Dictyostelium discoideum AX4 chromosome 6 chromosome, whole genome shotgun sequence.
Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium.
The genome of the social amoeba Dictyostelium discoideum
Submitted (20-NOV-2009) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (30-MAR-2006) dictyBase, Center for Genetic Medicine, Northwestern University, 303 E Chicago Ave, Chicago, IL 60611, USA
Submitted (08-OCT-2004) dictyBase, Center for Genetic Medicine, Northwestern University, 303 E Chicago Ave, Chicago, IL 60611, USA
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CM000155.\nOn Nov 20, 2009 this sequence version replaced NC_007092.2.
terminal gaps represent complex repetitive elements
Slime mold (D.discoideum) transposon DIRS-1, complete, clone SB41
STE20 family protein kinase; protein kinase, STE group
translation initiation factor eIF-2B beta subunit
protein serine/threonine kinase; protein kinase, Atypical group; Alpha kinase family protein; MHCK subfamily protein kinase
MHCK subfamily protein kinase; myosin heavy chain kinase; protein kinase, Atypical group; protein serine/threonine kinase
cellulose-binding domain-containing protein
dihydrolipoyl dehydrogenase; dihydrolipoamide dehydrogenase; glycine cleavage system L-protein
dihydrolipoamide:NAD oxidoreductase; dihydrolipoyl dehydrogenase; glycine cleavage system L-protein
hypothetical protein; hypothetical protein; Similar to flavin-containing
Q13868 Exosome complex exonuclease RRP4 (EC 3.1.13.-) (Ribosomal RNA processing protein 4) (Exosome component 2)
mitochondrial substrate carrier family protein
potassium channel tetramerization domain-containing protein
C2H2-type zinc finger-containing protein
leucine-tRNA ligase; leucyl-tRNA synthetase, mitochondrial; leucine-tRNA ligase, mitochondrial
leucine-tRNA ligase, mitochondrial; leucyl-tRNA synthetase; leucyl-tRNA synthetase, mitochondrial
fungal transcriptional regulatory protein, N-terminal domain-containing protein
hypothetical protein; NAK family protein kinase
G-protein-coupled receptor family 3 protein 5
GABA-B receptor protein; Similar to GPCR
Similar to GPCR; GABA-B receptor protein
tRNA-dihydrouridine synthase 4-like protein
phosphatidylinositol 3-kinase-related protein kinase
formin homology domain-containing protein
phosphatidylinositol 3-kinase-related protein kinase; ATR subfamily protein kinase; PIKK family protein kinase
PIKK family protein kinase; phosphatidylinositol 3-kinase-related protein kinase; protein kinase, Atypical group
RNA recognition motif RNP-1 domain-containing protein
hypothetical protein; hypothetical protein
eukaryotic translation initiation factor 3, subunit 12
Q9Z765 Preprotein translocase secA subunit
signal recognition particle 72 kDa subunit
UBP-type zinc finger-containing protein; peptidase C19 family protein; hypothetical protein
deubiquitinating enzyme; peptidase C19 family protein
paramecium surface antigen repeat-containing protein
Q86SQ9 Dehydrodolichyl diphosphate synthase (EC 2.5.1.-) (Dedol-PP synthase)
U3 small nucleolar ribonucleoprotein; Nrap family protein
U3 small nucleolar ribonucleoprotein; U3 snoRNP protein
immunoglobulin E-set domain-containing protein
Similar to Dictyostelium discoideum (Slime mold). hypothetical 97.7 kDa protein
peroxisomal multifunctional enzyme MFE homolog
esterase/lipase/thioesterase domain-containing protein
Similar to Dictyostelium discoideum (Slime mold). glycoprotein 24A
glyoxylase II; beta-lactamase domain-containing protein
glyoxylase II; hydroxyacylglutathione hydrolase
beta-lactamase domain-containing protein
RNA-binding region RNP-1 domain-containing protein
RNA recognition motif-containing protein RRM; hypothetical protein
RNA recognition motif-containing protein RRM
Similar to Lactococcus lactis (Subsp. lactis) (Streptococcus lactis). Oxidoreductase
hypothetical protein; citron-like domain-containing protein; hypothetical protein
RNA polymerase I core subunit; RNA polymerase III core subunit
RNA polymerase II core subunit; RNA polymerase III core subunit
Q15404 Ras suppressor protein 1 (Rsu-1) (RSP-1)
oxysterol binding family protein, member 12
SAP DNA-binding domain-containing protein
Maltose O-acetyltransferase (EC 2.3.1.79)
glutamate-rich WD repeat-containing protein 1
5'3'-exonuclease N- and I-domain-containing protein
GATA zinc finger domain-containing protein 16
RGS domain-containing protein; leucine-rich repeat-containing protein; RhoGAP domain-containing protein; protein kinase, TKL group; tyrosine kinase-like protein; ROCO family protein kinase; Similar to LRR
Similar to LRR; RGS domain-containing protein; ROCO family protein kinase; RhoGAP domain-containing protein; leucine-rich repeat-containing protein; protein kinase, TKL group; tyrosine kinase-like protein
cyclophilin-type peptidylprolyl cis-trans isomerase
structural maintenance of chromosome protein
dolichyl-diphosphooligosaccharide-protein glycotransferase
proteasome component region PCI domain-containing protein
COP9 signalosome complex subunit 3; Similar to PINT
Similar to PINT; proteasome component region PCI domain-containing protein
glutathione-dependent formaldehyde-activating, GFA family protein
RhoGAP domain-containing protein; C2 calcium/lipid-binding region-containing protein; pleckstrin homology (PH) domain-containing protein; Similar to CaLB
pleckstrin homology (PH) domain-containing protein; Similar to CaLB; RhoGAP domain-containing protein
C2 calcium/lipid-binding region-containing protein
NADH dehydrogenase ubiquinone 1, alpha/beta subcomplex; NADH-ubiquinone oxidoreductase
NADH-ubiquinone oxidoreductase; acyl carrier protein
NADH dehydrogenase ubiquinone 1, alpha/beta subcomplex
PARP-type zinc finger-containing protein; uracil-DNA glycosylase family protein
SMAD/FHA domain-containing protein; uracil-DNA glycosylase family protein
PARP-type zinc finger-containing protein
Retrotransposable element Tdd-3, complete sequence
Similar to plasmodium falciparum (Isolate 3D7). hypothetical 98.3 kDa protein
serine carboxypeptidase; carboxypeptidase C
peptidase S10 family protein; serine carboxypeptidase
N-acetylglutamate synthetase; ornithine transacetylase
amino-acid N-acetyltransferase; ornithine transacetylase
RNA recognition motif-containing protein RRM; CCHC-type zinc finger-containing protein
RNA recognition motif-containing protein RRM; RNA-binding region RNP-1 domain-containing protein
CCHC-type zinc finger-containing protein
phospholipid/glycerol acyltransferase domain-containing protein
endothelial monocyte-activating polypeptide II precursor pro-EMAP II family protein
RhoGEF domain-containing protein; FYVE-type zinc finger-containing protein; pleckstrin homology (PH) domain-containing protein
pleckstrin homology (PH) domain-containing protein; RhoGEF domain-containing protein
FYVE-type zinc finger-containing protein
RhoGEF domain-containing protein; SH3 domain-containing protein; RhoGAP domain-containing protein; pleckstrin homology (PH) domain-containing protein
pleckstrin homology (PH) domain-containing protein; RhoGEF domain-containing protein; SH3 domain-containing protein
endoplasmic reticulum-golgi intermediate compartment protein 3
hypothetical protein; cyclin-like F-box containing protein
psi factor; PA14 domain-containing protein
prespore-cell-inducing factor; psi factor
ubiquitin protein ligase E3 component n-recognin 7
Graves disease carrier family protein; hypothetical protein
DOCK family protein; hypothetical protein
G-protein-coupled receptor family protein
frizzled and smoothened-like sans CRD protein; Similar to GPCR
Similar to GPCR; frizzled and smoothened-like sans CRD protein
fimbrin-related protein; fimbrin-related actin binding protein; calponin homology (CH) domain-containing protein
calponin homology (CH) domain-containing protein; fimbrin-related actin binding protein; fimbrin-related protein
farnesyl-diphosphate farnesyltransferase
ATP-dependent DNA helicase RecQ family protein
multi antimicrobial extrusion family protein
Arf GTPase activating protein; protein kinase, Atypical group; Alpha kinase family protein
Arf GTPase activating protein; protein kinase, Atypical group
vacuolar protein sorting-associated protein 26 family protein
bromodomain-containing protein; transcription initiation factor TFIID subunit; TFIID subunit; protein kinase, Atypical group; TAF1 family protein kinase; HAF group protein
TAF1 family protein kinase; TFIID subunit; bromodomain-containing protein; protein kinase, Atypical group; transcription initiation factor TFIID subunit
Similar to Pseudomonas putida KT2440. glutamine amidotransferase, class I
Similar to sentrin/SUMO-specific protease
Similar to Homo sapiens (Human). DEAD/DEXH helicase DDX31
DEAD/DEAH box helicase domain-containing protein; CHR group protein; helicase, C-terminal domain-containing protein
DEAD/DEAH box helicase domain-containing protein; SNF2-related domain-containing protein; helicase, C-terminal domain-containing protein
protein kinase, CK1 group; TTBK family protein kinase; hypothetical protein; hypothetical protein
protein kinase, CAMK group; CAMKL family protein kinase; MARK subfamily protein kinase
MARK subfamily protein kinase; protein kinase, CAMK group
RhoGEF domain-containing protein; Rac guanyl-nucleotide exchange factor; unconventional myosin heavy chain; pleckstrin homology (PH) domain-containing protein
pleckstrin homology (PH) domain-containing protein; RhoGEF domain-containing protein; calmodulin-binding protein; unconventional myosin heavy chain
peptidoglycan-binding LysM domain-containing protein
peptidase M3A and M3B domain-containing protein
tetratricopeptide-like helical domain-containing protein
stress-induced-phosphoprotein 1; Similar to TPR
Similar to TPR; tetratricopeptide-like helical domain-containing protein
CCCH-type zinc finger-containing protein
cation transporter; hypothetical protein
tetratricopeptide-like helical domain-containing protein; Similar to TPR
MaoC-like dehydratase domain-containing protein
carbohydrate/purine kinase domain-containing protein
CDK family protein kinase; protein kinase, CMGC group
Hypothetical Generic methyl-transferase/SAM
N-acylpeptide hydrolase; acylamino-acid-releasing enzyme
26S protease regulatory subunit 8; HIV TAT binding-protein-related
26S proteasome subunit ATPase 5; HIV TAT binding-protein-related
DiGeorge syndrome critical region 14-like protein
protein serine/threonine kinase; ULK family protein kinase
autophagy protein 1; protein serine/threonine kinase
cofilin/tropomyosin type actin binding domain-containing protein
heat shock protein Hsp20 domain-containing protein
glucose/ribitol dehydrogenase family protein
regulator of chromosome condensation domain-containing protein
inositol 1,4,5-trisphosphate receptor-like protein
retention in endoplasmic reticulum 1 homolog
DNA-formamidopyrimidine glycosylase; mutM homolog
mutM homolog; DNA-formamidopyrimidine glycosylase
transcription initiation factor TFIID subunit
hypothetical protein; CAMK1 family protein kinase; protein kinase, CAMK group; hypothetical protein
mRNA splicing factor, Cwf18 family protein
calponin homology (CH) domain-containing protein
hypothetical protein; BUB family protein kinase
ATP synthase mitochondrial F1 complex assembly factor 2
tRNA-dihydrouridine synthase 3-like protein
trafficking protein particle complex subunit 2-like protein
Multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase
hypothetical protein; PEK family protein kinase
armadillo-like helical domain-containing protein
peroxin 6; peroxisomal biogenesis factor 6
transcription factor jumonji, jmjC domain-containing protein
acid N-acylsphingosine amidohydrolase-like protein
phosphoinositide-specific phospholipase C
patatin family protein; pleckstrin homology (PH) domain-containing protein
pleckstrin homology (PH) domain-containing protein
dilute domain-containing protein; Similar to CaLB
Similar to CaLB; dilute domain-containing protein
type A von Willebrand factor domain-containing protein
vault protein inter-alpha-trypsin domain-containing protein; Similar to VWFA; Similar to VIT
Similar to VWFA; Similar to VIT; vault protein inter-alpha-trypsin domain-containing protein
actin related protein 2/3 complex, subunit 3
actin related protein 2/3 complex, 21 kDa subunit
P38961 Hypothetical 47.2 kDa protein in STN1-AFR1 intergenic region
sugar transporter family protein; solute carrier family 2 member protein
solute carrier family 2 member protein; sugar transporter family protein
Zim17-type zinc finger-containing protein
transmembrane protein; peroxin 13; peroxisomal biogenesis factor 13
peroxin 13; peroxisomal biogenesis factor 13; transmembrane protein
chaperonin containing TCP1 delta subunit
GNS1/SUR4 family protein; fatty acid elongase ELO
fatty acid elongase ELO; long chain fatty acid elongase
DNAJ heat shock N-terminal domain-containing protein
diphthamide biosynthesis protein 4; zinc finger, DPH-type domain-containing protein
SNF2-related protein; ATP-dependent chromatin-remodelling factor; CHR group protein; helicase, C-terminal domain-containing protein
CHR group protein; SNF2-related protein; helicase, C-terminal domain-containing protein; myb domain-containing protein
ATP-dependent chromatin-remodelling factor
mannosyl-oligosaccharide 1,2-alpha-mannosidase
phosphatase tensin type domain-containing protein
C2 tensin-type domain-containing protein
SNF2-related domain-containing protein; CHR group protein; helicase, C-terminal domain-containing protein; Similar to CHRomatin Organization MOdifier
Similar to CHRomatin Organization MOdifier; SNF2-related domain-containing protein; chromo domain-containing protein; helicase, C-terminal domain-containing protein
isoleucine-tRNA ligase; isoleucyl-tRNA synthetase, mitochondrial; isoleucine-tRNA ligase, mitochondrial
isoleucine-tRNA ligase, mitochondrial; isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase, mitochondrial
eukaryotic translation initiation factor 3 subunit 6; eIF-3 p48; Similar to PINT; Similar to eIF3
Similar to PINT; Similar to eIF3; eukaryotic translation initiation factor 3 subunit 6; proteasome component region PCI domain-containing protein
TROVE domain-containing protein; NACHT domain-containing protein; telomerase-associated protein 1-like protein; Similar to TEP1
Similar to TEP1; TROVE domain-containing protein; WD40 repeat-containing protein; telomerase-associated protein 1-like protein
NADH:flavin oxidoreductase/NADH oxidase domain-containing protein
RhoGAP domain-containing protein; protein kinase, STE group
RhoGEF domain-containing protein; DH domain-containing protein; PH domain-containing protein; protein kinase, STE group
PH domain-containing protein; RhoGEF domain-containing protein; protein kinase, STE group
RhoGEF domain-containing protein; armadillo repeat-containing protein; pleckstrin homology (PH) domain-containing protein
pleckstrin homology (PH) domain-containing protein; armadillo repeat-containing protein
peroxisomal biogenesis factor 14; peroxin 14
peroxisomal biogenesis factor 14; transmembrane protein
eukaryotic translation initiation factor 3 subunit 5; eIF-3 epsilon; Similar to eIF3
Similar to eIF3; eIF-3 epsilon; eukaryotic translation initiation factor 3 subunit 5
N-acetyltransferase, non-catalytic subunit
general transcription factor IIH, polypeptide 4
Ras GTPase domain-containing protein; GPN-loop GTPase 1
GPN-loop GTPase 1; Ras GTPase domain-containing protein
protein kinase, AGC group; MAST family protein kinase
metallophosphoesterase domain-containing protein; hypothetical protein
metallophosphoesterase domain-containing protein
TRAF-type zinc finger-containing protein
meprin and TRAF homology (MATH) domain-containing protein
Similar to Boophilus microplus (Cattle tick). notch-like protein
UBA/THIF-type NAD/FAD binding fold-containing protein
RhoGEF domain-containing protein; IQ calmodulin-binding domain-containing protein; pleckstrin homology (PH) domain-containing protein
IQ calmodulin-binding domain-containing protein
Similar to unknown protein YycE of Bacillus subtilis
Similar to Plasmodium falciparum (Isolate 3D7). Hypothetical 111.5 kDa protein
annotated by transcript or proteomic data, translated product replaced
peptidase M8, leishmanolysin family protein
beta-lactamase-like domain-containing protein
RhoGEF domain-containing protein; pleckstrin homology (PH) domain-containing protein
Similar to Dictyostelium discoideum (Slime mold). hypothetical 127.0 kDa protein
U3 snoRNP protein; U3 small nucleolar ribonucleoprotein
U3 snoRNP protein; WD40 repeat-containing protein
tRNA nucleotidyltransferase (EC 2.7.7.25)
splicing factor 1; CCHC-type zinc finger-containing protein; K homology (KH), type 1 domain containing-protein
K homology (KH), type 1 domain containing-protein; splicing factor 1
mitochondrial carnitine/acylcarnitine carrier protein; hypothetical protein
mitochondrial carnitine/acylcarnitine carrier protein
RNA recognition motif-containing protein RRM; polyadenylate binding protein; Similar to PABP
Similar to PABP; RNA-binding region RNP-1 domain-containing protein; polyadenylate binding protein
RNA polymerase I, second largest subunit
2-oxoglutarate and Fe-dependent oxygenase family protein
longin domain-containing protein; v-SNARE family protein
synaptobrevin domain-containing protein; v-SNARE family protein
neutral/alkaline nonlysosomal ceramidase family protein
NF-X1-type zinc finger-containing protein
short-chain dehydrogenase/reductase family protein
cellular retinaldehyde-binding/triple function domain-containing protein
cellular retinaldehyde binding/alpha-tocopherol transport family protein
LMBR1-like conserved region-containing protein
TIM beta/alpha-barrel domain-containing protein
ricin B lectin domain-containing protein
Fumarylacetoacetate hydrolase domain-containing protein
protein kinase, CAMK group; RAD53 family protein kinase; FHA domain-containing protein
RAD53 family protein kinase; protein kinase, CAMK group
terpenoid synthase domain-containing protein
P36415 Heat shock cognate protein (Aginactin)
signal transducer and activator of transcription family protein; Similar to STAT
Similar to STAT; transcriptional repressor
signal transducer and activator of transcription family protein
DYRK family protein kinase; protein kinase, CMGC group
26S proteasome non-ATPase regulatory subunit 2
BTB/POZ domain-containing protein; Similar to RCC1
Similar to RCC1; regulator of chromosome condensation domain-containing protein
carbohydrate-binding domain-containing protein
7,8-dihydro-8-oxoguanine triphosphatase; mutT homolog
mutT homolog; NUDIX hydrolase family protein
hypothetical protein; alternatively spliced
bromodomain-containing protein; BTB/POZ domain-containing protein; protein kinase, Atypical group; BRD family protein kinase; GTE group protein
BTB/POZ domain-containing protein; GTE group protein; ankyrin repeat-containing protein; bromodomain-containing protein; protein kinase, Atypical group
COP9 signalosome complex subunit 4; Similar to PINT
isocitrate dehydrogenase (NAD+) beta subunit; Similar to NAD+; Similar to NAD+
Similar to NAD+; Similar to NAD+; isocitrate dehydrogenase (NAD+) beta subunit
IQ calmodulin-binding domain-containing protein; villin headpiece domain-containing protein; calponin homology (CH) domain-containing protein; Similar to VHP
calponin homology (CH) domain-containing protein; Similar to VHP; RhoGEF domain-containing protein; villin headpiece domain-containing protein
STE20 family protein kinase; protein kinase, STE group; PAKL subfamily protein kinase
non-SMC condensin II complex, subunit D1
peptidase M28E domain containing-protein
Similar to Mus musculus (Mouse). GABA-A receptor epsilon-like subunit