNEVPIELWSRLQKGQTIEKDSRVFTPDMILGPQRKGIKLTYCTDSRPVPQIIEQAQGSDLFICEGMYGEKEKQSNAIENKHMTFYEAAELAKQAGVKELWLTHYSPSLTRPEEYMKETKEIFPNAKAGKDRKSITLEFDKNE
SIO_010081: CPHY_RS01865
subclass of: SO_0000673
so part of: CPHY_RS01865
location: 441620..442534
location: region:441620-442534:1
so has part: feature:441620-442534:1:exon

WP_012198380.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:441620-442534:1:exon

CPHY_RS01870
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01870
old locus tag: Cphy_0351
so part of: sequence
location: 442695..443312
location: region:442695-443312:1
so has part: feature:442695-443312:1:exon
subclass of: SO_0000010

position:442695:1
position: 442695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443312:1
position: 443312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442695-443312:1:exon

CPHY_RS01870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01870
old locus tag: Cphy_0351
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGKGSDFMKGSKKSSKNNTVMSVITMIFIGCVIVGSFAYLYNREKKDKPDIELTEVQKLLVMDLERTYPATPREVVKLYSRFSMCIHNDDLTDEEFKKLGEKVQNLYAKELIEENPSDEYLMNLAVEVAEYHKSERKIKSYTIDSGNSIVTWKEDGKEFARLLATYSLREGKEFNTVHQEFLLQKDEAGLYKILGWRLAEKADAN
SIO_010081: CPHY_RS01870
subclass of: SO_0000673
so part of: CPHY_RS01870
location: 442695..443312
location: region:442695-443312:1
so has part: feature:442695-443312:1:exon

WP_041703077.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:442695-443312:1:exon

CPHY_RS01875
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: tsaD
locus tag: CPHY_RS01875
old locus tag: Cphy_0352
so part of: sequence
location: 443503..444552
location: region:443503-444552:1
so has part: feature:443503-444552:1:exon
subclass of: SO_0000010

position:443503:1
position: 443503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444552:1
position: 444552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:443503-444552:1:exon

CPHY_RS01875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: tsaD
locus tag: CPHY_RS01875
old locus tag: Cphy_0352
EC number: 2.3.1.234
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009462521.1
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
translation: MEDYRKDVVEKEDVYILAIESSCDETAASVVKNGREVLSNVISTQIDLHTLYGGVVPEIASRKHMEKINQVIEEALSQAQMGLTDMNAVAVTYGPGLVGALLVGVAEAKAISYAAKLPLIGVHHIEGHVSANYIENKELEPPFLCLIVSGGHTHLVLVKEYGTYEIIGRTHDDAAGEAYDKVARAIGLGYPGGPKIDKLAKEGKKNAIVFPRASIEGCPFDFSFSGVKSAVLNYINSSTMKGEAINRADIAASFQEAVVDVLISHTMAAAKEYGMKKIAIAGGVASNSALRSAMEEACKKNQFEFYHPTPLFCTDNAAMIGAAAYYEYLKGNFSGLDLNAVPNLKIGQR
SIO_010081: CPHY_RS01875
subclass of: SO_0000673
so part of: CPHY_RS01875
location: 443503..444552
location: region:443503-444552:1
so has part: feature:443503-444552:1:exon

WP_049762279.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:443503-444552:1:exon

CPHY_RS01880
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: ispD
locus tag: CPHY_RS01880
old locus tag: Cphy_0353
so part of: sequence
location: 444624..445325
location: region:444624-445325:1
so has part: feature:444624-445325:1:exon
subclass of: SO_0000010

position:444624:1
position: 444624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445325:1
position: 445325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444624-445325:1:exon

CPHY_RS01880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: ispD
locus tag: CPHY_RS01880
old locus tag: Cphy_0353
EC number: 2.7.7.60
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198383.1
GO function: GO:0050518 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity [Evidence IEA]
GO process: GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
translation: MEKVTAIVLAAGQGKRMKSSVSKQYMLLKDKPVLYYSLKAFENSLVTDIIVVVGNDEISYVKEEIIKPYGFRKVTHVVEGGSERYLSVLNGLNKIKDSDYVLVHDGARPLIKTNTINTVISEVEEKKACIVGVASKDTVKISTHDGIIDSTPDRNQVYTIQTPQAFEYSILREAYDNLASYQGAMITDDAMIVECLNRYPIYLVQGEYTNIKITTPEDLIFAEAILREHQDFI
SIO_010081: CPHY_RS01880
subclass of: SO_0000673
so part of: CPHY_RS01880
location: 444624..445325
location: region:444624-445325:1
so has part: feature:444624-445325:1:exon

WP_012198383.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:444624-445325:1:exon

CPHY_RS01885
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01885
old locus tag: Cphy_R0024
so part of: sequence
location: 445426..445511
location: region:445426-445511:1
so has part: feature:445426-445511:1:exon
subclass of: SO_0000663

position:445426:1
position: 445426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445511:1
position: 445511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445426-445511:1:exon

CPHY_RS01885
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 357809
locus tag: CPHY_RS01885
old locus tag: Cphy_R0024
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:445460..445462,aa:Ser,seq:tga)
SIO_010081: CPHY_RS01885
subclass of: SO_0000673
so part of: CPHY_RS01885
location: 445426..445511
location: region:445426-445511:1
so has part: feature:445426-445511:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:445426-445511:1:exon

CPHY_RS01890
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01890
old locus tag: Cphy_R0025
so part of: sequence
location: 445606..445694
location: region:445606-445694:1
so has part: feature:445606-445694:1:exon
subclass of: SO_0000663

position:445606:1
position: 445606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445694:1
position: 445694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445606-445694:1:exon

CPHY_RS01890
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 357809
locus tag: CPHY_RS01890
old locus tag: Cphy_R0025
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:445640..445642,aa:Ser,seq:gga)
SIO_010081: CPHY_RS01890
subclass of: SO_0000673
so part of: CPHY_RS01890
location: 445606..445694
location: region:445606-445694:1
so has part: feature:445606-445694:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:445606-445694:1:exon

CPHY_RS01895
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01895
old locus tag: Cphy_R0026
so part of: sequence
location: 446235..447765
location: region:446235-447765:1
so has part: feature:446235-447765:1:exon
subclass of: SO_0000573

position:446235:1
position: 446235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447765:1
position: 447765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446235-447765:1:exon

CPHY_RS01895
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 357809
locus tag: CPHY_RS01895
old locus tag: Cphy_R0026
product: 16S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00177
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: CPHY_RS01895
subclass of: SO_0000673
so part of: CPHY_RS01895
location: 446235..447765
location: region:446235-447765:1
so has part: feature:446235-447765:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:446235-447765:1:exon

CPHY_RS01900
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: rrf
locus tag: CPHY_RS01900
old locus tag: Cphy_R0027
so part of: sequence
location: 447849..447966
location: region:447849-447966:1
so has part: feature:447849-447966:1:exon
subclass of: SO_0000573

position:447849:1
position: 447849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447966:1
position: 447966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447849-447966:1:exon

CPHY_RS01900
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 357809
gene: rrf
locus tag: CPHY_RS01900
old locus tag: Cphy_R0027
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: CPHY_RS01900
subclass of: SO_0000673
so part of: CPHY_RS01900
location: 447849..447966
location: region:447849-447966:1
so has part: feature:447849-447966:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:447849-447966:1:exon

CPHY_RS01905
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01905
old locus tag: Cphy_R0028
so part of: sequence
location: 447973..448045
location: region:447973-448045:1
so has part: feature:447973-448045:1:exon
subclass of: SO_0000663

position:447973:1
position: 447973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448045:1
position: 448045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447973-448045:1:exon

CPHY_RS01905
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 357809
locus tag: CPHY_RS01905
old locus tag: Cphy_R0028
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:448006..448008,aa:Ala,seq:tgc)
SIO_010081: CPHY_RS01905
subclass of: SO_0000673
so part of: CPHY_RS01905
location: 447973..448045
location: region:447973-448045:1
so has part: feature:447973-448045:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:447973-448045:1:exon

CPHY_RS01910
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01910
old locus tag: Cphy_R0029
so part of: sequence
location: 448319..451234
location: region:448319-451234:1
so has part: feature:448319-451234:1:exon
subclass of: SO_0000573

position:448319:1
position: 448319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451234:1
position: 451234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:448319-451234:1:exon

CPHY_RS01910
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 357809
locus tag: CPHY_RS01910
old locus tag: Cphy_R0029
product: 23S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02541
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: CPHY_RS01910
subclass of: SO_0000673
so part of: CPHY_RS01910
location: 448319..451234
location: region:448319-451234:1
so has part: feature:448319-451234:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:448319-451234:1:exon

CPHY_RS01915
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01915
old locus tag: Cphy_R0030
so part of: sequence
location: 451301..451372
location: region:451301-451372:1
so has part: feature:451301-451372:1:exon
subclass of: SO_0000663

position:451301:1
position: 451301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451372:1
position: 451372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:451301-451372:1:exon

CPHY_RS01915
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 357809
locus tag: CPHY_RS01915
old locus tag: Cphy_R0030
product: tRNA-Asn
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:451333..451335,aa:Asn,seq:gtt)
SIO_010081: CPHY_RS01915
subclass of: SO_0000673
so part of: CPHY_RS01915
location: 451301..451372
location: region:451301-451372:1
so has part: feature:451301-451372:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:451301-451372:1:exon

CPHY_RS01920
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01920
old locus tag: Cphy_R0031
so part of: sequence
location: 451454..451525
location: region:451454-451525:1
so has part: feature:451454-451525:1:exon
subclass of: SO_0000663

position:451454:1
position: 451454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451525:1
position: 451525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:451454-451525:1:exon

CPHY_RS01920
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 357809
locus tag: CPHY_RS01920
old locus tag: Cphy_R0031
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:451487..451489,aa:Glu,seq:ttc)
SIO_010081: CPHY_RS01920
subclass of: SO_0000673
so part of: CPHY_RS01920
location: 451454..451525
location: region:451454-451525:1
so has part: feature:451454-451525:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:451454-451525:1:exon

CPHY_RS01925
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01925
old locus tag: Cphy_R0032
so part of: sequence
location: 451645..451717
location: region:451645-451717:1
so has part: feature:451645-451717:1:exon
subclass of: SO_0000663

position:451645:1
position: 451645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451717:1
position: 451717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:451645-451717:1:exon

CPHY_RS01925
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 357809
locus tag: CPHY_RS01925
old locus tag: Cphy_R0032
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:451678..451680,aa:Thr,seq:tgt)
SIO_010081: CPHY_RS01925
subclass of: SO_0000673
so part of: CPHY_RS01925
location: 451645..451717
location: region:451645-451717:1
so has part: feature:451645-451717:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:451645-451717:1:exon

CPHY_RS01930
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01930
old locus tag: Cphy_R0033
so part of: sequence
location: 451746..451819
location: region:451746-451819:1
so has part: feature:451746-451819:1:exon
subclass of: SO_0000663

position:451746:1
position: 451746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451819:1
position: 451819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:451746-451819:1:exon

CPHY_RS01930
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 357809
locus tag: CPHY_RS01930
old locus tag: Cphy_R0033
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:451780..451782,aa:Ile,seq:cat)
SIO_010081: CPHY_RS01930
subclass of: SO_0000673
so part of: CPHY_RS01930
location: 451746..451819
location: region:451746-451819:1
so has part: feature:451746-451819:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:451746-451819:1:exon

CPHY_RS01935
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01935
old locus tag: Cphy_R0034
so part of: sequence
location: 451868..451941
location: region:451868-451941:1
so has part: feature:451868-451941:1:exon
subclass of: SO_0000663

position:451868:1
position: 451868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451941:1
position: 451941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:451868-451941:1:exon

CPHY_RS01935
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 357809
locus tag: CPHY_RS01935
old locus tag: Cphy_R0034
product: tRNA-Asp
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:451902..451904,aa:Asp,seq:gtc)
SIO_010081: CPHY_RS01935
subclass of: SO_0000673
so part of: CPHY_RS01935
location: 451868..451941
location: region:451868-451941:1
so has part: feature:451868-451941:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:451868-451941:1:exon

CPHY_RS01940
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01940
old locus tag: Cphy_R0035
so part of: sequence
location: 452017..452089
location: region:452017-452089:1
so has part: feature:452017-452089:1:exon
subclass of: SO_0000663

position:452017:1
position: 452017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452089:1
position: 452089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452017-452089:1:exon

CPHY_RS01940
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 357809
locus tag: CPHY_RS01940
old locus tag: Cphy_R0035
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:452050..452052,aa:Val,seq:tac)
SIO_010081: CPHY_RS01940
subclass of: SO_0000673
so part of: CPHY_RS01940
location: 452017..452089
location: region:452017-452089:1
so has part: feature:452017-452089:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:452017-452089:1:exon

CPHY_RS01945
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01945
old locus tag: Cphy_R0036
so part of: sequence
location: 452107..452192
location: region:452107-452192:1
so has part: feature:452107-452192:1:exon
subclass of: SO_0000663

position:452107:1
position: 452107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452192:1
position: 452192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452107-452192:1:exon

CPHY_RS01945
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 357809
locus tag: CPHY_RS01945
old locus tag: Cphy_R0036
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:452141..452143,aa:Leu,seq:taa)
SIO_010081: CPHY_RS01945
subclass of: SO_0000673
so part of: CPHY_RS01945
location: 452107..452192
location: region:452107-452192:1
so has part: feature:452107-452192:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:452107-452192:1:exon

CPHY_RS01950
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01950
old locus tag: Cphy_R0037
so part of: sequence
location: 452241..452314
location: region:452241-452314:1
so has part: feature:452241-452314:1:exon
subclass of: SO_0000663

position:452241:1
position: 452241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452314:1
position: 452314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452241-452314:1:exon

CPHY_RS01950
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 357809
locus tag: CPHY_RS01950
old locus tag: Cphy_R0037
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:452275..452277,aa:Arg,seq:acg)
SIO_010081: CPHY_RS01950
subclass of: SO_0000673
so part of: CPHY_RS01950
location: 452241..452314
location: region:452241-452314:1
so has part: feature:452241-452314:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:452241-452314:1:exon

CPHY_RS21555
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS21555
old locus tag: Cphy_0354
so part of: sequence
location: 452927..453502
location: region:452927-453502:1
so has part: feature:452927-453502:1:exon
subclass of: SO_0000010

position:452927:1
position: 452927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453502:1
position: 453502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452927-453502:1:exon

CPHY_RS21555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS21555
old locus tag: Cphy_0354
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSCTDILLISSVACRIAECLDDNELALLAADLLFLSDALNAIAVRRAVCKDICEKKAANTAKNSKDSNANSGNNNSNNNNSNNNNSSENNGSNDNRGNKGNKDGNGNKVGKNNKDSKSNNGNSASSGSSIKQISDEKNVITPVKREQSSEMKTSGSSNMKATFTKNDNSMKMGDNKIVDMSEDINHSNKK
SIO_010081: CPHY_RS21555
subclass of: SO_0000673
so part of: CPHY_RS21555
location: 452927..453502
location: region:452927-453502:1
so has part: feature:452927-453502:1:exon

WP_012198384.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:452927-453502:1:exon

CPHY_RS01960
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01960
old locus tag: Cphy_0355
so part of: sequence
location: complement(453674..454273)
location: region:453674-454273:-1
so has part: feature:453674-454273:-1:exon
subclass of: SO_0000010

position:453674:-1
position: 453674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:454273:-1
position: 454273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453674-454273:-1:exon

CPHY_RS01960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01960
old locus tag: Cphy_0355
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004842077.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lysine exporter LysO family protein
translation: MVLLTVIALLIGIVYGLSGIDITIINFVTEHTHYILYLLMFLVAISIGLNRGIIQKIKEYHVKVFIIPFGIIIGSLLGGIICSFITGISMNTSTAMASGLGWYSLSGVMVSEFAGASFGSITFLSNLMREIFSFFSIPLIAKYLNFPTCIAPAGATSEDTTLPMLIRYTNEETVVLSVINGIICSAAVPILINLCYQIF
SIO_010081: CPHY_RS01960
subclass of: SO_0000673
so part of: CPHY_RS01960
location: complement(453674..454273)
location: region:453674-454273:-1
so has part: feature:453674-454273:-1:exon

WP_012198385.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:453674-454273:-1:exon

CPHY_RS01965
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01965
old locus tag: Cphy_0356
so part of: sequence
location: complement(454276..454560)
location: region:454276-454560:-1
so has part: feature:454276-454560:-1:exon
subclass of: SO_0000010

position:454276:-1
position: 454276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:454560:-1
position: 454560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:454276-454560:-1:exon

CPHY_RS01965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01965
old locus tag: Cphy_0356
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009246236.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDILIIMGIGIFIGSRFFPEKHKKKNEKMQIVCTILIIFSMGVMLGKREHFLQEISTLGLTSFLYFFIPTVFSTLIVYLLTRLFMKKKLKEKED
SIO_010081: CPHY_RS01965
subclass of: SO_0000673
so part of: CPHY_RS01965
location: complement(454276..454560)
location: region:454276-454560:-1
so has part: feature:454276-454560:-1:exon

WP_012198386.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:454276-454560:-1:exon

CPHY_RS01970
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01970
old locus tag: Cphy_0357
so part of: sequence
location: 455528..457405
location: region:455528-457405:1
so has part: feature:455528-457405:1:exon
subclass of: SO_0000010

position:455528:1
position: 455528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457405:1
position: 457405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:455528-457405:1:exon

CPHY_RS01970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01970
old locus tag: Cphy_0357
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013658911.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4914 family protein
translation: MKINQEKWNLPSYIRDILTESKHVYYPRSKKELIHMAFGGEDVDTYEVAYDVPGKGNIVEATVTRCKNGIVVNYPDDYMRRRDPDCLLVADKNDTDKPKYDDVYNQDFEPLRQETFQWLKKQKLIVFAFKSGGEEYGYDTLLVSPANAGFFACAVADLQGFTSMHDISEDFNPKAVIFLAPPFRHTHFDGKQIVIHNRLTGIHELFSYNLYPGPSAKKGIYGVLLNIGENEGWTTVHASTVKVITPYDNEIVIMHEGASGGGKSEMIEHVHREMDGRILLGKNTVTGEKTFIELSESCELRPVTDDMAICHPRMQNDSKKLVVKDAEQGWFLRCDHIKSYGTAPQHEKIFIHPQEPLVFLNIQGVPNSTCLVWEHTLDSNGKPCPNPRVVLPRRLVPNVIDEPVEIDVRSFGVRTPACTKKNPSYGILGMFHILPPALAWLWRLVAPRGYNNPSITSSEGMTSEGVGSYWPFATGKMVEQANLLMEQILNSSHTRYLLIPNQHIGAYEVGFVPQWVAREYIARRGSAKFKPEHLVEARCSILGYGLGSLKVDGQYIRKAFLQPEMQQEVGIEGYDAGSKILLDFFKEEVQKFLTPELHEMGRKIIELLLSDASVQEYNDLLPMRY
SIO_010081: CPHY_RS01970
subclass of: SO_0000673
so part of: CPHY_RS01970
location: 455528..457405
location: region:455528-457405:1
so has part: feature:455528-457405:1:exon

WP_041703083.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:455528-457405:1:exon

CPHY_RS01975
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01975
old locus tag: Cphy_0358
so part of: sequence
location: 457661..458350
location: region:457661-458350:1
so has part: feature:457661-458350:1:exon
subclass of: SO_0000010

position:457661:1
position: 457661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458350:1
position: 458350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:457661-458350:1:exon

CPHY_RS01975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01975
old locus tag: Cphy_0358
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016439624.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator transcription factor
translation: MKKILVVEDDLNINNMLREALEEAGYEVVQAYSGTEAMLNVGMTEFDLILLDLMLPGMSGEEFLKLFNKKERTPVIVLSAKDELDSKVDVLSCGADDYITKPFQLKELLVRIEVALRRVNRNIEKSQDETNQCLSHKDLLLNRSSYEVRLAGNLISLTKQEYKILELLLLHPNKVFSKQEIYNYAWEEYFIGEDKTINVHISNIRMKLKKVTEDDYIDTVWGIGFKLSK
SIO_010081: CPHY_RS01975
subclass of: SO_0000673
so part of: CPHY_RS01975
location: 457661..458350
location: region:457661-458350:1
so has part: feature:457661-458350:1:exon

WP_012198388.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:457661-458350:1:exon

CPHY_RS01980
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01980
old locus tag: Cphy_0359
so part of: sequence
location: 458494..459414
location: region:458494-459414:1
so has part: feature:458494-459414:1:exon
subclass of: SO_0000010

position:458494:1
position: 458494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459414:1
position: 459414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458494-459414:1:exon

CPHY_RS01980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01980
old locus tag: Cphy_0359
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009247128.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding cassette domain-containing protein
translation: MNDILLRSSVLTKKYKNYAAVNQVNLTIKRGDIYGFIGRNGAGKTTFLKMISGLAKQTSGNIELFGADCNKQKELFSRIGVLIEAPGLFPNMTAFENLKMKCISHGIQDDNYIHEIIELIGLKDVNKKKTKNYSLGMKQRLGIGMALIGDPDLLVLDEPINGLDPQGIVEVRDTIQRLNKERNMTIIISSHILEELSKIATRYGIIDKGVLLQELTCEELMERCSERIQITLTGVKEACTILEEKLGIKDYKVINPSTIYVFEHLDNPALINMTLCNNGVLVSSFHVANDDLETYFINLTGGVSHA
SIO_010081: CPHY_RS01980
subclass of: SO_0000673
so part of: CPHY_RS01980
location: 458494..459414
location: region:458494-459414:1
so has part: feature:458494-459414:1:exon

WP_012198389.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:458494-459414:1:exon

CPHY_RS01985
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01985
old locus tag: Cphy_0360
so part of: sequence
location: 459407..460231
location: region:459407-460231:1
so has part: feature:459407-460231:1:exon
subclass of: SO_0000010

position:459407:1
position: 459407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460231:1
position: 460231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:459407-460231:1:exon

CPHY_RS01985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01985
old locus tag: Cphy_0360
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MLKTIKMDLYRMFRSKSFYVTLFITFILVVVSVITIKIVLNNDNLKNIYDQGMDVSDSVIVGIGTGPMNVDSIELTLGDLFSSSVGGASLAVVAVIFAIIFVCSEHNSGYIKNVISRKGYRDYFTISKAICMAIYLLITLLGAAILIGISSSLLLDTFRLGNISEFASYFFTQYLLHFALVMLVIFLCNLSRNMAISMAVGICICSGMLALLTGLLDRLKLNIVFSNYLVTTNMKLLPIPYDATIYTRAILVSLVVTIVFGISSIILMRKQDVR
SIO_010081: CPHY_RS01985
subclass of: SO_0000673
so part of: CPHY_RS01985
location: 459407..460231
location: region:459407-460231:1
so has part: feature:459407-460231:1:exon

WP_012198390.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:459407-460231:1:exon

CPHY_RS01990
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01990
old locus tag: Cphy_0361
so part of: sequence
location: 460345..461238
location: region:460345-461238:1
so has part: feature:460345-461238:1:exon
subclass of: SO_0000010

position:460345:1
position: 460345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461238:1
position: 461238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460345-461238:1:exon

CPHY_RS01990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01990
old locus tag: Cphy_0361
inference: COORDINATES: protein motif:HMM:NF014567.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAMP domain-containing sensor histidine kinase
translation: MTWIIVIALCIAVGYFIAVLQYKKQIRTWNQNLSFILSNNSNMRLEQLVPSKDVSKLLDLLNELMQRHRKLKVEYEVKDEAFKQLITNLSHDIRTPLTSLDGYFQLLTKAKEPEVREHYITIIEGRIRQLSEMLDQLFLYMKLQNDCYELSIEKCNLSQILCECILDFYEQFTNRGIEPVIHLPEEEMIMLGNPSALIRILQNMIKNALEHGNEHFQITLEKEEEIVVTCKNGYANGEEVDFSLIFERFYKADKARTRSSTGLGLAIAKELTEKLGGSIEAINEGTEFLIKVHFPVG
SIO_010081: CPHY_RS01990
subclass of: SO_0000673
so part of: CPHY_RS01990
location: 460345..461238
location: region:460345-461238:1
so has part: feature:460345-461238:1:exon

WP_012198391.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:460345-461238:1:exon

CPHY_RS01995
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS01995
old locus tag: Cphy_0362
so part of: sequence
location: complement(461569..463122)
location: region:461569-463122:-1
so has part: feature:461569-463122:-1:exon
subclass of: SO_0000010

position:461569:-1
position: 461569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:463122:-1
position: 463122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:461569-463122:-1:exon

CPHY_RS01995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS01995
old locus tag: Cphy_0362
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004222789.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC-F family ATP-binding cassette domain-containing protein
translation: MSILNVSNLNHGFGERMIFHDVSFRLLKGEHIGLIGANGEGKSTFMNIITNKLMPDEGTIEWSKNVRVGYLDQHSVLEKGMSIRDVLKSAFNFLFELESKMNSICNELADASDEKMAELMEEFGTIQDLLDAHDFYIIDSKVEEIGRALGLTDIGLDKDVTDLSGGQRTKVLLGKLLLEKPDILLLDEPTNYLDVEHIEWLKRYLQEYENAFILISHDIPFLNSVINLIYHMENGELNRYVGDYDKFQEVYAMKKSQLEAAYKKQQQEISELQDFVARNKARVSTRNMAMSRQKKLDKMDVIELAKEKPKPEFHFKEARAASRYIFQTEHLVIGYDEPLSQPITLSMERGDKIILKGANGIGKTTLMKSILGIIPSLSGNVTLGDYLYQGYFEQEMTGAKNNTCIEELWREFPSWTQYEVRSALAKCGLTTKHIESQVRVLSGGEQAKVRLCKLINRDTNILLLDEPTNHLDVEAKDELKRALSEYKGSILLICHEPDFYENFATKVIDCSNWSTKI
SIO_010081: CPHY_RS01995
subclass of: SO_0000673
so part of: CPHY_RS01995
location: complement(461569..463122)
location: region:461569-463122:-1
so has part: feature:461569-463122:-1:exon

WP_012198392.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:461569-463122:-1:exon

CPHY_RS20490
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS20490
old locus tag: Cphy_0363
so part of: sequence
location: 463437..463946
location: region:463437-463946:1
so has part: feature:463437-463946:1:exon
subclass of: SO_0000010

position:463437:1
position: 463437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463946:1
position: 463946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:463437-463946:1:exon

CPHY_RS20490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS20490
old locus tag: Cphy_0363
inference: COORDINATES: protein motif:HMM:NF019618.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1700 domain-containing protein
translation: MTIQEFLNQLRDSLDGELPYNEIVSNINYYRDYMNSKKGEQSEEEITAGLGDPRLIARTIIETYQMNHDNKVHYQSYSYSDGGNYQSTNSSNTNYDRDRDRKKERDHSVFKTIGIQGWLGCLVSLIILFIVLGAVFWIGAIAFKVFIRFVLPIILIVAGISYLSNRFKK
SIO_010081: CPHY_RS20490
subclass of: SO_0000673
so part of: CPHY_RS20490
location: 463437..463946
location: region:463437-463946:1
so has part: feature:463437-463946:1:exon

WP_012198393.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:463437-463946:1:exon

CPHY_RS02005
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02005
old locus tag: Cphy_0364
so part of: sequence
location: complement(464091..464651)
location: region:464091-464651:-1
so has part: feature:464091-464651:-1:exon
subclass of: SO_0000010

position:464091:-1
position: 464091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464651:-1
position: 464651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464091-464651:-1:exon

CPHY_RS02005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02005
old locus tag: Cphy_0364
inference: COORDINATES: protein motif:HMM:NF013358.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GPR1/FUN34/YaaH family transporter
translation: MSTETKATIANPAPLGLLGFGMTTCLLNLHNAGIIPLSIVTVAMGFALGGAAQIIAGIMEFKKNNTFGATAFTAYGFFWWSLILIWMNPTKSIASSDSISLGYYLLLWGIFTLFMFIGTLKHNIASRIVFGSLALLFFLLAAANFTDSHSIHTIAGYVGIFCGLSAIYNSVAQVINEEYKKTILPL
SIO_010081: CPHY_RS02005
subclass of: SO_0000673
so part of: CPHY_RS02005
location: complement(464091..464651)
location: region:464091-464651:-1
so has part: feature:464091-464651:-1:exon

WP_012198394.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:464091-464651:-1:exon

CPHY_RS02010
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02010
so part of: sequence
location: 465280..465480
location: region:465280-465480:1
so has part: feature:465280-465480:1:exon
subclass of: SO_0000010

position:465280:1
position: 465280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465480:1
position: 465480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465280-465480:1:exon

CPHY_RS02010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02010
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSENNSRNANSNNANSNNTNSNNTNSNNTGSNKNSQNSQNAQNTQNTSKNYSGSSKNTQNNQNYR
SIO_010081: CPHY_RS02010
subclass of: SO_0000673
so part of: CPHY_RS02010
location: 465280..465480
location: region:465280-465480:1
so has part: feature:465280-465480:1:exon

WP_041703088.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:465280-465480:1:exon

CPHY_RS02015
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02015
old locus tag: Cphy_0365
so part of: sequence
location: 465733..466035
location: region:465733-466035:1
so has part: feature:465733-466035:1:exon
subclass of: SO_0000010

position:465733:1
position: 465733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466035:1
position: 466035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465733-466035:1:exon

CPHY_RS02015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02015
old locus tag: Cphy_0365
inference: COORDINATES: protein motif:HMM:NF012790.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rhodanese-like domain-containing protein
translation: MYFEGVRLDEISRYIDRKDAIIVDLRKKEDYDKGHIPNAVSVPYTSSEELAEKVRYFKVIILYCYRGNLSMLAARDLSGIQGKVYHICGGIHAYPYRLER
SIO_010081: CPHY_RS02015
subclass of: SO_0000673
so part of: CPHY_RS02015
location: 465733..466035
location: region:465733-466035:1
so has part: feature:465733-466035:1:exon

WP_012198395.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:465733-466035:1:exon

CPHY_RS02025
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02025
old locus tag: Cphy_0366
so part of: sequence
location: 466188..467330
location: region:466188-467330:1
so has part: feature:466188-467330:1:exon
subclass of: SO_0000010

position:466188:1
position: 466188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:467330:1
position: 467330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:466188-467330:1:exon

CPHY_RS02025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02025
old locus tag: Cphy_0366
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016439721.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent RNA methyltransferase
translation: MSRYEYIAPCHFGLEAVLKREITDLGYEIVSVEDGRVIFAGDETAICRANMFLRTTERILIKVAKFKAETFEELFQNTKEVPWEQYIPKDGKFWVAKATSIKSKLFSPTDIQSIMKKAMVERLKGVYKVEWFEESGNEYPVRVTFMKDEITIGIDTSGVSLHKRGYRKLISKAPITETLAAALIMLTPWNKDCVLIDPFCGSGTFPIEAAMIGARIAPGLNRSFLAENWTDLIPKKAWYEAAEEANGMILHDIEMNIQGYDIDGEVIKAAKQNAEVAGVDQYIHFQKRSVSELSSPKKYGFIITNPPYGERLEDKSAMPPIYHEIGQAMKRLDTWSSYLITSYEDAEKHIGRQADRNRKIYNGMLKTYFYQYMGPKPPKR
SIO_010081: CPHY_RS02025
subclass of: SO_0000673
so part of: CPHY_RS02025
location: 466188..467330
location: region:466188-467330:1
so has part: feature:466188-467330:1:exon

WP_012198396.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:466188-467330:1:exon

CPHY_RS02030
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02030
old locus tag: Cphy_0367
so part of: sequence
location: complement(467424..468344)
location: region:467424-468344:-1
so has part: feature:467424-468344:-1:exon
subclass of: SO_0000010

position:467424:-1
position: 467424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:468344:-1
position: 468344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:467424-468344:-1:exon

CPHY_RS02030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02030
old locus tag: Cphy_0367
inference: COORDINATES: protein motif:HMM:NF023568.2
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta hydrolase
translation: MKATSTIVVQKDGYETVLYPQLCQTEPVKGTILLLHGMAEHHKRYQTFTDYLNSCGYDVYRYNHRGHGMDQKLEDLGYIADDDGYKLLISDALNVLTYLKENNRTNKLILIGHSMGSLVSRNVLQFFKDLDCAVLIGTAFNPRTKSRIGIACAHTIKKFKGARHYSPFLNKQMFETKHYTSLSERTNFDWLSRNNPNVGAYIHDPYCGFQCSISFYEDLANLDYHAGLPKRIKLVRKDLPILFTSGTKDPVSRYGKDVERLFMLHKRLGFQKVDCIMYKDCRHELLNELNAEEIMKDIEDWVTKHI
SIO_010081: CPHY_RS02030
subclass of: SO_0000673
so part of: CPHY_RS02030
location: complement(467424..468344)
location: region:467424-468344:-1
so has part: feature:467424-468344:-1:exon

WP_012198397.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:467424-468344:-1:exon

CPHY_RS20495
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS20495
old locus tag: Cphy_0368
so part of: sequence
location: 468619..470043
location: region:468619-470043:1
so has part: feature:468619-470043:1:exon
subclass of: SO_0000010

position:468619:1
position: 468619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470043:1
position: 470043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:468619-470043:1:exon

CPHY_RS20495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS20495
old locus tag: Cphy_0368
inference: COORDINATES: protein motif:HMM:NF013670.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N-acetylmuramoyl-L-alanine amidase
translation: MPEDRILKRAAAYSVLLMACVLLIPFVLKLEKGKVTYAGVFPMLPTTISTMLPIGEKESLKYLSHQEDSDCKQNIKQQIPGGISENLKERLGNNFIVVEKPCHLSNSAMVELIDEAVDRKIRFIITDSYEIKIEDNQIHRMYQGNYYKGKPESEAPKATTVPENQKEQLVENQPLTSASAGKEKVDSVTSDNTKDTASNQASTTGSNESSPEKEESESITFTDCIKSIQINSYAYPDNESFKTEITLELDKTYAYVLFEDDHNYYISLVRPKDIYDKIIVVDAGHGGYDSGTYSRDFVYHEKDMNLSMVLELKKLLDKEDIKVYYTRTTDRGLTLNQRVTLANDVEADLFLSFHCNANEERGVHGTEVLYNEKQNDWTRMNSKSFATLCLEEVLNEIGLEDRGLVPRSKDVYIVGEANVPVALVEAAFMSNQGDLNFLASKDGKQKVAKGAYNAILSAYKELEQEDKGQKTVMR
SIO_010081: CPHY_RS20495
subclass of: SO_0000673
so part of: CPHY_RS20495
location: 468619..470043
location: region:468619-470043:1
so has part: feature:468619-470043:1:exon

WP_012198398.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:468619-470043:1:exon

CPHY_RS02040
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02040
old locus tag: Cphy_0369
so part of: sequence
location: 470342..470923
location: region:470342-470923:1
so has part: feature:470342-470923:1:exon
subclass of: SO_0000010

position:470342:1
position: 470342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470923:1
position: 470923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:470342-470923:1:exon

CPHY_RS02040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02040
old locus tag: Cphy_0369
EC number: 3.6.1.66
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015521118.1
GO function: GO:0047429 - nucleoside triphosphate diphosphatase activity [Evidence IEA]
GO process: GO:0009143 - nucleoside triphosphate catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: XTP/dITP diphosphatase
translation: MRKIIFATSNEGKMREIRMILKDLDYEVVSMKEAGIDISIEETGTTFEENAIIKAKTIMEMTGEIVLADDSGLEVDYLEKAPGVYSARYLGEDTSYDIKNNHILSLLEGVAEEKRSARFVCVIACAWPNGEIKVKRATIEGNIGYEIAGENGFGYDPIFVVPEYGCTTAELTAEQKNTISHRAKALNAMKEEL
SIO_010081: CPHY_RS02040
subclass of: SO_0000673
so part of: CPHY_RS02040
location: 470342..470923
location: region:470342-470923:1
so has part: feature:470342-470923:1:exon

WP_012198399.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:470342-470923:1:exon

CPHY_RS02045
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02045
old locus tag: Cphy_0370
so part of: sequence
location: 470940..471434
location: region:470940-471434:1
so has part: feature:470940-471434:1:exon
subclass of: SO_0000010

position:470940:1
position: 470940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:471434:1
position: 471434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:470940-471434:1:exon

CPHY_RS02045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02045
old locus tag: Cphy_0370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018593023.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metallophosphoesterase
translation: MNILIVSDSHGRYTNLERAIKKVSPIDMLIHLGDYEGDASYIKEIADCPVEMVSGNNDYFTDIPREKFLEIGKYYVMLTHGHRYGVNYGTEQLKEAAVLNGADIVMFGHTHQPLIDLKDDSLAVINPGSITQPRQAGRIPTFILMEIDSKGEAHYTLNYIEDSL
SIO_010081: CPHY_RS02045
subclass of: SO_0000673
so part of: CPHY_RS02045
location: 470940..471434
location: region:470940-471434:1
so has part: feature:470940-471434:1:exon

WP_012198400.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:470940-471434:1:exon

CPHY_RS02050
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02050
old locus tag: Cphy_R0038
so part of: sequence
location: 471589..471663
location: region:471589-471663:1
so has part: feature:471589-471663:1:exon
subclass of: SO_0000663

position:471589:1
position: 471589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:471663:1
position: 471663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471589-471663:1:exon

CPHY_RS02050
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 357809
locus tag: CPHY_RS02050
old locus tag: Cphy_R0038
product: tRNA-Pro
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:471624..471626,aa:Pro,seq:tgg)
SIO_010081: CPHY_RS02050
subclass of: SO_0000673
so part of: CPHY_RS02050
location: 471589..471663
location: region:471589-471663:1
so has part: feature:471589-471663:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:471589-471663:1:exon

CPHY_RS02055
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02055
old locus tag: Cphy_R0039
so part of: sequence
location: 471684..471754
location: region:471684-471754:1
so has part: feature:471684-471754:1:exon
subclass of: SO_0000663

position:471684:1
position: 471684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:471754:1
position: 471754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471684-471754:1:exon

CPHY_RS02055
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 357809
locus tag: CPHY_RS02055
old locus tag: Cphy_R0039
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:471716..471718,aa:Gly,seq:tcc)
SIO_010081: CPHY_RS02055
subclass of: SO_0000673
so part of: CPHY_RS02055
location: 471684..471754
location: region:471684-471754:1
so has part: feature:471684-471754:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:471684-471754:1:exon

CPHY_RS02060
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02060
old locus tag: Cphy_R0040
so part of: sequence
location: 471791..471864
location: region:471791-471864:1
so has part: feature:471791-471864:1:exon
subclass of: SO_0000663

position:471791:1
position: 471791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:471864:1
position: 471864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471791-471864:1:exon

CPHY_RS02060
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 357809
locus tag: CPHY_RS02060
old locus tag: Cphy_R0040
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:471825..471827,aa:Arg,seq:tct)
SIO_010081: CPHY_RS02060
subclass of: SO_0000673
so part of: CPHY_RS02060
location: 471791..471864
location: region:471791-471864:1
so has part: feature:471791-471864:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:471791-471864:1:exon

CPHY_RS02065
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02065
old locus tag: Cphy_R0041
so part of: sequence
location: 471894..471967
location: region:471894-471967:1
so has part: feature:471894-471967:1:exon
subclass of: SO_0000663

position:471894:1
position: 471894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:471967:1
position: 471967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471894-471967:1:exon

CPHY_RS02065
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 357809
locus tag: CPHY_RS02065
old locus tag: Cphy_R0041
product: tRNA-His
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:471928..471930,aa:His,seq:gtg)
SIO_010081: CPHY_RS02065
subclass of: SO_0000673
so part of: CPHY_RS02065
location: 471894..471967
location: region:471894-471967:1
so has part: feature:471894-471967:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:471894-471967:1:exon

CPHY_RS02070
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02070
old locus tag: Cphy_R0042
so part of: sequence
location: 472023..472094
location: region:472023-472094:1
so has part: feature:472023-472094:1:exon
subclass of: SO_0000663

position:472023:1
position: 472023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472094:1
position: 472094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472023-472094:1:exon

CPHY_RS02070
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 357809
locus tag: CPHY_RS02070
old locus tag: Cphy_R0042
product: tRNA-Gln
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:472055..472057,aa:Gln,seq:ttg)
SIO_010081: CPHY_RS02070
subclass of: SO_0000673
so part of: CPHY_RS02070
location: 472023..472094
location: region:472023-472094:1
so has part: feature:472023-472094:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:472023-472094:1:exon

CPHY_RS02075
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02075
old locus tag: Cphy_R0043
so part of: sequence
location: 472117..472189
location: region:472117-472189:1
so has part: feature:472117-472189:1:exon
subclass of: SO_0000663

position:472117:1
position: 472117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472189:1
position: 472189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472117-472189:1:exon

CPHY_RS02075
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 357809
locus tag: CPHY_RS02075
old locus tag: Cphy_R0043
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:472150..472152,aa:Lys,seq:ttt)
SIO_010081: CPHY_RS02075
subclass of: SO_0000673
so part of: CPHY_RS02075
location: 472117..472189
location: region:472117-472189:1
so has part: feature:472117-472189:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:472117-472189:1:exon

CPHY_RS02080
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02080
old locus tag: Cphy_R0044
so part of: sequence
location: 472247..472326
location: region:472247-472326:1
so has part: feature:472247-472326:1:exon
subclass of: SO_0000663

position:472247:1
position: 472247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472326:1
position: 472326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472247-472326:1:exon

CPHY_RS02080
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 357809
locus tag: CPHY_RS02080
old locus tag: Cphy_R0044
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:472281..472283,aa:Leu,seq:tag)
SIO_010081: CPHY_RS02080
subclass of: SO_0000673
so part of: CPHY_RS02080
location: 472247..472326
location: region:472247-472326:1
so has part: feature:472247-472326:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:472247-472326:1:exon

CPHY_RS02085
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02085
old locus tag: Cphy_R0045
so part of: sequence
location: 472399..472473
location: region:472399-472473:1
so has part: feature:472399-472473:1:exon
subclass of: SO_0000663

position:472399:1
position: 472399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472473:1
position: 472473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472399-472473:1:exon

CPHY_RS02085
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 357809
locus tag: CPHY_RS02085
old locus tag: Cphy_R0045
product: tRNA-Pro
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:472434..472436,aa:Pro,seq:tgg)
SIO_010081: CPHY_RS02085
subclass of: SO_0000673
so part of: CPHY_RS02085
location: 472399..472473
location: region:472399-472473:1
so has part: feature:472399-472473:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:472399-472473:1:exon

CPHY_RS02090
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02090
old locus tag: Cphy_0371
so part of: sequence
location: 472717..473262
location: region:472717-473262:1
so has part: feature:472717-473262:1:exon
subclass of: SO_0000010

position:472717:1
position: 472717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473262:1
position: 473262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472717-473262:1:exon

CPHY_RS02090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02090
old locus tag: Cphy_0371
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005604745.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DJ-1/PfpI family protein
translation: MAKVYVFLADGFEEIEALTVVDLLRRAGVDVTTVSITENNLVHGAHGIDVMADILFKDDLSEADMLVLPGGGLGTRNLLDHEGLKDLLIDYEKKGRYLAAICAAPSILGTHGLLKGKRAICYPGFEDKLTGAVVTNDKVVVDGKIITSKGAGTSIEFSLELIKILCGEEASNQILNGIQYQ
SIO_010081: CPHY_RS02090
subclass of: SO_0000673
so part of: CPHY_RS02090
location: 472717..473262
location: region:472717-473262:1
so has part: feature:472717-473262:1:exon

WP_012198401.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:472717-473262:1:exon

CPHY_RS02095
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02095
old locus tag: Cphy_0372
so part of: sequence
location: 473387..474736
location: region:473387-474736:1
so has part: feature:473387-474736:1:exon
subclass of: SO_0000010

position:473387:1
position: 473387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474736:1
position: 474736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473387-474736:1:exon

CPHY_RS02095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02095
old locus tag: Cphy_0372
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKEIKEEYSYIVSRNKESEHKSRVKKAIAIFATLSFLVGAFLLFDQLAPRIAFSKEEDTESVDQANVKSVREISLLDNKEVTVPAALTKIEPITEGTMVNIILDYANDKITVKPGTSTSTKLYFSQDKMKTWEKMTGNNVNNGLDIDLSIFLKTSDNTIYFKGDKDKAIAAVTLPKEDKDFKVSYYVENGAGKLKFENQTRLVEYRKGANGIWTQCDSNLVLSSYEITGYTLQFRLKATTAERAGKIVNVKIPKREAPPKITIDYSKMEVSGLKAGSTMYQKNGESAFRLFAPADSKVKTLSLYDLLFTSTVAPNTQFSAVSIEFYTAGSDKKVASSTVVVEFQAQPAAPTGNVVTLDKTTVTFPAATKTAPYEYVVLHQGENLDLSKVKWTKVTTNKPFEIKKVGKATPAPHDVIYFRLASTIDKETKVVTPASVYLKIEIQNVPITK
SIO_010081: CPHY_RS02095
subclass of: SO_0000673
so part of: CPHY_RS02095
location: 473387..474736
location: region:473387-474736:1
so has part: feature:473387-474736:1:exon

WP_041703091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:473387-474736:1:exon

CPHY_RS02100
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02100
old locus tag: Cphy_0373
so part of: sequence
location: complement(474739..476121)
location: region:474739-476121:-1
so has part: feature:474739-476121:-1:exon
subclass of: SO_0000010

position:474739:-1
position: 474739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:476121:-1
position: 476121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:474739-476121:-1:exon

CPHY_RS02100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02100
old locus tag: Cphy_0373
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009253098.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0005416 - amino acid:monoatomic cation symporter activity [Evidence IEA]
GO process: GO:0006865 - amino acid transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amino acid carrier protein
translation: MNNLLKSIQTINHYLWGGPMLFLLFGTHLYFTFRLRFIQKELKKGIRNSVSTKTDAHGNSSSFKTLTTTLAATLGTGNIVGISTAVALGGPGAVLWCWLTGIFGMATTYAECYLGMWYRKQKPDGTYSGGPMYALEYGLHSKWLAVIFCIATLFVAFSMGGFTQARSITDATKSLGISPILTGIIAAFLIGLVIVGGVNSIQNVCMKLVPAMAIFYVAGCVIILFVNLPYVLPTLSTIVKTAFSTKAVTGGVLGGSIGIAARYGISRGLFTNEAGLGSAAIAAGGSAITDESSISESVPSSSKAKSTQNHSDSLDLRYKNQALVSMSATFWDTVVMCALTGLIIVSTILKNPDSIKGLSMGELTTAAFAQIPFGVFMLRISLVAFAVATLIGWSYFGEKAVEYLFPKKGIDIYRLVYILMIFFGSIMSLELVWESSDLINAFMTIPNLIALWLLRKKIKC
SIO_010081: CPHY_RS02100
subclass of: SO_0000673
so part of: CPHY_RS02100
location: complement(474739..476121)
location: region:474739-476121:-1
so has part: feature:474739-476121:-1:exon

WP_012198403.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:474739-476121:-1:exon

CPHY_RS02105
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02105
old locus tag: Cphy_0374
so part of: sequence
location: 476696..476917
location: region:476696-476917:1
so has part: feature:476696-476917:1:exon
subclass of: SO_0000010

position:476696:1
position: 476696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476917:1
position: 476917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476696-476917:1:exon

CPHY_RS02105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02105
old locus tag: Cphy_0374
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015559764.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta-type small acid-soluble spore protein
translation: MTSSNQGTSGSNRMAVPEAKEAMNRMKMEVASELGVPLTQGYNGNLTSAQNGSVGGEMVRQMIKRQEESMSGK
SIO_010081: CPHY_RS02105
subclass of: SO_0000673
so part of: CPHY_RS02105
location: 476696..476917
location: region:476696-476917:1
so has part: feature:476696-476917:1:exon

WP_012198404.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:476696-476917:1:exon

CPHY_RS02110
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: glmM
locus tag: CPHY_RS02110
old locus tag: Cphy_0375
so part of: sequence
location: 477102..478448
location: region:477102-478448:1
so has part: feature:477102-478448:1:exon
subclass of: SO_0000010

position:477102:1
position: 477102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478448:1
position: 478448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:477102-478448:1:exon

CPHY_RS02110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: glmM
locus tag: CPHY_RS02110
old locus tag: Cphy_0375
EC number: 5.4.2.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016441489.1
GO function: GO:0008966 - phosphoglucosamine mutase activity [Evidence IEA]
GO process: GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoglucosamine mutase
translation: MGKYFGTDGFRGEANKTLTVEHAYKVGRFLGWYYGKDHKAKVAIGKDTRRSSYMFEYSLVAGLTASGADVYLLHVTPTPSVSYVVRSEGFDCGIMISASHNPFQDNGIKVINGGGYKLENEVEKLIEDYIDGEIPEIPFAFGENIGKTVDYSMGRHRYIGHLISLATRSFKGIKVGLDLANGSATTVAKGVFDALGAKTYVIHGEPDGVNINSDCGSTHIEQLQKFVVEQGLDIGFAYDGDADRCLAVDELGQVIDGDAILYLCGCYMKERGELRNNTVVTTIMSNLGLYKSLDAKEIGYAKTAVGDKYVFENMMEHGHSIGGEQSGHIIFNKHATTGDGVLTSLKIMEVMLEKKEKISVLLRELKIYPQLLLNIPVVDKKMAKNDPDVMEAAKAVELELGDEGRILVRESGTESVIRVMVEAGSNEVCQKYADNVVVVLRQKGHIKA
SIO_010081: CPHY_RS02110
subclass of: SO_0000673
so part of: CPHY_RS02110
location: 477102..478448
location: region:477102-478448:1
so has part: feature:477102-478448:1:exon

WP_012198405.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:477102-478448:1:exon

CPHY_RS02115
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: tig
locus tag: CPHY_RS02115
old locus tag: Cphy_0376
so part of: sequence
location: 478875..480161
location: region:478875-480161:1
so has part: feature:478875-480161:1:exon
subclass of: SO_0000010

position:478875:1
position: 478875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480161:1
position: 480161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:478875-480161:1:exon

CPHY_RS02115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: tig
locus tag: CPHY_RS02115
old locus tag: Cphy_0376
EC number: 5.2.1.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198406.1
GO component: GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO function: GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO process: GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: trigger factor
translation: MSFKVEDLGKNMVKLTIEATAEDFDKAIEQAYQKNKGKMNVQGFRKGKAPRAIIEKMYGVGVFYEDAANFIIPEAYEQAIEESKLDVVARPEIDVVQVEKGQPFIFTAEVAVKPEVTLGAYKGVEVSKSEIEVTEDEIMAELDKVREQNSRTITVEDRAVMDKDIVTIDFEGFVDGVAFEGGKGEDYALTIGSHSFIDTFEDQLVGKNIGEDVEVNVTFPTEYHAADLAGKPALFKVKVKEIKAKELPAADDEFAGDVSEFNTLEEYKADLKKSLTEKKDKAAKTAKEDAVVDKVIENATMEIPDAMVDTQKRQMAEDFAQRLKMQGLSLEQYFQFTGLNPNTFMENLGPQALKRIQSRLVLEAVVKAENITVSVEEIDKELAEMASAYQMEVDKLKELIGEKEKEQIVMDMAVQKAIDLVASEAKEV
SIO_010081: CPHY_RS02115
subclass of: SO_0000673
so part of: CPHY_RS02115
location: 478875..480161
location: region:478875-480161:1
so has part: feature:478875-480161:1:exon

WP_012198406.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:478875-480161:1:exon

CPHY_RS02120
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: clpP
locus tag: CPHY_RS02120
old locus tag: Cphy_0377
so part of: sequence
location: 480272..480853
location: region:480272-480853:1
so has part: feature:480272-480853:1:exon
subclass of: SO_0000010

position:480272:1
position: 480272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480853:1
position: 480853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:480272-480853:1:exon

CPHY_RS02120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: clpP
locus tag: CPHY_RS02120
old locus tag: Cphy_0377
EC number: 3.4.21.92
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008397808.1
GO component: GO:0009368 - endopeptidase Clp complex [Evidence IEA]
GO function: GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent Clp endopeptidase proteolytic subunit ClpP
translation: MSLVPYVIEQTSRGERSYDIYSRLLKERIIFLGEEVTDVSASVIVAQLLFLEAEDPGKDISLYINSPGGSVTAGMAIYDTMNYIKCDVSTICIGMAASMGAFLLAGGAKGKRFALPNAEVMIHQPSGGAKGQATDIQIVAENILKIKKKLNTILSENTGKPLEVVEVDTERDYYMSAEEAKNYGIIDSVIASR
SIO_010081: CPHY_RS02120
subclass of: SO_0000673
so part of: CPHY_RS02120
location: 480272..480853
location: region:480272-480853:1
so has part: feature:480272-480853:1:exon

WP_012198407.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:480272-480853:1:exon

CPHY_RS02125
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: clpX
locus tag: CPHY_RS02125
old locus tag: Cphy_0378
so part of: sequence
location: 480918..482219
location: region:480918-482219:1
so has part: feature:480918-482219:1:exon
subclass of: SO_0000010

position:480918:1
position: 480918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:482219:1
position: 482219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:480918-482219:1:exon

CPHY_RS02125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: clpX
locus tag: CPHY_RS02125
old locus tag: Cphy_0378
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198408.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent Clp protease ATP-binding subunit ClpX
translation: MANRTEDRKQVRCSFCGKSQEQVRKLLAGPGDVYICDECIELCYEIVEEEFDDDVAESASGINLLKPKEIKEFLDQYVIGQEEAKKVLSVSVYNHYKRVLSEKDLDVELQKSNILMIGPTGSGKTYVAQTLAKILNVPFAIADATALTEAGYVGEDVENILLKIIQAADYDIERAQYGIIYIDEIDKITRKSENTSITRDVSGEGVQQALLKILEGSVASVPPQGGRKHPHQEFIQIDTTNILFICGGAFDGLEKIVEARIGQKSIGFNAEIAHGQKENIGDLFRQVLPQDLIKFGMIPEFVGRVPVNTALDLLDEQALVRILTEPKNAITKQYRKLFELDGVELVFEEDALKEIAKRSFERKTGARGLRAIMESVMMDSMFKVPTDTSVLKCIITKESAEGKEEPRLVTAENGQQRKIAQKKVAKKSSNEIA
SIO_010081: CPHY_RS02125
subclass of: SO_0000673
so part of: CPHY_RS02125
location: 480918..482219
location: region:480918-482219:1
so has part: feature:480918-482219:1:exon

WP_012198408.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:480918-482219:1:exon

CPHY_RS02130
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: lon
locus tag: CPHY_RS02130
old locus tag: Cphy_0379
so part of: sequence
location: 482373..484802
location: region:482373-484802:1
so has part: feature:482373-484802:1:exon
subclass of: SO_0000010

position:482373:1
position: 482373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:484802:1
position: 484802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482373-484802:1:exon

CPHY_RS02130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: lon
locus tag: CPHY_RS02130
old locus tag: Cphy_0379
EC number: 3.4.21.53
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198409.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: endopeptidase La
translation: MSEYTRQLPVVALRNMAVMPGMLIHFDVNRKVSIEAIEAAMLLNQQVLLVSQIDAETENPTADDLYRVGTIAEIKQMIKLPGNVIRVLVTGLERATLDSLVSEQPYLKAQLTSKEAELLNLTEAEEEAMVRALRDLFEVYTTENNKLNKDIIRQVEASREIEKMVEQLSIHIPMTLEDKQLLLAASDLMEQYERLCLILADEIEVMRIKRELQNKVKDKVDKNQKDYIMREQLKVIKEELGETSSVSDIMQYLEQLKELVASDEVKEKIKKEIERFQNVAGSNSESAVARGYVETLLSLPWDKVSEDFMDLAYAKEVLETEHYGLKKVKERVLDFLAVRQLTEKGDSPIICLVGPPGTGKTSIARSIAKALNKEYVRISLGGVRDEAEIRGHRRTYVGALPGRIITGLKQAKVKNPLMLLDEIDKMSSDYKGDTASAMLEVLDSEQNCNFVDHYVEIPVDLSEVMFIATANTTQTIPKPLLDRMEIIEVSSYTENEKFHIAKNHLLNKQIEKNGLKKSQISISEKALRKIISDYTREAGVRGLERKISEVCRKIARELLEQESKENQNLIKSAKNKSNNKNQSHSEVAAAVEAEEISVTTKPSKIKVTEKNITTYLGKPKFRNEIASQKDEVGIVCGLAWTSVGGTTLQIEVNSLPGKGALILTGQMGDVMKESAQLGISYIRSLSKEYKISEEYFQKNDIHIHIPEGATPKDGPSAGITMATAMLSAITGKKVHAKVAMTGEITLRGRVLPIGGLKEKLLAAKNTGIKKVLIPEKNRPDLEELEQEITEGMEVICVATMDEVLKHALV
SIO_010081: CPHY_RS02130
subclass of: SO_0000673
so part of: CPHY_RS02130
location: 482373..484802
location: region:482373-484802:1
so has part: feature:482373-484802:1:exon

WP_012198409.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:482373-484802:1:exon

CPHY_RS02135
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: yihA
locus tag: CPHY_RS02135
old locus tag: Cphy_0380
so part of: sequence
location: 485065..485670
location: region:485065-485670:1
so has part: feature:485065-485670:1:exon
subclass of: SO_0000010

position:485065:1
position: 485065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485670:1
position: 485670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485065-485670:1:exon

CPHY_RS02135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: yihA
locus tag: CPHY_RS02135
old locus tag: Cphy_0380
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198410.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
GO process: GO:0042254 - ribosome biogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome biogenesis GTP-binding protein YihA/YsxC
translation: MNVNQVDLETVCGVTSVLPENTQPEFAFAGKSNVGKSSLINGLMNRKSFARTSSQPGKTQTINFYHLNEKLYFVDLPGYGYAKVSSELKAKWGKMIEKYLRTSTQLKVIFLLIDIRHEPSANDKDMYEWIVHNGFEPVIIATKLDKINRSQRDKHIKMVRTGLCAGANTKILPFSSLSKEGKDDIWRCIEQFLEVPDTENK
SIO_010081: CPHY_RS02135
subclass of: SO_0000673
so part of: CPHY_RS02135
location: 485065..485670
location: region:485065-485670:1
so has part: feature:485065-485670:1:exon

WP_012198410.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:485065-485670:1:exon

CPHY_RS02140
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02140
old locus tag: Cphy_0381
so part of: sequence
location: 486104..487459
location: region:486104-487459:1
so has part: feature:486104-487459:1:exon
subclass of: SO_0000010

position:486104:1
position: 486104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:487459:1
position: 487459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486104-487459:1:exon

CPHY_RS02140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02140
old locus tag: Cphy_0381
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006858212.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MATE family efflux transporter
translation: MRMKENKDYLLKGTLWKAILMLAIPIAVNNFIQTMYNLTDSYWLGKIGTDPQSAITVVTPIQSIIVNFGTGITVAGAILISQYLGAKDEKNAKSMVGQLFASCMIFSVVCAAICFLLTPALVGWLAGGESFSSMAVTYLRIVILDMPFLFTINIFTAVNQSQGDTVRPMFLNLLGIVLNMILDPLFMLGFGWGVAGAALATLLAKVPCAIIALYSLCNNKKSLYITKESLKIQKDKLKSIAKIGLPTAIGGSTMQLGFLLMTSSVIKYGSTAVSAYGIGNRVNGLVTMPANAMGSAVATIVGQCIGARDQVRAQKAYLMARRIAVIFLFIGGLILSRNTVSEPIVRIFSNDPDVIRLGTQFLQLMAFWCFTNGIYTTTNGLHQGSGHTMINMTIDATRLWVFRLATLFICERLLHMGVQSIWYAVVVSNGISAVILWIIYKMGVWKKQVIS
SIO_010081: CPHY_RS02140
subclass of: SO_0000673
so part of: CPHY_RS02140
location: 486104..487459
location: region:486104-487459:1
so has part: feature:486104-487459:1:exon

WP_012198411.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:486104-487459:1:exon

CPHY_RS02145
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02145
old locus tag: Cphy_0382
so part of: sequence
location: 488237..489733
location: region:488237-489733:1
so has part: feature:488237-489733:1:exon
subclass of: SO_0000010

position:488237:1
position: 488237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:489733:1
position: 489733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:488237-489733:1:exon

CPHY_RS02145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02145
old locus tag: Cphy_0382
inference: COORDINATES: protein motif:HMM:NF012245.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyl-accepting chemotaxis protein
translation: METKERKFIYAEEEKRLLRTNLTNYICVMLVQIVMIALFAMDQITVEKDNINLIAIGLCFANMLIITVAFLRLKSSNRFRYIMMIGFSIVYGFVMALGANLLVFMYIFPILISLILYNDKRCIIIFSSYMAIGNVARVIIILNIEDILINKSNYILIAVLGIIITFVLIYTTLFSEVFAADAQGALKEKQLEQENMVKDILTIASTVREGSLSANQMMNQVEEDTKQMQLSLDEISSSTQSNAESIGQQTVMTQSIQSAIEEARILSSEMVAAAKDSSEVLKKSMQVVYELKDKASLIANSSEDVVDSMDLLQNKTRDVQEIAQIIFKISGQTNLLALNASIESARAGEAGRGFAVVADQIRQLAEQTKQATENISSIIAELDINAQDVSNKIHSTMDATGQQNTLIQQTSEHFAKMNENVNLLSQNVKNIDERIYELMNSNDSIVDNISQLSATSEEVSASSEMAAESSQRSIQNVISAKDHLDEVVRSAERFEAYL
SIO_010081: CPHY_RS02145
subclass of: SO_0000673
so part of: CPHY_RS02145
location: 488237..489733
location: region:488237-489733:1
so has part: feature:488237-489733:1:exon

WP_012198412.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:488237-489733:1:exon

CPHY_RS02150
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02150
old locus tag: Cphy_0383
so part of: sequence
location: complement(489955..490506)
location: region:489955-490506:-1
so has part: feature:489955-490506:-1:exon
subclass of: SO_0000010

position:489955:-1
position: 489955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:490506:-1
position: 490506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489955-490506:-1:exon

CPHY_RS02150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02150
old locus tag: Cphy_0383
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYEWKNKNIKSQFEMQKMVAKNNGVSSFTEEELSALNLKTKNFTSIHDPQVKRLVELAFIRGTLNGLQLADTQSEAVSDDKKSAVVITKQVEVQKAVNEERLYFVACKIRNRQDKVVYTNLMLKARTDAEVESMASSECSIKHQTLIQCKIIKSYGTDTMQFQFGIGTKDQTALAALGKKMLQ
SIO_010081: CPHY_RS02150
subclass of: SO_0000673
so part of: CPHY_RS02150
location: complement(489955..490506)
location: region:489955-490506:-1
so has part: feature:489955-490506:-1:exon

WP_012198413.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:489955-490506:-1:exon

CPHY_RS02155
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02155
old locus tag: Cphy_0384
so part of: sequence
location: complement(490581..491561)
location: region:490581-491561:-1
so has part: feature:490581-491561:-1:exon
subclass of: SO_0000010

position:490581:-1
position: 490581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:491561:-1
position: 491561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:490581-491561:-1:exon

CPHY_RS02155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02155
old locus tag: Cphy_0384
inference: COORDINATES: protein motif:HMM:NF023156.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aromatic acid exporter family protein
translation: MKKFNKVSKIAVGSTLAILLANAIGLNYSISAGIITLLTIQDTKKETIFISLKRLVAFMFATILALLLFPNFGFTTIPFGLFLFLFVGGCSIVKLQDGIAMNSVLATHYILSESISISMITNEALLLFIGAGIGTLINLFMPSNVAKIREVQERIEADLRKILFRMAYFLRESDKSNYKDHCFTPLKEDINLGLTYAYTNMNNTLFQESEYFIRYMEMRKHQLQILAEIYEKIISLHAVPKQVLPISQFIESIANSLAESNNAKGLLQLEKTLEEEYRQSPLPTTREEFEDRAVLFMILKDFKMFLLIKEQFADTLTKDQIQKYWS
SIO_010081: CPHY_RS02155
subclass of: SO_0000673
so part of: CPHY_RS02155
location: complement(490581..491561)
location: region:490581-491561:-1
so has part: feature:490581-491561:-1:exon

WP_012198414.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:490581-491561:-1:exon

CPHY_RS02160
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02160
old locus tag: Cphy_0385
so part of: sequence
location: 491883..494183
location: region:491883-494183:1
so has part: feature:491883-494183:1:exon
subclass of: SO_0000010

position:491883:1
position: 491883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494183:1
position: 494183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491883-494183:1:exon

CPHY_RS02160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02160
old locus tag: Cphy_0385
inference: COORDINATES: protein motif:HMM:NF024242.2
GO function: GO:0043565 - sequence-specific DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AraC family transcriptional regulator
translation: MLLRNFKLKKSSVYVVFFFSYILILIVALSCGFAYYAQITAKITKQTENTKQLLLTELRTSVESSTQYIEELCNEFTFNTKLEQFAKGLPSVTLHEAMQELTLRQKPGALLFDYFLYIKETDEIITPNIRMKADKFFDIMYSFEDIDYKEFAEQLKGNYFKNYLPIMKVNQYDKNPVEILPLIQTFPVGTKQKPLGQVIIFINAEKLFSMVEQFHVATESDVYVYNKNNVCILSSSGAPELPVELVTDKSAGNNTKDSIVFRQLSDTLGWKFIISTPKDLFYSENYEFLLRMVGVAVVYLIIGIVLVSFLAEYSYKPIREIRKYIDKNTKVDGIVKNEYEVIKTTLKEQITNGRELSDLLESQKPIVKREVLGKLLHGMVTDYSSLKERFVPLGITFTTNLFYTVALEVSEGCEFFRMDKAENDQSMILAKFISENVGVDLFQEKFNYYYLDMGQNTAVLLLNLRKEEELEEADEIVYQKVSELIQFLKKYYSLYIYTGISKQHHTLKGIQLCFDESRKALEQHKLYGGFEPYCFYELENLEADYYYPSEMEYQLLRYIKTGESDKAKQLLQSILDINARKKKISTSAARGLLFEISISLKKLFDGAMISRGKETSNLLDLDNYLKTPNLLVAFDDFCSLIDWYQKERAEVPVSNKTKRLVDSIAEFIEQNIGENWLDLNGLSSEFGVTPQYISNIFKKYKDENIKDYISKLRLAKAKELLRDTELPIKEIANQLGYVGEIGVIRLFKKYEGITPGDYRNQIHNVN
SIO_010081: CPHY_RS02160
subclass of: SO_0000673
so part of: CPHY_RS02160
location: 491883..494183
location: region:491883-494183:1
so has part: feature:491883-494183:1:exon

WP_012198415.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:491883-494183:1:exon

CPHY_RS02165
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02165
old locus tag: Cphy_0386
so part of: sequence
location: 494649..497018
location: region:494649-497018:1
so has part: feature:494649-497018:1:exon
subclass of: SO_0000010

position:494649:1
position: 494649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497018:1
position: 497018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494649-497018:1:exon

CPHY_RS02165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02165
old locus tag: Cphy_0386
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQKQSMENQGEVVQSKSVLRREVTRRQAIKTIGTGGLLIACAPFLFGKTASAASGKDKEVKGVKDVLSLTDVESLKRLTKTERKDGMIVNLLGYYGAGDGGQKSLVYLSKSKEKENGGTVHHPNDGVGAWHVLHDGIGQFRWFGIFDESIPADHALDSLVNDESFHRIEASSDLLLIKRHVFHQSNLELDFQNHIMYTYGAENANRDNPFAAMMFFQGVKVGSPITVTLPYVRNENGTLMQTDFSEDSDYLYVGNNKKFAENEWYYVETDVRPMEEVPGRLPIGGGSSDKEIQKLLRVTKVGKSASDTEYVAFNYLNAWPLKSKRKITYQKIEPVFHVNVKNLKFEGQGHSDTTGTSPVAHEFCVDCNITNIQATKVFWPLNLRRYCTQYEVRDCLLINPEEVTLGGTGYLIQQIGCLYGSVINCKAHNVRHLNDFTGCAYSLVENCHCTGDENGAFVTHGQYDHDLTYIGNSGFLSFANSALNAKDSHTWGGFHKRIVVKKHQAPRVVFENKMNRVIDMTLEDCYVYRNTERYGGNGGSVWANVDGLVMRNCVLMGPLALGEDSSMSHRPTIIEGCTIHMLDGHYLTRHRGSTYEVERDITFKNCVFKNIGQNFIVKGETIRFYDCHFYADPNAPISRLNVESKHVIISGGGFHNVCFAFDKGGTTTEAVGDQSLVVCGGAVMEGNNASGALIDIKNNARVRLDFSQAEFAPGYQMKMISHTPEDGTVSTGTLSLQMQGTTLKGTELSISESSLGKDSYIMVQSCLLKNSRLDLPSGSQCLVMNNLTL
SIO_010081: CPHY_RS02165
subclass of: SO_0000673
so part of: CPHY_RS02165
location: 494649..497018
location: region:494649-497018:1
so has part: feature:494649-497018:1:exon

WP_012198416.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:494649-497018:1:exon

CPHY_RS02170
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02170
old locus tag: Cphy_0387
so part of: sequence
location: 497116..498111
location: region:497116-498111:1
so has part: feature:497116-498111:1:exon
subclass of: SO_0000010

position:497116:1
position: 497116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498111:1
position: 498111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:497116-498111:1:exon

CPHY_RS02170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02170
old locus tag: Cphy_0387
inference: COORDINATES: protein motif:HMM:NF040368.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6273 domain-containing protein
translation: MNRKSNKLHVINRVIALLAMLCIVTGLFGNQVSAAKVTIAKELKIGQYVTFGTYNKEPILWRVIDLDKGGNPLLYAENILTYKAFDDQLWVANTAKNYGNNYWASSDLRAWLNGVGDEIAYDASGAPKSGTTKDGWNAYDEEQGFLTEFTKEEQDAIVLMKHKQLIDEVNSTASSVENKDAKLHRYESNIKDCLTNYEVARYLITEEKVFLLDIKEFYTLVYQAGFPVIKEPTKSAKEKNEAKSTLAFSPYWLRTPRASYAEETADPKYGGVSAKPDGASVRVVYGKDYILAKDAYDGSVGVIPALYLDKDYVLSQGNGTVTSPYHNQRKK
SIO_010081: CPHY_RS02170
subclass of: SO_0000673
so part of: CPHY_RS02170
location: 497116..498111
location: region:497116-498111:1
so has part: feature:497116-498111:1:exon

WP_012198417.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:497116-498111:1:exon

CPHY_RS02175
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02175
old locus tag: Cphy_0388
so part of: sequence
location: complement(498254..499144)
location: region:498254-499144:-1
so has part: feature:498254-499144:-1:exon
subclass of: SO_0000010

position:498254:-1
position: 498254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:499144:-1
position: 499144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:498254-499144:-1:exon

CPHY_RS02175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02175
old locus tag: Cphy_0388
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009323750.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Gfo/Idh/MocA family oxidoreductase
translation: MIRIGILGSDNSHALAFSKLANLPDEAGNYLYDDVRVTSIYGLDKERTQVVAREGQIDTIVEHPIDMFSHVDAVMVVFRHGNLHYKHALPFIEAGIPTWVDKPFTILPSEAIHLIDAAKKNNTLLAGGSTCKYCPDVLTLQQEFQHLHQNQSVISANFNFPGELVSPYGGIYFYGGHAIEIMTTIFGKNPISVKTDVHCGNLIALFKYEDFAVTIHFAEVSEFFATIYSGDKVITHPINISTVYRQGFQKYVDALKKGQMPEDFDSLLRPVLLLEALEKAINTGEEITIGNLRLDG
SIO_010081: CPHY_RS02175
subclass of: SO_0000673
so part of: CPHY_RS02175
location: complement(498254..499144)
location: region:498254-499144:-1
so has part: feature:498254-499144:-1:exon

WP_012198418.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:498254-499144:-1:exon

CPHY_RS02180
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02180
old locus tag: Cphy_0389
so part of: sequence
location: complement(499306..500217)
location: region:499306-500217:-1
so has part: feature:499306-500217:-1:exon
subclass of: SO_0000010

position:499306:-1
position: 499306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500217:-1
position: 500217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:499306-500217:-1:exon

CPHY_RS02180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02180
old locus tag: Cphy_0389
inference: COORDINATES: protein motif:HMM:NF013088.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EamA family transporter
translation: MITLLLVLSITFFILQSVSMKFVKADTLPQKMLVHGVFTLVAGIGMSFFLLFSRESFSLSKNTILFGILFGFLFAFTILFYNLAINSGPLSYTAFYFSSSMLLPTFFGLLFLKEELRWTLLIAIILFLMAFYFLNVTKESKKEAVSPTHRKQKKQWLFYCILTFIGNGCLAIVQKLHQQLQHGTEASGLILLGFAFASLCYFIAYPVAKSKASEVKITTSSSVKQLKTNLLPILFLAAGSLLGNLLLTSLAGKIPSSYLFPLVQGSIILGITIISTLFFKEKLSNRGKIGILLGVLAIVFINV
SIO_010081: CPHY_RS02180
subclass of: SO_0000673
so part of: CPHY_RS02180
location: complement(499306..500217)
location: region:499306-500217:-1
so has part: feature:499306-500217:-1:exon

WP_012198419.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:499306-500217:-1:exon

CPHY_RS02185
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02185
old locus tag: Cphy_0390
so part of: sequence
location: complement(500301..501620)
location: region:500301-501620:-1
so has part: feature:500301-501620:-1:exon
subclass of: SO_0000010

position:500301:-1
position: 500301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501620:-1
position: 501620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500301-501620:-1:exon

CPHY_RS02185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02185
old locus tag: Cphy_0390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011721291.1
GO function: GO:0004180 - carboxypeptidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amidohydrolase
translation: MNLIKIKALDAITKHSNKIISIGEEIFRNPELGYKEHNTSNLVKQIWEELGLEDITNVGLTGWRGYLKEKNYTATPITIAVMGELDAVISPKHPFADKQTGAAHACGHHAQIAAMIGCAIGLSAVKDALDGNVCFLATPAEEYIELGYRSQLKQDGLISYFGGKQQMIAEGVFDDVDMALMVHSETNQSKPHISINSHSTGFIGKNIRFLGKEAHAGGAPWDGVNALNAATLAISAIHAQRETFRDCDSVRVHPIITKGGDLVNTVPSEVTMESYVRAASIEAIKAANTKVNRAIKGASYAIGTDVDITDSAGYLPLMQNTRLSSIFSKNATQLLPNVTVEENLPFCGSTDAGDLSYLLPVIQPTISGFSGDLHSCDFHVEDVELAYLVPAKLMAMTVIDLLIKEASIAKEIKSASPRKKKEDYILLWNTLLKEKEEEI
SIO_010081: CPHY_RS02185
subclass of: SO_0000673
so part of: CPHY_RS02185
location: complement(500301..501620)
location: region:500301-501620:-1
so has part: feature:500301-501620:-1:exon

WP_012198420.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:500301-501620:-1:exon

CPHY_RS02190
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02190
old locus tag: Cphy_0391
so part of: sequence
location: complement(501779..502831)
location: region:501779-502831:-1
so has part: feature:501779-502831:-1:exon
subclass of: SO_0000010

position:501779:-1
position: 501779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502831:-1
position: 502831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:501779-502831:-1:exon

CPHY_RS02190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02190
old locus tag: Cphy_0391
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009323757.1
GO function: GO:0016829 - lyase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dihydrodipicolinate synthase family protein
translation: MNRQETALHNLKEGTVIPAIPLTLHSDRTFYEEGQRKLVKYYLHAGVGGVAVAVHTTQFEIRKPEINLLEPVLKVAAEEITKYEQETGKTIIRVAGACGRTEQAVSEAKLAKSLGYDAVLLSPGGLSEESEEYLIERTQAVAAILPVIGFYLQTACGGRRLSYEYWRAVADTPNVVAIKCASFNRYQTIDLVRGVAASKRSNEIALYTGNDDNIVVDLLTPYRFTMDGKQVEKRFVGGLLGHWSLWTNNVVKQFSELKKYQTESMIPSDLLSLAIEVTDCNGAFFDVANNFAGCIPGVHEILMEQGLMEGIWCLDEEEVLSKNQLEEIHRVQSMYPHLTDDEFVKSFLAK
SIO_010081: CPHY_RS02190
subclass of: SO_0000673
so part of: CPHY_RS02190
location: complement(501779..502831)
location: region:501779-502831:-1
so has part: feature:501779-502831:-1:exon

WP_012198421.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:501779-502831:-1:exon

CPHY_RS02195
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02195
old locus tag: Cphy_0392
so part of: sequence
location: complement(502831..503847)
location: region:502831-503847:-1
so has part: feature:502831-503847:-1:exon
subclass of: SO_0000010

position:503847:-1
position: 503847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:502831-503847:-1:exon

CPHY_RS02195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02195
old locus tag: Cphy_0392
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002567892.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)-dependent oxidoreductase
translation: MWTEERLDTLLTNPSSALIEDMKKITGDIMILGAGGKMGPTLSLLAKRACESAGITKRIIAVSRFSDPIVKKLLSDHQIEMISADLLEPGAIASLPKVENIIYMAGKKFGTNGNEYQTWAMNATVPSHVMEHFKDSRIVVFSTGNIYPKVAIYSGGATEETHPEPVGEYAMSSLSRERIFEYGANTYGTKLAIYRLNYAVDLRYGVLYDIAENIMNDRPISLESPCFNCIWQGDANEVAIRLLLHADSSVFRLNVTGPETIGVKETALKLAKKLGKEVSFVGEESSTAYLNNASKMTELFGYPTVSINTLIDWQAEWILSGGRSLGKPTHFEERKGNF
SIO_010081: CPHY_RS02195
subclass of: SO_0000673
so part of: CPHY_RS02195
location: complement(502831..503847)
location: region:502831-503847:-1
so has part: feature:502831-503847:-1:exon

WP_012198422.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:502831-503847:-1:exon

CPHY_RS02200
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02200
old locus tag: Cphy_0393
so part of: sequence
location: 504230..505210
location: region:504230-505210:1
so has part: feature:504230-505210:1:exon
subclass of: SO_0000010

position:504230:1
position: 504230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505210:1
position: 505210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504230-505210:1:exon

CPHY_RS02200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02200
old locus tag: Cphy_0393
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010168442.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease subunit
translation: MGLKRDKRKDGRARPSKEVRARMRHQSRVLIKRNWALYLFILPAFLYFLIFAYAPMYGVQIAFKDFIATKGFGGSPWADPIYKHFKTFFSSVNFSQIFMNTITLSLYYMAVSFVTPILLALMINEVGNKYFKKTVQNITYMPYFISTVVLVGMIDLFLSRNGLFNQIGAALFHSEPTMFLMKDSLFNDIYVWSGVWQVTGYGAVIYIAALSGVSPELHEAAIMDGAGRMQRIRHINLPAIMPTIVVMLIMTVGGIMNLSFEKVLLMQKDGNMMVSEVISTYVYKLGIQRAQYSLSSAVGLFNNVINLILLVTVNKISRKVSENSLW
SIO_010081: CPHY_RS02200
subclass of: SO_0000673
so part of: CPHY_RS02200
location: 504230..505210
location: region:504230-505210:1
so has part: feature:504230-505210:1:exon

WP_012198423.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:504230-505210:1:exon

CPHY_RS02205
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02205
old locus tag: Cphy_0394
so part of: sequence
location: 505226..506137
location: region:505226-506137:1
so has part: feature:505226-506137:1:exon
subclass of: SO_0000010

position:505226:1
position: 505226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506137:1
position: 506137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:505226-506137:1:exon

CPHY_RS02205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02205
old locus tag: Cphy_0394
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009250840.1
GO process: GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbohydrate ABC transporter permease
translation: MKRKNKMKQSRGDKIFVIVNYTLLTVILLLCLYPLWFVMISSVSNPDLVNSGKVWLLPKEISFTGYKNLFHDKSIIRGYINTLIYTGGGTMLNLAVTLPAAYALSRKDFVGRKFFTLMFLFTMFFSGGLIPTFMTVKNLGLYNSPWVMVILGATSMTNIIISRTFFMTNIPNELHEAAQIDGCGNVRLFLQVVLPISTAICAVMALFFAVNHWNGYFTALIYIRDDRYKPLQIIMREVLMRSKFNAEMLQQGGDSAGLLQEELRAAEQIKYALIVIASLPVMAIYPFIQKYFVKGVTVGAVKG
SIO_010081: CPHY_RS02205
subclass of: SO_0000673
so part of: CPHY_RS02205
location: 505226..506137
location: region:505226-506137:1
so has part: feature:505226-506137:1:exon

WP_012198424.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:505226-506137:1:exon

CPHY_RS02210
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02210
old locus tag: Cphy_0395
so part of: sequence
location: 506211..507890
location: region:506211-507890:1
so has part: feature:506211-507890:1:exon
subclass of: SO_0000010

position:506211:1
position: 506211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507890:1
position: 507890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:506211-507890:1:exon

CPHY_RS02210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02210
old locus tag: Cphy_0395
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009323766.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MKFKKLVAMGLCTCLAVTLLAGCGKKNEDQANNNVTATPSEGQSTPSGGDSGKDEMPENVNAVGVYPIVKEPITLKIMGRKDPGATDWGELEVFKRLTKITNINFEFELSEGDTFVEQKNIALVGGEYPDLILRADTSSITDEETYGPQGVFLDLTDLIDKYAPNIKALLQERPDIKAAITSMDGKIYGLPYAFQTATTQGHTGFFDSKWMDNVGITKVPETTDELYDMLVKFKEMDANGNGDLNDEIPFSCSGLNTTIRRLLIPAFTGTAEGLGFDIKNGEVVYAPALPEYKEFLIYTNKLYSEGLLDPEFSTQTSQQWQAKVKAGMCGVYSASPTLLDPEVTITQQLSLPPLTSSTNDKKVVIQPDNLYPARGFITDKCKDPVAAIRLLDMFYATPENAVEGFSGQTLFLGWEGEHWEYTNGMKDFYRWIDPITGFGDINKSISVNMELPGYLNFTAGPAGNPLMEMKVEQVNNMQKPYYTTAYPINARFTADESERGNVIENDLYTYVTMMTTKFIIGEVSIDKFDEYIDTLNKTGLPELLEIKRAALARWNEAMN
SIO_010081: CPHY_RS02210
subclass of: SO_0000673
so part of: CPHY_RS02210
location: 506211..507890
location: region:506211-507890:1
so has part: feature:506211-507890:1:exon

WP_012198425.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:506211-507890:1:exon

CPHY_RS02215
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02215
old locus tag: Cphy_0396
so part of: sequence
location: 507971..509302
location: region:507971-509302:1
so has part: feature:507971-509302:1:exon
subclass of: SO_0000010

position:507971:1
position: 507971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509302:1
position: 509302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507971-509302:1:exon

CPHY_RS02215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02215
old locus tag: Cphy_0396
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009323768.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQKEKTSFETDFSRFGILDGSVSADTALEEMLSDETIRVIHAYTPLNFTKRHLIKRSNITFDFHGNMVTAIGIEHANHNDPFSALFHITGERLSDIRSVSLSHPLQELYDIFEVDDSDQFELDSWWIVTCNALCGREEKEIDKMLQVTEIIDKTHVRFNYKMGWPFEAGRVLTYQKVKPIFDVSVNNMRFTGNQEGEETGVEPLAYEYAVNCNASNIHARFTYWPVILRRHNTGYVTERCSLHNPIEVVVGGTGYLTQQIHCLYGKVRDCEASNARHLNDFTGSAYCMVENCHGDGDFHGAFVTHGQFEHDLTYTGNSGLLSFANSGPTWGSSAKRITVIRHVGCWGLAFAKVSDLTLQDVVIQKTEKYEECGNLLLNADGLQVRGCTAERLVLTQRSNRSKRPVVIENSYFTEGVEITKTGEAAVKTKIRIINTIDKDGKEC
SIO_010081: CPHY_RS02215
subclass of: SO_0000673
so part of: CPHY_RS02215
location: 507971..509302
location: region:507971-509302:1
so has part: feature:507971-509302:1:exon

WP_012198426.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:507971-509302:1:exon

CPHY_RS02220
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02220
old locus tag: Cphy_0397
so part of: sequence
location: 509392..510393
location: region:509392-510393:1
so has part: feature:509392-510393:1:exon
subclass of: SO_0000010

position:509392:1
position: 509392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:510393:1
position: 510393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:509392-510393:1:exon

CPHY_RS02220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02220
old locus tag: Cphy_0397
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009323770.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydroxyacid dehydrogenase
translation: MLNILVTIPTLSAVFPTFFDDKRKRELESIGNVIWNVSDKQFSKEEFTEKLKDIDICVTGWGTPVMEEEVLTYANRLRFIAHTGGSVKPYVTDACYERGIRVVSGNSVFAESVAEGVIAYALSSLRDIPRFSYELKQGIWPAQFYNRGLLERKVGIVGYGMIARYVVSMLKPFHCGIKVYSRHIANEELEQHQMEKATLDEIFSTCDIISIHSGMTPENHHLITEELLNQMKPGALLINTARGAIIDEEALIKVLDKKEIYAALDVYETEPLPSDHPLLECENALLLPHMGGPTIDRRLSVTSSVITDIHNFIDEKPLLCEISASYAAKMSMY
SIO_010081: CPHY_RS02220
subclass of: SO_0000673
so part of: CPHY_RS02220
location: 509392..510393
location: region:509392-510393:1
so has part: feature:509392-510393:1:exon

WP_012198427.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:509392-510393:1:exon

CPHY_RS02225
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02225
old locus tag: Cphy_0398
so part of: sequence
location: 510532..511797
location: region:510532-511797:1
so has part: feature:510532-511797:1:exon
subclass of: SO_0000010

position:510532:1
position: 510532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:511797:1
position: 511797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510532-511797:1:exon

CPHY_RS02225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02225
old locus tag: Cphy_0398
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004629077.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Gfo/Idh/MocA family oxidoreductase
translation: MEKIKLALVGAGERGQNSYAPYAKLHGYEIEFVAVAEPDFGRREQFCKDYGVSKEHAYESAEDFLSQGKIADAVLICTQDKDHFDYACTAIHLGYDILLEKPISPDPLECIQLEELAVKHGTTIVVCHVMRYTKFYRKIKEIMESGVIGDVVSITHTENVAYWHYAHSYVRGNWHRREDSSPMILAKCCHDMDILAWLLDSRCKSISSYGDLTYFKEENAPVGSPKRCMDGCPHSSTCPYYAPKIYLTEDTKWPTSCLGTDTSYEARKKALQEGPYGVCVFHNDNDVVDHQVASILFENGVTVAFTMCAFSNACDRTIKFMGTKGEIRASMEKNTIEVTEFGQGIMTGTTNVYTLIPGDTGHSGGDEGIMEEFVSILKGVRKNTNTISQSVHSHIMAFAAEESRLQGKTIEIVDYEKKFRS
SIO_010081: CPHY_RS02225
subclass of: SO_0000673
so part of: CPHY_RS02225
location: 510532..511797
location: region:510532-511797:1
so has part: feature:510532-511797:1:exon

WP_012198428.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:510532-511797:1:exon

CPHY_RS02230
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02230
old locus tag: Cphy_0399
so part of: sequence
location: 511866..513032
location: region:511866-513032:1
so has part: feature:511866-513032:1:exon
subclass of: SO_0000010

position:511866:1
position: 511866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513032:1
position: 513032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511866-513032:1:exon

CPHY_RS02230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02230
old locus tag: Cphy_0399
inference: COORDINATES: protein motif:HMM:NF024917.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MEYKTGNGYPIEKFIEFGNEVFGDEVLPGGFECLLPKLKKDTELPKHFRVIEEEGELKAMLLSLPLTLNVYDQMLSIRYIGLVAVHESARGKGYMTFLMEQVIKEMKEEKTMLSVLGGQRQRYEYFGYEPAGLEFHCAVNKTNLKHSMLSKPMDSGITIDLLKQESVEVGQAYKLFMCIPVRTLREEDSFYELLQSWRSTPYVIYKDGDFKGYLSVSVEGETGQIRELYRKDDSVSITDICYLCMEKCKVEKLEFALSLPEIKKDKELQNLCETYEITCNHSFCVFDFEAVIKAYLPFLSQTNTVLEGEARFYIEDELYTICVDEGYQTVRRESTLRDVKLKDVPSYTHKEAVRLLFTPLSSLQGNENSEELRKWFPLPLYLSILDAC
SIO_010081: CPHY_RS02230
subclass of: SO_0000673
so part of: CPHY_RS02230
location: 511866..513032
location: region:511866-513032:1
so has part: feature:511866-513032:1:exon

WP_012198429.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:511866-513032:1:exon

CPHY_RS20500
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS20500
old locus tag: Cphy_0400
so part of: sequence
location: 513123..513443
location: region:513123-513443:1
so has part: feature:513123-513443:1:exon
subclass of: SO_0000010

position:513123:1
position: 513123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513443:1
position: 513443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513123-513443:1:exon

CPHY_RS20500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS20500
old locus tag: Cphy_0400
inference: COORDINATES: protein motif:HMM:NF014470.2
GO process: GO:0015031 - protein transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: twin-arginine translocase TatA/TatE family subunit
translation: MFNIGLSEFLLLLLIAFLVVGPKDLPKIARAIGKGVRYLGNLKEEFGEILNIEEEINAVKNDFEEIKDITKEAEQASRDIIDVMNEAKKDLKDIDGAISEAKSVVE
SIO_010081: CPHY_RS20500
subclass of: SO_0000673
so part of: CPHY_RS20500
location: 513123..513443
location: region:513123-513443:1
so has part: feature:513123-513443:1:exon

WP_012198430.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:513123-513443:1:exon

CPHY_RS02240
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02240
old locus tag: Cphy_0401
so part of: sequence
location: 513617..513796
location: region:513617-513796:1
so has part: feature:513617-513796:1:exon
subclass of: SO_0000010

position:513617:1
position: 513617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513796:1
position: 513796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513617-513796:1:exon

CPHY_RS02240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02240
old locus tag: Cphy_0401
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005339603.1
GO process: GO:0015031 - protein transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: twin-arginine translocase TatA/TatE family subunit
translation: MRIGTTEVLLILALALVLFGGGKLAGVGKALGTSIKEFKKEVHSEDSISEAKGNSSHEN
SIO_010081: CPHY_RS02240
subclass of: SO_0000673
so part of: CPHY_RS02240
location: 513617..513796
location: region:513617-513796:1
so has part: feature:513617-513796:1:exon

WP_012198431.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:513617-513796:1:exon

CPHY_RS02245
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: tatC
locus tag: CPHY_RS02245
old locus tag: Cphy_0402
so part of: sequence
location: 513786..514592
location: region:513786-514592:1
so has part: feature:513786-514592:1:exon
subclass of: SO_0000010

position:513786:1
position: 513786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:514592:1
position: 514592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513786-514592:1:exon

CPHY_RS02245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: tatC
locus tag: CPHY_RS02245
old locus tag: Cphy_0402
inference: COORDINATES: protein motif:HMM:TIGR00945.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO process: GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: twin-arginine translocase subunit TatC
translation: MKTKRMEKRNQGYMDSKELGESKTLMEHLLDFRKVLIFSTAVIVLFFLVIWLCCSEWLLNIVAKPLIDRNITIVYTAIAESFSAQMKVSFLFAVILAFPFVLGKLWRFVAPSLYRREKFVYGGVFFIVLLLFVLGILFAYLIVFHMAINFFVFSSGALAKPMISIESYVGFMIRFMIPFGITFELPLVILILTKLQIVKLSQLMKSQKYVILLLFVLAAILTPPDVISQIMLGLPLTLLYEIGVLGAAIVTARRKRRESYEAESCSQA
SIO_010081: CPHY_RS02245
subclass of: SO_0000673
so part of: CPHY_RS02245
location: 513786..514592
location: region:513786-514592:1
so has part: feature:513786-514592:1:exon

WP_012198432.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:513786-514592:1:exon

CPHY_RS02250
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02250
old locus tag: Cphy_0403
so part of: sequence
location: 514812..515024
location: region:514812-515024:1
so has part: feature:514812-515024:1:exon
subclass of: SO_0000010

position:514812:1
position: 514812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515024:1
position: 515024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:514812-515024:1:exon

CPHY_RS02250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02250
old locus tag: Cphy_0403
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004614029.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4Fe-4S binding protein
translation: MLPKVKRKAEVVKNHCVACGVCANVCPKDASTIYRGIYAVVNEELCVGCSKCSKACPAGTIRMIEREVSQ
SIO_010081: CPHY_RS02250
subclass of: SO_0000673
so part of: CPHY_RS02250
location: 514812..515024
location: region:514812-515024:1
so has part: feature:514812-515024:1:exon

WP_012198433.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:514812-515024:1:exon

CPHY_RS02255
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02255
old locus tag: Cphy_0404
so part of: sequence
location: 515021..515602
location: region:515021-515602:1
so has part: feature:515021-515602:1:exon
subclass of: SO_0000010

position:515021:1
position: 515021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515602:1
position: 515602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:515021-515602:1:exon

CPHY_RS02255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02255
old locus tag: Cphy_0404
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016206981.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4Fe-4S binding protein
translation: MKMKQQTKWYEKLWIASSIYLILSPFNILFAWLGLLCFFIPLLISMFKGSKVYCNRYCGRGQLLTILGDRFKLSRNKATPRWMRSNYFRYGFLIFFLTMFVNMLMNTYYVLRGAKGLKQVITILWTFKLPWNFATYSYASSWIVQFGFGFYSIMLTSTILGLITMLLYKPRSWCVYCPMGTMTQGICKLKDKM
SIO_010081: CPHY_RS02255
subclass of: SO_0000673
so part of: CPHY_RS02255
location: 515021..515602
location: region:515021-515602:1
so has part: feature:515021-515602:1:exon

WP_012198434.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:515021-515602:1:exon

CPHY_RS02260
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02260
old locus tag: Cphy_0405
so part of: sequence
location: 515791..516495
location: region:515791-516495:1
so has part: feature:515791-516495:1:exon
subclass of: SO_0000010

position:515791:1
position: 515791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516495:1
position: 516495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:515791-516495:1:exon

CPHY_RS02260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02260
old locus tag: Cphy_0405
EC number: 3.-.-.-
inference: COORDINATES: protein motif:HMM:NF013672.2
GO function: GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polysaccharide deacetylase family protein
translation: MSVGYLTMDDGPSDITRDIIDYLTGRGIKPVFFFTGQNIEKRMEEGVYAIKKGAIIGNHSYSHPNFEQLTLEQCISEVEKTEELINELYKKAGEVRKFKLFRFPYGARKLNESKEFQEYLKNQRFCKLDDMHITSEWYDREGLIEGVDVLWTYDFTEYRIQNDTSLTYDDLVARIHEKKQGSSDSLLNEGSRHIVLLHDHEETNAVISRYYQKFLDYVMLHGVDFIEPEFRYLS
SIO_010081: CPHY_RS02260
subclass of: SO_0000673
so part of: CPHY_RS02260
location: 515791..516495
location: region:515791-516495:1
so has part: feature:515791-516495:1:exon

WP_012198435.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:515791-516495:1:exon

CPHY_RS02265
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02265
old locus tag: Cphy_0406
so part of: sequence
location: complement(516832..517254)
location: region:516832-517254:-1
so has part: feature:516832-517254:-1:exon
subclass of: SO_0000010

position:516832:-1
position: 516832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:517254:-1
position: 517254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516832-517254:-1:exon

CPHY_RS02265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02265
old locus tag: Cphy_0406
EC number: 2.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008977197.1
GO function: GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HIT family protein
translation: MLDPNCAYCAEGELVAKFGIKICELPASKVYLFKEQSHKGRCIVASKFHVSEMIELSEEERNAFFADVNKVANAIHNAFHPDKVNYGAYGDTGHHLHFHLVPKYKDEFEWGGTFAMDPKQKTLSDQEYEELIETLKANLK
SIO_010081: CPHY_RS02265
subclass of: SO_0000673
so part of: CPHY_RS02265
location: complement(516832..517254)
location: region:516832-517254:-1
so has part: feature:516832-517254:-1:exon

WP_012198436.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:516832-517254:-1:exon

CPHY_RS02270
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02270
old locus tag: Cphy_0407
so part of: sequence
location: complement(517327..517848)
location: region:517327-517848:-1
so has part: feature:517327-517848:-1:exon
subclass of: SO_0000010

position:517327:-1
position: 517327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:517848:-1
position: 517848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517327-517848:-1:exon

CPHY_RS02270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02270
old locus tag: Cphy_0407
inference: COORDINATES: protein motif:HMM:NF025635.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4364 family protein
translation: MQAETLMLYKLIVLYILDKVDFPLTNGQLTNFILEKEYTNYFSIQQTISELIDDQYISAETIRNSSLYQITDSGKETLSFFCNTIAQAIRDDIDIYLKEHKYSLREEVSTLADYFEVKKDEFITHLRVMEGSSAIIDLKLSVPTEREANLICNNWKQKSSDIYTYVISSLIAD
SIO_010081: CPHY_RS02270
subclass of: SO_0000673
so part of: CPHY_RS02270
location: complement(517327..517848)
location: region:517327-517848:-1
so has part: feature:517327-517848:-1:exon

WP_012198437.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:517327-517848:-1:exon

CPHY_RS02275
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02275
old locus tag: Cphy_0408
so part of: sequence
location: complement(517863..518804)
location: region:517863-518804:-1
so has part: feature:517863-518804:-1:exon
subclass of: SO_0000010

position:517863:-1
position: 517863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518804:-1
position: 518804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517863-518804:-1:exon

CPHY_RS02275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02275
old locus tag: Cphy_0408
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018594203.1
GO function: GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
note: This family includes YhcC from E. coli K-12, an uncharacterized radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TIGR01212 family radical SAM protein
translation: MNLWQGKRYYSLDAYYKEQFGDKIYKLSLNGGMTCPNRDGNLGTGGCIFCSSGGSGDFATSMKLSITEQIEAAKERVAKKAKSNRYVAYFQAYTNTYAPVDYLRSIFTEAMGHEDIVALSIATRPDCFPDEVLRLLAELNQRKPIYIELGLQTIHENSAKLIRRGYTLPIFEDALNRLSNLNIPVIVHVILGLPGESREMMLSTIDYLAKLPIHGIKLQLMHILKNTDLETFYRKEPTLFSLLQLEDYINALVECLEHLPPHIVIHRITGDGPKNLLIAPLWSGNKRNVLNTIQKELKERNSYQGKYIRTNLE
SIO_010081: CPHY_RS02275
subclass of: SO_0000673
so part of: CPHY_RS02275
location: complement(517863..518804)
location: region:517863-518804:-1
so has part: feature:517863-518804:-1:exon

WP_012198438.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:517863-518804:-1:exon

CPHY_RS02280
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02280
old locus tag: Cphy_0409
so part of: sequence
location: complement(518974..520125)
location: region:518974-520125:-1
so has part: feature:518974-520125:-1:exon
subclass of: SO_0000010

position:518974:-1
position: 518974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:520125:-1
position: 520125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:518974-520125:-1:exon

CPHY_RS02280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02280
old locus tag: Cphy_0409
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009243889.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADP-dependent malic enzyme
translation: MTLNEKALKLHEEWNGKLETTSKCQVKSREDLALAYTPGVAEPCKVIANDSEAAYRYTIKANTVAVVSDGSAVLGLGNIGAHAAMPVMEGKCVLFKEFGGVNAFPICLDTQDTEEIIKTIIHIAPAFGGINLEDISAPRCFEIEARLKEQLSIPVFHDDQHGTAIVVLAGIINALKVTNKKKEDCRVVVNGAGSAGIAITKLLLNYGFCHLTLCDKVGILSNQTENLNWMQKEMMEVTNLEGATGTLADALKGTDIFIGVSAPNIVAPEMVSSMNKDSILFAMANPVPEIMPDLAKEAGAKVVGTGRSDFPNQVNNVIAFPGIFKGALEGRATQITEEMKLGAAKAIADLVSNEELNEDYIIPEAFDERVCEVVSNAVKAYIK
SIO_010081: CPHY_RS02280
subclass of: SO_0000673
so part of: CPHY_RS02280
location: complement(518974..520125)
location: region:518974-520125:-1
so has part: feature:518974-520125:-1:exon

WP_012198439.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:518974-520125:-1:exon

CPHY_RS02285
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: rho
locus tag: CPHY_RS02285
old locus tag: Cphy_0410
so part of: sequence
location: 520544..522496
location: region:520544-522496:1
so has part: feature:520544-522496:1:exon
subclass of: SO_0000010

position:520544:1
position: 520544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522496:1
position: 522496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:520544-522496:1:exon

CPHY_RS02285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: rho
locus tag: CPHY_RS02285
old locus tag: Cphy_0410
EC number: 3.6.4.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008400607.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0006353 - DNA-templated transcription termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription termination factor Rho
translation: MSNLYETKSLSELRDIAKEKGLKSISALRKQELIDALNALEKGQGSVASINKSTDDKPIKLGTEEVKLATEDTKQSVENRGMESSHMQGNRNNVIRRLPEQNRQHELVKAPDQSKGNDNSRMSESYRSNEGRNMDNRLENRNNDNKNNDNRNNENRNNENRNYENSRNYENRSNENRNNENRNNENRNNENRSNEMLRNYDNNRRTMDNRRPMDNRRLNENRGYNESDRVVRINPTGDISGNQATELGYNTTSSSDRFLSQANQQEEKLPIDMEQLDSGETKEGILEVLSDGYGFIRCDNFLPGENDVYVSPAQIRRFNLKTGDIIVGNTRIRNQNEKFSALLYIKLINGLHPSEAVKRKKFEDLTPIFPNERIHLETPGCQVAMRMVDLISPIGKGQRGMIVSQPKTGKTTLLKQVAKAITRNHPEMHLIILLIDERPEEVTDIKESIEGGNVEVIYSTFDELPENHKRVSEMVIERAKRLVEHKKDVVILLDSITRLARAYNLTVQASGRTLSGGLDPAALHMPKKFFGAARNMREGGSLTILATALVETGSRMDDVVFEEFKGTGNMELVLDRNLSEKRIFPAIDLPKSSTRRDDLLLNSAEVEANYLMRKALNGLKSEDAVERIIQMFVNTKNNAEFVEMIKKTKI
SIO_010081: CPHY_RS02285
subclass of: SO_0000673
so part of: CPHY_RS02285
location: 520544..522496
location: region:520544-522496:1
so has part: feature:520544-522496:1:exon

WP_012198440.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:520544-522496:1:exon

CPHY_RS02290
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: rpmE
locus tag: CPHY_RS02290
old locus tag: Cphy_0411
so part of: sequence
location: 522673..522876
location: region:522673-522876:1
so has part: feature:522673-522876:1:exon
subclass of: SO_0000010

position:522673:1
position: 522673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522876:1
position: 522876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:522673-522876:1:exon

CPHY_RS02290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: rpmE
locus tag: CPHY_RS02290
old locus tag: Cphy_0411
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002568352.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L31
translation: MQEAIQPKYYQAKVTCNCGNEFVTGSTKPEIHVEVCSKCHSFYTGQQKAAAARGAIDKFNRKYGLNN
SIO_010081: CPHY_RS02290
subclass of: SO_0000673
so part of: CPHY_RS02290
location: 522673..522876
location: region:522673-522876:1
so has part: feature:522673-522876:1:exon

WP_029502121.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:522673-522876:1:exon

CPHY_RS22025
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS22025
pseudo: true
so part of: sequence
location: 522996..>523880
location: region:522996-523880:1
so has part: feature:522996-523880:1:exon
subclass of: SO_0000010

position:522996:1
position: 522996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:523880:1
position: 523880
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:522996-523880:1:exon

CPHY_RS22025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS22025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005603943.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF1385 domain-containing protein
SIO_010081: CPHY_RS22025
subclass of: SO_0000673
so part of: CPHY_RS22025
location: 522996..>523880
location: region:522996-523880:1
so has part: feature:522996-523880:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:522996-523880:1:exon

CPHY_RS02300
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: prmC
locus tag: CPHY_RS02300
old locus tag: Cphy_0413
so part of: sequence
location: 524625..525464
location: region:524625-525464:1
so has part: feature:524625-525464:1:exon
subclass of: SO_0000010

position:524625:1
position: 524625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:525464:1
position: 525464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:524625-525464:1:exon

CPHY_RS02300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: prmC
locus tag: CPHY_RS02300
old locus tag: Cphy_0413
EC number: 2.1.1.297
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015512715.1
GO function: GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO process: GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide chain release factor N(5)-glutamine methyltransferase
translation: MSKITYESALREGCTLLQASSIQDAELDAWYLLEHVTGLRRIDYMIRAKEDMSIEVYERYQQLLKKRALHIPLQYLTGSQEFMGLSFRVNESVLIPRQDTERLVEEVLKVSKDKDVLELCTGSGCIIISLAKLGNIKNAVAVDISSDAIKVAKENAKDNEVLVTYLLSDMFSNVSGTYDVIVSNPPYIESEVIEGLMPEVKDHEPRIALDGDADGLKFYRILAKESGRFLNKNGRLYLEIGCNQAAFIGELLSQNGFAQIKVVKDYAGLDRVVSAVYEG
SIO_010081: CPHY_RS02300
subclass of: SO_0000673
so part of: CPHY_RS02300
location: 524625..525464
location: region:524625-525464:1
so has part: feature:524625-525464:1:exon

WP_012198443.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:524625-525464:1:exon

CPHY_RS02305
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: prfA
locus tag: CPHY_RS02305
old locus tag: Cphy_0414
so part of: sequence
location: 525835..526911
location: region:525835-526911:1
so has part: feature:525835-526911:1:exon
subclass of: SO_0000010

position:525835:1
position: 525835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526911:1
position: 526911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:525835-526911:1:exon

CPHY_RS02305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: prfA
locus tag: CPHY_RS02305
old locus tag: Cphy_0414
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198444.1
GO function: GO:0016149 - translation release factor activity, codon specific [Evidence IEA]
GO process: GO:0006415 - translational termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide chain release factor 1
translation: MFDKLEDLLIRFQEIQNELNEPTVTNDQARFRKLMKEQNDLGEIVDKYLEYKQTKKNIEESLELLDEESDEEMRELAKEELSTSKANLVVIEEQLKILLLPKDPNDSKNVIVEIRGGAGGDEAALFAAELFRMYSKYAETMRWKIDMMNLNENGIGGFKEVIFMINGQGAYSKLKYESGVHRVQRIPVTESGGRIHTSTVTVAIMPEAEEVDVELNMNDCRFDVFRSSGNGGQCVNTTDSAVRLTHMPTGIVISCQDEKSQLKNRDKALKVLRARLYELELEKAHDAEAAARKSQVGTGDRSEKIRTYNFPQGRCTDHRIKLTSHRLDDIMNGDLQEVIDSLTAADQAAKLSNMQDEY
SIO_010081: CPHY_RS02305
subclass of: SO_0000673
so part of: CPHY_RS02305
location: 525835..526911
location: region:525835-526911:1
so has part: feature:525835-526911:1:exon

WP_012198444.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:525835-526911:1:exon

CPHY_RS02310
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02310
old locus tag: Cphy_0415
so part of: sequence
location: 527112..528479
location: region:527112-528479:1
so has part: feature:527112-528479:1:exon
subclass of: SO_0000010

position:527112:1
position: 527112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528479:1
position: 528479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527112-528479:1:exon

CPHY_RS02310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02310
old locus tag: Cphy_0415
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018597109.1
GO function: GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO process: GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: potassium transporter TrkG
translation: MFQKKRRFSTTRMIATGFLAGIMLGALLLSLPIATKAGIVTPLEDSFFTATTSICVTGLTTVTTGEHWSFFGQLVILLLIQFGGLGVVTFTTTIFLLLGKRVKLSDRLVIQNAYNIDTLSGLVKLTKKIIKFTLIVEGIGAFCYLFQFVPEFGVVDGVWYSIFHAVSAFCNAGIDLVGGNSFIPYRDNLWINLVTMGLIVLGGIGFPVWWDVFHISKQAVKKDIKVRSMFRRLTLHSKIAITVTVVMIVLGAVLTFILEFNNPATIGELSIGKKMLSSLFQSVTTRTAGFATIPQQNFKDATSIVYLVWMFIGGSPSGTAGGIKTVTVAVILLSTISIVRGKKDIEIFQRRISDQYLKKGLAVVMVSFLVLMVTTISLSAIQNSSFLDTLYETTSAIGTVGLTRNMTGSLMTAGKIIVMITMYLGRIGPITMALAINAGKHQGEKSLPEGKILVG
SIO_010081: CPHY_RS02310
subclass of: SO_0000673
so part of: CPHY_RS02310
location: 527112..528479
location: region:527112-528479:1
so has part: feature:527112-528479:1:exon

WP_012198445.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:527112-528479:1:exon

CPHY_RS02315
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02315
old locus tag: Cphy_0416
so part of: sequence
location: 528520..529173
location: region:528520-529173:1
so has part: feature:528520-529173:1:exon
subclass of: SO_0000010

position:528520:1
position: 528520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:529173:1
position: 529173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:528520-529173:1:exon

CPHY_RS02315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02315
old locus tag: Cphy_0416
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008908024.1
GO process: GO:0006813 - potassium ion transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrkA family potassium uptake protein
translation: MARKEFVVFGLGRFGKSVATTLAEGGCEVMVVDNDEDKIHEIADYVTYAVRADVTEAESLESLGLRNFDGAVIAIGENLEASVMVTILVKELGVPYVLAKAQNELHAKVLKKVGADMVVFPEKETGIRIANNLMMGNFFDAIELSSTSSMMELDILQEWIGHSLRELNLRAKNKINVIGIKRDDQLNINPDADMPLERNDVLVIIGKNEILNKLANQ
SIO_010081: CPHY_RS02315
subclass of: SO_0000673
so part of: CPHY_RS02315
location: 528520..529173
location: region:528520-529173:1
so has part: feature:528520-529173:1:exon

WP_012198446.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:528520-529173:1:exon

CPHY_RS02320
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02320
old locus tag: Cphy_0417
so part of: sequence
location: 529257..530051
location: region:529257-530051:1
so has part: feature:529257-530051:1:exon
subclass of: SO_0000010

position:529257:1
position: 529257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:530051:1
position: 530051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529257-530051:1:exon

CPHY_RS02320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02320
old locus tag: Cphy_0417
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014078891.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA methyltransferase
translation: MITSSSNSQIKNLIKLQKQSKVRNELKVFVCEGKKMFEEVASQQRNQIKKVYLAESYYHQYTKQNPEYLKGLDFEVLSDQVMKEASETITPQGILAIVKQPIYTLKDMTSGDSIRLLLLEDIRDPGNLGTMVRTAEGVGMTGIVLSKDSVDMFNPKVIRSTMGAIFRVPFFYAEDFYACLNQIKNEEIAIYAAHLQGAVWYDKVSYQGKSAILIGNEANGLSDKATSLSTQRIKIPMEGNVESLNAAIAAAVLMYESYRQIRNH
SIO_010081: CPHY_RS02320
subclass of: SO_0000673
so part of: CPHY_RS02320
location: 529257..530051
location: region:529257-530051:1
so has part: feature:529257-530051:1:exon

WP_012198447.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:529257-530051:1:exon

CPHY_RS02325
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02325
old locus tag: Cphy_0418
so part of: sequence
location: 531156..532223
location: region:531156-532223:1
so has part: feature:531156-532223:1:exon
subclass of: SO_0000010

position:531156:1
position: 531156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:532223:1
position: 532223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531156-532223:1:exon

CPHY_RS02325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02325
old locus tag: Cphy_0418
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTPVKVVNPRPVVVKQALSKSAPLKVEKEFENKIDKKEDKIDKKEQKNQLKLLKTMEMEREKELREEKKRLEALSKESTKEKKKEDKKIAKLDKKNEKLALKESFKQEKFQKKEELEQAKLQAFHEERQEKLAKKEEKKQVKQGKKQSKIDASIAKKEQKEKEKDLEKQALMAKQQEREEKKQAILERKATIKQEKIDKKEENRLAKLKAKEDAKISKYVHKQQKLQEKIAKASNPNVNMMEKEEKSNGSKVSQKAYMEKMRLKEEKQRSQVRLEEERRIKALNSEKNANLPETNLYEAAQDIIDELVKQKKEDSINLKQAMENESEMKQEANECLATSKEDDELIEEVLREFFM
SIO_010081: CPHY_RS02325
subclass of: SO_0000673
so part of: CPHY_RS02325
location: 531156..532223
location: region:531156-532223:1
so has part: feature:531156-532223:1:exon

WP_157668638.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:531156-532223:1:exon

CPHY_RS02330
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02330
old locus tag: Cphy_0419
so part of: sequence
location: 532429..533778
location: region:532429-533778:1
so has part: feature:532429-533778:1:exon
subclass of: SO_0000010

position:532429:1
position: 532429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:533778:1
position: 533778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:532429-533778:1:exon

CPHY_RS02330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02330
old locus tag: Cphy_0419
EC number: 5.3.1.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198449.1
GO function: GO:0004347 - glucose-6-phosphate isomerase activity [Evidence IEA]
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glucose-6-phosphate isomerase
translation: MAKVNFDYSIAKQFFSKEELSYMKGAAEAAKQILLEKTGAGNDFLGWIDLPVDYDKEEFERIITSAKKIQSDSEVLLVIGIGGSYLGARAAIEFLRHSFYNSVSKEVRKTPEIYYVGNNISSTYLSHLIEVIGDRDFSVNIISKSGTTTEPAIAFRIFKKLLIQKYGKVEAAKRIYATTDKSKGALKNLATEEGYESFVVPDDVGGRFSVLTAVGLLPIAVSGADIKQLMDGAASMRERCLNNKFEENDSLLYASIRNILLRKGKNIEILANYEPALHYVGEWWKQLYGESEGKDKKGIFPASVDLTTDLHSMGQFIQDGQRTMFETVINLEKSTCEVILEEEDVDLDGLNYLAGKSVDFINKSAMKGTLLAHTDGDVPNLIVNIAEQSEFCLGELFYFFEFACGVSGYILGVNPFDQPGVESYKKNMFALLGKPGFEELSKKLQERLQ
SIO_010081: CPHY_RS02330
subclass of: SO_0000673
so part of: CPHY_RS02330
location: 532429..533778
location: region:532429-533778:1
so has part: feature:532429-533778:1:exon

WP_012198449.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:532429-533778:1:exon

CPHY_RS02335
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02335
old locus tag: Cphy_0420
so part of: sequence
location: 534111..535304
location: region:534111-535304:1
so has part: feature:534111-535304:1:exon
subclass of: SO_0000010

position:534111:1
position: 534111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:535304:1
position: 535304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534111-535304:1:exon

CPHY_RS02335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02335
old locus tag: Cphy_0420
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009263263.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: patatin-like phospholipase family protein
translation: MEGFDFSKEYGIVLEGGGAKGAYQIGVWKAMRELGIKIKGISGVSVGALNGALICMGDFDKAIKLWESITYDRVMEVDNEQMEHLIKRELKQLKLVDLTKTGMRVLASRGFKVAPLKSMIEEVVDENKIRESNIEFYLGTFCISDMKQLEICAAEAEPEKLKDYLLASAYFPAFKNEKLHGLSYVDGGVMNNVPIDTLIKNGYKDIIVVRIYGIGVEKRVKIPEDVRVTTVAPRVDLGSILEFDGKKTQRNITIGYFDAMRVFKFLKGKIYYVDAMLNERDCLELFLECHPSVTMAYHEYYKLDYSNEALYTRDMLETILPLIAEELKLAKDWSYFDLYLALLELCAKYMHVQKYYIYTEQELVNKIKIKYELRKKRHDSKEIPPFVQLALGFITIQ
SIO_010081: CPHY_RS02335
subclass of: SO_0000673
so part of: CPHY_RS02335
location: 534111..535304
location: region:534111-535304:1
so has part: feature:534111-535304:1:exon

WP_012198450.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:534111-535304:1:exon

CPHY_RS02340
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: argF
locus tag: CPHY_RS02340
old locus tag: Cphy_0421
so part of: sequence
location: 535450..536388
location: region:535450-536388:1
so has part: feature:535450-536388:1:exon
subclass of: SO_0000010

position:535450:1
position: 535450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536388:1
position: 536388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:535450-536388:1:exon

CPHY_RS02340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: argF
locus tag: CPHY_RS02340
old locus tag: Cphy_0421
EC number: 2.1.3.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006565741.1
GO function: GO:0004585 - ornithine carbamoyltransferase activity [Evidence IEA]
GO process: GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ornithine carbamoyltransferase
translation: MNLKGRSFLTLKDFTPEEITYLLELAATLKEKKKQGITGNSLKGKNIALIFEKPSTRTRCAFTIGCIDEGGHPEYLGKDDIQLGHKESVEDTARVLGRMFDGIEYRGFSQETVEKLAKYSKVPVWNGLTDEYHPTQILADFLTLKEQFKTLKGLKLVFVGDGRNNMANSLMIGSSKMGIHFTILAPKSLWPKDELVSLCLSYAKDSGSKITITEDLEAVSGADAIYTDVWCSMGEEDKAAERVALLKPYQVNEELIKKSGKESTVFLHCLPAVKGNEVTEEVFEKFADVVFDESENRMHTIKAVMVATLGEE
SIO_010081: CPHY_RS02340
subclass of: SO_0000673
so part of: CPHY_RS02340
location: 535450..536388
location: region:535450-536388:1
so has part: feature:535450-536388:1:exon

WP_012198451.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:535450-536388:1:exon

CPHY_RS20505
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS20505
old locus tag: Cphy_0422
so part of: sequence
location: 536737..537597
location: region:536737-537597:1
so has part: feature:536737-537597:1:exon
subclass of: SO_0000010

position:536737:1
position: 536737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537597:1
position: 537597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:536737-537597:1:exon

CPHY_RS20505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS20505
old locus tag: Cphy_0422
inference: COORDINATES: protein motif:HMM:NF021443.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LiaF-related protein
translation: MKKNHSSYIWGGLLVLFGVLLAARAVDIFTFDIFFDGWWTLFLIIPCFISLFNHGGDKTANLIGLSIGIFMLLSAQGFITWRMFGPLCFAAILVFIGLNMIMPKKHRDQDYSSQNYKTYQGSGSTDQTYDRTYTYEQNFDGTENGQQSGNYGSTQNTGGSNDANSGYQNTYQGARQSGQFACTAVLSGRELRFDNEVFQGAMLSALLGGIELDLRNAIIRENVVIECKTILGGIDIYVPSYVRVVVNCNPILGGVDNKTITPLGANEQTITIYLNATCVLGGIDVK
SIO_010081: CPHY_RS20505
subclass of: SO_0000673
so part of: CPHY_RS20505
location: 536737..537597
location: region:536737-537597:1
so has part: feature:536737-537597:1:exon

WP_012198452.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:536737-537597:1:exon

CPHY_RS02350
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02350
old locus tag: Cphy_0423
so part of: sequence
location: 537817..538140
location: region:537817-538140:1
so has part: feature:537817-538140:1:exon
subclass of: SO_0000010

position:537817:1
position: 537817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538140:1
position: 538140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:537817-538140:1:exon

CPHY_RS02350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02350
old locus tag: Cphy_0423
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013271806.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6145 family protein
translation: MENVILCVSSSYDRKYYLDDKFAGLPEQIKDELKIMCVLYTEDVGGILTLEFEEDGTLTFQVTNDERDFLFDEIGSVLKVKQLQHTKRELLESLETYYKVFFLHEEI
SIO_010081: CPHY_RS02350
subclass of: SO_0000673
so part of: CPHY_RS02350
location: 537817..538140
location: region:537817-538140:1
so has part: feature:537817-538140:1:exon

WP_012198453.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:537817-538140:1:exon

CPHY_RS02355
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02355
old locus tag: Cphy_0424
so part of: sequence
location: 538204..538971
location: region:538204-538971:1
so has part: feature:538204-538971:1:exon
subclass of: SO_0000010

position:538204:1
position: 538204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538971:1
position: 538971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:538204-538971:1:exon

CPHY_RS02355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02355
old locus tag: Cphy_0424
EC number: 2.7.1.33
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198454.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III pantothenate kinase
translation: MLLVIDVGNTNITLGVFDEDKIVGTYRITTTIPRTSDEFGLLFCDLLHVKGIERTSIDSVIIASVVPAIMYSLTSAIIKYLGITPLIVGAGTKTGIKVLTANAKEVGADRIVDLVAAYEEYGGPVFVIDFGTATTYDLVTEDGKFTAGITSPGIRISANALWNDTAKLPEIEILKPDSILAKDTVSSMQAGLVYGNIGATEYIIKKVKEESKLGSLKVVATGGLGKIIADATDMIDIYDPNLTLKGLRYIYQKNR
SIO_010081: CPHY_RS02355
subclass of: SO_0000673
so part of: CPHY_RS02355
location: 538204..538971
location: region:538204-538971:1
so has part: feature:538204-538971:1:exon

WP_012198454.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:538204-538971:1:exon

CPHY_RS02360
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: dusB
locus tag: CPHY_RS02360
old locus tag: Cphy_0425
so part of: sequence
location: 539001..539975
location: region:539001-539975:1
so has part: feature:539001-539975:1:exon
subclass of: SO_0000010

position:539001:1
position: 539001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539975:1
position: 539975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:539001-539975:1:exon

CPHY_RS02360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: dusB
locus tag: CPHY_RS02360
old locus tag: Cphy_0425
EC number: 1.3.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018597093.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
GO process: GO:0008033 - tRNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA dihydrouridine synthase DusB
translation: MSFTIGNVNINGNLVLGPMAGVTDLPFRLLCKEQGADLIYTEMVSAKGIYYNNKNTEVLLEVEEKERPVALQLFGEDPYIMSEMAKRIEHRNFDFLDINMGCPVPKVVNNGEGSALMLKPERIGEIVSAISKAIKKPVTVKIRKGFTKDNINAVEVAKVIEQSGGAAIAVHGRTREQYYSGEADWDIIKAVKEAVSIPVIGNGDVQTPEDVKRMMSYTGCDAVMIARGVRGNPWFFSQAKHYLNTGEILAKPSVPEVIEMILRHGRLAIEVKGEFTAMHEMRKHVAWYTMGYPKSAKLRNQVNEIETYEDLIVLMKKYEEMLDL
SIO_010081: CPHY_RS02360
subclass of: SO_0000673
so part of: CPHY_RS02360
location: 539001..539975
location: region:539001-539975:1
so has part: feature:539001-539975:1:exon

WP_012198455.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:539001-539975:1:exon

CPHY_RS02365
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: asd
locus tag: CPHY_RS02365
old locus tag: Cphy_0426
so part of: sequence
location: 540343..541431
location: region:540343-541431:1
so has part: feature:540343-541431:1:exon
subclass of: SO_0000010

position:540343:1
position: 540343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541431:1
position: 541431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:540343-541431:1:exon

CPHY_RS02365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: asd
locus tag: CPHY_RS02365
old locus tag: Cphy_0426
EC number: 1.2.1.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013272543.1
GO function: GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]
GO process: GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aspartate-semialdehyde dehydrogenase
translation: MSKLRVGILGATGMVGQRFISLLENHPWFEVTTLAASPRSAGKTYEEAVGNRWKMVTPMPEAMKSLIVKNVNEVEAVASEVDFVFSAVDMTKDEIKAIEEAYAKTETPVVSNNSAHRWTPDVPMVIPEVNPEHFEVIASQRKRLGTKRGFIAVKPNCSIQSYTPALNALKEYGPKVVVATTYQAISGAGKNFADWPEMVDNVIPFIGGEEEKSEQEPLRIWGKVLDGEIVKADAPLITTQCIRVPVTDGHTAAVFVSFEKKPEKEEIIRAWNEYKGLPQELNLPSAPKQFIKYFEEDNRPQAALDRDYENGMGICLGRLREDTVYDYKFVGLSHNTVRGAAGGAVLNAELLKALGYIEAKEN
SIO_010081: CPHY_RS02365
subclass of: SO_0000673
so part of: CPHY_RS02365
location: 540343..541431
location: region:540343-541431:1
so has part: feature:540343-541431:1:exon

WP_012198456.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:540343-541431:1:exon

CPHY_RS02370
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02370
old locus tag: Cphy_0427
so part of: sequence
location: complement(541638..542369)
location: region:541638-542369:-1
so has part: feature:541638-542369:-1:exon
subclass of: SO_0000010

position:541638:-1
position: 541638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542369:-1
position: 542369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541638-542369:-1:exon

CPHY_RS02370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02370
old locus tag: Cphy_0427
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MATKETRLDDNAEIYKKREKMTERQKIGEMNTAEKWDYFKQYYFKKLLATLIIIGFVSYLLYEVLSPKPDTVLSVAMVNYPLDEETLTLLENELNELLDVNPETQKILIDTTYDLNNNDYASAEKLSVYSFSGELDLFIAPESQFEKYAFSNSLTPLTDALPTDVYSALSDRLFGCRTRLNDEELPSEAQGPVGVYGIYAEDLPMFKAYKGYMQDPPVIGIIVTSKHSENAVATIRHLYGLDK
SIO_010081: CPHY_RS02370
subclass of: SO_0000673
so part of: CPHY_RS02370
location: complement(541638..542369)
location: region:541638-542369:-1
so has part: feature:541638-542369:-1:exon

WP_012198457.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:541638-542369:-1:exon

CPHY_RS02375
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02375
old locus tag: Cphy_0428
so part of: sequence
location: complement(542541..544196)
location: region:542541-544196:-1
so has part: feature:542541-544196:-1:exon
subclass of: SO_0000010

position:542541:-1
position: 542541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544196:-1
position: 544196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:542541-544196:-1:exon

CPHY_RS02375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02375
old locus tag: Cphy_0428
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSDLDESKVTNETPGNSIERPEFETVNTEETNIVEEPTTNFLGGNTPNKPKKNNRTAGIIALVAGIAACIVIAIFAVPRIIEAVSRSSSSPKERFESAIENYLLDEAKSYEKTLSNKVSTDLKNSTISVDFNVTVNNMLTSMIKQTDPDLFADLKLDNIGGNFVIKNKEDKHNVDATLSANNTKLFNVESYFEKAADTLLFRIPELSSDYLSTPLNLSALESDTSLPQFNIESYKTPDAKEVTSLLTDSAKILTKDINDVSVVKDVKIVASDVSATYDKLTAKISEQDAKNILVKLMKRVYDVESYKNLLDSALLNSDSVNTFDEFISILETAEASNNTVAEFSIFVDKKNELHGCGISMSADGSNMVLSFLTAKGSKNGIELNVAVNDQNLMSLTSNYTKSSNGYQGFVKLFVNELDSTSSIANSDVSLTIDFENVKVVDEKNGHFTGSFYLTSPQLSGTSIELTFGVTGKKQDVTFNVSAASMSLFSLTASYQVTEGAEIVIPAAGANVYDTETEMNDYMSNAFMGLLELVGTVGDAIGVDLTSMMYGM
SIO_010081: CPHY_RS02375
subclass of: SO_0000673
so part of: CPHY_RS02375
location: complement(542541..544196)
location: region:542541-544196:-1
so has part: feature:542541-544196:-1:exon

WP_012198459.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:542541-544196:-1:exon

CPHY_RS02380
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02380
old locus tag: Cphy_0429
so part of: sequence
location: complement(544531..545874)
location: region:544531-545874:-1
so has part: feature:544531-545874:-1:exon
subclass of: SO_0000010

position:544531:-1
position: 544531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545874:-1
position: 545874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544531-545874:-1:exon

CPHY_RS02380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02380
old locus tag: Cphy_0429
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019189772.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015205 - nucleobase transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: uracil-xanthine permease family protein
translation: MTKEQNTIGTVGIYDARALGLPKMILLGLQHAFAMFGATVLVPLLTGLNVSTTLLMAGLGTLLFHILTKGKVPAFLGSSFAFIGGYLAVAPFIETEVNGQIIRTPNTELLPYACGGVVIAGLVYVVLAALIKVFGVNKIMRFFPPVVTGPIIISIGLILAPTAIANCQQNWLLAFVALAVIIICNIYGKGMVKIVPIMLGIIVSYIVALITGAVDFTAVTSANWIGNPVPLSGFAKFSVSSIISIVPISLATMMEHIGDISAISATTGKNYMTNPGLHRTLLGDGLATSMSAIFGGPANTTYGENTGVLALTKVYDPKVMQIAACFAVFLSFFPKFSAIINTLPVAIIGGVSLILYGMISSVGIRNVVENRVDFTQSRNLIIAAIILGCALGFTGINGLTFMVGSYEITLSGLAVAAIAGIVLNAILPGNDYVFSTEEKHDELTFKL
SIO_010081: CPHY_RS02380
subclass of: SO_0000673
so part of: CPHY_RS02380
location: complement(544531..545874)
location: region:544531-545874:-1
so has part: feature:544531-545874:-1:exon

WP_012198460.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:544531-545874:-1:exon

CPHY_RS21560
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS21560
so part of: sequence
location: 546664..546837
location: region:546664-546837:1
so has part: feature:546664-546837:1:exon
subclass of: SO_0000010

position:546664:1
position: 546664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546837:1
position: 546837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:546664-546837:1:exon

CPHY_RS21560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS21560
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSGKILNGTSGRYRTKHLEEKIEQEKIEQEDIEQEDIEQEDIEQEITSNYNWNRNIK
SIO_010081: CPHY_RS21560
subclass of: SO_0000673
so part of: CPHY_RS21560
location: 546664..546837
location: region:546664-546837:1
so has part: feature:546664-546837:1:exon

WP_157668639.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:546664-546837:1:exon

CPHY_RS02385
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02385
old locus tag: Cphy_0430
so part of: sequence
location: 547250..549745
location: region:547250-549745:1
so has part: feature:547250-549745:1:exon
subclass of: SO_0000010

position:547250:1
position: 547250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:549745:1
position: 549745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:547250-549745:1:exon

CPHY_RS02385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02385
old locus tag: Cphy_0430
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014253820.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyl transferase
translation: MKFGFFDDLNKEYVITTPETPYPWINYLGSQAFFSLISNTAGGYSFYKDAKLRRITRFRYNNVPLDLGGGRYYYLYDNGDFWSPGFAPAKKELEYYECRHGMGYTKITGRRNGIETKITFFVPLDYNGEVHKVSIVNTSNQVKNVKLFSFLEWCLWNAQEDSTNFQRNFSTGEVEVKGSVIYHKTEYKERRDHYAFFSVNAPISGFDSDRESFLGTYHGFDNPQVVARGESNNSVADGWSPIASHCVEISLQPKESKELVFILGYAENKLEEKWEYQVGEVDTDGLLLSSVAPNGTNVINKKKAEEMIAKYATVKAVDQALLELKDYWDKLLSKYNVKSHDDKLNRMVNIWNQYQCMVTFNLSRSASYFESGIGRGMGFRDSNQDLLGFVHQIPDRARERIIDLASTQLPDGGAYHQYQPLTKKGNDEIGGNFNDDPLWLILAVTAYIKETGDYDILEVNTPYDNKLELAKPLSDHLKRAFNHVIENLGPHGLPLIGRADWNDCLNLNCFSMDPGESFQTVTSKDGKVAESVMIAGMFTYIGEEYAILMDKVGNNEESIRAMKEVENMRDVIMKHGYDGSWFLRAYDDFGRKIGSDECEEGKIFIESQGFCVMGKCGLNDGKAQKALDSVEKRLGTKFGLVLNNPAFTRYYVEYGEISTYPAGYKENAGIFCHNNAWIMCAEAVIGRGDKAFDYYTKIAPAYTEEYSEIHRLEPYVYAQMVAGKDARRFGEAKNSWLTGTASWNFVAISQYILGIKPEYDGLMIDPAIPTDWEVYQITREFRGDRYDITIVNPYHVSKGVKKLVVDAKEVEGNIIPVFGDGLEHKVKVILG
SIO_010081: CPHY_RS02385
subclass of: SO_0000673
so part of: CPHY_RS02385
location: 547250..549745
location: region:547250-549745:1
so has part: feature:547250-549745:1:exon

WP_012198461.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:547250-549745:1:exon

CPHY_RS02390
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02390
old locus tag: Cphy_0431
so part of: sequence
location: 550144..551712
location: region:550144-551712:1
so has part: feature:550144-551712:1:exon
subclass of: SO_0000010

position:550144:1
position: 550144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:551712:1
position: 551712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:550144-551712:1:exon

CPHY_RS02390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02390
old locus tag: Cphy_0431
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009860994.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MKRRKQLFFLGLLLSCMIALCACSGSTENKGNDQKEAENGEASKNGGSVIVGITNDLDSLDPHKAVAAGTKEVLFNIFEGLVKPDKDGNLVPAVASDYKISEDGMTYTFYLREGVKFHNGALVTVDDVIYSLKRATGLLETSDPEVRVESVFSCVESINAITTEDGKQAVEVKLNQPNIELLSYFTISIIPKDYTEQATKPVGTGPFRFVSYSPLVSIVMEKNPDYYVKGVPYLDEVTFKISANTDAAFMELRAGTIDIFQQLTYEQSNQLKDLYNIEIGHMNLVQALFLNHKAAPFDNLKVRQALSYAIDRQMILDIVAGGNGTIIGSNMFPGFGKYYDESLASYYTYDVEKAKQLLNEAGYPEGFHFTITVPSNYQAHVDTAQVIVEQLKKVGITAEIKLVEWASWISDVYQGRNYESTIIGLDSNLSPSDIVKRYESTSKNNFLNYSNSQFDSLYPKAYASVKEEEKVDLYHQLQRILTEDVASVYLQDPANLVAVNKKLAGYQFYPVYVQDMSTVYYK
SIO_010081: CPHY_RS02390
subclass of: SO_0000673
so part of: CPHY_RS02390
location: 550144..551712
location: region:550144-551712:1
so has part: feature:550144-551712:1:exon

WP_012198462.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:550144-551712:1:exon

CPHY_RS02395
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02395
old locus tag: Cphy_0432
so part of: sequence
location: 551801..552742
location: region:551801-552742:1
so has part: feature:551801-552742:1:exon
subclass of: SO_0000010

position:551801:1
position: 551801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552742:1
position: 552742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:551801-552742:1:exon

CPHY_RS02395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02395
old locus tag: Cphy_0432
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008398781.1
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MKFYIKKLITLIITLVFVSFITFFAFQVIPGDSAIAKLGMDATEEQLQELRESMGLNDPMFVRYGRFLKSTVTGDFGTSTQYNVSVASLVADRLPVTAWLAVLSVLFMVVISLPLGLICARKEDGFIDRFITFLSQTFMAVPPFFLGILISLLFGIILKWFVPGRFVPVSQNFGAFISYMVFPALAVSIPKVAMLTKFLKTSLLRELSYDYVRTARSKGLKKKQIMTKHVLKNALIPVITFFGMLTADALAGSIVVEQVFNLPGMGRMLVSAIANRDFSVVSAAVLYIAGIVIIINFIVDMTYQKVDPRVRIS
SIO_010081: CPHY_RS02395
subclass of: SO_0000673
so part of: CPHY_RS02395
location: 551801..552742
location: region:551801-552742:1
so has part: feature:551801-552742:1:exon

WP_012198463.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:551801-552742:1:exon

CPHY_RS02400
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02400
old locus tag: Cphy_0433
so part of: sequence
location: 552764..553552
location: region:552764-553552:1
so has part: feature:552764-553552:1:exon
subclass of: SO_0000010

position:552764:1
position: 552764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553552:1
position: 553552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:552764-553552:1:exon

CPHY_RS02400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02400
old locus tag: Cphy_0433
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016295522.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MRKQKNRFNFIVGLSLVSFALLLVIVGIFYTPYDPNEMNVLAKNQAPSLFHLFGTDYMGRDVLSRVMDGAFTTFFVGIATVIIGATVGSILGAVTGYFGGVVDEILMRINDAVASFPSILLALVFVSIFGTGKYNVILALGILFIPSFARVVRSEFIIQKEMDYVKSARLLGASHIRIIFLHIFPNTKAILRSAITIGFNNAILAEAGMSYLSLGVRPPDASLGRMLSESQTYLFGAPWMALAPGLMIVITVLGFSLLNEGV
SIO_010081: CPHY_RS02400
subclass of: SO_0000673
so part of: CPHY_RS02400
location: 552764..553552
location: region:552764-553552:1
so has part: feature:552764-553552:1:exon

WP_012198464.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:552764-553552:1:exon

CPHY_RS02405
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02405
old locus tag: Cphy_0434
so part of: sequence
location: 553633..555201
location: region:553633-555201:1
so has part: feature:553633-555201:1:exon
subclass of: SO_0000010

position:553633:1
position: 553633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555201:1
position: 555201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:553633-555201:1:exon

CPHY_RS02405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02405
old locus tag: Cphy_0434
inference: COORDINATES: protein motif:HMM:NF008453.0
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MNSKTDLLLVQDLSISFGEKKKKEVVHNITFSINKGEILGVVGESGSGKSVTAHSVLRLLAEGGKISNGSIWFDGVDLTKLPEEEMVKIRGDEISMVFQEPMTSLNPVLTVGVQIEEMLLLHTKKSSEERKASVYEMMDEVGLQNPESLYSKYPHQLSGGMRQRIMIAMAMICKPRLLIADEPTTALDVTIQAKILELLKELNRKHGTTILFISHDLTVVRNLCDRLLVMYDGRIVESGISGELFQNPKEEYTKKLLAAAEIVHDSSLAMDSKDSSVTNRILEVKDLKVYYTENAKKLFQKKQRKEVVKGISLEVMQGESVGIVGESGCGKSTLAKAITNLVNDMEGRIILREEKPQMVFQDPYGSLNPCKRIGWLLEEPLKLQKVLSKQEREQRVEEILQKVNLPIEYKNRYPRDLSGGQRQRVAIARAMILHPKFVVLDEPVSALDVTVQAQVLTLLKNLKQEFQLSYLFISHDMGVIHSMCDRVCVMYQGEIVESGKTEEVFQNPTHEYTKKLLSSVPK
SIO_010081: CPHY_RS02405
subclass of: SO_0000673
so part of: CPHY_RS02405
location: 553633..555201
location: region:553633-555201:1
so has part: feature:553633-555201:1:exon

WP_012198465.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:553633-555201:1:exon

CPHY_RS02410
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02410
old locus tag: Cphy_0435
so part of: sequence
location: 555330..555656
location: region:555330-555656:1
so has part: feature:555330-555656:1:exon
subclass of: SO_0000010

position:555330:1
position: 555330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555656:1
position: 555656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:555330-555656:1:exon

CPHY_RS02410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02410
old locus tag: Cphy_0435
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNCHDNNNNSNNGKKNEKGHKRHLSHIFMMLICCGAPIILLMLIPLLKRVGIGAGANGILSLLASLACPLMMMVMIPMMMKGLKNKEDNHNSISSASTEQMEIGQMKE
SIO_010081: CPHY_RS02410
subclass of: SO_0000673
so part of: CPHY_RS02410
location: 555330..555656
location: region:555330-555656:1
so has part: feature:555330-555656:1:exon

WP_041703104.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:555330-555656:1:exon

CPHY_RS02415
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02415
old locus tag: Cphy_0436
so part of: sequence
location: 555968..557662
location: region:555968-557662:1
so has part: feature:555968-557662:1:exon
subclass of: SO_0000010

position:555968:1
position: 555968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557662:1
position: 557662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:555968-557662:1:exon

CPHY_RS02415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02415
old locus tag: Cphy_0436
inference: COORDINATES: protein motif:HMM:NF012245.2
GO process: GO:0006935 - chemotaxis [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAMP domain-containing methyl-accepting chemotaxis protein
translation: MFNTIRKKLIAGFSLILIIIIASTVYNMYIYNNSRTHIISIRENAVTSYKYASEMKNNVIQVGQFLTDVSASKDTAQLKEAEEQYNSYKSNSEELASLNPEYTDQLNALNIEVDKFYTIGKEMADTYVKSGHEVGNIMMVDFDKAADKIYAEVDEIQKKSEAAMDDSLMTIQMHMDMNQNISTVLAIITIIIALLTAILLAGSITKPINNLLEIFKDLERGQGDLTSRINIKSKDELSRLARSFNTFMDSLESMMINIKKNSVRVSQGSELLSEGGMQTSSGVVTINTHMEKMVKDTQIINTSINQITDSIYEMTQASQDSANDAQRISVEVDRVNMLAQESGKLALDTKLEMENTEKISSYTIDIAEKLGNEAEEIGKIIGTIKSITDQTNMLALNAAIEAARAGEHGRGFSVVAEEIRNLAESNSQSAKTIEDIVKNIQDMIQKTMAATMDVGGDIKRSSTMVENVYTQLNHIIDGVKNINNRIQNIAAITEEQSASTEELSATMESINDSNTAITSAMQEVAASISTQTDTITGLSTTASDLNESAKQLNELVSKFKFRES
SIO_010081: CPHY_RS02415
subclass of: SO_0000673
so part of: CPHY_RS02415
location: 555968..557662
location: region:555968-557662:1
so has part: feature:555968-557662:1:exon

WP_012198467.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:555968-557662:1:exon

CPHY_RS02420
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02420
old locus tag: Cphy_0437
so part of: sequence
location: 557920..558348
location: region:557920-558348:1
so has part: feature:557920-558348:1:exon
subclass of: SO_0000010

position:557920:1
position: 557920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558348:1
position: 558348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:557920-558348:1:exon

CPHY_RS02420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02420
old locus tag: Cphy_0437
inference: COORDINATES: protein motif:HMM:NF013629.2
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional repressor
translation: MNTGKKYNTKQKESILECIKKNSEEYITIQKIYDDLIKKGQKVGLTTIYRNLDKLEADKEIVAINIEGYNGTCYKYLSDKKDNILFYIKCEECGNLIHIKCPELSSLYVHLQEEHHIQINPVKTMFYGRCESCLIGYCGDKS
SIO_010081: CPHY_RS02420
subclass of: SO_0000673
so part of: CPHY_RS02420
location: 557920..558348
location: region:557920-558348:1
so has part: feature:557920-558348:1:exon

WP_157668640.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:557920-558348:1:exon

CPHY_RS02425
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02425
so part of: sequence
location: 558470..558775
location: region:558470-558775:1
so has part: feature:558470-558775:1:exon
subclass of: SO_0000010

position:558470:1
position: 558470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558775:1
position: 558775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558470-558775:1:exon

CPHY_RS02425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02425
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKYNQKCIKYVTILLAFCILFVMLHLTIFSANRTYHYCPGVDCSVCQELQVVDNIVKQFSAAITTAALGISLVVFYKVSNTTSSCLILGRTLIMDKVRMDN
SIO_010081: CPHY_RS02425
subclass of: SO_0000673
so part of: CPHY_RS02425
location: 558470..558775
location: region:558470-558775:1
so has part: feature:558470-558775:1:exon

WP_041703107.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:558470-558775:1:exon

CPHY_RS02430
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02430
old locus tag: Cphy_0438
so part of: sequence
location: 558894..559904
location: region:558894-559904:1
so has part: feature:558894-559904:1:exon
subclass of: SO_0000010

position:558894:1
position: 558894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:559904:1
position: 559904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558894-559904:1:exon

CPHY_RS02430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02430
old locus tag: Cphy_0438
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013270887.1
GO component: GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metal ABC transporter substrate-binding protein
translation: MKKWNKAWYLLFFFILSVVSLTACNMKNKKEASGTLSIVCTSFPQYDFVKQIIGENPAGIEVTYLLKNGIDLHNYQASAEDMVKIRSSNLFLYIGGESEKWANEVVKQVESTDFHALALINVVQAKEEEIVEGMETEHLEGEDHEGEVQEGVEHKEEYEYDEHVWLSLKNAEVIVNEICEELSNIDSSNSEYYKNNAASYIQELKELDEQFYNFTKKTARDTILVADRFPFRYFVDDYNLRYYAAFVGCSAETEASFETIAFLAKKVEELGLPVVLIIDGSDGSIAKTVIENSKQENASVRTLNSMQSVSMENIASGASYLSIMKENLQILKEALD
SIO_010081: CPHY_RS02430
subclass of: SO_0000673
so part of: CPHY_RS02430
location: 558894..559904
location: region:558894-559904:1
so has part: feature:558894-559904:1:exon

WP_012198469.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:558894-559904:1:exon

CPHY_RS02435
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02435
old locus tag: Cphy_0439
so part of: sequence
location: 559906..560619
location: region:559906-560619:1
so has part: feature:559906-560619:1:exon
subclass of: SO_0000010

position:559906:1
position: 559906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:560619:1
position: 560619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:559906-560619:1:exon

CPHY_RS02435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02435
old locus tag: Cphy_0439
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015541838.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metal ABC transporter ATP-binding protein
translation: MALISCSDTVLAYDEKVVVSNLNFHVREGEYLCIVGENGSGKSTLIKTILGLKTVSSGTITYGDGIRANEIGYLPQQTEIQKDFPALVKEVVLSGGLNGCGLRPFYNKYEKSKARRNMELLNIENLENKCYRELSGGQKQRVLLARALCASKKLLLLDEPVTGLDPNATKDMYDLIEKLNKENHVTVLMVSHDISAAVKYATHILHIGNTPLFYGSKGEYLESEIGRIYTGKAGTLL
SIO_010081: CPHY_RS02435
subclass of: SO_0000673
so part of: CPHY_RS02435
location: 559906..560619
location: region:559906-560619:1
so has part: feature:559906-560619:1:exon

WP_012198470.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:559906-560619:1:exon

CPHY_RS02440
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02440
old locus tag: Cphy_0440
so part of: sequence
location: 560616..561461
location: region:560616-561461:1
so has part: feature:560616-561461:1:exon
subclass of: SO_0000010

position:560616:1
position: 560616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561461:1
position: 561461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:560616-561461:1:exon

CPHY_RS02440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02440
old locus tag: Cphy_0440
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016148489.1
GO component: GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
GO process: GO:0030001 - metal ion transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metal ABC transporter permease
translation: MMEKLVYYFEFPFVRYALLVGVLISLCTSLLGVPLVLKRYSMIGDGLSHVAFGATAIAAIFHITTNVYITLPITVICAVLLIRNGENKRIKGDASIAMLSVGALAIGYLFLNIFSTSTNLSGDVCSTLFGSTSILTLSKTDVVLSMVLSVVVLLVFTIFYNKIFVITFDESFSKATGVKTGVYNLMLAIITAIVIVLAMNLVGALLISALIIFPATSSMKVFKSFRTVILSSAIIAVLCATLGILTSILLGTPVGSTIVAANIIVFVCIEIMTRSFKIIKG
SIO_010081: CPHY_RS02440
subclass of: SO_0000673
so part of: CPHY_RS02440
location: 560616..561461
location: region:560616-561461:1
so has part: feature:560616-561461:1:exon

WP_012198471.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:560616-561461:1:exon

CPHY_RS02445
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02445
old locus tag: Cphy_0441
so part of: sequence
location: 561500..562153
location: region:561500-562153:1
so has part: feature:561500-562153:1:exon
subclass of: SO_0000010

position:561500:1
position: 561500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562153:1
position: 562153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:561500-562153:1:exon

CPHY_RS02445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02445
old locus tag: Cphy_0441
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRSLIITLVALMCLTFSGCGNGNSKVFDVLDENTRDKGPQNNSDSKEKEESQQAEEGAQVPEGNYGSMIDLAEEYLNNESFPEENSDVTSDLEFDTDKKDLSVDVDLTQMSSIMIYSEVYNMMTNPEAYIGKTIKIRGPYYTSYWEDTGKYYHFVIISDATACCSSGLEFIWEENSHKYPDEYPEDETEIELVGRFDSYEELGQTYYFLATDSLDY
SIO_010081: CPHY_RS02445
subclass of: SO_0000673
so part of: CPHY_RS02445
location: 561500..562153
location: region:561500-562153:1
so has part: feature:561500-562153:1:exon

WP_012198472.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:561500-562153:1:exon

CPHY_RS02450
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02450
old locus tag: Cphy_0442
so part of: sequence
location: 562582..564438
location: region:562582-564438:1
so has part: feature:562582-564438:1:exon
subclass of: SO_0000010

position:562582:1
position: 562582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:564438:1
position: 564438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:562582-564438:1:exon

CPHY_RS02450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02450
old locus tag: Cphy_0442
inference: COORDINATES: protein motif:HMM:NF012869.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MIGKYIKRYKWSYLLGIITLFAVDLLGLLIPEYTGKITDGLKDKTMDFQGVLYMIGLILAVGGLMALGRFLWRIFIFGGARKIEYALRNDMFEHLTTLSTRYFNENKTGDFMAHFTSDLSAIRMALGPAVVTTFDAIIMTIMVVVKMVFYVDLRLTLLACIPMTFIMIGGIYFGSKVEKRFTKKQEAFSNMTDEVQESISGVRVVKAFVQEEKEIVSFSKTNLKNKKANLQVVKLQATVLPLLDLLIGLSSVITLLFGGKLVLDGVITAGKFVAFISYIGMLVWPMIAAGESINLLSQGFASIKRVRTIFMEQPEIVDGPECDNKVTKLLGEIALNHLTFSYKEGNTPVLQDISVKIPKGNTLAILGRTGSGKTTIANLLLRLYDVEDGMITFDRNSIRKIPLHVLREQIAYVPQDNFLFSDTIQTNIAFGVRKLRDIEEEEEKMKLFPSKKERMEAHLESDFMKTESKADGIYQDLDMVQEAAKTACIHDNIMDFPKQYSTMVGERGVTVSGGQKQRSSIARALMKDAPILILDDALSAVDTNTEEQILRNLKENRKDKTTIIIAHRISTIQNADNILVLEEGRVAEYGNHENLLAEQGIYAKLYEKQQLEKQLERE
SIO_010081: CPHY_RS02450
subclass of: SO_0000673
so part of: CPHY_RS02450
location: 562582..564438
location: region:562582-564438:1
so has part: feature:562582-564438:1:exon

WP_012198473.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:562582-564438:1:exon

CPHY_RS02455
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02455
old locus tag: Cphy_0443
so part of: sequence
location: 564450..566216
location: region:564450-566216:1
so has part: feature:564450-566216:1:exon
subclass of: SO_0000010

position:564450:1
position: 564450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:566216:1
position: 566216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:564450-566216:1:exon

CPHY_RS02455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02455
old locus tag: Cphy_0443
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015568350.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MSRKEIEYEKSIHGSVFLRLMKYATPYFPMMILAFILVLALTGLELLRPALIGRVVDLFKVDGTLDEIKFIAVIYGAALVLSFVFNILQTWILQLTGQNIIYNIRQELFEHIHKLSLRFFDITPVGKIVTRVTNDVEALHEMYANILVKLLKNIVKIIGLAIVMLFMNVRIALFGFSLLPLIIGLTWIFKRTSRLTYRITRTKITAINTYLSEHLSGMKLIQIFAREKEKNAEFGQKSKGLYRANYREMMVFAIFRPLMYILSIIALVIIVAVGGDSVLKGTVTVGTLITFIQYISLFFEPIQELAEQFGTLQSAMASAEKIFTILDEPIIVKNPENPTLVEEIKGRIEFEHVWFAYEGENWILKDVSFVIEPGQSVAFVGATGAGKSSILNLIGRYYDIQQGRILVDGIDIKELKTEDLRKAIGQVQQDVFIFTGDVMSNIRLKSDTITEEEAIKAAKYVNADHFIENLNNTYYEAVTERGATFSAGQRQLLSFARTLAYNPSILVMDEATANIDTETEQLIQEALEKLMQGRTTIMVAHRLSTIQHANKIIVMHKGELREMGTHQELLENNGIYKKLYELQLAGEH
SIO_010081: CPHY_RS02455
subclass of: SO_0000673
so part of: CPHY_RS02455
location: 564450..566216
location: region:564450-566216:1
so has part: feature:564450-566216:1:exon

WP_012198474.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:564450-566216:1:exon

CPHY_RS02460
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02460
old locus tag: Cphy_0444
so part of: sequence
location: 566471..567052
location: region:566471-567052:1
so has part: feature:566471-567052:1:exon
subclass of: SO_0000010

position:566471:1
position: 566471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:567052:1
position: 567052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:566471-567052:1:exon

CPHY_RS02460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02460
old locus tag: Cphy_0444
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MLQHRILNEEEISKVYEEHLIKDFPPEELKPLSLLLSLKKQGIYCCYGLYDNEEFVAYAFFAKPETIDYLLLDYLAVCKNHRSKQYGSKFLKLLQKELKEYQGILFEVESGADAKNEKEKQICERRIAFYLRNGLTKTKINVKLFGVDMILLYLEIQGTPSEKILSESLNHIYDLVFGEETHRREIFCKIVEE
SIO_010081: CPHY_RS02460
subclass of: SO_0000673
so part of: CPHY_RS02460
location: 566471..567052
location: region:566471-567052:1
so has part: feature:566471-567052:1:exon

WP_012198475.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:566471-567052:1:exon

CPHY_RS22280
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS22280
old locus tag: Cphy_0445
so part of: sequence
location: 567284..568786
location: region:567284-568786:1
so has part: feature:567284-568786:1:exon
subclass of: SO_0000010

position:567284:1
position: 567284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:568786:1
position: 568786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:567284-568786:1:exon

CPHY_RS22280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS22280
old locus tag: Cphy_0445
inference: COORDINATES: protein motif:HMM:NF012415.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CAP domain-containing protein
translation: MSKKLLLISVLALFLTACGNTKETSKEISDALQSKDAEIINNLDETNQQVTNSPENQNINESDNDKLTQNLPGENQDVPSIQNQQDGSEGNLSDKVTTYDNSQTDNSTNSRTDNPQNKDSSTGNTGDQSPSIGNDSSNKDDNEASTVPTGVPKTPEVTSTPTKAPDIVPIHTPVPTRTPIITPTRIPTPTKTPQPTKVPTVTVAPTKVPVATPSPTKVPAPTKTPTVTPPSNVSGADSISVRGKTISIGDSKSDVVSAFGSPNRTDDTEYNYDFMVYNDNYKKFMMIAIADSKVVGWYTDSTDFSYQGLSTSSKVSSINSVFGKSSSLSDTISISDSGNKITFFMDSIGDGTIDGISVFDNSVSKGSTSKTVLKAWEKEILDLTNSFRARNGLSALSWSDAAGTSARLHSEDMAKNNYFNHTGLDGSSPGDRMKAQGISYRSNGENIIGGYGNALFSSNGWMNSSGHRSNMLNKGFTYLGVGYALGGSYGNYATQNFYSN
SIO_010081: CPHY_RS22280
subclass of: SO_0000673
so part of: CPHY_RS22280
location: 567284..568786
location: region:567284-568786:1
so has part: feature:567284-568786:1:exon

WP_012198476.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:567284-568786:1:exon

CPHY_RS02470
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02470
old locus tag: Cphy_0446
so part of: sequence
location: 569177..570013
location: region:569177-570013:1
so has part: feature:569177-570013:1:exon
subclass of: SO_0000010

position:569177:1
position: 569177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:570013:1
position: 570013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:569177-570013:1:exon

CPHY_RS02470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02470
old locus tag: Cphy_0446
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004612539.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MBL fold metallo-hydrolase
translation: MKITALIENISKGGLLNEHGLCVHIAYEGKNYLLDTGASDLFIKNAEALNINLEEVDAGILSHAHRDHSGGYEAFFKYNQKAKVYLRKESREQYYIKKLCIKKYIGIPDDILIKYPKRFTYVTGDYRIDKGVSLIAHKTNDMEKRGKAMNMFRKVDGHFQLDDFSHEQSLVFEAEKGLVILNSCSHGGIENIIKEVKESYPNREILAVIGGFHLMGLLGTSTMRLSEGEVRKLGKDLLDSGVKNIYTCHCTGNKAFALLKEELGDRLHYFQTGDCLEF
SIO_010081: CPHY_RS02470
subclass of: SO_0000673
so part of: CPHY_RS02470
location: 569177..570013
location: region:569177-570013:1
so has part: feature:569177-570013:1:exon

WP_012198477.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:569177-570013:1:exon

CPHY_RS02475
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: infC
locus tag: CPHY_RS02475
old locus tag: Cphy_0447
so part of: sequence
location: 570388..570882
location: region:570388-570882:1
so has part: feature:570388-570882:1:exon
subclass of: SO_0000010

position:570388:1
position: 570388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:570882:1
position: 570882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:570388-570882:1:exon

CPHY_RS02475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: infC
locus tag: CPHY_RS02475
old locus tag: Cphy_0447
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008722378.1
GO function: GO:0003743 - translation initiation factor activity [Evidence IEA]
GO process: GO:0006413 - translational initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation initiation factor IF-3
translation: MINEQIRDREVRLVGEDGEQLGVMSAKDALKMAQDANLDLVKIAPTAKPPVCKIVDYGKYRYELARKEKEAKKKQKVTDVKEIRLTPNIDDNDLNTKANQARKFITKGDKVKVSLRFRGREMAHINSSKQILDSFFEKLQDVAVVEKPAKMEGRSIFMFLTEKR
SIO_010081: CPHY_RS02475
subclass of: SO_0000673
so part of: CPHY_RS02475
location: 570388..570882
location: region:570388-570882:1
so has part: feature:570388-570882:1:exon

WP_012198478.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:570388-570882:1:exon

CPHY_RS02480
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: rpmI
locus tag: CPHY_RS02480
old locus tag: Cphy_0448
so part of: sequence
location: 570973..571170
location: region:570973-571170:1
so has part: feature:570973-571170:1:exon
subclass of: SO_0000010

position:570973:1
position: 570973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571170:1
position: 571170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:570973-571170:1:exon

CPHY_RS02480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: rpmI
locus tag: CPHY_RS02480
old locus tag: Cphy_0448
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012742791.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L35
translation: MPKLKTSKAAAKRFKVTGTGKLKRMKAGKQHILTKKSQKTKRNLRKATMMDPSNEKNMKKILPYL
SIO_010081: CPHY_RS02480
subclass of: SO_0000673
so part of: CPHY_RS02480
location: 570973..571170
location: region:570973-571170:1
so has part: feature:570973-571170:1:exon

WP_012198479.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:570973-571170:1:exon

CPHY_RS02485
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: rplT
locus tag: CPHY_RS02485
old locus tag: Cphy_0449
so part of: sequence
location: 571198..571554
location: region:571198-571554:1
so has part: feature:571198-571554:1:exon
subclass of: SO_0000010

position:571198:1
position: 571198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571554:1
position: 571554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:571198-571554:1:exon

CPHY_RS02485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: rplT
locus tag: CPHY_RS02485
old locus tag: Cphy_0449
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198480.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L20
translation: MARIKGGLNAKKKHNKVLKLAKGYRGARSKQYRVAKQSVMRALTSAFAGRKERKRQFRQLWIARINAAARMNGLSYSKFMYGLKLAEVSVNRKMLAELAVNDAEGFKALVEVAKSKLA
SIO_010081: CPHY_RS02485
subclass of: SO_0000673
so part of: CPHY_RS02485
location: 571198..571554
location: region:571198-571554:1
so has part: feature:571198-571554:1:exon

WP_012198480.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:571198-571554:1:exon

CPHY_RS02490
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02490
old locus tag: Cphy_0450
so part of: sequence
location: 571881..574442
location: region:571881-574442:1
so has part: feature:571881-574442:1:exon
subclass of: SO_0000010

position:571881:1
position: 571881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:574442:1
position: 574442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:571881-574442:1:exon

CPHY_RS02490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02490
old locus tag: Cphy_0450
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYCQHCGKFTENVDGVCESCRDTLEVTKELVEESRDLTENTQDSKAILGENQNGEKTLEGKITSNRESFLETKEFILEEKTDENGLEQKGEKDDTGGLKKELPPRLKKIQKIGTDKWNDFIENTGKEMITVSTIKESTFFLVLTLCVSMLLSVVIMLIANTIFKNQINSIWGQMVGSYMGKSQGGFLTAYRLFRMSYLHSLKLTASAIGVRTVMHMNVHLLILALIPFVSILISWKLLSHQKIRASLKFIFSDDTVFNKRKVLPITLNVSFTLAILFFITSFIPSNLIKNELLSLKLSYGAFSSIVGTILITLLFCYLITGILKLREGKKSTSSILWCLRQYYMKYSIGVIVVSILLMLIALIRSNMWKQIGAFLLALPNIILILANALSFGGLQTINSGDVYNLRSSLSGFQVACSVILALTWCIFLWYVLYQIYLKLEKSNAKDYIKNVGIISGITLVIQSVFYYLSKVEISLRALGEAEVGTAIKTNIFLSLFVLALISAGAAACAYYFPNLLYKKGSKEEVLLLGSWKRLDMAVLIALSIFVSITFLSMTKVLNRSVESSSIIGGNNSSVKESYSMVHLDEIRVFNGGIVFRDYDKMYTYQKEKVKKINFDEYLTSYYSNTEYYYSKTSDRILKVNQNDAMLVDSKGKELYKQKVNFDRLLSATKEFDKLLFLVDDEITLYSKKESNFSILDGITYYEYSDFYFDDSEEYIYLVGNSISRYDLKSKKLEVVKEQTPEYILDSEEKLTAKLYIFKEGKLVPPVGDSNKKYYVKDMIREYQTYSVIIENGKDSPVSLPDMVSAEAIDTEGTKFLVTFTEYGDYYLYDAAKAELTNISTQIRYLTSNGKVEA
SIO_010081: CPHY_RS02490
subclass of: SO_0000673
so part of: CPHY_RS02490
location: 571881..574442
location: region:571881-574442:1
so has part: feature:571881-574442:1:exon

WP_012198481.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:571881-574442:1:exon

CPHY_RS20515
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS20515
old locus tag: Cphy_0451
so part of: sequence
location: 574524..576572
location: region:574524-576572:1
so has part: feature:574524-576572:1:exon
subclass of: SO_0000010

position:574524:1
position: 574524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576572:1
position: 576572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:574524-576572:1:exon

CPHY_RS20515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS20515
old locus tag: Cphy_0451
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKIQLFLVSLFCMLVLSACGAEITTTTNLNKDGSGELIVTAVASSSDEKYLNGGYEALNQLLLEKAPEGLELSVVYDETNSNYTYSYKIGFQDANDYNNKIAALFGTQGLAEFSDTTDNLTHTTKYQDLTDKALFIDWALNAIDESGICSYASSEIYSWGYRYLNYNGEEVNYGYKDPSMKKTTTVGVLKVKCFSEYDIYSDATKTIEIYLNTSDLVGIEEEDILSYFRKFDQDVEYNATAGTIIYRFDSLEKINQFLLSVMNSDGETNITESPVKLSITDSSIFSFTFELEEYYNLGNLFKTLRMDTDYIDVYLSIPEDLAYGWYHFTSYKDASEVADAKYNFQGACYYDSSFNSSFKVNQSVTVKNIDVKCILENDMSGKLTTEFSFLPNGCNIDEAKCKEFYKDLGQELTYREQGDTVVVAFTKNFHKGESYIDKSNVIQLKESSLSNRKTKIYTLDHVFMLSGLVPMKDCEVNYKIMVPDSLKVTFLHSNDDILTGKKIEKIQKNGYYTESLSTYRGTVSVSVAIEKTNVLYYVIVIAIVVAAVAGVAITTVIIIKNKKGLKREAATTSDTAPTNEVAPTDEATPTNEVAPTDEATPTNEVAPTDEATPTNEVAPTDEATPTNEVSPTHEATTMNETATSNEAAPTKEAAVTSDTATTYETVIPNETVAAKDTANNP
SIO_010081: CPHY_RS20515
subclass of: SO_0000673
so part of: CPHY_RS20515
location: 574524..576572
location: region:574524-576572:1
so has part: feature:574524-576572:1:exon

WP_012198482.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:574524-576572:1:exon

CPHY_RS02500
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02500
old locus tag: Cphy_0452
so part of: sequence
location: 576883..577551
location: region:576883-577551:1
so has part: feature:576883-577551:1:exon
subclass of: SO_0000010

position:576883:1
position: 576883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577551:1
position: 577551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:576883-577551:1:exon

CPHY_RS02500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02500
old locus tag: Cphy_0452
inference: COORDINATES: protein motif:HMM:NF021443.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LiaF-related protein
translation: MRYRISNVLWGLFWMSLGVIIAGNVFQWWDISLFFPGWWTLFLIVPCSISIIRNGFGGFSLIGLVVGIMLLLNSQGIFLADTVRKLIVPVVLIIIGLNILMRSAFNGSSKVKIPIPKECSYAATFSGNTVQFPNQRFEGAELNSIFGGVRLDLRSAIIEENVCIDATSIFGGIDIFVPENVRVKVSSSSFFGGVSNHRRRISGEVPTIYINATCMFGGVDIR
SIO_010081: CPHY_RS02500
subclass of: SO_0000673
so part of: CPHY_RS02500
location: 576883..577551
location: region:576883-577551:1
so has part: feature:576883-577551:1:exon

WP_012198483.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:576883-577551:1:exon

CPHY_RS02505
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02505
old locus tag: Cphy_0453
so part of: sequence
location: 577548..578456
location: region:577548-578456:1
so has part: feature:577548-578456:1:exon
subclass of: SO_0000010

position:577548:1
position: 577548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578456:1
position: 578456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577548-578456:1:exon

CPHY_RS02505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02505
old locus tag: Cphy_0453
inference: COORDINATES: protein motif:HMM:NF024743.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4097 family beta strand repeat-containing protein
translation: MSPFQKIIKYFAMGFAAFLMVGILTSIVAVVSGLGSGIDTYEINKNYVSFTKDFDNVKNLNFSNGDKKLTLVSGDTDKVIVEAKNVPDSLEVKVTSDGTLTIKDRDRFHISWIIGWSGNWNSDMEIIVTVPRDFTVGKVELDSGSANMEVNDLTADNMIIDGGSGSFIGRNLSAKKANISLGSGSTRLDYVKFEKGKMDCGSGDVKIENAIFRDVDFDGGSGSISYSGQLSGKTSLNCGSGRISFELEGKREDYNINSDSGSGGIWIDGTRADNYKERNSDVNNEIKIDGGSGRVLINFYSE
SIO_010081: CPHY_RS02505
subclass of: SO_0000673
so part of: CPHY_RS02505
location: 577548..578456
location: region:577548-578456:1
so has part: feature:577548-578456:1:exon

WP_012198484.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:577548-578456:1:exon

CPHY_RS02510
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02510
old locus tag: Cphy_0454
so part of: sequence
location: 578474..578797
location: region:578474-578797:1
so has part: feature:578474-578797:1:exon
subclass of: SO_0000010

position:578474:1
position: 578474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578797:1
position: 578797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:578474-578797:1:exon

CPHY_RS02510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02510
old locus tag: Cphy_0454
inference: COORDINATES: protein motif:HMM:NF017760.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MLIPKDKYEKASGMDSFSRNLVTVSSPMLAAVILSTFGMGGIILIDLISFLFAVIVLIFFIPIKEERAVSVKKKEPFFAGFQEGIDFLKKHKILFYNRTMERKEPNC
SIO_010081: CPHY_RS02510
subclass of: SO_0000673
so part of: CPHY_RS02510
location: 578474..578797
location: region:578474-578797:1
so has part: feature:578474-578797:1:exon

WP_012198485.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:578474-578797:1:exon

CPHY_RS02515
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02515
old locus tag: Cphy_0455
so part of: sequence
location: 579149..580342
location: region:579149-580342:1
so has part: feature:579149-580342:1:exon
subclass of: SO_0000010

position:579149:1
position: 579149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:580342:1
position: 580342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:579149-580342:1:exon

CPHY_RS02515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02515
old locus tag: Cphy_0455
EC number: 4.4.1.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004618508.1
GO function: GO:0004121 - cystathionine beta-lyase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO process: GO:0009086 - methionine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MalY/PatB family protein
translation: MSKYNFDKWIERAGTNCVKYDFAKESGYSGEELSLWVADMDFETVPEITEALVERAKHGIYGYTMPKEDYWNTVISYMEKEHNYKTKIEWYVNAPGIVFAIALAIRALTKEGDSVIIQRPVYHPFTRMVEANNRKLINSPLKEVMLNGSIHYEMDLIDFEEKIKRHNVKLFILCNPHNPVGRVWTKDELIAIGEICRRNGVVVVSDEIHFDFVYPGFTHTCFASISKEFEDMTITCTSPTKTFNLAGLQISNVIIENQEIREKVSEEIKKSGYDEPNIFGMVACKAAYEFGKPWLEELNEYLLGNLKFVREFVKEHLPKISLIEPEGTYLTWLDFRAYQLTKDELEQKIVKEAKLRLNAGSMFGEEGEGFARVNIATPRAYLEKAMKQLEQAFVDLR
SIO_010081: CPHY_RS02515
subclass of: SO_0000673
so part of: CPHY_RS02515
location: 579149..580342
location: region:579149-580342:1
so has part: feature:579149-580342:1:exon

WP_012198486.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:579149-580342:1:exon

CPHY_RS02520
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02520
old locus tag: Cphy_0456
so part of: sequence
location: 580553..581356
location: region:580553-581356:1
so has part: feature:580553-581356:1:exon
subclass of: SO_0000010

position:580553:1
position: 580553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:581356:1
position: 581356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:580553-581356:1:exon

CPHY_RS02520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02520
old locus tag: Cphy_0456
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKEREKSFLWNHKLKCIIALFTFMVVFAITGCSDKKNKQTSVDDTLITPEANNNITTTPLPTPVAMTPAPGITLTPTPEVTVTPTPTKTPLGDISEEEAQKLVLAKLDTSKYSIDLSDDHLSIDGETYYVYVVSDSNGILEPAIIVNKKSRNLYSYDVNGNVTPFTKFPLDNVESVNQNEDTITQAEALEQLKKVKKEKLGLVNTLSHYNVVADTWTTVVAGEDCYCFNVFEGRAENQLVGMYYVSVSGENIYRFEEESSDFIKIN
SIO_010081: CPHY_RS02520
subclass of: SO_0000673
so part of: CPHY_RS02520
location: 580553..581356
location: region:580553-581356:1
so has part: feature:580553-581356:1:exon

WP_012198487.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:580553-581356:1:exon

CPHY_RS02525
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02525
old locus tag: Cphy_0457
so part of: sequence
location: 581798..585355
location: region:581798-585355:1
so has part: feature:581798-585355:1:exon
subclass of: SO_0000010

position:581798:1
position: 581798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:585355:1
position: 585355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:581798-585355:1:exon

CPHY_RS02525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02525
old locus tag: Cphy_0457
inference: COORDINATES: protein motif:HMM:NF040159.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF5717 family protein
translation: MKEKIEQLAKGVFIYNLPEVILSEESLELYVECGSIYRGSFTIQNNQNTRMKGVLYSSNQNLHIENDRFIGEVSTIEYYFTAEYLETLTSYEETIHIISDCGEFVLPVIIHITSPSCESSVGKIKNLFEFAGLAQTNWEEAKEVFQSEKFGQVIAYYDNQYLLLYQALKKSSSASQALEEFLIATHKKVPASYQVDKTELQYEAGSYNFMDKLLIKKEGWGHSEVIIKSDAKFLQPQMNTLRMESFADGEAELNFVVQTEGMKEGLHYGNITIDVALQRFVIKVSVHCRRQNVVRRITLQKEKSCYVKLTKNYLDFRLDRISLSKYVSDAESILLTLLSGEKESIFYELFHLHLKLISGKEGMVTSTFEALEQKEEELKKTEPVAYGIYLYLKTLRKKSNQDALSVFQEVMELSEQYPKELFLFWCQLYLNKSYTSNPAQKLKDLKDRFQQGIHSPILYYEAALLLREDTLLLRELDSFELQVISFALRNHFLKKETATTVAYLASKCKVPHRHLLRILDEIYEQYGLKDALYAIISILIRGHKRETRYHRYYRLGMEKQLRITELPEYYIYSMGEEYQEIHPAVISYFTYENKLPDRKRAFYYACLLTKHRENMTIMEHHRVEMLQFLKRQLFAGVFHRHLTVIADALLPDTSVDTELAELIPKISFVHEVVCENPKIKSVAIVHKELQEECIVPLTEGQAFINLYTEQAQIFFIDHKEQRYYTLASYTLKKLTHLTPLLENCYAINPDQAELIIYLSEKDQFYQKFDEYTIELRKRIVQQSTLTKEYRREFVQTLIHYYYDNFEGEILESYLKNIDLKVFEQQSRYKMIEFMILREMYPLALRAMEELGYEGVEIKRLQRLCNHLLASPDEVSRYQEILLQIAFYLFTKGYYEEVTLSYLVKYFYGTTAQMYDLWKMAKEKSIDTLDLEERLLGQMLFAESYLGNAIQVFLSFYNKGCNRKLTRAFISFYSYKYLLRDRVTEPELFEVIRKELNYEENDVALRALLKHYSTKEQLTDDEVKFIDYHLSRLVQKGVVLPFFKEFKRNMRIPQHMYDKCYVEYHTNPKNRVVIHYSYGYESGEKDFAVEEMQNQCYGIFVKEFILFYNEELQYYITEITEQGEEVTESKTIIGTMEEEASGEDCYIQLNHIMEAKELKDDATVLRLLDNYVKQKFTIDTLFKAID
SIO_010081: CPHY_RS02525
subclass of: SO_0000673
so part of: CPHY_RS02525
location: 581798..585355
location: region:581798-585355:1
so has part: feature:581798-585355:1:exon

WP_012198488.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:581798-585355:1:exon

CPHY_RS02530
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02530
old locus tag: Cphy_0458
so part of: sequence
location: 585371..586633
location: region:585371-586633:1
so has part: feature:585371-586633:1:exon
subclass of: SO_0000010

position:585371:1
position: 585371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:586633:1
position: 586633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:585371-586633:1:exon

CPHY_RS02530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02530
old locus tag: Cphy_0458
inference: COORDINATES: protein motif:HMM:NF039205.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF5716 family protein
translation: MGENKQLLIGFEITNETSQIYYYQAQTGDAVPIFLTQNQSNPLFPTCLAVKESNKEWMIGEEAIRISSLGGSFLIENLLENLEHQESITIYGAIFTPVMLLTKFFKKAFMVVRQQFLNSSIQELVITVPNLTPNMTEMIYLSLEELGLLRDRVHIISQVQSYMYYVLSQKPEIWMHDVSLFTYDETGLFYYNLTVNRRMQPFTVIVDLMDLSNELTHEIFEQEPIERILYRLEKLMNQVLYRRLTSAVFVTGRGFEGNWVRDVLVRLSSSRRVFLGQNLYAKGACLAAKGFLDDSFQNYLFLNDEMITSNISLRLYENAKEVDFCLVKAGIPWRKANNTVTVILDQTKELAFIVTNLLNREPLYEVLSLDGLMERENKTIRLSVTVHFIDRETAIVTVRDVGFGVFYETNYRIWEQTLTL
SIO_010081: CPHY_RS02530
subclass of: SO_0000673
so part of: CPHY_RS02530
location: 585371..586633
location: region:585371-586633:1
so has part: feature:585371-586633:1:exon

WP_012198489.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:585371-586633:1:exon

CPHY_RS02535
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02535
old locus tag: Cphy_0459
so part of: sequence
location: 586714..587550
location: region:586714-587550:1
so has part: feature:586714-587550:1:exon
subclass of: SO_0000010

position:586714:1
position: 586714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:587550:1
position: 587550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:586714-587550:1:exon

CPHY_RS02535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02535
old locus tag: Cphy_0459
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGKLILCAGRTAEKPYCFKLTGTPVYTIEELCYYIYHNLESVSEELFNQELIDFIGEDLGLKERANFLEELLRKKSGIKDLVVSILCSCDLYDKTEINQLLAEIDILFRLTPIQRKKRQADFCLSHHKYKEAMKEYLAILNSREFTDLTSEEYGDILHNMGVLEARTGAFTVAADKFRGAYERNHNEKSLKQYLYALKCSKQETLYEREVKILVGNRELLMQMEEELYHAWDASEYTGLYAEVVRLSELKENGKYTEFYERLNELVKQLKIEYRKDSI
SIO_010081: CPHY_RS02535
subclass of: SO_0000673
so part of: CPHY_RS02535
location: 586714..587550
location: region:586714-587550:1
so has part: feature:586714-587550:1:exon

WP_012198490.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:586714-587550:1:exon

CPHY_RS02540
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02540
old locus tag: Cphy_0460
so part of: sequence
location: 587565..588851
location: region:587565-588851:1
so has part: feature:587565-588851:1:exon
subclass of: SO_0000010

position:587565:1
position: 587565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:588851:1
position: 588851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:587565-588851:1:exon

CPHY_RS02540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02540
old locus tag: Cphy_0460
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGLFSSRKKNKEDKRINNTDFVQMSVEEALEKLSGSSVAQTPFNIEEENLSFLEKKRRKKEQAKNKKSNNVEGKGINPYQGEIKEENINDVIKGHKSQILELTAQLEETKQEYEAVTSYLSDIQKIEQIPDGQKKPYLDAANKIINFEKERKKYLNIDRKLSEAQFAEMNRLEDDIKRELPKLKDQEHYQQLIKEDLRQLEGEKGVLNYDREQAISKVKFLKQLAIGGFVMILLLFAGLFLLDNAVEADLSLPILMTVFLGVILVAYIIYDTRRCSYKQKMAELKLNRAVSLINKVKLKYVNCTAMLDYSYEKYHTTGHQELMARYQLFLKEREELERLEQNTELLGYYQEELVIELRKHGIDDAEVWGYQAEALLDKKEMVEVRHRLNGRRQKLREHIDLCAKQLDLVRNSLEGIRTRNPEYESEMV
SIO_010081: CPHY_RS02540
subclass of: SO_0000673
so part of: CPHY_RS02540
location: 587565..588851
location: region:587565-588851:1
so has part: feature:587565-588851:1:exon

WP_012198491.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:587565-588851:1:exon

CPHY_RS02545
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02545
old locus tag: Cphy_0461
so part of: sequence
location: complement(589088..589747)
location: region:589088-589747:-1
so has part: feature:589088-589747:-1:exon
subclass of: SO_0000010

position:589088:-1
position: 589088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589747:-1
position: 589747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:589088-589747:-1:exon

CPHY_RS02545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02545
old locus tag: Cphy_0461
inference: COORDINATES: protein motif:HMM:NF025636.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TetR/AcrR family transcriptional regulator
translation: MAEKNNQRVKLSKMLLKNSLIQIMHEKPVEKITIKELCENAGINRSTFYLYYTDPVSLLAELENEVLDNAKIFLGKVDSNQDSLPYLITFLDYIKDNSMIFNTLLRPQENLSFQTKFMKDILAHLKAAVMLNCPPDISEYIYNYVIMGSLSVIQHWIQCDYNIKSNEMATLIYQLSNTAIMNYVPNNSKVNQATASNPTIRTSSQTNQTSRTISQSMTT
SIO_010081: CPHY_RS02545
subclass of: SO_0000673
so part of: CPHY_RS02545
location: complement(589088..589747)
location: region:589088-589747:-1
so has part: feature:589088-589747:-1:exon

WP_012198492.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:589088-589747:-1:exon

CPHY_RS02550
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02550
old locus tag: Cphy_0462
so part of: sequence
location: 590029..591552
location: region:590029-591552:1
so has part: feature:590029-591552:1:exon
subclass of: SO_0000010

position:590029:1
position: 590029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:591552:1
position: 591552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:590029-591552:1:exon

CPHY_RS02550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02550
old locus tag: Cphy_0462
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020073477.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)-dependent oxidoreductase
translation: MRKTRILLTGATGTMGYSVLKELVNELDKFELILLVRDTDNKKELIQPYKKLSGVTIYWGDLTNYKDVFECVRHADIILHVAAFVSPAADYYPLLAMKTNYGSTKNILTAIREQGRMEKVKLVYIGTVAETGDRIPPIHWGRVGDPIKPSIFDYYAVSKVAAERIVIESGLTYWVSLRQTGIMGPAMSKINDPILFHNGLDNVLEYVSDRDSGRLLRNLCSLDYEEELSPEFWNHIYNIGGGESCRVDTYSMFEDIFGAIGIKDLDYVISPRWFATKNFHGQYYLDSDKLEEFLHFRQDSMQYFYEEYIKNLGVTASLSKVICKIPGGQKIMGSILKKVFLKMARTEHGTVHFVENNMENQISAYWGSKDKWKQLPTSIHDLERPKDWNRVIVLDHGYEEEKPENKLDLSDIKEAAVFRGGKVNSISMQVGDLRTPLTLTCAFGHTFEASPRLILEGGHWCPVCERESWNYGRRAKIDPFFAQVWDPLHEGEASFMEYKKEVNELMV
SIO_010081: CPHY_RS02550
subclass of: SO_0000673
so part of: CPHY_RS02550
location: 590029..591552
location: region:590029-591552:1
so has part: feature:590029-591552:1:exon

WP_012198493.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:590029-591552:1:exon

CPHY_RS02555
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02555
old locus tag: Cphy_0463
so part of: sequence
location: complement(591657..592304)
location: region:591657-592304:-1
so has part: feature:591657-592304:-1:exon
subclass of: SO_0000010

position:591657:-1
position: 591657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592304:-1
position: 592304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:591657-592304:-1:exon

CPHY_RS02555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02555
old locus tag: Cphy_0463
EC number: 1.11.1.24
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014117922.1
GO function: GO:0051920 - peroxiredoxin activity [Evidence IEA]; GO:0008379 - thioredoxin peroxidase activity [Evidence IEA]
GO process: GO:0098869 - cellular oxidant detoxification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peroxiredoxin
translation: MEINHLSIGMTAPDFTAVTTFGPLKMSDFKGRWVVLFSHPGDFTPVCTSEFLAFAQNAPEFDKLNANLVGLSIDSNPSHLAWVNSIYLNTGVQVPFPVIADRSGDIARLYGMLAPDVSTTQTVRNVFFIDPKQIIRAILIYPLTNGRCISEILRLLQALQTTDEFNVVTPACWQPGEPAMVPAPATYEQLVERESNPTGEGLECKDWYWCYKSIE
SIO_010081: CPHY_RS02555
subclass of: SO_0000673
so part of: CPHY_RS02555
location: complement(591657..592304)
location: region:591657-592304:-1
so has part: feature:591657-592304:-1:exon

WP_012198494.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:591657-592304:-1:exon

CPHY_RS02565
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02565
old locus tag: Cphy_0464
so part of: sequence
location: complement(592816..593595)
location: region:592816-593595:-1
so has part: feature:592816-593595:-1:exon
subclass of: SO_0000010

position:592816:-1
position: 592816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:593595:-1
position: 593595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:592816-593595:-1:exon

CPHY_RS02565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02565
old locus tag: Cphy_0464
inference: COORDINATES: protein motif:HMM:NF024242.2
GO function: GO:0043565 - sequence-specific DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AraC family transcriptional regulator
translation: MKLFYENKSRTFNLYQGTNMTFPPHLHKEIEILICQKGVVEATCNGQTLLLEESDIMIALPNTIHSYETKEYCEYILCILSPSTLPLFKPYFQKEFTTPFLQMDQTKKITPFVRMLLEEWENDRNQELMISYLSVIFSLILKNTTFTEKATSTYEDILPSILLYVDEHYLEQFSLEDLASHLGFNPSYVSRLFSERVHCTLTHYVMELRVNYAKHLLQNTEKSITEIAYECGFATQRSFNRVFLQLVNTTPREYRKTYL
SIO_010081: CPHY_RS02565
subclass of: SO_0000673
so part of: CPHY_RS02565
location: complement(592816..593595)
location: region:592816-593595:-1
so has part: feature:592816-593595:-1:exon

WP_012198495.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:592816-593595:-1:exon

CPHY_RS02570
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02570
old locus tag: Cphy_0465
so part of: sequence
location: 593928..594581
location: region:593928-594581:1
so has part: feature:593928-594581:1:exon
subclass of: SO_0000010

position:593928:1
position: 593928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:594581:1
position: 594581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:593928-594581:1:exon

CPHY_RS02570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02570
old locus tag: Cphy_0465
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006778257.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ThuA domain-containing protein
translation: MMKKVLMVQGGWDGHEPVLVSQVFQKMLEKEGSSVEVHDTLECLSDAEKLKSYDLIVPIWTMGTIPSNYVHNVSVAVASGTGLAGCHGGMCDAFRNEVEWQFMTGAQWVAHPGNDGVEYMVHVSNDDYFTKGLSDFKVCSEQYYIHIDPAIKIYATTTFPVVDGPHASNGNVEIPVVYTKMWGEGKVFYTSLGHHADIFDIPEAYEIMRRGFLYAVR
SIO_010081: CPHY_RS02570
subclass of: SO_0000673
so part of: CPHY_RS02570
location: 593928..594581
location: region:593928-594581:1
so has part: feature:593928-594581:1:exon

WP_198301330.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:593928-594581:1:exon

CPHY_RS02575
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02575
old locus tag: Cphy_0466
so part of: sequence
location: 594661..595767
location: region:594661-595767:1
so has part: feature:594661-595767:1:exon
subclass of: SO_0000010

position:594661:1
position: 594661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:595767:1
position: 595767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:594661-595767:1:exon

CPHY_RS02575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02575
old locus tag: Cphy_0466
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004629062.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Gfo/Idh/MocA family oxidoreductase
translation: MEKVNVAVIGCGNISDIYMQNITNLFVNLNLYAVCDLEVEKAKAAAEKFQIENVLTYDEIMQSPEITVILNLTTPKSHYSICKDALLAGKHVYVEKPLSLKLEEGKELVSLAKEKKRLLGCAPDTFLGAGIQTCIKAINDGYIGEVIGATAFMMCHGHESWHPDPEFYYQIGGGPMFDMGPYYLTALVSMIGPVKEVVGMNSISFPTRTITSEKKFGEIVPVEVPTHVTGLLRFENGAIGNIITSFDVWGSTLPRIEVYGTRGSLIVPDPNCFDGEVLIKQYFSKSFEAFPLSSIYNMNSRGAGLSEMANCIINQTDNNRASGELACHVLEIMHALHTSQETKSFVELSTCCESPRPLEMNLIKGSIS
SIO_010081: CPHY_RS02575
subclass of: SO_0000673
so part of: CPHY_RS02575
location: 594661..595767
location: region:594661-595767:1
so has part: feature:594661-595767:1:exon

WP_012198497.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:594661-595767:1:exon

CPHY_RS02580
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02580
old locus tag: Cphy_0467
so part of: sequence
location: 596301..597020
location: region:596301-597020:1
so has part: feature:596301-597020:1:exon
subclass of: SO_0000010

position:596301:1
position: 596301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:597020:1
position: 597020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:596301-597020:1:exon

CPHY_RS02580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02580
old locus tag: Cphy_0467
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012059428.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MBL fold metallo-hydrolase
translation: MKVTYIYHSCFTVEEKDVVLIFDYFKGDLPKFDSEKKIYVFSSHKHADHFSRIIFDLVKGYKNISFLLSNDIKMNEKYMERVQIPEEARDKIQNLRKNETYQITEDLKVETLTSTDQGVAFVVTLFGKTIYFAGDLNWWTWKGETEEEYQDMTKRFLTEIEKLKGRHLDLAFLPLDGRQEERFYLGFDHVMREAEVINAFPMHYWEKPDVIQRLKEMEVSKDYRDRIFDVMEPGQVFEC
SIO_010081: CPHY_RS02580
subclass of: SO_0000673
so part of: CPHY_RS02580
location: 596301..597020
location: region:596301-597020:1
so has part: feature:596301-597020:1:exon

WP_012198498.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:596301-597020:1:exon

CPHY_RS02585
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02585
old locus tag: Cphy_0468
pseudo: true
so part of: sequence
location: <597088..597909
location: region:597088-597909:1
so has part: feature:597088-597909:1:exon
subclass of: SO_0000010

position:597088:1
position: 597088
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:597909:1
position: 597909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:597088-597909:1:exon

CPHY_RS02585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02585
old locus tag: Cphy_0468
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014466331.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: CPHY_RS02585
subclass of: SO_0000673
so part of: CPHY_RS02585
location: <597088..597909
location: region:597088-597909:1
so has part: feature:597088-597909:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:597088-597909:1:exon

CPHY_RS02590
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02590
old locus tag: Cphy_0469
so part of: sequence
location: 598077..598439
location: region:598077-598439:1
so has part: feature:598077-598439:1:exon
subclass of: SO_0000010

position:598077:1
position: 598077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:598439:1
position: 598439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:598077-598439:1:exon

CPHY_RS02590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02590
old locus tag: Cphy_0469
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009081719.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VOC family protein
translation: MNFKFAHNNFNVLNLEKSLTFYEEALGLKEVKRHESKDFTLVYLGDGSTTHCLELTYLHDRTEAYNLGENEFHLAFVVDDYEAALKKHKEMDCVIYENEAMRIYFIVDPDGYWLEVVPGK
SIO_010081: CPHY_RS02590
subclass of: SO_0000673
so part of: CPHY_RS02590
location: 598077..598439
location: region:598077-598439:1
so has part: feature:598077-598439:1:exon

WP_012198500.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:598077-598439:1:exon

CPHY_RS02595
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02595
old locus tag: Cphy_0470
so part of: sequence
location: 598668..598913
location: region:598668-598913:1
so has part: feature:598668-598913:1:exon
subclass of: SO_0000010

position:598668:1
position: 598668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:598913:1
position: 598913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:598668-598913:1:exon

CPHY_RS02595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02595
old locus tag: Cphy_0470
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MILCTAGYVIQRNNRAHEDIEVIHMEVDRVVYHNLTELMNASDLVVIGEYCQDTEQLIEYSFSNEFNKNVITDMISTISYR
SIO_010081: CPHY_RS02595
subclass of: SO_0000673
so part of: CPHY_RS02595
location: 598668..598913
location: region:598668-598913:1
so has part: feature:598668-598913:1:exon

WP_157668642.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:598668-598913:1:exon

CPHY_RS02600
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02600
old locus tag: Cphy_0471
so part of: sequence
location: 598994..599428
location: region:598994-599428:1
so has part: feature:598994-599428:1:exon
subclass of: SO_0000010

position:598994:1
position: 598994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:599428:1
position: 599428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:598994-599428:1:exon

CPHY_RS02600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02600
old locus tag: Cphy_0471
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MITFSDMTPMNKGEQWIFFLSYDEINETYWCTGDYTGRHPVPNEKIISICDDASSLIKERNEILNTKERISDSQLESSNEYVYTDLNGINYCLQTNEEAEKVISMDNKILACKNKLKASNFGLFRQNLINIELYCDILNELNVH
SIO_010081: CPHY_RS02600
subclass of: SO_0000673
so part of: CPHY_RS02600
location: 598994..599428
location: region:598994-599428:1
so has part: feature:598994-599428:1:exon

WP_041703115.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:598994-599428:1:exon

misc_binding
type: Miscellaneous Binding Site
subclass of: SO_0000409
RO_0002162: 357809
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00230
inference: COORDINATES: profile:INFERNAL:1.1.4
note: T-box leader; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: tRNA
so part of: sequence
location: 599497..599784
location: region:599497-599784:1
so has part: feature:599497-599784:1:region

position:599497:1
position: 599497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:599784:1
position: 599784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:599497-599784:1:region

CPHY_RS02605
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02605
old locus tag: Cphy_0472
so part of: sequence
location: 599953..602631
location: region:599953-602631:1
so has part: feature:599953-602631:1:exon
subclass of: SO_0000010

position:599953:1
position: 599953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:602631:1
position: 602631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:599953-602631:1:exon

CPHY_RS02605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02605
old locus tag: Cphy_0472
EC number: 6.1.1.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009255751.1
GO function: GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: valine--tRNA ligase
translation: MQKELAKTYDPKDIEGRLYEKWLEKKYFHAEVDKTKKPFTIVIPPPNITGQLHMGHALDNTMQDILIRFKRMQGFNALWQPGTDHASIATEVKIIEALKKEGIDKDQLGREGFLKRAWEWKDEYGGRIIGQLKKLGSSCDWDRERFTMDEGCSKAVEEVFVKMYEKGMIYKGSRIINWCPVCHTSISDAEVEYEDQAGHFWHIKYPVVGTDEYLCFATTRPETMLGDTAVAVHPEDGRYMHLIGKKVKLPFVDREIPIIGDSYVEKDFGTGVVKITPAHDPNDFEVGKRNNLPEINIMNDDATINANGGKFEGMDRYAARKQIVKELDEMGLLVKVEDYSHNVGTHDRCNTTIEPLIKQQWFVKMDELIKPAVEAVKNKDIELVPERMEKVYFNWTDNIRDWCISRQLWWGHRIPAYYCDKCGKVVVSKTTPTTCECGHDHFTQDPDTLDTWFSSALWPFSTLGWPEKTEDLEYFYPTDVLVTGYDIIFFWVIRMIFSGYEQMNEKPFKTVLFHGLVRDSQGRKMSKSLGNGIDPLEIIEQYGADALRFMLITGNATGNDMRFYMERVEAARNFANKVWNASRFIMMNMQQMEEAGMDAKVDSVDMSTLTDADKWIISKVNTLTKDVTEHLEKFDLGIAAQKVYDFIWEEFCDWYIEMVKPRLYGDDQATKTAAIYTLRTVLDSALKLLHPYMPFITEEIFCTLKEMEGRLSADESVMISKWPEYKEEFNFAKEEEAVEIIKEAVKAIRNARTEMNVPPSRKAKVIVVSDSEKVREIFANSKVFFASLGYASEIVIQSDKNGIDSDAVSIVTATATIYIPFADLVDIEKEIERLSKEKDRLAGELKRVNGMLANPNFVSKAPEAKLAEERAKLEKYASMMAQVEERLAHFKK
SIO_010081: CPHY_RS02605
subclass of: SO_0000673
so part of: CPHY_RS02605
location: 599953..602631
location: region:599953-602631:1
so has part: feature:599953-602631:1:exon

WP_012198503.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:599953-602631:1:exon

CPHY_RS02610
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02610
old locus tag: Cphy_0473
so part of: sequence
location: 602764..604167
location: region:602764-604167:1
so has part: feature:602764-604167:1:exon
subclass of: SO_0000010

position:602764:1
position: 602764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:604167:1
position: 604167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:602764-604167:1:exon

CPHY_RS02610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02610
old locus tag: Cphy_0473
inference: COORDINATES: protein motif:HMM:NF015894.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FapA family protein
translation: MSDWSRPTKELMYKKTKVDLRYDKMEAYITLYAPVGKDRYTKEMIYEILRFHHVIYGIDEEVVNKLCEKPCYGKEILIAKGKEEVDGKDGYFVYFFDTRVDTKPRILEDGSVDYFAMTRIVTVSQGEIIVRYHKAIQGSNGIDVCGSIRYGNIGRDLPPLKGKGFKLSDDRLIYTALITGKIEVSEGRITISNVLEIKENIDYLQGDIYFKGDLMIYGDISSGKVVESEGSIVVRGHVEGATIRAGKNVILENGMQGAGKGSITCGGSISGKFFEQVEMKAKENITANTIMNCTMTAGNEIIVTGRRGILLGGSAYAGRKITASIIGNHTHINTELVVGVRRSFHRKFAYLERKISELKERLSQVEAAIAMINERELPDVISPLRDQKMRLLRTKININSEIAEMVDEWSDLMDFIKNSKSAKIIVNKMIYPGCKLAINGLSMGIKQEIVSSYFLRNGDDIDMIPFI
SIO_010081: CPHY_RS02610
subclass of: SO_0000673
so part of: CPHY_RS02610
location: 602764..604167
location: region:602764-604167:1
so has part: feature:602764-604167:1:exon

WP_012198504.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:602764-604167:1:exon

CPHY_RS21570
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS21570
old locus tag: Cphy_0474
so part of: sequence
location: 604637..604831
location: region:604637-604831:1
so has part: feature:604637-604831:1:exon
subclass of: SO_0000010

position:604637:1
position: 604637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:604831:1
position: 604831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:604637-604831:1:exon

CPHY_RS21570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS21570
old locus tag: Cphy_0474
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQKLYALDESQCSIEKRYPMINFDEEIAKFQPSLEVDQAEEAIFNNDLTDITDMIESILNEKKG
SIO_010081: CPHY_RS21570
subclass of: SO_0000673
so part of: CPHY_RS21570
location: 604637..604831
location: region:604637-604831:1
so has part: feature:604637-604831:1:exon

WP_157668643.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:604637-604831:1:exon

CPHY_RS02615
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02615
old locus tag: Cphy_0475
so part of: sequence
location: 604922..606331
location: region:604922-606331:1
so has part: feature:604922-606331:1:exon
subclass of: SO_0000010

position:604922:1
position: 604922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:606331:1
position: 606331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:604922-606331:1:exon

CPHY_RS02615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02615
old locus tag: Cphy_0475
inference: COORDINATES: protein motif:HMM:NF025910.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MNCPKCGNVVAVRRNRCEFCGKDLTIVRKTDRLSNTYYNRGLEKAKVRDLTGAIIMLKKSLEMNKRNTNARNLLGLVFFEMGETVAALSEWVISKHFQAKDNDADVYIGAVQANPTKLDSMNQAIKKYNIALDSAKQGSDDLAIIQLKKVINLNPHFIRALQLLALIYMKNNEFERARRCLVKANKIDLANTTTLRYLSELNQLVSGGETTSTPYWSDGEVNPDPLGKPLSPISSYREEKPNVWLFINLILGVVIGVSVLFFLIVPTVKKNAQSEYLQKQRDFDSDLLVYRTKLTSSEKEVEDLKAKLADKQKELDNIDIPEYDKTMYDSILSAVYRYMELESTNSLTPENTMEVADLLSKVDPSKMENQDAVKLFEMVKEKVSPIAAKEAYQQGRAAFEKKDYEKALTLLTQAYSFGDPDDNTLYYLGKTEQELGQYEEAKAYYNQMLESFPNSSLAKYAKQRVNDLE
SIO_010081: CPHY_RS02615
subclass of: SO_0000673
so part of: CPHY_RS02615
location: 604922..606331
location: region:604922-606331:1
so has part: feature:604922-606331:1:exon

WP_012198506.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:604922-606331:1:exon

CPHY_RS02620
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: spoIIAA
locus tag: CPHY_RS02620
old locus tag: Cphy_0476
so part of: sequence
location: 606489..606851
location: region:606489-606851:1
so has part: feature:606489-606851:1:exon
subclass of: SO_0000010

position:606489:1
position: 606489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:606851:1
position: 606851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:606489-606851:1:exon

CPHY_RS02620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: spoIIAA
locus tag: CPHY_RS02620
old locus tag: Cphy_0476
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012159648.1
GO function: GO:0045152 - antisigma factor binding [Evidence IEA]
GO process: GO:0030436 - asexual sporulation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: anti-sigma F factor antagonist
translation: MWLDYQKVGCADFEIRKSTLIIHMKEDLDHHSAIFIREQADKLIEQKNVKNVIFDFNKVSFMDSSGIGVIMGRYKKLLHVGGGTLAVIGVSDRIDRILRLSGLYKIMNRYQDMQEALNCM
SIO_010081: CPHY_RS02620
subclass of: SO_0000673
so part of: CPHY_RS02620
location: 606489..606851
location: region:606489-606851:1
so has part: feature:606489-606851:1:exon

WP_041703116.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:606489-606851:1:exon

CPHY_RS02625
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: spoIIAB
locus tag: CPHY_RS02625
old locus tag: Cphy_0477
so part of: sequence
location: 606946..607374
location: region:606946-607374:1
so has part: feature:606946-607374:1:exon
subclass of: SO_0000010

position:606946:1
position: 606946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:607374:1
position: 607374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:606946-607374:1:exon

CPHY_RS02625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: spoIIAB
locus tag: CPHY_RS02625
old locus tag: Cphy_0477
EC number: 2.7.11.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018597825.1
GO function: GO:0004672 - protein kinase activity [Evidence IEA]
GO process: GO:0030436 - asexual sporulation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: anti-sigma F factor
translation: MECDNEMVLEFDALSKNESFARTVVAAFAAQLNPTIEELADIKTAVSEAVTNCIIHGYDNKKGKIKLYCAITGIELVIEVSDYGVGIENIPLAMEPMFTSRPELERSGMGFSFMDAFMDELTVNSTVSIGTTVRMKKRISTT
SIO_010081: CPHY_RS02625
subclass of: SO_0000673
so part of: CPHY_RS02625
location: 606946..607374
location: region:606946-607374:1
so has part: feature:606946-607374:1:exon

WP_041703863.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:606946-607374:1:exon

CPHY_RS02630
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: sigF
locus tag: CPHY_RS02630
old locus tag: Cphy_0478
so part of: sequence
location: 607389..608126
location: region:607389-608126:1
so has part: feature:607389-608126:1:exon
subclass of: SO_0000010

position:607389:1
position: 607389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:608126:1
position: 608126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:607389-608126:1:exon

CPHY_RS02630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: sigF
locus tag: CPHY_RS02630
old locus tag: Cphy_0478
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008118378.1
GO function: GO:0016987 - sigma factor activity [Evidence IEA]
GO process: GO:0030436 - asexual sporulation [Evidence IEA]; GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA polymerase sporulation sigma factor SigF
translation: MVEGRSFVDTLDLIRLSKQGDKVARDRVVTENVGLVWSIVRRFMGRGHEAEDLFQIGSIGLMKAIDKFDLSYDVKFSTYAVPMITGEIKRFLRDDGMIKVSRSLKETAGKIRLMRETLESKNGREPTIEEIGEALELAKEEVVMALESGAEVESLYKTIYQGDGNAIFLIDKIEQTDDASDEMIDHMALREVMDSLDEKEKDIIRLRYFKDKTQTEIAKQLGISQVQVSRLERKILRTMRERMLG
SIO_010081: CPHY_RS02630
subclass of: SO_0000673
so part of: CPHY_RS02630
location: 607389..608126
location: region:607389-608126:1
so has part: feature:607389-608126:1:exon

WP_041703118.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:607389-608126:1:exon

CPHY_RS21575
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS21575
so part of: sequence
location: 608494..608652
location: region:608494-608652:1
so has part: feature:608494-608652:1:exon
subclass of: SO_0000010

position:608494:1
position: 608494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:608652:1
position: 608652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:608494-608652:1:exon

CPHY_RS21575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS21575
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKAKKICVMSLIVLAVVIVVGCVCYYTKNTKQVFEGTFICIDKLIGGLYGKR
SIO_010081: CPHY_RS21575
subclass of: SO_0000673
so part of: CPHY_RS21575
location: 608494..608652
location: region:608494-608652:1
so has part: feature:608494-608652:1:exon

WP_157668644.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:608494-608652:1:exon

CPHY_RS02635
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: spoVAC
locus tag: CPHY_RS02635
old locus tag: Cphy_0479
so part of: sequence
location: 608639..609142
location: region:608639-609142:1
so has part: feature:608639-609142:1:exon
subclass of: SO_0000010

position:608639:1
position: 608639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:609142:1
position: 609142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:608639-609142:1:exon

CPHY_RS02635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: spoVAC
locus tag: CPHY_RS02635
old locus tag: Cphy_0479
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007886673.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0030436 - asexual sporulation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: stage V sporulation protein AC
translation: MANDKNKVSASQVANEKDQQERDKLYNQYVKQVTPKHSWFTNMCKAFVSGGIICAIGQGFINFYSSYGAEKELAGAYTTMSLVLLSIIFTGFNWYQKIAKFAGAGILVPITGFANSVAAPAIEFKKEGQVFGIGCKIFTIAGPVILYGIFSSWLLGLVYYIFTMFQK
SIO_010081: CPHY_RS02635
subclass of: SO_0000673
so part of: CPHY_RS02635
location: 608639..609142
location: region:608639-609142:1
so has part: feature:608639-609142:1:exon

WP_012198510.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:608639-609142:1:exon

CPHY_RS02640
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: spoVAD
locus tag: CPHY_RS02640
old locus tag: Cphy_0480
so part of: sequence
location: 609211..610278
location: region:609211-610278:1
so has part: feature:609211-610278:1:exon
subclass of: SO_0000010

position:609211:1
position: 609211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:610278:1
position: 610278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:609211-610278:1:exon

CPHY_RS02640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: spoVAD
locus tag: CPHY_RS02640
old locus tag: Cphy_0480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016291670.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0030436 - asexual sporulation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: stage V sporulation protein AD
translation: MTQTTAKQSKMVGKQSVQFSNPPAIIGCASVAGQKEGEGPLGAFFDVIEEDPMFGQKTWEEAESKMLGMAVDVAIHNAGLKKSDIRYLVGGDLLGQLIATSFGIENFEIPLIGVYGACSTMGESIVVASMIIDGGFADRTLAITSSHFAGAEKQFRFPLAYGNQRPKAASWTVTGSGAVILGHEPEKDSEFAKQFSPVMIKVKGITIGKIVDYGIKDSLNMGACMAPAACETIAQNLKDFSIQPDYYDRIITGDLGMIGKDILIDLLKEKGYDISSNHMDCGIEIFDSEAQDTHAGGSGCGCSAITLTGYILQKLRKRDWNRVLFVPTGALLSTVSYNEGQSVPGIAHAVMLESC
SIO_010081: CPHY_RS02640
subclass of: SO_0000673
so part of: CPHY_RS02640
location: 609211..610278
location: region:609211-610278:1
so has part: feature:609211-610278:1:exon

WP_012198511.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:609211-610278:1:exon

CPHY_RS02645
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
gene: spoVAE
locus tag: CPHY_RS02645
old locus tag: Cphy_0481
so part of: sequence
location: 610291..610647
location: region:610291-610647:1
so has part: feature:610291-610647:1:exon
subclass of: SO_0000010

position:610291:1
position: 610291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:610647:1
position: 610647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:610291-610647:1:exon

CPHY_RS02645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
gene: spoVAE
locus tag: CPHY_RS02645
old locus tag: Cphy_0481
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006442835.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0030436 - asexual sporulation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: stage V sporulation protein AE
translation: MDYLISFLVGGAICAIVQVVMDNTKLMPGRIMVILVCLGALLGAIGVYQPFAEWAKAGASVPLLGFGSVLFKGIKEGVDKEGFIGLFKGGFTSSAVGISSALIFGYIASLIFNPKMKE
SIO_010081: CPHY_RS02645
subclass of: SO_0000673
so part of: CPHY_RS02645
location: 610291..610647
location: region:610291-610647:1
so has part: feature:610291-610647:1:exon

WP_012198512.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:610291-610647:1:exon

CPHY_RS02650
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02650
old locus tag: Cphy_0482
so part of: sequence
location: 611115..611612
location: region:611115-611612:1
so has part: feature:611115-611612:1:exon
subclass of: SO_0000010

position:611115:1
position: 611115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:611612:1
position: 611612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:611115-611612:1:exon

CPHY_RS02650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02650
old locus tag: Cphy_0482
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNLKGKGIGMQTIIRQIKGRIILDNANHCHIYNCEVYDVGMEGIHLRDNSSSNIVDMCTITDTGKVNTGYSGANYADSFIDVKGNNAIIRNNTCNRNNNSNIVDAFQGSEQLSGWGKNNDFYSNTVNLDQSSGYVLKITGNTTAKASNNTRIPAGNMYSGNITQY
SIO_010081: CPHY_RS02650
subclass of: SO_0000673
so part of: CPHY_RS02650
location: 611115..611612
location: region:611115-611612:1
so has part: feature:611115-611612:1:exon

WP_049762281.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:611115-611612:1:exon

CPHY_RS02655
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02655
old locus tag: Cphy_0483
so part of: sequence
location: 612076..612411
location: region:612076-612411:1
so has part: feature:612076-612411:1:exon
subclass of: SO_0000010

position:612076:1
position: 612076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:612411:1
position: 612411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:612076-612411:1:exon

CPHY_RS02655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02655
old locus tag: Cphy_0483
inference: COORDINATES: protein motif:HMM:NF014376.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cupin domain-containing protein
translation: MAVYKELDSKYEVLVEGKSGRRIKGYDGSLMMVEVYFENHYISEKHTHEHEQMTYCLEGTFEFYIGDKVERISAGDTIYFPSNIEHHCAVITETGRLLDVFTPIRKDFIQE
SIO_010081: CPHY_RS02655
subclass of: SO_0000673
so part of: CPHY_RS02655
location: 612076..612411
location: region:612076-612411:1
so has part: feature:612076-612411:1:exon

WP_012198514.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:612076-612411:1:exon

CPHY_RS02660
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02660
old locus tag: Cphy_0484
so part of: sequence
location: 612448..613455
location: region:612448-613455:1
so has part: feature:612448-613455:1:exon
subclass of: SO_0000010

position:612448:1
position: 612448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:613455:1
position: 613455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:612448-613455:1:exon

CPHY_RS02660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02660
old locus tag: Cphy_0484
inference: COORDINATES: protein motif:HMM:NF012742.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: substrate-binding domain-containing protein
translation: MDQTKITITNVAEFAGVSKSLVSSYLNGRFDNMSEATRKRIEETIQSLGYEPKEQYRNFKKRERGIIGLILPDITDPFYSLCSKAIADGALNHDYMVLFANSDNNVGVENTYLDKFSECTDGIIIATVGRNDQQIMQLKDKVPVVLLDRRMKEGMFDGVSSNNYESTMDMMKYLISLGYEAFGFFVEELVEGMSRVIRYQSYMDFIKEHNLYDASFIYNVNLYDEMTMISNLIEFREQTKGKKAVIICANGKTLLHVITGVDALKINVPNDIGICGYDDFEAAALIHSGITTINQPTYDIGYACVKQLVKRINQNGDYTPKEINLRSKLVIRGSV
SIO_010081: CPHY_RS02660
subclass of: SO_0000673
so part of: CPHY_RS02660
location: 612448..613455
location: region:612448-613455:1
so has part: feature:612448-613455:1:exon

WP_012198515.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:612448-613455:1:exon

CPHY_RS02665
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02665
old locus tag: Cphy_0485
so part of: sequence
location: 613468..614448
location: region:613468-614448:1
so has part: feature:613468-614448:1:exon
subclass of: SO_0000010

position:613468:1
position: 613468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:614448:1
position: 614448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:613468-614448:1:exon

CPHY_RS02665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02665
old locus tag: Cphy_0485
inference: COORDINATES: protein motif:HMM:NF012738.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease subunit
translation: MKDKRKKIATRKTPFAKGYIRSIKKDWRLWLLIIPLLLWLYFFAYRPMYGIYIAFLKYSPFKGIEGSAFIGLENFRNLMFGPSSEYFWRAFKNTILISTYGLAFSFPMPIIFALLLHEVKSNKSRKLVQTITYAPHFISEVIVCSLVLTMLSLNTGLFNVLLEKLFALFGQEFTPIHFMAKSEYFRSIYTISGIWKEVGFSSIVFFAALCGIPNELYEAAKVDGATRLRQIWSISIPGILPTIVIMLIIRVGNILNVGYEKVLLLYNPGIYDRADILSTYIYRLGVQNNPNYGVSTAASLINSLIGFAMVIMANRIAKKFSQTSLW
SIO_010081: CPHY_RS02665
subclass of: SO_0000673
so part of: CPHY_RS02665
location: 613468..614448
location: region:613468-614448:1
so has part: feature:613468-614448:1:exon

WP_012198516.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:613468-614448:1:exon

CPHY_RS02670
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02670
old locus tag: Cphy_0486
so part of: sequence
location: 614460..615353
location: region:614460-615353:1
so has part: feature:614460-615353:1:exon
subclass of: SO_0000010

position:614460:1
position: 614460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:615353:1
position: 615353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:614460-615353:1:exon

CPHY_RS02670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02670
old locus tag: Cphy_0486
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013270840.1
GO process: GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbohydrate ABC transporter permease
translation: MERVRKKKMKQSLGDKTFDFVKNFILIVLTIACLYPLIYVFSCSISSGSAVDSGKVLLFPKDINFESYKQVLTDKQFWVSYGNTFYYTIFGSLFSMLVSAPAAYVLSKKRFRARKVINILLSFTMWFSPGFIPLYLNYSELGVTNNRFMILISFGIQAFNIILLRNYFESIPEEMEESANVDGSNDFITFVKIYLPLSKASMATVWMYYAMSRWNGYFWSTILIKDMKKIPLQVYLKQKIIDQSLVSEFANTIAGQKYSYNTIIYALVACSIVPVLIIYPFIQRYFVKGVMVGGVKG
SIO_010081: CPHY_RS02670
subclass of: SO_0000673
so part of: CPHY_RS02670
location: 614460..615353
location: region:614460-615353:1
so has part: feature:614460-615353:1:exon

WP_012198517.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:614460-615353:1:exon

CPHY_RS02675
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02675
old locus tag: Cphy_0487
so part of: sequence
location: 615427..617103
location: region:615427-617103:1
so has part: feature:615427-617103:1:exon
subclass of: SO_0000010

position:615427:1
position: 615427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:617103:1
position: 617103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:615427-617103:1:exon

CPHY_RS02675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02675
old locus tag: Cphy_0487
inference: COORDINATES: protein motif:HMM:NF013697.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: extracellular solute-binding protein
translation: MRLKKVMCVTLAAAMLMGSLAGCAKKDNKVDNPSVTQPATDENNKGSDDNKENTDAPVANAEPVELKIHFHSNNKYTLLDENGKLLPVFALAGEKTNSIVESTANPVAQNSIEEFQLQAAEKFPADIYGGTSLRSSITSYAYQGAFLPLNDLIDQYAPNLKKFLDENPDVKAAHTAADGNIYMLNYCPDGDVARVYFIRTDWLDKLGLSMPTTFEELENVLYAFKNNDPNGNGLKDEVPVFNDKWEELIRLANLWGARVYGFDTFTERVVLDSNDKFYQAWTAPEFKEALIGLNKWYKDGIIDQEAFTRKQNTARQTLWAKENTGGMTHEFFASTSAFNYNTEVLAAVPDFKLEAFLPVNKNGAGFEEHQRAIAKQDGWAISASTKNAEAAIRYMDWFYSEEGRRAINFGIEGESYTMVNGVPTFTEDVLKQGNVNTYLQSAYGAQLPIGYKQNYDYEDQWVTKEGRDANELYSANKASVYTVPTTPVLSFTEEETAMYDQCLTAINEYQNEMVTAFITGKTDIESNWDAYIAKCKELGVDTLVELYETAYARYKAIK
SIO_010081: CPHY_RS02675
subclass of: SO_0000673
so part of: CPHY_RS02675
location: 615427..617103
location: region:615427-617103:1
so has part: feature:615427-617103:1:exon

WP_012198518.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:615427-617103:1:exon

CPHY_RS02680
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02680
old locus tag: Cphy_0488
so part of: sequence
location: 617267..619552
location: region:617267-619552:1
so has part: feature:617267-619552:1:exon
subclass of: SO_0000010

position:617267:1
position: 617267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:619552:1
position: 619552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:617267-619552:1:exon

CPHY_RS02680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02680
old locus tag: Cphy_0488
inference: COORDINATES: protein motif:HMM:NF027656.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4962 domain-containing protein
translation: MTKLIEPKSSILTIGYHPENEKILENPPRFTWMPESEKDILYRIQVSKNDTFDPDSTLTIHHIPYNFYTLDKELEPGDYYWRYTIDQEECSYSKVRKLSISDGLVVTPLVSREKRYDNVDMSHPRIWLNKEKIDMFREELEKNPNYCGFQIFLERSVLIHVNSEFVAEPPFYPGNIRVVELWRKNYQECQRGLEYIRSLSVAGVLLENSEYIEKAKLALLKLASWDTNGSTARDYNDECSFRVAYALAFGYDWLYSFLTKQERSIILESLSVRTRQVATHIIKDSRIHLSLYDSHAVRSLSSVLTPCCIAMLGESAEAKEWLDYTIEYFNTIYTPWGGEDGGWAEGGLYWTTGMAFVSEALNTIKSFLNIDIYKRPFFQKTGDFPLYCMPVDTYRASFCDQSNLGKYPGHKTAYNIRQFAGVTGNQNYQWYYEQVLEREKEIDQDFFNKGWWDFYFDDMVYRHDYKDTTLKEEKLERVKWFKDIGWVAINKDMKDPKEHIFLLTKSSPYGSVSHSHGDQNSFVLFAYGEPLIIKSGYYIGFNTTMHRNFRRQTLSHNSILINGKGQYAGMDKAKQLSAKGHICEVKESDNLVYIKEDATAAYQLTAPELTKYTREIYFVDDSYFILVDTVESEDKSDVEWLLHSLSKFQIEEETIEVNGKMAGMTAKIVYCSSNIESITQSDIFTEVDEKETDGLDNQWHLTMKTGKAKKHIIVSVIVPYKMEQKKLVNSVRDDQGMDIYLYFSYEGKTFSLCIDGTKRNE
SIO_010081: CPHY_RS02680
subclass of: SO_0000673
so part of: CPHY_RS02680
location: 617267..619552
location: region:617267-619552:1
so has part: feature:617267-619552:1:exon

WP_012198519.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:617267-619552:1:exon

CPHY_RS02685
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02685
old locus tag: Cphy_0489
so part of: sequence
location: 619572..621440
location: region:619572-621440:1
so has part: feature:619572-621440:1:exon
subclass of: SO_0000010

position:619572:1
position: 619572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:621440:1
position: 621440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:619572-621440:1:exon

CPHY_RS02685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02685
old locus tag: Cphy_0489
inference: COORDINATES: protein motif:HMM:NF019552.2
GO function: GO:0016829 - lyase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heparinase II/III family protein
translation: MYFEYQNYLKNNENYHDMLTAMKQETEYFMERFKDDPRFLSGWGHGYFCNEDGGRLIYDINKPYEHKCSICGKVYSEFIYDSYFITMFRNDAVVTAMKAALLYAVYAEEKYLTFVKTIVGFYADNYEHFAVHAKEKINCNLNEDVGGAGKIMPQGLNEAIVAIRFIIALELVKDSLDTTWIQEVNEKLFAPMVKLLLPQKMHIHNIPVWINSAIGSMGLFFQEEEWVKEATKNPYHVYEQIRKGVTDSGFWYEGSIHYNFFALEGLMSFLVFAKAYHLEIPADINETVFHMLEAAYEYAFDNDLFPNPSDGWPNISLKTYSYIYFMGYKVFGEKVLPFIKHIENTPGERGKLPLSEPYYYKNKISLERILFGPDIMELKAEEIKSRGSKNFSGSNCAILRNNEFNVFLKYGHQTKSHAHPDKMNIEIMVGGKVLTKDLSNSGYASKLCNGWHRTIAAHNTCVVNGMSTDITKSGEVTQFSDNLIEAKAMAYEGVMYTRKFELRDETLLDSFLVSCEKSSVIDWFFHFETPIETEQLKLKEVNLFTEYPYVTKVSEIETEEKTLILKNDLVTMQLILEEGVKVYFTKTYNNPANTMRDTIILRKEGKEARFQNVITKLKNGLN
SIO_010081: CPHY_RS02685
subclass of: SO_0000673
so part of: CPHY_RS02685
location: 619572..621440
location: region:619572-621440:1
so has part: feature:619572-621440:1:exon

WP_012198520.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:619572-621440:1:exon

CPHY_RS02690
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02690
old locus tag: Cphy_0490
so part of: sequence
location: 621481..622278
location: region:621481-622278:1
so has part: feature:621481-622278:1:exon
subclass of: SO_0000010

position:621481:1
position: 621481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:622278:1
position: 622278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:621481-622278:1:exon

CPHY_RS02690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02690
old locus tag: Cphy_0490
EC number: 1.1.1.69
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013273502.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: gluconate 5-dehydrogenase
translation: MSTSFSLEGKIALVTGACYGIGFAIASGFAKAGATIVFNDIKQESVDKGLLAYQEAGIKAYGYVCDVTKEEQVTEMVAKIEKEVGVIDILVNNAGIIKRIPMCEMSAEEFRQVVDVDLNAPFIVAKAVIPGMIKKGNGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEFNIQCNGLGPGYIATPQTAPLREVSADGKRHPFDQFILAKTPAARWGEAEDLVGPAVFLASEASNFVNGHILYVDGGILAYIGKQPE
SIO_010081: CPHY_RS02690
subclass of: SO_0000673
so part of: CPHY_RS02690
location: 621481..622278
location: region:621481-622278:1
so has part: feature:621481-622278:1:exon

WP_012198521.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:621481-622278:1:exon

CPHY_RS02695
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02695
old locus tag: Cphy_0491
so part of: sequence
location: 622395..623030
location: region:622395-623030:1
so has part: feature:622395-623030:1:exon
subclass of: SO_0000010

position:622395:1
position: 622395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:623030:1
position: 623030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:622395-623030:1:exon

CPHY_RS02695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02695
old locus tag: Cphy_0491
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198522.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RpiB/LacA/LacB family sugar-phosphate isomerase
translation: MKIALINENSQAAKNEMIAKALTDVVTPMGHEVFNYGMYGAEDKAPLTYVQNGILAAILLNSGAADYVITGCGTGEGAMLACNSFPGVLCGHVVDPSDAYMFAQINDGNAIALPFAKGFGWGAELNLTYIFEKLFQGESGQGYPKDRVIPEQRNKKILDEVKKVTHVDMITILKNIDQELLKGAIAGEKFGEFFYANCKDDEIKAFIKSIL
SIO_010081: CPHY_RS02695
subclass of: SO_0000673
so part of: CPHY_RS02695
location: 622395..623030
location: region:622395-623030:1
so has part: feature:622395-623030:1:exon

WP_012198522.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:622395-623030:1:exon

CPHY_RS20520
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS20520
old locus tag: Cphy_0492
so part of: sequence
location: 623046..627716
location: region:623046-627716:1
so has part: feature:623046-627716:1:exon
subclass of: SO_0000010

position:623046:1
position: 623046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:627716:1
position: 627716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623046-627716:1:exon

CPHY_RS20520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS20520
old locus tag: Cphy_0492
inference: COORDINATES: protein motif:HMM:NF020367.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polysaccharide lyase family 7 protein
translation: MGCRHSKLRRITALIVLIAIVITGMPNTVHAQDKTYIMYQIKDGDTIKKIADRYNTSIDSIMKLNNIKNSNVFYSGKETKVPIASVTYVVKKGDTLSKIARTHGTTVDTIAKLNGIKDENKIQTGQKLIVVKEEHVESTTSVNNEETLVRTQKELLNALASKSSTVIRIATEKKITFEIPKKNYNAKVLIVDAKNSEVKNEGTFHHILIQAIKTSTFYEYGSKNTIIIKASTAHLVMEKTAVPGKIIVEDTNKELTIDNYTKKQMTLQTSDTVLTVKAENSVEVKQGIVKKESKLNQIKPTVAPTTKPTAVPTTKPTVVPTITPTGTPNPTTAMPEPTSIPTDIPTPVPTTIPPTNVPTISPTPIPQLPSDIVDFSTWKLQLPIAGESGLSVKEVGPEDLNNGFVHDEYFYVDTDGGIVFHCPVDGFKTANTNYARTELREIIDGKNPAVNWGFQGTHILRTSESVEKVSSNGRTVVSQIHGIYPNGDNGPVLVKVQYEHDLKAVVVMLKTGTAPNAAEQRGYFYGVELGQRFETEIKCVEGVLYVTIQSEGRKETYTINFMEMDPTWGGQLGYFKVGNYIQDSDVNYENEAATVKVYSIETFHDDSYVEQVPIEGLAMKQTEVTLDVGETIGLEPVFTPVDTTNKAVTWNVVSGQNKVAVNKHGVVTAIAEGEAIVRATSKENNSVFAECVLTVTLDSKQEVIALYEQDFGKDMPYDIANASEWLLSTTGYGKVEVEQEGDNFILKLTDTDMAGTAKSLVYFPEQYGTTTLSYRIRVDEILVKDPEGAKAQASYLYLPVGGQDGFMNAADEMFRIRNGATYQGGTLINHRWQLSHSYSDATMNYAATEFKIGEWKEITVVITPDNGTANANKTDVYVDGYRVASQMNNNKINSYINQAEFYTGTKDQVSFSIDDVRIYSGEKVREAEDALPPTSITLGTAPSTMATGDSFKLTTYITPADAKEAVTYLITSGADLVSVSKDGLVTAIKPGTATVRVHSTGHEEIFSEITLTIVEESSIVRVESIELPEKIINLAEGEEKQLFPILLPLNATEQKVSYEVIHGFDVISVSAEGILSTKNTGVATVRITCMDNSRLYVDCDISVTRKTNEGTVIFRDTFDETLDLTKWTLATSNFNDTITEVKDGSLHLVDNNTSGQPRAYVSFEPQASTFSIEFKVKMSADTIYNSNKVSALCVAFGTGTITSTASETFRFKTSADVANGEVTNRRFVYSKEEGASGFYDLSKNYELEEWYTVKLVTTPNDGSTRANTTDIYINDTLMIEGAANKTNAAIIDKLIFQTGTADLTEFWIDDVTITAGNSSSETPGENPGYQLVYEEDFENGSLPEASSTTNPSIRPSWKLTTGESSLSEIALDTIDNSALKLFDSDTSSQPKAQLIFNPITDKATIEFRLKMESDKVYIDGTNQKASAFCVVFGSTSDGNIATKANEMFRFKTTATVDTASGSAISYRKYQYENSDGKSFVTLDAPSYELNTYYTIKFVITLGDTQKTEIYIDGVKVAEGYHKKNTNTVDTILFQSGSMDLTNYWIDNVKIYQGHNV
SIO_010081: CPHY_RS20520
subclass of: SO_0000673
so part of: CPHY_RS20520
location: 623046..627716
location: region:623046-627716:1
so has part: feature:623046-627716:1:exon

WP_012198523.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:623046-627716:1:exon

CPHY_RS02710
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02710
old locus tag: Cphy_0493
so part of: sequence
location: 627933..630125
location: region:627933-630125:1
so has part: feature:627933-630125:1:exon
subclass of: SO_0000010

position:627933:1
position: 627933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:630125:1
position: 630125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:627933-630125:1:exon

CPHY_RS02710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02710
old locus tag: Cphy_0493
inference: COORDINATES: protein motif:HMM:NF012245.2
GO process: GO:0006935 - chemotaxis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyl-accepting chemotaxis protein
translation: MGVHMKKKRMQKVKKESKENTWGKSTEDSKSDNRKENTKVENTKKERTKKEKTKFTIFWKICLGYLVPIFFILLLGIISYQKASEGLIHNYEEATSQTIRMTSNYLGLITDTVEAVAIEYINDKDLNNYVNGGKYDVTKFVEFMDKTTRKLSNVVTSNEYIMNAHIIPRESYNLFTSSKNGNKGFYSSLEGQGELAMFQDDAVNDAWIGSHPEIDRELGLNGNSYFMSYVRSIRSFSQRNAVVVIDVSYEALHKQLSQLSFGENSIVGLVTRDGRELALDEHGDIISDVVFAGNVDVDILSDGDKERDTYVKYDGQDYFLMQQRVSDTNAFLCALVPKALIMRQALEIKNIVLIIVSLACIAAIVVGIMISKGISQGVTKLNRKLQQIAEGDLTTRIDLKRRDEISEVAHNTEKMVDSVRLLIKKVNEVCGRVLISSDQVISTSNSISSSTDKIAGAIHEIDIGISEQAVDSQNCLVQVDDLSNSILLINQHVNGTEILVSKTRESIHRSLEKMNLLTEKSTKTSGITENVVNNINELSRQSTTIDSIVSVIDEIAEQTNLLSLNASIEAARAGEAGKGFGVVSEEIKKLALRSKELAGQIKSIVSNIHKQTSETVTITKQAKVMVSEEANLMKQTIDSFVEMEDGMNVLLDIMMKISTDIENMNTMRTVTLEAIENISAVSEQTCAASGTVNDTMQMQVKKVVDLQEVAKELKMNVNDLEESITKFKID
SIO_010081: CPHY_RS02710
subclass of: SO_0000673
so part of: CPHY_RS02710
location: 627933..630125
location: region:627933-630125:1
so has part: feature:627933-630125:1:exon

WP_041703123.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:627933-630125:1:exon

CPHY_RS02715
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02715
old locus tag: Cphy_0494
so part of: sequence
location: 630357..631754
location: region:630357-631754:1
so has part: feature:630357-631754:1:exon
subclass of: SO_0000010

position:630357:1
position: 630357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631754:1
position: 631754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:630357-631754:1:exon

CPHY_RS02715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02715
old locus tag: Cphy_0494
inference: COORDINATES: protein motif:HMM:NF024808.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: extracellular solute-binding protein
translation: MKFIKNSVLSILFVVVMLIGLTGCDNLKRNSASSLESKVEEKKKKIVTVWTKDRHDAEFQLEKIEEYNASNSDNIEIRYSIFSDNYLQAVDLAFQSNSAPDILVFTSQVFNNYVVSDQFADLTPFMDKEFKETFSSSMIEGLNVIDGKCYYIPTAATICRLFYNKDIFERVGVLEPPRTLDEMVEIAQKITKELSGEGIYGFSANMKYPNSALNRSLMPMAQMGLGIRSGFDFKKGVYDFSGYQTILEEWRTLLSPECAYPNSDSLDIDPLRKLFAAGKIGMYMSYAHSELGVYENQFPMEQEWRCTEIPVVGGIILGAQNYSLNNGYLFNAKSKNLDAAWKAYVSVFADIDNLAEYHSQGLGISTVPKVLERATLNQSYIDNPALLVGENDKIWPKVPHEANVNAIVVDGLDMYNTFAELIYGTMDIKEGLSDLTKRYNKAYQEGINSGIGEVYKIDDFDPLNP
SIO_010081: CPHY_RS02715
subclass of: SO_0000673
so part of: CPHY_RS02715
location: 630357..631754
location: region:630357-631754:1
so has part: feature:630357-631754:1:exon

WP_012198525.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:630357-631754:1:exon

CPHY_RS20525
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS20525
old locus tag: Cphy_0495
so part of: sequence
location: 631901..633715
location: region:631901-633715:1
so has part: feature:631901-633715:1:exon
subclass of: SO_0000010

position:631901:1
position: 631901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:633715:1
position: 633715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:631901-633715:1:exon

CPHY_RS20525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS20525
old locus tag: Cphy_0495
EC number: 2.7.13.3
inference: COORDINATES: protein motif:HMM:NF014567.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sensor histidine kinase
translation: MKRFIKNTKFKTKIILLFLTLLLLHSTIAGTLYYKYTYKDTLSNYYQSSEDTIYQLNVHMYSRFRSIAKSVNALSNNMSFANPMSVFLRNPDTLNYAKLMGDVADSITEMQMSDDYIHSIYIYTKYGDFDNFVRIKKHGIKFEETEVYQYFEEHPDETVAWFPAMENPVFIGTDIVIPIVYKFAIGRENIFILINLDQSKISDYLNETYNSYEKIFIVDKNGKNIINLDDKYKEIPLIRHQGDDLDEMALCQPLKIGEDDYLVTSTMMKGNSWEIYALKSTESLLGNLTSLRKFISLELSISALLALFIIILCVRSLTAPLGRLVNIMDKTIKEGFHIKFHYPYKDEVGNLAKSFNYMVEEIEGLVTELNLHIEALKEEKEALKVVQEQKRIAEIKALQAQINPHFLYNTLNTITWQAADQGAKEISILSKSLGSFFRIALSKGREIITIREELEHVKSYLEIQKIRYKSKINYSIEIDDEIKDCSIIKILLQPLVENAIYHGIKTKEGHGNISIAAVMKMDELTIPAIKLCVEDDGLGIEKNQLEILNAGLSKGIVDSKNGYGIYNVNQRLKLTYGEIYGLSLESKLGEWTRATIIIPVQKLD
SIO_010081: CPHY_RS20525
subclass of: SO_0000673
so part of: CPHY_RS20525
location: 631901..633715
location: region:631901-633715:1
so has part: feature:631901-633715:1:exon

WP_012198526.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:631901-633715:1:exon

CPHY_RS02725
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02725
old locus tag: Cphy_0496
so part of: sequence
location: 633810..635441
location: region:633810-635441:1
so has part: feature:633810-635441:1:exon
subclass of: SO_0000010

position:633810:1
position: 633810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:635441:1
position: 635441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:633810-635441:1:exon

CPHY_RS02725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02725
old locus tag: Cphy_0496
inference: COORDINATES: protein motif:HMM:NF012301.2
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator
translation: MYQIIIADDEEDVREILARNINQSGKEFQVIGTAENGVDALRLVKELNPSIVITDICMPVLGGLELIKSIQDFDPSIKTVVISGHDEFSYAKKAMALGVTEYLLKPFLPEELFEVLYKIKDNLDHQIALTKNITKMQNQIEKNLIYSQERFLKKVIEGSYQESEIILEGENVQIDLTAKVYCTGIFKVSVNTGHHAKELNGDRVIADFFSIIKEQYFDPEIKIYAISFEENQIVLIFCGACRNHLLFFKHIEQGIEKINESMERYYHTKVNGVLGNAYESIEKISISYQEALSAWKRVLDFKVNIVRYDEGKKRNDTEEIGIRQKPKELELSLLLHIQMNRREKALEALQEIFVSYASYGIEYMEFVNVSLVELVFRISESLAKAGGNLGVWEDDKVIHYLKRHFTYGSLMEAKSVLEDYIIRCCEEFSIINEKQSEKIVYNVKMLIENNLSNEEFNIEEASAQLFFSHNYVRQVFKQKTGESFNDYLFRRRMEVALELLKNPSQKIREIALSIGYSNQRYFASCFKKYYNCTPTEYREKLGI
SIO_010081: CPHY_RS02725
subclass of: SO_0000673
so part of: CPHY_RS02725
location: 633810..635441
location: region:633810-635441:1
so has part: feature:633810-635441:1:exon

WP_012198527.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:633810-635441:1:exon

CPHY_RS02730
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02730
old locus tag: Cphy_0497
so part of: sequence
location: complement(635568..638291)
location: region:635568-638291:-1
so has part: feature:635568-638291:-1:exon
subclass of: SO_0000010

position:635568:-1
position: 635568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638291:-1
position: 638291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:635568-638291:-1:exon

CPHY_RS02730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02730
old locus tag: Cphy_0497
EC number: 2.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198529.1
GO function: GO:0016757 - glycosyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transglycosylase domain-containing protein
translation: MDFSRKGVIKKQRNIKSTSKRLNTKIRITLFRVSMISIVCLGIVGVIAISGAMKGIIGSAPDIGQVNIDPEGFASYIYYSDGTLAQKLIGAESNRVLVSIDKIPDVLQHAFVALEDERFYEHDGIDVYGIFRAGFSVLKTKDLGFGGSTITQQLIKAKVFNYGNEPNAVDKIVRKIQEQYLAIKLEDIYTKDEILEAYLNNINLGNGTYGVQTAAQSYFGKDVSELTLSEASVIAPIALSPVFRNPINYPAMNAERRQSCLDNMLRLGYITQKDYDAALADDVYSRIKQYNEEKAPSTYYSYFTDAVINQVLSDLQTKKGYTQDDASYMLFSNGLKIFSTQDKTIQGIVDKYFQDESNFPAIGEGSYYEMKYELSVYDDEDNATHYHFNDMLEYFKDFKDTEGLYFHEPYTPKVGINSLGYSKEDMEAKIEEFRNSKVKENQVYVEKKEITLQPQTSMTIMDQHNGNVVALYGGRGTKTGNRTTNRASSSKRQVGSTFKVLASFLPALDSGRYTLASVMDDSEYTYPNGKDTVTNWNKKYKGLSTMREGIYNSMNIIACRFMEAVTPRKGFDYLTSLGFDLVELKVKNGKTYTDIGVSLALGGITDGVTNVELTAGYAAIANGGVYNEPIYYTKVVDQNGKVILSNEPSSKQVMYTSTAWLLTNAMEDTIKRGTATSIGFRNYSMPIAGKTGTSTKDYDLWFVGYTPYYTSAIWTGFDYNFPQKEKSYHKVMWRNIMEEIHSTLKLENKAFVKPDSIVTARICTKSGQLAVPGLCDKALSGDCTRTEYFAKGTVPTQTCTVHQKVSICKVSGYFASPYCPLDSLVEKVFLIKDEKGSTDDKPYLLPTGDITNPCPIHSEGTVAPPTDEEDNETPIEPENPDDGNENPVEPTTTPPPVIIIPPTDNQP
SIO_010081: CPHY_RS02730
subclass of: SO_0000673
so part of: CPHY_RS02730
location: complement(635568..638291)
location: region:635568-638291:-1
so has part: feature:635568-638291:-1:exon

WP_012198528.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:635568-638291:-1:exon

CPHY_RS02735
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02735
old locus tag: Cphy_0498
so part of: sequence
location: complement(638612..641344)
location: region:638612-641344:-1
so has part: feature:638612-641344:-1:exon
subclass of: SO_0000010

position:638612:-1
position: 638612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:641344:-1
position: 641344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:638612-641344:-1:exon

CPHY_RS02735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02735
old locus tag: Cphy_0498
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012198528.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transglycosylase domain-containing protein
translation: MDFSRKGVVKKQRDIKSTSKRLNTKIRITLFRVSMICIVCLGIVGVIAVSGAVKGVIESAPDIGQVNIDPEGFASYIYYNDGTLAQELIGAESNRILVSIDEIPDVLKHSFVALEDERFYQHDGIDVYGIFRAGFSVLKTQGLGFGGSTLTQQLIKIKVFNYGNEANAVDKIVRKIQEQYLAIKLEDIYTKDEILEAYLNNINLGNGAYGVQTAAQSYFGKDVSELTLSEASVIAPIALSPVRCNPINYPETNAKRRESCLDNMLRLGYISQKEHDDALADDVYSRIKQYNEEKAPSTYYSYFTDAVIDQVLSDLQTKKGYTQDDASYMLYSGGLKIYTTQDKTIQGIVDKYFQDEKNFPAVGEGSYYEMKYDLSVYDDEDKVTHYHFNDLLEYFKDFKDTQSLYYHDPYSSKVGINSLGYSKEDMEAKIEEFRNSKVKGDQVYVENKQITLQPQTSMTIMDQHNGDVVALYGGRGNKTGNRTTNRASSSKRQVGSTFKVLASFLPALDSGRYTLASVMDDSEYTYPNSTDTVTNWNKKYKGLSTMREAIYNSMNIIACRFMEAVTPRKGFDYLTSLGFKLIELKVMDNGKTYSDIGVPLALGGITEGVTNVELTAGYAAIANGGVYNEPIYYTKVVDQNGKVILSNEPSSKQVMYTSTAWLLTNAMEDTIKRGTATSIGFRNYSMPIAGKTGTSTKDYDLWFVGYTPYYTSAIWTGFDYNFPQKEKSYHKVMWRNIMEEIHSTLKLENKAFAKPDSIVSARICAKSGQLAIPGVCDKALGGDTTRVEYFAKGTVPTQTCTVHQKVSICKVSGHFASPYCPLDSLVEKVFLIKDEKSQTDDTPYILPTGDMTTPCPIHSEGTVAPPTDGEDNETPIGPENPDEGNKIPVGPTTTPTPPPVIIIPPTDNQP
SIO_010081: CPHY_RS02735
subclass of: SO_0000673
so part of: CPHY_RS02735
location: complement(638612..641344)
location: region:638612-641344:-1
so has part: feature:638612-641344:-1:exon

WP_012198529.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:638612-641344:-1:exon

CPHY_RS02740
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02740
old locus tag: Cphy_0499
so part of: sequence
location: complement(641556..642212)
location: region:641556-642212:-1
so has part: feature:641556-642212:-1:exon
subclass of: SO_0000010

position:641556:-1
position: 641556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:642212:-1
position: 642212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:641556-642212:-1:exon

CPHY_RS02740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02740
old locus tag: Cphy_0499
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019160852.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YigZ family protein
translation: MQTSYKTVYAGGTSEIIEKKSRFIATVIPIKSEEEALSFIEQMKKKNWDASHNCSAYVLGLNQELQRCSDDGEPSKTAGRPMLDILLGEGIHNTAVVVTRYFGGTLLGTGGLVRAYQSAAKEGLANSIIIEKHFGKQYEITTDYNGIGKLQYIAGTMNLTILSTDYTDIVKATLLIPPDAFGSFQKKITEATNGRAVMEELADVYYAFLDQEILIENA
SIO_010081: CPHY_RS02740
subclass of: SO_0000673
so part of: CPHY_RS02740
location: complement(641556..642212)
location: region:641556-642212:-1
so has part: feature:641556-642212:-1:exon

WP_012198530.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:641556-642212:-1:exon

CPHY_RS02745
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02745
old locus tag: Cphy_0500
so part of: sequence
location: 642483..643010
location: region:642483-643010:1
so has part: feature:642483-643010:1:exon
subclass of: SO_0000010

position:642483:1
position: 642483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:643010:1
position: 643010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:642483-643010:1:exon

CPHY_RS02745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02745
old locus tag: Cphy_0500
inference: COORDINATES: protein motif:HMM:NF016763.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VanZ family protein
translation: MKLLMNENTSKKQRLMAAVPMLLMMVLIFLFSAKTATESDGTSLPIAKGLLNTYQSLFGKMGKDSYDVSLRVANVLTRKAAHVTEYGILSILVSYYIWVRGHRGKQFFFLTILISVGYAITDEIHQLFVPGRAGRITDVLIDSSGCIMGALFFLLIYHLIKNRSLKKQLSRQLIK
SIO_010081: CPHY_RS02745
subclass of: SO_0000673
so part of: CPHY_RS02745
location: 642483..643010
location: region:642483-643010:1
so has part: feature:642483-643010:1:exon

WP_012198531.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:642483-643010:1:exon

CPHY_RS02750
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02750
old locus tag: Cphy_0501
so part of: sequence
location: complement(643059..643232)
location: region:643059-643232:-1
so has part: feature:643059-643232:-1:exon
subclass of: SO_0000010

position:643059:-1
position: 643059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:643232:-1
position: 643232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:643059-643232:-1:exon

CPHY_RS02750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02750
old locus tag: Cphy_0501
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005950268.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4250 domain-containing protein
translation: MLPTDPIMLLSYVNTKLRDEFQSLEDFCQSLDVNVVTLIDTLDKIDYHYSKERNQFI
SIO_010081: CPHY_RS02750
subclass of: SO_0000673
so part of: CPHY_RS02750
location: complement(643059..643232)
location: region:643059-643232:-1
so has part: feature:643059-643232:-1:exon

WP_012198532.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:643059-643232:-1:exon

CPHY_RS02755
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02755
old locus tag: Cphy_0502
so part of: sequence
location: 643428..644762
location: region:643428-644762:1
so has part: feature:643428-644762:1:exon
subclass of: SO_0000010

position:643428:1
position: 643428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:644762:1
position: 644762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:643428-644762:1:exon

CPHY_RS02755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02755
old locus tag: Cphy_0502
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014080482.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication-associated recombination protein A
translation: MDLFEYMRENTKEKESPLASRLRPTKLTEVVGQSHIIGEDKLLYRAIMADKLGSVIFYGPPGTGKTTLAKVIANTTSSNFQQINATSAGKKDMEAVIEQAKQTLGMYGKKTILFVDEIHRFNKGQQDYLLPFVEDGTIVLVGATTENPYFEVNSALISRSIVFELKPLEQNDIKELLIRAITDKEKGLGAYHAVMEDDALDFLANAANGDARSALNAIELGVLTTKRSEDGFIHITLEVASECIQKRVLKYDKSGDNHYDTISAFIKSMRGSDPDAAIYYLAKMLYAGEDVAFIARRIMICAAEDVSNADPNALVVATAAAQAVERLGMPEGRIVLAQAVTYVACAPKSNSAIVAIDEASELVAKDKTPPIPPHLQDAHYKGAAKLNHGVGYLYAHNYENHYVKQQYLPDPYVGRTFYRPSDNGYEKAIKEYFRKIKGNETDSF
SIO_010081: CPHY_RS02755
subclass of: SO_0000673
so part of: CPHY_RS02755
location: 643428..644762
location: region:643428-644762:1
so has part: feature:643428-644762:1:exon

WP_012198533.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:643428-644762:1:exon

CPHY_RS02760
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02760
old locus tag: Cphy_0503
so part of: sequence
location: 644853..645194
location: region:644853-645194:1
so has part: feature:644853-645194:1:exon
subclass of: SO_0000010

position:644853:1
position: 644853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:645194:1
position: 645194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:644853-645194:1:exon

CPHY_RS02760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS02760
old locus tag: Cphy_0503
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTSKENNTSGTDNTNSTGNTSKAKRVLSMIGIIILLGLYLFSLVAAIMAKPYANGLFLTSIYATVIIPVFIYVFLLMNRTFGKKNDGYTMHEINKMKKKGFQEANKTDKEDN
SIO_010081: CPHY_RS02760
subclass of: SO_0000673
so part of: CPHY_RS02760
location: 644853..645194
location: region:644853-645194:1
so has part: feature:644853-645194:1:exon

WP_012198534.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:644853-645194:1:exon

CPHY_RS21900
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS21900
so part of: sequence
location: complement(645394..645552)
location: region:645394-645552:-1
so has part: feature:645394-645552:-1:exon
subclass of: SO_0000010

position:645394:-1
position: 645394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:645552:-1
position: 645552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:645394-645552:-1:exon

CPHY_RS21900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 357809
locus tag: CPHY_RS21900
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013273496.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSYIAPKMQAKFETLSIDLKNCILEREVTINNTQDLIRILEEIVEESDENIK
SIO_010081: CPHY_RS21900
subclass of: SO_0000673
so part of: CPHY_RS21900
location: complement(645394..645552)
location: region:645394-645552:-1
so has part: feature:645394-645552:-1:exon

WP_041703126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:645394-645552:-1:exon

CPHY_RS02770
type: Gene
subclass of: SO_0000704
RO_0002162: 357809
locus tag: CPHY_RS02770
old locus tag: Cphy_0504
so part of: sequence
location: 645905..646405
location: region:645905-646405:1
so has part: feature:645905-646405:1:exon
subclass of: SO_0000010

position:645905:1
position: 645905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition