Cryptosporidium parvum Iowa II chromosome 3, whole genome shotgun sequence.
Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Cryptosporidiidae; Cryptosporidium.
Complete genome sequence of the apicomplexan, Cryptosporidium parvum
Submitted (06-MAR-2007) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (02-APR-2004) Veterinary Pathobiology, University of Minnesota, 1988 Fitch Ave., St. Paul, MN 55108, USA
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence was derived from CM000431.
with a signal peptide and low complexity repeats, member of cryptosporidium SKSR gene family, telomeric localized gene
hypothetical protein containing a signal peptide
hypothetical protein with 11 transmembrane domains
with C-terminal region conserved in plasmodium
hypothetical protein with signal peptide
DRG like OBG family GTpase fused to an RNA binding domain TGS domain, Fun11p
transmembrane domain within N-terminus, no plasmodium orthologs
domain KOG1666, V-SNARE (intracellular trafficking, secretion, and vesicular transport)
latent transforming growth factor beta binding protein like (3F865)
zfwd1 protein, CCCH like RNA binding domain fused to WD repeats
protein serine/threonine phosphatase alpha
mRNA translation inhibitor SKI2 SFII helicase, DEXDc+HELICc
rasputin. nuclear transport factor 2 (NTF2) domain plus RRM domain
hypothetical protein with signal peptide and 5 transmembrane domains
Pop2p-like 3'5' exonuclease, CCR4-NOT transcription complex
putative ABC transporter, 12x transmembrane domains plus 2x AAA
ABC transporter, 12x transmembrane domains plus 2x AAA
VPS13p like protein involved in vacuolar sorting
C-type lectin containing protein with a transmembrane domain and mucin-like rich regions
Ctl1p-like mRNA capping enzyme beta subunit (polynucleotide 5'-triphosphatase)
hypothetical protein with 10 transmembrane domains
hypothetical protein with a signal peptide
putative fucose translocator with 8 transmembrane domains, within locus of 3 paralogous genes
fucose translocator with 8 transmembrane domains, within locus of 3 paralogous genes
putative fucose translocatorw ith 8 transmembrane domains, within locus of 3 paralogous genes
fucose translocatorw ith 8 transmembrane domains, within locus of 3 paralogous genes
cysteine-rich extracellular protein with a signal peptide and two apple domains
large hypothetical protein with signal peptide
hypothetical protein with a signal peptide plus transmembrane domain near C-terminus
hypothetical protein with 4 transmembrane domains, possible unusual phyletic distribution
hypothetical protein with possible 4 transmembrane domains
with signal peptide, similar to glutathione S-transferase; transcripts identified by EST
cathepsin like thiol protease possibly membrane associated, putative
cathepsin like thiol protease possibly membrane associated
very large probable mucin, 11700 aa long protein with signal peptide and pronounced Thr repeat (308 aa long)
hypothetical protein with 7 transmembrane domains
HMG-like nuclear protein, Nhp2p, pelota RNA binding domain containing protein
ULP1 like protease with a chlamydin like cysteine protease domain
POP4 like ribonuclease P protein subunit
calmodulin-domain protein kinase 1, putative
hypothetical protein, possible 2 transmembrane domains
hypothetical protein with 3 transmembrane domains within C-terminus
Rrp9p/U3-55K-family snoRNP-associated protein with several WD40 repeats
P-type ATpase fused to two adenyl cyclase domains and 21 predicted transmembrane regions
SNAPc like transcription factor with 4 MYB/SANT domains
with a signal peptide, within locus of cryptosporidium paralogs
hypothetical protein having a signal peptide, conserved region, and three or more transmembrane domains
hypothetical protein having a signal peptide
NMD3p like protein involved in nonsense mediated decay
hypothetical protein, transmembrane domain or GPI anchor at C-terminus
pyrophosphate-dependent 6-phosphofructokinase
U1 small nuclear ribonucleoprotein c like finger
pp2c; protein phosphatase 2 C, possible transmembrane domain near N-terminus
hypothetical protein with transmembrane or GPI anchor sequence at carboxy terminus
large protein with signal peptide. cysteine-rich, threonine-rich, possible mucin
apicomplexan specific region near N-terminus
alpha glucosidase-like faimly 31 glycosyl hydrolases
Spb4p, eIF4a-1-family RNA SFII helicase, DEXDc+HELICc domains
hypothetical protein with 4 transmembrane domains
protein containing a possible START(Steroidogenic acute regulatory (STAR) related lipid transfer) domain
eIF2G GTpase. eukaryotic translation initiation factor 2 gamma subunit (ZnR+GTpase)
putative non-coding RNA gene since there are no long ORFs but nine ESTs align on it; the nine ESTs are GenBank Accession Numbers AA420940, AA397487, AA532310, AA532330, AA555348, AA555353, AA555358, AA555334, and AA532337. Experiment evidence is needed to validate the annotation.
within locus of cryptosporidium paralogs
hypothetical protein with signal peptide and 2 transmembrane domains
similar to CAS/CSE proteins involved in chromosome segregation, and importins
hypothetical protein with 12 transmembrane domains
putative casein kinase II regulatory subunit; besthit Pf 23508244
casein kinase II regulatory subunit; besthit Pf 23508244
extracellular protein with a signal peptide and 9 EGF domains
membrane bound phosphatase with 3 transmembrane domains and a dual specificity phosphatase
protein with 2 transmembrane domains near N-terminus, possible ArgA, N-acetylglutamate synthase and related acetyltransferase, camello or GNAT
within N-terminal region, similar to snurportin, m3G-cap-specific nuclear import receptor
possible PRP38 pre-mRNA splicing factor family member
similar to translationally controlled tumor protein; transcripts identified by EST
BIS(5'-nucleosyl)-tetraphosphatase (diadenosine tetraphosphatase), putative
BIS(5'-nucleosyl)-tetraphosphatase (diadenosine tetraphosphatase)
putative prolyl 4-hydroxylase alpha subunit homolog, 2-oxoglutarate-dependent dioxygenase
prolyl 4-hydroxylase alpha subunit homolog, 2-oxoglutarate-dependent dioxygenase
large protein with 8 or more transmembrane domains within NH2 region
phosphatidylserine decarboxylase, putative
nucleolar protein NOP5/NOP58-like pre-mRNA splicinig factor prp31
myosin fused to 3 IQ motifs (that interact with calmodulin) and Rcc1 domain
protein phosphatase, signal peptide, 2-6 transmembrane domain protein
ubiquitin domain containing protein with a UBA domain at the C-terminus
proteasome subunit alpha type 3, NTN hydrolase fold
100 aa region highly conserved similar to uncharacterized expressed protein
domain similar to UMP1, proteasome maturation factor UMP1
hypothetical protein with transmembrane domain within C- terminus
possible RAB geranylgeranyl transferase, b subunit1, pernyltransferase
putative nucleoporin, FG-rich motifs within N-terminal region
nucleoporin, FG-rich motifs within N-terminal region
proliferation-associated protein 2G4 metalloprotease, creatinase/aminopeptidase fold
ubiquitin-fusion degadation-2 (UFD2) family protein with a UBOX at the C-terminus
ribosomal protein S18A, rps18ap, HhH domain
UbiA prenyltransferase family member (3I27), putative
UbiA prenyltransferase family member (3I27)
hypothetical protein with transmembrane region near N-terminus
with 4 TPR domains, similar to cdc proteins
PUP1/proteasome subunit beta type 7, NTN hydrolase fold
hypothetical protein with carboxy terminus motif shared with DNA-directed RNA polymerase subunit and TFIIS
putative DNA-directed RNA polymerase,possible RNA polymerase A/beta'/A'' subunit, long PHYSPTS repeat at C-terminus
DNA-directed RNA polymerase,possible RNA polymerase A/beta'/A'' subunit, long PHYSPTS repeat
hypothetical protein with conserved domain
protein with UBC domain, ubiquitin conjugating enzyme E2
possible signal peptidase subunit, signal peptide
DNAj domain, possible transmembrane domain
Trafficking protein particle complex subunit 6B, putative
Trafficking protein particle complex subunit 6B
protein with 10 transmembrane domains, possible calcium transporting ATpase or aminophospholipid transporter
hypothetical protein with transmembrane domain at carboxy terminus
FmRP interacting protein like, contains 2 C2H2 zinc fingers involved in RNA metabolism
similarity of possible bacterial origin within discrete region similar to long-chain fatty acid acyl-CoA synthetases
U2 small nuclear ribonucleoprotein A' like LRR repeats
possible mitochondrial import inner membrane, translocase subunit TIM44
probable phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthase, 2x SMART_PLDc domains, possible bacterial origin
ribosomal RNA assembly protein mis3/dribble/Krr1p. KH domain
hypothetical protein with possible plasmodium ortholog and cryptosporidium paralog
conserved COOH terminal-specific cysteine rich domain
hypothetical protein with signal peptide and 7 transmembrane domains
possible guaning nucleotide exchange factor, eIF-2B
protein kinase, cAMP-dependent, catalytic chain
12 transmembrane domain protein MFS family sugar transporter
transcription factor TFIIH with a vWA domain
AOX1,alternative oxidase, possible fungal or bacterial origin, 2 transmembrane regions
possible relation to actin related protein 2/3 (Arp2/3) complex subunit 4
similar to 18978232, possible Zn-dependent metalloprotease
CCAAT-binding factor (CBF)/MAK21 family protein
possible nucleotide kinase related to CMP and AMP kinases
hypothetical protein with possible signal peptide and one transmembrane region
uncharacterized protein with several coiled coil regions
SECIS binding protein. pelota RNA binding domain containing protein
similar to putative diphthamide biosynthesis protein
Dbp9p, eIF4A-1-family RNA SFII helicase, DEXDc+HELICc
short region conserved in plasmodium, possible wider conserved domain, one or two transmembrane domains near C-terminus
domain with limited similarity to a domain RPA14, replication protein A (RPA), subunit RPA14
protein with 2x EF hands and 4 transmembrane regions
extracellular protein with a signal peptide sequence, MAM domain and a Cu amine oxidase domain
hypothetical protein with cysteine rich regions
putative sodium/calcium cation exchanger having 12 transmembrane domains and signal peptide
sodium/calcium cation exchanger having 12 transmembrane domains and signal peptide
CorA family mitochondrial membrane protein with 2 transmembrane domains at C-terminus
similar to 80 kDa MCM3-associated protein; similar to gi:19744967
DRG-like OBG family GTpase fused to an RNA binding domain TGS domain, Fun11p
dolichyl-phosphate-mannose-glycolipid alpha-mannosyltransferase involved in GPI anchor biosynthesis
hypothetical protein with 4 or more possible transmembrane domains
small conserved protein, similar to bacterial BolA
putative protein kinase CK2 regulatory subunit CK2B1
protein kinase CK2 regulatory subunit CK2B1
UIM domain and EF hand containing protein that also has a conserved domain between
multiprotein bridging factor type 1 like transcriptional co-activator
small protein with possible EF hand domains, calmodulin like
similar to clathrin adaptor complex, small subunit
Cbf5p; centromere-binding factor 5 like PUA domain containing protein with a type I pseudouridine synthase domain
possible apicomplexan protein with ortholog in plasmodium and paralog in cryptosporidium
Snu114p GTpase, U5 snRNP-specific protein, 116 kDa
60S ribosomal protein L30, pelota RNA binding domain containing protein
DEAD/DEAH box ATP-dependent RNA helicase, putative
DEAD/DEAH box ATP-dependent RNA helicase
Yer007c-ap/MCT-1 like PUA RNA binding domain containing protein
hypothetical protein with central pro-glu repeat
hypothetical protein with 7 transmembrane domain domain
hypothetical protein with signal peptide, proline rich
histone transcription regulator (HIR1)-like WD40 repeat protein
putative sugar transporter with 12 transmembrane domains
sugar transporter with 12 transmembrane domains
conserved protein with UAS domain, possible ubiquitin protein
large protein with a UBR1-like ring finger related treble clef
conserved protein, COG SSU ribosomal protein S8E
P-type ATpase3, 13 transmembrane regions
cutinase negative acting protein, putative
cryptosporidium Cp22.4.1 protein with 4 Znknuckle_C2HC
secreted insulinase like peptidase, signal peptide
possible t-snare domain, possible transmembrane domain or GPI anchor signal at C-terminus
Dbr1p-like RNA lariat debranching enzyme
putative amino acid transporter, 11 transmembrane domain protein
amino acid transporter, 11 transmembrane domain protein
cryptosporidium 'FGLN' family of putative secreted proteins having signal peptides