Shinella zoogloeoides strain ATCC 19623 plasmid unnamed4, complete sequence.
type: Entry
definition: Shinella zoogloeoides strain ATCC 19623 plasmid unnamed4, complete sequence.
sequence version: NZ_CP086614.1
sequence date: 2022-12-05
sequence: sequence
division: CON
label: NZ_CP086614.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN21211842
keyword: RefSeq
source: Shinella zoogloeoides
organism: Shinella zoogloeoides
taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Shinella.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP086614.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: SOAPdenovo v. Version 2.04\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 100.0x\nSequencing Technology :: Illumina Hiseq+PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/05/2022 05:09:11\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,735\nCDSs (total) :: 4,669\nGenes (coding) :: 4,586\nCDSs (with protein) :: 4,586\nGenes (RNA) :: 66\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 53\nncRNAs :: 4\nPseudo Genes (total) :: 83\nCDSs (without protein) :: 83\nPseudo Genes (ambiguous residues) :: 0 of 83\nPseudo Genes (frameshifted) :: 17 of 83\nPseudo Genes (incomplete) :: 68 of 83\nPseudo Genes (internal stop) :: 11 of 83\nPseudo Genes (multiple problems) :: 12 of 83\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 34705
topology: circular
so has quality: SO_0000988
location: 1..34705
location: region:1-34705:1
RO_0002162: 352475

NZ_CP086614
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN21211842
type: BioSample
SIO_000068: biosample

1
title: Cellulose-mediated floc formation by the activated sludge bacterium Shinella zoogloeoides ATCC 19623
author: Gao, N.
journal: Unpublished

2
title: Direct Submission
author: Gao, N.
journal: Submitted (17-SEP-2021) Fisheries Research Institute, Anhui Academy of Agricultural Sciences, Nongke road 40, Hefei, Anhui 230031, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34705:1
position: 34705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-34705:1:source
so part of: sequence
organism: Shinella zoogloeoides
mol type: genomic DNA
strain: ATCC 19623
isolation source: activated sludge
culture collection: ATCC:19623
type material: type strain of Shinella zoogloeoides
plasmid: unnamed4
country: USA
lat lon: 38.53 N 77.02 W
collection date: 1960

352475
type: Taxonomy
SIO_000068: taxonomy

K8M09_RS23465
type: Gene
subclass of: SO_0000704
RO_0002162: 352475
locus tag: K8M09_RS23465
old locus tag: K8M09_23460
so part of: sequence
location: complement(join(34295..34705,1..834))
location: region:1-34705:-1
so has part: feature:1-834:-1:exon
so has part: feature:34295-34705:-1:exon
subclass of: SO_0000010

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34705:-1
position: 34705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-834:-1:exon

position:834:-1
position: 834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:34295-34705:-1:exon

position:34295:-1
position: 34295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

K8M09_RS23465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 352475
locus tag: K8M09_RS23465
old locus tag: K8M09_23460
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTQMDSKLALGFTERVFAEALALKTSTAGARPVDAVEQLLTQALVRNMHDAESLKLCKPPSAHIHAMYRKDRWASLAHLAQSGYETSYVELKFSTPADAAVAHIVVEGYGLELKPVDYGPAGFMTHRLWSKKLKTQTNHILRLNHLQVPSSIFSMAIEALGKMPPLEQPFIANPRPGPRPPGFEMDVDGFELVSFDHVLSGKRHFCSCARLAHEKMKSKGTNGGTLSDLMNRLLADVEYRKGICHLCVANSAGAEAAADLYGDAVQEFVAAYITQMMLTHGMDKATARSDVQKTLGLSRWVREAEMYGLIKKLFPEEIILREASPAWLGRQRLDVYLPALNLALEYQGEQHYKAVNAFGGEAALQRNLERDALKKSLCMENGLHLVEVRFDDPLTLPALRQRLQRFLNSGVVEK
SIO_010081: K8M09_RS23465
subclass of: SO_0000673
so part of: K8M09_RS23465
location: complement(join(34295..34705,1..834))
location: region:1-34705:-1
so has part: feature:1-834:-1:exon
so has part: feature:34295-34705:-1:exon

WP_160788004.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-834:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:34295-34705:-1:exon

K8M09_RS23470
type: Gene
subclass of: SO_0000704
RO_0002162: 352475
locus tag: K8M09_RS23470
old locus tag: K8M09_23465
so part of: sequence
location: complement(838..1179)
location: region:838-1179:-1
so has part: feature:838-1179:-1:exon
subclass of: SO_0000010

position:838:-1
position: 838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1179:-1
position: 1179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:838-1179:-1:exon

K8M09_RS23470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 352475
locus tag: K8M09_RS23470
old locus tag: K8M09_23465
inference: COORDINATES: protein motif:HMM:NF012774.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thermonuclease family protein
translation: MIDKTHIRLAGIDAPELDHPYGKQAKWAMVQLCKGQTVTARIRPELSYDRVVAECSLPDGRDLAAEMVRAGMALDWPKFSGGKYRHLEAPDARRKLWRADARQRGKLKMQNDC
SIO_010081: K8M09_RS23470
subclass of: SO_0000673
so part of: K8M09_RS23470
location: complement(838..1179)
location: region:838-1179:-1
so has part: feature:838-1179:-1:exon

WP_206366715.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:838-1179:-1:exon

K8M09_RS23695
type: Gene
subclass of: SO_0000704
RO_0002162: 352475
locus tag: K8M09_RS23695
so part of: sequence
location: complement(1574..3118)
location: region:1574-3118:-1
so has part: feature:1574-3118:-1:exon
subclass of: SO_0000010

position:1574:-1
position: 1574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3118:-1
position: 3118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1574-3118:-1:exon

K8M09_RS23695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 352475
locus tag: K8M09_RS23695
inference: COORDINATES: protein motif:HMM:NF017183.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Ig domain-containing protein
translation: MVAFAVTSMTVMAGSAFAACTNPAGDAGHVIFNTTVKTMQYCNGSNWINAGAVIPNAPQTGCTMPEGVPGEVIYASPTGVIQFCNGSSWVNTACAAKRKPNGPGCGGDVAGTLRYNSTHNELQFCDSTDWVAMGWACPTDLSDPVWNSPTTYSYTAMMGQPFGFVPNVSDDGPTITFSLQGTLPTGATFNAATGGVSGIPSALGTYTFTIRATDASANIVERTFTVDVVPAEVVVHIAANTTNVNLQSLFSGADWADTVKTKRVIVNTGVTVGSTSAGTAAMLTGTGRGKDLIIENNGTIAGAGGTGNGGAGGNALLVQQTGVTVVNSGNLYGGGGGGGKGGTGGGGYYGASEGPVANGSYFYEQWLGEGASWRVVWAGVHKAGGATWNGPTSVVGNDGATYYKGGHYSGALYYVSRSATAYTSGGTGGNGGRGQGSDGAATAGLTGAAGGTNAGAGGTGGAGGGWGTAGTAGATGAAGNNGAGLAGNAGGTAGAAITGTAYTLTNTGSILGSH
SIO_010081: K8M09_RS23695
subclass of: SO_0000673
so part of: K8M09_RS23695
location: complement(1574..3118)
location: region:1574-3118:-1
so has part: feature:1574-3118:-1:exon

WP_160788006.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1574-3118:-1:exon

K8M09_RS23480
type: Gene
subclass of: SO_0000704
RO_0002162: 352475
locus tag: K8M09_RS23480
old locus tag: K8M09_23475
so part of: sequence
location: 3367..3636
location: region:3367-3636:1
so has part: feature:3367-3636:1:exon
subclass of: SO_0000010

position:3367:1
position: 3367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3636:1
position: 3636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3367-3636:1:exon

K8M09_RS23480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 352475
locus tag: K8M09_RS23480
old locus tag: K8M09_23475
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MARMGCDELQATAAIEQAAIAIATRRAAEKKATRTAGLWILGFGAIMLALAMYMGSGDVPNGRVGRLVMGYVVGGGASVVGIWLLLRGS
SIO_010081: K8M09_RS23480
subclass of: SO_0000673
so part of: K8M09_RS23480
location: 3367..3636
location: region:3367-3636:1
so has part: feature:3367-3636:1:exon

WP_229342561.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3367-3636:1:exon

K8M09_RS23485
type: Gene
subclass of: SO_0000704
RO_0002162: 352475
locus tag: K8M09_RS23485
old locus tag: K8M09_23480
so part of: sequence
location: 3639..4166
location: region:3639-4166:1
so has part: feature:3639-4166:1:exon
subclass of: SO_0000010

position:3639:1
position: 3639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4166:1
position: 4166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3639-4166:1:exon

K8M09_RS23485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 352475
locus tag: K8M09_RS23485
old locus tag: K8M09_23480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011950477.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTTNGLTAGTADTGTKATLPYPGSEATVGQLLSLADEYFKAAYGLLPQVSRIDPRTSSAPARLCAIHAVECYLNAFLLFQDVSREEVRGLQHNLAKRAELAVAKGLKLKVKTHVHLLRLNDQREYLVVRYGPERVSGLTELNRVFATLKEIGVKVAASIRSQPYEPSDPRFKPYW
SIO_010081: K8M09_RS23485
subclass of: SO_0000673
so part of: K8M09_RS23485
location: 3639..4166
location: region:3639-4166:1
so has part: feature:3639-4166:1:exon

WP_229342562.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3639-4166:1:exon

K8M09_RS23490
type: Gene
subclass of: SO_0000704
RO_0002162: 352475
locus tag: K8M09_RS23490
old locus tag: K8M09_23485
so part of: sequence
location: complement(4320..6617)
location: region:4320-6617:-1
so has part: feature:4320-6617:-1:exon
subclass of: SO_0000010

position:4320:-1
position: 4320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6617:-1
position: 6617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4320-6617:-1:exon

K8M09_RS23490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 352475
locus tag: K8M09_RS23490
old locus tag: K8M09_23485
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTWLHKPMLRRILMGAAAAFCMALPVQAEGIWSEYAFISSTLGVSDSRICIGEASRGDIGCPSFAPTISPTGRINASAGLTVDAVSLTTGGTTWGYLGSTASYIPNLNTNTISVSTINGVSVSALGGGASPTNVPAFSVYRSSNQTNITATDNVIQFDVKEFDNFNNFNTSNYRFTPTIAGNYLITLNTHCTAGNGGCYAGITKNGVIRNYGVKSAYSTVSVIVSMNGSTDYVQGIAYGGSPAETVAGTAPNSSRMTGSLLASGNGLISGTGVTALAGLTDVALSSPATGQVLTYNGTRWVNATPSATTVISGTTSMVSGWPDAIACRTNDSSHYLVFYNAYGYTSGIIGYRFIQDASAGAEYSVRFNNNGTYNSTINGSGYIDSCLNKPIAQLYAEGKAFNFIGNSGVGGGALGDRLTSGTLAVTANSGTAIVSLSTGGTTWGYLGSAGSYLPSLTSSKVSATTISTTAVQVVSATAPLTCDSDKAGTLRYNSTNTALELCTGTGWQMMGVGIPAGTISAFASTTCPTGWSEYTPARGRFLRGIDNGAGNDPSGTRVPGNVQEDVFKTHSVTISPAATASTGSGTGFIRGGDATGAGFNMTGTASGGAETRPKNVAVTYCQFNGTSNGWNNPLSGGSTVPGGSTGQIQYNTSGSFDGSAGLTYDNANSRLTTVNISATALTVNGVPITGSASGDRITSGTSSAIATPSGTIAVSGSLNVSGAVVGESFTVSTTVKMRNNPSATCVSGTLGAVTQINSKLYFCRM
SIO_010081: K8M09_RS23490
subclass of: SO_0000673
so part of: K8M09_RS23490
location: complement(4320..6617)
location: region:4320-6617:-1
so has part: feature:4320-6617:-1:exon

WP_160788008.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4320-6617:-1:exon

K8M09_RS23495
type: Gene
subclass of: SO_0000704
RO_0002162: 352475
locus tag: K8M09_RS23495
old locus tag: K8M09_23490
so part of: sequence
location: 6862..7194
location: region:6862-7194:1
so has part: feature:6862-7194:1:exon
subclass of: SO_0000010

position:6862:1
position: 6862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7194:1
position: 7194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6862-7194:1:exon

K8M09_RS23495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 352475
locus tag: K8M09_RS23495
old locus tag: K8M09_23490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003522901.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3768 domain-containing protein
translation: MTSETTTLIAELNDLFRTTFLTGRVLMTEGVLVLPDHVQTLIVEGVQTFDAFGADNDPFGEHDFGAVTVEGHTVFWKIDYYAPDMIHGSEDPSNPAVTRRVLTIMLAREH
SIO_010081: K8M09_RS23495
subclass of: SO_0000673
so part of: K8M09_RS23495
location: 6862..7194
location: region:6862-7194:1
so has part: feature:6862-7194:1:exon

WP_160788009.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6862-7194:1:exon

K8M09_RS23500
type: Gene
subclass of: SO_0000704
RO_0002162: 352475
locus tag: K8M09_RS23500
old locus tag: K8M09_23495
so part of: sequence
location: complement(7191..7586)
location: region:7191-7586:-1
so has part: feature:7191-7586:-1:exon
subclass of: SO_0000010

position:7191:-1
position: 7191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7586:-1
position: 7586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7191-7586:-1:exon

K8M09_RS23500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 352475
locus tag: K8M09_RS23500
old locus tag: K8M09_23495
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013480810.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: stability/partitioning determinant
translation: MSNRPSLGFDDDDESVTPPAKADVLDLSGFQPKPVVRPDRQKVAEAAAKAQFRSREAKAPVAMAPVTTPAQVKVTRRRRTGRSAQLNLKCRPDTIEQFYAIADANGWVLGEAFERAVDLLEQDVKAKRKGS
SIO_010081: K8M09_RS23500
subclass of: SO_0000673
so part of: K8M09_RS23500
location: complement(7191..7586)
location: region:7191-7586:-1
so has part: feature:7191-7586:-1:exon

WP_160788010.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7191-7586:-1:exon

K8M09_RS23505
type: Gene
subclass of: SO_0000704
RO_0002162: 352475
locus tag: K8M09_RS23505
old locus tag: K8M09_23500
so part of: sequence
location: complement(7587..8276)
location: region:7587-8276:-1
so has part: feature:7587-8276:-1:exon
subclass of: SO_0000010

position:7587:-1
position: 7587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8276:-1
position: 8276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7587-8276:-1:exon

K8M09_RS23505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 352475
locus tag: K8M09_RS23505
old locus tag: K8M09_23500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007427784.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MPVISFANPKGGAGKTTSALLLAGELAARGASVAIVDADPERWISQWGAMPGKPANITIIGDVTEDSVVDVVEDASTEHQFVIIDLEGTASLMVANAIGMSDFVIIPTQGASMDAKGASKTIKLIRNQARLAKREIPHAVLLTRVSAAVASRSLKNVRDQLDAAGIEVFASSIVERAAYRDMLDFGGLLSKLDPKHVSNLDKAVQNAMDFTAEVITRLKDAQAEQGRAA
SIO_010081: K8M09_RS23505
subclass of: SO_0000673
so part of: K8M09_RS23505
location: complement(7587..8276)
location: region:7587-8276:-1
so has part: feature:7587-8276:-1:exon

WP_170299610.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7587-8276:-1:exon

K8M09_RS23510
type: Gene
subclass of: SO_0000704
RO_0002162: 352475
locus tag: K8M09_RS23510
old locus tag: K8M09_23505
so part of: sequence
location: 8528..9760
location: region:8528-9760:1
so has part: feature:8528-9760:1:exon
subclass of: SO_0000010

position:8528:1
position: 8528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9760:1
position: 9760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8528-9760:1:exon

K8M09_RS23510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 352475
locus tag: K8M09_RS23510
old locus tag: K8M09_23505
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003501130.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiator protein A
translation: MATKKLHLKTREAFADLSLHEKNAYLQEVADEIADTRGDNRVVLDKDALSRLRRYYSRRSMADLRLDEMGGPMAVSFRNIAESIRSDEVHALVAHEIPTTRSTRRVYSNSRPAPIDDAQLMFFVPSVHDAPLKDDFNLMDIAPFSLSKSGGQGVIRYELKDSVITIEGGAEVGIATAYDYDIVINMISHLAEATRRFRIDDAKGLKASIPPRVYRPAAAEILKFCRRELGGKQYEDLERALARLQATHIRITNLKGGEGRRDRRETESFPLIGRYKVVSRTNQDRIDQVEIEIPGWIYDGVVRPDGKPTILTLNPDYFLLSRPLARFIYRLARKAAGEGEAFYSVTELKKRSASLLPMRKFRKAIQEIVENAQVLPLPDYDLELEDRGHDLILIMRNRTRRLAASEAASA
SIO_010081: K8M09_RS23510
subclass of: SO_0000673
so part of: K8M09_RS23510
location: 8528..9760
location: region:8528-9760:1
so has part: feature:8528-9760:1:exon

WP_160788011.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8528-9760:1:exon

K8M09_RS23515
type: Gene
subclass of: SO_0000704
RO_0002162: 352475
locus tag: K8M09_RS23515
old locus tag: K8M09_23510
so part of: sequence
location: complement(10366..12729)
location: region:10366-12729:-1
so has part: feature:10366-12729:-1:exon
subclass of: SO_0000010

position:10366:-1
position: 10366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12729:-1
position: 12729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10366-12729:-1:exon

K8M09_RS23515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 352475
locus tag: K8M09_RS23515
old locus tag: K8M09_23510
EC number: 3.4.24.-
inference: COORDINATES: protein motif:HMM:NF013594.2
GO function: GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M48 family metalloprotease
translation: MVSFSHILRPASLRAAITCYALVTACRYLWALLTNGIVSGPAYLHPFDTAPINALSYMLSHLYMPLGGLLTFALWVAQAVLLWRLVRLIGNGDEAKSERPQPESWLATPILLGFIVLLTCSIIGWIVQTGASPRHFFGYLAYGSSVPVQVGLVLSLLGFAFGGRFVAGAKAAVGGLFGVNYLPKDHPLSQRVARHAGTLGISHAPALGTVNVMNAFAVGTPKDSAVILGQPLMDLLTEDELDAVIGHELGHVYHNDMNRMQFAEGFQRMLGSVISATTAILVSALSRNRSDVMLGRAVGSSLRQTVFVGSELVVKRISRTREFHADAIGARIASPAAMIGALERLHGIPAQPTKLETQYGYLMFRGSRFGAWFSTHPHLEKRIKALRAIEARQGGDEAIENNLVPHSQLDALAVTAAAALGSAKTGLAAASTSLDLPERGRSAWAKVVRLIAKRPSWHVGLRSTILTGATLAALFFIAPAIWSYYGLGEKAESLRTSAFRTYDSISASLADVSERAIASLTSYGQPFDKDQTSPQASQTEADGITGEIARLRRELLEVKFDRNRLRNEVAKLREEAIIPTTNTSDLQRQLEQQRASITALQKQLAQQSRTVSQPPSGDVEKLLGERNVQLSDKVDEQRGTIVGLRQDIETLRFKIQQQEAQLSGAAAENTSDTDTDTAASWLAAAVDRQGDVDTATLLQSREDAERLALRKCGGATAGCKLIGAWRNGCFALSRPAGQKVRQNWWFAADNGAQAAERRASRQCRQESGAPRCDIRISVCSPAHLSKI
SIO_010081: K8M09_RS23515
subclass of: SO_0000673
so part of: K8M09_RS23515
location: complement(10366..12729)
location: region:10366-12729:-1
so has part: feature:10366-12729:-1:exon

WP_160788012.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10366-12729:-1:exon

K8M09_RS23520
type: Gene
subclass of: SO_0000704
RO_0002162: 352475
locus tag: K8M09_RS23520
old locus tag: K8M09_23515
so part of: sequence
location: complement(12756..14489)
location: region:12756-14489:-1
so has part: feature:12756-14489:-1:exon
subclass of: SO_0000010

position:12756:-1
position: 12756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14489:-1
position: 14489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12756-14489:-1:exon

K8M09_RS23520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 352475
locus tag: K8M09_RS23520
old locus tag: K8M09_23515
inference: COORDINATES: protein motif:HMM:NF014581.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretory system conjugative DNA transfer family protein
translation: MSQAKGRSPLPEKLDFRFADATTTGAVSGKRGLQVADWLKGFDPLKGVDLFGSKSSGSSFDGVSTGWKIATEISKTVASHKARKKMEEDAARERERLRETLENPPPIHGSARWATATELNQARILQPLSALDTPASILLGVFPDPELNDRPVGQIHWNGEGHLITVAPTRSGKSTTMIVPNLLRYRGSCIVLDPKGELYRDTAGWRSTLGPVYRIAPFGKGSDGFNPLAAIDSFSDARALASLLMPPDPKAQNFFRNDAIAFLTALIMFVVKGAPPERRTMQEIRDITAGPLAGLQQIAEDMANSGVSAIANPATTMLGKRREALATLRDTFNSELAIWDDPGISEATREGIDFKALKDSPATVYITVPFDKMEAYSSFLKVILASALDAMLRNERQPDIPVLFVLDEFLSLGPFPQFRDAIRTHAGAGVRLWFFLQDLSTLEEHYPSSWKTFLNSAVKMFFGTNDAFTGRLVSELLLGEATVAHITGGVSSSGSTTGSEFFDKSTTRGHSINANVQFSQRPLLTATEVVSLLSTTNPDHTRTGIITIGQISRPIKVRLVPWFLGQTCKARAALPVL
SIO_010081: K8M09_RS23520
subclass of: SO_0000673
so part of: K8M09_RS23520
location: complement(12756..14489)
location: region:12756-14489:-1
so has part: feature:12756-14489:-1:exon

WP_160788013.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12756-14489:-1:exon

K8M09_RS23525
type: Gene
subclass of: SO_0000704
RO_0002162: 352475
locus tag: K8M09_RS23525
old locus tag: K8M09_23520
so part of: sequence
location: 14650..14844
location: region:14650-14844:1
so has part: feature:14650-14844:1:exon
subclass of: SO_0000010

position:14650:1
position: 14650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14844:1
position: 14844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14650-14844:1:exon

K8M09_RS23525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 352475
locus tag: K8M09_RS23525
old locus tag: K8M09_23520
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002769067.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system HicA family toxin
translation: MPWRDIEAMLAACGAEITEGQGSRVRIALNGVRAVFHRPHPQKETDKGAVKSVRRFLLEAEIQP
SIO_010081: K8M09_RS23525
subclass of: SO_0000673
so part of: K8M09_RS23525
location: 14650..14844
location: region:14650-14844:1
so has part: feature:14650-14844:1:exon

WP_229342565.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14650-14844:1:exon

K8M09_RS23530
type: Gene
subclass of: SO_0000704
RO_0002162: 352475
locus tag: K8M09_RS23530
old locus tag: K8M09_23525
so part of: sequence
location: 14841..15170
location: region:14841-15170:1
so has part: feature:14841-15170:1:exon
subclass of: SO_0000010

position:14841:1
position: 14841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15170:1
position: 15170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14841-15170:1:exon

K8M09_RS23530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 352475
locus tag: K8M09_RS23530
old locus tag: K8M09_23525
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012457036.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system HicB family antitoxin
translation: MTMMHYKGYEAVVEFDEEAEIFHGEVINLRDVITFQGASAAELKQAFAESVEDYLAFCAERGEEPEKPFSGQFVVRTEPGLHKALTVAARRAGVSLNKWVTSTLERAVG
SIO_010081: K8M09_RS23530
subclass of: SO_0000673
so part of: K8M09_RS23530
location: 14841..15170
location: region:14841-15170:1
so has part: feature:14841-15170:1:exon

WP_206366716.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14841-15170:1:exon

K8M09_RS23535
type: Gene
subclass of: SO_0000704
RO_0002162: 352475
locus tag: K8M09_RS23535
old locus tag: K8M09_23530
so part of: sequence
location: 15295..15558
location: region:15295-15558:1
so has part: feature:15295-15558:1:exon
subclass of: SO_0000010

position:15295:1
position: 15295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15558:1
position: 15558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15295-15558:1:exon

K8M09_RS23535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 352475
locus tag: K8M09_RS23535
old locus tag: K8M09_23530
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020812900.1
GO process: GO:0051983 - regulation of chromosome segregation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system ParD family antitoxin
translation: MASSANLGDKLETYVSDLVKTGRYNSRSEVLREGVRLVEEREKRLASLDAAIARGLADVAAGRTRPIEDVAAELSAKYRKMAEERGL
SIO_010081: K8M09_RS23535
subclass of: SO_0000673
so part of: K8M09_RS23535
location: 15295..15558
location: region:15295-15558:1
so has part: feature:15295-15558:1:exon

WP_160788014.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15295-15558:1:exon

K8M09_RS23540
type: Gene
subclass of: SO_0000704
RO_0002162: 352475
locus tag: K8M09_RS23540
old locus tag: K8M09_23535
so part of: sequence
location: 15555..15854
location: region:15555-15854:1
so has part: feature:15555-15854:1:exon
subclass of: SO_0000010

position:15555:1
position: 15555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15854:1
position: 15854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15555-15854:1:exon

K8M09_RS23540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 352475
locus tag: K8M09_RS23540
old locus tag: K8M09_23535
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020812899.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MNVHITEEARADLERIGDYIAIDNPVRADTFVWELTNRCLALADMPRAFPLVPRYEHTGVRRRPHGDYLIFYQVGVDTVDILHVLNGAQNYEAILFPEA
SIO_010081: K8M09_RS23540
subclass of: SO_0000673
so part of: K8M09_RS23540
location: 15555..15854
location: region:15555-15854:1
so has part: feature:15555-15854:1:exon

WP_160788015.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15555-15854:1:exon

K8M09_RS23545
type: Gene
subclass of: SO_0000704
RO_0002162: 352475
locus tag: K8M09_RS23545
old locus tag: K8M09_23540
so part of: sequence
location: 16199..17317
location: region:16199-17317:1
so has part: feature:16199-17317:1:exon
subclass of: SO_0000010

position:16199:1
position: 16199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17317:1
position: 17317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16199-17317:1:exon

K8M09_RS23545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 352475
locus tag: K8M09_RS23545
old locus tag: K8M09_23540
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007630327.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobA/MobL family protein
translation: MAIFHLHVKNISRGDGRSAVAAAAYRAGETLPNEIEERDSAFGGRRDVLHAEIVCPVGVPPWMLDRATLWNAVEAAERRKDARLAKEIEAALPRELPPEAWLVVCRTFAAHYAGQGFVADFSIHDDGSAHNPHVHVMLTTRIVTGAGFGGKIRSADGRQFVEDARAVWAELVNAALAKAGLDVSVDPRSHARAGVDRVPTQHRGPDAAERRSRREKMGLSRLLMSKVVKEPDGERARLLRDWPASQMRHSLAENGDMPVPGPDGGLISQGQLDEAQTRMLDDMESPSRDEPARALARRWSENPEPSHRPPQDHTAPFTSRRWATEVSDPEPADEREASFRSRRWETGHEDGSHQEPEREREYEERVRERTRD
SIO_010081: K8M09_RS23545
subclass of: SO_0000673
so part of: K8M09_RS23545
location: 16199..17317
location: region:16199-17317:1
so has part: feature:16199-17317:1:exon

WP_160788016.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16199-17317:1:exon

K8M09_RS23550
type: Gene
subclass of: SO_0000704
RO_0002162: 352475
locus tag: K8M09_RS23550
old locus tag: K8M09_23545
so part of: sequence
location: 17514..17906
location: region:17514-17906:1
so has part: feature:17514-17906:1:exon
subclass of: SO_0000010

position:17514:1
position: 17514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17906:1
position: 17906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17514-17906:1:exon

K8M09_RS23550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 352475
locus tag: K8M09_RS23550
old locus tag: K8M09_23545
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSGGSGSERDEERTLTKRLQDLQAQMNRLEVEDDMYLKRAYDDPAEAEERMVAYRDDNGEDALFVALRERPELFGDYPRDKARFDDAYQARKQLPVTFANYRRLRDDSDILQVQLQRLQREREDDLHPER
SIO_010081: K8M09_RS23550
subclass of: SO_0000673
so part of: K8M09_RS23550
location: 17514..17906
location: region:17514-17906:1
so has part: feature:17514-17906:1:exon

WP_160788017.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17514-17906:1:exon

K8M09_RS23555
type: Gene
subclass of: SO_0000704
RO_0002162: 352475
locus tag: K8M09_RS23555
old locus tag: K8M09_23550
so part of: sequence
location: complement(17907..18197)
location: region:17907-18197:-1
so has part: feature:17907-18197:-1:exon
subclass of: SO_0000010

position:17907:-1
position: 17907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18197:-1
position: 18197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17907-18197:-1:exon

K8M09_RS23555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 352475
locus tag: K8M09_RS23555
old locus tag: K8M09_23550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003501116.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKGTILERVQEMTRQAQEREAEKLMTLELVKEAISEAARQGYSRAVIVPAKALDLTKTEMAKATVAQLRKEGFRTEWEVRLQADNTSYQALVVSW
SIO_010081: K8M09_RS23555
subclass of: SO_0000673
so part of: K8M09_RS23555
location: complement(17907..18197)
location: region:17907-18197:-1
so has part: feature:17907-18197:-1:exon

WP_160788018.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17907-18197:-1:exon

K8M09_RS23560
type: Gene
subclass of: SO_0000704
RO_0002162: 352475
locus tag: K8M09_RS23560
old locus tag: K8M09_23555
so part of: sequence
location: complement(18194..19093)
location: region:18194-19093:-1
so has part: feature:18194-19093:-1:exon
subclass of: SO_0000010

position:18194:-1
position: 18194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19093:-1
position: 19093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18194-19093:-1:exon

K8M09_RS23560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 352475
locus tag: K8M09_RS23560
old locus tag: K8M09_23555
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003501115.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: integrase domain-containing protein
translation: MDDLSFSLKTLCSRSGEGSFGTRALRQRGLTAMALDLKTMGYRLPGAASLKGKHVTALVAHWKTGGLSDQTIRNRLTWLRWWAFQVGKPGLLPKTNDTFGLAERGRFSDNKAKRLEGAALQRVRDTRVQLALKLEAAFGLRREEALKLRPVLADRGDRIALKASWCKGGRYREIPITHDKQRALLDEVRAVVGDGSLIGAGRNYHQALKSYENQLIRAGISNAHGYRHAYAQWRYKALTGWSCPAAGGPTVDKMTPAHAARDRSARLEISHELGHGRLDVTDTYLGRRFAPVAKKESAA
SIO_010081: K8M09_RS23560
subclass of: SO_0000673
so part of: K8M09_RS23560
location: complement(18194..19093)
location: region:18194-19093:-1
so has part: feature:18194-19093:-1:exon

WP_160788019.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18194-19093:-1:exon

K8M09_RS23565
type: Gene
subclass of: SO_0000704
RO_0002162: 352475
locus tag: K8M09_RS23565
old locus tag: K8M09_23560
so part of: sequence
location: 20189..20407
location: region:20189-20407:1
so has part: feature:20189-20407:1:exon
subclass of: SO_0000010

position:20189:1
position: 20189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20407:1
position: 20407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20189-20407:1:exon

K8M09_RS23565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 352475
locus tag: K8M09_RS23565
old locus tag: K8M09_23560
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003501113.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKNRNHTSRPTHNVYVVEGEGDTAFWTKVGAAWQHADGEGLNLTLTALPLNGRLVIRVPKASDEQPNGKAGR
SIO_010081: K8M09_RS23565
subclass of: SO_0000673
so part of: K8M09_RS23565
location: 20189..20407
location: region:20189-20407:1
so has part: feature:20189-20407:1:exon

WP_160788020.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20189-20407:1:exon

K8M09_RS23570
type: Gene
subclass of: SO_0000704
RO_0002162: 352475
locus tag: K8M09_RS23570
old locus tag: K8M09_23565
so part of: sequence
location: 20404..21084
location: region:20404-21084:1
so has part: feature:20404-21084:1:exon
subclass of: SO_0000010

position:20404:1
position: 20404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21084:1
position: 21084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20404-21084:1:exon

K8M09_RS23570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 352475
locus tag: K8M09_RS23570
old locus tag: K8M09_23565
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011509163.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA methyltransferase
translation: MSPVRPRAENGHLVFDHEVPRSGVLQGDCLTAMPSLPGGCVDLVLTDPPYVCGYRDRSGRTVANDTCTDWLVPAYAEIYRVMKPGTLCITFYGWTATDSFMAAWRAAGFRLVGHLVFCKDYASRTGLFRSMHENAYVLAKGRAAMPAEALSDVRNWVYTGNKLHPTEKSVEVLKPLIRAYCPEGGLVFDPFAGSGSTLVAARDTGREYLGIELDPDHAATAARRLR
SIO_010081: K8M09_RS23570
subclass of: SO_0000673
so part of: K8M09_RS23570
location: 20404..21084
location: region:20404-21084:1
so has part: feature:20404-21084:1:exon

WP_160788021.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20404-21084:1:exon

K8M09_RS23575
type: Gene
subclass of: SO_0000704
RO_0002162: 352475
locus tag: K8M09_RS23575
old locus tag: K8M09_23570
so part of: sequence
location: 21326..21400
location: region:21326-21400:1
so has part: feature:21326-21400:1:exon
subclass of: SO_0000663

position:21326:1
position: 21326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21400:1
position: 21400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21326-21400:1:exon

K8M09_RS23575
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 352475
locus tag: K8M09_RS23575
old locus tag: K8M09_23570
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:2.0.9
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:21358..21360,aa:Gly,seq:tcc)
SIO_010081: K8M09_RS23575
subclass of: SO_0000673
so part of: K8M09_RS23575
location: 21326..21400
location: region:21326-21400:1
so has part: feature:21326-21400:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21326-21400:1:exon

K8M09_RS23580
type: Gene
subclass of: SO_0000704
RO_0002162: 352475
locus tag: K8M09_RS23580
old locus tag: K8M09_23575
so part of: sequence
location: 21497..21970
location: region:21497-21970:1
so has part: feature:21497-21970:1:exon
subclass of: SO_0000010

position:21497:1
position: 21497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21970:1
position: 21970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21497-21970:1:exon

K8M09_RS23580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 352475
locus tag: K8M09_RS23580
old locus tag: K8M09_23575
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGYPETLYFCFAATNKLTEIADGGSGMWTWIKRGLFVAVVGYGGYAAWDYYQGGFFSRPDMPEGAFSLSYKTGLRAIVVDVPDQRETRRYFGFPQEVPHYLRDVWSFCSPPSEDEQPNAEKFIADRNMPGERFEAVCRIQADKDLVIRGLITSVPRL
SIO_010081: K8M09_RS23580
subclass of: SO_0000673
so part of: K8M09_RS23580
location: 21497..21970
location: region:21497-21970:1
so has part: feature:21497-21970:1:exon

WP_160788022.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21497-21970:1:exon

K8M09_RS23585
type: Gene
subclass of: SO_0000704
RO_0002162: 352475
locus tag: K8M09_RS23585
old locus tag: K8M09_23580
so part of: sequence
location: 22084..22575
location: region:22084-22575:1
so has part: feature:22084-22575:1:exon
subclass of: SO_0000010

position:22084:1
position: 22084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22575:1
position: 22575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22084-22575:1:exon

K8M09_RS23585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 352475
locus tag: K8M09_RS23585
old locus tag: K8M09_23580
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003501110.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFRLPAALKAKGEEAEASFRAWLNQSGVAFMYVEQSPMNVPDRLRGRIKRPDYLVGIPHAGMMAFDVKAKSIYDEQLLFEVGEVDKLACFEAFFHMTVNFACLDLEEPDHFYWVPLRALIGCPIERRGKVRVFAFPVAHALKVEMTDSFLEAYGRFSLKSLGI
SIO_010081: K8M09_RS23585
subclass of: SO_0000673
so part of: K8M09_RS23585
location: 22084..22575
location: region:22084-22575:1
so has part: feature:22084-22575:1:exon

WP_160788023.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22084-22575:1:exon

K8M09_RS23590
type: Gene
subclass of: SO_0000704
RO_0002162: 352475
locus tag: K8M09_RS23590
old locus tag: K8M09_23585
so part of: sequence
location: 22687..23916
location: region:22687-23916:1
so has part: feature:22687-23916:1:exon
subclass of: SO_0000010

position:22687:1
position: 22687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23916:1
position: 23916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22687-23916:1:exon

K8M09_RS23590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 352475
locus tag: K8M09_RS23590
old locus tag: K8M09_23585
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013419117.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MLLDFRFTNFRSFRDEAVFSLAASADTTLESTHTRPTGLEKVKRILTSAAIYGANASGKSNVIRALQFMQLMVMTSNQIQPDQESTLTPFRMRPDFADHPTLFEATFLIEGVRYQYGFEMNRRQILGEWLLVYEKAKPQVWFSRTYNEKKAKYEYTYSDYFVGQKKVWEISTRKEVLFLTTAVQLNSEQLKPLYQCFAEDLVVLPDGPGVGFGFTAGYVQSAGNRERVQSVMMTADTGISSISVEKRMGRQFHLSFPGGAPEVQDAEFDVPQFGHTAGGDVYKFDIGEESAGTQILFELAGPILDILQKGRILVVDELDRSLHPLLVLKIVQMFNDPELNRNGAQLIFSTHDVSLLDGGKLRRDQVWFTEKDNEQVSHLFPLLEFSPRKGEALEKGYLSGRYGGIPILG
SIO_010081: K8M09_RS23590
subclass of: SO_0000673
so part of: K8M09_RS23590
location: 22687..23916
location: region:22687-23916:1
so has part: feature:22687-23916:1:exon

WP_160788024.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22687-23916:1:exon

K8M09_RS23595
type: Gene
subclass of: SO_0000704
RO_0002162: 352475
locus tag: K8M09_RS23595
old locus tag: K8M09_23590
so part of: sequence
location: 23931..24593
location: region:23931-24593:1
so has part: feature:23931-24593:1:exon
subclass of: SO_0000010

position:23931:1
position: 23931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24593:1
position: 24593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23931-24593:1:exon

K8M09_RS23595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 352475
locus tag: K8M09_RS23595
old locus tag: K8M09_23590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013419116.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RloB family protein
translation: MAKRHRFERLENRVVRKVGRKRPYDRMLIVCEGAKTEVNYFEAIRKDKRLPTAHIAVMPSDYGTSPLQIVQYAIDRFNQTKEFDRVYVVFDRDDHLTYHNALAKAGATDKALKNDGGVKVPFVAIPSVPNFELWVLLHFRDVLAPIHRDVVYAELKKPAAYPGYAKNSVTVFTDTKELIPAAKARAEALRDSFNAHDGNDPYTDVDVLTGELLKIAGRFN
SIO_010081: K8M09_RS23595
subclass of: SO_0000673
so part of: K8M09_RS23595
location: 23931..24593
location: region:23931-24593:1
so has part: feature:23931-24593:1:exon

WP_229342560.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23931-24593:1:exon

K8M09_RS23600
type: Gene
subclass of: SO_0000704
RO_0002162: 352475
locus tag: K8M09_RS23600
old locus tag: K8M09_23595
so part of: sequence
location: complement(24620..24946)
location: region:24620-24946:-1
so has part: feature:24620-24946:-1:exon
subclass of: SO_0000010

position:24620:-1
position: 24620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24946:-1
position: 24946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24620-24946:-1:exon

K8M09_RS23600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 352475
locus tag: K8M09_RS23600
old locus tag: K8M09_23595
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKVADAGRKLRLLRHELRDKHGLSYRELYRSVELPGTHPLKDAIEQLDAAVRSAYGMPKGADYLQFILELNQLVSKNEKKGLVVQGPGLPNSVKDRGSFISDDCIEP
SIO_010081: K8M09_RS23600
subclass of: SO_0000673
so part of: K8M09_RS23600
location: complement(24620..24946)
location: region:24620-24946:-1
so has part: feature:24620-24946:-1:exon

WP_160788025.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24620-24946:-1:exon

K8M09_RS23605
type: Gene
subclass of: SO_0000704
RO_0002162: 352475
locus tag: K8M09_RS23605
old locus tag: K8M09_23600
so part of: sequence
location: 25187..26325
location: region:25187-26325:1
so has part: feature:25187-26325:1:exon
subclass of: SO_0000010

position:25187:1
position: 25187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26325:1
position: 26325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25187-26325:1:exon

K8M09_RS23605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 352475
locus tag: K8M09_RS23605
old locus tag: K8M09_23600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611153.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MTRRPRRNHSPAFKAKVALAAIRGEQTLVELSQQFDVHANQIKQWKDQLLEGATGVFGDETKAEPSGPTIDVKTLHAKIGELTLENGFFIRCARQGGIAGRKEMIDREHKLSVVRQAKLLGFSRGSVYYLPRPVSDGDLALMRRIDELHLDYPFAGSRMLQGLLRGEGLETGRRHVATLMKKMGIEAIYRRPNTSKPAPGHKIYPYLLRKLAVTRPNQVWAMDLTYIPMARGFVYLCAVVDWFSRKVLSWRLSITMEAAFCIEAVEEALARHGRPEIFNTDQGSQFTSIDFTAVLKRSQIAISMDGKGAWRDNVFVERLWRSIKYEEVYLHAYKTVSEARAGIGRYLNFYNTRRPHSSLDRRTPDQAYFNALTPMMVAA
SIO_010081: K8M09_RS23605
subclass of: SO_0000673
so part of: K8M09_RS23605
location: join(25187..25445,25445..26325)
location: region:25187-26325:1
so has part: feature:25187-25445:1:exon
so has part: feature:25445-26325:1:exon

WP_229342049.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25187-25445:1:exon

position:25445:1
position: 25445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:25445-26325:1:exon

K8M09_RS23610
type: Gene
subclass of: SO_0000704
RO_0002162: 352475
locus tag: K8M09_RS23610
old locus tag: K8M09_23605
so part of: sequence
location: complement(26687..29653)
location: region:26687-29653:-1
so has part: feature:26687-29653:-1:exon
subclass of: SO_0000010

position:26687:-1
position: 26687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29653:-1
position: 29653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26687-29653:-1:exon

K8M09_RS23610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 352475
locus tag: K8M09_RS23610
old locus tag: K8M09_23605
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011983060.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tn3 family transposase
translation: MARRALLSEAWWQQATTIPDNEREIAKHYTLDRSDLDLIMRQNKAANRLGLACVLATLRYPGRPLANGEVLPAGVLRFLARQIGVDHHEIERYFERPQTRREHLALLFDRMQMRPFVPSDVRALTGWLTPAAQTLRQADVLADMVVEELRRRRILLPARPALEAIIHVAIRRGIRIAHRALAGGISEGQKLDLDKLLDPREGTSVTILAWARTPALSPAAVNLDRIAERIRFLRSLNLPTTLMDRIPAKVFDEFAAEGTRMSAQHLRDLNTERRHAVLAATVLHLSRHLTDCAIDMFKKLMGILTRRANNQAAARVTRSVREVQTPLKDVSKVCHAIIKAREKGEDMAKALDLVIQWPAFTTSVQAVDTLIAPDVIDGKIEMLQRYPTIRKLAPQFLSTLVFRGHAVAATLLRALSVVAGLYRTGKRTIPDKAPISFAPKGWMPLILKDGKIDRRAYELCLFSELKRRLDAGDVWVEGAKRFQSFESFLIPTPTFELMREEGPLPIAVDTDVETYLRQQRQLLNDGLADLSRLAAAGELDDVELTGAGFSVTPHKAMFPDIAKPLKLKVESRLPAIRITDLLLEVDARTEFSNAFTHLRSGRTADNKLALLTAILADGINLGLTRMADVSPGITMRQLAWAHDWHIREEGYTAAHAILVNAQRQLPLASLWGDGTTSSSDGQYFPAGGHAEAIGDLNGRYGPNPGAKFYRFTSDQYGAFYIIAMNANASEAIYVLDGLLYHGSDLAIETHYVDTGGVSDMSFALCHLVGFQIVPRLRGLKDRKLYLFPGDAPPENLAPLVGEHINVERIKANWNDILRLVTTIRSGQVRPSTVLAKLSAFPRQNGLALALRDLGRINRSIFLPQWWQNPEMRRNATVGLNKSESQNTLARALFFNRLGELRDRTFESQFYRASGLNLLINAIVYWNTLYLEPAFAELNRDGIPTPLDIIKHITPLGWQHISLTGDYIWTPTDGVDLRPLRRETSILAA
SIO_010081: K8M09_RS23610
subclass of: SO_0000673
so part of: K8M09_RS23610
location: complement(26687..29653)
location: region:26687-29653:-1
so has part: feature:26687-29653:-1:exon

WP_160788232.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26687-29653:-1:exon

K8M09_RS23615
type: Gene
subclass of: SO_0000704
RO_0002162: 352475
locus tag: K8M09_RS23615
old locus tag: K8M09_23610
so part of: sequence
location: 29819..30400
location: region:29819-30400:1
so has part: feature:29819-30400:1:exon
subclass of: SO_0000010

position:29819:1
position: 29819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30400:1
position: 30400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29819-30400:1:exon

K8M09_RS23615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 352475
locus tag: K8M09_RS23615
old locus tag: K8M09_23610
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011983061.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MTAIGYARVSTGDQDTALQLDALRKAGCERLFEDKASGMKTDRLGLAEAIRYVRDGDTLTVWKLDRLGRSMKHLIEIITELEAKGVGFRSITENIDTTTSGGRLVFHLFGALAQFERDLIRERTRAGLQAAEERGRRGGRQVVVTPDKLAKARQHLAAGLNVREAAARVKIGKTALYEALKAEKATTSTVKPT
SIO_010081: K8M09_RS23615
subclass of: SO_0000673
so part of: K8M09_RS23615
location: 29819..30400
location: region:29819-30400:1
so has part: feature:29819-30400:1:exon

WP_035218831.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29819-30400:1:exon

K8M09_RS23620
type: Gene
subclass of: SO_0000704
RO_0002162: 352475
locus tag: K8M09_RS23620
old locus tag: K8M09_23615
pseudo: true
so part of: sequence
location: complement(<30496..33192)
location: region:30496-33192:-1
so has part: feature:30496-33192:-1:exon
subclass of: SO_0000010

position:30496:-1
position: 30496
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:33192:-1
position: 33192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30496-33192:-1:exon

K8M09_RS23620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 352475
locus tag: K8M09_RS23620
old locus tag: K8M09_23615
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612398.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Tn3 family transposase
SIO_010081: K8M09_RS23620
subclass of: SO_0000673
so part of: K8M09_RS23620
location: complement(<30496..33192)
location: region:30496-33192:-1
so has part: feature:30496-33192:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30496-33192:-1:exon

K8M09_RS23625
type: Gene
subclass of: SO_0000704
RO_0002162: 352475
locus tag: K8M09_RS23625
old locus tag: K8M09_23620
so part of: sequence
location: 33318..33932
location: region:33318-33932:1
so has part: feature:33318-33932:1:exon
subclass of: SO_0000010

position:33318:1
position: 33318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33932:1
position: 33932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33318-33932:1:exon

K8M09_RS23625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 352475
locus tag: K8M09_RS23625
old locus tag: K8M09_23620
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010512305.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MLIGYARISKADGSQSLDLQHDALRAAGVEQDNIYEDRASGSRDDRPGLTACLKALRVGDVLVVWKLDRLGRSLAHLVNTVKGLSDQKIGLRVLTGKGAEIDTTTASGRMVFGIFATLAEFERDLIRERTMAGLAAARARGRKGGRKFALSKAQVRLAQAAMAQRDTSVSDLCKELGIERVTLYRYVGPQGELRSYGKRVLGLA
SIO_010081: K8M09_RS23625
subclass of: SO_0000673
so part of: K8M09_RS23625
location: 33318..33932
location: region:33318-33932:1
so has part: feature:33318-33932:1:exon

WP_160788003.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33318-33932:1:exon