Mastomys coucha isolate ucsf_1 chromosome Y, UCSF_Mcou_1, whole genome shotgun sequence.
type: Entry
definition: Mastomys coucha isolate ucsf_1 chromosome Y, UCSF_Mcou_1, whole genome shotgun sequence.
sequence version: NC_045031.1
sequence date: 2019-10-21
sequence: sequence
division: CON
label: NC_045031.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA578167
dblink: SAMN07635206
keyword: WGS
keyword: RefSeq
source: Mastomys coucha (southern multimammate mouse)
organism: Mastomys coucha
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mastomys.
reference: 1
references: 31424545
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM018030.1.\nAssembly name: UCSF_Mcou_1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the University of California, San\nFrancisco on 2019/09/24. The original whole-genome shotgun project\nhas the accession VSBT00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: University of California, San\n Francisco\nAssembly Date :: 25-SEP-2017\nAssembly Method :: Meraculous v. 2.0.5; Ragout v. 2.0\nAssembly Name :: UCSF_Mcou_1\nGenome Representation :: Full\nExpected Final Version :: Yes\nReference-guided Assembly :: GCA_000001635.2; GCA_000001895.4\nGenome Coverage :: 73.0x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Mastomys coucha Annotation Release\n 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 508531
topology: linear
so has quality: SO_0000987
location: 1..508531
location: region:1-508531:1
RO_0002162: 35658

NC_045031
type: RefSeq
SIO_000068: refseq

PRJNA578167
type: BioProject
SIO_000068: bioproject

SAMN07635206
type: BioSample
SIO_000068: biosample

1
title: Comparative genomic characterization of the multimammate mouse Mastomys coucha
author: Hardin, A.
author: Nevonen, K.A.
author: Eckalbar, W.L.
author: Carbone, L.
author: Ahituv, N.
journal: Mol. Biol. Evol. (2019)
pubmed: 31424545

31424545
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508531:1
position: 508531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-508531:1:source
so part of: sequence
organism: Mastomys coucha
mol type: genomic DNA
isolate: ucsf_1
chromosome: Y
sex: male
tissue type: liver
dev stage: adult

35658
type: Taxonomy
SIO_000068: taxonomy

LOC116096496
type: Gene
subclass of: SO_0000704
RO_0002162: 35658
gene: LOC116096496
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2315..20389
location: region:2315-20389:1
so has part: feature:2315-20389:1:exon
subclass of: SO_0000010

116096496
type: Gene
SIO_000068: ncbigene

position:2315:1
position: 2315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20389:1
position: 20389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2315-20389:1:exon

LOC116096496
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35658
gene: LOC116096496
product: eukaryotic translation initiation factor 2 subunit 3, Y-linked
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031378349.1
SIO_010081: LOC116096496
subclass of: SO_0000673
so part of: LOC116096496
location: join(2315..2421,3007..3070,3577..3704,3791..3912,4901..4995,5808..5966,7424..7558,7687..7781,8450..8594,11104..11273,15099..15271,19989..20389)
location: region:2315-20389:1
so has part: feature:2315-2421:1:exon
so has part: feature:3007-3070:1:exon
so has part: feature:3577-3704:1:exon
so has part: feature:3791-3912:1:exon
so has part: feature:4901-4995:1:exon
so has part: feature:5808-5966:1:exon
so has part: feature:7424-7558:1:exon
so has part: feature:7687-7781:1:exon
so has part: feature:8450-8594:1:exon
so has part: feature:11104-11273:1:exon
so has part: feature:15099-15271:1:exon
so has part: feature:19989-20389:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2315-2421:1:exon

position:2421:1
position: 2421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3007-3070:1:exon

position:3007:1
position: 3007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3070:1
position: 3070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3577-3704:1:exon

position:3577:1
position: 3577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3704:1
position: 3704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3791-3912:1:exon

position:3791:1
position: 3791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3912:1
position: 3912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4901-4995:1:exon

position:4901:1
position: 4901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4995:1
position: 4995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5808-5966:1:exon

position:5808:1
position: 5808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5966:1
position: 5966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7424-7558:1:exon

position:7424:1
position: 7424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7558:1
position: 7558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7687-7781:1:exon

position:7687:1
position: 7687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7781:1
position: 7781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8450-8594:1:exon

position:8450:1
position: 8450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8594:1
position: 8594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:11104-11273:1:exon

position:11104:1
position: 11104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11273:1
position: 11273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:15099-15271:1:exon

position:15099:1
position: 15099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15271:1
position: 15271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:19989-20389:1:exon

position:19989:1
position: 19989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116096496
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35658
gene: LOC116096496
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 2 subunit 3, Y-linked
translation: MAGGEARVTLGQPHLSRQDLTTLDVTKLTPLSHEIISRQATINIGTIGHVAHGKSTVVKAISGVHTVRFKNELERNITIKLGYANAKIYKLDDSSCPRPECYRSCGSSTPDEFPSDIPGTKGNFRLVRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNESCPQPQTSEHLAAIEIMKLKHILILQNKIDLVKESQAKEQYEQILAFVQGTVAEGAPIIPISAQLKYNIEVVCEYIVKKIPVPLRDFTSEPRLIVIRSFDVNKPGCEVDDLKGGVAGGSILKGVLKVGQEIEVRPGIVSKDGEGKLMCKPIFSKIVSLFAEHNDLQYAAPGGLIGVGTKIDPTLCRADRMVGQVLGAVGALPEIFTELEISYFLLRRLLGVRTEGDKKAAKVQKLSKNEVLMVNIGSLSTGGRVSAVKADLGKIVLTNPVCTEVGEKIALSRRVEKHWRLIGWGQIRRGVTIKPTIDDE
SIO_010081: LOC116096496
subclass of: SO_0000673
so part of: LOC116096496
location: join(2353..2421,3007..3070,3577..3704,3791..3912,4901..4995,5808..5966,7424..7558,7687..7781,8450..8594,11104..11273,15099..15271,19989..20052)
location: region:2353-20052:1
so has part: feature:2353-2421:1:exon
so has part: feature:3007-3070:1:exon
so has part: feature:3577-3704:1:exon
so has part: feature:3791-3912:1:exon
so has part: feature:4901-4995:1:exon
so has part: feature:5808-5966:1:exon
so has part: feature:7424-7558:1:exon
so has part: feature:7687-7781:1:exon
so has part: feature:8450-8594:1:exon
so has part: feature:11104-11273:1:exon
so has part: feature:15099-15271:1:exon
so has part: feature:19989-20052:1:exon

XP_031234209.1
type: Protein
SIO_000068: ncbiprotein

position:2353:1
position: 2353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20052:1
position: 20052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2353-2421:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3007-3070:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3577-3704:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3791-3912:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4901-4995:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5808-5966:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7424-7558:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7687-7781:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8450-8594:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11104-11273:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:15099-15271:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:19989-20052:1:exon

LOC116096483
type: Gene
subclass of: SO_0000704
RO_0002162: 35658
gene: LOC116096483
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(75441..87941)
location: region:75441-87941:-1
so has part: feature:75441-87941:-1:exon
subclass of: SO_0000010

116096483
type: Gene
SIO_000068: ncbigene

position:75441:-1
position: 75441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87941:-1
position: 87941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75441-87941:-1:exon

LOC116096483
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35658
gene: LOC116096483
product: testis-specific Y-encoded protein 1-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031378322.1
SIO_010081: LOC116096483
subclass of: SO_0000673
so part of: LOC116096483
location: complement(join(75441..75776,75871..76016,76091..76211,76344..76530,77317..77623,87814..87941))
location: region:75441-87941:-1
so has part: feature:87814-87941:-1:exon
so has part: feature:77317-77623:-1:exon
so has part: feature:76344-76530:-1:exon
so has part: feature:76091-76211:-1:exon
so has part: feature:75871-76016:-1:exon
so has part: feature:75441-75776:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:87814-87941:-1:exon

position:87814:-1
position: 87814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:77317-77623:-1:exon

position:77317:-1
position: 77317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77623:-1
position: 77623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:76344-76530:-1:exon

position:76344:-1
position: 76344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76530:-1
position: 76530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:76091-76211:-1:exon

position:76091:-1
position: 76091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76211:-1
position: 76211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:75871-76016:-1:exon

position:75871:-1
position: 75871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76016:-1
position: 76016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:75441-75776:-1:exon

position:75776:-1
position: 75776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116096483
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35658
gene: LOC116096483
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: testis-specific Y-encoded protein 1-like
translation: MLVFVSHKVTEMVGVKNEGEEVKEHQQKGEQDQHPELEKDPEQTCDSKDQQGXQRLPQSGGGPAEHRKIIIQVIPGFWPKAVCILKCSLWTLAAKIVSWIRRTMGKDIMFTCLCGVLLQGLLFINTMAHLLLAPLFHSIATFLDQKQMLSIISNQDEDLLSYMLSLEVEEYNPELRMCRMMFFFSENPYFQNDIVTKNYHLSIIAMYGYKESDSSTIEWIGQAEHGYANCMQDTTRLTLFNWLCAHKFPGSNRIAEIIMDDLWPNPLYYYPKKDYS
SIO_010081: LOC116096483
subclass of: SO_0000673
so part of: LOC116096483
location: complement(join(75714..75776,75871..76016,76091..76211,76344..76530,77317..77623,87814..87819))
location: region:75714-87819:-1
so has part: feature:87814-87819:-1:exon
so has part: feature:77317-77623:-1:exon
so has part: feature:76344-76530:-1:exon
so has part: feature:76091-76211:-1:exon
so has part: feature:75871-76016:-1:exon
so has part: feature:75714-75776:-1:exon

XP_031234182.1
type: Protein
SIO_000068: ncbiprotein

position:75714:-1
position: 75714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87819:-1
position: 87819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87814-87819:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:77317-77623:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:76344-76530:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:76091-76211:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:75871-76016:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:75714-75776:-1:exon

LOC116096502
type: Gene
subclass of: SO_0000704
RO_0002162: 35658
gene: LOC116096502
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(87346..213386)
location: region:87346-213386:-1
so has part: feature:87346-213386:-1:exon
subclass of: SO_0000010

116096502
type: Gene
SIO_000068: ncbigene

position:87346:-1
position: 87346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213386:-1
position: 213386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87346-213386:-1:exon

LOC116096502
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35658
gene: LOC116096502
product: histone demethylase UTY, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031378400.1
SIO_010081: LOC116096502
subclass of: SO_0000673
so part of: LOC116096502
location: complement(join(87346..88156,89205..89375,92503..92629,101229..101370,102179..102366,105144..105258,106776..106924,107340..107414,107489..107553,120527..120732,120834..120939,122200..122329,126903..127609,137048..137143,138055..138189,138905..139124,139779..139877,145399..145525,148072..148165,165397..165431,167779..167833,174438..174558,176697..176755,189485..189534,207145..207253,212648..212711,213004..213386))
location: region:87346-213386:-1
so has part: feature:213004-213386:-1:exon
so has part: feature:212648-212711:-1:exon
so has part: feature:207145-207253:-1:exon
so has part: feature:189485-189534:-1:exon
so has part: feature:176697-176755:-1:exon
so has part: feature:174438-174558:-1:exon
so has part: feature:167779-167833:-1:exon
so has part: feature:165397-165431:-1:exon
so has part: feature:148072-148165:-1:exon
so has part: feature:145399-145525:-1:exon
so has part: feature:139779-139877:-1:exon
so has part: feature:138905-139124:-1:exon
so has part: feature:138055-138189:-1:exon
so has part: feature:137048-137143:-1:exon
so has part: feature:126903-127609:-1:exon
so has part: feature:122200-122329:-1:exon
so has part: feature:120834-120939:-1:exon
so has part: feature:120527-120732:-1:exon
so has part: feature:107489-107553:-1:exon
so has part: feature:107340-107414:-1:exon
so has part: feature:106776-106924:-1:exon
so has part: feature:105144-105258:-1:exon
so has part: feature:102179-102366:-1:exon
so has part: feature:101229-101370:-1:exon
so has part: feature:92503-92629:-1:exon
so has part: feature:89205-89375:-1:exon
so has part: feature:87346-88156:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:213004-213386:-1:exon

position:213004:-1
position: 213004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:212648-212711:-1:exon

position:212648:-1
position: 212648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212711:-1
position: 212711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:207145-207253:-1:exon

position:207145:-1
position: 207145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:207253:-1
position: 207253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:189485-189534:-1:exon

position:189485:-1
position: 189485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189534:-1
position: 189534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:176697-176755:-1:exon

position:176697:-1
position: 176697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176755:-1
position: 176755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:174438-174558:-1:exon

position:174438:-1
position: 174438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174558:-1
position: 174558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:167779-167833:-1:exon

position:167779:-1
position: 167779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167833:-1
position: 167833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:165397-165431:-1:exon

position:165397:-1
position: 165397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165431:-1
position: 165431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:148072-148165:-1:exon

position:148072:-1
position: 148072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148165:-1
position: 148165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:145399-145525:-1:exon

position:145399:-1
position: 145399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145525:-1
position: 145525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:139779-139877:-1:exon

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urn:…
SIO_000300: 12
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urn:…
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SIO_000628: feature:138055-138189:-1:exon

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urn:…
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urn:…
SIO_000300: 22
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SIO_000300: 23
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urn:…
SIO_000300: 25
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SIO_000300: 27
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LOC116096502
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35658
gene: LOC116096502
product: histone demethylase UTY, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031378371.1
SIO_010081: LOC116096502
subclass of: SO_0000673
so part of: LOC116096502
location: complement(join(87346..88156,89205..89375,92503..92629,101229..101370,102179..102366,105144..105258,106776..106924,107340..107414,107489..107553,120527..120732,120834..120939,122200..122329,126903..127609,137048..137143,138055..138189,138905..139124,139779..139877,145399..145525,148072..148165,165397..165431,167779..167833,174438..174558,176697..176755,189485..189534,207145..207253,212648..212708,212898..213386))
location: region:87346-213386:-1
so has part: feature:212898-213386:-1:exon
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urn:…
SIO_000300: 1
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urn:…
SIO_000300: 2
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urn:…
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SIO_000300: 15
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SIO_000300: 17
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SIO_000300: 22
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urn:…
SIO_000300: 23
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urn:…
SIO_000300: 24
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urn:…
SIO_000300: 25
SIO_000628: feature:92503-92629:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:89205-89375:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:87346-88156:-1:exon

LOC116096502
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35658
gene: LOC116096502
product: histone demethylase UTY, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031378380.1
SIO_010081: LOC116096502
subclass of: SO_0000673
so part of: LOC116096502
location: complement(join(87346..88156,89205..89375,92503..92629,101229..101370,102179..102366,105144..105258,106776..106924,107489..107553,120527..120732,120834..120939,122200..122329,126903..127609,137048..137143,138055..138189,138905..139124,139779..139877,145399..145525,148072..148165,165397..165431,167779..167833,174438..174558,176697..176755,189485..189534,207145..207253,212648..212711,212898..213386))
location: region:87346-213386:-1
so has part: feature:212898-213386:-1:exon
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so has part: feature:207145-207253:-1:exon
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urn:…
SIO_000300: 1
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urn:…
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urn:…
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SIO_000300: 9
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SIO_000300: 24
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urn:…
SIO_000300: 25
SIO_000628: feature:89205-89375:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:87346-88156:-1:exon

LOC116096502
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35658
gene: LOC116096502
product: histone demethylase UTY, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031378390.1
SIO_010081: LOC116096502
subclass of: SO_0000673
so part of: LOC116096502
location: complement(join(87346..88156,89205..89375,92503..92629,101229..101370,102179..102288,105144..105258,106776..106924,107340..107414,107489..107553,120527..120732,120834..120939,122200..122329,126903..127609,137048..137143,138055..138189,138905..139124,139779..139877,145399..145525,148072..148165,165397..165431,167779..167833,174438..174558,176697..176755,189485..189534,207145..207253,212648..212711,212898..213386))
location: region:87346-213386:-1
so has part: feature:212898-213386:-1:exon
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urn:…
SIO_000300: 1
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urn:…
SIO_000300: 23
SIO_000628: feature:102179-102288:-1:exon

position:102288:-1
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urn:…
SIO_000300: 24
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SIO_000300: 25
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urn:…
SIO_000300: 27
SIO_000628: feature:87346-88156:-1:exon

LOC116096502
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35658
gene: LOC116096502
product: histone demethylase UTY, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031378362.1
SIO_010081: LOC116096502
subclass of: SO_0000673
so part of: LOC116096502
location: complement(join(87346..88156,89205..89375,92503..92629,101229..101370,102179..102366,105144..105258,106776..106924,107340..107414,107489..107553,120527..120732,120834..120939,122200..122329,126903..127609,137048..137143,138055..138189,138905..139124,139779..139877,145399..145525,148072..148165,165397..165431,167779..167833,174438..174558,176697..176755,189485..189534,207145..207253,212648..212711,212898..213386))
location: region:87346-213386:-1
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urn:…
SIO_000300: 1
SIO_000628: feature:212898-213386:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:212648-212711:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:207145-207253:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:189485-189534:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:176697-176755:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:174438-174558:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:167779-167833:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:165397-165431:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:148072-148165:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:145399-145525:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:139779-139877:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:138905-139124:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:138055-138189:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:137048-137143:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:126903-127609:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:122200-122329:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:120834-120939:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:120527-120732:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:107489-107553:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:107340-107414:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:106776-106924:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:105144-105258:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:102179-102366:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:101229-101370:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:92503-92629:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:89205-89375:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:87346-88156:-1:exon

LOC116096502
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35658
gene: LOC116096502
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone demethylase UTY isoform X2
translation: MKSHGLSVATAVLGNEEKKMAAEKARGEGEEGPFSLTVEEKKALCGLDSFFGFLNQCKDGAKMKTLLSKAIHCYESLIVKAEGKVESDFFCQLGHFNLLLEDYSKALSSYQRYYSLQTDYWKNAAFLYGLGLVYFYYNAFQWAIRAFQEVLYVDPNFCRAKEIHLRLGFMFKVNTDYESSLKHFQLALIDCNVCTLSSVEIQFHIAHLYETQKKYHSAKAAYEQLLQIESLPSQVKATVLQQLGWMHHNMDLVGDKTTKERYAIQYLQKSLEEDPNSGQSWYFLGRCYSCIGKVQDAFVSYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHGHAAAWMDLGILYESCNQPQDAIKCYLNATRSKSCNNISALTSRIKFLQAQLCNLPQSSPQNKTKLLPSIEEAWSLPIPAELTSRQGAMNTAQQNISDSWNSVQTSLHHLVQQKVYTQCFTTQKLQSLGRQPPFQTESALYLQAASTSDQNQNGNHTQPQNSKGDAQNHFSLHIPTSEEQKIINFTKESKDSRSKSLSSKTSRQDRDASNTCVNAKEHSNHINQISSVPISSLNNEDSVSPNLIILDNPQLSVLVGEVIDSVDRDTGTCDKVSNVHPAIQKKPNNLSASSLSSASSTETLSLKLTEQTHSPHSGLHTINGERHENSESSVSVNVGLRPRPQIIPSMSVSIYSSSTEVLKACRNLGKNGLSNGHILLDLCPPPRPPTSPYPPLPKEKLNPPTPSIYLENKRDAFFPPLHQFCINPKNPVTVIRGLAGALKLDLGLFSTKTLVEANNEHIVEVRTQLLQPADENWDPSGTKKIWRYENKSSHTTIAKYAQYQACSFQESLREENERRTQVKDYSDNESTCSDISGRRQKAPFKTIKCGINIDLSDNKKWKLQLHELTKLPAFVRVVSAGNLLSHVGYTILGMNSVQLCMKVPGSRIPGHQENNNFCSVNINIGPGDCEWFVVPEDYWGVLNDFCEKNNLNFLMSSWWPNLEDLYEANVPVYRFIQRPGDLVWINAGTVYWVQAVGWCNNITWNVGPLTAFQYKLAIERYEWNKLQSIKSVVPMVHLSWNMARNIKISDPKLFEMIKYCLLKILKQCQTLREALVAAGKEVLWHGRINDEPAPYCSICEVEVFNLLFVTNESNSQKTYIVHCQNCARKTSGNLENFVVLEQYKMEDLIQVCDQFTLAPSLSSTS
SIO_010081: LOC116096502
subclass of: SO_0000673
so part of: LOC116096502
location: complement(join(88130..88156,89205..89375,92503..92629,101229..101370,102179..102366,105144..105258,106776..106924,107340..107414,107489..107553,120527..120732,120834..120939,122200..122329,126903..127609,137048..137143,138055..138189,138905..139124,139779..139877,145399..145525,148072..148165,165397..165431,167779..167833,174438..174558,176697..176755,189485..189534,207145..207253,212648..212708,212898..213043))
location: region:88130-213043:-1
so has part: feature:212898-213043:-1:exon
so has part: feature:212648-212708:-1:exon
so has part: feature:207145-207253:-1:exon
so has part: feature:189485-189534:-1:exon
so has part: feature:176697-176755:-1:exon
so has part: feature:174438-174558:-1:exon
so has part: feature:167779-167833:-1:exon
so has part: feature:165397-165431:-1:exon
so has part: feature:148072-148165:-1:exon
so has part: feature:145399-145525:-1:exon
so has part: feature:139779-139877:-1:exon
so has part: feature:138905-139124:-1:exon
so has part: feature:138055-138189:-1:exon
so has part: feature:137048-137143:-1:exon
so has part: feature:126903-127609:-1:exon
so has part: feature:122200-122329:-1:exon
so has part: feature:120834-120939:-1:exon
so has part: feature:120527-120732:-1:exon
so has part: feature:107489-107553:-1:exon
so has part: feature:107340-107414:-1:exon
so has part: feature:106776-106924:-1:exon
so has part: feature:105144-105258:-1:exon
so has part: feature:102179-102366:-1:exon
so has part: feature:101229-101370:-1:exon
so has part: feature:92503-92629:-1:exon
so has part: feature:89205-89375:-1:exon
so has part: feature:88130-88156:-1:exon

XP_031234231.1
type: Protein
SIO_000068: ncbiprotein

position:88130:-1
position: 88130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213043:-1
position: 213043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212898-213043:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:212648-212708:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:207145-207253:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:189485-189534:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:176697-176755:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:174438-174558:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:167779-167833:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:165397-165431:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:148072-148165:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:145399-145525:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:139779-139877:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:138905-139124:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:138055-138189:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:137048-137143:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:126903-127609:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:122200-122329:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:120834-120939:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:120527-120732:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:107489-107553:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:107340-107414:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:106776-106924:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:105144-105258:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:102179-102366:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:101229-101370:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:92503-92629:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:89205-89375:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:88130-88156:-1:exon

LOC116096502
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35658
gene: LOC116096502
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone demethylase UTY isoform X3
translation: MKSHGLSVATAVLGNEEKKMAAEKARGEGEEGPFSLTVEEKKALCGLDSSFFGFLNQCKDGAKMKTLLSKAIHCYESLIVKAEGKVESDFFCQLGHFNLLLEDYSKALSSYQRYYSLQTDYWKNAAFLYGLGLVYFYYNAFQWAIRAFQEVLYVDPNFCRAKEIHLRLGFMFKVNTDYESSLKHFQLALIDCNVCTLSSVEIQFHIAHLYETQKKYHSAKAAYEQLLQIESLPSQVKATVLQQLGWMHHNMDLVGDKTTKERYAIQYLQKSLEEDPNSGQSWYFLGRCYSCIGKVQDAFVSYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHGHAAAWMDLGILYESCNQPQDAIKCYLNATRSKSCNNISALTSRIKFLQAQLCNLPQSSPQNKTKLLPSIEEAWSLPIPAELTSRQGAMNTAQQNISDSWNSVQTSLHHLVQQKVYTQCFTTQKLQSLGRQPPFQTESALYLQAASTSDQNQNGNHTQPQNSKGDAQNHFSLHIPTSEEQKIINFTKESKDSRSKSLSSKTSRQDRDASNTCVNAKEHSNHINQISSVPISSLNNEDSVSPNLIILDNPQLSVLVGEVIDSVDRDTGTCDKVSNVHPAIQKKPNNLSASSLSSASSTETLSLKLTEQTHSPHSGLHTINGERHENSESSVSVNVGLRPRPQIIPSMSVSIYSSSTEVLKACRNLGKNGLSNGHILLDLCPPPRPPTSPYPPLPKEKLNPPTPSIYLENKRDAFFPPLHQFCINPKNPVTVIRGLAGALKLDLGLFSTKTLVEANNEHIVEVRTQLLQPADENWDPSGTKKIWRYENKSSHTTIAKYAQYQACSFQESLREENERRTQVKDYSDNESTCSDMWKLQLHELTKLPAFVRVVSAGNLLSHVGYTILGMNSVQLCMKVPGSRIPGHQENNNFCSVNINIGPGDCEWFVVPEDYWGVLNDFCEKNNLNFLMSSWWPNLEDLYEANVPVYRFIQRPGDLVWINAGTVYWVQAVGWCNNITWNVGPLTAFQYKLAIERYEWNKLQSIKSVVPMVHLSWNMARNIKISDPKLFEMIKYCLLKILKQCQTLREALVAAGKEVLWHGRINDEPAPYCSICEVEVFNLLFVTNESNSQKTYIVHCQNCARKTSGNLENFVVLEQYKMEDLIQVCDQFTLAPSLSSTS
SIO_010081: LOC116096502
subclass of: SO_0000673
so part of: LOC116096502
location: complement(join(88130..88156,89205..89375,92503..92629,101229..101370,102179..102366,105144..105258,106776..106924,107489..107553,120527..120732,120834..120939,122200..122329,126903..127609,137048..137143,138055..138189,138905..139124,139779..139877,145399..145525,148072..148165,165397..165431,167779..167833,174438..174558,176697..176755,189485..189534,207145..207253,212648..212711,212898..213043))
location: region:88130-213043:-1
so has part: feature:212898-213043:-1:exon
so has part: feature:212648-212711:-1:exon
so has part: feature:207145-207253:-1:exon
so has part: feature:189485-189534:-1:exon
so has part: feature:176697-176755:-1:exon
so has part: feature:174438-174558:-1:exon
so has part: feature:167779-167833:-1:exon
so has part: feature:165397-165431:-1:exon
so has part: feature:148072-148165:-1:exon
so has part: feature:145399-145525:-1:exon
so has part: feature:139779-139877:-1:exon
so has part: feature:138905-139124:-1:exon
so has part: feature:138055-138189:-1:exon
so has part: feature:137048-137143:-1:exon
so has part: feature:126903-127609:-1:exon
so has part: feature:122200-122329:-1:exon
so has part: feature:120834-120939:-1:exon
so has part: feature:120527-120732:-1:exon
so has part: feature:107489-107553:-1:exon
so has part: feature:106776-106924:-1:exon
so has part: feature:105144-105258:-1:exon
so has part: feature:102179-102366:-1:exon
so has part: feature:101229-101370:-1:exon
so has part: feature:92503-92629:-1:exon
so has part: feature:89205-89375:-1:exon
so has part: feature:88130-88156:-1:exon

XP_031234240.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:212898-213043:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:212648-212711:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:207145-207253:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:189485-189534:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:176697-176755:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:174438-174558:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:167779-167833:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:165397-165431:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:148072-148165:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:145399-145525:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:139779-139877:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:138905-139124:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:138055-138189:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:137048-137143:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:126903-127609:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:122200-122329:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:120834-120939:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:120527-120732:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:107489-107553:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:106776-106924:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:105144-105258:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:102179-102366:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:101229-101370:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:92503-92629:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:89205-89375:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:88130-88156:-1:exon

LOC116096502
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35658
gene: LOC116096502
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone demethylase UTY isoform X4
translation: MKSHGLSVATAVLGNEEKKMAAEKARGEGEEGPFSLTVEEKKALCGLDSSFFGFLNQCKDGAKMKTLLSKAIHCYESLIVKAEGKVESDFFCQLGHFNLLLEDYSKALSSYQRYYSLQTDYWKNAAFLYGLGLVYFYYNAFQWAIRAFQEVLYVDPNFCRAKEIHLRLGFMFKVNTDYESSLKHFQLALIDCNVCTLSSVEIQFHIAHLYETQKKYHSAKAAYEQLLQIESLPSQVKATVLQQLGWMHHNMDLVGDKTTKERYAIQYLQKSLEEDPNSGQSWYFLGRCYSCIGKVQDAFVSYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHGHAAAWMDLGILYESCNQPQDAIKCYLNATRSKSCNNISALTSRIKFLQAQLCNLPQSSPQNKTKLLPSIEEAWSLPIPAELTSRQGAMNTAQQNISDSWNSVQTSLHHLVQQKVYTQCFTTQKLQSLGRQPPFQTESALYLQAASTSDQNQNGNHTQPQNSKGDAQNHFSLHIPTSEEQKIINFTKESKDSRSKSLSSKTSRQDRDASNTCVNAKEHSNHINQISSVPISSLNNEDSVSPNLIILDNPQLSVLVGEVIDSVDRDTGTCDKVSNVHPAIQKKPNNLSASSLSSASSTETLSLKLTEQTHSPHSGLHTINGERHENSESSVSVNVGLRPRPQIIPSMSVSIYSSSTEVLKACRNLGKNGLSNGHILLDLCPPPRPPTSPYPPLPKEKLNPPTPSIYLENKRDAFFPPLHQFCINPKNPVTVIRGLAGALKLDLGLFSTKTLVEANNEHIVEVRTQLLQPADENWDPSGTKKIWRYENKSSHTTIAKYAQYQACSFQESLREENERRTQVKDYSDNESTCSDISGRRQKAPFKTIKCGINIDLSDNKKWKLQLHELTKLPAFVRVVSAGNLLSHVGYTILGMNSVQLCMKVPGSRIPGHQENNNFCSVNINIGPGDCEWFVVPEDYWGVLNDFCEKFIQRPGDLVWINAGTVYWVQAVGWCNNITWNVGPLTAFQYKLAIERYEWNKLQSIKSVVPMVHLSWNMARNIKISDPKLFEMIKYCLLKILKQCQTLREALVAAGKEVLWHGRINDEPAPYCSICEVEVFNLLFVTNESNSQKTYIVHCQNCARKTSGNLENFVVLEQYKMEDLIQVCDQFTLAPSLSSTS
SIO_010081: LOC116096502
subclass of: SO_0000673
so part of: LOC116096502
location: complement(join(88130..88156,89205..89375,92503..92629,101229..101370,102179..102288,105144..105258,106776..106924,107340..107414,107489..107553,120527..120732,120834..120939,122200..122329,126903..127609,137048..137143,138055..138189,138905..139124,139779..139877,145399..145525,148072..148165,165397..165431,167779..167833,174438..174558,176697..176755,189485..189534,207145..207253,212648..212711,212898..213043))
location: region:88130-213043:-1
so has part: feature:212898-213043:-1:exon
so has part: feature:212648-212711:-1:exon
so has part: feature:207145-207253:-1:exon
so has part: feature:189485-189534:-1:exon
so has part: feature:176697-176755:-1:exon
so has part: feature:174438-174558:-1:exon
so has part: feature:167779-167833:-1:exon
so has part: feature:165397-165431:-1:exon
so has part: feature:148072-148165:-1:exon
so has part: feature:145399-145525:-1:exon
so has part: feature:139779-139877:-1:exon
so has part: feature:138905-139124:-1:exon
so has part: feature:138055-138189:-1:exon
so has part: feature:137048-137143:-1:exon
so has part: feature:126903-127609:-1:exon
so has part: feature:122200-122329:-1:exon
so has part: feature:120834-120939:-1:exon
so has part: feature:120527-120732:-1:exon
so has part: feature:107489-107553:-1:exon
so has part: feature:107340-107414:-1:exon
so has part: feature:106776-106924:-1:exon
so has part: feature:105144-105258:-1:exon
so has part: feature:102179-102288:-1:exon
so has part: feature:101229-101370:-1:exon
so has part: feature:92503-92629:-1:exon
so has part: feature:89205-89375:-1:exon
so has part: feature:88130-88156:-1:exon

XP_031234250.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:212898-213043:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:212648-212711:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:207145-207253:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:189485-189534:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:176697-176755:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:174438-174558:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:167779-167833:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:165397-165431:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:148072-148165:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:145399-145525:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:139779-139877:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:138905-139124:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:138055-138189:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:137048-137143:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:126903-127609:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:122200-122329:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:120834-120939:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:120527-120732:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:107489-107553:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:107340-107414:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:106776-106924:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:105144-105258:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:102179-102288:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:101229-101370:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:92503-92629:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:89205-89375:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:88130-88156:-1:exon

LOC116096502
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35658
gene: LOC116096502
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone demethylase UTY isoform X1
translation: MKSHGLSVATAVLGNEEKKMAAEKARGEGEEGPFSLTVEEKKALCGLDSSFFGFLNQCKDGAKMKTLLSKAIHCYESLIVKAEGKVESDFFCQLGHFNLLLEDYSKALSSYQRYYSLQTDYWKNAAFLYGLGLVYFYYNAFQWAIRAFQEVLYVDPNFCRAKEIHLRLGFMFKVNTDYESSLKHFQLALIDCNVCTLSSVEIQFHIAHLYETQKKYHSAKAAYEQLLQIESLPSQVKATVLQQLGWMHHNMDLVGDKTTKERYAIQYLQKSLEEDPNSGQSWYFLGRCYSCIGKVQDAFVSYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHGHAAAWMDLGILYESCNQPQDAIKCYLNATRSKSCNNISALTSRIKFLQAQLCNLPQSSPQNKTKLLPSIEEAWSLPIPAELTSRQGAMNTAQQNISDSWNSVQTSLHHLVQQKVYTQCFTTQKLQSLGRQPPFQTESALYLQAASTSDQNQNGNHTQPQNSKGDAQNHFSLHIPTSEEQKIINFTKESKDSRSKSLSSKTSRQDRDASNTCVNAKEHSNHINQISSVPISSLNNEDSVSPNLIILDNPQLSVLVGEVIDSVDRDTGTCDKVSNVHPAIQKKPNNLSASSLSSASSTETLSLKLTEQTHSPHSGLHTINGERHENSESSVSVNVGLRPRPQIIPSMSVSIYSSSTEVLKACRNLGKNGLSNGHILLDLCPPPRPPTSPYPPLPKEKLNPPTPSIYLENKRDAFFPPLHQFCINPKNPVTVIRGLAGALKLDLGLFSTKTLVEANNEHIVEVRTQLLQPADENWDPSGTKKIWRYENKSSHTTIAKYAQYQACSFQESLREENERRTQVKDYSDNESTCSDISGRRQKAPFKTIKCGINIDLSDNKKWKLQLHELTKLPAFVRVVSAGNLLSHVGYTILGMNSVQLCMKVPGSRIPGHQENNNFCSVNINIGPGDCEWFVVPEDYWGVLNDFCEKNNLNFLMSSWWPNLEDLYEANVPVYRFIQRPGDLVWINAGTVYWVQAVGWCNNITWNVGPLTAFQYKLAIERYEWNKLQSIKSVVPMVHLSWNMARNIKISDPKLFEMIKYCLLKILKQCQTLREALVAAGKEVLWHGRINDEPAPYCSICEVEVFNLLFVTNESNSQKTYIVHCQNCARKTSGNLENFVVLEQYKMEDLIQVCDQFTLAPSLSSTS
SIO_010081: LOC116096502
subclass of: SO_0000673
so part of: LOC116096502
location: complement(join(88130..88156,89205..89375,92503..92629,101229..101370,102179..102366,105144..105258,106776..106924,107340..107414,107489..107553,120527..120732,120834..120939,122200..122329,126903..127609,137048..137143,138055..138189,138905..139124,139779..139877,145399..145525,148072..148165,165397..165431,167779..167833,174438..174558,176697..176755,189485..189534,207145..207253,212648..212711,212898..213043))
location: region:88130-213043:-1
so has part: feature:212898-213043:-1:exon
so has part: feature:212648-212711:-1:exon
so has part: feature:207145-207253:-1:exon
so has part: feature:189485-189534:-1:exon
so has part: feature:176697-176755:-1:exon
so has part: feature:174438-174558:-1:exon
so has part: feature:167779-167833:-1:exon
so has part: feature:165397-165431:-1:exon
so has part: feature:148072-148165:-1:exon
so has part: feature:145399-145525:-1:exon
so has part: feature:139779-139877:-1:exon
so has part: feature:138905-139124:-1:exon
so has part: feature:138055-138189:-1:exon
so has part: feature:137048-137143:-1:exon
so has part: feature:126903-127609:-1:exon
so has part: feature:122200-122329:-1:exon
so has part: feature:120834-120939:-1:exon
so has part: feature:120527-120732:-1:exon
so has part: feature:107489-107553:-1:exon
so has part: feature:107340-107414:-1:exon
so has part: feature:106776-106924:-1:exon
so has part: feature:105144-105258:-1:exon
so has part: feature:102179-102366:-1:exon
so has part: feature:101229-101370:-1:exon
so has part: feature:92503-92629:-1:exon
so has part: feature:89205-89375:-1:exon
so has part: feature:88130-88156:-1:exon

XP_031234222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:212898-213043:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:212648-212711:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:207145-207253:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:189485-189534:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:176697-176755:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:174438-174558:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:167779-167833:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:165397-165431:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:148072-148165:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:145399-145525:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:139779-139877:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:138905-139124:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:138055-138189:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:137048-137143:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:126903-127609:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:122200-122329:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:120834-120939:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:120527-120732:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:107489-107553:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:107340-107414:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:106776-106924:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:105144-105258:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:102179-102366:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:101229-101370:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:92503-92629:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:89205-89375:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:88130-88156:-1:exon

LOC116096502
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35658
gene: LOC116096502
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone demethylase UTY isoform X5
translation: MKTLLSKAIHCYESLIVKAEGKVESDFFCQLGHFNLLLEDYSKALSSYQRYYSLQTDYWKNAAFLYGLGLVYFYYNAFQWAIRAFQEVLYVDPNFCRAKEIHLRLGFMFKVNTDYESSLKHFQLALIDCNVCTLSSVEIQFHIAHLYETQKKYHSAKAAYEQLLQIESLPSQVKATVLQQLGWMHHNMDLVGDKTTKERYAIQYLQKSLEEDPNSGQSWYFLGRCYSCIGKVQDAFVSYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHGHAAAWMDLGILYESCNQPQDAIKCYLNATRSKSCNNISALTSRIKFLQAQLCNLPQSSPQNKTKLLPSIEEAWSLPIPAELTSRQGAMNTAQQNISDSWNSVQTSLHHLVQQKVYTQCFTTQKLQSLGRQPPFQTESALYLQAASTSDQNQNGNHTQPQNSKGDAQNHFSLHIPTSEEQKIINFTKESKDSRSKSLSSKTSRQDRDASNTCVNAKEHSNHINQISSVPISSLNNEDSVSPNLIILDNPQLSVLVGEVIDSVDRDTGTCDKVSNVHPAIQKKPNNLSASSLSSASSTETLSLKLTEQTHSPHSGLHTINGERHENSESSVSVNVGLRPRPQIIPSMSVSIYSSSTEVLKACRNLGKNGLSNGHILLDLCPPPRPPTSPYPPLPKEKLNPPTPSIYLENKRDAFFPPLHQFCINPKNPVTVIRGLAGALKLDLGLFSTKTLVEANNEHIVEVRTQLLQPADENWDPSGTKKIWRYENKSSHTTIAKYAQYQACSFQESLREENERRTQVKDYSDNESTCSDISGRRQKAPFKTIKCGINIDLSDNKKWKLQLHELTKLPAFVRVVSAGNLLSHVGYTILGMNSVQLCMKVPGSRIPGHQENNNFCSVNINIGPGDCEWFVVPEDYWGVLNDFCEKNNLNFLMSSWWPNLEDLYEANVPVYRFIQRPGDLVWINAGTVYWVQAVGWCNNITWNVGPLTAFQYKLAIERYEWNKLQSIKSVVPMVHLSWNMARNIKISDPKLFEMIKYCLLKILKQCQTLREALVAAGKEVLWHGRINDEPAPYCSICEVEVFNLLFVTNESNSQKTYIVHCQNCARKTSGNLENFVVLEQYKMEDLIQVCDQFTLAPSLSSTS
SIO_010081: LOC116096502
subclass of: SO_0000673
so part of: LOC116096502
location: complement(join(88130..88156,89205..89375,92503..92629,101229..101370,102179..102366,105144..105258,106776..106924,107340..107414,107489..107553,120527..120732,120834..120939,122200..122329,126903..127609,137048..137143,138055..138189,138905..139124,139779..139877,145399..145525,148072..148165,165397..165431,167779..167833,174438..174558,176697..176755,189485..189534,207145..207253,212648..212668))
location: region:88130-212668:-1
so has part: feature:212648-212668:-1:exon
so has part: feature:207145-207253:-1:exon
so has part: feature:189485-189534:-1:exon
so has part: feature:176697-176755:-1:exon
so has part: feature:174438-174558:-1:exon
so has part: feature:167779-167833:-1:exon
so has part: feature:165397-165431:-1:exon
so has part: feature:148072-148165:-1:exon
so has part: feature:145399-145525:-1:exon
so has part: feature:139779-139877:-1:exon
so has part: feature:138905-139124:-1:exon
so has part: feature:138055-138189:-1:exon
so has part: feature:137048-137143:-1:exon
so has part: feature:126903-127609:-1:exon
so has part: feature:122200-122329:-1:exon
so has part: feature:120834-120939:-1:exon
so has part: feature:120527-120732:-1:exon
so has part: feature:107489-107553:-1:exon
so has part: feature:107340-107414:-1:exon
so has part: feature:106776-106924:-1:exon
so has part: feature:105144-105258:-1:exon
so has part: feature:102179-102366:-1:exon
so has part: feature:101229-101370:-1:exon
so has part: feature:92503-92629:-1:exon
so has part: feature:89205-89375:-1:exon
so has part: feature:88130-88156:-1:exon

XP_031234260.1
type: Protein
SIO_000068: ncbiprotein

position:212668:-1
position: 212668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212648-212668:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:207145-207253:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:189485-189534:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:176697-176755:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:174438-174558:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:167779-167833:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:165397-165431:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:148072-148165:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:145399-145525:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:139779-139877:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:138905-139124:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:138055-138189:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:137048-137143:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:126903-127609:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:122200-122329:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:120834-120939:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:120527-120732:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:107489-107553:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:107340-107414:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:106776-106924:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:105144-105258:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:102179-102366:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:101229-101370:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:92503-92629:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:89205-89375:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:88130-88156:-1:exon

LOC116096502
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35658
gene: LOC116096502
product: histone demethylase UTY, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031378406.1
SIO_010081: LOC116096502
subclass of: SO_0000673
so part of: LOC116096502
location: complement(join(102311..102366,106776..106924,107340..107414,107489..107553,120527..120732,120834..120939,122200..122329,126903..127609,137048..137143,138055..138189,138905..139124,139779..139877,145399..145525,148072..148165,165397..165431,167779..167833,174438..174558,176697..176755,189485..189534,207145..207253,212648..212711,212898..213386))
location: region:102311-213386:-1
so has part: feature:212898-213386:-1:exon
so has part: feature:212648-212711:-1:exon
so has part: feature:207145-207253:-1:exon
so has part: feature:189485-189534:-1:exon
so has part: feature:176697-176755:-1:exon
so has part: feature:174438-174558:-1:exon
so has part: feature:167779-167833:-1:exon
so has part: feature:165397-165431:-1:exon
so has part: feature:148072-148165:-1:exon
so has part: feature:145399-145525:-1:exon
so has part: feature:139779-139877:-1:exon
so has part: feature:138905-139124:-1:exon
so has part: feature:138055-138189:-1:exon
so has part: feature:137048-137143:-1:exon
so has part: feature:126903-127609:-1:exon
so has part: feature:122200-122329:-1:exon
so has part: feature:120834-120939:-1:exon
so has part: feature:120527-120732:-1:exon
so has part: feature:107489-107553:-1:exon
so has part: feature:107340-107414:-1:exon
so has part: feature:106776-106924:-1:exon
so has part: feature:102311-102366:-1:exon

position:102311:-1
position: 102311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212898-213386:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:212648-212711:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:207145-207253:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:189485-189534:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:176697-176755:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:174438-174558:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:167779-167833:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:165397-165431:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:148072-148165:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:145399-145525:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:139779-139877:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:138905-139124:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:138055-138189:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:137048-137143:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:126903-127609:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:122200-122329:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:120834-120939:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:120527-120732:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:107489-107553:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:107340-107414:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:106776-106924:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:102311-102366:-1:exon

LOC116096502
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35658
gene: LOC116096502
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone demethylase UTY isoform X6
translation: MKSHGLSVATAVLGNEEKKMAAEKARGEGEEGPFSLTVEEKKALCGLDSSFFGFLNQCKDGAKMKTLLSKAIHCYESLIVKAEGKVESDFFCQLGHFNLLLEDYSKALSSYQRYYSLQTDYWKNAAFLYGLGLVYFYYNAFQWAIRAFQEVLYVDPNFCRAKEIHLRLGFMFKVNTDYESSLKHFQLALIDCNVCTLSSVEIQFHIAHLYETQKKYHSAKAAYEQLLQIESLPSQVKATVLQQLGWMHHNMDLVGDKTTKERYAIQYLQKSLEEDPNSGQSWYFLGRCYSCIGKVQDAFVSYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHGHAAAWMDLGILYESCNQPQDAIKCYLNATRSKSCNNISALTSRIKFLQAQLCNLPQSSPQNKTKLLPSIEEAWSLPIPAELTSRQGAMNTAQQNISDSWNSVQTSLHHLVQQKVYTQCFTTQKLQSLGRQPPFQTESALYLQAASTSDQNQNGNHTQPQNSKGDAQNHFSLHIPTSEEQKIINFTKESKDSRSKSLSSKTSRQDRDASNTCVNAKEHSNHINQISSVPISSLNNEDSVSPNLIILDNPQLSVLVGEVIDSVDRDTGTCDKVSNVHPAIQKKPNNLSASSLSSASSTETLSLKLTEQTHSPHSGLHTINGERHENSESSVSVNVGLRPRPQIIPSMSVSIYSSSTEVLKACRNLGKNGLSNGHILLDLCPPPRPPTSPYPPLPKEKLNPPTPSIYLENKRDAFFPPLHQFCINPKNPVTVIRGLAGALKLDLGLFSTKTLVEANNEHIVEVRTQLLQPADENWDPSGTKKIWRYENKSSHTTIAKYAQYQACSFQESLREENERRTQVKDYSDNESTCSDISGRRQKAPFKTIKCGINIDLSDNKKWKLQLHELTKLPAFVRVVSAGNLLSHVGYTILGMNSVQLCMKVPGSRIPEII
SIO_010081: LOC116096502
subclass of: SO_0000673
so part of: LOC116096502
location: complement(join(102356..102366,106776..106924,107340..107414,107489..107553,120527..120732,120834..120939,122200..122329,126903..127609,137048..137143,138055..138189,138905..139124,139779..139877,145399..145525,148072..148165,165397..165431,167779..167833,174438..174558,176697..176755,189485..189534,207145..207253,212648..212711,212898..213043))
location: region:102356-213043:-1
so has part: feature:212898-213043:-1:exon
so has part: feature:212648-212711:-1:exon
so has part: feature:207145-207253:-1:exon
so has part: feature:189485-189534:-1:exon
so has part: feature:176697-176755:-1:exon
so has part: feature:174438-174558:-1:exon
so has part: feature:167779-167833:-1:exon
so has part: feature:165397-165431:-1:exon
so has part: feature:148072-148165:-1:exon
so has part: feature:145399-145525:-1:exon
so has part: feature:139779-139877:-1:exon
so has part: feature:138905-139124:-1:exon
so has part: feature:138055-138189:-1:exon
so has part: feature:137048-137143:-1:exon
so has part: feature:126903-127609:-1:exon
so has part: feature:122200-122329:-1:exon
so has part: feature:120834-120939:-1:exon
so has part: feature:120527-120732:-1:exon
so has part: feature:107489-107553:-1:exon
so has part: feature:107340-107414:-1:exon
so has part: feature:106776-106924:-1:exon
so has part: feature:102356-102366:-1:exon

XP_031234266.1
type: Protein
SIO_000068: ncbiprotein

position:102356:-1
position: 102356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212898-213043:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:212648-212711:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:207145-207253:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:189485-189534:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:176697-176755:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:174438-174558:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:167779-167833:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:165397-165431:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:148072-148165:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:145399-145525:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:139779-139877:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:138905-139124:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:138055-138189:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:137048-137143:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:126903-127609:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:122200-122329:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:120834-120939:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:120527-120732:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:107489-107553:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:107340-107414:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:106776-106924:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:102356-102366:-1:exon

LOC116096538
type: Gene
subclass of: SO_0000704
RO_0002162: 35658
gene: LOC116096538
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 190854..192169
location: region:190854-192169:1
so has part: feature:190854-192169:1:exon

116096538
type: Gene
SIO_000068: ncbigene

position:190854:1
position: 190854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192169:1
position: 192169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190854-192169:1:exon

LOC116096538
type: Exon
subclass of: SO_0000147
RO_0002162: 35658
gene: LOC116096538
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116096538
subclass of: SO_0000673
so part of: LOC116096538
location: 190854..190876
location: region:190854-190876:1
so has part: feature:190854-190876:1:exon

position:190876:1
position: 190876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190854-190876:1:exon

LOC116096538
type: Exon
subclass of: SO_0000147
RO_0002162: 35658
gene: LOC116096538
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116096538
subclass of: SO_0000673
so part of: LOC116096538
location: 191102..191441
location: region:191102-191441:1
so has part: feature:191102-191441:1:exon

position:191102:1
position: 191102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191441:1
position: 191441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191102-191441:1:exon

LOC116096538
type: Exon
subclass of: SO_0000147
RO_0002162: 35658
gene: LOC116096538
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116096538
subclass of: SO_0000673
so part of: LOC116096538
location: 191729..192169
location: region:191729-192169:1
so has part: feature:191729-192169:1:exon

position:191729:1
position: 191729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191729-192169:1:exon

LOC116096491
type: Gene
subclass of: SO_0000704
RO_0002162: 35658
gene: LOC116096491
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(239842..257042)
location: region:239842-257042:-1
so has part: feature:239842-257042:-1:exon
subclass of: SO_0000010

116096491
type: Gene
SIO_000068: ncbigene

position:239842:-1
position: 239842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257042:-1
position: 257042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239842-257042:-1:exon

LOC116096491
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35658
gene: LOC116096491
product: ATP-dependent RNA helicase DDX3Y
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031378335.1
SIO_010081: LOC116096491
subclass of: SO_0000673
so part of: LOC116096491
location: complement(join(239842..239937,240295..240425,240784..240937,241745..241862,241932..242113,242465..242591,243375..243440,243516..243614,244056..244141,245839..245974,248003..248102,248572..248727,249706..249835,251705..251752,253417..253477,256890..257042))
location: region:239842-257042:-1
so has part: feature:256890-257042:-1:exon
so has part: feature:253417-253477:-1:exon
so has part: feature:251705-251752:-1:exon
so has part: feature:249706-249835:-1:exon
so has part: feature:248572-248727:-1:exon
so has part: feature:248003-248102:-1:exon
so has part: feature:245839-245974:-1:exon
so has part: feature:244056-244141:-1:exon
so has part: feature:243516-243614:-1:exon
so has part: feature:243375-243440:-1:exon
so has part: feature:242465-242591:-1:exon
so has part: feature:241932-242113:-1:exon
so has part: feature:241745-241862:-1:exon
so has part: feature:240784-240937:-1:exon
so has part: feature:240295-240425:-1:exon
so has part: feature:239842-239937:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:256890-257042:-1:exon

position:256890:-1
position: 256890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:253417-253477:-1:exon

position:253417:-1
position: 253417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:253477:-1
position: 253477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:251705-251752:-1:exon

position:251705:-1
position: 251705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251752:-1
position: 251752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:249706-249835:-1:exon

position:249706:-1
position: 249706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249835:-1
position: 249835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:248572-248727:-1:exon

position:248572:-1
position: 248572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248727:-1
position: 248727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:248003-248102:-1:exon

position:248003:-1
position: 248003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248102:-1
position: 248102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:245839-245974:-1:exon

position:245839:-1
position: 245839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245974:-1
position: 245974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:244056-244141:-1:exon

position:244056:-1
position: 244056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244141:-1
position: 244141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:243516-243614:-1:exon

position:243516:-1
position: 243516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243614:-1
position: 243614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:243375-243440:-1:exon

position:243375:-1
position: 243375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243440:-1
position: 243440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:242465-242591:-1:exon

position:242465:-1
position: 242465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242591:-1
position: 242591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:241932-242113:-1:exon

position:241932:-1
position: 241932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242113:-1
position: 242113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:241745-241862:-1:exon

position:241745:-1
position: 241745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241862:-1
position: 241862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:240784-240937:-1:exon

position:240784:-1
position: 240784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240937:-1
position: 240937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:240295-240425:-1:exon

position:240295:-1
position: 240295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240425:-1
position: 240425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:239842-239937:-1:exon

position:239937:-1
position: 239937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116096491
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35658
gene: LOC116096491
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent RNA helicase DDX3Y
translation: MSQVAAENTVSLDQQFAGLDLNSSDNQNGGGSTESKGRYIPPHLRNRETSKGVCDKDNSAWSYGKDKDAYSSFGSRDSRGKPNYFSDHGSGSRGRFDDHGRSDYDGICGRDRTGFGKFERSGHSRWGDKLDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIENFSDIEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADTVQQILDEYIFLAVGRVGSTSENITQKVVWVEELDKRSFLLDLLNATGKDSLTLVFVETKKGADSLENFLFQERYACTSIHGDRSQKDREEALHQFRSGRKPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNLNITKDLLDLLVEAKQEVPSWLESMAYEHHYKGSSRGRSKSRFSGGFGARDYRQSSGSANAGFNSNRTNSSRSSGSSHNRGFGGGGYGGFYSNDGYGGNYNSQAVDWWGN
SIO_010081: LOC116096491
subclass of: SO_0000673
so part of: LOC116096491
location: complement(join(239858..239937,240295..240425,240784..240937,241745..241862,241932..242113,242465..242591,243375..243440,243516..243614,244056..244141,245839..245974,248003..248102,248572..248727,249706..249835,251705..251752,253417..253477,256890..256934))
location: region:239858-256934:-1
so has part: feature:256890-256934:-1:exon
so has part: feature:253417-253477:-1:exon
so has part: feature:251705-251752:-1:exon
so has part: feature:249706-249835:-1:exon
so has part: feature:248572-248727:-1:exon
so has part: feature:248003-248102:-1:exon
so has part: feature:245839-245974:-1:exon
so has part: feature:244056-244141:-1:exon
so has part: feature:243516-243614:-1:exon
so has part: feature:243375-243440:-1:exon
so has part: feature:242465-242591:-1:exon
so has part: feature:241932-242113:-1:exon
so has part: feature:241745-241862:-1:exon
so has part: feature:240784-240937:-1:exon
so has part: feature:240295-240425:-1:exon
so has part: feature:239858-239937:-1:exon

XP_031234195.1
type: Protein
SIO_000068: ncbiprotein

position:239858:-1
position: 239858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256934:-1
position: 256934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256890-256934:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:253417-253477:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:251705-251752:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249706-249835:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:248572-248727:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:248003-248102:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:245839-245974:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:244056-244141:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:243516-243614:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:243375-243440:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:242465-242591:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:241932-242113:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:241745-241862:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:240784-240937:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:240295-240425:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:239858-239937:-1:exon

LOC116096519
type: Gene
subclass of: SO_0000704
RO_0002162: 35658
gene: LOC116096519
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 272705..324062
location: region:272705-324062:1
so has part: feature:272705-324062:1:exon
subclass of: SO_0000010

116096519
type: Gene
SIO_000068: ncbigene

position:272705:1
position: 272705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324062:1
position: 324062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272705-324062:1:exon

LOC116096519
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35658
gene: LOC116096519
product: lysine-specific demethylase 5D, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031378419.1
SIO_010081: LOC116096519
subclass of: SO_0000673
so part of: LOC116096519
location: join(272705..273256,274449..274526,277411..277533,277760..277930,278506..278640,286217..286355,286452..286615,290985..291143,293516..293635,293721..293879,306176..306357,306448..306610,309303..309422,309547..309741,310012..310193,310272..310396,310529..310676,316896..316992,318007..318365,320027..320165,320818..320997,321136..321273,321486..322082,322562..322643,322773..322972,323059..324062)
location: region:272705-324062:1
so has part: feature:272705-273256:1:exon
so has part: feature:274449-274526:1:exon
so has part: feature:277411-277533:1:exon
so has part: feature:277760-277930:1:exon
so has part: feature:278506-278640:1:exon
so has part: feature:286217-286355:1:exon
so has part: feature:286452-286615:1:exon
so has part: feature:290985-291143:1:exon
so has part: feature:293516-293635:1:exon
so has part: feature:293721-293879:1:exon
so has part: feature:306176-306357:1:exon
so has part: feature:306448-306610:1:exon
so has part: feature:309303-309422:1:exon
so has part: feature:309547-309741:1:exon
so has part: feature:310012-310193:1:exon
so has part: feature:310272-310396:1:exon
so has part: feature:310529-310676:1:exon
so has part: feature:316896-316992:1:exon
so has part: feature:318007-318365:1:exon
so has part: feature:320027-320165:1:exon
so has part: feature:320818-320997:1:exon
so has part: feature:321136-321273:1:exon
so has part: feature:321486-322082:1:exon
so has part: feature:322562-322643:1:exon
so has part: feature:322773-322972:1:exon
so has part: feature:323059-324062:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:272705-273256:1:exon

position:273256:1
position: 273256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:274449-274526:1:exon

position:274449:1
position: 274449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274526:1
position: 274526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:277411-277533:1:exon

position:277411:1
position: 277411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277533:1
position: 277533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:277760-277930:1:exon

position:277760:1
position: 277760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277930:1
position: 277930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:278506-278640:1:exon

position:278506:1
position: 278506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278640:1
position: 278640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:286217-286355:1:exon

position:286217:1
position: 286217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286355:1
position: 286355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:286452-286615:1:exon

position:286452:1
position: 286452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286615:1
position: 286615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:290985-291143:1:exon

position:290985:1
position: 290985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291143:1
position: 291143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:293516-293635:1:exon

position:293516:1
position: 293516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293635:1
position: 293635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:293721-293879:1:exon

position:293721:1
position: 293721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293879:1
position: 293879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:306176-306357:1:exon

position:306176:1
position: 306176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306357:1
position: 306357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:306448-306610:1:exon

position:306448:1
position: 306448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306610:1
position: 306610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:309303-309422:1:exon

position:309303:1
position: 309303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309422:1
position: 309422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:309547-309741:1:exon

position:309547:1
position: 309547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309741:1
position: 309741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:310012-310193:1:exon

position:310012:1
position: 310012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310193:1
position: 310193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:310272-310396:1:exon

position:310272:1
position: 310272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310396:1
position: 310396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:310529-310676:1:exon

position:310529:1
position: 310529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310676:1
position: 310676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:316896-316992:1:exon

position:316896:1
position: 316896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316992:1
position: 316992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:318007-318365:1:exon

position:318007:1
position: 318007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318365:1
position: 318365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:320027-320165:1:exon

position:320027:1
position: 320027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320165:1
position: 320165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:320818-320997:1:exon

position:320818:1
position: 320818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320997:1
position: 320997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:321136-321273:1:exon

position:321136:1
position: 321136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321273:1
position: 321273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:321486-322082:1:exon

position:321486:1
position: 321486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322082:1
position: 322082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:322562-322643:1:exon

position:322562:1
position: 322562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322643:1
position: 322643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:322773-322972:1:exon

position:322773:1
position: 322773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322972:1
position: 322972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:323059-324062:1:exon

position:323059:1
position: 323059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116096519
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35658
gene: LOC116096519
product: lysine-specific demethylase 5D, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031378430.1
SIO_010081: LOC116096519
subclass of: SO_0000673
so part of: LOC116096519
location: join(272705..273040,274449..274526,277411..277533,277760..277930,278506..278640,286217..286355,286452..286615,290985..291143,293516..293635,293721..293879,306176..306357,306448..306610,309303..309422,309547..309741,310012..310193,310272..310396,310529..310676,316896..316992,318007..318365,320027..320165,320818..320997,321136..321273,321486..322082,322562..322643,322773..322972,323059..323804)
location: region:272705-323804:1
so has part: feature:272705-273040:1:exon
so has part: feature:274449-274526:1:exon
so has part: feature:277411-277533:1:exon
so has part: feature:277760-277930:1:exon
so has part: feature:278506-278640:1:exon
so has part: feature:286217-286355:1:exon
so has part: feature:286452-286615:1:exon
so has part: feature:290985-291143:1:exon
so has part: feature:293516-293635:1:exon
so has part: feature:293721-293879:1:exon
so has part: feature:306176-306357:1:exon
so has part: feature:306448-306610:1:exon
so has part: feature:309303-309422:1:exon
so has part: feature:309547-309741:1:exon
so has part: feature:310012-310193:1:exon
so has part: feature:310272-310396:1:exon
so has part: feature:310529-310676:1:exon
so has part: feature:316896-316992:1:exon
so has part: feature:318007-318365:1:exon
so has part: feature:320027-320165:1:exon
so has part: feature:320818-320997:1:exon
so has part: feature:321136-321273:1:exon
so has part: feature:321486-322082:1:exon
so has part: feature:322562-322643:1:exon
so has part: feature:322773-322972:1:exon
so has part: feature:323059-323804:1:exon

position:323804:1
position: 323804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272705-273040:1:exon

position:273040:1
position: 273040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:274449-274526:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:277411-277533:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:277760-277930:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:278506-278640:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:286217-286355:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:286452-286615:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:290985-291143:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:293516-293635:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:293721-293879:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:306176-306357:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:306448-306610:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:309303-309422:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:309547-309741:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:310012-310193:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:310272-310396:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:310529-310676:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:316896-316992:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:318007-318365:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:320027-320165:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:320818-320997:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:321136-321273:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:321486-322082:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:322562-322643:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:322773-322972:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:323059-323804:1:exon

LOC116096519
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35658
gene: LOC116096519
product: lysine-specific demethylase 5D, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031378439.1
SIO_010081: LOC116096519
subclass of: SO_0000673
so part of: LOC116096519
location: join(272705..272965,274449..274526,277411..277533,277760..277930,278506..278640,286217..286355,286452..286615,290985..291143,293516..293635,293721..293879,306176..306357,306448..306610,309303..309422,309547..309741,310012..310193,310272..310396,310529..310676,316896..316992,318007..318365,320027..320165,320818..320997,321136..321273,321486..322082,322562..322643,322773..322972,323059..323804)
location: region:272705-323804:1
so has part: feature:272705-272965:1:exon
so has part: feature:274449-274526:1:exon
so has part: feature:277411-277533:1:exon
so has part: feature:277760-277930:1:exon
so has part: feature:278506-278640:1:exon
so has part: feature:286217-286355:1:exon
so has part: feature:286452-286615:1:exon
so has part: feature:290985-291143:1:exon
so has part: feature:293516-293635:1:exon
so has part: feature:293721-293879:1:exon
so has part: feature:306176-306357:1:exon
so has part: feature:306448-306610:1:exon
so has part: feature:309303-309422:1:exon
so has part: feature:309547-309741:1:exon
so has part: feature:310012-310193:1:exon
so has part: feature:310272-310396:1:exon
so has part: feature:310529-310676:1:exon
so has part: feature:316896-316992:1:exon
so has part: feature:318007-318365:1:exon
so has part: feature:320027-320165:1:exon
so has part: feature:320818-320997:1:exon
so has part: feature:321136-321273:1:exon
so has part: feature:321486-322082:1:exon
so has part: feature:322562-322643:1:exon
so has part: feature:322773-322972:1:exon
so has part: feature:323059-323804:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:272705-272965:1:exon

position:272965:1
position: 272965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:274449-274526:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:277411-277533:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:277760-277930:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:278506-278640:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:286217-286355:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:286452-286615:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:290985-291143:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:293516-293635:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:293721-293879:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:306176-306357:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:306448-306610:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:309303-309422:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:309547-309741:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:310012-310193:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:310272-310396:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:310529-310676:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:316896-316992:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:318007-318365:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:320027-320165:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:320818-320997:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:321136-321273:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:321486-322082:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:322562-322643:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:322773-322972:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:323059-323804:1:exon

LOC116096519
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35658
gene: LOC116096519
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine-specific demethylase 5D isoform X1
translation: MKLGSDDFLPPPECPVFEPTWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWHPPFAVEVDNFRFTPRIQRLNELEAQTRVKLNYLDQIAKFWEIQGSSLKIPNVERKILDLYSLNKIVMEEGGYEAICKDRRWARVAQRLNYPSGKNIGSLLRSHYERIIYPYEMFQSGANLVQCNTDPFDSEEKDKEYKPHSIPLRQSVQPSKFSCYNRRAKRLQPEPEPTEEDIEKNPELKKLQIYGAGPKMIGLGLKAKEKTVRKKDSIQPDKEEVTCPATVVVKGEASGFGKATSAFSDKNLNHSFESCTKMAMQLRNNHSSAQFMDSYICRICSRGDEDDRFLLCDGCNDNYHIFCLLPPLSEVPKGVWRCPKCILAECQRPPEAFGFEQATQEYTLQSFGEMADSFKTDYFNMPVHMVPTEVVEKEFWRLVSSIEEDVTVEYGADIHSKEFGSGFPVNNSKWNLSPEEKEYAASGWNLNVMPVLDQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEDVMKRLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPVGRQCIEHYRRLRRYCVFSHEELICKMAAFPEKLDLNLAVAVHKEMFIMVQEERRLRKTLLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALACYDCPDSLVCLSHINDLCKCSRSRQYLRYRYTLDELPAMLQKLKIRAESFDNWANKVQAALEVEDGRKRSFEELRALESEARDRRFPNSELLQRLKKCLTEAEACISQVLGLISNSEDRSQTPQITLTELQILLKQMGTLPCTMHQIDEVKDVLQQVETYQIETREALTSLPYSLEILKSLMEKGQQLRVEVPEAHQLEELLEQAQWLDQVKQALAPSGQRHSLVMMKKLLVMGTKVSSSPSVNKARAELQELLTVAECWEEKAHFCLEASQKHSPATLEVIIREAENIPVYLPNIQSLKEALTKAQAWIADVNEIQNGDHYPCLDDLEGLVAVGRDLPVELEELRQLENQVLTAHSWKEKASKTFLKKNSCYTLLEVLCPCADAGSVSTKRSRWIEKEMGLYKYDTELLGLSAQDLRDPGSVIMAFKEGEEKEKEGILHLRHINSAKPSPMSSSMNTSATSICVCGQVCAGVEALQCDLCHDWFHGQCVTVPHLLSSLRANHTSSQLLAWWEWNTKFLCPLCMRSRRPRLETILSLLVGLQRLSVRLPEGEALQCLTERAIGWQGRARQALASEDVTALLKQLAKSRQQLQDELRHEKPSTLPSGLASDCITEDSGKDTLKEEEELVLNEDRLKSSEKIVPKESSCKRDEELLPSLLSQLTGPVLELPEATRAPLEELMMEGDLLEVTLDENHSIWQLLQAGQNPNLERIHTLLELEKPENPGSSEQQIPERRRRRRQKVVLSRKGEDFIQKELESKRVRSSRIKPKEEKFQEPIHGDNVLLTHRTEHTDILKDHMNSVQEKDPSPSSSFPSLTPLLHLSYFHQQKLQQ
SIO_010081: LOC116096519
subclass of: SO_0000673
so part of: LOC116096519
location: join(273107..273256,274449..274526,277411..277533,277760..277930,278506..278640,286217..286355,286452..286615,290985..291143,293516..293635,293721..293879,306176..306357,306448..306610,309303..309422,309547..309741,310012..310193,310272..310396,310529..310676,316896..316992,318007..318365,320027..320165,320818..320997,321136..321273,321486..322082,322562..322643,322773..322972,323059..323403)
location: region:273107-323403:1
so has part: feature:273107-273256:1:exon
so has part: feature:274449-274526:1:exon
so has part: feature:277411-277533:1:exon
so has part: feature:277760-277930:1:exon
so has part: feature:278506-278640:1:exon
so has part: feature:286217-286355:1:exon
so has part: feature:286452-286615:1:exon
so has part: feature:290985-291143:1:exon
so has part: feature:293516-293635:1:exon
so has part: feature:293721-293879:1:exon
so has part: feature:306176-306357:1:exon
so has part: feature:306448-306610:1:exon
so has part: feature:309303-309422:1:exon
so has part: feature:309547-309741:1:exon
so has part: feature:310012-310193:1:exon
so has part: feature:310272-310396:1:exon
so has part: feature:310529-310676:1:exon
so has part: feature:316896-316992:1:exon
so has part: feature:318007-318365:1:exon
so has part: feature:320027-320165:1:exon
so has part: feature:320818-320997:1:exon
so has part: feature:321136-321273:1:exon
so has part: feature:321486-322082:1:exon
so has part: feature:322562-322643:1:exon
so has part: feature:322773-322972:1:exon
so has part: feature:323059-323403:1:exon

XP_031234279.1
type: Protein
SIO_000068: ncbiprotein

position:273107:1
position: 273107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323403:1
position: 323403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273107-273256:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:274449-274526:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:277411-277533:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:277760-277930:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:278506-278640:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:286217-286355:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:286452-286615:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:290985-291143:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:293516-293635:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:293721-293879:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:306176-306357:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:306448-306610:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:309303-309422:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:309547-309741:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:310012-310193:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:310272-310396:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:310529-310676:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:316896-316992:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:318007-318365:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:320027-320165:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:320818-320997:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:321136-321273:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:321486-322082:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:322562-322643:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:322773-322972:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:323059-323403:1:exon

LOC116096519
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35658
gene: LOC116096519
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine-specific demethylase 5D isoform X2
translation: MEEGGYEAICKDRRWARVAQRLNYPSGKNIGSLLRSHYERIIYPYEMFQSGANLVQCNTDPFDSEEKDKEYKPHSIPLRQSVQPSKFSCYNRRAKRLQPEPEPTEEDIEKNPELKKLQIYGAGPKMIGLGLKAKEKTVRKKDSIQPDKEEVTCPATVVVKGEASGFGKATSAFSDKNLNHSFESCTKMAMQLRNNHSSAQFMDSYICRICSRGDEDDRFLLCDGCNDNYHIFCLLPPLSEVPKGVWRCPKCILAECQRPPEAFGFEQATQEYTLQSFGEMADSFKTDYFNMPVHMVPTEVVEKEFWRLVSSIEEDVTVEYGADIHSKEFGSGFPVNNSKWNLSPEEKEYAASGWNLNVMPVLDQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEDVMKRLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPVGRQCIEHYRRLRRYCVFSHEELICKMAAFPEKLDLNLAVAVHKEMFIMVQEERRLRKTLLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALACYDCPDSLVCLSHINDLCKCSRSRQYLRYRYTLDELPAMLQKLKIRAESFDNWANKVQAALEVEDGRKRSFEELRALESEARDRRFPNSELLQRLKKCLTEAEACISQVLGLISNSEDRSQTPQITLTELQILLKQMGTLPCTMHQIDEVKDVLQQVETYQIETREALTSLPYSLEILKSLMEKGQQLRVEVPEAHQLEELLEQAQWLDQVKQALAPSGQRHSLVMMKKLLVMGTKVSSSPSVNKARAELQELLTVAECWEEKAHFCLEASQKHSPATLEVIIREAENIPVYLPNIQSLKEALTKAQAWIADVNEIQNGDHYPCLDDLEGLVAVGRDLPVELEELRQLENQVLTAHSWKEKASKTFLKKNSCYTLLEVLCPCADAGSVSTKRSRWIEKEMGLYKYDTELLGLSAQDLRDPGSVIMAFKEGEEKEKEGILHLRHINSAKPSPMSSSMNTSATSICVCGQVCAGVEALQCDLCHDWFHGQCVTVPHLLSSLRANHTSSQLLAWWEWNTKFLCPLCMRSRRPRLETILSLLVGLQRLSVRLPEGEALQCLTERAIGWQGRARQALASEDVTALLKQLAKSRQQLQDELRHEKPSTLPSGLASDCITEDSGKDTLKEEEELVLNEDRLKSSEKIVPKESSCKRDEELLPSLLSQLTGPVLELPEATRAPLEELMMEGDLLEVTLDENHSIWQLLQAGQNPNLERIHTLLELEKPENPGSSEQQIPERRRRRRQKVVLSRKGEDFIQKELESKRVRSSRIKPKEEKFQEPIHGDNVLLTHRTEHTDILKDHMNSVQEKDPSPSSSFPSLTPLLHLSYFHQQKLQQ
SIO_010081: LOC116096519
subclass of: SO_0000673
so part of: LOC116096519
location: join(277766..277930,278506..278640,286217..286355,286452..286615,290985..291143,293516..293635,293721..293879,306176..306357,306448..306610,309303..309422,309547..309741,310012..310193,310272..310396,310529..310676,316896..316992,318007..318365,320027..320165,320818..320997,321136..321273,321486..322082,322562..322643,322773..322972,323059..323403)
location: region:277766-323403:1
so has part: feature:277766-277930:1:exon
so has part: feature:278506-278640:1:exon
so has part: feature:286217-286355:1:exon
so has part: feature:286452-286615:1:exon
so has part: feature:290985-291143:1:exon
so has part: feature:293516-293635:1:exon
so has part: feature:293721-293879:1:exon
so has part: feature:306176-306357:1:exon
so has part: feature:306448-306610:1:exon
so has part: feature:309303-309422:1:exon
so has part: feature:309547-309741:1:exon
so has part: feature:310012-310193:1:exon
so has part: feature:310272-310396:1:exon
so has part: feature:310529-310676:1:exon
so has part: feature:316896-316992:1:exon
so has part: feature:318007-318365:1:exon
so has part: feature:320027-320165:1:exon
so has part: feature:320818-320997:1:exon
so has part: feature:321136-321273:1:exon
so has part: feature:321486-322082:1:exon
so has part: feature:322562-322643:1:exon
so has part: feature:322773-322972:1:exon
so has part: feature:323059-323403:1:exon

XP_031234290.1
type: Protein
SIO_000068: ncbiprotein

position:277766:1
position: 277766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277766-277930:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:278506-278640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:286217-286355:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:286452-286615:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:290985-291143:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:293516-293635:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:293721-293879:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:306176-306357:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:306448-306610:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:309303-309422:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:309547-309741:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:310012-310193:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:310272-310396:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:310529-310676:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:316896-316992:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:318007-318365:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:320027-320165:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:320818-320997:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:321136-321273:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:321486-322082:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:322562-322643:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:322773-322972:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:323059-323403:1:exon

LOC116096519
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35658
gene: LOC116096519
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine-specific demethylase 5D isoform X2
translation: MEEGGYEAICKDRRWARVAQRLNYPSGKNIGSLLRSHYERIIYPYEMFQSGANLVQCNTDPFDSEEKDKEYKPHSIPLRQSVQPSKFSCYNRRAKRLQPEPEPTEEDIEKNPELKKLQIYGAGPKMIGLGLKAKEKTVRKKDSIQPDKEEVTCPATVVVKGEASGFGKATSAFSDKNLNHSFESCTKMAMQLRNNHSSAQFMDSYICRICSRGDEDDRFLLCDGCNDNYHIFCLLPPLSEVPKGVWRCPKCILAECQRPPEAFGFEQATQEYTLQSFGEMADSFKTDYFNMPVHMVPTEVVEKEFWRLVSSIEEDVTVEYGADIHSKEFGSGFPVNNSKWNLSPEEKEYAASGWNLNVMPVLDQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEDVMKRLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPVGRQCIEHYRRLRRYCVFSHEELICKMAAFPEKLDLNLAVAVHKEMFIMVQEERRLRKTLLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALACYDCPDSLVCLSHINDLCKCSRSRQYLRYRYTLDELPAMLQKLKIRAESFDNWANKVQAALEVEDGRKRSFEELRALESEARDRRFPNSELLQRLKKCLTEAEACISQVLGLISNSEDRSQTPQITLTELQILLKQMGTLPCTMHQIDEVKDVLQQVETYQIETREALTSLPYSLEILKSLMEKGQQLRVEVPEAHQLEELLEQAQWLDQVKQALAPSGQRHSLVMMKKLLVMGTKVSSSPSVNKARAELQELLTVAECWEEKAHFCLEASQKHSPATLEVIIREAENIPVYLPNIQSLKEALTKAQAWIADVNEIQNGDHYPCLDDLEGLVAVGRDLPVELEELRQLENQVLTAHSWKEKASKTFLKKNSCYTLLEVLCPCADAGSVSTKRSRWIEKEMGLYKYDTELLGLSAQDLRDPGSVIMAFKEGEEKEKEGILHLRHINSAKPSPMSSSMNTSATSICVCGQVCAGVEALQCDLCHDWFHGQCVTVPHLLSSLRANHTSSQLLAWWEWNTKFLCPLCMRSRRPRLETILSLLVGLQRLSVRLPEGEALQCLTERAIGWQGRARQALASEDVTALLKQLAKSRQQLQDELRHEKPSTLPSGLASDCITEDSGKDTLKEEEELVLNEDRLKSSEKIVPKESSCKRDEELLPSLLSQLTGPVLELPEATRAPLEELMMEGDLLEVTLDENHSIWQLLQAGQNPNLERIHTLLELEKPENPGSSEQQIPERRRRRRQKVVLSRKGEDFIQKELESKRVRSSRIKPKEEKFQEPIHGDNVLLTHRTEHTDILKDHMNSVQEKDPSPSSSFPSLTPLLHLSYFHQQKLQQ
SIO_010081: LOC116096519
subclass of: SO_0000673
so part of: LOC116096519
location: join(277766..277930,278506..278640,286217..286355,286452..286615,290985..291143,293516..293635,293721..293879,306176..306357,306448..306610,309303..309422,309547..309741,310012..310193,310272..310396,310529..310676,316896..316992,318007..318365,320027..320165,320818..320997,321136..321273,321486..322082,322562..322643,322773..322972,323059..323403)
location: region:277766-323403:1
so has part: feature:277766-277930:1:exon
so has part: feature:278506-278640:1:exon
so has part: feature:286217-286355:1:exon
so has part: feature:286452-286615:1:exon
so has part: feature:290985-291143:1:exon
so has part: feature:293516-293635:1:exon
so has part: feature:293721-293879:1:exon
so has part: feature:306176-306357:1:exon
so has part: feature:306448-306610:1:exon
so has part: feature:309303-309422:1:exon
so has part: feature:309547-309741:1:exon
so has part: feature:310012-310193:1:exon
so has part: feature:310272-310396:1:exon
so has part: feature:310529-310676:1:exon
so has part: feature:316896-316992:1:exon
so has part: feature:318007-318365:1:exon
so has part: feature:320027-320165:1:exon
so has part: feature:320818-320997:1:exon
so has part: feature:321136-321273:1:exon
so has part: feature:321486-322082:1:exon
so has part: feature:322562-322643:1:exon
so has part: feature:322773-322972:1:exon
so has part: feature:323059-323403:1:exon

XP_031234299.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:277766-277930:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:278506-278640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:286217-286355:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:286452-286615:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:290985-291143:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:293516-293635:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:293721-293879:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:306176-306357:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:306448-306610:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:309303-309422:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:309547-309741:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:310012-310193:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:310272-310396:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:310529-310676:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:316896-316992:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:318007-318365:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:320027-320165:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:320818-320997:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:321136-321273:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:321486-322082:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:322562-322643:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:322773-322972:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:323059-323403:1:exon

LOC116096530
type: Gene
subclass of: SO_0000704
RO_0002162: 35658
gene: LOC116096530
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(362742..506897)
location: region:362742-506897:-1
so has part: feature:362742-506897:-1:exon
subclass of: SO_0000010

116096530
type: Gene
SIO_000068: ncbigene

position:362742:-1
position: 362742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:506897:-1
position: 506897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362742-506897:-1:exon

LOC116096530
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35658
gene: LOC116096530
product: probable ubiquitin carboxyl-terminal hydrolase FAF-X, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031378461.1
SIO_010081: LOC116096530
subclass of: SO_0000673
so part of: LOC116096530
location: complement(join(362742..362938,366132..366221,367217..367426,367567..367723,369796..369884,370013..370233,371252..371437,373339..373468,377785..378019,379408..379531,379932..380670,382331..382472,385873..386046,402771..402961,404477..404697,406708..406930,409943..410089,410916..411062,411244..411352,412404..412573,416315..416440,416598..416723,420289..420567,420777..420907,435223..435343,437839..437991,438657..438894,449452..449666,451259..451354,452160..452502,453261..453348,458516..458649,462398..462534,463992..464198,471496..471600,478551..478703,480616..480751,481100..481351,481557..481672,490724..490942,493257..493369,495167..495246,497580..497698,502060..502201,506627..506897))
location: region:362742-506897:-1
so has part: feature:506627-506897:-1:exon
so has part: feature:502060-502201:-1:exon
so has part: feature:497580-497698:-1:exon
so has part: feature:495167-495246:-1:exon
so has part: feature:493257-493369:-1:exon
so has part: feature:490724-490942:-1:exon
so has part: feature:481557-481672:-1:exon
so has part: feature:481100-481351:-1:exon
so has part: feature:480616-480751:-1:exon
so has part: feature:478551-478703:-1:exon
so has part: feature:471496-471600:-1:exon
so has part: feature:463992-464198:-1:exon
so has part: feature:462398-462534:-1:exon
so has part: feature:458516-458649:-1:exon
so has part: feature:453261-453348:-1:exon
so has part: feature:452160-452502:-1:exon
so has part: feature:451259-451354:-1:exon
so has part: feature:449452-449666:-1:exon
so has part: feature:438657-438894:-1:exon
so has part: feature:437839-437991:-1:exon
so has part: feature:435223-435343:-1:exon
so has part: feature:420777-420907:-1:exon
so has part: feature:420289-420567:-1:exon
so has part: feature:416598-416723:-1:exon
so has part: feature:416315-416440:-1:exon
so has part: feature:412404-412573:-1:exon
so has part: feature:411244-411352:-1:exon
so has part: feature:410916-411062:-1:exon
so has part: feature:409943-410089:-1:exon
so has part: feature:406708-406930:-1:exon
so has part: feature:404477-404697:-1:exon
so has part: feature:402771-402961:-1:exon
so has part: feature:385873-386046:-1:exon
so has part: feature:382331-382472:-1:exon
so has part: feature:379932-380670:-1:exon
so has part: feature:379408-379531:-1:exon
so has part: feature:377785-378019:-1:exon
so has part: feature:373339-373468:-1:exon
so has part: feature:371252-371437:-1:exon
so has part: feature:370013-370233:-1:exon
so has part: feature:369796-369884:-1:exon
so has part: feature:367567-367723:-1:exon
so has part: feature:367217-367426:-1:exon
so has part: feature:366132-366221:-1:exon
so has part: feature:362742-362938:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:506627-506897:-1:exon

position:506627:-1
position: 506627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:502060-502201:-1:exon

position:502060:-1
position: 502060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502201:-1
position: 502201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:497580-497698:-1:exon

position:497580:-1
position: 497580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:497698:-1
position: 497698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:495167-495246:-1:exon

position:495167:-1
position: 495167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:495246:-1
position: 495246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:493257-493369:-1:exon

position:493257:-1
position: 493257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:493369:-1
position: 493369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:490724-490942:-1:exon

position:490724:-1
position: 490724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:490942:-1
position: 490942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:481557-481672:-1:exon

position:481557:-1
position: 481557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481672:-1
position: 481672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:481100-481351:-1:exon

position:481100:-1
position: 481100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481351:-1
position: 481351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:480616-480751:-1:exon

position:480616:-1
position: 480616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:480751:-1
position: 480751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:478551-478703:-1:exon

position:478551:-1
position: 478551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:478703:-1
position: 478703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:471496-471600:-1:exon

position:471496:-1
position: 471496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471600:-1
position: 471600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:463992-464198:-1:exon

position:463992:-1
position: 463992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464198:-1
position: 464198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:462398-462534:-1:exon

position:462398:-1
position: 462398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462534:-1
position: 462534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:458516-458649:-1:exon

position:458516:-1
position: 458516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458649:-1
position: 458649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:453261-453348:-1:exon

position:453261:-1
position: 453261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:453348:-1
position: 453348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:452160-452502:-1:exon

position:452160:-1
position: 452160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:452502:-1
position: 452502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:451259-451354:-1:exon

position:451259:-1
position: 451259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451354:-1
position: 451354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:449452-449666:-1:exon

position:449452:-1
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position:449666:-1
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urn:…
SIO_000300: 19
SIO_000628: feature:438657-438894:-1:exon

position:438657:-1
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reference: sequence
type: ReverseStrandPosition
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position:438894:-1
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reference: sequence
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urn:…
SIO_000300: 20
SIO_000628: feature:437839-437991:-1:exon

position:437839:-1
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reference: sequence
type: ReverseStrandPosition
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position:437991:-1
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reference: sequence
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urn:…
SIO_000300: 21
SIO_000628: feature:435223-435343:-1:exon

position:435223:-1
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reference: sequence
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position:435343:-1
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reference: sequence
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urn:…
SIO_000300: 22
SIO_000628: feature:420777-420907:-1:exon

position:420777:-1
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reference: sequence
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position:420907:-1
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urn:…
SIO_000300: 23
SIO_000628: feature:420289-420567:-1:exon

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reference: sequence
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position:420567:-1
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urn:…
SIO_000300: 24
SIO_000628: feature:416598-416723:-1:exon

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position:416723:-1
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urn:…
SIO_000300: 25
SIO_000628: feature:416315-416440:-1:exon

position:416315:-1
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position:416440:-1
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reference: sequence
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urn:…
SIO_000300: 26
SIO_000628: feature:412404-412573:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:412573:-1
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reference: sequence
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urn:…
SIO_000300: 27
SIO_000628: feature:411244-411352:-1:exon

position:411244:-1
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reference: sequence
type: ReverseStrandPosition
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position:411352:-1
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reference: sequence
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urn:…
SIO_000300: 28
SIO_000628: feature:410916-411062:-1:exon

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position:411062:-1
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reference: sequence
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urn:…
SIO_000300: 29
SIO_000628: feature:409943-410089:-1:exon

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reference: sequence
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position:410089:-1
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reference: sequence
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urn:…
SIO_000300: 30
SIO_000628: feature:406708-406930:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:406930:-1
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reference: sequence
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urn:…
SIO_000300: 31
SIO_000628: feature:404477-404697:-1:exon

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reference: sequence
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position:404697:-1
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reference: sequence
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urn:…
SIO_000300: 32
SIO_000628: feature:402771-402961:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:402961:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:385873-386046:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:386046:-1
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reference: sequence
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urn:…
SIO_000300: 34
SIO_000628: feature:382331-382472:-1:exon

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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382472:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:379932-380670:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:380670:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 36
SIO_000628: feature:379408-379531:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:379531:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 37
SIO_000628: feature:377785-378019:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:378019:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:373339-373468:-1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 39
SIO_000628: feature:371252-371437:-1:exon

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reference: sequence
type: ReverseStrandPosition
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reference: sequence
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urn:…
SIO_000300: 40
SIO_000628: feature:370013-370233:-1:exon

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reference: sequence
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position: 370233
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 41
SIO_000628: feature:369796-369884:-1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 42
SIO_000628: feature:367567-367723:-1:exon

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position: 367567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367723:-1
position: 367723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:367217-367426:-1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 44
SIO_000628: feature:366132-366221:-1:exon

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reference: sequence
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:362742-362938:-1:exon

position:362938:-1
position: 362938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116096530
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35658
gene: LOC116096530
product: probable ubiquitin carboxyl-terminal hydrolase FAF-X, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031378452.1
SIO_010081: LOC116096530
subclass of: SO_0000673
so part of: LOC116096530
location: complement(join(362742..362938,366132..366221,367217..367426,367567..367723,369796..369884,370013..370233,371252..371437,373339..373468,377785..378019,379408..379531,379932..380670,382331..382472,385873..386046,402771..402961,404477..404697,406708..406930,409943..410089,410916..411062,411244..411352,412404..412573,416315..416440,416598..416723,420289..420567,420777..420907,435223..435343,437839..437991,438657..438894,449452..449666,451259..451354,452160..452502,453261..453348,458516..458649,462398..462534,463992..464198,471496..471600,478551..478703,480616..480751,481100..481351,481557..481672,490724..490942,493257..493369,495167..495246,497580..497725,502060..502201,506627..506897))
location: region:362742-506897:-1
so has part: feature:506627-506897:-1:exon
so has part: feature:502060-502201:-1:exon
so has part: feature:497580-497725:-1:exon
so has part: feature:495167-495246:-1:exon
so has part: feature:493257-493369:-1:exon
so has part: feature:490724-490942:-1:exon
so has part: feature:481557-481672:-1:exon
so has part: feature:481100-481351:-1:exon
so has part: feature:480616-480751:-1:exon
so has part: feature:478551-478703:-1:exon
so has part: feature:471496-471600:-1:exon
so has part: feature:463992-464198:-1:exon
so has part: feature:462398-462534:-1:exon
so has part: feature:458516-458649:-1:exon
so has part: feature:453261-453348:-1:exon
so has part: feature:452160-452502:-1:exon
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so has part: feature:449452-449666:-1:exon
so has part: feature:438657-438894:-1:exon
so has part: feature:437839-437991:-1:exon
so has part: feature:435223-435343:-1:exon
so has part: feature:420777-420907:-1:exon
so has part: feature:420289-420567:-1:exon
so has part: feature:416598-416723:-1:exon
so has part: feature:416315-416440:-1:exon
so has part: feature:412404-412573:-1:exon
so has part: feature:411244-411352:-1:exon
so has part: feature:410916-411062:-1:exon
so has part: feature:409943-410089:-1:exon
so has part: feature:406708-406930:-1:exon
so has part: feature:404477-404697:-1:exon
so has part: feature:402771-402961:-1:exon
so has part: feature:385873-386046:-1:exon
so has part: feature:382331-382472:-1:exon
so has part: feature:379932-380670:-1:exon
so has part: feature:379408-379531:-1:exon
so has part: feature:377785-378019:-1:exon
so has part: feature:373339-373468:-1:exon
so has part: feature:371252-371437:-1:exon
so has part: feature:370013-370233:-1:exon
so has part: feature:369796-369884:-1:exon
so has part: feature:367567-367723:-1:exon
so has part: feature:367217-367426:-1:exon
so has part: feature:366132-366221:-1:exon
so has part: feature:362742-362938:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:506627-506897:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:502060-502201:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:497580-497725:-1:exon

position:497725:-1
position: 497725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:495167-495246:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:493257-493369:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:490724-490942:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:481557-481672:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:481100-481351:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:480616-480751:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:478551-478703:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:471496-471600:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:463992-464198:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:462398-462534:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:458516-458649:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:453261-453348:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:452160-452502:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:451259-451354:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:449452-449666:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:438657-438894:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:437839-437991:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:435223-435343:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:420777-420907:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:420289-420567:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:416598-416723:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:416315-416440:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:412404-412573:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:411244-411352:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:410916-411062:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:409943-410089:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:406708-406930:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:404477-404697:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:402771-402961:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:385873-386046:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:382331-382472:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:379932-380670:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:379408-379531:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:377785-378019:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:373339-373468:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:371252-371437:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:370013-370233:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:369796-369884:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:367567-367723:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:367217-367426:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:366132-366221:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:362742-362938:-1:exon

LOC116096530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35658
gene: LOC116096530
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X2
translation: MTITTRGSPVGENESQGQAPDGQLQASFQQNQNSPATPPDEQGQGDAPPQHEEEDPSFPHADLAKLDDMINRPRWVVPVLPKGELEVLLEASLDLTKKGLDTKSEACQRFFRDVLTVTFTKILMDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPFLELLAIALNPHCKFHVYNGARPCESVSSSVQFPEDELFACSPDLCSPKGWLVDLINTFGTLNGFQILHDRFTSGSALNIQTIAALIKPFGQCYEFLTQYTLKKYFIPVIEVVPQLLQKLTNEELKKEAKTEVKNDAISMIIKFLKNLASRIPGQEETVKNLEIFRLKMILRLLQLSSFNGKMNALNEINKVLSSVSYYTHRHGNSEEEWLTAEQMAEWIQQNNILTIVLQDSLHQPQYVEKLEKIIRFVIKEKTLTLQDLNNIWAAQAGKHEAIVKNVHDLLTKLAWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDLALNAHIKILDYSCSQDRDTQKIQWIECFIEEFQTNNKWVIPALKQIKEICSLFGEAPQNSSQTHRSPHVFYRHDLISQLQHNYALVTLVAENLATYMNNIRLYAKDHEDYDPQTIRLGSRYSHVQEVQERLNFLRFLLKDGQLWLCASQAKQIWNCLAENAVYFSDREACFMWYSKLMGDEPDLDPDINKEFFESNVLQLDPSLLTENGIKCFERFFKTVNCREGKLMIKRKVYMMDDLDLIGLDYLWKVVIQSNDNISSRAIDLLKEIYTSLGPRLQANQVVIHEDFIQSCFDRLKASYDMLHILDSDKDNIFSCARHEAIRMVRILTVLREYIIECDSDYHEERMILPMSRAFRGKHLSLTVRFPNQGEVEDLDILSHTNATIGSVRRCILNHLNASVSHTKIELFIGGELLDSEDDRKLVEQLNLKDKSLITAKFIQINSNMPSSPDSSSDSSAGSPGNHSHNNYRDVPNPEMEKCLPGVIMSLQPKYISFLWQVADLGSMLTMPTLRDGARILMKLMPPDSTTIEKLRAVCSDHLNLGERRLGQSLHSLFFGSSASQVLYLTEVVYTLLMPAGAPLADISSDFQYHFLKSGGLPLVLSMLIQNNFLPNTDVETLRDAYFSTLKIAKLLLTTIGYGYVQAIAEACQPVADGTDPKTPINQLTHDQAVVLQNALQSIPNPSSECMLRNVSIRLAQQISGLASRYIPDICVIRAIQKIIWASGCGSLELVFRPNEDITETYKMTTSTRSNPEVKDEQVCCEALEVMTLCFALIPTAMDSLSKEKTWQMFVIDLLLYCPSETIRQLAQEQFFLMCTRCCMGHRPLVFFITLLFTILRGTATEKGKHSDVYFTLLRRLLTYAYNSNIHVPNVDVLLNDEIDWLKRARDYIKNTGETNVEDTILEGHLGVTKELLSFQTPEKKYHVGCKTGGANLVKELIDDFIFPASKAYLQYMRSGELPTKQAIPVCSSPAIVNAGFELLVALAFGCVRNLKQIVNCLTELFYIGTPVTTCEALAEWEYLPPVGPRPPKGFVGLKNAGATCYMNSVIQQLYMIPSIRNSILAIESIWLDTDDDIFKDEKQDSENNVDPRDYVFEYPHQFEDKPTLSKVEDRKEYNIGVLKHLQITFGHLAASQLQYYVPRGFWQQFRLWGEPVNLREQHDALEFFNSLVDSLDEAFKALGHPAVLSKVLGGSFADQKICQGCPHQYECEESFTTLNIDIRNHQNLLDSLEQYIKGDLLEGANAYHCEKCDKKVDTVKRLLIKKLPSVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGATKLEDDSVNPQTQLIKQNEQSVIPGSTKYRLVGVLVHSGQANGGHYYSYIIQRNGKDSKTGRWFKFDDGDVTECKMDDDEEMKNQCFGGEYMGEVFDHMMKRISYKRQKRWWNAYILFYERMDITEDDEMITYASELTITRPHQIMSPAIERSVWKQNVQFLHNQMQFSLEYFQFI…
SIO_010081: LOC116096530
subclass of: SO_0000673
so part of: LOC116096530
location: complement(join(362807..362938,366132..366221,367217..367426,367567..367723,369796..369884,370013..370233,371252..371437,373339..373468,377785..378019,379408..379531,379932..380670,382331..382472,385873..386046,402771..402961,404477..404697,406708..406930,409943..410089,410916..411062,411244..411352,412404..412573,416315..416440,416598..416723,420289..420567,420777..420907,435223..435343,437839..437991,438657..438894,449452..449666,451259..451354,452160..452502,453261..453348,458516..458649,462398..462534,463992..464198,471496..471600,478551..478703,480616..480751,481100..481351,481557..481672,490724..490942,493257..493369,495167..495246,497580..497698,502060..502155))
location: region:362807-502155:-1
so has part: feature:502060-502155:-1:exon
so has part: feature:497580-497698:-1:exon
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so has part: feature:420777-420907:-1:exon
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so has part: feature:416315-416440:-1:exon
so has part: feature:412404-412573:-1:exon
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so has part: feature:406708-406930:-1:exon
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so has part: feature:385873-386046:-1:exon
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so has part: feature:379932-380670:-1:exon
so has part: feature:379408-379531:-1:exon
so has part: feature:377785-378019:-1:exon
so has part: feature:373339-373468:-1:exon
so has part: feature:371252-371437:-1:exon
so has part: feature:370013-370233:-1:exon
so has part: feature:369796-369884:-1:exon
so has part: feature:367567-367723:-1:exon
so has part: feature:367217-367426:-1:exon
so has part: feature:366132-366221:-1:exon
so has part: feature:362807-362938:-1:exon

XP_031234321.1
type: Protein
SIO_000068: ncbiprotein

position:362807:-1
position: 362807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502155:-1
position: 502155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:502060-502155:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:497580-497698:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:495167-495246:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:493257-493369:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:490724-490942:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:481557-481672:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:481100-481351:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:480616-480751:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:478551-478703:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:471496-471600:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:463992-464198:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:462398-462534:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:458516-458649:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:453261-453348:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:452160-452502:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:451259-451354:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:449452-449666:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:438657-438894:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:437839-437991:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:435223-435343:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:420777-420907:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:420289-420567:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:416598-416723:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:416315-416440:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:412404-412573:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:411244-411352:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:410916-411062:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:409943-410089:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:406708-406930:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:404477-404697:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:402771-402961:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:385873-386046:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:382331-382472:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:379932-380670:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:379408-379531:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:377785-378019:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:373339-373468:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:371252-371437:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:370013-370233:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:369796-369884:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:367567-367723:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:367217-367426:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:366132-366221:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:362807-362938:-1:exon

LOC116096530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35658
gene: LOC116096530
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
translation: MTITTRGSPVGENESQGQAPDGQLQASFQQNQISSSDSSNENSPATPPDEQGQGDAPPQHEEEDPSFPHADLAKLDDMINRPRWVVPVLPKGELEVLLEASLDLTKKGLDTKSEACQRFFRDVLTVTFTKILMDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPFLELLAIALNPHCKFHVYNGARPCESVSSSVQFPEDELFACSPDLCSPKGWLVDLINTFGTLNGFQILHDRFTSGSALNIQTIAALIKPFGQCYEFLTQYTLKKYFIPVIEVVPQLLQKLTNEELKKEAKTEVKNDAISMIIKFLKNLASRIPGQEETVKNLEIFRLKMILRLLQLSSFNGKMNALNEINKVLSSVSYYTHRHGNSEEEWLTAEQMAEWIQQNNILTIVLQDSLHQPQYVEKLEKIIRFVIKEKTLTLQDLNNIWAAQAGKHEAIVKNVHDLLTKLAWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDLALNAHIKILDYSCSQDRDTQKIQWIECFIEEFQTNNKWVIPALKQIKEICSLFGEAPQNSSQTHRSPHVFYRHDLISQLQHNYALVTLVAENLATYMNNIRLYAKDHEDYDPQTIRLGSRYSHVQEVQERLNFLRFLLKDGQLWLCASQAKQIWNCLAENAVYFSDREACFMWYSKLMGDEPDLDPDINKEFFESNVLQLDPSLLTENGIKCFERFFKTVNCREGKLMIKRKVYMMDDLDLIGLDYLWKVVIQSNDNISSRAIDLLKEIYTSLGPRLQANQVVIHEDFIQSCFDRLKASYDMLHILDSDKDNIFSCARHEAIRMVRILTVLREYIIECDSDYHEERMILPMSRAFRGKHLSLTVRFPNQGEVEDLDILSHTNATIGSVRRCILNHLNASVSHTKIELFIGGELLDSEDDRKLVEQLNLKDKSLITAKFIQINSNMPSSPDSSSDSSAGSPGNHSHNNYRDVPNPEMEKCLPGVIMSLQPKYISFLWQVADLGSMLTMPTLRDGARILMKLMPPDSTTIEKLRAVCSDHLNLGERRLGQSLHSLFFGSSASQVLYLTEVVYTLLMPAGAPLADISSDFQYHFLKSGGLPLVLSMLIQNNFLPNTDVETLRDAYFSTLKIAKLLLTTIGYGYVQAIAEACQPVADGTDPKTPINQLTHDQAVVLQNALQSIPNPSSECMLRNVSIRLAQQISGLASRYIPDICVIRAIQKIIWASGCGSLELVFRPNEDITETYKMTTSTRSNPEVKDEQVCCEALEVMTLCFALIPTAMDSLSKEKTWQMFVIDLLLYCPSETIRQLAQEQFFLMCTRCCMGHRPLVFFITLLFTILRGTATEKGKHSDVYFTLLRRLLTYAYNSNIHVPNVDVLLNDEIDWLKRARDYIKNTGETNVEDTILEGHLGVTKELLSFQTPEKKYHVGCKTGGANLVKELIDDFIFPASKAYLQYMRSGELPTKQAIPVCSSPAIVNAGFELLVALAFGCVRNLKQIVNCLTELFYIGTPVTTCEALAEWEYLPPVGPRPPKGFVGLKNAGATCYMNSVIQQLYMIPSIRNSILAIESIWLDTDDDIFKDEKQDSENNVDPRDYVFEYPHQFEDKPTLSKVEDRKEYNIGVLKHLQITFGHLAASQLQYYVPRGFWQQFRLWGEPVNLREQHDALEFFNSLVDSLDEAFKALGHPAVLSKVLGGSFADQKICQGCPHQYECEESFTTLNIDIRNHQNLLDSLEQYIKGDLLEGANAYHCEKCDKKVDTVKRLLIKKLPSVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGATKLEDDSVNPQTQLIKQNEQSVIPGSTKYRLVGVLVHSGQANGGHYYSYIIQRNGKDSKTGRWFKFDDGDVTECKMDDDEEMKNQCFGGEYMGEVFDHMMKRISYKRQKRWWNAYILFYERMDITEDDEMITYASELTITRPHQIMSPAIERSVWKQNVQFLHNQMQ…
SIO_010081: LOC116096530
subclass of: SO_0000673
so part of: LOC116096530
location: complement(join(362807..362938,366132..366221,367217..367426,367567..367723,369796..369884,370013..370233,371252..371437,373339..373468,377785..378019,379408..379531,379932..380670,382331..382472,385873..386046,402771..402961,404477..404697,406708..406930,409943..410089,410916..411062,411244..411352,412404..412573,416315..416440,416598..416723,420289..420567,420777..420907,435223..435343,437839..437991,438657..438894,449452..449666,451259..451354,452160..452502,453261..453348,458516..458649,462398..462534,463992..464198,471496..471600,478551..478703,480616..480751,481100..481351,481557..481672,490724..490942,493257..493369,495167..495246,497580..497725,502060..502155))
location: region:362807-502155:-1
so has part: feature:502060-502155:-1:exon
so has part: feature:497580-497725:-1:exon
so has part: feature:495167-495246:-1:exon
so has part: feature:493257-493369:-1:exon
so has part: feature:490724-490942:-1:exon
so has part: feature:481557-481672:-1:exon
so has part: feature:481100-481351:-1:exon
so has part: feature:480616-480751:-1:exon
so has part: feature:478551-478703:-1:exon
so has part: feature:471496-471600:-1:exon
so has part: feature:463992-464198:-1:exon
so has part: feature:462398-462534:-1:exon
so has part: feature:458516-458649:-1:exon
so has part: feature:453261-453348:-1:exon
so has part: feature:452160-452502:-1:exon
so has part: feature:451259-451354:-1:exon
so has part: feature:449452-449666:-1:exon
so has part: feature:438657-438894:-1:exon
so has part: feature:437839-437991:-1:exon
so has part: feature:435223-435343:-1:exon
so has part: feature:420777-420907:-1:exon
so has part: feature:420289-420567:-1:exon
so has part: feature:416598-416723:-1:exon
so has part: feature:416315-416440:-1:exon
so has part: feature:412404-412573:-1:exon
so has part: feature:411244-411352:-1:exon
so has part: feature:410916-411062:-1:exon
so has part: feature:409943-410089:-1:exon
so has part: feature:406708-406930:-1:exon
so has part: feature:404477-404697:-1:exon
so has part: feature:402771-402961:-1:exon
so has part: feature:385873-386046:-1:exon
so has part: feature:382331-382472:-1:exon
so has part: feature:379932-380670:-1:exon
so has part: feature:379408-379531:-1:exon
so has part: feature:377785-378019:-1:exon
so has part: feature:373339-373468:-1:exon
so has part: feature:371252-371437:-1:exon
so has part: feature:370013-370233:-1:exon
so has part: feature:369796-369884:-1:exon
so has part: feature:367567-367723:-1:exon
so has part: feature:367217-367426:-1:exon
so has part: feature:366132-366221:-1:exon
so has part: feature:362807-362938:-1:exon

XP_031234312.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:502060-502155:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:497580-497725:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:495167-495246:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:493257-493369:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:490724-490942:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:481557-481672:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:481100-481351:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:480616-480751:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:478551-478703:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:471496-471600:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:463992-464198:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:462398-462534:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:458516-458649:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:453261-453348:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:452160-452502:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:451259-451354:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:449452-449666:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:438657-438894:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:437839-437991:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:435223-435343:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:420777-420907:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:420289-420567:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:416598-416723:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:416315-416440:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:412404-412573:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:411244-411352:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:410916-411062:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:409943-410089:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:406708-406930:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:404477-404697:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:402771-402961:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:385873-386046:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:382331-382472:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:379932-380670:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:379408-379531:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:377785-378019:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:373339-373468:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:371252-371437:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:370013-370233:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:369796-369884:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:367567-367723:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:367217-367426:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:366132-366221:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:362807-362938:-1:exon

LOC116096547
type: Gene
subclass of: SO_0000704
RO_0002162: 35658
gene: LOC116096547
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(370449..370550)
location: region:370449-370550:-1
so has part: feature:370449-370550:-1:exon
subclass of: SO_0000623

116096547
type: Gene
SIO_000068: ncbigene

position:370449:-1
position: 370449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370550:-1
position: 370550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:370449-370550:-1:exon

LOC116096547
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 35658
nc RNA class: snRNA
gene: LOC116096547
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004121036.1
SIO_010081: LOC116096547
subclass of: SO_0000673
so part of: LOC116096547
location: complement(370449..370550)
location: region:370449-370550:-1
so has part: feature:370449-370550:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:370449-370550:-1:exon

LOC116096544
type: Gene
subclass of: SO_0000704
RO_0002162: 35658
gene: LOC116096544
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 440412..440487
location: region:440412-440487:1
so has part: feature:440412-440487:1:exon

116096544
type: Gene
SIO_000068: ncbigene

position:440412:1
position: 440412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440487:1
position: 440487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440412-440487:1:exon

LOC116096544
type: Exon
subclass of: SO_0000147
RO_0002162: 35658
gene: LOC116096544
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00012
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC116096544
subclass of: SO_0000673
so part of: LOC116096544
location: 440412..440487
location: region:440412-440487:1
so has part: feature:440412-440487:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:440412-440487:1:exon