Thamnophis elegans isolate rThaEle1 chromosome 17, rThaEle1.pri, whole genome shotgun sequence.
type: Entry
definition: Thamnophis elegans isolate rThaEle1 chromosome 17, rThaEle1.pri, whole genome shotgun sequence.
sequence version: NC_045557.1
sequence date: 2020-01-31
sequence: sequence
division: CON
label: NC_045557.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA602516
dblink: SAMN12629499
keyword: WGS
keyword: RefSeq
source: Thamnophis elegans (Western terrestrial garter snake)
organism: Thamnophis elegans
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Natricinae; Thamnophis.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM020112.1.\nAssembly name: rThaEle1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2019/12/23. The original whole-genome shotgun project has the\naccession WNNA00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 20-AUG-2019\nAssembly Method :: FALCON v. DNANexus 1.9.0; FALCON-Unzip v.\n DNANexus 1.0.6; purge_haplotigs v.\n v1.0.3+ 1.Nov.2018; scaff10x v. 4.1.0;\n Bionano Solve DLS v. 3.2.1; Salsa HiC v.\n 2.2; Arrow smrtanalysis Pacbio polishSing\n & gap filling v. 6.0.0.47841; longranger\n align v. 2.2.2; freebayes Illumina\n polishing v. 1.3.1; gEVAL manual curation\n v. 2019-08-20; VGP assembly pipeline\n individual v. 1.5\nAssembly Name :: rThaEle1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 62.12x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Thamnophis elegans Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 17174197
topology: linear
so has quality: SO_0000987
location: 1..17174197
location: region:1-17174197:1
RO_0002162: 35005

NC_045557
type: RefSeq
SIO_000068: refseq

PRJNA602516
type: BioProject
SIO_000068: bioproject

SAMN12629499
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17174197:1
position: 17174197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-17174197:1:source
so part of: sequence
organism: Thamnophis elegans
mol type: genomic DNA
isolate: rThaEle1
chromosome: 17
sex: female
tissue type: blood
dev stage: juvenile
country: USA: Born in Anne Bronikowsk lab at ISU; MOM, 2012; Eagle Lake; PAP
lat lon: 42.02482 N 93.64411 W
collection date: 01-Apr-2018
collected by: Anne Bronikowski

35005
type: Taxonomy
SIO_000068: taxonomy

PC
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: PC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1611..112140)
location: region:1611-112140:-1
so has part: feature:1611-112140:-1:exon
subclass of: SO_0000010

116519796
type: Gene
SIO_000068: ncbigene

position:1611:-1
position: 1611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112140:-1
position: 112140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1611-112140:-1:exon

PC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: PC
product: pyruvate carboxylase
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032233835.1
SIO_010081: PC
subclass of: SO_0000673
so part of: PC
location: complement(join(1611..2694,3036..3176,3829..4074,4413..4592,5115..5359,6534..6783,7141..7381,7713..7869,14064..14285,20520..20609,21052..21196,56473..56655,73815..73976,80710..80828,81297..81448,82566..82672,82985..83148,87317..87483,90023..90207,90457..90595,111997..112140))
location: region:1611-112140:-1
so has part: feature:111997-112140:-1:exon
so has part: feature:90457-90595:-1:exon
so has part: feature:90023-90207:-1:exon
so has part: feature:87317-87483:-1:exon
so has part: feature:82985-83148:-1:exon
so has part: feature:82566-82672:-1:exon
so has part: feature:81297-81448:-1:exon
so has part: feature:80710-80828:-1:exon
so has part: feature:73815-73976:-1:exon
so has part: feature:56473-56655:-1:exon
so has part: feature:21052-21196:-1:exon
so has part: feature:20520-20609:-1:exon
so has part: feature:14064-14285:-1:exon
so has part: feature:7713-7869:-1:exon
so has part: feature:7141-7381:-1:exon
so has part: feature:6534-6783:-1:exon
so has part: feature:5115-5359:-1:exon
so has part: feature:4413-4592:-1:exon
so has part: feature:3829-4074:-1:exon
so has part: feature:3036-3176:-1:exon
so has part: feature:1611-2694:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:111997-112140:-1:exon

position:111997:-1
position: 111997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:90457-90595:-1:exon

position:90457:-1
position: 90457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90595:-1
position: 90595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:90023-90207:-1:exon

position:90023:-1
position: 90023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90207:-1
position: 90207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:87317-87483:-1:exon

position:87317:-1
position: 87317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87483:-1
position: 87483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:82985-83148:-1:exon

position:82985:-1
position: 82985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83148:-1
position: 83148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:82566-82672:-1:exon

position:82566:-1
position: 82566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82672:-1
position: 82672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:81297-81448:-1:exon

position:81297:-1
position: 81297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81448:-1
position: 81448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:80710-80828:-1:exon

position:80710:-1
position: 80710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80828:-1
position: 80828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:73815-73976:-1:exon

position:73815:-1
position: 73815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73976:-1
position: 73976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:56473-56655:-1:exon

position:56473:-1
position: 56473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56655:-1
position: 56655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:21052-21196:-1:exon

position:21052:-1
position: 21052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21196:-1
position: 21196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:20520-20609:-1:exon

position:20520:-1
position: 20520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20609:-1
position: 20609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:14064-14285:-1:exon

position:14064:-1
position: 14064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14285:-1
position: 14285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7713-7869:-1:exon

position:7713:-1
position: 7713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7869:-1
position: 7869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7141-7381:-1:exon

position:7141:-1
position: 7141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7381:-1
position: 7381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6534-6783:-1:exon

position:6534:-1
position: 6534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6783:-1
position: 6783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:5115-5359:-1:exon

position:5115:-1
position: 5115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5359:-1
position: 5359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4413-4592:-1:exon

position:4413:-1
position: 4413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4592:-1
position: 4592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3829-4074:-1:exon

position:3829:-1
position: 3829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4074:-1
position: 4074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3036-3176:-1:exon

position:3036:-1
position: 3036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3176:-1
position: 3176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1611-2694:-1:exon

position:2694:-1
position: 2694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: PC
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: pyruvate carboxylase, mitochondrial
translation: MQFKKQQSLNIKQGRSLVLWWRFQARSQETVSSGPALGLKGSWMLLQLPCAKGRMPFLALRHLFRHPAAFLSTPRVEYKPIQKVMVANRGEIAIRVFRACTELGIRTVAVYSEQDTGQMHRQKADEAYLIGRGLPPVQAYLHIPDIIKVAKDNAVDAIHPGYGFLSERADFAKACLEAGVRFIGPSPEVVRKMGDKVEARAIAISAGVPVVPGTDAPISSLNEAQEFSQAYGFPIIFKAAYGGGGRGMRVVRSYEVGRVAQELTRAFSEALSAFGNGALFVEKFVEKPRHIEVQILGDKHGNVLHLYERDCSIQRRHQKVVEIAPAAHLDSQLRSKLTADAVRLAKQVGYENAGTVEFLLDKHGKHYFIEVNSRLQVEHTVTEEITDVDLVHAQXHIAEGKSLPELGLKQENVRINGCAIQCRVTTEDPARGFQPDTGRIEVFRSGEGMGIRLDSASAFQGAIISPHYDSLLVKVIAHGKDHPTAASKMSRALAEFRIRGVKTNIPFLQNVLSNDQFLHGTVDTQFIDENPDLFHLRPGQNRAQKLLHYLGHVMVNGPTTPIPVKAQPSPIDPLVPAVPLGQPPDGFRDVLLREGPAGFAKAIRQHQGLLLMDTTFRDAHQSLLATRVRTHDLKKIAPFVAHNFSRLFSIENWGGATFDVAMRFLYECPWQRLQELRELIPNVPFQMLLRGANAVGYTNYPDNSVFKFCEMARENGMDIFRVFDSLNYLPNMLLGMEAAGQAGGVVEAAISYTGDVADPSRTKYTLDYYLSLAEQLVKAGTHILAIKDMAGVLKPQASSLLVGALRKQFPDVPLHIHTHDTSGAGVASMLACAAAGADIVDVAVDSMSGMTSQPSMGAMVACTRGTEHDTGIQMQKVFDYSEYWEVARGLYAAFDCTATMKSGNADVYENEIPGGQYTNLHFQAHSMGLGHKFKEVKKAYVEANKLLGDLIKVTPSSKIVGDLAQFMVQNNLTQEDVEAQADELSFPQSVVEFLQGYIGIPHGGFPEPLRSKVLKDLPRVEGRPGASLPPLDFAKLEQELCEKHEEITPEDVLSAAMYPKVFSDFKDFTASFGPVECLNTRLFLEGPKIAEEFEVELERGKTLHIKALALGDLNRAGQREVFFELNGQLRSILVKDTKAMKEMHFHPKALKDVKGQVGAPMPGKVIDIKVKEGGQVEKGHPLCVLSAMKMETVVNSPMSGTVKKIYVKSEMSLEGDDLILEIE
SIO_010081: PC
subclass of: SO_0000673
so part of: PC
location: complement(join(2446..2694,3036..3176,3829..4074,4413..4592,5115..5359,6534..6783,7141..7381,7713..7869,14064..14285,20520..20609,21052..21196,56473..56655,73815..73976,80710..80828,81297..81448,82566..82672,82985..83148,87317..87483,90023..90207,90457..90595,111997..112125))
location: region:2446-112125:-1
so has part: feature:111997-112125:-1:exon
so has part: feature:90457-90595:-1:exon
so has part: feature:90023-90207:-1:exon
so has part: feature:87317-87483:-1:exon
so has part: feature:82985-83148:-1:exon
so has part: feature:82566-82672:-1:exon
so has part: feature:81297-81448:-1:exon
so has part: feature:80710-80828:-1:exon
so has part: feature:73815-73976:-1:exon
so has part: feature:56473-56655:-1:exon
so has part: feature:21052-21196:-1:exon
so has part: feature:20520-20609:-1:exon
so has part: feature:14064-14285:-1:exon
so has part: feature:7713-7869:-1:exon
so has part: feature:7141-7381:-1:exon
so has part: feature:6534-6783:-1:exon
so has part: feature:5115-5359:-1:exon
so has part: feature:4413-4592:-1:exon
so has part: feature:3829-4074:-1:exon
so has part: feature:3036-3176:-1:exon
so has part: feature:2446-2694:-1:exon

XP_032089726.1
type: Protein
SIO_000068: ncbiprotein

position:2446:-1
position: 2446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112125:-1
position: 112125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111997-112125:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:90457-90595:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:90023-90207:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:87317-87483:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:82985-83148:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:82566-82672:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:81297-81448:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:80710-80828:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:73815-73976:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:56473-56655:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:21052-21196:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:20520-20609:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14064-14285:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7713-7869:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7141-7381:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6534-6783:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5115-5359:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4413-4592:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3829-4074:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3036-3176:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2446-2694:-1:exon

LRFN4
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: LRFN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 36221..45971
location: region:36221-45971:1
so has part: feature:36221-45971:1:exon
subclass of: SO_0000010

116519797
type: Gene
SIO_000068: ncbigene

position:36221:1
position: 36221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45971:1
position: 45971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36221-45971:1:exon

LRFN4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: LRFN4
product: leucine rich repeat and fibronectin type III domain containing 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032233836.1
SIO_010081: LRFN4
subclass of: SO_0000673
so part of: LRFN4
location: join(36221..41888,43161..45971)
location: region:36221-45971:1
so has part: feature:36221-41888:1:exon
so has part: feature:43161-45971:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:36221-41888:1:exon

position:41888:1
position: 41888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:43161-45971:1:exon

position:43161:1
position: 43161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LRFN4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: LRFN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and fibronectin type-III domain-containing protein 4
translation: MEQATSRGGQVGRTKSYQSSADLFFSLAGPAKATTMERLLLIQLLMVGSTVAQVESCPFHCVCQNLSDSLSTLCANKGLLFIPVNIDRRTVELRLADNFIRVVEAPDFLNMTGLVDLTLSRNTIDTLRPFAFGDLESLRSLHLDSNRLMEIREEALRGMLNLQHLILSNNQLVNISGAAFDDFLSTLEDLDLSYNNLRRVPWEGIQGMLCLHTLNLDHNLIDFIMEGTFDELYKLSRLDMTSNRLSTLPPDPLFARSQIGAISPTPYMATIMLSFGGNPLHCNCELLWLRRLAREDDMETCASPQHVAGRYFWSVPEEDFTCEPPLITRHTHKLWILEGQRATLRCRALGDPEPVIHWVSPDDKIIANSSRTVSFRNGTLDLLVTTIRDDGAYTCIAINAAGESTATVDLKIIPLPHRGNGSITVLQQDPGSSDIATSAKNSANATQEASEKRVEVLGVTATSALVRWQADKSTYVAWMYQIQYNCTADDALVYRIIPASSQDFLLKHLVPSMDYDLCVLAIFDDLATSLAATHLLGCAQFTTQEAYPDCHSLHVHFLGGALTVTVGGIIVASLLVFTGVMMVKYKVCGSVHGSLPRVSNVHSQTNGGHPNGLLPQRTSPAECQHGQAKSAERRMGGARRGALVSAKARRSNSLDMGDASSSACYSYAKRLSFMWAKRSQSVHGRLAQGTPLEDSTSTQPGPFLNVDKLEESVV
SIO_010081: LRFN4
subclass of: SO_0000673
so part of: LRFN4
location: join(40405..41888,43161..43821)
location: region:40405-43821:1
so has part: feature:40405-41888:1:exon
so has part: feature:43161-43821:1:exon

XP_032089727.1
type: Protein
SIO_000068: ncbiprotein

position:40405:1
position: 40405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43821:1
position: 43821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40405-41888:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:43161-43821:1:exon

LOC116519799
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: LOC116519799
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(134151..136499)
location: region:134151-136499:-1
so has part: feature:134151-136499:-1:exon
subclass of: SO_0000011

116519799
type: Gene
SIO_000068: ncbigene

position:134151:-1
position: 134151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136499:-1
position: 136499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134151-136499:-1:exon

LOC116519799
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 35005
nc RNA class: lncRNA
gene: LOC116519799
product: uncharacterized LOC116519799
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_004256688.1
SIO_010081: LOC116519799
subclass of: SO_0000673
so part of: LOC116519799
location: complement(join(134151..134952,135083..136499))
location: region:134151-136499:-1
so has part: feature:135083-136499:-1:exon
so has part: feature:134151-134952:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:135083-136499:-1:exon

position:135083:-1
position: 135083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:134151-134952:-1:exon

position:134952:-1
position: 134952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BCAN
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: BCAN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 160935..179757
location: region:160935-179757:1
so has part: feature:160935-179757:1:exon
subclass of: SO_0000010

116520093
type: Gene
SIO_000068: ncbigene

position:160935:1
position: 160935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179757:1
position: 179757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160935-179757:1:exon

BCAN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: BCAN
product: brevican
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 49 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032234247.1
SIO_010081: BCAN
subclass of: SO_0000673
so part of: BCAN
location: join(160935..161025,161511..161903,163547..163721,165374..165501,166043..166336,167375..167692,169966..170841,174165..174272,176532..176690,177437..177519,178097..178241,178779..179757)
location: region:160935-179757:1
so has part: feature:160935-161025:1:exon
so has part: feature:161511-161903:1:exon
so has part: feature:163547-163721:1:exon
so has part: feature:165374-165501:1:exon
so has part: feature:166043-166336:1:exon
so has part: feature:167375-167692:1:exon
so has part: feature:169966-170841:1:exon
so has part: feature:174165-174272:1:exon
so has part: feature:176532-176690:1:exon
so has part: feature:177437-177519:1:exon
so has part: feature:178097-178241:1:exon
so has part: feature:178779-179757:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:160935-161025:1:exon

position:161025:1
position: 161025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:161511-161903:1:exon

position:161511:1
position: 161511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161903:1
position: 161903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:163547-163721:1:exon

position:163547:1
position: 163547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163721:1
position: 163721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:165374-165501:1:exon

position:165374:1
position: 165374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165501:1
position: 165501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:166043-166336:1:exon

position:166043:1
position: 166043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166336:1
position: 166336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:167375-167692:1:exon

position:167375:1
position: 167375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167692:1
position: 167692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:169966-170841:1:exon

position:169966:1
position: 169966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170841:1
position: 170841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:174165-174272:1:exon

position:174165:1
position: 174165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174272:1
position: 174272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:176532-176690:1:exon

position:176532:1
position: 176532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176690:1
position: 176690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:177437-177519:1:exon

position:177437:1
position: 177437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177519:1
position: 177519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:178097-178241:1:exon

position:178097:1
position: 178097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178241:1
position: 178241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:178779-179757:1:exon

position:178779:1
position: 178779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BCAN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: BCAN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: brevican core protein
translation: MAFCRDLLLCAALAQLVSLGAAFHFVRESTDDLKALRVSISKYPPIRAVLSGSLTIPCHITYLQPLPTADTASRHGVRGTLRVKWTFLADGKEAEILVARGLKVKVSEIYRDRVFLPFYPDSPTDATLVLSELRSNDSGLYRCDAQHGIEDGQDSLEVKVKGVVFHYRGGSSRYAYTFPQAQAACARIGAAIATPEQLHAAYRSGYEQCDAGWLADQTVRYPIHAPREACYGDMNGFPGIRNYGVVDPDDTYDVYCYAEELYGDLFVMTSPRKFTWEEAKAACESLRVEMATTGQLYAAWNQGMDHCNPGWLADGSVRYPIVTPREKCGGNMPGVKTLFLFRNQTGFPDPQSKFDVFCFREETSPSLESPVPEAEGSKEITTVTQKMEELQLPEREPEVAKESRGAIYSVPLLQDPLGVPEEPSKAFEEAATPEPQEVVTGSCDRRSGGQEEREERGGSCDRRHGPEREPSVGPSTEEALRTQKAPTPDLRQQRENGEPEVLEAAPHEGEAEDGEARDEKAPHGVHSPVEPSWETAASFSPSPEGETVGKVPQGPSVSPSEAATERTPSASHASRPPEEAGAGTSSARRVESSPISGPAVPRHPSPPREAGAEPPGTSAFPGTPPVLLLLPSLSMTPAGSPEESGDHSGSSWPPPAGLSPVAVSSPPDEAAAAASKASAGLDESKEEPWAEASEPELTLRTTVPAAGKGGHPEAVPSGGPLGLNFFSTPFLEASLTTTHPRPVLPTESASLGASGSVSDTCVPNPCRNGGTCTEGRGRPGCLCLPGYGGDACNVSLRKCQPGWDAFQGFCYKHFSARRSWEDAETRCREHGGHLANIMSPEEQSFINNQYKEYQWIGLNDRTIEGDFQWSDGSPLLYENWHNGQPDSHFLYGENCVGLSWRKDGKWSDVPCGYHLPFTCKMGLISCSSPPKVADAQIFGKPKQRYEVNSVLRYWCPEGFLQHRWPLIRCQENGQWQQPQFACSPPES
SIO_010081: BCAN
subclass of: SO_0000673
so part of: BCAN
location: join(160935..161025,161511..161903,163547..163721,165374..165501,166043..166336,167375..167692,169966..170841,174165..174272,176532..176690,177437..177519,178097..178241,178779..178972)
location: region:160935-178972:1
so has part: feature:160935-161025:1:exon
so has part: feature:161511-161903:1:exon
so has part: feature:163547-163721:1:exon
so has part: feature:165374-165501:1:exon
so has part: feature:166043-166336:1:exon
so has part: feature:167375-167692:1:exon
so has part: feature:169966-170841:1:exon
so has part: feature:174165-174272:1:exon
so has part: feature:176532-176690:1:exon
so has part: feature:177437-177519:1:exon
so has part: feature:178097-178241:1:exon
so has part: feature:178779-178972:1:exon

XP_032090138.1
type: Protein
SIO_000068: ncbiprotein

position:178972:1
position: 178972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160935-161025:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:161511-161903:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:163547-163721:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:165374-165501:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:166043-166336:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:167375-167692:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:169966-170841:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:174165-174272:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:176532-176690:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:177437-177519:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:178097-178241:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:178779-178972:1:exon

HAPLN2
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: HAPLN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(180372..190870)
location: region:180372-190870:-1
so has part: feature:180372-190870:-1:exon
subclass of: SO_0000010

116520286
type: Gene
SIO_000068: ncbigene

position:180372:-1
position: 180372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190870:-1
position: 190870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180372-190870:-1:exon

HAPLN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: HAPLN2
product: hyaluronan and proteoglycan link protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032234451.1
SIO_010081: HAPLN2
subclass of: SO_0000673
so part of: HAPLN2
location: complement(join(180372..180971,181741..181926,183193..183309,183749..184102,184415..184535,190720..190870))
location: region:180372-190870:-1
so has part: feature:190720-190870:-1:exon
so has part: feature:184415-184535:-1:exon
so has part: feature:183749-184102:-1:exon
so has part: feature:183193-183309:-1:exon
so has part: feature:181741-181926:-1:exon
so has part: feature:180372-180971:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:190720-190870:-1:exon

position:190720:-1
position: 190720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:184415-184535:-1:exon

position:184415:-1
position: 184415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184535:-1
position: 184535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:183749-184102:-1:exon

position:183749:-1
position: 183749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184102:-1
position: 184102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:183193-183309:-1:exon

position:183193:-1
position: 183193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183309:-1
position: 183309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:181741-181926:-1:exon

position:181741:-1
position: 181741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181926:-1
position: 181926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:180372-180971:-1:exon

position:180971:-1
position: 180971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HAPLN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: HAPLN2
product: hyaluronan and proteoglycan link protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032234450.1
SIO_010081: HAPLN2
subclass of: SO_0000673
so part of: HAPLN2
location: complement(join(180372..180971,181741..181926,183193..183309,183749..184102,184415..184989))
location: region:180372-184989:-1
so has part: feature:184415-184989:-1:exon
so has part: feature:183749-184102:-1:exon
so has part: feature:183193-183309:-1:exon
so has part: feature:181741-181926:-1:exon
so has part: feature:180372-180971:-1:exon

position:184989:-1
position: 184989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184415-184989:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:183749-184102:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:183193-183309:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:181741-181926:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:180372-180971:-1:exon

HAPLN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: HAPLN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hyaluronan and proteoglycan link protein 2
translation: MPLLLLLVSLCLSSAPGVPAIYQRPSGTQPATPAPLQYLLEPTNKIVQARRGASVTLPCILWVVPQNYKIRWSKVEPTEYLEVAILISNGVHHKTYGPLGSRSHLKRSHRYDASLTISNLTLDDEGRYRCQLVNGLEDESVSLVLHLEGVVFPYQTSQGRYQFNYFGAQKACQEQDARLATYQQLYQAWTEGLDWCNAGWVMEGSVHYPIRNSRKPCGGLLLRPGVRTYGPKDKLKDRFDAFCFTSSGQGRVYFIRGHFSFKEGLQSCHNDGATLAKVGQLYAAWRFSQLDRCNGGWLEDGSVRFPITAPRPHCGGLPDPGVRNFGFPSKLRKKYGVYCFSAK
SIO_010081: HAPLN2
subclass of: SO_0000673
so part of: HAPLN2
location: complement(join(180688..180971,181741..181926,183193..183309,183749..184102,184415..184505))
location: region:180688-184505:-1
so has part: feature:184415-184505:-1:exon
so has part: feature:183749-184102:-1:exon
so has part: feature:183193-183309:-1:exon
so has part: feature:181741-181926:-1:exon
so has part: feature:180688-180971:-1:exon

XP_032090341.1
type: Protein
SIO_000068: ncbiprotein

position:180688:-1
position: 180688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184505:-1
position: 184505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184415-184505:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:183749-184102:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:183193-183309:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:181741-181926:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:180688-180971:-1:exon

HAPLN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: HAPLN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hyaluronan and proteoglycan link protein 2
translation: MPLLLLLVSLCLSSAPGVPAIYQRPSGTQPATPAPLQYLLEPTNKIVQARRGASVTLPCILWVVPQNYKIRWSKVEPTEYLEVAILISNGVHHKTYGPLGSRSHLKRSHRYDASLTISNLTLDDEGRYRCQLVNGLEDESVSLVLHLEGVVFPYQTSQGRYQFNYFGAQKACQEQDARLATYQQLYQAWTEGLDWCNAGWVMEGSVHYPIRNSRKPCGGLLLRPGVRTYGPKDKLKDRFDAFCFTSSGQGRVYFIRGHFSFKEGLQSCHNDGATLAKVGQLYAAWRFSQLDRCNGGWLEDGSVRFPITAPRPHCGGLPDPGVRNFGFPSKLRKKYGVYCFSAK
SIO_010081: HAPLN2
subclass of: SO_0000673
so part of: HAPLN2
location: complement(join(180688..180971,181741..181926,183193..183309,183749..184102,184415..184505))
location: region:180688-184505:-1
so has part: feature:184415-184505:-1:exon
so has part: feature:183749-184102:-1:exon
so has part: feature:183193-183309:-1:exon
so has part: feature:181741-181926:-1:exon
so has part: feature:180688-180971:-1:exon

XP_032090342.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:184415-184505:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:183749-184102:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:183193-183309:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:181741-181926:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:180688-180971:-1:exon

RHBG
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: RHBG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 192056..200595
location: region:192056-200595:1
so has part: feature:192056-200595:1:exon
subclass of: SO_0000010

116519859
type: Gene
SIO_000068: ncbigene

position:192056:1
position: 192056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200595:1
position: 200595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192056-200595:1:exon

RHBG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: RHBG
product: Rh family B glycoprotein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_032233934.1
SIO_010081: RHBG
subclass of: SO_0000673
so part of: RHBG
location: join(192056..192334,194712..194898,195812..195962,196965..197112,197473..197639,198182..198319,198482..198615,198772..198893,199483..199556,200212..200595)
location: region:192056-200595:1
so has part: feature:192056-192334:1:exon
so has part: feature:194712-194898:1:exon
so has part: feature:195812-195962:1:exon
so has part: feature:196965-197112:1:exon
so has part: feature:197473-197639:1:exon
so has part: feature:198182-198319:1:exon
so has part: feature:198482-198615:1:exon
so has part: feature:198772-198893:1:exon
so has part: feature:199483-199556:1:exon
so has part: feature:200212-200595:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:192056-192334:1:exon

position:192334:1
position: 192334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:194712-194898:1:exon

position:194712:1
position: 194712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194898:1
position: 194898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:195812-195962:1:exon

position:195812:1
position: 195812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195962:1
position: 195962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:196965-197112:1:exon

position:196965:1
position: 196965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197112:1
position: 197112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:197473-197639:1:exon

position:197473:1
position: 197473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197639:1
position: 197639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:198182-198319:1:exon

position:198182:1
position: 198182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198319:1
position: 198319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:198482-198615:1:exon

position:198482:1
position: 198482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198615:1
position: 198615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:198772-198893:1:exon

position:198772:1
position: 198772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198893:1
position: 198893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:199483-199556:1:exon

position:199483:1
position: 199483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199556:1
position: 199556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:200212-200595:1:exon

position:200212:1
position: 200212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RHBG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: RHBG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ammonium transporter Rh type B isoform X1
translation: MSGHPTNLRVKLPLLCALLQLATVLLFAFFVQYDSHTSPRLWHEDVQLHSKGPLDHEFYPRYPSFQDVHVMVFLGFGFLMTFLRRYSFGGVAFNFLIAAFALQWSVLIQGFFHTFHNGKIHVGIESMINADFCAGSVLISFGALLGKTSPVQLLLMAGLEVTLFGINEYVLLSLLQVKDAGGSMTIHAFGAYFGLMVSRVLFRPHLDKSRQREGSTYHSDLFAMIGTLFLWVFWPSFNSAVTAHGDDQQRTVMNTYFSLASSTLATFAISALVNHGGQLDMVHIQNAALAGGVIVGTSAEMVLTPFGALIAGCVAGLVATLGFRFLTPILAARLKIQDTCGIHNLHGMPGLLGALLGALLAALATPDAYGEGMADVFPLVAAGQRTPIRQSLFQLLGLLVSLGMATVGGSLVGAILKMRSLAMPPDALCFEDQIYWEVPEEHRDGFQVMEALSTEEADKATHA
SIO_010081: RHBG
subclass of: SO_0000673
so part of: RHBG
location: join(192145..192334,194712..194898,195812..195962,196965..197112,197473..197639,198182..198319,198482..198615,198772..198893,199483..199556,200212..200292)
location: region:192145-200292:1
so has part: feature:192145-192334:1:exon
so has part: feature:194712-194898:1:exon
so has part: feature:195812-195962:1:exon
so has part: feature:196965-197112:1:exon
so has part: feature:197473-197639:1:exon
so has part: feature:198182-198319:1:exon
so has part: feature:198482-198615:1:exon
so has part: feature:198772-198893:1:exon
so has part: feature:199483-199556:1:exon
so has part: feature:200212-200292:1:exon

XP_032089825.1
type: Protein
SIO_000068: ncbiprotein

position:192145:1
position: 192145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200292:1
position: 200292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192145-192334:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:194712-194898:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:195812-195962:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:196965-197112:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:197473-197639:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:198182-198319:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:198482-198615:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:198772-198893:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:199483-199556:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:200212-200292:1:exon

RHBG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: RHBG
product: Rh family B glycoprotein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_032233935.1
SIO_010081: RHBG
subclass of: SO_0000673
so part of: RHBG
location: join(192247..192334,194245..194475,194712..194898,195812..195962,196965..197112,197473..197639,198182..198319,198482..198615,198772..198893,199483..199556,200212..200595)
location: region:192247-200595:1
so has part: feature:192247-192334:1:exon
so has part: feature:194245-194475:1:exon
so has part: feature:194712-194898:1:exon
so has part: feature:195812-195962:1:exon
so has part: feature:196965-197112:1:exon
so has part: feature:197473-197639:1:exon
so has part: feature:198182-198319:1:exon
so has part: feature:198482-198615:1:exon
so has part: feature:198772-198893:1:exon
so has part: feature:199483-199556:1:exon
so has part: feature:200212-200595:1:exon

position:192247:1
position: 192247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192247-192334:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:194245-194475:1:exon

position:194245:1
position: 194245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194475:1
position: 194475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:194712-194898:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:195812-195962:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196965-197112:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:197473-197639:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:198182-198319:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:198482-198615:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:198772-198893:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:199483-199556:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:200212-200595:1:exon

RHBG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: RHBG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ammonium transporter Rh type B isoform X2
translation: MVFLGFGFLMTFLRRYSFGGVAFNFLIAAFALQWSVLIQGFFHTFHNGKIHVGIESMINADFCAGSVLISFGALLGKTSPVQLLLMAGLEVTLFGINEYVLLSLLQVKDAGGSMTIHAFGAYFGLMVSRVLFRPHLDKSRQREGSTYHSDLFAMIGTLFLWVFWPSFNSAVTAHGDDQQRTVMNTYFSLASSTLATFAISALVNHGGQLDMVHIQNAALAGGVIVGTSAEMVLTPFGALIAGCVAGLVATLGFRFLTPILAARLKIQDTCGIHNLHGMPGLLGALLGALLAALATPDAYGEGMADVFPLVAAGQRTPIRQSLFQLLGLLVSLGMATVGGSLVGAILKMRSLAMPPDALCFEDQIYWEVPEEHRDGFQVMEALSTEEADKATHA
SIO_010081: RHBG
subclass of: SO_0000673
so part of: RHBG
location: join(194732..194898,195812..195962,196965..197112,197473..197639,198182..198319,198482..198615,198772..198893,199483..199556,200212..200292)
location: region:194732-200292:1
so has part: feature:194732-194898:1:exon
so has part: feature:195812-195962:1:exon
so has part: feature:196965-197112:1:exon
so has part: feature:197473-197639:1:exon
so has part: feature:198182-198319:1:exon
so has part: feature:198482-198615:1:exon
so has part: feature:198772-198893:1:exon
so has part: feature:199483-199556:1:exon
so has part: feature:200212-200292:1:exon

XP_032089826.1
type: Protein
SIO_000068: ncbiprotein

position:194732:1
position: 194732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194732-194898:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:195812-195962:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:196965-197112:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:197473-197639:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:198182-198319:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:198482-198615:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:198772-198893:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:199483-199556:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:200212-200292:1:exon

MEF2D
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: MEF2D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(234594..324185)
location: region:234594-324185:-1
so has part: feature:234594-324185:-1:exon
subclass of: SO_0000010

116519779
type: Gene
SIO_000068: ncbigene

position:234594:-1
position: 234594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324185:-1
position: 324185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234594-324185:-1:exon

MEF2D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: MEF2D
product: myocyte enhancer factor 2D, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_032233808.1
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: complement(join(234594..237702,239418..239562,242918..243044,246098..246291,248800..248856,249523..249736,252401..252538,256892..257095,271570..271848,324009..324185))
location: region:234594-324185:-1
so has part: feature:324009-324185:-1:exon
so has part: feature:271570-271848:-1:exon
so has part: feature:256892-257095:-1:exon
so has part: feature:252401-252538:-1:exon
so has part: feature:249523-249736:-1:exon
so has part: feature:248800-248856:-1:exon
so has part: feature:246098-246291:-1:exon
so has part: feature:242918-243044:-1:exon
so has part: feature:239418-239562:-1:exon
so has part: feature:234594-237702:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:324009-324185:-1:exon

position:324009:-1
position: 324009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:271570-271848:-1:exon

position:271570:-1
position: 271570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271848:-1
position: 271848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:256892-257095:-1:exon

position:256892:-1
position: 256892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257095:-1
position: 257095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:252401-252538:-1:exon

position:252401:-1
position: 252401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252538:-1
position: 252538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:249523-249736:-1:exon

position:249523:-1
position: 249523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249736:-1
position: 249736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:248800-248856:-1:exon

position:248800:-1
position: 248800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248856:-1
position: 248856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:246098-246291:-1:exon

position:246098:-1
position: 246098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246291:-1
position: 246291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:242918-243044:-1:exon

position:242918:-1
position: 242918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243044:-1
position: 243044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:239418-239562:-1:exon

position:239418:-1
position: 239418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239562:-1
position: 239562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:234594-237702:-1:exon

position:237702:-1
position: 237702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MEF2D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: MEF2D
product: myocyte enhancer factor 2D, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_032233807.1
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: complement(join(234594..237702,239418..239562,242918..243047,246098..246291,248800..248856,249523..249736,252401..252538,256892..257095,271570..271848,324009..324185))
location: region:234594-324185:-1
so has part: feature:324009-324185:-1:exon
so has part: feature:271570-271848:-1:exon
so has part: feature:256892-257095:-1:exon
so has part: feature:252401-252538:-1:exon
so has part: feature:249523-249736:-1:exon
so has part: feature:248800-248856:-1:exon
so has part: feature:246098-246291:-1:exon
so has part: feature:242918-243047:-1:exon
so has part: feature:239418-239562:-1:exon
so has part: feature:234594-237702:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:324009-324185:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271570-271848:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:256892-257095:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:252401-252538:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:249523-249736:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:248800-248856:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:246098-246291:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:242918-243047:-1:exon

position:243047:-1
position: 243047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:239418-239562:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:234594-237702:-1:exon

MEF2D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: MEF2D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myocyte-specific enhancer factor 2D isoform X2
translation: MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCESPEPDGEDSIDQSPLTEDKYRKASEDLDNFFKRYGSSVPAPNFAMPVTVPVSNQSALPFSSPGGSLVTPSLVTSSLTDPRLLSPQQQPALQRNTVSPALPQRPASAGAMLGGELGNTNGACPSPVGNGYVSARASPNLLPVSNGNSLGKAVPAKSPPPTAQHSNPLATNIRKPDLRVITSQGGKGLLHHLNAQRLMVSQATHSLTTPVVSVATPSLLTQGLPFSAMPTAYNTDYQLSSAELSSLPAFSSPTGLSLGSLSAWQPQQMQQPQQQIPVSLSNLIQGSHLPHTAAATASASAATLTVNTSPSISIKSEPISPSRERNSGTPLSSSSFPHQARHEPSGRSPVDSLSSNASSYEGPPEREDPSRADFGSSLGLLRPSAEAEGENPSIKRMRLDAWAT
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: complement(join(237339..237702,239418..239562,242918..243044,246098..246291,248800..248856,249523..249736,252401..252538,256892..257095,271570..271623))
location: region:237339-271623:-1
so has part: feature:271570-271623:-1:exon
so has part: feature:256892-257095:-1:exon
so has part: feature:252401-252538:-1:exon
so has part: feature:249523-249736:-1:exon
so has part: feature:248800-248856:-1:exon
so has part: feature:246098-246291:-1:exon
so has part: feature:242918-243044:-1:exon
so has part: feature:239418-239562:-1:exon
so has part: feature:237339-237702:-1:exon

XP_032089699.1
type: Protein
SIO_000068: ncbiprotein

position:237339:-1
position: 237339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271623:-1
position: 271623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271570-271623:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:256892-257095:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:252401-252538:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249523-249736:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:248800-248856:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:246098-246291:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:242918-243044:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:239418-239562:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:237339-237702:-1:exon

MEF2D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: MEF2D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myocyte-specific enhancer factor 2D isoform X1
translation: MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCESPEPDGEDSIDQSPLTEDKYRKASEDLDNFFKRYGSSVPAPNFAMPVTVPVSNQSALPFSSPGGSLVTPSLVTSSLTDPRLLSPQQQPALQRNTVSPALPQRPASAGAMLGGELGNTNGACPSPVGNGYVSARASPNLLPVSNGNSLGKAVPAKSPPPTAQHSNPLATNIRKPDLRVITSQGGKGLLHHLQNAQRLMVSQATHSLTTPVVSVATPSLLTQGLPFSAMPTAYNTDYQLSSAELSSLPAFSSPTGLSLGSLSAWQPQQMQQPQQQIPVSLSNLIQGSHLPHTAAATASASAATLTVNTSPSISIKSEPISPSRERNSGTPLSSSSFPHQARHEPSGRSPVDSLSSNASSYEGPPEREDPSRADFGSSLGLLRPSAEAEGENPSIKRMRLDAWAT
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: complement(join(237339..237702,239418..239562,242918..243047,246098..246291,248800..248856,249523..249736,252401..252538,256892..257095,271570..271623))
location: region:237339-271623:-1
so has part: feature:271570-271623:-1:exon
so has part: feature:256892-257095:-1:exon
so has part: feature:252401-252538:-1:exon
so has part: feature:249523-249736:-1:exon
so has part: feature:248800-248856:-1:exon
so has part: feature:246098-246291:-1:exon
so has part: feature:242918-243047:-1:exon
so has part: feature:239418-239562:-1:exon
so has part: feature:237339-237702:-1:exon

XP_032089698.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:271570-271623:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:256892-257095:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:252401-252538:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249523-249736:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:248800-248856:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:246098-246291:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:242918-243047:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:239418-239562:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:237339-237702:-1:exon

IQGAP3
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: IQGAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(332504..361073)
location: region:332504-361073:-1
so has part: feature:332504-361073:-1:exon
subclass of: SO_0000010

116519854
type: Gene
SIO_000068: ncbigene

position:332504:-1
position: 332504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:361073:-1
position: 361073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332504-361073:-1:exon

IQGAP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: IQGAP3
product: IQ motif containing GTPase activating protein 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_032233923.1
SIO_010081: IQGAP3
subclass of: SO_0000673
so part of: IQGAP3
location: complement(join(332504..333448,333702..333810,334067..334159,334692..334858,335310..335492,335940..336027,337293..337443,338733..338835,339454..339586,340621..340853,341604..341688,342382..342522,342761..342985,345367..345530,346075..346227,347027..347235,347498..347567,348215..348286,348385..348468,349035..349205,349510..349649,349766..349933,350093..350183,351380..351543,351957..352081,352635..352795,352893..353056,353215..353302,353903..354066,354986..355073,355340..355408,355504..355682,355767..355880,356550..356617,357830..357906,357996..358073,358858..359014,359978..360065,360498..361073))
location: region:332504-361073:-1
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so has part: feature:359978-360065:-1:exon
so has part: feature:358858-359014:-1:exon
so has part: feature:357996-358073:-1:exon
so has part: feature:357830-357906:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:360498-361073:-1:exon

position:360498:-1
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reference: sequence
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urn:…
SIO_000300: 2
SIO_000628: feature:359978-360065:-1:exon

position:359978:-1
position: 359978
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position:360065:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 3
SIO_000628: feature:358858-359014:-1:exon

position:358858:-1
position: 358858
reference: sequence
type: ReverseStrandPosition
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position:359014:-1
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reference: sequence
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urn:…
SIO_000300: 4
SIO_000628: feature:357996-358073:-1:exon

position:357996:-1
position: 357996
reference: sequence
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position:358073:-1
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urn:…
SIO_000300: 5
SIO_000628: feature:357830-357906:-1:exon

position:357830:-1
position: 357830
reference: sequence
type: ReverseStrandPosition
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position:357906:-1
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urn:…
SIO_000300: 6
SIO_000628: feature:356550-356617:-1:exon

position:356550:-1
position: 356550
reference: sequence
type: ReverseStrandPosition
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position:356617:-1
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reference: sequence
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urn:…
SIO_000300: 7
SIO_000628: feature:355767-355880:-1:exon

position:355767:-1
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reference: sequence
type: ReverseStrandPosition
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position:355880:-1
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urn:…
SIO_000300: 8
SIO_000628: feature:355504-355682:-1:exon

position:355504:-1
position: 355504
reference: sequence
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position:355682:-1
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urn:…
SIO_000300: 9
SIO_000628: feature:355340-355408:-1:exon

position:355340:-1
position: 355340
reference: sequence
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position:355408:-1
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urn:…
SIO_000300: 10
SIO_000628: feature:354986-355073:-1:exon

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reference: sequence
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urn:…
SIO_000300: 11
SIO_000628: feature:353903-354066:-1:exon

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urn:…
SIO_000300: 12
SIO_000628: feature:353215-353302:-1:exon

position:353215:-1
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position:353302:-1
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urn:…
SIO_000300: 13
SIO_000628: feature:352893-353056:-1:exon

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position: 352893
reference: sequence
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position:353056:-1
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urn:…
SIO_000300: 14
SIO_000628: feature:352635-352795:-1:exon

position:352635:-1
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reference: sequence
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position:352795:-1
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urn:…
SIO_000300: 15
SIO_000628: feature:351957-352081:-1:exon

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reference: sequence
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position:352081:-1
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reference: sequence
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urn:…
SIO_000300: 16
SIO_000628: feature:351380-351543:-1:exon

position:351380:-1
position: 351380
reference: sequence
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position:351543:-1
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urn:…
SIO_000300: 17
SIO_000628: feature:350093-350183:-1:exon

position:350093:-1
position: 350093
reference: sequence
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position:350183:-1
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urn:…
SIO_000300: 18
SIO_000628: feature:349766-349933:-1:exon

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position:349933:-1
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urn:…
SIO_000300: 19
SIO_000628: feature:349510-349649:-1:exon

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position:349649:-1
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urn:…
SIO_000300: 20
SIO_000628: feature:349035-349205:-1:exon

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position:349205:-1
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urn:…
SIO_000300: 21
SIO_000628: feature:348385-348468:-1:exon

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position:348468:-1
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urn:…
SIO_000300: 22
SIO_000628: feature:348215-348286:-1:exon

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urn:…
SIO_000300: 23
SIO_000628: feature:347498-347567:-1:exon

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urn:…
SIO_000300: 24
SIO_000628: feature:347027-347235:-1:exon

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urn:…
SIO_000300: 25
SIO_000628: feature:346075-346227:-1:exon

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urn:…
SIO_000300: 26
SIO_000628: feature:345367-345530:-1:exon

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urn:…
SIO_000300: 27
SIO_000628: feature:342761-342985:-1:exon

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urn:…
SIO_000300: 28
SIO_000628: feature:342382-342522:-1:exon

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urn:…
SIO_000300: 29
SIO_000628: feature:341604-341688:-1:exon

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urn:…
SIO_000300: 30
SIO_000628: feature:340621-340853:-1:exon

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urn:…
SIO_000300: 31
SIO_000628: feature:339454-339586:-1:exon

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urn:…
SIO_000300: 32
SIO_000628: feature:338733-338835:-1:exon

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urn:…
SIO_000300: 33
SIO_000628: feature:337293-337443:-1:exon

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urn:…
SIO_000300: 34
SIO_000628: feature:335940-336027:-1:exon

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urn:…
SIO_000300: 35
SIO_000628: feature:335310-335492:-1:exon

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reference: sequence
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urn:…
SIO_000300: 36
SIO_000628: feature:334692-334858:-1:exon

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reference: sequence
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urn:…
SIO_000300: 37
SIO_000628: feature:334067-334159:-1:exon

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urn:…
SIO_000300: 38
SIO_000628: feature:333702-333810:-1:exon

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urn:…
SIO_000300: 39
SIO_000628: feature:332504-333448:-1:exon

position:333448:-1
position: 333448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IQGAP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: IQGAP3
product: IQ motif containing GTPase activating protein 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_032233922.1
SIO_010081: IQGAP3
subclass of: SO_0000673
so part of: IQGAP3
location: complement(join(332504..333448,333702..333810,334067..334159,334692..334858,335310..335492,335940..336027,337293..337443,338733..338835,339454..339586,340621..340853,341604..341688,342382..342522,342761..342985,345367..345530,346075..346227,347027..347235,347498..347567,348215..348286,348385..348468,349035..349205,349510..349649,349766..349933,350093..350183,351380..351543,351957..352081,352635..352795,352893..353056,353215..353302,353903..354066,354986..355073,355504..355682,355767..355880,356550..356617,357830..357906,357996..358073,358858..359014,359978..360276))
location: region:332504-360276:-1
so has part: feature:359978-360276:-1:exon
so has part: feature:358858-359014:-1:exon
so has part: feature:357996-358073:-1:exon
so has part: feature:357830-357906:-1:exon
so has part: feature:356550-356617:-1:exon
so has part: feature:355767-355880:-1:exon
so has part: feature:355504-355682:-1:exon
so has part: feature:354986-355073:-1:exon
so has part: feature:353903-354066:-1:exon
so has part: feature:353215-353302:-1:exon
so has part: feature:352893-353056:-1:exon
so has part: feature:352635-352795:-1:exon
so has part: feature:351957-352081:-1:exon
so has part: feature:351380-351543:-1:exon
so has part: feature:350093-350183:-1:exon
so has part: feature:349766-349933:-1:exon
so has part: feature:349510-349649:-1:exon
so has part: feature:349035-349205:-1:exon
so has part: feature:348385-348468:-1:exon
so has part: feature:348215-348286:-1:exon
so has part: feature:347498-347567:-1:exon
so has part: feature:347027-347235:-1:exon
so has part: feature:346075-346227:-1:exon
so has part: feature:345367-345530:-1:exon
so has part: feature:342761-342985:-1:exon
so has part: feature:342382-342522:-1:exon
so has part: feature:341604-341688:-1:exon
so has part: feature:340621-340853:-1:exon
so has part: feature:339454-339586:-1:exon
so has part: feature:338733-338835:-1:exon
so has part: feature:337293-337443:-1:exon
so has part: feature:335940-336027:-1:exon
so has part: feature:335310-335492:-1:exon
so has part: feature:334692-334858:-1:exon
so has part: feature:334067-334159:-1:exon
so has part: feature:333702-333810:-1:exon
so has part: feature:332504-333448:-1:exon

position:360276:-1
position: 360276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359978-360276:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:358858-359014:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:357996-358073:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:357830-357906:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:356550-356617:-1:exon

urn:…
SIO_000300: 6
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SIO_000300: 7
SIO_000628: feature:355504-355682:-1:exon

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SIO_000300: 8
SIO_000628: feature:354986-355073:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:353903-354066:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:353215-353302:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:352893-353056:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:352635-352795:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:351957-352081:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:351380-351543:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:350093-350183:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:349766-349933:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:349510-349649:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:349035-349205:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:348385-348468:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:348215-348286:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:347498-347567:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:347027-347235:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:346075-346227:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:345367-345530:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:342761-342985:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:342382-342522:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:341604-341688:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:340621-340853:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:339454-339586:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:338733-338835:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:337293-337443:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:335940-336027:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:335310-335492:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:334692-334858:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:334067-334159:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:333702-333810:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:332504-333448:-1:exon

IQGAP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: IQGAP3
product: IQ motif containing GTPase activating protein 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032233921.1
SIO_010081: IQGAP3
subclass of: SO_0000673
so part of: IQGAP3
location: complement(join(332504..333448,333702..333810,334067..334159,334692..334858,335310..335492,335940..336027,337293..337443,338733..338835,339454..339586,340621..340853,341604..341688,342382..342522,342761..342985,345367..345530,346075..346227,347027..347235,347498..347567,348215..348286,348385..348468,349035..349205,349510..349649,349766..349933,350093..350183,351380..351543,351957..352081,352635..352795,352893..353056,353215..353302,353903..354066,354986..355073,355358..355408,355504..355682,355767..355880,356550..356617,357830..357906,357996..358073,358858..359014,359978..360276))
location: region:332504-360276:-1
so has part: feature:359978-360276:-1:exon
so has part: feature:358858-359014:-1:exon
so has part: feature:357996-358073:-1:exon
so has part: feature:357830-357906:-1:exon
so has part: feature:356550-356617:-1:exon
so has part: feature:355767-355880:-1:exon
so has part: feature:355504-355682:-1:exon
so has part: feature:355358-355408:-1:exon
so has part: feature:354986-355073:-1:exon
so has part: feature:353903-354066:-1:exon
so has part: feature:353215-353302:-1:exon
so has part: feature:352893-353056:-1:exon
so has part: feature:352635-352795:-1:exon
so has part: feature:351957-352081:-1:exon
so has part: feature:351380-351543:-1:exon
so has part: feature:350093-350183:-1:exon
so has part: feature:349766-349933:-1:exon
so has part: feature:349510-349649:-1:exon
so has part: feature:349035-349205:-1:exon
so has part: feature:348385-348468:-1:exon
so has part: feature:348215-348286:-1:exon
so has part: feature:347498-347567:-1:exon
so has part: feature:347027-347235:-1:exon
so has part: feature:346075-346227:-1:exon
so has part: feature:345367-345530:-1:exon
so has part: feature:342761-342985:-1:exon
so has part: feature:342382-342522:-1:exon
so has part: feature:341604-341688:-1:exon
so has part: feature:340621-340853:-1:exon
so has part: feature:339454-339586:-1:exon
so has part: feature:338733-338835:-1:exon
so has part: feature:337293-337443:-1:exon
so has part: feature:335940-336027:-1:exon
so has part: feature:335310-335492:-1:exon
so has part: feature:334692-334858:-1:exon
so has part: feature:334067-334159:-1:exon
so has part: feature:333702-333810:-1:exon
so has part: feature:332504-333448:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:359978-360276:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:358858-359014:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:357996-358073:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:357830-357906:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:356550-356617:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:355767-355880:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:355504-355682:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:355358-355408:-1:exon

position:355358:-1
position: 355358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:354986-355073:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:353903-354066:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:353215-353302:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:352893-353056:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:352635-352795:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:351957-352081:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:351380-351543:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:350093-350183:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:349766-349933:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:349510-349649:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:349035-349205:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:348385-348468:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:348215-348286:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:347498-347567:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:347027-347235:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:346075-346227:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:345367-345530:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:342761-342985:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:342382-342522:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:341604-341688:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:340621-340853:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:339454-339586:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:338733-338835:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:337293-337443:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:335940-336027:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:335310-335492:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:334692-334858:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:334067-334159:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:333702-333810:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:332504-333448:-1:exon

IQGAP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: IQGAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras GTPase-activating-like protein IQGAP3 isoform X3
translation: MAQRGQVSSGYERLTADEMDERRRQNEAYQYLCHLEEAKRWMEACLKEPLPPPTELEESLRNGVTLAKLGHFFAPDVCPLEKIYDLGQARFQACGLHFRHTDNINRWRDAMSHVELPAIFHPETTDIYEKKNMPRVVYCIHALSFYLSKQGLAPQMQDLYGKVDFTDEEINHMKGELEKYGLQLPSFSKIGGLLAKELSVDEAAVHAAILAINNAVEVGIVAETVAALCNPSAMLVGVQESCGGPYQEELCRAKGEKAENAKNRKGSQTFAGDPRQPPSAQVWKTAQHLQKIPDGEDIYDHCLTQAEIQGSINLVNIRSALEMVDDALEAQDPRTLYHLLQDPILALKSLRRDNASWYLDQLSADREEKALELGYVDLLEQGEIQAGLYMANQRGDQERAAAHAVSHINASLRRGMAEETVRALANPEAQLPEVFPFAAELYQRDLLALQRQHPQGTLAQEELSVAVEMLSAVALVNQALEDGDSRSFRRSLLSSALGLANVEESHAQRYFEGLSEQKRLLRETQRGFLSWNDIQASVNDVNASAQEERDKIHAVRLINEALLGECPEKTLRALLLPAAGLSDVTLPRAKRYHFVLARMLRQKAQAAGGPGASLWWEEIQEGVCRANRDSKAAQQMALGLAAINQAIKEGNAAQTVRVLRSPDVGLSGVVAECAAAYQAQFSAILAARRPAGGHSEALWVRHRLRDGSEYYFHLRSFEGSWEQPLTLSTAHLSREEIQEAITRVSSAHDRQRLWQSQTRLVVRLQARMRGFLFRRHWAARQHFLSRQVPAAAKIQAAWRGHRQRRSHLERMCYLRRNTAAAIKIQSWVRMWLARKRYLGRLRDFREKVAAVIKIQAFVRGNKAREEYRMLVHSRDPPLRVIRRFAHLLEQSQQDHQEEAELLGLREKLARGIRSNQQLESDLNLMDINIGLLVKNRITLQEVVSHCKKLTRKNKEELSSRMDGGKENGLKGLSQEKRKALEAYQHLFYHLQTQPVCLARLLMQMPPNKSTRFMESVVFSLYNYASSPREAYLLLRLFQRALQEEIASRVTRPREILTGNPAVIRMVVSFYRNARGQNALRQILAEPVREVLQKPSLSIRTSPVEIYRGWINETESQSGQKSHLPYNVTPQQALAHPEVQRRLDASLGHLLVLADNFLSAILSSVEKIPYGMRYMAKVLKATLTEKFPDASKEEIYKVVGNLLYYRFMNPAVVAPDGFDVLDFSAGAPLHPDQRRNLASVAKILQHAAANQLFEGENSHLNVVNEYLEETHQKFRAFIDAACSVPEPEERFKVDKYSELVAITKPVVYITVGELVNTHKLLLEHQPSLAPDPQDPLHGLLQDLGEVPTVASLLGHSLAQGATGAWEEAVSQLSRTELSLTLSGKYGGVEAEAEGEAAAGGLWLSTKQMLLDVIQSQPGDSLDEILHSKASEAEEQLHRQLLQRRATGHPQGPGGPPHSHLSLAEKKKKVLRNLERLALVGSAGQPRALLSEIAQDIRSQRHHRQSRRGQLAKLQQTLRGLASKRRFYQEQVDYYQKYLRTCLDNLASADRPSKKQAVLHYTAARLFEKGVLLEIEALPPNQLRNVIFDILPSREAGRFQVKAKFMGVDMENFQLSYQDLLQLQYEGVTIMKMFGRAKINVNLLIFLLNKKFFKK
SIO_010081: IQGAP3
subclass of: SO_0000673
so part of: IQGAP3
location: complement(join(333335..333448,333702..333810,334067..334159,334692..334858,335310..335492,335940..336027,337293..337443,338733..338835,339454..339586,340621..340853,341604..341688,342382..342522,342761..342985,345367..345530,346075..346227,347027..347235,347498..347567,348215..348286,348385..348468,349035..349205,349510..349649,349766..349933,350093..350183,351380..351543,351957..352081,352635..352795,352893..353056,353215..353302,353903..354066,354986..355073,355340..355408,355504..355682,355767..355880,356550..356617,357830..357906,357996..358073,358858..359014,359978..360065,360498..360528))
location: region:333335-360528:-1
so has part: feature:360498-360528:-1:exon
so has part: feature:359978-360065:-1:exon
so has part: feature:358858-359014:-1:exon
so has part: feature:357996-358073:-1:exon
so has part: feature:357830-357906:-1:exon
so has part: feature:356550-356617:-1:exon
so has part: feature:355767-355880:-1:exon
so has part: feature:355504-355682:-1:exon
so has part: feature:355340-355408:-1:exon
so has part: feature:354986-355073:-1:exon
so has part: feature:353903-354066:-1:exon
so has part: feature:353215-353302:-1:exon
so has part: feature:352893-353056:-1:exon
so has part: feature:352635-352795:-1:exon
so has part: feature:351957-352081:-1:exon
so has part: feature:351380-351543:-1:exon
so has part: feature:350093-350183:-1:exon
so has part: feature:349766-349933:-1:exon
so has part: feature:349510-349649:-1:exon
so has part: feature:349035-349205:-1:exon
so has part: feature:348385-348468:-1:exon
so has part: feature:348215-348286:-1:exon
so has part: feature:347498-347567:-1:exon
so has part: feature:347027-347235:-1:exon
so has part: feature:346075-346227:-1:exon
so has part: feature:345367-345530:-1:exon
so has part: feature:342761-342985:-1:exon
so has part: feature:342382-342522:-1:exon
so has part: feature:341604-341688:-1:exon
so has part: feature:340621-340853:-1:exon
so has part: feature:339454-339586:-1:exon
so has part: feature:338733-338835:-1:exon
so has part: feature:337293-337443:-1:exon
so has part: feature:335940-336027:-1:exon
so has part: feature:335310-335492:-1:exon
so has part: feature:334692-334858:-1:exon
so has part: feature:334067-334159:-1:exon
so has part: feature:333702-333810:-1:exon
so has part: feature:333335-333448:-1:exon

XP_032089814.1
type: Protein
SIO_000068: ncbiprotein

position:333335:-1
position: 333335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360528:-1
position: 360528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360498-360528:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:359978-360065:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:358858-359014:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:357996-358073:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:357830-357906:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:356550-356617:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:355767-355880:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:355504-355682:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:355340-355408:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:354986-355073:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:353903-354066:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:353215-353302:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:352893-353056:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:352635-352795:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:351957-352081:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:351380-351543:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:350093-350183:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:349766-349933:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:349510-349649:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:349035-349205:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:348385-348468:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:348215-348286:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:347498-347567:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:347027-347235:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:346075-346227:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:345367-345530:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:342761-342985:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:342382-342522:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:341604-341688:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:340621-340853:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:339454-339586:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:338733-338835:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:337293-337443:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:335940-336027:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:335310-335492:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:334692-334858:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:334067-334159:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:333702-333810:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:333335-333448:-1:exon

IQGAP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: IQGAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras GTPase-activating-like protein IQGAP3 isoform X2
translation: MDERRRQNEAYQYLCHLEEAKRWMEACLKEPLPPPTELEESLRNGVTLAKLGHFFAPDVCPLEKIYDLGQARFQACGLHFRHTDNINRWRDAMSHVELPAIFHPETTDIYEKKNMPRVVYCIHALSFYLSKQGLAPQMQDLYGKVDFTDEEINHMKGELEKYGLQLPSFSKIGGLLAKELSVDEAAVHAAILAINNAVEVGIVAETVAALCNPSAMLVGVQESCGGPYQEELCRAKGEKAENAKNRHLQKIPDGEDIYDHCLTQAEIQGSINLVNIRSALEMVDDALEAQDPRTLYHLLQDPILALKSLRRDNASWYLDQLSADREEKALELGYVDLLEQGEIQAGLYMANQRGDQERAAAHAVSHINASLRRGMAEETVRALANPEAQLPEVFPFAAELYQRDLLALQRQHPQGTLAQEELSVAVEMLSAVALVNQALEDGDSRSFRRSLLSSALGLANVEESHAQRYFEGLSEQKRLLRETQRGFLSWNDIQASVNDVNASAQEERDKIHAVRLINEALLGECPEKTLRALLLPAAGLSDVTLPRAKRYHFVLARMLRQKAQAAGGPGASLWWEEIQEGVCRANRDSKAAQQMALGLAAINQAIKEGNAAQTVRVLRSPDVGLSGVVAECAAAYQAQFSAILAARRPAGGHSEALWVRHRLRDGSEYYFHLRSFEGSWEQPLTLSTAHLSREEIQEAITRVSSAHDRQRLWQSQTRLVVRLQARMRGFLFRRHWAARQHFLSRQVPAAAKIQAAWRGHRQRRSHLERMCYLRRNTAAAIKIQSWVRMWLARKRYLGRLRDFREKVAAVIKIQAFVRGNKAREEYRMLVHSRDPPLRVIRRFAHLLEQSQQDHQEEAELLGLREKLARGIRSNQQLESDLNLMDINIGLLVKNRITLQEVVSHCKKLTRKNKEELSSRMDGGKENGLKGLSQEKRKALEAYQHLFYHLQTQPVCLARLLMQMPPNKSTRFMESVVFSLYNYASSPREAYLLLRLFQRALQEEIASRVTRPREILTGNPAVIRMVVSFYRNARGQNALRQILAEPVREVLQKPSLSIRTSPVEIYRGWINETESQSGQKSHLPYNVTPQQALAHPEVQRRLDASLGHLLVLADNFLSAILSSVEKIPYGMRYMAKVLKATLTEKFPDASKEEIYKVVGNLLYYRFMNPAVVAPDGFDVLDFSAGAPLHPDQRRNLASVAKILQHAAANQLFEGENSHLNVVNEYLEETHQKFRAFIDAACSVPEPEERFKVDKYSELVAITKPVVYITVGELVNTHKLLLEHQPSLAPDPQDPLHGLLQDLGEVPTVASLLGHSLAQGATGAWEEAVSQLSRTELSLTLSGKYGGVEAEAEGEAAAGGLWLSTKQMLLDVIQSQPGDSLDEILHSKASEAEEQLHRQLLQRRATGHPQGPGGPPHSHLSLAEKKKKVLRNLERLALVGSAGQPRALLSEIAQDIRSQRHHRQSRRGQLAKLQQTLRGLASKRRFYQEQVDYYQKYLRTCLDNLASADRPSKKQAVLHYTAARLFEKGVLLEIEALPPNQLRNVIFDILPSREAGRFQVKAKFMGVDMENFQLSYQDLLQLQYEGVTIMKMFGRAKINVNLLIFLLNKKFFKK
SIO_010081: IQGAP3
subclass of: SO_0000673
so part of: IQGAP3
location: complement(join(333335..333448,333702..333810,334067..334159,334692..334858,335310..335492,335940..336027,337293..337443,338733..338835,339454..339586,340621..340853,341604..341688,342382..342522,342761..342985,345367..345530,346075..346227,347027..347235,347498..347567,348215..348286,348385..348468,349035..349205,349510..349649,349766..349933,350093..350183,351380..351543,351957..352081,352635..352795,352893..353056,353215..353302,353903..354066,354986..355073,355504..355682,355767..355880,356550..356617,357830..357906,357996..358073,358858..359014,359978..360042))
location: region:333335-360042:-1
so has part: feature:359978-360042:-1:exon
so has part: feature:358858-359014:-1:exon
so has part: feature:357996-358073:-1:exon
so has part: feature:357830-357906:-1:exon
so has part: feature:356550-356617:-1:exon
so has part: feature:355767-355880:-1:exon
so has part: feature:355504-355682:-1:exon
so has part: feature:354986-355073:-1:exon
so has part: feature:353903-354066:-1:exon
so has part: feature:353215-353302:-1:exon
so has part: feature:352893-353056:-1:exon
so has part: feature:352635-352795:-1:exon
so has part: feature:351957-352081:-1:exon
so has part: feature:351380-351543:-1:exon
so has part: feature:350093-350183:-1:exon
so has part: feature:349766-349933:-1:exon
so has part: feature:349510-349649:-1:exon
so has part: feature:349035-349205:-1:exon
so has part: feature:348385-348468:-1:exon
so has part: feature:348215-348286:-1:exon
so has part: feature:347498-347567:-1:exon
so has part: feature:347027-347235:-1:exon
so has part: feature:346075-346227:-1:exon
so has part: feature:345367-345530:-1:exon
so has part: feature:342761-342985:-1:exon
so has part: feature:342382-342522:-1:exon
so has part: feature:341604-341688:-1:exon
so has part: feature:340621-340853:-1:exon
so has part: feature:339454-339586:-1:exon
so has part: feature:338733-338835:-1:exon
so has part: feature:337293-337443:-1:exon
so has part: feature:335940-336027:-1:exon
so has part: feature:335310-335492:-1:exon
so has part: feature:334692-334858:-1:exon
so has part: feature:334067-334159:-1:exon
so has part: feature:333702-333810:-1:exon
so has part: feature:333335-333448:-1:exon

XP_032089813.1
type: Protein
SIO_000068: ncbiprotein

position:360042:-1
position: 360042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359978-360042:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:358858-359014:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:357996-358073:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:357830-357906:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:356550-356617:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:355767-355880:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:355504-355682:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:354986-355073:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:353903-354066:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:353215-353302:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:352893-353056:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:352635-352795:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:351957-352081:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:351380-351543:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:350093-350183:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:349766-349933:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:349510-349649:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:349035-349205:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:348385-348468:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:348215-348286:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:347498-347567:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:347027-347235:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:346075-346227:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:345367-345530:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:342761-342985:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:342382-342522:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:341604-341688:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:340621-340853:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:339454-339586:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:338733-338835:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:337293-337443:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:335940-336027:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:335310-335492:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:334692-334858:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:334067-334159:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:333702-333810:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:333335-333448:-1:exon

IQGAP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: IQGAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras GTPase-activating-like protein IQGAP3 isoform X1
translation: MDERRRQNEAYQYLCHLEEAKRWMEACLKEPLPPPTELEESLRNGVTLAKLGHFFAPDVCPLEKIYDLGQARFQACGLHFRHTDNINRWRDAMSHVELPAIFHPETTDIYEKKNMPRVVYCIHALSFYLSKQGLAPQMQDLYGKVDFTDEEINHMKGELEKYGLQLPSFSKIGGLLAKELSVDEAAVHAAILAINNAVEVGIVAETVAALCNPSAMLVGVQESCGGPYQEELCRAKGEKAENAKNRKGSQTFAGDPRQPPSAQHLQKIPDGEDIYDHCLTQAEIQGSINLVNIRSALEMVDDALEAQDPRTLYHLLQDPILALKSLRRDNASWYLDQLSADREEKALELGYVDLLEQGEIQAGLYMANQRGDQERAAAHAVSHINASLRRGMAEETVRALANPEAQLPEVFPFAAELYQRDLLALQRQHPQGTLAQEELSVAVEMLSAVALVNQALEDGDSRSFRRSLLSSALGLANVEESHAQRYFEGLSEQKRLLRETQRGFLSWNDIQASVNDVNASAQEERDKIHAVRLINEALLGECPEKTLRALLLPAAGLSDVTLPRAKRYHFVLARMLRQKAQAAGGPGASLWWEEIQEGVCRANRDSKAAQQMALGLAAINQAIKEGNAAQTVRVLRSPDVGLSGVVAECAAAYQAQFSAILAARRPAGGHSEALWVRHRLRDGSEYYFHLRSFEGSWEQPLTLSTAHLSREEIQEAITRVSSAHDRQRLWQSQTRLVVRLQARMRGFLFRRHWAARQHFLSRQVPAAAKIQAAWRGHRQRRSHLERMCYLRRNTAAAIKIQSWVRMWLARKRYLGRLRDFREKVAAVIKIQAFVRGNKAREEYRMLVHSRDPPLRVIRRFAHLLEQSQQDHQEEAELLGLREKLARGIRSNQQLESDLNLMDINIGLLVKNRITLQEVVSHCKKLTRKNKEELSSRMDGGKENGLKGLSQEKRKALEAYQHLFYHLQTQPVCLARLLMQMPPNKSTRFMESVVFSLYNYASSPREAYLLLRLFQRALQEEIASRVTRPREILTGNPAVIRMVVSFYRNARGQNALRQILAEPVREVLQKPSLSIRTSPVEIYRGWINETESQSGQKSHLPYNVTPQQALAHPEVQRRLDASLGHLLVLADNFLSAILSSVEKIPYGMRYMAKVLKATLTEKFPDASKEEIYKVVGNLLYYRFMNPAVVAPDGFDVLDFSAGAPLHPDQRRNLASVAKILQHAAANQLFEGENSHLNVVNEYLEETHQKFRAFIDAACSVPEPEERFKVDKYSELVAITKPVVYITVGELVNTHKLLLEHQPSLAPDPQDPLHGLLQDLGEVPTVASLLGHSLAQGATGAWEEAVSQLSRTELSLTLSGKYGGVEAEAEGEAAAGGLWLSTKQMLLDVIQSQPGDSLDEILHSKASEAEEQLHRQLLQRRATGHPQGPGGPPHSHLSLAEKKKKVLRNLERLALVGSAGQPRALLSEIAQDIRSQRHHRQSRRGQLAKLQQTLRGLASKRRFYQEQVDYYQKYLRTCLDNLASADRPSKKQAVLHYTAARLFEKGVLLEIEALPPNQLRNVIFDILPSREAGRFQVKAKFMGVDMENFQLSYQDLLQLQYEGVTIMKMFGRAKINVNLLIFLLNKKFFKK
SIO_010081: IQGAP3
subclass of: SO_0000673
so part of: IQGAP3
location: complement(join(333335..333448,333702..333810,334067..334159,334692..334858,335310..335492,335940..336027,337293..337443,338733..338835,339454..339586,340621..340853,341604..341688,342382..342522,342761..342985,345367..345530,346075..346227,347027..347235,347498..347567,348215..348286,348385..348468,349035..349205,349510..349649,349766..349933,350093..350183,351380..351543,351957..352081,352635..352795,352893..353056,353215..353302,353903..354066,354986..355073,355358..355408,355504..355682,355767..355880,356550..356617,357830..357906,357996..358073,358858..359014,359978..360042))
location: region:333335-360042:-1
so has part: feature:359978-360042:-1:exon
so has part: feature:358858-359014:-1:exon
so has part: feature:357996-358073:-1:exon
so has part: feature:357830-357906:-1:exon
so has part: feature:356550-356617:-1:exon
so has part: feature:355767-355880:-1:exon
so has part: feature:355504-355682:-1:exon
so has part: feature:355358-355408:-1:exon
so has part: feature:354986-355073:-1:exon
so has part: feature:353903-354066:-1:exon
so has part: feature:353215-353302:-1:exon
so has part: feature:352893-353056:-1:exon
so has part: feature:352635-352795:-1:exon
so has part: feature:351957-352081:-1:exon
so has part: feature:351380-351543:-1:exon
so has part: feature:350093-350183:-1:exon
so has part: feature:349766-349933:-1:exon
so has part: feature:349510-349649:-1:exon
so has part: feature:349035-349205:-1:exon
so has part: feature:348385-348468:-1:exon
so has part: feature:348215-348286:-1:exon
so has part: feature:347498-347567:-1:exon
so has part: feature:347027-347235:-1:exon
so has part: feature:346075-346227:-1:exon
so has part: feature:345367-345530:-1:exon
so has part: feature:342761-342985:-1:exon
so has part: feature:342382-342522:-1:exon
so has part: feature:341604-341688:-1:exon
so has part: feature:340621-340853:-1:exon
so has part: feature:339454-339586:-1:exon
so has part: feature:338733-338835:-1:exon
so has part: feature:337293-337443:-1:exon
so has part: feature:335940-336027:-1:exon
so has part: feature:335310-335492:-1:exon
so has part: feature:334692-334858:-1:exon
so has part: feature:334067-334159:-1:exon
so has part: feature:333702-333810:-1:exon
so has part: feature:333335-333448:-1:exon

XP_032089812.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:359978-360042:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:358858-359014:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:357996-358073:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:357830-357906:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:356550-356617:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:355767-355880:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:355504-355682:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:355358-355408:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:354986-355073:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:353903-354066:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:353215-353302:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:352893-353056:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:352635-352795:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:351957-352081:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:351380-351543:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:350093-350183:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:349766-349933:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:349510-349649:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:349035-349205:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:348385-348468:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:348215-348286:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:347498-347567:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:347027-347235:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:346075-346227:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:345367-345530:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:342761-342985:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:342382-342522:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:341604-341688:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:340621-340853:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:339454-339586:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:338733-338835:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:337293-337443:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:335940-336027:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:335310-335492:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:334692-334858:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:334067-334159:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:333702-333810:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:333335-333448:-1:exon

NAXE
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: NAXE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 361157..365409
location: region:361157-365409:1
so has part: feature:361157-365409:1:exon
subclass of: SO_0000010

116519855
type: Gene
SIO_000068: ncbigene

position:361157:1
position: 361157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365409:1
position: 365409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361157-365409:1:exon

NAXE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: NAXE
product: NAD(P)HX epimerase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_032233924.1
SIO_010081: NAXE
subclass of: SO_0000673
so part of: NAXE
location: join(361157..361329,362206..362314,362960..363070,363331..363444,363841..363988,365015..365409)
location: region:361157-365409:1
so has part: feature:361157-361329:1:exon
so has part: feature:362206-362314:1:exon
so has part: feature:362960-363070:1:exon
so has part: feature:363331-363444:1:exon
so has part: feature:363841-363988:1:exon
so has part: feature:365015-365409:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:361157-361329:1:exon

position:361329:1
position: 361329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:362206-362314:1:exon

position:362206:1
position: 362206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362314:1
position: 362314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:362960-363070:1:exon

position:362960:1
position: 362960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363070:1
position: 363070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:363331-363444:1:exon

position:363331:1
position: 363331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363444:1
position: 363444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:363841-363988:1:exon

position:363841:1
position: 363841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363988:1
position: 363988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:365015-365409:1:exon

position:365015:1
position: 365015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NAXE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: NAXE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NAD(P)H-hydrate epimerase
translation: MSGPRRVALLGLGLLLSRAAAGHCPARLWPPPRAMQSAAPVLKFLGQKEAQAIDQELFEEYKFSVDQLMELAGLSCATAIAKAYPASSFTISRPAVLIVCGPGNNGGDGLVCARHLKMFGYQPTLHYPKRPNKPLFEGLTTQCKKMEIPFLTEFPSEAALIDEVYGLVVDAVFGFSFQGAVREPFGTILSTLEKVTIPVVSIDIPSGWDVEKGNPDGLQPDMLISLTAPKKAAQHFQGRYHFLGGRFVPEALQKKYALNLPPYPEADSVLRLS
SIO_010081: NAXE
subclass of: SO_0000673
so part of: NAXE
location: join(361193..361329,362206..362314,362960..363070,363331..363444,363841..363988,365015..365217)
location: region:361193-365217:1
so has part: feature:361193-361329:1:exon
so has part: feature:362206-362314:1:exon
so has part: feature:362960-363070:1:exon
so has part: feature:363331-363444:1:exon
so has part: feature:363841-363988:1:exon
so has part: feature:365015-365217:1:exon

XP_032089815.1
type: Protein
SIO_000068: ncbiprotein

position:361193:1
position: 361193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365217:1
position: 365217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361193-361329:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:362206-362314:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:362960-363070:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:363331-363444:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:363841-363988:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:365015-365217:1:exon

UBQLN4
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: UBQLN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(366473..375650)
location: region:366473-375650:-1
so has part: feature:366473-375650:-1:exon
subclass of: SO_0000010

116519940
type: Gene
SIO_000068: ncbigene

position:366473:-1
position: 366473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375650:-1
position: 375650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366473-375650:-1:exon

UBQLN4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: UBQLN4
product: ubiquilin 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_032234052.1
SIO_010081: UBQLN4
subclass of: SO_0000673
so part of: UBQLN4
location: complement(join(366473..367215,368045..368204,368339..368454,368600..368683,369686..369825,370675..370891,371737..371895,373252..373514,374220..374464,375172..375323,375445..375650))
location: region:366473-375650:-1
so has part: feature:375445-375650:-1:exon
so has part: feature:375172-375323:-1:exon
so has part: feature:374220-374464:-1:exon
so has part: feature:373252-373514:-1:exon
so has part: feature:371737-371895:-1:exon
so has part: feature:370675-370891:-1:exon
so has part: feature:369686-369825:-1:exon
so has part: feature:368600-368683:-1:exon
so has part: feature:368339-368454:-1:exon
so has part: feature:368045-368204:-1:exon
so has part: feature:366473-367215:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:375445-375650:-1:exon

position:375445:-1
position: 375445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:375172-375323:-1:exon

position:375172:-1
position: 375172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375323:-1
position: 375323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:374220-374464:-1:exon

position:374220:-1
position: 374220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374464:-1
position: 374464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:373252-373514:-1:exon

position:373252:-1
position: 373252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:373514:-1
position: 373514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:371737-371895:-1:exon

position:371737:-1
position: 371737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:371895:-1
position: 371895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:370675-370891:-1:exon

position:370675:-1
position: 370675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370891:-1
position: 370891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:369686-369825:-1:exon

position:369686:-1
position: 369686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369825:-1
position: 369825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:368600-368683:-1:exon

position:368600:-1
position: 368600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368683:-1
position: 368683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:368339-368454:-1:exon

position:368339:-1
position: 368339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368454:-1
position: 368454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:368045-368204:-1:exon

position:368045:-1
position: 368045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368204:-1
position: 368204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:366473-367215:-1:exon

position:367215:-1
position: 367215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UBQLN4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: UBQLN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquilin-4
translation: MAELSSGGGGASSSSQPGGGGDGEAAAATGALIRVTVKTPKDKEEILTGERISVREFKEEISRRFKAKQEQLVLIFAGKILKDGDSLLQHGVKDGLTVHLVIKTPQKVQEPPGVTAASLPVPSATALPATGVVLSPPAAPASPAAPSQPSTSSSGLPDVGNSSWRSSALGATPGPAGEGTPSGATSILSGFGGVAGLGHLGMGSANFMELQQQMQRQLMSSPEMLSQIMENPLVQSMMSNPDFMRRMITANPQMQQLMERNPEITHMLNNPELMRQTMELARNPAMMQEMMRNQDRALSNLESVPGGYNALRRMYTDIQEPMFSAAREQFGNNPFSALSGSSDAANAQPLRTENREPLPNPWNPAAASQEPENGGSPEPVPSRSTPTVSNPLGINAAALGSGMFSSPEMQGLLQQVSENPQLMQSVISAPYMRTMLQTLAQNPEVAAQMMVNAPVFAGNPSLQEQLRLQLPAFLQQMQNPDSLSVLTNPRAMQALLQIQQGLQMLQTEAPGLVPSLGSLGTPQPPPPSAGGTAVLDPPLPSTSPAGDSNPSQQLMQHMVQLLSSANSQAQSPEVRFQQQLEQLSAMGFINREANLQALIATGGDINAAIERLLGFQAS
SIO_010081: UBQLN4
subclass of: SO_0000673
so part of: UBQLN4
location: complement(join(367063..367215,368045..368204,368339..368454,368600..368683,369686..369825,370675..370891,371737..371895,373252..373514,374220..374464,375172..375323,375445..375612))
location: region:367063-375612:-1
so has part: feature:375445-375612:-1:exon
so has part: feature:375172-375323:-1:exon
so has part: feature:374220-374464:-1:exon
so has part: feature:373252-373514:-1:exon
so has part: feature:371737-371895:-1:exon
so has part: feature:370675-370891:-1:exon
so has part: feature:369686-369825:-1:exon
so has part: feature:368600-368683:-1:exon
so has part: feature:368339-368454:-1:exon
so has part: feature:368045-368204:-1:exon
so has part: feature:367063-367215:-1:exon

XP_032089943.1
type: Protein
SIO_000068: ncbiprotein

position:367063:-1
position: 367063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375612:-1
position: 375612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375445-375612:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:375172-375323:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:374220-374464:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:373252-373514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:371737-371895:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:370675-370891:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:369686-369825:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:368600-368683:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:368339-368454:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:368045-368204:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:367063-367215:-1:exon

LAMTOR2
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: LAMTOR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 375755..379899
location: region:375755-379899:1
so has part: feature:375755-379899:1:exon
subclass of: SO_0000010

116519941
type: Gene
SIO_000068: ncbigene

position:375755:1
position: 375755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379899:1
position: 379899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375755-379899:1:exon

LAMTOR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: LAMTOR2
product: late endosomal/lysosomal adaptor, MAPK and MTOR activator 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_032234053.1
SIO_010081: LAMTOR2
subclass of: SO_0000673
so part of: LAMTOR2
location: join(375755..376109,377160..377322,377756..377845,379728..379899)
location: region:375755-379899:1
so has part: feature:375755-376109:1:exon
so has part: feature:377160-377322:1:exon
so has part: feature:377756-377845:1:exon
so has part: feature:379728-379899:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:375755-376109:1:exon

position:376109:1
position: 376109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:377160-377322:1:exon

position:377160:1
position: 377160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377322:1
position: 377322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:377756-377845:1:exon

position:377756:1
position: 377756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377845:1
position: 377845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:379728-379899:1:exon

position:379728:1
position: 379728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LAMTOR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: LAMTOR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ragulator complex protein LAMTOR2
translation: MLRPKALTQVLSQANTGGVQSTLLLNNEGSLLAYSGYGDTDARVTAAIASNIWVAYDKNGHQAFNEDNLKFILMDCMEGRVAITRVANLLLCMYAKETVGFGMLKAKAQALVQYLEEPLTQVAAS
SIO_010081: LAMTOR2
subclass of: SO_0000673
so part of: LAMTOR2
location: join(376042..376109,377160..377322,377756..377845,379728..379784)
location: region:376042-379784:1
so has part: feature:376042-376109:1:exon
so has part: feature:377160-377322:1:exon
so has part: feature:377756-377845:1:exon
so has part: feature:379728-379784:1:exon

XP_032089944.1
type: Protein
SIO_000068: ncbiprotein

position:376042:1
position: 376042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379784:1
position: 379784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376042-376109:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:377160-377322:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:377756-377845:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:379728-379784:1:exon

RAB25
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: RAB25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 385955..395604
location: region:385955-395604:1
so has part: feature:385955-395604:1:exon
subclass of: SO_0000010

116520094
type: Gene
SIO_000068: ncbigene

position:385955:1
position: 385955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:395604:1
position: 395604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:385955-395604:1:exon

RAB25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: RAB25
product: RAB25, member RAS oncogene family
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032234248.1
SIO_010081: RAB25
subclass of: SO_0000673
so part of: RAB25
location: join(385955..386013,390163..390384,391595..391788,392493..392573,393503..395604)
location: region:385955-395604:1
so has part: feature:385955-386013:1:exon
so has part: feature:390163-390384:1:exon
so has part: feature:391595-391788:1:exon
so has part: feature:392493-392573:1:exon
so has part: feature:393503-395604:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:385955-386013:1:exon

position:386013:1
position: 386013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:390163-390384:1:exon

position:390163:1
position: 390163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390384:1
position: 390384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:391595-391788:1:exon

position:391595:1
position: 391595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391788:1
position: 391788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:392493-392573:1:exon

position:392493:1
position: 392493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:392573:1
position: 392573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:393503-395604:1:exon

position:393503:1
position: 393503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RAB25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: RAB25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-25
translation: MAKAAAPDDNYNFVFKGERRTPPFFLPPVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTILVGDALVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDITKHQTYDVVERWLKELYDHAEATIVVMLVGNKTDLAQAREVPTEEARMYAENNGLLFVETSALDSTNVELAFETILRDIFNKVQKQKQKSPLDNKVSLSTESDTAASTSAAAEGKKSCCMNL
SIO_010081: RAB25
subclass of: SO_0000673
so part of: RAB25
location: join(385955..386013,390163..390384,391595..391788,392493..392573,393503..393639)
location: region:385955-393639:1
so has part: feature:385955-386013:1:exon
so has part: feature:390163-390384:1:exon
so has part: feature:391595-391788:1:exon
so has part: feature:392493-392573:1:exon
so has part: feature:393503-393639:1:exon

XP_032090139.1
type: Protein
SIO_000068: ncbiprotein

position:393639:1
position: 393639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:385955-386013:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:390163-390384:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:391595-391788:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:392493-392573:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:393503-393639:1:exon

LOC116520287
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: LOC116520287
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 397855..405906
location: region:397855-405906:1
so has part: feature:397855-405906:1:exon
subclass of: SO_0000010

116520287
type: Gene
SIO_000068: ncbigene

position:397855:1
position: 397855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405906:1
position: 405906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397855-405906:1:exon

LOC116520287
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: LOC116520287
product: ras-related protein Rab-11A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 160 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_032234452.1
SIO_010081: LOC116520287
subclass of: SO_0000673
so part of: LOC116520287
location: join(397855..398138,400998..401193,401943..402136,403356..403436,404622..405906)
location: region:397855-405906:1
so has part: feature:397855-398138:1:exon
so has part: feature:400998-401193:1:exon
so has part: feature:401943-402136:1:exon
so has part: feature:403356-403436:1:exon
so has part: feature:404622-405906:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:397855-398138:1:exon

position:398138:1
position: 398138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:400998-401193:1:exon

position:400998:1
position: 400998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401193:1
position: 401193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:401943-402136:1:exon

position:401943:1
position: 401943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402136:1
position: 402136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:403356-403436:1:exon

position:403356:1
position: 403356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403436:1
position: 403436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:404622-405906:1:exon

position:404622:1
position: 404622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116520287
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: LOC116520287
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-11A-like
translation: MRGKDDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKYLTYENAERWLKELQDHADANIVIMLVGNKSDLRHLRAVPTDEAKSFAEKNGLSFIETSALDSTNVETAFHNSLAEIYRIVSQRQLAGGQPETEFSHGTTIEPIKVLPTQQEARQTPCCQNI
SIO_010081: LOC116520287
subclass of: SO_0000673
so part of: LOC116520287
location: join(398099..398138,400998..401193,401943..402136,403356..403436,404622..404764)
location: region:398099-404764:1
so has part: feature:398099-398138:1:exon
so has part: feature:400998-401193:1:exon
so has part: feature:401943-402136:1:exon
so has part: feature:403356-403436:1:exon
so has part: feature:404622-404764:1:exon

XP_032090343.1
type: Protein
SIO_000068: ncbiprotein

position:398099:1
position: 398099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404764:1
position: 404764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:398099-398138:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:400998-401193:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:401943-402136:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:403356-403436:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:404622-404764:1:exon

MEX3A
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: MEX3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(426948..444809)
location: region:426948-444809:-1
so has part: feature:426948-444809:-1:exon
subclass of: SO_0000010

116520249
type: Gene
SIO_000068: ncbigene

position:426948:-1
position: 426948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444809:-1
position: 444809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426948-444809:-1:exon

MEX3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: MEX3A
product: mex-3 RNA binding family member A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins
transcript id: XM_032234412.1
SIO_010081: MEX3A
subclass of: SO_0000673
so part of: MEX3A
location: complement(join(426948..428050,444252..444372,444441..444809))
location: region:426948-444809:-1
so has part: feature:444441-444809:-1:exon
so has part: feature:444252-444372:-1:exon
so has part: feature:426948-428050:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:444441-444809:-1:exon

position:444441:-1
position: 444441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:444252-444372:-1:exon

position:444252:-1
position: 444252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444372:-1
position: 444372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:426948-428050:-1:exon

position:428050:-1
position: 428050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MEX3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: MEX3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein MEX3A
translation: MPSLVVSGIMERNGGFGDLGCFPGSSKDRALLEDDRALQLALDQLCLLGLGEPSAAAAAPSAAAAASALGGGGAADDSSGGQQAQPPPPPPPQQPAPPPPPPPPPPPASAQQPQQPPPPAAPKAGKLCVLYKEADLRLKSSSNTTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFMVTGRREDVAMARREIISAAEHFSMIRASRNKAGPAFGSAPTLPGQVTIRVRVPYRVVGLVVGPKGATIKRIQQQTNTYIITPSRDRDPVFEITGAPGNVERAREEIETHIAVRTGKILEYNNENDFLSSSPDSGMENRYSEAWRVHTPAPGCKPLSTFRQNSLGCIGDCSLDPAYETPRLNDQNDFNYSYLFPNYGVNKQDLYYGVPESGAPLWAGQENTNPVSVLFSKQRSGNASTLHPNSHRSPSSSIQEPPLSGLPRRSQGEPLQGFSKLGASATSRTSLSSSRECMVCFESEVTAALVPCGHNLFCMECAVRICERTDPECPVCHAAATQAIRIFS
SIO_010081: MEX3A
subclass of: SO_0000673
so part of: MEX3A
location: complement(join(426948..428050,444252..444372,444441..444809))
location: region:426948-444809:-1
so has part: feature:444441-444809:-1:exon
so has part: feature:444252-444372:-1:exon
so has part: feature:426948-428050:-1:exon

XP_032090303.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:444441-444809:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:444252-444372:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:426948-428050:-1:exon

LOC116520095
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: LOC116520095
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 488075..488737
location: region:488075-488737:1
so has part: feature:488075-488737:1:exon
subclass of: SO_0000010

116520095
type: Gene
SIO_000068: ncbigene

position:488075:1
position: 488075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:488737:1
position: 488737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:488075-488737:1:exon

LOC116520095
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: LOC116520095
product: prelamin-A/C-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032234249.1
SIO_010081: LOC116520095
subclass of: SO_0000673
so part of: LOC116520095
location: 488075..488737
location: region:488075-488737:1
so has part: feature:488075-488737:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:488075-488737:1:exon

LOC116520095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: LOC116520095
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prelamin-A/C-like
translation: METPAGQKRGPRSGAPPTAHSPARITRLQEKEDLQELNDRLAVYIDKVRSLESENAGLRLRVTESEEEVTREVVGIKAAYEAELGDARKTLDSVAKERARLQLELTKVREEFKELKAR
SIO_010081: LOC116520095
subclass of: SO_0000673
so part of: LOC116520095
location: 488381..488737
location: region:488381-488737:1
so has part: feature:488381-488737:1:exon

XP_032090140.1
type: Protein
SIO_000068: ncbiprotein

position:488381:1
position: 488381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:488381-488737:1:exon

LOC116520276
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: LOC116520276
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(538358..565404)
location: region:538358-565404:-1
so has part: feature:538358-565404:-1:exon
subclass of: SO_0000010

116520276
type: Gene
SIO_000068: ncbigene

position:538358:-1
position: 538358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:565404:-1
position: 565404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:538358-565404:-1:exon

LOC116520276
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: LOC116520276
product: prelamin-A/C-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032234439.1
SIO_010081: LOC116520276
subclass of: SO_0000673
so part of: LOC116520276
location: complement(join(538358..538611,563028..563276,564288..564380,565207..565404))
location: region:538358-565404:-1
so has part: feature:565207-565404:-1:exon
so has part: feature:564288-564380:-1:exon
so has part: feature:563028-563276:-1:exon
so has part: feature:538358-538611:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:565207-565404:-1:exon

position:565207:-1
position: 565207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:564288-564380:-1:exon

position:564288:-1
position: 564288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564380:-1
position: 564380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:563028-563276:-1:exon

position:563028:-1
position: 563028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:563276:-1
position: 563276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:538358-538611:-1:exon

position:538611:-1
position: 538611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116520276
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: LOC116520276
product: prelamin-A/C-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032234438.1
SIO_010081: LOC116520276
subclass of: SO_0000673
so part of: LOC116520276
location: complement(join(538358..538611,563028..563276,564288..564382,565002..565069))
location: region:538358-565069:-1
so has part: feature:565002-565069:-1:exon
so has part: feature:564288-564382:-1:exon
so has part: feature:563028-563276:-1:exon
so has part: feature:538358-538611:-1:exon

position:565069:-1
position: 565069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565002-565069:-1:exon

position:565002:-1
position: 565002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:564288-564382:-1:exon

position:564382:-1
position: 564382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:563028-563276:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:538358-538611:-1:exon

LOC116520276
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: LOC116520276
product: prelamin-A/C-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032234436.1
SIO_010081: LOC116520276
subclass of: SO_0000673
so part of: LOC116520276
location: complement(join(538358..538611,563028..563276,564288..565063))
location: region:538358-565063:-1
so has part: feature:564288-565063:-1:exon
so has part: feature:563028-563276:-1:exon
so has part: feature:538358-538611:-1:exon

position:565063:-1
position: 565063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:564288-565063:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:563028-563276:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:538358-538611:-1:exon

LOC116520276
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: LOC116520276
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prelamin-A/C-like isoform X1
translation: MGWTRNSPLIPPSLQEVAMQNLVRTVVVNDDDEEDDEDGPHDHHHHSHCSASGDPGEYNLRSRTVLCGTCGQPAEKSSGGTNVGTSTMSTGSSSSSLTITRSYRSGGTNLGESLLPRSYILGSSTPRQQDYITQGIRFSLQTGRL
SIO_010081: LOC116520276
subclass of: SO_0000673
so part of: LOC116520276
location: complement(join(538561..538611,563028..563276,564288..564425))
location: region:538561-564425:-1
so has part: feature:564288-564425:-1:exon
so has part: feature:563028-563276:-1:exon
so has part: feature:538561-538611:-1:exon

XP_032090327.1
type: Protein
SIO_000068: ncbiprotein

position:538561:-1
position: 538561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564425:-1
position: 564425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:564288-564425:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:563028-563276:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:538561-538611:-1:exon

LOC116520276
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: LOC116520276
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prelamin-A/C-like isoform X3
translation: MQNLVRTVVVNDDDEEDDEDGPHDHHHHSHCSASGDPGEYNLRSRTVLCGTCGQPAEKSSGGTNVGTSTMSTGSSSSSLTITRSYRSGGTNLGESLLPRSYILGSSTPRQQDYITQGIRFSLQTGRL
SIO_010081: LOC116520276
subclass of: SO_0000673
so part of: LOC116520276
location: complement(join(538561..538611,563028..563276,564288..564371))
location: region:538561-564371:-1
so has part: feature:564288-564371:-1:exon
so has part: feature:563028-563276:-1:exon
so has part: feature:538561-538611:-1:exon

XP_032090329.1
type: Protein
SIO_000068: ncbiprotein

position:564371:-1
position: 564371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:564288-564371:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:563028-563276:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:538561-538611:-1:exon

LOC116520276
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: LOC116520276
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prelamin-A/C-like isoform X3
translation: MQNLVRTVVVNDDDEEDDEDGPHDHHHHSHCSASGDPGEYNLRSRTVLCGTCGQPAEKSSGGTNVGTSTMSTGSSSSSLTITRSYRSGGTNLGESLLPRSYILGSSTPRQQDYITQGIRFSLQTGRL
SIO_010081: LOC116520276
subclass of: SO_0000673
so part of: LOC116520276
location: complement(join(538561..538611,563028..563276,564288..564371))
location: region:538561-564371:-1
so has part: feature:564288-564371:-1:exon
so has part: feature:563028-563276:-1:exon
so has part: feature:538561-538611:-1:exon

XP_032090330.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:564288-564371:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:563028-563276:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:538561-538611:-1:exon

LOC116520276
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: LOC116520276
product: prelamin-A/C-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_032234437.1
SIO_010081: LOC116520276
subclass of: SO_0000673
so part of: LOC116520276
location: complement(join(561342..561691,563028..563276,564288..565059))
location: region:561342-565059:-1
so has part: feature:564288-565059:-1:exon
so has part: feature:563028-563276:-1:exon
so has part: feature:561342-561691:-1:exon

position:561342:-1
position: 561342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:565059:-1
position: 565059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:564288-565059:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:563028-563276:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:561342-561691:-1:exon

position:561691:-1
position: 561691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116520276
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: LOC116520276
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prelamin-A/C-like isoform X2
translation: MGWTRNSPLIPPSLQEVAMQNLVRTVVVNDDDEEDDEDGPHDHHHHSHCSASGDPGEYNLRSRTVLCGTCGQPAEKSSGGTNVGTSTMSTGSSSSSLTITRSYRSGGTNLGESLLPRSYILGSSTPRQQGPSNCSIM
SIO_010081: LOC116520276
subclass of: SO_0000673
so part of: LOC116520276
location: complement(join(561665..561691,563028..563276,564288..564425))
location: region:561665-564425:-1
so has part: feature:564288-564425:-1:exon
so has part: feature:563028-563276:-1:exon
so has part: feature:561665-561691:-1:exon

XP_032090328.1
type: Protein
SIO_000068: ncbiprotein

position:561665:-1
position: 561665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:564288-564425:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:563028-563276:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:561665-561691:-1:exon

LOC116520278
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: LOC116520278
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 565412..565946
location: region:565412-565946:1
so has part: feature:565412-565946:1:exon
subclass of: SO_0000011

116520278
type: Gene
SIO_000068: ncbigene

position:565412:1
position: 565412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:565946:1
position: 565946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565412-565946:1:exon

LOC116520278
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 35005
nc RNA class: lncRNA
gene: LOC116520278
product: uncharacterized LOC116520278
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XR_004256744.1
SIO_010081: LOC116520278
subclass of: SO_0000673
so part of: LOC116520278
location: join(565412..565517,565654..565946)
location: region:565412-565946:1
so has part: feature:565412-565517:1:exon
so has part: feature:565654-565946:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:565412-565517:1:exon

position:565517:1
position: 565517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:565654-565946:1:exon

position:565654:1
position: 565654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116520277
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: LOC116520277
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(583319..597847)
location: region:583319-597847:-1
so has part: feature:583319-597847:-1:exon
subclass of: SO_0000011

116520277
type: Gene
SIO_000068: ncbigene

position:583319:-1
position: 583319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597847:-1
position: 597847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:583319-597847:-1:exon

LOC116520277
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 35005
nc RNA class: lncRNA
gene: LOC116520277
product: uncharacterized LOC116520277
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_004256743.1
SIO_010081: LOC116520277
subclass of: SO_0000673
so part of: LOC116520277
location: complement(join(583319..583583,595105..595413,597756..597847))
location: region:583319-597847:-1
so has part: feature:597756-597847:-1:exon
so has part: feature:595105-595413:-1:exon
so has part: feature:583319-583583:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:597756-597847:-1:exon

position:597756:-1
position: 597756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:595105-595413:-1:exon

position:595105:-1
position: 595105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:595413:-1
position: 595413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:583319-583583:-1:exon

position:583583:-1
position: 583583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116520273
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: LOC116520273
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(719725..772412)
location: region:719725-772412:-1
so has part: feature:719725-772412:-1:exon

116520273
type: Gene
SIO_000068: ncbigene

position:719725:-1
position: 719725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:772412:-1
position: 772412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:719725-772412:-1:exon

LOC116520273
type: Exon
subclass of: SO_0000147
RO_0002162: 35005
gene: LOC116520273
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 155 Proteins, and 24% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116520273
subclass of: SO_0000673
so part of: LOC116520273
location: complement(719725..721983)
location: region:719725-721983:-1
so has part: feature:719725-721983:-1:exon

position:721983:-1
position: 721983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:719725-721983:-1:exon

LOC116520273
type: Exon
subclass of: SO_0000147
RO_0002162: 35005
gene: LOC116520273
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 155 Proteins, and 24% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116520273
subclass of: SO_0000673
so part of: LOC116520273
location: complement(727287..727297)
location: region:727287-727297:-1
so has part: feature:727287-727297:-1:exon

position:727287:-1
position: 727287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:727297:-1
position: 727297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:727287-727297:-1:exon

LOC116520273
type: Exon
subclass of: SO_0000147
RO_0002162: 35005
gene: LOC116520273
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 155 Proteins, and 24% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116520273
subclass of: SO_0000673
so part of: LOC116520273
location: complement(738545..739904)
location: region:738545-739904:-1
so has part: feature:738545-739904:-1:exon

position:738545:-1
position: 738545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:739904:-1
position: 739904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:738545-739904:-1:exon

LOC116520273
type: Exon
subclass of: SO_0000147
RO_0002162: 35005
gene: LOC116520273
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 155 Proteins, and 24% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116520273
subclass of: SO_0000673
so part of: LOC116520273
location: complement(757889..757896)
location: region:757889-757896:-1
so has part: feature:757889-757896:-1:exon

position:757889:-1
position: 757889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:757896:-1
position: 757896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:757889-757896:-1:exon

LOC116520273
type: Exon
subclass of: SO_0000147
RO_0002162: 35005
gene: LOC116520273
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 155 Proteins, and 24% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116520273
subclass of: SO_0000673
so part of: LOC116520273
location: complement(770508..772412)
location: region:770508-772412:-1
so has part: feature:770508-772412:-1:exon

position:770508:-1
position: 770508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:770508-772412:-1:exon

LOC116520274
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: LOC116520274
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(832190..869096)
location: region:832190-869096:-1
so has part: feature:832190-869096:-1:exon

116520274
type: Gene
SIO_000068: ncbigene

position:832190:-1
position: 832190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:869096:-1
position: 869096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:832190-869096:-1:exon

LOC116520274
type: Exon
subclass of: SO_0000147
RO_0002162: 35005
gene: LOC116520274
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 54% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116520274
subclass of: SO_0000673
so part of: LOC116520274
location: complement(832190..833887)
location: region:832190-833887:-1
so has part: feature:832190-833887:-1:exon

position:833887:-1
position: 833887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:832190-833887:-1:exon

LOC116519871
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: LOC116519871
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 835939..846581
location: region:835939-846581:1
so has part: feature:835939-846581:1:exon

116519871
type: Gene
SIO_000068: ncbigene

position:835939:1
position: 835939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:846581:1
position: 846581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:835939-846581:1:exon

LOC116519871
type: Exon
subclass of: SO_0000147
RO_0002162: 35005
gene: LOC116519871
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116519871
subclass of: SO_0000673
so part of: LOC116519871
location: 835939..836099
location: region:835939-836099:1
so has part: feature:835939-836099:1:exon

position:836099:1
position: 836099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:835939-836099:1:exon

LOC116519871
type: Exon
subclass of: SO_0000147
RO_0002162: 35005
gene: LOC116519871
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116519871
subclass of: SO_0000673
so part of: LOC116519871
location: 837133..837481
location: region:837133-837481:1
so has part: feature:837133-837481:1:exon

position:837133:1
position: 837133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:837481:1
position: 837481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:837133-837481:1:exon

LOC116519871
type: Exon
subclass of: SO_0000147
RO_0002162: 35005
gene: LOC116519871
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116519871
subclass of: SO_0000673
so part of: LOC116519871
location: 837764..837889
location: region:837764-837889:1
so has part: feature:837764-837889:1:exon

position:837764:1
position: 837764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:837889:1
position: 837889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:837764-837889:1:exon

LOC116519871
type: Exon
subclass of: SO_0000147
RO_0002162: 35005
gene: LOC116519871
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116519871
subclass of: SO_0000673
so part of: LOC116519871
location: 838352..838563
location: region:838352-838563:1
so has part: feature:838352-838563:1:exon

position:838352:1
position: 838352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:838563:1
position: 838563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:838352-838563:1:exon

LOC116519871
type: Exon
subclass of: SO_0000147
RO_0002162: 35005
gene: LOC116519871
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116519871
subclass of: SO_0000673
so part of: LOC116519871
location: 838965..839175
location: region:838965-839175:1
so has part: feature:838965-839175:1:exon

position:838965:1
position: 838965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:839175:1
position: 839175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:838965-839175:1:exon

LOC116519871
type: Exon
subclass of: SO_0000147
RO_0002162: 35005
gene: LOC116519871
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116519871
subclass of: SO_0000673
so part of: LOC116519871
location: 840451..840558
location: region:840451-840558:1
so has part: feature:840451-840558:1:exon

position:840451:1
position: 840451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:840558:1
position: 840558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:840451-840558:1:exon

LOC116519871
type: Exon
subclass of: SO_0000147
RO_0002162: 35005
gene: LOC116519871
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116519871
subclass of: SO_0000673
so part of: LOC116519871
location: 840852..840972
location: region:840852-840972:1
so has part: feature:840852-840972:1:exon

position:840852:1
position: 840852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:840972:1
position: 840972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:840852-840972:1:exon

LOC116519871
type: Exon
subclass of: SO_0000147
RO_0002162: 35005
gene: LOC116519871
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116519871
subclass of: SO_0000673
so part of: LOC116519871
location: 841713..841805
location: region:841713-841805:1
so has part: feature:841713-841805:1:exon

position:841713:1
position: 841713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:841805:1
position: 841805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:841713-841805:1:exon

LOC116519871
type: Exon
subclass of: SO_0000147
RO_0002162: 35005
gene: LOC116519871
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116519871
subclass of: SO_0000673
so part of: LOC116519871
location: 845936..846581
location: region:845936-846581:1
so has part: feature:845936-846581:1:exon

position:845936:1
position: 845936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:845936-846581:1:exon

LOC116520274
type: Exon
subclass of: SO_0000147
RO_0002162: 35005
gene: LOC116520274
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 54% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116520274
subclass of: SO_0000673
so part of: LOC116520274
location: complement(860172..860184)
location: region:860172-860184:-1
so has part: feature:860172-860184:-1:exon

position:860172:-1
position: 860172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:860184:-1
position: 860184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:860172-860184:-1:exon

LOC116520274
type: Exon
subclass of: SO_0000147
RO_0002162: 35005
gene: LOC116520274
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 54% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116520274
subclass of: SO_0000673
so part of: LOC116520274
location: complement(867953..869096)
location: region:867953-869096:-1
so has part: feature:867953-869096:-1:exon

position:867953:-1
position: 867953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:867953-869096:-1:exon

LOC116520279
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: LOC116520279
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(869123..872345)
location: region:869123-872345:-1
so has part: feature:869123-872345:-1:exon
subclass of: SO_0000011

116520279
type: Gene
SIO_000068: ncbigene

position:869123:-1
position: 869123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:872345:-1
position: 872345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:869123-872345:-1:exon

LOC116520279
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 35005
nc RNA class: lncRNA
gene: LOC116520279
product: uncharacterized LOC116520279
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_004256745.1
SIO_010081: LOC116520279
subclass of: SO_0000673
so part of: LOC116520279
location: complement(join(869123..869164,869301..869520,871768..872345))
location: region:869123-872345:-1
so has part: feature:871768-872345:-1:exon
so has part: feature:869301-869520:-1:exon
so has part: feature:869123-869164:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:871768-872345:-1:exon

position:871768:-1
position: 871768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:869301-869520:-1:exon

position:869301:-1
position: 869301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:869520:-1
position: 869520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:869123-869164:-1:exon

position:869164:-1
position: 869164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116520275
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: LOC116520275
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<902885..904632)
location: region:902885-904632:-1
so has part: feature:902885-904632:-1:exon
subclass of: SO_0000010

116520275
type: Gene
SIO_000068: ncbigene

position:902885:-1
position: 902885
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:904632:-1
position: 904632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:902885-904632:-1:exon

LOC116520275
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: LOC116520275
product: zinc finger protein 665-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_032234435.1
SIO_010081: LOC116520275
subclass of: SO_0000673
so part of: LOC116520275
location: complement(join(<902885..904415,904552..904632))
location: region:902885-904632:-1
so has part: feature:904552-904632:-1:exon
so has part: feature:902885-904415:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:904552-904632:-1:exon

position:904552:-1
position: 904552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:902885-904415:-1:exon

position:904415:-1
position: 904415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116520275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: LOC116520275
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 665-like
translation: MSPAGARERRLPGGGCGEEETGGDAETGLEGGGSFGRPRNPQRIQEEEERYQCPECEKFFKRNQCLRKHLKVHSGEKPHKCLECGKSFSQRSNLYAHQRIHTGEKPHKCLECGKSFNQRSNLYAHQKIHTGEKPHKCLLCGKRFSRRSNLYAHQSIHSGEKPHKCLQCGKSFSQSGSLYRHQRIHTGEKPHECLECGKSFSQSSSLYAHQRIHTGEKPHKCLECRKSFSQSSSLYVHQRIHTGEKPHKCLECGKSFSQSSSLYAHQRIHTGEKPHKCLECGKSFSERNSLYAHQRIHTGEKSHKCLECGKSFIERGHLYKHQRIHTGEKPHKCLECGKSFSQRSNLYAHQRIHTEEKPNKCLECGKSFSRRSHLYVHQRIHTGEKPHKCLECGKSFSQRGHLYKHQRIHTGEKPHKCLECGKNFSQRSNLYAHQRIHTGEKPNKCLECGKSFSQRSHLYAHQRIHTG
SIO_010081: LOC116520275
subclass of: SO_0000673
so part of: LOC116520275
location: complement(<902885..904285)
location: region:902885-904285:-1
so has part: feature:902885-904285:-1:exon

XP_032090326.1
type: Protein
SIO_000068: ncbiprotein

position:904285:-1
position: 904285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:902885-904285:-1:exon

LOC116519841
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: LOC116519841
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(907853..913859)
location: region:907853-913859:-1
so has part: feature:907853-913859:-1:exon
subclass of: SO_0000010

116519841
type: Gene
SIO_000068: ncbigene

position:907853:-1
position: 907853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:913859:-1
position: 913859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:907853-913859:-1:exon

LOC116519841
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: LOC116519841
product: lamin-A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_032233902.1
SIO_010081: LOC116519841
subclass of: SO_0000673
so part of: LOC116519841
location: complement(join(907853..908053,912442..912533,913310..913429,913724..913859))
location: region:907853-913859:-1
so has part: feature:913724-913859:-1:exon
so has part: feature:913310-913429:-1:exon
so has part: feature:912442-912533:-1:exon
so has part: feature:907853-908053:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:913724-913859:-1:exon

position:913724:-1
position: 913724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:913310-913429:-1:exon

position:913310:-1
position: 913310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:913429:-1
position: 913429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:912442-912533:-1:exon

position:912442:-1
position: 912442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:912533:-1
position: 912533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:907853-908053:-1:exon

position:908053:-1
position: 908053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116519841
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: LOC116519841
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lamin-A-like
translation: MVWKNQSSWGSGDSLRTALLTSSGEEGAMRKLVRTVVVNDDDEEDDEDGATATTTTATAVPAEIRASTTCVLAQCCVAHVGSRQRSHPGARMWAPAPCPPAPPPPA
SIO_010081: LOC116519841
subclass of: SO_0000673
so part of: LOC116519841
location: complement(join(907900..908053,912442..912533,913310..913384))
location: region:907900-913384:-1
so has part: feature:913310-913384:-1:exon
so has part: feature:912442-912533:-1:exon
so has part: feature:907900-908053:-1:exon

XP_032089793.1
type: Protein
SIO_000068: ncbiprotein

position:907900:-1
position: 907900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:913384:-1
position: 913384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:913310-913384:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:912442-912533:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:907900-908053:-1:exon

PRPF3
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: PRPF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(922001..933610)
location: region:922001-933610:-1
so has part: feature:922001-933610:-1:exon
subclass of: SO_0000010

116519816
type: Gene
SIO_000068: ncbigene

position:922001:-1
position: 922001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:933610:-1
position: 933610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:922001-933610:-1:exon

PRPF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: PRPF3
product: pre-mRNA processing factor 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_032233865.1
SIO_010081: PRPF3
subclass of: SO_0000673
so part of: PRPF3
location: complement(join(922001..922696,923074..923135,924542..924625,925193..925311,925401..925514,925880..925979,926077..926220,926416..926498,926583..926749,926902..927208,927567..927614,927705..927925,928076..928159,928456..928602,932430..932560,932914..933084,933328..933610))
location: region:922001-933610:-1
so has part: feature:933328-933610:-1:exon
so has part: feature:932914-933084:-1:exon
so has part: feature:932430-932560:-1:exon
so has part: feature:928456-928602:-1:exon
so has part: feature:928076-928159:-1:exon
so has part: feature:927705-927925:-1:exon
so has part: feature:927567-927614:-1:exon
so has part: feature:926902-927208:-1:exon
so has part: feature:926583-926749:-1:exon
so has part: feature:926416-926498:-1:exon
so has part: feature:926077-926220:-1:exon
so has part: feature:925880-925979:-1:exon
so has part: feature:925401-925514:-1:exon
so has part: feature:925193-925311:-1:exon
so has part: feature:924542-924625:-1:exon
so has part: feature:923074-923135:-1:exon
so has part: feature:922001-922696:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:933328-933610:-1:exon

position:933328:-1
position: 933328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:932914-933084:-1:exon

position:932914:-1
position: 932914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:933084:-1
position: 933084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:932430-932560:-1:exon

position:932430:-1
position: 932430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:932560:-1
position: 932560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:928456-928602:-1:exon

position:928456:-1
position: 928456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:928602:-1
position: 928602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:928076-928159:-1:exon

position:928076:-1
position: 928076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:928159:-1
position: 928159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:927705-927925:-1:exon

position:927705:-1
position: 927705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:927925:-1
position: 927925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:927567-927614:-1:exon

position:927567:-1
position: 927567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:927614:-1
position: 927614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:926902-927208:-1:exon

position:926902:-1
position: 926902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:927208:-1
position: 927208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:926583-926749:-1:exon

position:926583:-1
position: 926583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:926749:-1
position: 926749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:926416-926498:-1:exon

position:926416:-1
position: 926416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:926498:-1
position: 926498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:926077-926220:-1:exon

position:926077:-1
position: 926077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:926220:-1
position: 926220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:925880-925979:-1:exon

position:925880:-1
position: 925880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:925979:-1
position: 925979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:925401-925514:-1:exon

position:925401:-1
position: 925401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:925514:-1
position: 925514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:925193-925311:-1:exon

position:925193:-1
position: 925193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:925311:-1
position: 925311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:924542-924625:-1:exon

position:924542:-1
position: 924542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:924625:-1
position: 924625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:923074-923135:-1:exon

position:923074:-1
position: 923074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:923135:-1
position: 923135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:922001-922696:-1:exon

position:922696:-1
position: 922696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PRPF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: PRPF3
product: pre-mRNA processing factor 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_032233866.1
SIO_010081: PRPF3
subclass of: SO_0000673
so part of: PRPF3
location: complement(join(922001..922696,923074..923135,924542..924625,925193..925311,925401..925514,925880..925979,926077..926220,926416..926498,926583..926749,926902..927208,927567..927614,927705..927925,928076..928159,928456..928602,930086..930173))
location: region:922001-930173:-1
so has part: feature:930086-930173:-1:exon
so has part: feature:928456-928602:-1:exon
so has part: feature:928076-928159:-1:exon
so has part: feature:927705-927925:-1:exon
so has part: feature:927567-927614:-1:exon
so has part: feature:926902-927208:-1:exon
so has part: feature:926583-926749:-1:exon
so has part: feature:926416-926498:-1:exon
so has part: feature:926077-926220:-1:exon
so has part: feature:925880-925979:-1:exon
so has part: feature:925401-925514:-1:exon
so has part: feature:925193-925311:-1:exon
so has part: feature:924542-924625:-1:exon
so has part: feature:923074-923135:-1:exon
so has part: feature:922001-922696:-1:exon

position:930173:-1
position: 930173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:930086-930173:-1:exon

position:930086:-1
position: 930086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:928456-928602:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:928076-928159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:927705-927925:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:927567-927614:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:926902-927208:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:926583-926749:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:926416-926498:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:926077-926220:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:925880-925979:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:925401-925514:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:925193-925311:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:924542-924625:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:923074-923135:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:922001-922696:-1:exon

PRPF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: PRPF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1
translation: MALSKRELDELKPWVEKTVKRVLGFSEPTVVTAALNCVGKGMDKKKAADHLKPFLDDSTLRFVDKLFEAVEEGRSSRHSKSNSDRNRKRELKDVFGDDSEISKESSGVKKRRIPRFEEVEEEPEVIPGPPTESPGMLTKLQIKQMMEAATRQIEERKKQLSFISSPAPQPKAPSTTPPERLPIGNTIQPSQAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNTNMVGLANLHAMGITPPAEIRHMGSNVQSPYTRKVELKDQSKPTPLILDEQGRTVDATGKEVELTHRMPTLKANIRAVKREQFKQQLKEKPSEDMESNTYFDARVSAAPAQRPKRTFRFHDKGKFEKIAQRLRTKAQLEKLQAEISQAAKKTGIHTSTKLALITPKKEVKEGDIPEVEWWDSYIIPNGMDIKATDLLKREDYFGITNLVEHPAQLSPPVDSDLPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTVEQRKAKKVKKLKEDISQGVHIAVYRVRNLGNPAKKFKIEANASQLYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLMLHRIKWDEQTSNTKGDDDDESDEESMKKTNKCSLVWEGTAKERSFGEMKFKQCPTENMAREHFKKHGTEHYWDLALSESVLEPTD
SIO_010081: PRPF3
subclass of: SO_0000673
so part of: PRPF3
location: complement(join(922550..922696,923074..923135,924542..924625,925193..925311,925401..925514,925880..925979,926077..926220,926416..926498,926583..926749,926902..927208,927567..927614,927705..927925,928076..928159,928456..928602,932430..932560,932914..933058))
location: region:922550-933058:-1
so has part: feature:932914-933058:-1:exon
so has part: feature:932430-932560:-1:exon
so has part: feature:928456-928602:-1:exon
so has part: feature:928076-928159:-1:exon
so has part: feature:927705-927925:-1:exon
so has part: feature:927567-927614:-1:exon
so has part: feature:926902-927208:-1:exon
so has part: feature:926583-926749:-1:exon
so has part: feature:926416-926498:-1:exon
so has part: feature:926077-926220:-1:exon
so has part: feature:925880-925979:-1:exon
so has part: feature:925401-925514:-1:exon
so has part: feature:925193-925311:-1:exon
so has part: feature:924542-924625:-1:exon
so has part: feature:923074-923135:-1:exon
so has part: feature:922550-922696:-1:exon

XP_032089756.1
type: Protein
SIO_000068: ncbiprotein

position:922550:-1
position: 922550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:933058:-1
position: 933058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:932914-933058:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:932430-932560:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:928456-928602:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:928076-928159:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:927705-927925:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:927567-927614:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:926902-927208:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:926583-926749:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:926416-926498:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:926077-926220:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:925880-925979:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:925401-925514:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:925193-925311:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:924542-924625:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:923074-923135:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:922550-922696:-1:exon

PRPF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: PRPF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U4/U6 small nuclear ribonucleoprotein Prp3 isoform X2
translation: MDVFGDDSEISKESSGVKKRRIPRFEEVEEEPEVIPGPPTESPGMLTKLQIKQMMEAATRQIEERKKQLSFISSPAPQPKAPSTTPPERLPIGNTIQPSQAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNTNMVGLANLHAMGITPPAEIRHMGSNVQSPYTRKVELKDQSKPTPLILDEQGRTVDATGKEVELTHRMPTLKANIRAVKREQFKQQLKEKPSEDMESNTYFDARVSAAPAQRPKRTFRFHDKGKFEKIAQRLRTKAQLEKLQAEISQAAKKTGIHTSTKLALITPKKEVKEGDIPEVEWWDSYIIPNGMDIKATDLLKREDYFGITNLVEHPAQLSPPVDSDLPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTVEQRKAKKVKKLKEDISQGVHIAVYRVRNLGNPAKKFKIEANASQLYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLMLHRIKWDEQTSNTKGDDDDESDEESMKKTNKCSLVWEGTAKERSFGEMKFKQCPTENMAREHFKKHGTEHYWDLALSESVLEPTD
SIO_010081: PRPF3
subclass of: SO_0000673
so part of: PRPF3
location: complement(join(922550..922696,923074..923135,924542..924625,925193..925311,925401..925514,925880..925979,926077..926220,926416..926498,926583..926749,926902..927208,927567..927614,927705..927925,928076..928159,928456..928602,930086..930088))
location: region:922550-930088:-1
so has part: feature:930086-930088:-1:exon
so has part: feature:928456-928602:-1:exon
so has part: feature:928076-928159:-1:exon
so has part: feature:927705-927925:-1:exon
so has part: feature:927567-927614:-1:exon
so has part: feature:926902-927208:-1:exon
so has part: feature:926583-926749:-1:exon
so has part: feature:926416-926498:-1:exon
so has part: feature:926077-926220:-1:exon
so has part: feature:925880-925979:-1:exon
so has part: feature:925401-925514:-1:exon
so has part: feature:925193-925311:-1:exon
so has part: feature:924542-924625:-1:exon
so has part: feature:923074-923135:-1:exon
so has part: feature:922550-922696:-1:exon

XP_032089757.1
type: Protein
SIO_000068: ncbiprotein

position:930088:-1
position: 930088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:930086-930088:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:928456-928602:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:928076-928159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:927705-927925:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:927567-927614:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:926902-927208:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:926583-926749:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:926416-926498:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:926077-926220:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:925880-925979:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:925401-925514:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:925193-925311:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:924542-924625:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:923074-923135:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:922550-922696:-1:exon

MRPS21
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: MRPS21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(933736..934843)
location: region:933736-934843:-1
so has part: feature:933736-934843:-1:exon
subclass of: SO_0000010

116519842
type: Gene
SIO_000068: ncbigene

position:933736:-1
position: 933736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:934843:-1
position: 934843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:933736-934843:-1:exon

MRPS21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: MRPS21
product: mitochondrial ribosomal protein S21
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_032233903.1
SIO_010081: MRPS21
subclass of: SO_0000673
so part of: MRPS21
location: complement(join(933736..933984,934627..934843))
location: region:933736-934843:-1
so has part: feature:934627-934843:-1:exon
so has part: feature:933736-933984:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:934627-934843:-1:exon

position:934627:-1
position: 934627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:933736-933984:-1:exon

position:933984:-1
position: 933984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MRPS21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: MRPS21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 28S ribosomal protein S21, mitochondrial
translation: MAHHAKFLARTVMVPGKDVELAYRVLTRVLTVDGIIDHVKRKRYFEKPCQKRRREAYEACRRIYNSEMGKKINFLMRKNRADPWLGC
SIO_010081: MRPS21
subclass of: SO_0000673
so part of: MRPS21
location: complement(join(933804..933984,934627..934709))
location: region:933804-934709:-1
so has part: feature:934627-934709:-1:exon
so has part: feature:933804-933984:-1:exon

XP_032089794.1
type: Protein
SIO_000068: ncbiprotein

position:933804:-1
position: 933804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:934709:-1
position: 934709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:934627-934709:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:933804-933984:-1:exon

CIART
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: CIART
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(936050..958664)
location: region:936050-958664:-1
so has part: feature:936050-958664:-1:exon
subclass of: SO_0000010

116519825
type: Gene
SIO_000068: ncbigene

position:936050:-1
position: 936050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:958664:-1
position: 958664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:936050-958664:-1:exon

CIART
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: CIART
product: circadian associated repressor of transcription, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_032233879.1
SIO_010081: CIART
subclass of: SO_0000673
so part of: CIART
location: complement(join(936050..936747,937861..937987,938252..938330,938917..938992,939503..940061,956724..956782,956972..957034,958577..958664))
location: region:936050-958664:-1
so has part: feature:958577-958664:-1:exon
so has part: feature:956972-957034:-1:exon
so has part: feature:956724-956782:-1:exon
so has part: feature:939503-940061:-1:exon
so has part: feature:938917-938992:-1:exon
so has part: feature:938252-938330:-1:exon
so has part: feature:937861-937987:-1:exon
so has part: feature:936050-936747:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:958577-958664:-1:exon

position:958577:-1
position: 958577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:956972-957034:-1:exon

position:956972:-1
position: 956972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:957034:-1
position: 957034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:956724-956782:-1:exon

position:956724:-1
position: 956724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:956782:-1
position: 956782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:939503-940061:-1:exon

position:939503:-1
position: 939503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:940061:-1
position: 940061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:938917-938992:-1:exon

position:938917:-1
position: 938917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:938992:-1
position: 938992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:938252-938330:-1:exon

position:938252:-1
position: 938252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:938330:-1
position: 938330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:937861-937987:-1:exon

position:937861:-1
position: 937861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:937987:-1
position: 937987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:936050-936747:-1:exon

position:936747:-1
position: 936747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CIART
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: CIART
product: circadian associated repressor of transcription, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_032233880.1
SIO_010081: CIART
subclass of: SO_0000673
so part of: CIART
location: complement(join(936050..936747,937861..937987,938252..938330,938917..938992,939503..940061,941274..941432))
location: region:936050-941432:-1
so has part: feature:941274-941432:-1:exon
so has part: feature:939503-940061:-1:exon
so has part: feature:938917-938992:-1:exon
so has part: feature:938252-938330:-1:exon
so has part: feature:937861-937987:-1:exon
so has part: feature:936050-936747:-1:exon

position:941432:-1
position: 941432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:941274-941432:-1:exon

position:941274:-1
position: 941274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:939503-940061:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:938917-938992:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:938252-938330:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:937861-937987:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:936050-936747:-1:exon

CIART
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: CIART
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: circadian-associated transcriptional repressor
translation: MGDMDKRSFSSRESFHSVESATSEEEEGEEEQLLSPKGKFRIFLLGDGKEAKLPRHRCLQGSGFLLLPGLPGQGPKRPLGLQPPGSACLHGPEGPKETLCSRRVSPNGSLPGQRVKRKRAEGSGGCTRQSSPTGGSRPPPCPTASVPSPGIKRPRRKEALAAEETPRWSSSGTEGDQAFAQKCWELQGFVRPLSELLNRLKMGCFDQGLSSFQQSVAMDRIQRIIGVLQKPQMGGRYLGILLQVEKMLKIWFPRVPLKDSQASYSVSARGRCEAAKSRCVEEQITGSRSASIQDDMLKPFSDVSSLEDHDVGTRQGEPVPMGNGPALNLSWIHTLPLNPLLGQVDFNQINSVLGQILLGPNASNCGVVFFLQKVMFTQAASKTLEHGCPPGMLFSGSGEPPRCQSLPGVLTASCSAPSLGRLSLLLPHLSGEKLERSEASVGKPVKCRSS
SIO_010081: CIART
subclass of: SO_0000673
so part of: CIART
location: complement(join(936223..936747,937861..937987,938252..938330,938917..938992,939503..940048))
location: region:936223-940048:-1
so has part: feature:939503-940048:-1:exon
so has part: feature:938917-938992:-1:exon
so has part: feature:938252-938330:-1:exon
so has part: feature:937861-937987:-1:exon
so has part: feature:936223-936747:-1:exon

XP_032089770.1
type: Protein
SIO_000068: ncbiprotein

position:936223:-1
position: 936223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:940048:-1
position: 940048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:939503-940048:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:938917-938992:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:938252-938330:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:937861-937987:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:936223-936747:-1:exon

CIART
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: CIART
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: circadian-associated transcriptional repressor
translation: MGDMDKRSFSSRESFHSVESATSEEEEGEEEQLLSPKGKFRIFLLGDGKEAKLPRHRCLQGSGFLLLPGLPGQGPKRPLGLQPPGSACLHGPEGPKETLCSRRVSPNGSLPGQRVKRKRAEGSGGCTRQSSPTGGSRPPPCPTASVPSPGIKRPRRKEALAAEETPRWSSSGTEGDQAFAQKCWELQGFVRPLSELLNRLKMGCFDQGLSSFQQSVAMDRIQRIIGVLQKPQMGGRYLGILLQVEKMLKIWFPRVPLKDSQASYSVSARGRCEAAKSRCVEEQITGSRSASIQDDMLKPFSDVSSLEDHDVGTRQGEPVPMGNGPALNLSWIHTLPLNPLLGQVDFNQINSVLGQILLGPNASNCGVVFFLQKVMFTQAASKTLEHGCPPGMLFSGSGEPPRCQSLPGVLTASCSAPSLGRLSLLLPHLSGEKLERSEASVGKPVKCRSS
SIO_010081: CIART
subclass of: SO_0000673
so part of: CIART
location: complement(join(936223..936747,937861..937987,938252..938330,938917..938992,939503..940048))
location: region:936223-940048:-1
so has part: feature:939503-940048:-1:exon
so has part: feature:938917-938992:-1:exon
so has part: feature:938252-938330:-1:exon
so has part: feature:937861-937987:-1:exon
so has part: feature:936223-936747:-1:exon

XP_032089771.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:939503-940048:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:938917-938992:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:938252-938330:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:937861-937987:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:936223-936747:-1:exon

CA14
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: CA14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 943732..950265
location: region:943732-950265:1
so has part: feature:943732-950265:1:exon
subclass of: SO_0000010

116519834
type: Gene
SIO_000068: ncbigene

position:943732:1
position: 943732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:950265:1
position: 950265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:943732-950265:1:exon

CA14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: CA14
product: carbonic anhydrase 14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_032233893.1
SIO_010081: CA14
subclass of: SO_0000673
so part of: CA14
location: join(943732..943936,945847..945867,946121..946300,946493..946638,947230..947325,948061..948130,948885..949042,949207..949333,949521..949541,949952..950265)
location: region:943732-950265:1
so has part: feature:943732-943936:1:exon
so has part: feature:945847-945867:1:exon
so has part: feature:946121-946300:1:exon
so has part: feature:946493-946638:1:exon
so has part: feature:947230-947325:1:exon
so has part: feature:948061-948130:1:exon
so has part: feature:948885-949042:1:exon
so has part: feature:949207-949333:1:exon
so has part: feature:949521-949541:1:exon
so has part: feature:949952-950265:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:943732-943936:1:exon

position:943936:1
position: 943936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:945847-945867:1:exon

position:945847:1
position: 945847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:945867:1
position: 945867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:946121-946300:1:exon

position:946121:1
position: 946121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:946300:1
position: 946300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:946493-946638:1:exon

position:946493:1
position: 946493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:946638:1
position: 946638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:947230-947325:1:exon

position:947230:1
position: 947230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:947325:1
position: 947325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:948061-948130:1:exon

position:948061:1
position: 948061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:948130:1
position: 948130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:948885-949042:1:exon

position:948885:1
position: 948885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:949042:1
position: 949042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:949207-949333:1:exon

position:949207:1
position: 949207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:949333:1
position: 949333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:949521-949541:1:exon

position:949521:1
position: 949521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:949541:1
position: 949541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:949952-950265:1:exon

position:949952:1
position: 949952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CA14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: CA14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbonic anhydrase 14
translation: MLLVLSLWQALSQALAAGGGSHWTYEGSEGQTHWAERYPDCGWQAQSPLDIQTDLVQYDPSLPPIEPEGYRDPGSGSLTLTNNGHTVQLSLPENLHLHGLPSLYSAVQLHLHWGSSDSRAGGSEHLVDGQAFPAELHVVHFNSEKYANLSVAKHQPDGLAVLGIFLEVDSVVENPAYNHILDRLDSILYAEQEVTVAPFSVRELLPAHLGHYYRYSGSLTTPPCYQSVLWTVFRQPARISAAQLEKLQKSLYSTKRGKTPSKLLVSNFRVPQSLNQRLVLASFPVGPSDYSAGEVIAIIVAVLLGCLGVFLAGWILAKRTR
SIO_010081: CA14
subclass of: SO_0000673
so part of: CA14
location: join(943879..943936,945847..945867,946121..946300,946493..946638,947230..947325,948061..948130,948885..949042,949207..949333,949521..949541,949952..950040)
location: region:943879-950040:1
so has part: feature:943879-943936:1:exon
so has part: feature:945847-945867:1:exon
so has part: feature:946121-946300:1:exon
so has part: feature:946493-946638:1:exon
so has part: feature:947230-947325:1:exon
so has part: feature:948061-948130:1:exon
so has part: feature:948885-949042:1:exon
so has part: feature:949207-949333:1:exon
so has part: feature:949521-949541:1:exon
so has part: feature:949952-950040:1:exon

XP_032089784.1
type: Protein
SIO_000068: ncbiprotein

position:943879:1
position: 943879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:950040:1
position: 950040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:943879-943936:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:945847-945867:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:946121-946300:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:946493-946638:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:947230-947325:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:948061-948130:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:948885-949042:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:949207-949333:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:949521-949541:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:949952-950040:1:exon

ANP32E
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: ANP32E
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 954502..961818
location: region:954502-961818:1
so has part: feature:954502-961818:1:exon
subclass of: SO_0000010

116519836
type: Gene
SIO_000068: ncbigene

position:954502:1
position: 954502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:961818:1
position: 961818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:954502-961818:1:exon

ANP32E
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: ANP32E
product: acidic nuclear phosphoprotein 32 family member E, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_032233896.1
SIO_010081: ANP32E
subclass of: SO_0000673
so part of: ANP32E
location: join(954502..954907,957357..957506,957722..957844,958511..958682,959103..959263,959976..960027,960419..961818)
location: region:954502-961818:1
so has part: feature:954502-954907:1:exon
so has part: feature:957357-957506:1:exon
so has part: feature:957722-957844:1:exon
so has part: feature:958511-958682:1:exon
so has part: feature:959103-959263:1:exon
so has part: feature:959976-960027:1:exon
so has part: feature:960419-961818:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:954502-954907:1:exon

position:954907:1
position: 954907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:957357-957506:1:exon

position:957357:1
position: 957357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:957506:1
position: 957506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:957722-957844:1:exon

position:957722:1
position: 957722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:957844:1
position: 957844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:958511-958682:1:exon

position:958511:1
position: 958511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:958682:1
position: 958682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:959103-959263:1:exon

position:959103:1
position: 959103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:959263:1
position: 959263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:959976-960027:1:exon

position:959976:1
position: 959976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:960027:1
position: 960027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:960419-961818:1:exon

position:960419:1
position: 960419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ANP32E
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: ANP32E
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acidic leucine-rich nuclear phosphoprotein 32 family member E isoform X1
translation: MEMKKLEMKKRVNLELRNRAPEKVAELVLDNCRSSNGEIEGLNDSFKELEFLSMANTELSSLAKLPTLTKLRRLELSDNLISGGLEVLAERCPNLTYLNLSGNKIKDLSTVETLQNLKNLKSLDLFNCEITNLEDYRENVFELLHQITYLDGFDQDDNEAPDSEEEEDDDDDGDEDEDEDEDKAGPPGEYEENDEDDEASDLGEGEEEEEEEEVGLSYLMKEEIQDEEDDDDYVEERDNEEEDAVVRGEKRKRSPEDEGDDDDD
SIO_010081: ANP32E
subclass of: SO_0000673
so part of: ANP32E
location: join(954839..954907,957357..957506,957722..957844,958511..958682,959103..959263,959976..960027,960419..960486)
location: region:954839-960486:1
so has part: feature:954839-954907:1:exon
so has part: feature:957357-957506:1:exon
so has part: feature:957722-957844:1:exon
so has part: feature:958511-958682:1:exon
so has part: feature:959103-959263:1:exon
so has part: feature:959976-960027:1:exon
so has part: feature:960419-960486:1:exon

XP_032089787.1
type: Protein
SIO_000068: ncbiprotein

position:954839:1
position: 954839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:960486:1
position: 960486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:954839-954907:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:957357-957506:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:957722-957844:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:958511-958682:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:959103-959263:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:959976-960027:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:960419-960486:1:exon

ANP32E
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: ANP32E
product: acidic nuclear phosphoprotein 32 family member E, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_032233897.1
SIO_010081: ANP32E
subclass of: SO_0000673
so part of: ANP32E
location: join(955414..955506,957357..957506,957722..957844,958511..958682,959103..959263,959976..960027,960419..961818)
location: region:955414-961818:1
so has part: feature:955414-955506:1:exon
so has part: feature:957357-957506:1:exon
so has part: feature:957722-957844:1:exon
so has part: feature:958511-958682:1:exon
so has part: feature:959103-959263:1:exon
so has part: feature:959976-960027:1:exon
so has part: feature:960419-961818:1:exon

position:955414:1
position: 955414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:955414-955506:1:exon

position:955506:1
position: 955506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:957357-957506:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:957722-957844:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:958511-958682:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:959103-959263:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:959976-960027:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:960419-961818:1:exon

ANP32E
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: ANP32E
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acidic leucine-rich nuclear phosphoprotein 32 family member E isoform X2
translation: MANTELSSLAKLPTLTKLRRLELSDNLISGGLEVLAERCPNLTYLNLSGNKIKDLSTVETLQNLKNLKSLDLFNCEITNLEDYRENVFELLHQITYLDGFDQDDNEAPDSEEEEDDDDDGDEDEDEDEDKAGPPGEYEENDEDDEASDLGEGEEEEEEEEVGLSYLMKEEIQDEEDDDDYVEERDNEEEDAVVRGEKRKRSPEDEGDDDDD
SIO_010081: ANP32E
subclass of: SO_0000673
so part of: ANP32E
location: join(957447..957506,957722..957844,958511..958682,959103..959263,959976..960027,960419..960486)
location: region:957447-960486:1
so has part: feature:957447-957506:1:exon
so has part: feature:957722-957844:1:exon
so has part: feature:958511-958682:1:exon
so has part: feature:959103-959263:1:exon
so has part: feature:959976-960027:1:exon
so has part: feature:960419-960486:1:exon

XP_032089788.1
type: Protein
SIO_000068: ncbiprotein

position:957447:1
position: 957447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:957447-957506:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:957722-957844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:958511-958682:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:959103-959263:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:959976-960027:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:960419-960486:1:exon

PLEKHO1
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: PLEKHO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(966646..981567)
location: region:966646-981567:-1
so has part: feature:966646-981567:-1:exon
subclass of: SO_0000010

116519823
type: Gene
SIO_000068: ncbigene

position:966646:-1
position: 966646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:981567:-1
position: 981567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:966646-981567:-1:exon

PLEKHO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: PLEKHO1
product: pleckstrin homology domain containing O1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_032233878.1
SIO_010081: PLEKHO1
subclass of: SO_0000673
so part of: PLEKHO1
location: complement(join(966646..972619,973036..973137,974714..974818,975755..975895,978235..978381,979255..981567))
location: region:966646-981567:-1
so has part: feature:979255-981567:-1:exon
so has part: feature:978235-978381:-1:exon
so has part: feature:975755-975895:-1:exon
so has part: feature:974714-974818:-1:exon
so has part: feature:973036-973137:-1:exon
so has part: feature:966646-972619:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:979255-981567:-1:exon

position:979255:-1
position: 979255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:978235-978381:-1:exon

position:978235:-1
position: 978235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:978381:-1
position: 978381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:975755-975895:-1:exon

position:975755:-1
position: 975755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:975895:-1
position: 975895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:974714-974818:-1:exon

position:974714:-1
position: 974714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:974818:-1
position: 974818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:973036-973137:-1:exon

position:973036:-1
position: 973036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:973137:-1
position: 973137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:966646-972619:-1:exon

position:972619:-1
position: 972619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PLEKHO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: PLEKHO1
product: pleckstrin homology domain containing O1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032233877.1
SIO_010081: PLEKHO1
subclass of: SO_0000673
so part of: PLEKHO1
location: complement(join(966646..972619,973036..973137,974714..974818,975755..975895,978235..978381,978594..981567))
location: region:966646-981567:-1
so has part: feature:978594-981567:-1:exon
so has part: feature:978235-978381:-1:exon
so has part: feature:975755-975895:-1:exon
so has part: feature:974714-974818:-1:exon
so has part: feature:973036-973137:-1:exon
so has part: feature:966646-972619:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:978594-981567:-1:exon

position:978594:-1
position: 978594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:978235-978381:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:975755-975895:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:974714-974818:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:973036-973137:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:966646-972619:-1:exon

PLEKHO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: PLEKHO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology domain-containing family O member 1 isoform X2
translation: MMKKTNPAKRGVQEGSQQPLQPEKVGWVRKFCGKGIFREIWKNRFVVLKGDQLYISEKELRDEKNIQEAFDLNDYEKCEELRKSKSRSKKNYSKFSLAHSKEPGNTAPNLVFLAVSPEEKESWINVLNSAIIRAKNRILDEVTVEEESFLAHPTRNRAKIQHSRRPPTRGHLMAVASTSTSDGMLTLDLIQEEEASPEDPCEKSLRVDLDKSAAHFSPGRRRSSDSEDAKDSEKASSLPRRKNLSGEKAPAHREALGRGTMYTPQVPKKLSHLEKNKCASMEEILSCWDSPSAGQPALRTGLKDPAASPEPEQLARIQALVALQLEKTQGLLTEARGYGGEGLRKAQELGSACAPSSPKLDSAATLQEIQRLLGEASSSWSQAQKVLQEVRELRSLYQQLRLSRPAPPQSLLLPQYRKSLM
SIO_010081: PLEKHO1
subclass of: SO_0000673
so part of: PLEKHO1
location: complement(join(971879..972619,973036..973137,974714..974818,975755..975895,978235..978381,979255..979284))
location: region:971879-979284:-1
so has part: feature:979255-979284:-1:exon
so has part: feature:978235-978381:-1:exon
so has part: feature:975755-975895:-1:exon
so has part: feature:974714-974818:-1:exon
so has part: feature:973036-973137:-1:exon
so has part: feature:971879-972619:-1:exon

XP_032089769.1
type: Protein
SIO_000068: ncbiprotein

position:971879:-1
position: 971879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:979284:-1
position: 979284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:979255-979284:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:978235-978381:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:975755-975895:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:974714-974818:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:973036-973137:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:971879-972619:-1:exon

PLEKHO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: PLEKHO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology domain-containing family O member 1 isoform X1
translation: MDSSLPPPIKQVAAAAAAASFRFYLFICLTSFCLLCNCVMAFCFVLNQGTLPGCSACSQPSQGVQEGSQQPLQPEKVGWVRKFCGKGIFREIWKNRFVVLKGDQLYISEKELRDEKNIQEAFDLNDYEKCEELRKSKSRSKKNYSKFSLAHSKEPGNTAPNLVFLAVSPEEKESWINVLNSAIIRAKNRILDEVTVEEESFLAHPTRNRAKIQHSRRPPTRGHLMAVASTSTSDGMLTLDLIQEEEASPEDPCEKSLRVDLDKSAAHFSPGRRRSSDSEDAKDSEKASSLPRRKNLSGEKAPAHREALGRGTMYTPQVPKKLSHLEKNKCASMEEILSCWDSPSAGQPALRTGLKDPAASPEPEQLARIQALVALQLEKTQGLLTEARGYGGEGLRKAQELGSACAPSSPKLDSAATLQEIQRLLGEASSSWSQAQKVLQEVRELRSLYQQLRLSRPAPPQSLLLPQYRKSLM
SIO_010081: PLEKHO1
subclass of: SO_0000673
so part of: PLEKHO1
location: complement(join(971879..972619,973036..973137,974714..974818,975755..975895,978235..978381,978594..978779))
location: region:971879-978779:-1
so has part: feature:978594-978779:-1:exon
so has part: feature:978235-978381:-1:exon
so has part: feature:975755-975895:-1:exon
so has part: feature:974714-974818:-1:exon
so has part: feature:973036-973137:-1:exon
so has part: feature:971879-972619:-1:exon

XP_032089768.1
type: Protein
SIO_000068: ncbiprotein

position:978779:-1
position: 978779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:978594-978779:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:978235-978381:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:975755-975895:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:974714-974818:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:973036-973137:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:971879-972619:-1:exon

VPS45
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: VPS45
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(981667..992451)
location: region:981667-992451:-1
so has part: feature:981667-992451:-1:exon
subclass of: SO_0000010

116519820
type: Gene
SIO_000068: ncbigene

position:981667:-1
position: 981667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:992451:-1
position: 992451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:981667-992451:-1:exon

VPS45
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: VPS45
product: vacuolar protein sorting 45 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_032233870.1
SIO_010081: VPS45
subclass of: SO_0000673
so part of: VPS45
location: complement(join(981667..982114,984613..984744,985761..985882,986408..986515,986647..986805,987745..987912,988132..988245,988757..988891,989051..989161,989294..989431,990120..990188,990380..990459,991521..991581,991927..992061,992257..992451))
location: region:981667-992451:-1
so has part: feature:992257-992451:-1:exon
so has part: feature:991927-992061:-1:exon
so has part: feature:991521-991581:-1:exon
so has part: feature:990380-990459:-1:exon
so has part: feature:990120-990188:-1:exon
so has part: feature:989294-989431:-1:exon
so has part: feature:989051-989161:-1:exon
so has part: feature:988757-988891:-1:exon
so has part: feature:988132-988245:-1:exon
so has part: feature:987745-987912:-1:exon
so has part: feature:986647-986805:-1:exon
so has part: feature:986408-986515:-1:exon
so has part: feature:985761-985882:-1:exon
so has part: feature:984613-984744:-1:exon
so has part: feature:981667-982114:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:992257-992451:-1:exon

position:992257:-1
position: 992257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:991927-992061:-1:exon

position:991927:-1
position: 991927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:992061:-1
position: 992061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:991521-991581:-1:exon

position:991521:-1
position: 991521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:991581:-1
position: 991581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:990380-990459:-1:exon

position:990380:-1
position: 990380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:990459:-1
position: 990459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:990120-990188:-1:exon

position:990120:-1
position: 990120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:990188:-1
position: 990188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:989294-989431:-1:exon

position:989294:-1
position: 989294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:989431:-1
position: 989431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:989051-989161:-1:exon

position:989051:-1
position: 989051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:989161:-1
position: 989161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:988757-988891:-1:exon

position:988757:-1
position: 988757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:988891:-1
position: 988891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:988132-988245:-1:exon

position:988132:-1
position: 988132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:988245:-1
position: 988245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:987745-987912:-1:exon

position:987745:-1
position: 987745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:987912:-1
position: 987912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:986647-986805:-1:exon

position:986647:-1
position: 986647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:986805:-1
position: 986805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:986408-986515:-1:exon

position:986408:-1
position: 986408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:986515:-1
position: 986515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:985761-985882:-1:exon

position:985761:-1
position: 985761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:985882:-1
position: 985882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:984613-984744:-1:exon

position:984613:-1
position: 984613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:984744:-1
position: 984744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:981667-982114:-1:exon

position:982114:-1
position: 982114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VPS45
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: VPS45
product: vacuolar protein sorting 45 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_032233871.1
SIO_010081: VPS45
subclass of: SO_0000673
so part of: VPS45
location: complement(join(981667..982114,984613..984744,985761..985882,986408..986515,986647..986805,987745..987912,988132..988245,988757..988891,989051..989161,989294..989431,990120..990188,990380..990459,991521..991581,991927..992056,992257..992348))
location: region:981667-992348:-1
so has part: feature:992257-992348:-1:exon
so has part: feature:991927-992056:-1:exon
so has part: feature:991521-991581:-1:exon
so has part: feature:990380-990459:-1:exon
so has part: feature:990120-990188:-1:exon
so has part: feature:989294-989431:-1:exon
so has part: feature:989051-989161:-1:exon
so has part: feature:988757-988891:-1:exon
so has part: feature:988132-988245:-1:exon
so has part: feature:987745-987912:-1:exon
so has part: feature:986647-986805:-1:exon
so has part: feature:986408-986515:-1:exon
so has part: feature:985761-985882:-1:exon
so has part: feature:984613-984744:-1:exon
so has part: feature:981667-982114:-1:exon

position:992348:-1
position: 992348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:992257-992348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:991927-992056:-1:exon

position:992056:-1
position: 992056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:991521-991581:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:990380-990459:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:990120-990188:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:989294-989431:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:989051-989161:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:988757-988891:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:988132-988245:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:987745-987912:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:986647-986805:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:986408-986515:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:985761-985882:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:984613-984744:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:981667-982114:-1:exon

VPS45
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: VPS45
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 45 isoform X1
translation: MNVVLAVKQYISRMIGDSGAGMKVLLMDKETTSIVSMVYTQSEILQKEVYLFERIDSANRESMKHLKAICFLRPTKENVEYLIQELRRPKYSSYFIYFSNVISKSDVKSLAEADEQEVVAEVQEFYGDYIAVNPHVFSLNLPACCQGRNWEPAHLCRATQGLTALLLSLKKCPMIRYQLSSDLAKRLAEGVKQVITKEYELFDFRRTEVPPLLLLLDRSDDAITPLLNQWTYQAMVHELLGINNNRIDLSRVPGISKDLREVVLSAENDEFYANNMYLNFAEIGSNIKNLMEDFQRKKPKEQQKLESIADMKAFVENYPQFKKMSGTVSKHVTVVGELSRLVSERNLLEVSEAEQELACQNDHSGALQSIRRLLQNPRVSELDAVRLVMLYALRYERHSSNSLPGLMLDLKNRGVSERLRKLVPAITEYGGKRVQSSELFSSKDAVAITKQFLKGLKGVENVYTQHQPLLHETLDQLIKGKLRDNQYPYLGPNTLRDRPQDIIVFIIGGATYEEALTVYSLNRATPGVRIVLGGTTVHNTRSFLEEVSTAGFRGRGAESSQGMAQAAARRLN
SIO_010081: VPS45
subclass of: SO_0000673
so part of: VPS45
location: complement(join(982021..982114,984613..984744,985761..985882,986408..986515,986647..986805,987745..987912,988132..988245,988757..988891,989051..989161,989294..989431,990120..990188,990380..990459,991521..991581,991927..992061,992257..992349))
location: region:982021-992349:-1
so has part: feature:992257-992349:-1:exon
so has part: feature:991927-992061:-1:exon
so has part: feature:991521-991581:-1:exon
so has part: feature:990380-990459:-1:exon
so has part: feature:990120-990188:-1:exon
so has part: feature:989294-989431:-1:exon
so has part: feature:989051-989161:-1:exon
so has part: feature:988757-988891:-1:exon
so has part: feature:988132-988245:-1:exon
so has part: feature:987745-987912:-1:exon
so has part: feature:986647-986805:-1:exon
so has part: feature:986408-986515:-1:exon
so has part: feature:985761-985882:-1:exon
so has part: feature:984613-984744:-1:exon
so has part: feature:982021-982114:-1:exon

XP_032089761.1
type: Protein
SIO_000068: ncbiprotein

position:982021:-1
position: 982021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:992349:-1
position: 992349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:992257-992349:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:991927-992061:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:991521-991581:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:990380-990459:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:990120-990188:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:989294-989431:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:989051-989161:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:988757-988891:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:988132-988245:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:987745-987912:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:986647-986805:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:986408-986515:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:985761-985882:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:984613-984744:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:982021-982114:-1:exon

VPS45
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: VPS45
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 45 isoform X2
translation: MVYTQSEILQKEVYLFERIDSANRESMKHLKAICFLRPTKENVEYLIQELRRPKYSSYFIYFSNVISKSDVKSLAEADEQEVVAEVQEFYGDYIAVNPHVFSLNLPACCQGRNWEPAHLCRATQGLTALLLSLKKCPMIRYQLSSDLAKRLAEGVKQVITKEYELFDFRRTEVPPLLLLLDRSDDAITPLLNQWTYQAMVHELLGINNNRIDLSRVPGISKDLREVVLSAENDEFYANNMYLNFAEIGSNIKNLMEDFQRKKPKEQQKLESIADMKAFVENYPQFKKMSGTVSKHVTVVGELSRLVSERNLLEVSEAEQELACQNDHSGALQSIRRLLQNPRVSELDAVRLVMLYALRYERHSSNSLPGLMLDLKNRGVSERLRKLVPAITEYGGKRVQSSELFSSKDAVAITKQFLKGLKGVENVYTQHQPLLHETLDQLIKGKLRDNQYPYLGPNTLRDRPQDIIVFIIGGATYEEALTVYSLNRATPGVRIVLGGTTVHNTRSFLEEVSTAGFRGRGAESSQGMAQAAARRLN
SIO_010081: VPS45
subclass of: SO_0000673
so part of: VPS45
location: complement(join(982021..982114,984613..984744,985761..985882,986408..986515,986647..986805,987745..987912,988132..988245,988757..988891,989051..989161,989294..989431,990120..990188,990380..990459,991521..991581,991927..992046))
location: region:982021-992046:-1
so has part: feature:991927-992046:-1:exon
so has part: feature:991521-991581:-1:exon
so has part: feature:990380-990459:-1:exon
so has part: feature:990120-990188:-1:exon
so has part: feature:989294-989431:-1:exon
so has part: feature:989051-989161:-1:exon
so has part: feature:988757-988891:-1:exon
so has part: feature:988132-988245:-1:exon
so has part: feature:987745-987912:-1:exon
so has part: feature:986647-986805:-1:exon
so has part: feature:986408-986515:-1:exon
so has part: feature:985761-985882:-1:exon
so has part: feature:984613-984744:-1:exon
so has part: feature:982021-982114:-1:exon

XP_032089762.1
type: Protein
SIO_000068: ncbiprotein

position:992046:-1
position: 992046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:991927-992046:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:991521-991581:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:990380-990459:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:990120-990188:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:989294-989431:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:989051-989161:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:988757-988891:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:988132-988245:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:987745-987912:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:986647-986805:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:986408-986515:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:985761-985882:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:984613-984744:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:982021-982114:-1:exon

OTUD7B
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: OTUD7B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 996780..1018704
location: region:996780-1018704:1
so has part: feature:996780-1018704:1:exon
subclass of: SO_0000010

116519811
type: Gene
SIO_000068: ncbigene

position:996780:1
position: 996780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1018704:1
position: 1018704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:996780-1018704:1:exon

OTUD7B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: OTUD7B
product: OTU deubiquitinase 7B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_032233857.1
SIO_010081: OTUD7B
subclass of: SO_0000673
so part of: OTUD7B
location: join(996780..996976,1004207..1004348,1005053..1005223,1005410..1005658,1007391..1007492,1007887..1008014,1008288..1008400,1008777..1008904,1011934..1012083,1012314..1012428,1013039..1013123,1013788..1018704)
location: region:996780-1018704:1
so has part: feature:996780-996976:1:exon
so has part: feature:1004207-1004348:1:exon
so has part: feature:1005053-1005223:1:exon
so has part: feature:1005410-1005658:1:exon
so has part: feature:1007391-1007492:1:exon
so has part: feature:1007887-1008014:1:exon
so has part: feature:1008288-1008400:1:exon
so has part: feature:1008777-1008904:1:exon
so has part: feature:1011934-1012083:1:exon
so has part: feature:1012314-1012428:1:exon
so has part: feature:1013039-1013123:1:exon
so has part: feature:1013788-1018704:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:996780-996976:1:exon

position:996976:1
position: 996976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1004207-1004348:1:exon

position:1004207:1
position: 1004207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1004348:1
position: 1004348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1005053-1005223:1:exon

position:1005053:1
position: 1005053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1005223:1
position: 1005223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1005410-1005658:1:exon

position:1005410:1
position: 1005410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1005658:1
position: 1005658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1007391-1007492:1:exon

position:1007391:1
position: 1007391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1007492:1
position: 1007492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1007887-1008014:1:exon

position:1007887:1
position: 1007887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1008014:1
position: 1008014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1008288-1008400:1:exon

position:1008288:1
position: 1008288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1008400:1
position: 1008400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1008777-1008904:1:exon

position:1008777:1
position: 1008777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1008904:1
position: 1008904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1011934-1012083:1:exon

position:1011934:1
position: 1011934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1012083:1
position: 1012083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1012314-1012428:1:exon

position:1012314:1
position: 1012314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1012428:1
position: 1012428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1013039-1013123:1:exon

position:1013039:1
position: 1013039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1013123:1
position: 1013123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1013788-1018704:1:exon

position:1013788:1
position: 1013788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OTUD7B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: OTUD7B
product: OTU deubiquitinase 7B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_032233858.1
SIO_010081: OTUD7B
subclass of: SO_0000673
so part of: OTUD7B
location: join(996780..996976,1004207..1004348,1005053..1005223,1005410..1005658,1007391..1007492,1007887..1008014,1008288..1008400,1008777..1008904,1011934..1012083,1012332..1012428,1013039..1013123,1013788..1018704)
location: region:996780-1018704:1
so has part: feature:996780-996976:1:exon
so has part: feature:1004207-1004348:1:exon
so has part: feature:1005053-1005223:1:exon
so has part: feature:1005410-1005658:1:exon
so has part: feature:1007391-1007492:1:exon
so has part: feature:1007887-1008014:1:exon
so has part: feature:1008288-1008400:1:exon
so has part: feature:1008777-1008904:1:exon
so has part: feature:1011934-1012083:1:exon
so has part: feature:1012332-1012428:1:exon
so has part: feature:1013039-1013123:1:exon
so has part: feature:1013788-1018704:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:996780-996976:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1004207-1004348:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1005053-1005223:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1005410-1005658:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1007391-1007492:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1007887-1008014:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1008288-1008400:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1008777-1008904:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1011934-1012083:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1012332-1012428:1:exon

position:1012332:1
position: 1012332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1013039-1013123:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1013788-1018704:1:exon

OTUD7B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: OTUD7B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: OTU domain-containing protein 7B isoform X1
translation: MTLDMDVVLSDFVRSTGAEPGLARDLLEGKNWDLNAALNDFEQLRQVHAGVLPRSFNDGRTFKFVEKEIARSVRPQLQRQDDIIQEKRLSRGISHASSTIVSLARSHVSSNGGSGGGGGGGGGGSEHLLEMPICTFQLPDLNAYSEDFRNFIERDLIEQSMLVALEQAGRLNWWANVDPSCQRLLPLATTGDGNCLLHAASLGMWGFHDRDLMLRKCLYALMDRGAEREALKRRWRWQQTQQNKESGLVYTEEEWQKEWNELIKLASSEPRMHYGTSSGNCGGVEGSEEPVYESLEEFHVFVLSHVLKRPIVVVADTMLRDSGGEAFAPIPFGGIYLPLEVPASKCHRSPLVLAYDQAHFSALVSMEQKEPIKEQAVIPLTDSEHKLLPVHFAVDPGKDWEWGKDDNDNVKLASVTLSLEAKLHLLHSYMNVKWIPLSCEMQAPLAQPESPTASAGDEIRSAADSGDSDKESVCSSSASNSGSSKASSKEKEKEKPKKEREKDKEKKRADSVANKLGSFGKTLGSKLKKNMGGLMHSRAVKGGITNGQGETLEKKKKGSIKIRKGSKEEAPSGDFLGLPEKSGPAKTSSEKQPDNYKYSSDVKLSLSILRATMQGERKFIFASQLKTSHRHQYQEEMIQRYLLDAEERYSAEQKQKEAEKKMVALGNGGAAKKMDLEGNPLKGEETLLNSMDHPGLSPYSLQSSDLATVGTKMSSFPTGHSGVFTIPRPSPMSNVESTYPPTYQDGRRQVAGGLCAPFPSYATLPRQCPQSRSHLSQQVGHFCATEMDMPPSYAEVDCEGSSCPVLSSNGYQECTEPDGSSPKVVQGDRSKAWLLYSVQQTKCKQPNCSFYGHPETGNFCSCCYKEELRRKEQEKETLIHRF
SIO_010081: OTUD7B
subclass of: SO_0000673
so part of: OTUD7B
location: join(1004264..1004348,1005053..1005223,1005410..1005658,1007391..1007492,1007887..1008014,1008288..1008400,1008777..1008904,1011934..1012083,1012314..1012428,1013039..1013123,1013788..1015110)
location: region:1004264-1015110:1
so has part: feature:1004264-1004348:1:exon
so has part: feature:1005053-1005223:1:exon
so has part: feature:1005410-1005658:1:exon
so has part: feature:1007391-1007492:1:exon
so has part: feature:1007887-1008014:1:exon
so has part: feature:1008288-1008400:1:exon
so has part: feature:1008777-1008904:1:exon
so has part: feature:1011934-1012083:1:exon
so has part: feature:1012314-1012428:1:exon
so has part: feature:1013039-1013123:1:exon
so has part: feature:1013788-1015110:1:exon

XP_032089748.1
type: Protein
SIO_000068: ncbiprotein

position:1004264:1
position: 1004264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1015110:1
position: 1015110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1004264-1004348:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1005053-1005223:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1005410-1005658:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1007391-1007492:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1007887-1008014:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1008288-1008400:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1008777-1008904:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1011934-1012083:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1012314-1012428:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1013039-1013123:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1013788-1015110:1:exon

OTUD7B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: OTUD7B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: OTU domain-containing protein 7B isoform X2
translation: MTLDMDVVLSDFVRSTGAEPGLARDLLEGKNWDLNAALNDFEQLRQVHAGVLPRSFNDGRTFKFVEKEIARSVRPQLQRQDDIIQEKRLSRGISHASSTIVSLARSHVSSNGGSGGGGGGGGGGSEHLLEMPICTFQLPDLNAYSEDFRNFIERDLIEQSMLVALEQAGRLNWWANVDPSCQRLLPLATTGDGNCLLHAASLGMWGFHDRDLMLRKCLYALMDRGAEREALKRRWRWQQTQQNKESGLVYTEEEWQKEWNELIKLASSEPRMHYGTSSGNCGGVEGSEEPVYESLEEFHVFVLSHVLKRPIVVVADTMLRDSGGEAFAPIPFGGIYLPLEVPASKCHRSPLVLAYDQAHFSALVSMEQKEPIKEQDSEHKLLPVHFAVDPGKDWEWGKDDNDNVKLASVTLSLEAKLHLLHSYMNVKWIPLSCEMQAPLAQPESPTASAGDEIRSAADSGDSDKESVCSSSASNSGSSKASSKEKEKEKPKKEREKDKEKKRADSVANKLGSFGKTLGSKLKKNMGGLMHSRAVKGGITNGQGETLEKKKKGSIKIRKGSKEEAPSGDFLGLPEKSGPAKTSSEKQPDNYKYSSDVKLSLSILRATMQGERKFIFASQLKTSHRHQYQEEMIQRYLLDAEERYSAEQKQKEAEKKMVALGNGGAAKKMDLEGNPLKGEETLLNSMDHPGLSPYSLQSSDLATVGTKMSSFPTGHSGVFTIPRPSPMSNVESTYPPTYQDGRRQVAGGLCAPFPSYATLPRQCPQSRSHLSQQVGHFCATEMDMPPSYAEVDCEGSSCPVLSSNGYQECTEPDGSSPKVVQGDRSKAWLLYSVQQTKCKQPNCSFYGHPETGNFCSCCYKEELRRKEQEKETLIHRF
SIO_010081: OTUD7B
subclass of: SO_0000673
so part of: OTUD7B
location: join(1004264..1004348,1005053..1005223,1005410..1005658,1007391..1007492,1007887..1008014,1008288..1008400,1008777..1008904,1011934..1012083,1012332..1012428,1013039..1013123,1013788..1015110)
location: region:1004264-1015110:1
so has part: feature:1004264-1004348:1:exon
so has part: feature:1005053-1005223:1:exon
so has part: feature:1005410-1005658:1:exon
so has part: feature:1007391-1007492:1:exon
so has part: feature:1007887-1008014:1:exon
so has part: feature:1008288-1008400:1:exon
so has part: feature:1008777-1008904:1:exon
so has part: feature:1011934-1012083:1:exon
so has part: feature:1012332-1012428:1:exon
so has part: feature:1013039-1013123:1:exon
so has part: feature:1013788-1015110:1:exon

XP_032089749.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1004264-1004348:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1005053-1005223:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1005410-1005658:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1007391-1007492:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1007887-1008014:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1008288-1008400:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1008777-1008904:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1011934-1012083:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1012332-1012428:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1013039-1013123:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1013788-1015110:1:exon

MTMR11
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: MTMR11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1023316..1035669
location: region:1023316-1035669:1
so has part: feature:1023316-1035669:1:exon
subclass of: SO_0000010

116519813
type: Gene
SIO_000068: ncbigene

position:1023316:1
position: 1023316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1035669:1
position: 1035669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1023316-1035669:1:exon

MTMR11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: MTMR11
product: myotubularin related protein 11, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_032233861.1
SIO_010081: MTMR11
subclass of: SO_0000673
so part of: MTMR11
location: join(1023316..1023927,1025542..1025614,1025967..1026103,1026458..1026530,1026929..1027071,1027453..1027531,1027731..1027887,1028448..1028535,1029048..1029136,1029477..1029607,1030573..1030645,1031471..1031541,1032129..1032301,1032844..1033014,1033149..1033400,1033492..1033773,1034820..1035669)
location: region:1023316-1035669:1
so has part: feature:1023316-1023927:1:exon
so has part: feature:1025542-1025614:1:exon
so has part: feature:1025967-1026103:1:exon
so has part: feature:1026458-1026530:1:exon
so has part: feature:1026929-1027071:1:exon
so has part: feature:1027453-1027531:1:exon
so has part: feature:1027731-1027887:1:exon
so has part: feature:1028448-1028535:1:exon
so has part: feature:1029048-1029136:1:exon
so has part: feature:1029477-1029607:1:exon
so has part: feature:1030573-1030645:1:exon
so has part: feature:1031471-1031541:1:exon
so has part: feature:1032129-1032301:1:exon
so has part: feature:1032844-1033014:1:exon
so has part: feature:1033149-1033400:1:exon
so has part: feature:1033492-1033773:1:exon
so has part: feature:1034820-1035669:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1023316-1023927:1:exon

position:1023927:1
position: 1023927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1025542-1025614:1:exon

position:1025542:1
position: 1025542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1025614:1
position: 1025614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1025967-1026103:1:exon

position:1025967:1
position: 1025967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1026103:1
position: 1026103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1026458-1026530:1:exon

position:1026458:1
position: 1026458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1026530:1
position: 1026530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1026929-1027071:1:exon

position:1026929:1
position: 1026929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1027071:1
position: 1027071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1027453-1027531:1:exon

position:1027453:1
position: 1027453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1027531:1
position: 1027531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1027731-1027887:1:exon

position:1027731:1
position: 1027731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1027887:1
position: 1027887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1028448-1028535:1:exon

position:1028448:1
position: 1028448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1028535:1
position: 1028535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1029048-1029136:1:exon

position:1029048:1
position: 1029048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1029136:1
position: 1029136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1029477-1029607:1:exon

position:1029477:1
position: 1029477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1029607:1
position: 1029607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1030573-1030645:1:exon

position:1030573:1
position: 1030573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1030645:1
position: 1030645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1031471-1031541:1:exon

position:1031471:1
position: 1031471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1031541:1
position: 1031541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1032129-1032301:1:exon

position:1032129:1
position: 1032129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1032301:1
position: 1032301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1032844-1033014:1:exon

position:1032844:1
position: 1032844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1033014:1
position: 1033014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1033149-1033400:1:exon

position:1033149:1
position: 1033149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1033400:1
position: 1033400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1033492-1033773:1:exon

position:1033492:1
position: 1033492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1033773:1
position: 1033773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1034820-1035669:1:exon

position:1034820:1
position: 1034820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MTMR11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: MTMR11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 11 isoform X1
translation: MLSMSKNSFKIKHPLPGTGPRNPKSPHMNRKRNGNCHTLQCIAGEYIQEAAGHVKKSSSSQDGEGRIRGTLYCTNLRVAFLPDSSPNNENDPCCLFMCSDYEVALPCIGKLVAVNSFTKAKVLTSTSTLKFIPEELIIYCRDFRVLRFQFHENGLEPQAFQVTMAIAQAQENSGRDTCYEYLTLKNLENSCLARQDIQLQEEFSVVLFETLCDWEKELKRLGAAGWRVSPVNERFDMSTSLPKYLWVPSRFLDNELKRTFVHFNERRIPRLCWHHPRGSDLLRAANFHTNSDPEKEDIRAIETLLFAGHSQCVIVEATADLPSLPEIHQSYSKLWNLSLCLTDTSVAPSDEKWLSSLENTRWLDHVRLCLKKASEVTLLLTERSRSIVLQESDDRDLNCLLASLVQVLSDPYTRTIHGFQSLIQKEWVAAGHPFLRRLNVLQKNDQDESPVFFLFLDSIWQLLQQFPRSFEFTEAYLMAMYDSCFIPFSSTFLFNCQWERSRKNQNHFLNQIYTPINGWQENLCLEILQKGGYPVKNVGHTNLSTVWNWLLRSNPWQIAQFRNPWYNENNFSNGGTTLNKKFLFTNGDRMENTSSEKWTLYIFSKGSLSLQTHIFPWKNGTLSKKSFHRVQALETSREQERSWKAKSNDSFIYHNNLLLLPSHSGTSIRLWKRCYLRGNPEVQVGLFASNIVKLTEELDLLQKQLTYLQARGSYSTALENA
SIO_010081: MTMR11
subclass of: SO_0000673
so part of: MTMR11
location: join(1023871..1023927,1025542..1025614,1025967..1026103,1026458..1026530,1026929..1027071,1027453..1027531,1027731..1027887,1028448..1028535,1029048..1029136,1029477..1029607,1030573..1030645,1031471..1031541,1032129..1032301,1032844..1033014,1033149..1033400,1033492..1033773,1034820..1034936)
location: region:1023871-1034936:1
so has part: feature:1023871-1023927:1:exon
so has part: feature:1025542-1025614:1:exon
so has part: feature:1025967-1026103:1:exon
so has part: feature:1026458-1026530:1:exon
so has part: feature:1026929-1027071:1:exon
so has part: feature:1027453-1027531:1:exon
so has part: feature:1027731-1027887:1:exon
so has part: feature:1028448-1028535:1:exon
so has part: feature:1029048-1029136:1:exon
so has part: feature:1029477-1029607:1:exon
so has part: feature:1030573-1030645:1:exon
so has part: feature:1031471-1031541:1:exon
so has part: feature:1032129-1032301:1:exon
so has part: feature:1032844-1033014:1:exon
so has part: feature:1033149-1033400:1:exon
so has part: feature:1033492-1033773:1:exon
so has part: feature:1034820-1034936:1:exon

XP_032089752.1
type: Protein
SIO_000068: ncbiprotein

position:1023871:1
position: 1023871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1034936:1
position: 1034936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1023871-1023927:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1025542-1025614:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1025967-1026103:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1026458-1026530:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1026929-1027071:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1027453-1027531:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1027731-1027887:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1028448-1028535:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1029048-1029136:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1029477-1029607:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1030573-1030645:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1031471-1031541:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1032129-1032301:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1032844-1033014:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1033149-1033400:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1033492-1033773:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1034820-1034936:1:exon

MTMR11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: MTMR11
product: myotubularin related protein 11, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_032233862.1
SIO_010081: MTMR11
subclass of: SO_0000673
so part of: MTMR11
location: join(1023934..1025244,1025542..1025614,1025967..1026103,1026458..1026530,1026929..1027071,1027453..1027531,1027731..1027887,1028448..1028535,1029048..1029136,1029477..1029607,1030573..1030645,1031471..1031541,1032129..1032301,1032844..1033014,1033149..1033400,1033492..1033773,1034820..1035669)
location: region:1023934-1035669:1
so has part: feature:1023934-1025244:1:exon
so has part: feature:1025542-1025614:1:exon
so has part: feature:1025967-1026103:1:exon
so has part: feature:1026458-1026530:1:exon
so has part: feature:1026929-1027071:1:exon
so has part: feature:1027453-1027531:1:exon
so has part: feature:1027731-1027887:1:exon
so has part: feature:1028448-1028535:1:exon
so has part: feature:1029048-1029136:1:exon
so has part: feature:1029477-1029607:1:exon
so has part: feature:1030573-1030645:1:exon
so has part: feature:1031471-1031541:1:exon
so has part: feature:1032129-1032301:1:exon
so has part: feature:1032844-1033014:1:exon
so has part: feature:1033149-1033400:1:exon
so has part: feature:1033492-1033773:1:exon
so has part: feature:1034820-1035669:1:exon

position:1023934:1
position: 1023934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1023934-1025244:1:exon

position:1025244:1
position: 1025244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1025542-1025614:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1025967-1026103:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1026458-1026530:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1026929-1027071:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1027453-1027531:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1027731-1027887:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1028448-1028535:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1029048-1029136:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1029477-1029607:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1030573-1030645:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1031471-1031541:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1032129-1032301:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1032844-1033014:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1033149-1033400:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1033492-1033773:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1034820-1035669:1:exon

MTMR11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: MTMR11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 11 isoform X2
translation: MNRKRNGNCHTLQCIAGEYIQEAAGHVKKSSSSQDGEGRIRGTLYCTNLRVAFLPDSSPNNENDPCCLFMCSDYEVALPCIGKLVAVNSFTKAKVLTSTSTLKFIPEELIIYCRDFRVLRFQFHENGLEPQAFQVTMAIAQAQENSGRDTCYEYLTLKNLENSCLARQDIQLQEEFSVVLFETLCDWEKELKRLGAAGWRVSPVNERFDMSTSLPKYLWVPSRFLDNELKRTFVHFNERRIPRLCWHHPRGSDLLRAANFHTNSDPEKEDIRAIETLLFAGHSQCVIVEATADLPSLPEIHQSYSKLWNLSLCLTDTSVAPSDEKWLSSLENTRWLDHVRLCLKKASEVTLLLTERSRSIVLQESDDRDLNCLLASLVQVLSDPYTRTIHGFQSLIQKEWVAAGHPFLRRLNVLQKNDQDESPVFFLFLDSIWQLLQQFPRSFEFTEAYLMAMYDSCFIPFSSTFLFNCQWERSRKNQNHFLNQIYTPINGWQENLCLEILQKGGYPVKNVGHTNLSTVWNWLLRSNPWQIAQFRNPWYNENNFSNGGTTLNKKFLFTNGDRMENTSSEKWTLYIFSKGSLSLQTHIFPWKNGTLSKKSFHRVQALETSREQERSWKAKSNDSFIYHNNLLLLPSHSGTSIRLWKRCYLRGNPEVQVGLFASNIVKLTEELDLLQKQLTYLQARGSYSTALENA
SIO_010081: MTMR11
subclass of: SO_0000673
so part of: MTMR11
location: join(1025566..1025614,1025967..1026103,1026458..1026530,1026929..1027071,1027453..1027531,1027731..1027887,1028448..1028535,1029048..1029136,1029477..1029607,1030573..1030645,1031471..1031541,1032129..1032301,1032844..1033014,1033149..1033400,1033492..1033773,1034820..1034936)
location: region:1025566-1034936:1
so has part: feature:1025566-1025614:1:exon
so has part: feature:1025967-1026103:1:exon
so has part: feature:1026458-1026530:1:exon
so has part: feature:1026929-1027071:1:exon
so has part: feature:1027453-1027531:1:exon
so has part: feature:1027731-1027887:1:exon
so has part: feature:1028448-1028535:1:exon
so has part: feature:1029048-1029136:1:exon
so has part: feature:1029477-1029607:1:exon
so has part: feature:1030573-1030645:1:exon
so has part: feature:1031471-1031541:1:exon
so has part: feature:1032129-1032301:1:exon
so has part: feature:1032844-1033014:1:exon
so has part: feature:1033149-1033400:1:exon
so has part: feature:1033492-1033773:1:exon
so has part: feature:1034820-1034936:1:exon

XP_032089753.1
type: Protein
SIO_000068: ncbiprotein

position:1025566:1
position: 1025566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1025566-1025614:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1025967-1026103:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1026458-1026530:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1026929-1027071:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1027453-1027531:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1027731-1027887:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1028448-1028535:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1029048-1029136:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1029477-1029607:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1030573-1030645:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1031471-1031541:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1032129-1032301:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1032844-1033014:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1033149-1033400:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1033492-1033773:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1034820-1034936:1:exon

SF3B4
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: SF3B4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1036781..1039529
location: region:1036781-1039529:1
so has part: feature:1036781-1039529:1:exon
subclass of: SO_0000010

116519827
type: Gene
SIO_000068: ncbigene

position:1036781:1
position: 1036781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1039529:1
position: 1039529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1036781-1039529:1:exon

SF3B4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: SF3B4
product: splicing factor 3b subunit 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_032233883.1
SIO_010081: SF3B4
subclass of: SO_0000673
so part of: SF3B4
location: join(1036781..1037098,1037261..1037389,1037518..1038060,1038224..1038415,1038613..1038783,1039056..1039529)
location: region:1036781-1039529:1
so has part: feature:1036781-1037098:1:exon
so has part: feature:1037261-1037389:1:exon
so has part: feature:1037518-1038060:1:exon
so has part: feature:1038224-1038415:1:exon
so has part: feature:1038613-1038783:1:exon
so has part: feature:1039056-1039529:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1036781-1037098:1:exon

position:1037098:1
position: 1037098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1037261-1037389:1:exon

position:1037261:1
position: 1037261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1037389:1
position: 1037389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1037518-1038060:1:exon

position:1037518:1
position: 1037518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1038060:1
position: 1038060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1038224-1038415:1:exon

position:1038224:1
position: 1038224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1038415:1
position: 1038415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1038613-1038783:1:exon

position:1038613:1
position: 1038613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1038783:1
position: 1038783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1039056-1039529:1:exon

position:1039056:1
position: 1039056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SF3B4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: SF3B4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: splicing factor 3B subunit 4
translation: MAAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSVPTPVVTTLGPGVTPPGIPPPGSFPPPVPPPGALPPGLPPSMPPPPMPPGAGAPGPPSAGAPGGAHPPHPHPFPPGGMHPGMPQMQVHHGMPGMGPHHPGPPGAGGQPPPRPPPGMPHPGPPPMGMPPRGPHFGSPMGHPGPMPPHGMRGPPPLMPPHGYNGPPRPPPYSYQRIPLPPRPAQRPMVPPRGPMRGPLPP
SIO_010081: SF3B4
subclass of: SO_0000673
so part of: SF3B4
location: join(1037065..1037098,1037261..1037389,1037518..1038060,1038224..1038415,1038613..1038783,1039056..1039240)
location: region:1037065-1039240:1
so has part: feature:1037065-1037098:1:exon
so has part: feature:1037261-1037389:1:exon
so has part: feature:1037518-1038060:1:exon
so has part: feature:1038224-1038415:1:exon
so has part: feature:1038613-1038783:1:exon
so has part: feature:1039056-1039240:1:exon

XP_032089774.1
type: Protein
SIO_000068: ncbiprotein

position:1037065:1
position: 1037065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1039240:1
position: 1039240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1037065-1037098:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1037261-1037389:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1037518-1038060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1038224-1038415:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1038613-1038783:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1039056-1039240:1:exon

SV2A
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: SV2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1045942..1054510
location: region:1045942-1054510:1
so has part: feature:1045942-1054510:1:exon
subclass of: SO_0000010

116519814
type: Gene
SIO_000068: ncbigene

position:1045942:1
position: 1045942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1054510:1
position: 1054510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1045942-1054510:1:exon

SV2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: SV2A
product: synaptic vesicle glycoprotein 2A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032233863.1
SIO_010081: SV2A
subclass of: SO_0000673
so part of: SV2A
location: join(1045942..1046527,1048992..1049172,1049396..1049547,1049945..1050078,1050277..1050366,1050482..1050592,1050844..1050932,1051676..1051840,1052113..1052246,1052693..1052896,1053244..1053403,1053733..1054510)
location: region:1045942-1054510:1
so has part: feature:1045942-1046527:1:exon
so has part: feature:1048992-1049172:1:exon
so has part: feature:1049396-1049547:1:exon
so has part: feature:1049945-1050078:1:exon
so has part: feature:1050277-1050366:1:exon
so has part: feature:1050482-1050592:1:exon
so has part: feature:1050844-1050932:1:exon
so has part: feature:1051676-1051840:1:exon
so has part: feature:1052113-1052246:1:exon
so has part: feature:1052693-1052896:1:exon
so has part: feature:1053244-1053403:1:exon
so has part: feature:1053733-1054510:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1045942-1046527:1:exon

position:1046527:1
position: 1046527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1048992-1049172:1:exon

position:1048992:1
position: 1048992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1049172:1
position: 1049172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1049396-1049547:1:exon

position:1049396:1
position: 1049396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1049547:1
position: 1049547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1049945-1050078:1:exon

position:1049945:1
position: 1049945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1050078:1
position: 1050078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1050277-1050366:1:exon

position:1050277:1
position: 1050277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1050366:1
position: 1050366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1050482-1050592:1:exon

position:1050482:1
position: 1050482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1050592:1
position: 1050592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1050844-1050932:1:exon

position:1050844:1
position: 1050844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1050932:1
position: 1050932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1051676-1051840:1:exon

position:1051676:1
position: 1051676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1051840:1
position: 1051840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1052113-1052246:1:exon

position:1052113:1
position: 1052113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1052246:1
position: 1052246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1052693-1052896:1:exon

position:1052693:1
position: 1052693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1052896:1
position: 1052896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1053244-1053403:1:exon

position:1053244:1
position: 1053244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1053403:1
position: 1053403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1053733-1054510:1:exon

position:1053733:1
position: 1053733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SV2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: SV2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptic vesicle glycoprotein 2A
translation: MDEGFRDRTAFIRGAKDIAKEVKKHTTKKVGKGVDRVQDEYTKRSYARFEEEDDDDYQPQDGYYRGEPSVDDEGASSDATEGHDEDDEIYEGEYQGIPRNDSLKGGERLAAGPEVASEFRDFDDLEGDKKKEKEELSQQYELILQECGHGKFQWTLYFVLGLALMADGVEIFVVGFVLPSAEKDMCLSDSNKGMLGLIVYLGMMVGAFLWGGLADRLGRRQCLLMSLSVNSVFAFFSSFVQGYGTFLFCRLLSGVGIGGSIPIVFSYYSEFLAQEKRGEHLSWLCMFWMIGGIYASAMAWAIIPHYGWSFQMGSAYQFHSWRVFVLVCAFPSVFAIGALTSMPESPRFFLENGKHDEAWMVLKQVHDTNMRAKGHPERVFSVTHIKTIKQEDELVEIQSDTGTWYRRWMVRFLNLSQQVWANFHQCFAPEYRRVTLMMMAVWFTMSFSYYGLTVWFPDMIKHLQNVEYASRTKVFNNETFRHITFNFTLENQIHRRGEYFNDKFIGLKMKSVSFIDSLFEECYFEDVTSSNTFFKNCTFLATVFYNTDLFEYKFIDSRIVNSTFLHNKEGCQLDFSDDNNAYMIYFVSFLGTLAVLPGNIVSALLMDKIGRLRMLAGSSVMSCVSCFFLSFGNSESAMIALLCLFGGVSIASWNALDVLTVELYPSDRRTTAFGFLNALCKLAAVLGISIFTSFVGITKAVPILLASAALAVGSSLALKLPETRGQVLQ
SIO_010081: SV2A
subclass of: SO_0000673
so part of: SV2A
location: join(1045942..1046527,1048992..1049172,1049396..1049547,1049945..1050078,1050277..1050366,1050482..1050592,1050844..1050932,1051676..1051840,1052113..1052246,1052693..1052896,1053244..1053403,1053733..1053916)
location: region:1045942-1053916:1
so has part: feature:1045942-1046527:1:exon
so has part: feature:1048992-1049172:1:exon
so has part: feature:1049396-1049547:1:exon
so has part: feature:1049945-1050078:1:exon
so has part: feature:1050277-1050366:1:exon
so has part: feature:1050482-1050592:1:exon
so has part: feature:1050844-1050932:1:exon
so has part: feature:1051676-1051840:1:exon
so has part: feature:1052113-1052246:1:exon
so has part: feature:1052693-1052896:1:exon
so has part: feature:1053244-1053403:1:exon
so has part: feature:1053733-1053916:1:exon

XP_032089754.1
type: Protein
SIO_000068: ncbiprotein

position:1053916:1
position: 1053916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1045942-1046527:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1048992-1049172:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1049396-1049547:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1049945-1050078:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1050277-1050366:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1050482-1050592:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1050844-1050932:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1051676-1051840:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1052113-1052246:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1052693-1052896:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1053244-1053403:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1053733-1053916:1:exon

BOLA1
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: BOLA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1056306..1057686)
location: region:1056306-1057686:-1
so has part: feature:1056306-1057686:-1:exon
subclass of: SO_0000010

116519839
type: Gene
SIO_000068: ncbigene

position:1056306:-1
position: 1056306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1057686:-1
position: 1057686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1056306-1057686:-1:exon

BOLA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: BOLA1
product: bolA family member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_032233901.1
SIO_010081: BOLA1
subclass of: SO_0000673
so part of: BOLA1
location: complement(join(1056306..1056944,1057575..1057686))
location: region:1056306-1057686:-1
so has part: feature:1057575-1057686:-1:exon
so has part: feature:1056306-1056944:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1057575-1057686:-1:exon

position:1057575:-1
position: 1057575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1056306-1056944:-1:exon

position:1056944:-1
position: 1056944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BOLA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: BOLA1
product: bolA family member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_032233900.1
SIO_010081: BOLA1
subclass of: SO_0000673
so part of: BOLA1
location: complement(join(1056306..1056944,1057083..1057192))
location: region:1056306-1057192:-1
so has part: feature:1057083-1057192:-1:exon
so has part: feature:1056306-1056944:-1:exon

position:1057192:-1
position: 1057192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1057083-1057192:-1:exon

position:1057083:-1
position: 1057083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1056306-1056944:-1:exon

BOLA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: BOLA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bolA-like protein 1
translation: MLPSSLPALLGRALRSPAFSAGRAALSGAALEKPVESGIRAKLQAALEPLHLEVINDSHMHAVPRGSETHFRVVVASRRFEGLPLIHRHRLVNDLLQEELAGPVHSLSIQAKTPQQWEKGAKASQSPQCLGGAKHDPQVAAKLGKPTVEG
SIO_010081: BOLA1
subclass of: SO_0000673
so part of: BOLA1
location: complement(1056472..1056924)
location: region:1056472-1056924:-1
so has part: feature:1056472-1056924:-1:exon

XP_032089791.1
type: Protein
SIO_000068: ncbiprotein

position:1056472:-1
position: 1056472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1056924:-1
position: 1056924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1056472-1056924:-1:exon

BOLA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: BOLA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bolA-like protein 1
translation: MLPSSLPALLGRALRSPAFSAGRAALSGAALEKPVESGIRAKLQAALEPLHLEVINDSHMHAVPRGSETHFRVVVASRRFEGLPLIHRHRLVNDLLQEELAGPVHSLSIQAKTPQQWEKGAKASQSPQCLGGAKHDPQVAAKLGKPTVEG
SIO_010081: BOLA1
subclass of: SO_0000673
so part of: BOLA1
location: complement(1056472..1056924)
location: region:1056472-1056924:-1
so has part: feature:1056472-1056924:-1:exon

XP_032089792.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1056472-1056924:-1:exon

LOC116519815
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: LOC116519815
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1059114..1061247)
location: region:1059114-1061247:-1
so has part: feature:1059114-1061247:-1:exon
subclass of: SO_0000010

116519815
type: Gene
SIO_000068: ncbigene

position:1059114:-1
position: 1059114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1061247:-1
position: 1061247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1059114-1061247:-1:exon

LOC116519815
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: LOC116519815
product: heat shock 70 kDa protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 529 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032233864.1
SIO_010081: LOC116519815
subclass of: SO_0000673
so part of: LOC116519815
location: complement(1059114..1061247)
location: region:1059114-1061247:-1
so has part: feature:1059114-1061247:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1059114-1061247:-1:exon

LOC116519815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: LOC116519815
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock 70 kDa protein-like
translation: MHGDGGRACLSSEEKARGRSGGGRGAHAGPKKSCPLGLPIFHHWQKARGCSGKEPPMGADFSHADAPKPTSRPETPSALRPGAARICPKGPAVGIDLGTTKSCVAVCQRGRVEILANDHNSRTTPSCVAFTERERLVGEPAEMQAGLNPENTICNVKRLIGRRYDDPSVQLCLKNWPYHVVEAGNGKAKVQVSHRGVKKVLYPEEISAMVLYKLKQVAEAALGRPVTQAVITVPAYFSDAQRQATIDAGAIAGLQVLSLVSEPTAAAVAYGLKESRPRKGKRNILIFDLGGGTFDVSLLTAQDGVFEVVATAGDSHLGGEDFDQRLANWLAQEFKDKFQEDPAESRKAMQRLKVACKKAKQALSSNTTATVSVDSLYKGIDFHTTVTRACFEDLCCDLFQATMVQVQQVLEEAGLKKSQVHEIGLGGGSTHIPMIQRLLSKFFDGQRLCKSISPEEVVAHGAAIQAAVLTGHRYQNLQNLLLLDVTPVSLGLETVGGVMDVVVKRNSPIPTKESRNFSTTEDQQSSLFLQIYEGERMLTKHNRLLGTITLGGLQPAPRGAPIIVVTFQIDHNNILTVSATERHTGNKKELAISDTRGRLDRDEMERILREEEEHRAQEKLEEEKREALNALEASTLQLKRAAEKSLDDRAKRRLLEICEEAAAWMEDNQLAPKKAYEERKKELEGVCSTILTHFSTGEAQQEKPKES
SIO_010081: LOC116519815
subclass of: SO_0000673
so part of: LOC116519815
location: complement(1059122..1061245)
location: region:1059122-1061245:-1
so has part: feature:1059122-1061245:-1:exon

XP_032089755.1
type: Protein
SIO_000068: ncbiprotein

position:1059122:-1
position: 1059122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1061245:-1
position: 1061245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1059122-1061245:-1:exon

LOC116519817
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: LOC116519817
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1062086..1064613)
location: region:1062086-1064613:-1
so has part: feature:1062086-1064613:-1:exon
subclass of: SO_0000010

116519817
type: Gene
SIO_000068: ncbigene

position:1062086:-1
position: 1062086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1064613:-1
position: 1064613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1062086-1064613:-1:exon

LOC116519817
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: LOC116519817
product: heat shock 70 kDa protein II-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 563 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032233867.1
SIO_010081: LOC116519817
subclass of: SO_0000673
so part of: LOC116519817
location: complement(1062086..1064613)
location: region:1062086-1064613:-1
so has part: feature:1062086-1064613:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1062086-1064613:-1:exon

LOC116519817
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: LOC116519817
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock 70 kDa protein II-like
translation: MPKQNDLAIGIDLGTTFSCVAVCQHDKVEIIANDQGKRTTPSYVAFTNTEHLIGDPAKSQAPLNPQNTVFDAKRLIGRKYEDAAVQEDMKHWPFTVVSHEEKLKVQVSHKGKQRTFYPEEISAMVLAKMKQTAEAYLGYSVSQAIVTVPAYFSDAQRQATIDAGVIAGLQILKLLNEPTAAAIAYGLDARHQEAGGRNILIFDLGGGTFDVSILSVEDGIFEVKATAGDTHLGGEDFDQRLVAHLAEEFKKKHRRDLHQDKKALQRLRTAAERAKCTLSSCTSASISVDSLFQGVDFHATLTRARFEDLCSDLFRATLKPLERALRDAKMSKGDIKDIVLVGGSTRIPKIRKLLKDFFNGRELNKGINPDEAVAYGAAVQAAILTGNRTAKMQNMFLLDVTPLSLGINTQGGVMATIIKRNSPVPTREIMEFTTTEDDQDTILFMVYEGERALTKHNHLLGMFTLKGIPPAPCGVPVILVTFSIDENNLLTVSAKDVETGTTSHLTISDTRGRLGREEIETIVQTAEEFRANDLSQQEKIEAMNSLESCTLELKRVAQEQLLDGKAKRRMLDMCDGAASWLEGNPLAEKEECEKRQKDLEEAWDSVYTGPGEGAEERMEGDPEAAEPKEDRE
SIO_010081: LOC116519817
subclass of: SO_0000673
so part of: LOC116519817
location: complement(1062143..1064041)
location: region:1062143-1064041:-1
so has part: feature:1062143-1064041:-1:exon

XP_032089758.1
type: Protein
SIO_000068: ncbiprotein

position:1062143:-1
position: 1062143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1064041:-1
position: 1064041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1062143-1064041:-1:exon

HJV
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: HJV
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1066353..1068366
location: region:1066353-1068366:1
so has part: feature:1066353-1068366:1:exon
subclass of: SO_0000010

116519838
type: Gene
SIO_000068: ncbigene

position:1066353:1
position: 1066353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1068366:1
position: 1068366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1066353-1068366:1:exon

HJV
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: HJV
product: hemojuvelin BMP co-receptor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032233899.1
SIO_010081: HJV
subclass of: SO_0000673
so part of: HJV
location: join(1066353..1066882,1067184..1068366)
location: region:1066353-1068366:1
so has part: feature:1066353-1066882:1:exon
so has part: feature:1067184-1068366:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1066353-1066882:1:exon

position:1066882:1
position: 1066882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1067184-1068366:1:exon

position:1067184:1
position: 1067184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HJV
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: HJV
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hemojuvelin
translation: MAQHNCSKEGPSPGPRPPQPRRAGSPDLCNYEKAFAHKRGRPPTYQHCASFGDPHVRTFGDDFHTCRAEGSWPLLDNHYLYAQATNSPVAKGSDATAMSKITIIFKNMKECVDQKVFQAEVENLPAAFVDGSVNGGERPGGDSLSILERAPGQHVEIRAAYIGTTIAVRRAGKQLSFSIRVAEEVASSFTEKQDLQLCVGGCPASQRISRHTGCCGHGTIATEKARRLCKEKLPVEDVYFHSCVFDVVASGDSNFTLAARGALEDARIFHPDSQKLHLFQQDAARQVATSSFLCLTLAAILLLAWEI
SIO_010081: HJV
subclass of: SO_0000673
so part of: HJV
location: join(1066583..1066882,1067184..1067807)
location: region:1066583-1067807:1
so has part: feature:1066583-1066882:1:exon
so has part: feature:1067184-1067807:1:exon

XP_032089790.1
type: Protein
SIO_000068: ncbiprotein

position:1066583:1
position: 1066583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1067807:1
position: 1067807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1066583-1066882:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1067184-1067807:1:exon

KIRREL1
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: KIRREL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1073814..1102502)
location: region:1073814-1102502:-1
so has part: feature:1073814-1102502:-1:exon
subclass of: SO_0000010

116519812
type: Gene
SIO_000068: ncbigene

position:1073814:-1
position: 1073814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1102502:-1
position: 1102502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1073814-1102502:-1:exon

KIRREL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: KIRREL1
product: kirre like nephrin family adhesion molecule 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_032233859.1
SIO_010081: KIRREL1
subclass of: SO_0000673
so part of: KIRREL1
location: complement(join(1073814..1076708,1077006..1077083,1077672..1077811,1078251..1078358,1078750..1078948,1079072..1079172,1079347..1079473,1079646..1079773,1079946..1080094,1080192..1080297,1080681..1080831,1081671..1081828,1082173..1082322,1083156..1083305,1102356..1102502))
location: region:1073814-1102502:-1
so has part: feature:1102356-1102502:-1:exon
so has part: feature:1083156-1083305:-1:exon
so has part: feature:1082173-1082322:-1:exon
so has part: feature:1081671-1081828:-1:exon
so has part: feature:1080681-1080831:-1:exon
so has part: feature:1080192-1080297:-1:exon
so has part: feature:1079946-1080094:-1:exon
so has part: feature:1079646-1079773:-1:exon
so has part: feature:1079347-1079473:-1:exon
so has part: feature:1079072-1079172:-1:exon
so has part: feature:1078750-1078948:-1:exon
so has part: feature:1078251-1078358:-1:exon
so has part: feature:1077672-1077811:-1:exon
so has part: feature:1077006-1077083:-1:exon
so has part: feature:1073814-1076708:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1102356-1102502:-1:exon

position:1102356:-1
position: 1102356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1083156-1083305:-1:exon

position:1083156:-1
position: 1083156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1083305:-1
position: 1083305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1082173-1082322:-1:exon

position:1082173:-1
position: 1082173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1082322:-1
position: 1082322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1081671-1081828:-1:exon

position:1081671:-1
position: 1081671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1081828:-1
position: 1081828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1080681-1080831:-1:exon

position:1080681:-1
position: 1080681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1080831:-1
position: 1080831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1080192-1080297:-1:exon

position:1080192:-1
position: 1080192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1080297:-1
position: 1080297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1079946-1080094:-1:exon

position:1079946:-1
position: 1079946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1080094:-1
position: 1080094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1079646-1079773:-1:exon

position:1079646:-1
position: 1079646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1079773:-1
position: 1079773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1079347-1079473:-1:exon

position:1079347:-1
position: 1079347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1079473:-1
position: 1079473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1079072-1079172:-1:exon

position:1079072:-1
position: 1079072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1079172:-1
position: 1079172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1078750-1078948:-1:exon

position:1078750:-1
position: 1078750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1078948:-1
position: 1078948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1078251-1078358:-1:exon

position:1078251:-1
position: 1078251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1078358:-1
position: 1078358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1077672-1077811:-1:exon

position:1077672:-1
position: 1077672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1077811:-1
position: 1077811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1077006-1077083:-1:exon

position:1077006:-1
position: 1077006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1077083:-1
position: 1077083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1073814-1076708:-1:exon

position:1076708:-1
position: 1076708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KIRREL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: KIRREL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kin of IRRE-like protein 1
translation: MLPLLAVLCVFWGVEDGFAEVLQTRFLEEPEDQTVVAGQKVVLSCVVLNYSGIVQWTKDGLALGMGQGLKAWPRYRIIGVTDSGQFNLEVTDAELSDDALYECQATEAALRSRRAKLTVLIPPEDPMIDGGPEILLRAGTPHNLTCRAQNAKPAATILWFRDGLPQSEAATATEVLMDGKRETTISQLLITPTDLDIGRVYVCRCSNDAIPAGKEASITLNVHHPPTVTLSIQPQTVQEGERVTFTCLANANPEIKGYRWAKGGTIIEDAKESKYETQVDYTFFTEPVSCEVRNDVGSTNVSTLVDVHFAPRIVVDPKPLTTDIGSDVTLTCVWTGNPPLTLTWAKKESNMILGNSNQLHIKSVKQSDAGLYICKAIVPRIGVGEREVALHVNGPPIISSNSVQYAVRGDRGKVECFIGSTPLPDRIAWGWKENILETGTLERYTVERSNTRDGVLSTLTINNVMEVDFQTRYNCTAWNAFGPQTAIIQLEEKEVLPVGIIAGATIAAGILLTFCFIALGCFLYRRRKGSRKDVTLRKLDIKVETVNREPLTLHTDREEDTASVSTATRVMKAIYSPFKDDADLKPDLRCDTVDTREEYELKDPTNGYYNVRAHEDRPSSRTLLYTDYRTPGPARYDGRPSSRLSHSSGYAQLSGYGRGPASDFSGDPVPGPTPGTAAADTASQLSYENYGGHSGFPPSAGYATYRLGYSQPPPPTLDRAAYDTYDPLGKYTTATRFSYTSSDYGQRFQQRMQTHV
SIO_010081: KIRREL1
subclass of: SO_0000673
so part of: KIRREL1
location: complement(join(1076244..1076708,1077006..1077083,1077672..1077811,1078251..1078358,1078750..1078948,1079072..1079172,1079347..1079473,1079646..1079773,1079946..1080094,1080192..1080297,1080681..1080831,1081671..1081828,1082173..1082322,1083156..1083305,1102356..1102416))
location: region:1076244-1102416:-1
so has part: feature:1102356-1102416:-1:exon
so has part: feature:1083156-1083305:-1:exon
so has part: feature:1082173-1082322:-1:exon
so has part: feature:1081671-1081828:-1:exon
so has part: feature:1080681-1080831:-1:exon
so has part: feature:1080192-1080297:-1:exon
so has part: feature:1079946-1080094:-1:exon
so has part: feature:1079646-1079773:-1:exon
so has part: feature:1079347-1079473:-1:exon
so has part: feature:1079072-1079172:-1:exon
so has part: feature:1078750-1078948:-1:exon
so has part: feature:1078251-1078358:-1:exon
so has part: feature:1077672-1077811:-1:exon
so has part: feature:1077006-1077083:-1:exon
so has part: feature:1076244-1076708:-1:exon

XP_032089750.1
type: Protein
SIO_000068: ncbiprotein

position:1076244:-1
position: 1076244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1102416:-1
position: 1102416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1102356-1102416:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1083156-1083305:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1082173-1082322:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1081671-1081828:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1080681-1080831:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1080192-1080297:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1079946-1080094:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1079646-1079773:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1079347-1079473:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1079072-1079172:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1078750-1078948:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1078251-1078358:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1077672-1077811:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1077006-1077083:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1076244-1076708:-1:exon

LOC116519837
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: LOC116519837
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1106164..1110230)
location: region:1106164-1110230:-1
so has part: feature:1106164-1110230:-1:exon
subclass of: SO_0000010

116519837
type: Gene
SIO_000068: ncbigene

position:1106164:-1
position: 1106164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1110230:-1
position: 1110230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1106164-1110230:-1:exon

LOC116519837
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: LOC116519837
product: SLAM family member 5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_032233898.1
SIO_010081: LOC116519837
subclass of: SO_0000673
so part of: LOC116519837
location: complement(join(1106164..1106666,1108082..1108348,1109035..1109352,1110126..1110230))
location: region:1106164-1110230:-1
so has part: feature:1110126-1110230:-1:exon
so has part: feature:1109035-1109352:-1:exon
so has part: feature:1108082-1108348:-1:exon
so has part: feature:1106164-1106666:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1110126-1110230:-1:exon

position:1110126:-1
position: 1110126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1109035-1109352:-1:exon

position:1109035:-1
position: 1109035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1109352:-1
position: 1109352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1108082-1108348:-1:exon

position:1108082:-1
position: 1108082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1108348:-1
position: 1108348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1106164-1106666:-1:exon

position:1106666:-1
position: 1106666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116519837
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: LOC116519837
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SLAM family member 5-like
translation: MDSHCVLLAVLLLFCSAGASDSPWKAVRVGDAVTFPVVPPKGQRLTNILLRDSSRQQAVAIWMDSKEITVVDIKYAGRVTFQMDEMAFRIANLSLDDGGKYETSTGFTSSSPVLLGSFLVAVFNVTQRISPLKNDSCLIYLDCEAGMGPGHRVTYAWKDTKAGTTLSREARLTQLVHTDQQRDYACVAQSSAGQSTLSFVLQHPCVPSAASPGPWALGSLLVMAALLLLLL
SIO_010081: LOC116519837
subclass of: SO_0000673
so part of: LOC116519837
location: complement(join(1106608..1106666,1108082..1108348,1109035..1109352,1110126..1110177))
location: region:1106608-1110177:-1
so has part: feature:1110126-1110177:-1:exon
so has part: feature:1109035-1109352:-1:exon
so has part: feature:1108082-1108348:-1:exon
so has part: feature:1106608-1106666:-1:exon

XP_032089789.1
type: Protein
SIO_000068: ncbiprotein

position:1106608:-1
position: 1106608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1110177:-1
position: 1110177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1110126-1110177:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1109035-1109352:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1108082-1108348:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1106608-1106666:-1:exon

KCNJ10
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: KCNJ10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1114448..1116319)
location: region:1114448-1116319:-1
so has part: feature:1114448-1116319:-1:exon
subclass of: SO_0000010

116519826
type: Gene
SIO_000068: ncbigene

position:1114448:-1
position: 1114448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1116319:-1
position: 1116319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1114448-1116319:-1:exon

KCNJ10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: KCNJ10
product: potassium inwardly rectifying channel subfamily J member 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032233881.1
SIO_010081: KCNJ10
subclass of: SO_0000673
so part of: KCNJ10
location: complement(1114448..1116319)
location: region:1114448-1116319:-1
so has part: feature:1114448-1116319:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1114448-1116319:-1:exon

KCNJ10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: KCNJ10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-sensitive inward rectifier potassium channel 10
translation: MEGVGGYFSFVLQPKCRCDCPPVSPWCERPLTCPSLPLALSPAQMTSATKVYYSQTTQTDSHPLIGPALRKRRVMTKDGRSNVRMEHIADKRFLYLKDLWTTFIDMQWRYKLVLFSASFAGTWFLFGVVWYLVALLHGDLLEFDPPANHTPCVMQVHTLTGAFLFSLESQTTIGYGFRYISEECPLAIVLLISQLVLTTITEIFITGTFLAKIARPKKRAETIKFSQNAVVAQHDGRTCLMIRVANMRKSLLIGCQVTGKLLQTYLTKEGENVRLNQVNVDFQVDTSSDSPFLILPLTFYHVVNERSPFRDLTLHTGEGDFELVVILSGTVESTSATCQVRTSYLPEEILWGYEFTPVISLSASGKYVADFSMFEQVIKVAPPRCLHETPRYGDPEKLKLEESLREKAERGSSPLSVRISNV
SIO_010081: KCNJ10
subclass of: SO_0000673
so part of: KCNJ10
location: complement(1115005..1116273)
location: region:1115005-1116273:-1
so has part: feature:1115005-1116273:-1:exon

XP_032089772.1
type: Protein
SIO_000068: ncbiprotein

position:1115005:-1
position: 1115005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1116273:-1
position: 1116273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1115005-1116273:-1:exon

KCNJ9
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: KCNJ9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1125738..1128499
location: region:1125738-1128499:1
so has part: feature:1125738-1128499:1:exon
subclass of: SO_0000010

116519828
type: Gene
SIO_000068: ncbigene

position:1125738:1
position: 1125738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1128499:1
position: 1128499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1125738-1128499:1:exon

KCNJ9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: KCNJ9
product: potassium inwardly rectifying channel subfamily J member 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 64 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_032233884.1
SIO_010081: KCNJ9
subclass of: SO_0000673
so part of: KCNJ9
location: join(1125738..1126911,1127207..1128499)
location: region:1125738-1128499:1
so has part: feature:1125738-1126911:1:exon
so has part: feature:1127207-1128499:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1125738-1126911:1:exon

position:1126911:1
position: 1126911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1127207-1128499:1:exon

position:1127207:1
position: 1127207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KCNJ9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: KCNJ9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G protein-activated inward rectifier potassium channel 3
translation: MAKDNPAFAAVPKTPVSEGKAPLSSQPVKSAALRRLGEGPEKAEKKRGRQRYVEKDGKCNVQHGNVRETYRYLTDIFTTLVDLKWRFSLLVFILAYAVTWLFFGLIWWFIAYCRGDLDHLGDDAWTPCVNNLNGFVSAFLFSIETETTIGYGHRVITDKCPEGIVLLLLQAILGSMVNAFMVGCMFVKISQPNKRAETLVFSSHAVISLRDDHLCLMFRVGDLRNSHIVEASIRAKLIKSKQTQEGEFIPLNQTDLSVGFETGDDRLFLVSPLIISHEINEQSPFWEVSKEQLRKDEFEIVVILEGMVEATGMTCQARSSYLVDEVLWGHRFMSVLSLEDGFYEVDYNSFHQTFEVPTPSCSAREMAEAAARMDAHLYWSIPSRLDEKVEEGTEKGEKERNGNLTGTENESKV
SIO_010081: KCNJ9
subclass of: SO_0000673
so part of: KCNJ9
location: join(1125978..1126911,1127207..1127514)
location: region:1125978-1127514:1
so has part: feature:1125978-1126911:1:exon
so has part: feature:1127207-1127514:1:exon

XP_032089775.1
type: Protein
SIO_000068: ncbiprotein

position:1125978:1
position: 1125978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1127514:1
position: 1127514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1125978-1126911:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1127207-1127514:1:exon

IGSF8
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: IGSF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1129255..1136034)
location: region:1129255-1136034:-1
so has part: feature:1129255-1136034:-1:exon
subclass of: SO_0000010

116519818
type: Gene
SIO_000068: ncbigene

position:1129255:-1
position: 1129255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1136034:-1
position: 1136034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1129255-1136034:-1:exon

IGSF8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: IGSF8
product: immunoglobulin superfamily member 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_032233868.1
SIO_010081: IGSF8
subclass of: SO_0000673
so part of: IGSF8
location: complement(join(1129255..1130274,1130523..1130659,1130807..1131211,1132976..1133401,1133710..1134174,1134466..1134843,1135899..1136034))
location: region:1129255-1136034:-1
so has part: feature:1135899-1136034:-1:exon
so has part: feature:1134466-1134843:-1:exon
so has part: feature:1133710-1134174:-1:exon
so has part: feature:1132976-1133401:-1:exon
so has part: feature:1130807-1131211:-1:exon
so has part: feature:1130523-1130659:-1:exon
so has part: feature:1129255-1130274:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1135899-1136034:-1:exon

position:1135899:-1
position: 1135899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1134466-1134843:-1:exon

position:1134466:-1
position: 1134466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1134843:-1
position: 1134843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1133710-1134174:-1:exon

position:1133710:-1
position: 1133710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1134174:-1
position: 1134174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1132976-1133401:-1:exon

position:1132976:-1
position: 1132976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1133401:-1
position: 1133401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1130807-1131211:-1:exon

position:1130807:-1
position: 1130807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1131211:-1
position: 1131211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1130523-1130659:-1:exon

position:1130523:-1
position: 1130523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1130659:-1
position: 1130659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1129255-1130274:-1:exon

position:1130274:-1
position: 1130274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IGSF8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: IGSF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: immunoglobulin superfamily member 8
translation: MDAPSRRLLLLLLLLPLAAQLGGARKVQLPPGPLYRVEGATLAIPCNVSEFEGPSLQQFEWFLYRPSAPDISIGMVSTRDPNFPYAVFGARVQAGNVSILRLRGDAVELRVRAVRMEDTGVYECYTPTTDSKYQGSYSAKVEVRVIPDQLSVSAAPPSAAKPPLLGRGAPPPAQMVLLESQDLLLTCSVASGTQQHTHLSASFTVSAPGSPRLQQEVIGLRRDFALESTGRFAQRRQARELSLVKLGDWKYQMALDRLRPEDSGTYHCAAGEWIQDPDGSWQQITEKRVALADVSVQSIVSQLSVSAGPPRALLSPGDSLELFCNVSGAAVLLLPHVALAVSWELRKEADGDGHLVARLEGSGGLVLGQNYANRNVGRRHVSLQKLASPLGAFLLRIESAQPADVGSYRCEVQVFSRSLSAEFHPLATLRSEVISVEVKSQAVVLGAVAWLPWPTLHRGSTADLRCNVSVESAQDVHLALSWWAELPQPDSPPLGVLLASVDREGVAQLEKTPSGGALSVDKVGPQSHRMRLHAVQPSDEGGYYCAVTAWVRSPDRSWYQAASAKSNVVTVYPYPLAMDTLLIPLAVGISSALLLGVSILVSVTCCFMARLRKR
SIO_010081: IGSF8
subclass of: SO_0000673
so part of: IGSF8
location: complement(join(1130544..1130659,1130807..1131211,1132976..1133401,1133710..1134174,1134466..1134843,1135899..1135953))
location: region:1130544-1135953:-1
so has part: feature:1135899-1135953:-1:exon
so has part: feature:1134466-1134843:-1:exon
so has part: feature:1133710-1134174:-1:exon
so has part: feature:1132976-1133401:-1:exon
so has part: feature:1130807-1131211:-1:exon
so has part: feature:1130544-1130659:-1:exon

XP_032089759.1
type: Protein
SIO_000068: ncbiprotein

position:1130544:-1
position: 1130544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1135953:-1
position: 1135953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1135899-1135953:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1134466-1134843:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1133710-1134174:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1132976-1133401:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1130807-1131211:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1130544-1130659:-1:exon

LOC116519810
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: LOC116519810
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1141107..1151342
location: region:1141107-1151342:1
so has part: feature:1141107-1151342:1:exon
subclass of: SO_0000010

116519810
type: Gene
SIO_000068: ncbigene

position:1141107:1
position: 1141107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1151342:1
position: 1151342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1141107-1151342:1:exon

LOC116519810
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: LOC116519810
product: sodium/potassium-transporting ATPase subunit alpha-2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 128 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032233856.1
SIO_010081: LOC116519810
subclass of: SO_0000673
so part of: LOC116519810
location: join(1141107..1141190,1143004..1143108,1143238..1143297,1143737..1143940,1145491..1145604,1145788..1145922,1146111..1146228,1146343..1146611,1146890..1147088,1147303..1147412,1147715..1147849,1148032..1148221,1148335..1148510,1148676..1148812,1148899..1149049,1149302..1149470,1149556..1149710,1149800..1149923,1150004..1150149,1150309..1150439,1150604..1150705,1150800..1150891,1151235..1151342)
location: region:1141107-1151342:1
so has part: feature:1141107-1141190:1:exon
so has part: feature:1143004-1143108:1:exon
so has part: feature:1143238-1143297:1:exon
so has part: feature:1143737-1143940:1:exon
so has part: feature:1145491-1145604:1:exon
so has part: feature:1145788-1145922:1:exon
so has part: feature:1146111-1146228:1:exon
so has part: feature:1146343-1146611:1:exon
so has part: feature:1146890-1147088:1:exon
so has part: feature:1147303-1147412:1:exon
so has part: feature:1147715-1147849:1:exon
so has part: feature:1148032-1148221:1:exon
so has part: feature:1148335-1148510:1:exon
so has part: feature:1148676-1148812:1:exon
so has part: feature:1148899-1149049:1:exon
so has part: feature:1149302-1149470:1:exon
so has part: feature:1149556-1149710:1:exon
so has part: feature:1149800-1149923:1:exon
so has part: feature:1150004-1150149:1:exon
so has part: feature:1150309-1150439:1:exon
so has part: feature:1150604-1150705:1:exon
so has part: feature:1150800-1150891:1:exon
so has part: feature:1151235-1151342:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1141107-1141190:1:exon

position:1141190:1
position: 1141190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1143004-1143108:1:exon

position:1143004:1
position: 1143004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1143108:1
position: 1143108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1143238-1143297:1:exon

position:1143238:1
position: 1143238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1143297:1
position: 1143297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1143737-1143940:1:exon

position:1143737:1
position: 1143737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1143940:1
position: 1143940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1145491-1145604:1:exon

position:1145491:1
position: 1145491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1145604:1
position: 1145604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1145788-1145922:1:exon

position:1145788:1
position: 1145788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1145922:1
position: 1145922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1146111-1146228:1:exon

position:1146111:1
position: 1146111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1146228:1
position: 1146228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1146343-1146611:1:exon

position:1146343:1
position: 1146343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1146611:1
position: 1146611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1146890-1147088:1:exon

position:1146890:1
position: 1146890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1147088:1
position: 1147088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1147303-1147412:1:exon

position:1147303:1
position: 1147303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1147412:1
position: 1147412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1147715-1147849:1:exon

position:1147715:1
position: 1147715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1147849:1
position: 1147849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1148032-1148221:1:exon

position:1148032:1
position: 1148032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1148221:1
position: 1148221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1148335-1148510:1:exon

position:1148335:1
position: 1148335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1148510:1
position: 1148510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1148676-1148812:1:exon

position:1148676:1
position: 1148676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1148812:1
position: 1148812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1148899-1149049:1:exon

position:1148899:1
position: 1148899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1149049:1
position: 1149049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1149302-1149470:1:exon

position:1149302:1
position: 1149302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1149470:1
position: 1149470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1149556-1149710:1:exon

position:1149556:1
position: 1149556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1149710:1
position: 1149710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1149800-1149923:1:exon

position:1149800:1
position: 1149800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1149923:1
position: 1149923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1150004-1150149:1:exon

position:1150004:1
position: 1150004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1150149:1
position: 1150149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1150309-1150439:1:exon

position:1150309:1
position: 1150309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1150439:1
position: 1150439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1150604-1150705:1:exon

position:1150604:1
position: 1150604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1150705:1
position: 1150705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1150800-1150891:1:exon

position:1150800:1
position: 1150800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1150891:1
position: 1150891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1151235-1151342:1:exon

position:1151235:1
position: 1151235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116519810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: LOC116519810
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/potassium-transporting ATPase subunit alpha-2
translation: MGKGSGRESVPLGPTAENGGGKKKQKEKELDELKKEVNLDDHRLSLDEISRKYQVDLSKGLTNTRAAEILAQDGPNALTPPPTIPEWVKFCRQLFGGFSILLWIGAILCFLAYSIKAAIEDEVANDNLYLGVVLAAVVIVTGCFSYYQEAKSSKIMDSFKNMVPQQALVIREGEKMQINAENVVVGDLVEVRGGDRIPADLRVISSHGCKVDNSSLTGESEPQTRSPEFTHENPLETRNICFFSTNCVEGTARGIVIFTGDRTVMGRIASLASGLEVGRTPIAMEIEHFIQIITGVAVFLGMSFFILSLILGYSWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGATFDKRSSTWTALARIAGLCNRAVFKAGQEKVPISKKDTAGDASESALLKCIELSCGSVKKMRERNPKVTEIPFNSTNKYQLSIHEPEDRPNGYLLVMKGAPERILDRCSTILMQGQEVPLDEEMRDAFQNAYLELGGLGERVLGFCLYYLPEDQFPRGFKFDADEVNFPITNLCFVGLMSMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAIRLNIPINQVNPREAKACVVHGSDLKDMSPKHLDEILRDHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGIAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLFFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEAAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPTTLLGIRLDWDDRSKNDLEDSYGQEWTYEQRKVVEFTCHTAFFASIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLLEETALAAFMSYCPGMGVALRMYPLKVTWWFCAFPYSLLIFSYDEVRKLFLRRYPGGWVEKETYY
SIO_010081: LOC116519810
subclass of: SO_0000673
so part of: LOC116519810
location: join(1141179..1141190,1143004..1143108,1143238..1143297,1143737..1143940,1145491..1145604,1145788..1145922,1146111..1146228,1146343..1146611,1146890..1147088,1147303..1147412,1147715..1147849,1148032..1148221,1148335..1148510,1148676..1148812,1148899..1149049,1149302..1149470,1149556..1149710,1149800..1149923,1150004..1150149,1150309..1150439,1150604..1150705,1150800..1150891,1151235..1151263)
location: region:1141179-1151263:1
so has part: feature:1141179-1141190:1:exon
so has part: feature:1143004-1143108:1:exon
so has part: feature:1143238-1143297:1:exon
so has part: feature:1143737-1143940:1:exon
so has part: feature:1145491-1145604:1:exon
so has part: feature:1145788-1145922:1:exon
so has part: feature:1146111-1146228:1:exon
so has part: feature:1146343-1146611:1:exon
so has part: feature:1146890-1147088:1:exon
so has part: feature:1147303-1147412:1:exon
so has part: feature:1147715-1147849:1:exon
so has part: feature:1148032-1148221:1:exon
so has part: feature:1148335-1148510:1:exon
so has part: feature:1148676-1148812:1:exon
so has part: feature:1148899-1149049:1:exon
so has part: feature:1149302-1149470:1:exon
so has part: feature:1149556-1149710:1:exon
so has part: feature:1149800-1149923:1:exon
so has part: feature:1150004-1150149:1:exon
so has part: feature:1150309-1150439:1:exon
so has part: feature:1150604-1150705:1:exon
so has part: feature:1150800-1150891:1:exon
so has part: feature:1151235-1151263:1:exon

XP_032089747.1
type: Protein
SIO_000068: ncbiprotein

position:1141179:1
position: 1141179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1151263:1
position: 1151263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1141179-1141190:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1143004-1143108:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1143238-1143297:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1143737-1143940:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1145491-1145604:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1145788-1145922:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1146111-1146228:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1146343-1146611:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1146890-1147088:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1147303-1147412:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1147715-1147849:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1148032-1148221:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1148335-1148510:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1148676-1148812:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1148899-1149049:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1149302-1149470:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1149556-1149710:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1149800-1149923:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1150004-1150149:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1150309-1150439:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1150604-1150705:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1150800-1150891:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1151235-1151263:1:exon

CASQ1
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: CASQ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1154829..1161970
location: region:1154829-1161970:1
so has part: feature:1154829-1161970:1:exon
subclass of: SO_0000010

116519833
type: Gene
SIO_000068: ncbigene

position:1154829:1
position: 1154829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1161970:1
position: 1161970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1154829-1161970:1:exon

CASQ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: CASQ1
product: calsequestrin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 23% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032233892.1
SIO_010081: CASQ1
subclass of: SO_0000673
so part of: CASQ1
location: join(1154829..1155071,1156560..1156644,1157203..1157303,1157584..1157695,1157866..1157939,1158188..1158318,1159265..1159310,1160503..1160557,1160850..1160950,1161403..1161477,1161739..1161970)
location: region:1154829-1161970:1
so has part: feature:1154829-1155071:1:exon
so has part: feature:1156560-1156644:1:exon
so has part: feature:1157203-1157303:1:exon
so has part: feature:1157584-1157695:1:exon
so has part: feature:1157866-1157939:1:exon
so has part: feature:1158188-1158318:1:exon
so has part: feature:1159265-1159310:1:exon
so has part: feature:1160503-1160557:1:exon
so has part: feature:1160850-1160950:1:exon
so has part: feature:1161403-1161477:1:exon
so has part: feature:1161739-1161970:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1154829-1155071:1:exon

position:1155071:1
position: 1155071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1156560-1156644:1:exon

position:1156560:1
position: 1156560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1156644:1
position: 1156644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1157203-1157303:1:exon

position:1157203:1
position: 1157203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1157303:1
position: 1157303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1157584-1157695:1:exon

position:1157584:1
position: 1157584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1157695:1
position: 1157695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1157866-1157939:1:exon

position:1157866:1
position: 1157866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1157939:1
position: 1157939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1158188-1158318:1:exon

position:1158188:1
position: 1158188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1158318:1
position: 1158318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1159265-1159310:1:exon

position:1159265:1
position: 1159265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1159310:1
position: 1159310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1160503-1160557:1:exon

position:1160503:1
position: 1160503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1160557:1
position: 1160557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1160850-1160950:1:exon

position:1160850:1
position: 1160850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1160950:1
position: 1160950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1161403-1161477:1:exon

position:1161403:1
position: 1161403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1161477:1
position: 1161477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1161739-1161970:1:exon

position:1161739:1
position: 1161739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CASQ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: CASQ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calsequestrin-1
translation: MKWLGLTLAALLLALAGPVARGEEGLDFPEYDGIDRVIDVNMKNYKGVLKKYEVLALLYHEPVGEDKASQKQFELEELILELAAQVLEDKGIGFGLVDAEKDAAVAKKLGLTEEDSVYVFKEDEVIEYDGEFSADTLVEFLLDVLEDPVEFIDGENELEAFERIEDEPKLIGYFKNEDSEHFKAFEDAAEEFHPYIPFFATFDSKVAKKLSLKLNEIDYYEPFMEKPVTIPDKPNSEEEIVQFMEEHKRPTLRKLHADSMYETWEDDMDGIHIVAFAEEDDPDGYEFLEILKEVAQDNTDNPDLSIIWIDPEDFPLLIPYWEKTFDIDLSRPQIGVVNVTDADSIWMDMDDEEDLPSAEELEDWIEDVLEGEINTEDDDDDDDDDDDDDD
SIO_010081: CASQ1
subclass of: SO_0000673
so part of: CASQ1
location: join(1154829..1155071,1156560..1156644,1157203..1157303,1157584..1157695,1157866..1157939,1158188..1158318,1159265..1159310,1160503..1160557,1160850..1160950,1161403..1161477,1161739..1161888)
location: region:1154829-1161888:1
so has part: feature:1154829-1155071:1:exon
so has part: feature:1156560-1156644:1:exon
so has part: feature:1157203-1157303:1:exon
so has part: feature:1157584-1157695:1:exon
so has part: feature:1157866-1157939:1:exon
so has part: feature:1158188-1158318:1:exon
so has part: feature:1159265-1159310:1:exon
so has part: feature:1160503-1160557:1:exon
so has part: feature:1160850-1160950:1:exon
so has part: feature:1161403-1161477:1:exon
so has part: feature:1161739-1161888:1:exon

XP_032089783.1
type: Protein
SIO_000068: ncbiprotein

position:1161888:1
position: 1161888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1154829-1155071:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1156560-1156644:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1157203-1157303:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1157584-1157695:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1157866-1157939:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1158188-1158318:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1159265-1159310:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1160503-1160557:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1160850-1160950:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1161403-1161477:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1161739-1161888:1:exon

PEA15
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: PEA15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1166453..1183421
location: region:1166453-1183421:1
so has part: feature:1166453-1183421:1:exon
subclass of: SO_0000010

116519843
type: Gene
SIO_000068: ncbigene

position:1166453:1
position: 1166453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1183421:1
position: 1183421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1166453-1183421:1:exon

PEA15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: PEA15
product: proliferation and apoptosis adaptor protein 15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_032233905.1
SIO_010081: PEA15
subclass of: SO_0000673
so part of: PEA15
location: join(1166453..1166614,1179737..1179910,1180705..1180860,1180969..1183421)
location: region:1166453-1183421:1
so has part: feature:1166453-1166614:1:exon
so has part: feature:1179737-1179910:1:exon
so has part: feature:1180705-1180860:1:exon
so has part: feature:1180969-1183421:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1166453-1166614:1:exon

position:1166614:1
position: 1166614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1179737-1179910:1:exon

position:1179737:1
position: 1179737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1179910:1
position: 1179910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1180705-1180860:1:exon

position:1180705:1
position: 1180705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1180860:1
position: 1180860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1180969-1183421:1:exon

position:1180969:1
position: 1180969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PEA15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: PEA15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: astrocytic phosphoprotein PEA-15
translation: MAEYRSLLEGLAENITNEDLDQLKSACKEDIPSERHEEIATGKDWFAFLEKHKKLDKDNLSYIEHIFEISRRPDLLTRVVEYRTQVLKISEEDEVDTKLTRIPSAKKYKDIIRQPSEEEIIKLAPPPKKA
SIO_010081: PEA15
subclass of: SO_0000673
so part of: PEA15
location: join(1179739..1179910,1180705..1180860,1180969..1181033)
location: region:1179739-1181033:1
so has part: feature:1179739-1179910:1:exon
so has part: feature:1180705-1180860:1:exon
so has part: feature:1180969-1181033:1:exon

XP_032089796.1
type: Protein
SIO_000068: ncbiprotein

position:1179739:1
position: 1179739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1181033:1
position: 1181033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1179739-1179910:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1180705-1180860:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1180969-1181033:1:exon

DCAF8
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: DCAF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1184239..1194623)
location: region:1184239-1194623:-1
so has part: feature:1184239-1194623:-1:exon
subclass of: SO_0000010

116520096
type: Gene
SIO_000068: ncbigene

position:1184239:-1
position: 1184239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1194623:-1
position: 1194623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1184239-1194623:-1:exon

DCAF8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: DCAF8
product: DDB1 and CUL4 associated factor 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032234250.1
SIO_010081: DCAF8
subclass of: SO_0000673
so part of: DCAF8
location: complement(join(1184239..1185188,1185315..1185431,1185527..1185646,1185799..1185929,1186315..1186422,1186553..1186610,1186856..1186928,1187182..1187292,1187370..1187464,1187827..1187967,1188221..1188921,1189211..1189263,1192793..1192872,1193095..1193139,1193212..1193388,1193558..1193722,1193837..1193922,1194027..1194192,1194285..1194400,1194489..1194623))
location: region:1184239-1194623:-1
so has part: feature:1194489-1194623:-1:exon
so has part: feature:1194285-1194400:-1:exon
so has part: feature:1194027-1194192:-1:exon
so has part: feature:1193837-1193922:-1:exon
so has part: feature:1193558-1193722:-1:exon
so has part: feature:1193212-1193388:-1:exon
so has part: feature:1193095-1193139:-1:exon
so has part: feature:1192793-1192872:-1:exon
so has part: feature:1189211-1189263:-1:exon
so has part: feature:1188221-1188921:-1:exon
so has part: feature:1187827-1187967:-1:exon
so has part: feature:1187370-1187464:-1:exon
so has part: feature:1187182-1187292:-1:exon
so has part: feature:1186856-1186928:-1:exon
so has part: feature:1186553-1186610:-1:exon
so has part: feature:1186315-1186422:-1:exon
so has part: feature:1185799-1185929:-1:exon
so has part: feature:1185527-1185646:-1:exon
so has part: feature:1185315-1185431:-1:exon
so has part: feature:1184239-1185188:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1194489-1194623:-1:exon

position:1194489:-1
position: 1194489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1194285-1194400:-1:exon

position:1194285:-1
position: 1194285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1194400:-1
position: 1194400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1194027-1194192:-1:exon

position:1194027:-1
position: 1194027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1194192:-1
position: 1194192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1193837-1193922:-1:exon

position:1193837:-1
position: 1193837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1193922:-1
position: 1193922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1193558-1193722:-1:exon

position:1193558:-1
position: 1193558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1193722:-1
position: 1193722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1193212-1193388:-1:exon

position:1193212:-1
position: 1193212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1193388:-1
position: 1193388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1193095-1193139:-1:exon

position:1193095:-1
position: 1193095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1193139:-1
position: 1193139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1192793-1192872:-1:exon

position:1192793:-1
position: 1192793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1192872:-1
position: 1192872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1189211-1189263:-1:exon

position:1189211:-1
position: 1189211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1189263:-1
position: 1189263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1188221-1188921:-1:exon

position:1188221:-1
position: 1188221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1188921:-1
position: 1188921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1187827-1187967:-1:exon

position:1187827:-1
position: 1187827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1187967:-1
position: 1187967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1187370-1187464:-1:exon

position:1187370:-1
position: 1187370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1187464:-1
position: 1187464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1187182-1187292:-1:exon

position:1187182:-1
position: 1187182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1187292:-1
position: 1187292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1186856-1186928:-1:exon

position:1186856:-1
position: 1186856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1186928:-1
position: 1186928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1186553-1186610:-1:exon

position:1186553:-1
position: 1186553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1186610:-1
position: 1186610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1186315-1186422:-1:exon

position:1186315:-1
position: 1186315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1186422:-1
position: 1186422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1185799-1185929:-1:exon

position:1185799:-1
position: 1185799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1185929:-1
position: 1185929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1185527-1185646:-1:exon

position:1185527:-1
position: 1185527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1185646:-1
position: 1185646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1185315-1185431:-1:exon

position:1185315:-1
position: 1185315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1185431:-1
position: 1185431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1184239-1185188:-1:exon

position:1185188:-1
position: 1185188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DCAF8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: DCAF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DDB1- and CUL4-associated factor 8
translation: MAAPGTEPDAELEELLASALEDFERAAPAPAEPAGGGGGGGGGGGEGAAEPAGEAQGRLLAAQETFFQELFEGELASQASAEFERAMEELAAEEPMLVQQFQKLSAAAGRVGSDPASRQEFTSCLKETLTGLARNADGLQSSGVSEEELSRTMEGLGLEEGDGGEGSLWPIMHSIMQNLLSKDVLYPSLKEITEKYPEWLQRHRDSLPKEQYEKYQEQQRVMGRICEQFEAEQPTDGDPEHRARFETILDLMQQLQDLGHPPKELAGESPPGLNFDLEGLNLPDAGGAGGEQCQIIKMSDAGNSTEGKTNIPNGSLSSSPEEMSGTTEGPETSSGVEVEASDLSLSLTGDEVGPSQTYTESSTEEKDSDSMEETGHYSINELNRTYDHSPSEEEEEEAEEEEEEEEEQQQEEAEVEAQRSRWRAHRKRPNQDRDSSDDERALEDWVASETMALPLPRWRALQALRGRQLGSSARFIYDACGARLFVQRFCLQYGLEGHGGCVNTLHFNQRGAWLASGSDDLKVVVWDWVRRRPVLEFESGHKSNVFQAKFLPNSGDSTLAMCARDGQVRIAELSATQCCKTTKRVAQHKGASHKLALEPDSPCTFLSAGEDAVVFTIDLRQDRPASKLVVTKEKEKKVGLYTIYVNPANTHQFAVGGRDEYVRIYDQRKINENENNGVLKKFCPHHLVNSESKANITCLVYSHNGSELLASYNDEDIYLFNSSHSDGAEYIKRYKGHRNNATVKGVNFYGPKSEFVVSGSDCGHIFLWEKASCQVVQFMPGDKGGVVNCLEPHPHLPVLATSGLDYDVKIWAPTAEMPTQLTGLKEVIKKNKRERDEDSLNHADMYESHLLWFLMHHFRPRRRHRRQRDAGTGVADSDSEESLSSSDTLDEEEEGPDRVQCMPS
SIO_010081: DCAF8
subclass of: SO_0000673
so part of: DCAF8
location: complement(join(1185069..1185188,1185315..1185431,1185527..1185646,1185799..1185929,1186315..1186422,1186553..1186610,1186856..1186928,1187182..1187292,1187370..1187464,1187827..1187967,1188221..1188921,1189211..1189263,1192793..1192872,1193095..1193139,1193212..1193388,1193558..1193722,1193837..1193922,1194027..1194192,1194285..1194400,1194489..1194540))
location: region:1185069-1194540:-1
so has part: feature:1194489-1194540:-1:exon
so has part: feature:1194285-1194400:-1:exon
so has part: feature:1194027-1194192:-1:exon
so has part: feature:1193837-1193922:-1:exon
so has part: feature:1193558-1193722:-1:exon
so has part: feature:1193212-1193388:-1:exon
so has part: feature:1193095-1193139:-1:exon
so has part: feature:1192793-1192872:-1:exon
so has part: feature:1189211-1189263:-1:exon
so has part: feature:1188221-1188921:-1:exon
so has part: feature:1187827-1187967:-1:exon
so has part: feature:1187370-1187464:-1:exon
so has part: feature:1187182-1187292:-1:exon
so has part: feature:1186856-1186928:-1:exon
so has part: feature:1186553-1186610:-1:exon
so has part: feature:1186315-1186422:-1:exon
so has part: feature:1185799-1185929:-1:exon
so has part: feature:1185527-1185646:-1:exon
so has part: feature:1185315-1185431:-1:exon
so has part: feature:1185069-1185188:-1:exon

XP_032090141.1
type: Protein
SIO_000068: ncbiprotein

position:1185069:-1
position: 1185069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1194540:-1
position: 1194540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1194489-1194540:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1194285-1194400:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1194027-1194192:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1193837-1193922:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1193558-1193722:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1193212-1193388:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1193095-1193139:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1192793-1192872:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1189211-1189263:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1188221-1188921:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1187827-1187967:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1187370-1187464:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1187182-1187292:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1186856-1186928:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1186553-1186610:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1186315-1186422:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1185799-1185929:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1185527-1185646:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1185315-1185431:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1185069-1185188:-1:exon

LOC116519844
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: LOC116519844
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1190628..1191299)
location: region:1190628-1191299:-1
so has part: feature:1190628-1191299:-1:exon
subclass of: SO_0000011

116519844
type: Gene
SIO_000068: ncbigene

position:1190628:-1
position: 1190628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1191299:-1
position: 1191299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1190628-1191299:-1:exon

LOC116519844
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 35005
nc RNA class: lncRNA
gene: LOC116519844
product: uncharacterized LOC116519844
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XR_004256690.1
SIO_010081: LOC116519844
subclass of: SO_0000673
so part of: LOC116519844
location: complement(join(1190628..1190705,1190986..1191299))
location: region:1190628-1191299:-1
so has part: feature:1190986-1191299:-1:exon
so has part: feature:1190628-1190705:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1190986-1191299:-1:exon

position:1190986:-1
position: 1190986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1190628-1190705:-1:exon

position:1190705:-1
position: 1190705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LRRC71
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: LRRC71
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1194713..1198429
location: region:1194713-1198429:1
so has part: feature:1194713-1198429:1:exon
subclass of: SO_0000010

116519821
type: Gene
SIO_000068: ncbigene

position:1194713:1
position: 1194713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1198429:1
position: 1198429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1194713-1198429:1:exon

LRRC71
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: LRRC71
product: leucine rich repeat containing 71, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_032233873.1
SIO_010081: LRRC71
subclass of: SO_0000673
so part of: LRRC71
location: join(1194713..1194844,1195376..1195651,1195742..1195817,1195909..1195983,1196070..1196138,1196343..1196703,1197031..1197141,1197255..1197366,1197459..1197547,1197753..1197864,1197938..1198053,1198165..1198429)
location: region:1194713-1198429:1
so has part: feature:1194713-1194844:1:exon
so has part: feature:1195376-1195651:1:exon
so has part: feature:1195742-1195817:1:exon
so has part: feature:1195909-1195983:1:exon
so has part: feature:1196070-1196138:1:exon
so has part: feature:1196343-1196703:1:exon
so has part: feature:1197031-1197141:1:exon
so has part: feature:1197255-1197366:1:exon
so has part: feature:1197459-1197547:1:exon
so has part: feature:1197753-1197864:1:exon
so has part: feature:1197938-1198053:1:exon
so has part: feature:1198165-1198429:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1194713-1194844:1:exon

position:1194844:1
position: 1194844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1195376-1195651:1:exon

position:1195376:1
position: 1195376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1195651:1
position: 1195651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1195742-1195817:1:exon

position:1195742:1
position: 1195742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1195817:1
position: 1195817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1195909-1195983:1:exon

position:1195909:1
position: 1195909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1195983:1
position: 1195983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1196070-1196138:1:exon

position:1196070:1
position: 1196070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1196138:1
position: 1196138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1196343-1196703:1:exon

position:1196343:1
position: 1196343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1196703:1
position: 1196703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1197031-1197141:1:exon

position:1197031:1
position: 1197031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1197141:1
position: 1197141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1197255-1197366:1:exon

position:1197255:1
position: 1197255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1197366:1
position: 1197366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1197459-1197547:1:exon

position:1197459:1
position: 1197459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1197547:1
position: 1197547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1197753-1197864:1:exon

position:1197753:1
position: 1197753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1197864:1
position: 1197864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1197938-1198053:1:exon

position:1197938:1
position: 1197938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1198053:1
position: 1198053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1198165-1198429:1:exon

position:1198165:1
position: 1198165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LRRC71
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: LRRC71
product: leucine rich repeat containing 71, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_032233872.1
SIO_010081: LRRC71
subclass of: SO_0000673
so part of: LRRC71
location: join(1194713..1194844,1195376..1195651,1195742..1195817,1195909..1195983,1196070..1196138,1196343..1196703,1196783..1196872,1197031..1197141,1197255..1197366,1197459..1197547,1197753..1197864,1197938..1198053,1198165..1198428)
location: region:1194713-1198428:1
so has part: feature:1194713-1194844:1:exon
so has part: feature:1195376-1195651:1:exon
so has part: feature:1195742-1195817:1:exon
so has part: feature:1195909-1195983:1:exon
so has part: feature:1196070-1196138:1:exon
so has part: feature:1196343-1196703:1:exon
so has part: feature:1196783-1196872:1:exon
so has part: feature:1197031-1197141:1:exon
so has part: feature:1197255-1197366:1:exon
so has part: feature:1197459-1197547:1:exon
so has part: feature:1197753-1197864:1:exon
so has part: feature:1197938-1198053:1:exon
so has part: feature:1198165-1198428:1:exon

position:1198428:1
position: 1198428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1194713-1194844:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1195376-1195651:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1195742-1195817:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1195909-1195983:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1196070-1196138:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1196343-1196703:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1196783-1196872:1:exon

position:1196783:1
position: 1196783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1196872:1
position: 1196872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1197031-1197141:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1197255-1197366:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1197459-1197547:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1197753-1197864:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1197938-1198053:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1198165-1198428:1:exon

LRRC71
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: LRRC71
product: leucine rich repeat containing 71, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_032233874.1
SIO_010081: LRRC71
subclass of: SO_0000673
so part of: LRRC71
location: join(1194713..1194844,1195376..1195651,1195742..1195817,1195909..1195983,1196070..1196138,1196343..1196502,1196620..1196703,1196783..1196872,1197031..1197141,1197255..1197366,1197459..1197547,1197753..1197864,1197938..1198053,1198165..1198426)
location: region:1194713-1198426:1
so has part: feature:1194713-1194844:1:exon
so has part: feature:1195376-1195651:1:exon
so has part: feature:1195742-1195817:1:exon
so has part: feature:1195909-1195983:1:exon
so has part: feature:1196070-1196138:1:exon
so has part: feature:1196343-1196502:1:exon
so has part: feature:1196620-1196703:1:exon
so has part: feature:1196783-1196872:1:exon
so has part: feature:1197031-1197141:1:exon
so has part: feature:1197255-1197366:1:exon
so has part: feature:1197459-1197547:1:exon
so has part: feature:1197753-1197864:1:exon
so has part: feature:1197938-1198053:1:exon
so has part: feature:1198165-1198426:1:exon

position:1198426:1
position: 1198426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1194713-1194844:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1195376-1195651:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1195742-1195817:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1195909-1195983:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1196070-1196138:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1196343-1196502:1:exon

position:1196502:1
position: 1196502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1196620-1196703:1:exon

position:1196620:1
position: 1196620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1196783-1196872:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1197031-1197141:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1197255-1197366:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1197459-1197547:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1197753-1197864:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1197938-1198053:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1198165-1198426:1:exon

LRRC71
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: LRRC71
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 71 isoform X1
translation: MGKKGERGAKDKSAAQEEEARLAARRAEHGEEEYVCSGALDLDFPELCARAGLQEAPRVVSRPHPPAGAPLEEAEAAGVPAGEQREALPALAQIQAKYAYFRPCVQVELEHEDPKSAREVFIRSWKIEEKMLGVLGKCLPALAHLQALHLWKVGLTDATFLALLPVLAACVNLKTFVLEGNPLPERSFFKLVSEESSLAHLSLRNNCMDDQAVLLIGQALSSLRSSNKNLVSINLSYNHITDVGATHLANVRPLGTVSRALLGRLPSPLMGGGGSCPLSPASGAPSSMQGLRLNRSLLSLSLAHNQIGDEGALKLAEVLGPFALTHTEVVERRRLLLEKEAQERGRLPPRHSDPKSDRPTSHVSSTAIDKLQGAKGAKSMVKKKELTKKEEKGPVGGAAPAQPPAAPAAQAKKEDAKQSKKAVPPVDPKAKGAKGVKLGSKDKRSQVLEVEQILEPTEMLNPLLEQAEHRDGQVFLHGNRVLIYLNLMRNHISENGLKGFLATVEYQASRILPGAKGPTGLLRLSLAKNTFPAESKTYSRIQELMGPRDPLPRARTEEEQLAAAL
SIO_010081: LRRC71
subclass of: SO_0000673
so part of: LRRC71
location: join(1194751..1194844,1195376..1195651,1195742..1195817,1195909..1195983,1196070..1196138,1196343..1196703,1196783..1196872,1197031..1197141,1197255..1197366,1197459..1197547,1197753..1197864,1197938..1198053,1198165..1198281)
location: region:1194751-1198281:1
so has part: feature:1194751-1194844:1:exon
so has part: feature:1195376-1195651:1:exon
so has part: feature:1195742-1195817:1:exon
so has part: feature:1195909-1195983:1:exon
so has part: feature:1196070-1196138:1:exon
so has part: feature:1196343-1196703:1:exon
so has part: feature:1196783-1196872:1:exon
so has part: feature:1197031-1197141:1:exon
so has part: feature:1197255-1197366:1:exon
so has part: feature:1197459-1197547:1:exon
so has part: feature:1197753-1197864:1:exon
so has part: feature:1197938-1198053:1:exon
so has part: feature:1198165-1198281:1:exon

XP_032089763.1
type: Protein
SIO_000068: ncbiprotein

position:1194751:1
position: 1194751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1198281:1
position: 1198281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1194751-1194844:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1195376-1195651:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1195742-1195817:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1195909-1195983:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1196070-1196138:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1196343-1196703:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1196783-1196872:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1197031-1197141:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1197255-1197366:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1197459-1197547:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1197753-1197864:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1197938-1198053:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1198165-1198281:1:exon

LRRC71
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: LRRC71
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 71 isoform X2
translation: MGKKGERGAKDKSAAQEEEARLAARRAEHGEEEYVCSGALDLDFPELCARAGLQEAPRVVSRPHPPAGAPLEEAEAAGVPAGEQREALPALAQIQAKYAYFRPCVQVELEHEDPKSAREVFIRSWKIEEKMLGVLGKCLPALAHLQALHLWKVGLTDATFLALLPVLAACVNLKTFVLEGNPLPERSFFKLVSEESSLAHLSLRNNCMDDQAVLLIGQALSSLRSSNKNLVSINLSYNHITDVGATHLANVRPLGTVSRALLGRLPSPLMGGGGSCPLSPASGAPSSMQGLRLNRSLLSLSLAHNQIGDEGALKLAEPPRHSDPKSDRPTSHVSSTAIDKLQGAKGAKSMVKKKELTKKEEKGPVGGAAPAQPPAAPAAQAKKEDAKQSKKAVPPVDPKAKGAKGVKLGSKDKRSQVLEVEQILEPTEMLNPLLEQAEHRDGQVFLHGNRVLIYLNLMRNHISENGLKGFLATVEYQASRILPGAKGPTGLLRLSLAKNTFPAESKTYSRIQELMGPRDPLPRARTEEEQLAAAL
SIO_010081: LRRC71
subclass of: SO_0000673
so part of: LRRC71
location: join(1194751..1194844,1195376..1195651,1195742..1195817,1195909..1195983,1196070..1196138,1196343..1196703,1197031..1197141,1197255..1197366,1197459..1197547,1197753..1197864,1197938..1198053,1198165..1198281)
location: region:1194751-1198281:1
so has part: feature:1194751-1194844:1:exon
so has part: feature:1195376-1195651:1:exon
so has part: feature:1195742-1195817:1:exon
so has part: feature:1195909-1195983:1:exon
so has part: feature:1196070-1196138:1:exon
so has part: feature:1196343-1196703:1:exon
so has part: feature:1197031-1197141:1:exon
so has part: feature:1197255-1197366:1:exon
so has part: feature:1197459-1197547:1:exon
so has part: feature:1197753-1197864:1:exon
so has part: feature:1197938-1198053:1:exon
so has part: feature:1198165-1198281:1:exon

XP_032089764.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1194751-1194844:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1195376-1195651:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1195742-1195817:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1195909-1195983:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1196070-1196138:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1196343-1196703:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1197031-1197141:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1197255-1197366:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1197459-1197547:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1197753-1197864:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1197938-1198053:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1198165-1198281:1:exon

LRRC71
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: LRRC71
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 71 isoform X3
translation: MGKKGERGAKDKSAAQEEEARLAARRAEHGEEEYVCSGALDLDFPELCARAGLQEAPRVVSRPHPPAGAPLEEAEAAGVPAGEQREALPALAQIQAKYAYFRPCVQVELEHEDPKSAREVFIRSWKIEEKMLGVLGKCLPALAHLQALHLWKVGLTDATFLALLPVLAACVNLKTFVLEGNPLPERSFFKLVSEESSLAHLSLRNNCMDDQAVLLIGQALSSLRSSNKNLVSINLSYNHITDVGATHLANGLRLNRSLLSLSLAHNQIGDEGALKLAEVLGPFALTHTEVVERRRLLLEKEAQERGRLPPRHSDPKSDRPTSHVSSTAIDKLQGAKGAKSMVKKKELTKKEEKGPVGGAAPAQPPAAPAAQAKKEDAKQSKKAVPPVDPKAKGAKGVKLGSKDKRSQVLEVEQILEPTEMLNPLLEQAEHRDGQVFLHGNRVLIYLNLMRNHISENGLKGFLATVEYQASRILPGAKGPTGLLRLSLAKNTFPAESKTYSRIQELMGPRDPLPRARTEEEQLAAAL
SIO_010081: LRRC71
subclass of: SO_0000673
so part of: LRRC71
location: join(1194751..1194844,1195376..1195651,1195742..1195817,1195909..1195983,1196070..1196138,1196343..1196502,1196620..1196703,1196783..1196872,1197031..1197141,1197255..1197366,1197459..1197547,1197753..1197864,1197938..1198053,1198165..1198281)
location: region:1194751-1198281:1
so has part: feature:1194751-1194844:1:exon
so has part: feature:1195376-1195651:1:exon
so has part: feature:1195742-1195817:1:exon
so has part: feature:1195909-1195983:1:exon
so has part: feature:1196070-1196138:1:exon
so has part: feature:1196343-1196502:1:exon
so has part: feature:1196620-1196703:1:exon
so has part: feature:1196783-1196872:1:exon
so has part: feature:1197031-1197141:1:exon
so has part: feature:1197255-1197366:1:exon
so has part: feature:1197459-1197547:1:exon
so has part: feature:1197753-1197864:1:exon
so has part: feature:1197938-1198053:1:exon
so has part: feature:1198165-1198281:1:exon

XP_032089765.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1194751-1194844:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1195376-1195651:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1195742-1195817:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1195909-1195983:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1196070-1196138:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1196343-1196502:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1196620-1196703:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1196783-1196872:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1197031-1197141:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1197255-1197366:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1197459-1197547:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1197753-1197864:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1197938-1198053:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1198165-1198281:1:exon

ARHGEF11
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: ARHGEF11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1198962..1217505)
location: region:1198962-1217505:-1
so has part: feature:1198962-1217505:-1:exon
subclass of: SO_0000010

116519809
type: Gene
SIO_000068: ncbigene

position:1198962:-1
position: 1198962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1217505:-1
position: 1217505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1198962-1217505:-1:exon

ARHGEF11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: ARHGEF11
product: Rho guanine nucleotide exchange factor 11, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_032233854.1
SIO_010081: ARHGEF11
subclass of: SO_0000673
so part of: ARHGEF11
location: complement(join(1198962..1199605,1199682..1199880,1199985..1200124,1201157..1201486,1201601..1201774,1201925..1202019,1202135..1202242,1202413..1202500,1202633..1202800,1202881..1202956,1203042..1203220,1203740..1203857,1204040..1204165,1204266..1204345,1204641..1204787,1204955..1205142,1205375..1205422,1205623..1205802,1205982..1206102,1206544..1206573,1206747..1206843,1206925..1207060,1207523..1207543,1207908..1208030,1208207..1208303,1208460..1208502,1208670..1208768,1208854..1208955,1209265..1209339,1209471..1209608,1209698..1209774,1209936..1209990,1210110..1210229,1210492..1210563,1210658..1210821,1211021..1211078,1211461..1211510,1211766..1211864,1212185..1212276,1217258..1217505))
location: region:1198962-1217505:-1
so has part: feature:1217258-1217505:-1:exon
so has part: feature:1212185-1212276:-1:exon
so has part: feature:1211766-1211864:-1:exon
so has part: feature:1211461-1211510:-1:exon
so has part: feature:1211021-1211078:-1:exon
so has part: feature:1210658-1210821:-1:exon
so has part: feature:1210492-1210563:-1:exon
so has part: feature:1210110-1210229:-1:exon
so has part: feature:1209936-1209990:-1:exon
so has part: feature:1209698-1209774:-1:exon
so has part: feature:1209471-1209608:-1:exon
so has part: feature:1209265-1209339:-1:exon
so has part: feature:1208854-1208955:-1:exon
so has part: feature:1208670-1208768:-1:exon
so has part: feature:1208460-1208502:-1:exon
so has part: feature:1208207-1208303:-1:exon
so has part: feature:1207908-1208030:-1:exon
so has part: feature:1207523-1207543:-1:exon
so has part: feature:1206925-1207060:-1:exon
so has part: feature:1206747-1206843:-1:exon
so has part: feature:1206544-1206573:-1:exon
so has part: feature:1205982-1206102:-1:exon
so has part: feature:1205623-1205802:-1:exon
so has part: feature:1205375-1205422:-1:exon
so has part: feature:1204955-1205142:-1:exon
so has part: feature:1204641-1204787:-1:exon
so has part: feature:1204266-1204345:-1:exon
so has part: feature:1204040-1204165:-1:exon
so has part: feature:1203740-1203857:-1:exon
so has part: feature:1203042-1203220:-1:exon
so has part: feature:1202881-1202956:-1:exon
so has part: feature:1202633-1202800:-1:exon
so has part: feature:1202413-1202500:-1:exon
so has part: feature:1202135-1202242:-1:exon
so has part: feature:1201925-1202019:-1:exon
so has part: feature:1201601-1201774:-1:exon
so has part: feature:1201157-1201486:-1:exon
so has part: feature:1199985-1200124:-1:exon
so has part: feature:1199682-1199880:-1:exon
so has part: feature:1198962-1199605:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1217258-1217505:-1:exon

position:1217258:-1
position: 1217258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1212185-1212276:-1:exon

position:1212185:-1
position: 1212185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1212276:-1
position: 1212276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1211766-1211864:-1:exon

position:1211766:-1
position: 1211766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1211864:-1
position: 1211864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1211461-1211510:-1:exon

position:1211461:-1
position: 1211461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1211510:-1
position: 1211510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1211021-1211078:-1:exon

position:1211021:-1
position: 1211021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1211078:-1
position: 1211078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1210658-1210821:-1:exon

position:1210658:-1
position: 1210658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1210821:-1
position: 1210821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1210492-1210563:-1:exon

position:1210492:-1
position: 1210492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1210563:-1
position: 1210563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1210110-1210229:-1:exon

position:1210110:-1
position: 1210110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1210229:-1
position: 1210229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1209936-1209990:-1:exon

position:1209936:-1
position: 1209936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1209990:-1
position: 1209990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1209698-1209774:-1:exon

position:1209698:-1
position: 1209698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1209774:-1
position: 1209774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1209471-1209608:-1:exon

position:1209471:-1
position: 1209471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1209608:-1
position: 1209608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1209265-1209339:-1:exon

position:1209265:-1
position: 1209265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1209339:-1
position: 1209339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1208854-1208955:-1:exon

position:1208854:-1
position: 1208854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1208955:-1
position: 1208955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1208670-1208768:-1:exon

position:1208670:-1
position: 1208670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1208768:-1
position: 1208768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1208460-1208502:-1:exon

position:1208460:-1
position: 1208460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1208502:-1
position: 1208502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1208207-1208303:-1:exon

position:1208207:-1
position: 1208207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1208303:-1
position: 1208303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1207908-1208030:-1:exon

position:1207908:-1
position: 1207908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1208030:-1
position: 1208030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1207523-1207543:-1:exon

position:1207523:-1
position: 1207523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1207543:-1
position: 1207543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1206925-1207060:-1:exon

position:1206925:-1
position: 1206925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1207060:-1
position: 1207060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1206747-1206843:-1:exon

position:1206747:-1
position: 1206747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1206843:-1
position: 1206843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1206544-1206573:-1:exon

position:1206544:-1
position: 1206544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1206573:-1
position: 1206573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1205982-1206102:-1:exon

position:1205982:-1
position: 1205982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1206102:-1
position: 1206102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1205623-1205802:-1:exon

position:1205623:-1
position: 1205623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1205802:-1
position: 1205802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1205375-1205422:-1:exon

position:1205375:-1
position: 1205375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1205422:-1
position: 1205422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1204955-1205142:-1:exon

position:1204955:-1
position: 1204955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1205142:-1
position: 1205142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1204641-1204787:-1:exon

position:1204641:-1
position: 1204641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1204787:-1
position: 1204787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1204266-1204345:-1:exon

position:1204266:-1
position: 1204266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1204345:-1
position: 1204345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1204040-1204165:-1:exon

position:1204040:-1
position: 1204040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1204165:-1
position: 1204165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1203740-1203857:-1:exon

position:1203740:-1
position: 1203740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1203857:-1
position: 1203857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1203042-1203220:-1:exon

position:1203042:-1
position: 1203042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1203220:-1
position: 1203220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1202881-1202956:-1:exon

position:1202881:-1
position: 1202881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1202956:-1
position: 1202956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1202633-1202800:-1:exon

position:1202633:-1
position: 1202633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1202800:-1
position: 1202800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1202413-1202500:-1:exon

position:1202413:-1
position: 1202413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1202500:-1
position: 1202500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1202135-1202242:-1:exon

position:1202135:-1
position: 1202135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1202242:-1
position: 1202242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:1201925-1202019:-1:exon

position:1201925:-1
position: 1201925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1202019:-1
position: 1202019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:1201601-1201774:-1:exon

position:1201601:-1
position: 1201601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1201774:-1
position: 1201774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:1201157-1201486:-1:exon

position:1201157:-1
position: 1201157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1201486:-1
position: 1201486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:1199985-1200124:-1:exon

position:1199985:-1
position: 1199985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1200124:-1
position: 1200124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:1199682-1199880:-1:exon

position:1199682:-1
position: 1199682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1199880:-1
position: 1199880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:1198962-1199605:-1:exon

position:1199605:-1
position: 1199605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARHGEF11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: ARHGEF11
product: Rho guanine nucleotide exchange factor 11, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_032233852.1
SIO_010081: ARHGEF11
subclass of: SO_0000673
so part of: ARHGEF11
location: complement(join(1198962..1199605,1199682..1199880,1199985..1200235,1201157..1201486,1201601..1201774,1201925..1202019,1202135..1202242,1202413..1202500,1202633..1202800,1202881..1202956,1203042..1203220,1203740..1203857,1204040..1204165,1204266..1204345,1204641..1204787,1204955..1205142,1205375..1205422,1205623..1205802,1205982..1206102,1206544..1206573,1206747..1206843,1206925..1207060,1207523..1207543,1207908..1208030,1208207..1208303,1208460..1208502,1208670..1208768,1208854..1208955,1209265..1209339,1209471..1209608,1209698..1209774,1209936..1209990,1210110..1210229,1210492..1210563,1210658..1210821,1211021..1211078,1211461..1211510,1211766..1211864,1212185..1212276,1217258..1217505))
location: region:1198962-1217505:-1
so has part: feature:1217258-1217505:-1:exon
so has part: feature:1212185-1212276:-1:exon
so has part: feature:1211766-1211864:-1:exon
so has part: feature:1211461-1211510:-1:exon
so has part: feature:1211021-1211078:-1:exon
so has part: feature:1210658-1210821:-1:exon
so has part: feature:1210492-1210563:-1:exon
so has part: feature:1210110-1210229:-1:exon
so has part: feature:1209936-1209990:-1:exon
so has part: feature:1209698-1209774:-1:exon
so has part: feature:1209471-1209608:-1:exon
so has part: feature:1209265-1209339:-1:exon
so has part: feature:1208854-1208955:-1:exon
so has part: feature:1208670-1208768:-1:exon
so has part: feature:1208460-1208502:-1:exon
so has part: feature:1208207-1208303:-1:exon
so has part: feature:1207908-1208030:-1:exon
so has part: feature:1207523-1207543:-1:exon
so has part: feature:1206925-1207060:-1:exon
so has part: feature:1206747-1206843:-1:exon
so has part: feature:1206544-1206573:-1:exon
so has part: feature:1205982-1206102:-1:exon
so has part: feature:1205623-1205802:-1:exon
so has part: feature:1205375-1205422:-1:exon
so has part: feature:1204955-1205142:-1:exon
so has part: feature:1204641-1204787:-1:exon
so has part: feature:1204266-1204345:-1:exon
so has part: feature:1204040-1204165:-1:exon
so has part: feature:1203740-1203857:-1:exon
so has part: feature:1203042-1203220:-1:exon
so has part: feature:1202881-1202956:-1:exon
so has part: feature:1202633-1202800:-1:exon
so has part: feature:1202413-1202500:-1:exon
so has part: feature:1202135-1202242:-1:exon
so has part: feature:1201925-1202019:-1:exon
so has part: feature:1201601-1201774:-1:exon
so has part: feature:1201157-1201486:-1:exon
so has part: feature:1199985-1200235:-1:exon
so has part: feature:1199682-1199880:-1:exon
so has part: feature:1198962-1199605:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1217258-1217505:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1212185-1212276:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1211766-1211864:-1:exon

urn:…
SIO_000300: 4
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urn:…
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ARHGEF11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: ARHGEF11
product: Rho guanine nucleotide exchange factor 11, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_032233853.1
SIO_010081: ARHGEF11
subclass of: SO_0000673
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ARHGEF11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: ARHGEF11
product: Rho guanine nucleotide exchange factor 11, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_032233850.1
SIO_010081: ARHGEF11
subclass of: SO_0000673
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ARHGEF11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: ARHGEF11
product: Rho guanine nucleotide exchange factor 11, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_032233855.1
SIO_010081: ARHGEF11
subclass of: SO_0000673
so part of: ARHGEF11
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so has part: feature:1198962-1199605:-1:exon

position:1211044:-1
position: 1211044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1211021-1211044:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1210492-1210563:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1210110-1210229:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1209936-1209990:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1209698-1209774:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1209471-1209608:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1209265-1209339:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1208854-1208955:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1208670-1208768:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1208460-1208502:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1208207-1208303:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1207908-1208030:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1207523-1207543:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1206925-1207060:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1206747-1206843:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1206544-1206573:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1205982-1206102:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1205623-1205802:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1205375-1205422:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1204955-1205142:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1204641-1204787:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1204266-1204345:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1204040-1204165:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1203740-1203857:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1203042-1203220:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1202881-1202956:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1202633-1202800:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1202413-1202500:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1202135-1202242:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1201925-1202019:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1201601-1201774:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1201157-1201486:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1200749-1200820:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1199985-1200235:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1199682-1199880:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1198962-1199605:-1:exon

ARHGEF11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: ARHGEF11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 11 isoform X4
translation: MNMRPPALDRLGSLSSLGDSAVERHSPSHHRQPSDSGETTGLVQRCVIIQKDEHGFGFTVSGDRIVLVQSVRPGGAAMKAGVQEGDRIVKVNGMVVTNTSHLEVVKLIRSGAYVALTLLGSPPSSLGFLGSQHDRPQAGTPHIACPPPLPPPPHRVTAGPKPPQDPEVQKHATQILRKMLQQEEADLQRCYEIYSQNPASLLEEQIEGARRRVAQLQHKIRQEMGELVDGPRWPSDPGSFSARGTEGGLSIDSQDGDSGLDSGTERFSSVSEISLNRNSVLSDPGLGSPHTSPVASSRLFMHHRRQGSDTPFLHSTEQSLDHILRTSIIGPEEDYDPGYLDNENDSLFQDLGKLKTRPAHLGVFLRYIFSQADPSPLLLYLCVDVSQQMSPKEARALSKDIWHIFLDKAAPLRVTVPDQLLAEIEAQLRNGEDVQAAFLEVQEAVMPEIQEQIQDYRTKRTMGLGSLYGENDLLELDGELQKERQVAEKQMAQLWDILSKYEDRSSPMGFALKTYMIHVGICPRESRPASVVEKSQEKDKWLPFFPKAKKSSSSSKKEAAVEDKKRNPILKYIAKPKSASQSTFHVPLSPVEVKPGSVRTIIQHFENSQECQEAALQRLSTGSFPEDLLDSDGSRAEVRLGRSESLKGREELRRLRKAENVPRSRSDVDMDAAAEAARLHQSTSSSASSISTRSLENPTPPYTPKMGRRSIESPSLGFSSEAFLPHLLEDELGQFPDLEMELDSQNWQHTVGREAAAQLPQQEVDRQEVINELFVTESSHLRTLRVLDLLFYQRLRREGQLSREELALLFPNLPELIEIHNSLSESMKKLREEGPVVKEVGDLMLSRFDGAALEEFQQVAAEFCAYQSMALELIRTKKRKETRFQQFMQEAESHPQCRRLQLKDLLISEMQRLTKYPLLLDSLIKHSSGQPEDHRKLCRARDQCREALRYVNEAVKQAENQQRLESYQKRLDATSLERTSNPIAAEFKNLDLRGRRMIHEGPLLWRISKDKTLDLQVLLLGDLLVLLQRQDERLVLKCHSRTVLGSCDPKQTFSPVLRLGSVLIRSVATDKRALFIICTSELGPQIYELVASTSLEKNTWMELLEEAVKSATQAAPLPPQPHARQLCPHQPAPTSFIFPDAEMAPRLDRESSPPSCEAENEEGGASDHTPTEASAAERLEGGHPEEEEEEEGNPPTAPVLPLLEEVPPQRPPCLESMAESALGDVETLRRLLLHSFLPCQDSEPEDDLTPTPSGAGRNRHWGWASQEEPSEGPQAPLLPGPPEPDGQGCVSGPPSSGPTSHPGPGEGLEEVGAPAVQADNQQPETPSCYLVVRKGCQERPRETLARWPSPAELPAPSQGTWEAEAVFRTIEQLTLKLTKLKDVEGAYQQLLFRQPPPKGHCTAEGTPGQGSASLPEPSRMLPNTHRGSSISHPSLPSSPQSPVAAKPDVNGLSLALPEDGSQEVSL
SIO_010081: ARHGEF11
subclass of: SO_0000673
so part of: ARHGEF11
location: complement(join(1199547..1199605,1199682..1199880,1199985..1200124,1201157..1201486,1201601..1201774,1201925..1202019,1202135..1202242,1202413..1202500,1202633..1202800,1202881..1202956,1203042..1203220,1203740..1203857,1204040..1204165,1204266..1204345,1204641..1204787,1204955..1205142,1205375..1205422,1205623..1205802,1205982..1206102,1206544..1206573,1206747..1206843,1206925..1207060,1207523..1207543,1207908..1208030,1208207..1208303,1208460..1208502,1208670..1208768,1208854..1208955,1209265..1209339,1209471..1209608,1209698..1209774,1209936..1209990,1210110..1210229,1210492..1210563,1210658..1210821,1211021..1211078,1211461..1211510,1211766..1211864,1212185..1212276,1217258..1217286))
location: region:1199547-1217286:-1
so has part: feature:1217258-1217286:-1:exon
so has part: feature:1212185-1212276:-1:exon
so has part: feature:1211766-1211864:-1:exon
so has part: feature:1211461-1211510:-1:exon
so has part: feature:1211021-1211078:-1:exon
so has part: feature:1210658-1210821:-1:exon
so has part: feature:1210492-1210563:-1:exon
so has part: feature:1210110-1210229:-1:exon
so has part: feature:1209936-1209990:-1:exon
so has part: feature:1209698-1209774:-1:exon
so has part: feature:1209471-1209608:-1:exon
so has part: feature:1209265-1209339:-1:exon
so has part: feature:1208854-1208955:-1:exon
so has part: feature:1208670-1208768:-1:exon
so has part: feature:1208460-1208502:-1:exon
so has part: feature:1208207-1208303:-1:exon
so has part: feature:1207908-1208030:-1:exon
so has part: feature:1207523-1207543:-1:exon
so has part: feature:1206925-1207060:-1:exon
so has part: feature:1206747-1206843:-1:exon
so has part: feature:1206544-1206573:-1:exon
so has part: feature:1205982-1206102:-1:exon
so has part: feature:1205623-1205802:-1:exon
so has part: feature:1205375-1205422:-1:exon
so has part: feature:1204955-1205142:-1:exon
so has part: feature:1204641-1204787:-1:exon
so has part: feature:1204266-1204345:-1:exon
so has part: feature:1204040-1204165:-1:exon
so has part: feature:1203740-1203857:-1:exon
so has part: feature:1203042-1203220:-1:exon
so has part: feature:1202881-1202956:-1:exon
so has part: feature:1202633-1202800:-1:exon
so has part: feature:1202413-1202500:-1:exon
so has part: feature:1202135-1202242:-1:exon
so has part: feature:1201925-1202019:-1:exon
so has part: feature:1201601-1201774:-1:exon
so has part: feature:1201157-1201486:-1:exon
so has part: feature:1199985-1200124:-1:exon
so has part: feature:1199682-1199880:-1:exon
so has part: feature:1199547-1199605:-1:exon

XP_032089745.1
type: Protein
SIO_000068: ncbiprotein

position:1199547:-1
position: 1199547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1217286:-1
position: 1217286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1217258-1217286:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1212185-1212276:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1211766-1211864:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1211461-1211510:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1211021-1211078:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1210658-1210821:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1210492-1210563:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1210110-1210229:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1209936-1209990:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1209698-1209774:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1209471-1209608:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1209265-1209339:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1208854-1208955:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1208670-1208768:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1208460-1208502:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1208207-1208303:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1207908-1208030:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1207523-1207543:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1206925-1207060:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1206747-1206843:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1206544-1206573:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1205982-1206102:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1205623-1205802:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1205375-1205422:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1204955-1205142:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1204641-1204787:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1204266-1204345:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1204040-1204165:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1203740-1203857:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1203042-1203220:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1202881-1202956:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1202633-1202800:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1202413-1202500:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1202135-1202242:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1201925-1202019:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1201601-1201774:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1201157-1201486:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1199985-1200124:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1199682-1199880:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1199547-1199605:-1:exon

ARHGEF11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: ARHGEF11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 11 isoform X2
translation: MNMRPPALDRLGSLSSLGDSAVERHSPSHHRQPSDSGETTGLVQRCVIIQKDEHGFGFTVSGDRIVLVQSVRPGGAAMKAGVQEGDRIVKVNGMVVTNTSHLEVVKLIRSGAYVALTLLGSPPSSLGFLGSQHDRPQAGTPHIACPPPLPPPPHRVTAGPKPPQDPEVQKHATQILRKMLQQEEADLQRCYEIYSQNPASLLEEQIEGARRRVAQLQHKIRQEMGELVDGPRWPSDPGSFSARGTEGGLSIDSQDGDSGLDSGTERFSSVSEISLNRNSVLSDPGLGSPHTSPVASSRLFMHHRRQGSDTPFLHSTEQSLDHILRTSIIGPEEDYDPGYLDNENDSLFQDLGKLKTRPAHLGVFLRYIFSQADPSPLLLYLCVDVSQQMSPKEARALSKDIWHIFLDKAAPLRVTVPDQLLAEIEAQLRNGEDVQAAFLEVQEAVMPEIQEQIQDYRTKRTMGLGSLYGENDLLELDGELQKERQVAEKQMAQLWDILSKYEDRSSPMGFALKTYMIHVGICPRESRPASVVEKSQEKDKWLPFFPKAKKSSSSSKKEAAVEDKKRNPILKYIAKPKSASQSTFHVPLSPVEVKPGSVRTIIQHFENSQECQEAALQRLSTGSFPEDLLDSDGSRAEVRLGRSESLKGREELRRLRKAENVPRSRSDVDMDAAAEAARLHQSTSSSASSISTRSLENPTPPYTPKMGRRSIESPSLGFSSEAFLPHLLEDELGQFPDLEMELDSQNWQHTVGREAAAQLPQQEVDRQEVINELFVTESSHLRTLRVLDLLFYQRLRREGQLSREELALLFPNLPELIEIHNSLSESMKKLREEGPVVKEVGDLMLSRFDGAALEEFQQVAAEFCAYQSMALELIRTKKRKETRFQQFMQEAESHPQCRRLQLKDLLISEMQRLTKYPLLLDSLIKHSSGQPEDHRKLCRARDQCREALRYVNEAVKQAENQQRLESYQKRLDATSLERTSNPIAAEFKNLDLRGRRMIHEGPLLWRISKDKTLDLQVLLLGDLLVLLQRQDERLVLKCHSRTVLGSCDPKQTFSPVLRLGSVLIRSVATDKRALFIICTSELGPQIYELVASTSLEKNTWMELLEEAVKSATQAAPLPPQPHARQLCPHQPAPTSFIFPDAEMAPRLDRESSPPSCEAENEEGGASDHTPTEASAAERLEGGHPEEEEEEEGNPPTAPVLPLLEEVPPQRPPCLESMAESALGDVETLRRLLLHSFLPCQDSEPEDDLTPTPSGAGRNRHWGWASQEEPSEGPQAPLLPGPPEPDGQGCVSGPPSSGPTSHPGPGEGLEEVGAPAVQADNQQPETPSCYLVVRKGNTFYLSLPADSKQPPAGAHSLGEAEGAFSRAPSLPAGCQERPRETLARWPSPAELPAPSQGTWEAEAVFRTIEQLTLKLTKLKDVEGAYQQLLFRQPPPKGHCTAEGTPGQGSASLPEPSRMLPNTHRGSSISHPSLPSSPQSPVAAKPDVNGLSLALPEDGSQEVSL
SIO_010081: ARHGEF11
subclass of: SO_0000673
so part of: ARHGEF11
location: complement(join(1199547..1199605,1199682..1199880,1199985..1200235,1201157..1201486,1201601..1201774,1201925..1202019,1202135..1202242,1202413..1202500,1202633..1202800,1202881..1202956,1203042..1203220,1203740..1203857,1204040..1204165,1204266..1204345,1204641..1204787,1204955..1205142,1205375..1205422,1205623..1205802,1205982..1206102,1206544..1206573,1206747..1206843,1206925..1207060,1207523..1207543,1207908..1208030,1208207..1208303,1208460..1208502,1208670..1208768,1208854..1208955,1209265..1209339,1209471..1209608,1209698..1209774,1209936..1209990,1210110..1210229,1210492..1210563,1210658..1210821,1211021..1211078,1211461..1211510,1211766..1211864,1212185..1212276,1217258..1217286))
location: region:1199547-1217286:-1
so has part: feature:1217258-1217286:-1:exon
so has part: feature:1212185-1212276:-1:exon
so has part: feature:1211766-1211864:-1:exon
so has part: feature:1211461-1211510:-1:exon
so has part: feature:1211021-1211078:-1:exon
so has part: feature:1210658-1210821:-1:exon
so has part: feature:1210492-1210563:-1:exon
so has part: feature:1210110-1210229:-1:exon
so has part: feature:1209936-1209990:-1:exon
so has part: feature:1209698-1209774:-1:exon
so has part: feature:1209471-1209608:-1:exon
so has part: feature:1209265-1209339:-1:exon
so has part: feature:1208854-1208955:-1:exon
so has part: feature:1208670-1208768:-1:exon
so has part: feature:1208460-1208502:-1:exon
so has part: feature:1208207-1208303:-1:exon
so has part: feature:1207908-1208030:-1:exon
so has part: feature:1207523-1207543:-1:exon
so has part: feature:1206925-1207060:-1:exon
so has part: feature:1206747-1206843:-1:exon
so has part: feature:1206544-1206573:-1:exon
so has part: feature:1205982-1206102:-1:exon
so has part: feature:1205623-1205802:-1:exon
so has part: feature:1205375-1205422:-1:exon
so has part: feature:1204955-1205142:-1:exon
so has part: feature:1204641-1204787:-1:exon
so has part: feature:1204266-1204345:-1:exon
so has part: feature:1204040-1204165:-1:exon
so has part: feature:1203740-1203857:-1:exon
so has part: feature:1203042-1203220:-1:exon
so has part: feature:1202881-1202956:-1:exon
so has part: feature:1202633-1202800:-1:exon
so has part: feature:1202413-1202500:-1:exon
so has part: feature:1202135-1202242:-1:exon
so has part: feature:1201925-1202019:-1:exon
so has part: feature:1201601-1201774:-1:exon
so has part: feature:1201157-1201486:-1:exon
so has part: feature:1199985-1200235:-1:exon
so has part: feature:1199682-1199880:-1:exon
so has part: feature:1199547-1199605:-1:exon

XP_032089743.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1217258-1217286:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1212185-1212276:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1211766-1211864:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1211461-1211510:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1211021-1211078:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1210658-1210821:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1210492-1210563:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1210110-1210229:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1209936-1209990:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1209698-1209774:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1209471-1209608:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1209265-1209339:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1208854-1208955:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1208670-1208768:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1208460-1208502:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1208207-1208303:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1207908-1208030:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1207523-1207543:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1206925-1207060:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1206747-1206843:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1206544-1206573:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1205982-1206102:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1205623-1205802:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1205375-1205422:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1204955-1205142:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1204641-1204787:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1204266-1204345:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1204040-1204165:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1203740-1203857:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1203042-1203220:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1202881-1202956:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1202633-1202800:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1202413-1202500:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1202135-1202242:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1201925-1202019:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1201601-1201774:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1201157-1201486:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1199985-1200235:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1199682-1199880:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1199547-1199605:-1:exon

ARHGEF11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: ARHGEF11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 11 isoform X3
translation: MNMRPPALDRLGSLSSLGDSAVERHSPSHHRQPSDSGETTGLVQRCVIIQKDEHGFGFTVSGDRIVLVQSVRPGGAAMKAGVQEGDRIVKVNGMVVTNTSHLEVVKLIRSGAYVALTLLGSPPSSLGFLGSQHDRPQAGTPHIACPPPLPPPPHRVTAGPKPPQDPEVQKHATQILRKMLQQEEADLQRCYEIYSQNPASLLEEQIEGARRRVAQLQHKIRQEMGELVDGPRWPSDPGSFSARGTEGGLSIDSQDGDSGLDSGTERFSSVSEISLNRNSVLSDPGLGSPHTSPVASSRLFMHHRRQGSDTPFLHSTEQSLDHILRTSIIGPEEDYDPGYLDNENDSLFQDLGKLKTRPAHLGVFLRYIFSQADPSPLLLYLCVDVSQQMSPKEARALSKDIWHIFLDKAAPLRVTVPDQLLAEIEAQLRNGEDVQAAFLEVQEAVMPEIQEQIQDYRTKRTMGLGSLYGENDLLELDGELQKERQVAEKQMAQLWDILSKYEDRSSPMGFALKTYMIHVGICPRESRPASVVEKSQEKDKWLPFFPKAKKSSSSSKKEAAVEDKKRNPILKYIAKPKSASQSTFHVPLSPVEVKPGSVRTIIQHFENSQECQEAALQRLSTGSFPEDLLDSDGSRAEVRLGRSESLKGREELRRLRKAENVPRSRSDVDMDAAAEAARLHQSTSSSASSISTRSLENPTPPYTPKMGRRSIESPSLGFSSEAFLPHLLEDELGQFPDLEMELDSQNWQHTVGREAAAQLPQQEVDRQEVINELFVTESSHLRTLRVLDLLFYQRLRREGQLSREELALLFPNLPELIEIHNSLSESMKKLREEGPVVKEVGDLMLSRFDGAALEEFQQVAAEFCAYQSMALELIRTKKRKETRFQQFMQEAESHPQCRRLQLKDLLISEMQRLTKYPLLLDSLIKHSSGQPEDHRKLCRARDQCREALRYVNEAVKQAENQQRLESYQKRLDATSLERTSNPIAAEFKNLDLRGRRMIHEGPLLWRISKDKTLDLQVLLLGDLLVLLQRQDERLVLKCHSRTVLGSCDPKQTFSPVLRLGSVLIRSVATDKRALFIICTSELGPQIYELVASTSLEKNTWMELLEEAVKSATQAAPLPPQPHARQLCPHQPAPTSFIFPDAEMAPRLDRESSPPSCEAENEEGGASDHTPTEASAAERLEGGHPEEEEEEEGNPPTAPVLPLLEEVPPQRPPCLESMAESALGDVETLRRLLLHSFLPCQDSEPEDDLTPTPSGAGRNRHWGWASQEEPSEGPQAPLLPGPPEPDGQGCVSGPPSSGPTSHPGPGEGLEEVGAPAVQADNQQPETPSCYLVVRKAEVEGSESAQLLMEKDTGAPPDTDGCQERPRETLARWPSPAELPAPSQGTWEAEAVFRTIEQLTLKLTKLKDVEGAYQQLLFRQPPPKGHCTAEGTPGQGSASLPEPSRMLPNTHRGSSISHPSLPSSPQSPVAAKPDVNGLSLALPEDGSQEVSL
SIO_010081: ARHGEF11
subclass of: SO_0000673
so part of: ARHGEF11
location: complement(join(1199547..1199605,1199682..1199880,1199985..1200124,1200749..1200820,1201157..1201486,1201601..1201774,1201925..1202019,1202135..1202242,1202413..1202500,1202633..1202800,1202881..1202956,1203042..1203220,1203740..1203857,1204040..1204165,1204266..1204345,1204641..1204787,1204955..1205142,1205375..1205422,1205623..1205802,1205982..1206102,1206544..1206573,1206747..1206843,1206925..1207060,1207523..1207543,1207908..1208030,1208207..1208303,1208460..1208502,1208670..1208768,1208854..1208955,1209265..1209339,1209471..1209608,1209698..1209774,1209936..1209990,1210110..1210229,1210492..1210563,1210658..1210821,1211021..1211078,1211461..1211510,1211766..1211864,1212185..1212276,1217258..1217286))
location: region:1199547-1217286:-1
so has part: feature:1217258-1217286:-1:exon
so has part: feature:1212185-1212276:-1:exon
so has part: feature:1211766-1211864:-1:exon
so has part: feature:1211461-1211510:-1:exon
so has part: feature:1211021-1211078:-1:exon
so has part: feature:1210658-1210821:-1:exon
so has part: feature:1210492-1210563:-1:exon
so has part: feature:1210110-1210229:-1:exon
so has part: feature:1209936-1209990:-1:exon
so has part: feature:1209698-1209774:-1:exon
so has part: feature:1209471-1209608:-1:exon
so has part: feature:1209265-1209339:-1:exon
so has part: feature:1208854-1208955:-1:exon
so has part: feature:1208670-1208768:-1:exon
so has part: feature:1208460-1208502:-1:exon
so has part: feature:1208207-1208303:-1:exon
so has part: feature:1207908-1208030:-1:exon
so has part: feature:1207523-1207543:-1:exon
so has part: feature:1206925-1207060:-1:exon
so has part: feature:1206747-1206843:-1:exon
so has part: feature:1206544-1206573:-1:exon
so has part: feature:1205982-1206102:-1:exon
so has part: feature:1205623-1205802:-1:exon
so has part: feature:1205375-1205422:-1:exon
so has part: feature:1204955-1205142:-1:exon
so has part: feature:1204641-1204787:-1:exon
so has part: feature:1204266-1204345:-1:exon
so has part: feature:1204040-1204165:-1:exon
so has part: feature:1203740-1203857:-1:exon
so has part: feature:1203042-1203220:-1:exon
so has part: feature:1202881-1202956:-1:exon
so has part: feature:1202633-1202800:-1:exon
so has part: feature:1202413-1202500:-1:exon
so has part: feature:1202135-1202242:-1:exon
so has part: feature:1201925-1202019:-1:exon
so has part: feature:1201601-1201774:-1:exon
so has part: feature:1201157-1201486:-1:exon
so has part: feature:1200749-1200820:-1:exon
so has part: feature:1199985-1200124:-1:exon
so has part: feature:1199682-1199880:-1:exon
so has part: feature:1199547-1199605:-1:exon

XP_032089744.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1217258-1217286:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1212185-1212276:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1211766-1211864:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1211461-1211510:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1211021-1211078:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1210658-1210821:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1210492-1210563:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1210110-1210229:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1209936-1209990:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1209698-1209774:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1209471-1209608:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1209265-1209339:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1208854-1208955:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1208670-1208768:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1208460-1208502:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1208207-1208303:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1207908-1208030:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1207523-1207543:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1206925-1207060:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1206747-1206843:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1206544-1206573:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1205982-1206102:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1205623-1205802:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1205375-1205422:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1204955-1205142:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1204641-1204787:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1204266-1204345:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1204040-1204165:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1203740-1203857:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1203042-1203220:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1202881-1202956:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1202633-1202800:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1202413-1202500:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1202135-1202242:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1201925-1202019:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1201601-1201774:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1201157-1201486:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1200749-1200820:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1199985-1200124:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1199682-1199880:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1199547-1199605:-1:exon

ARHGEF11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: ARHGEF11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 11 isoform X1
translation: MNMRPPALDRLGSLSSLGDSAVERHSPSHHRQPSDSGETTGLVQRCVIIQKDEHGFGFTVSGDRIVLVQSVRPGGAAMKAGVQEGDRIVKVNGMVVTNTSHLEVVKLIRSGAYVALTLLGSPPSSLGFLGSQHDRPQAGTPHIACPPPLPPPPHRVTAGPKPPQDPEVQKHATQILRKMLQQEEADLQRCYEIYSQNPASLLEEQIEGARRRVAQLQHKIRQEMGELVDGPRWPSDPGSFSARGTEGGLSIDSQDGDSGLDSGTERFSSVSEISLNRNSVLSDPGLGSPHTSPVASSRLFMHHRRQGSDTPFLHSTEQSLDHILRTSIIGPEEDYDPGYLDNENDSLFQDLGKLKTRPAHLGVFLRYIFSQADPSPLLLYLCVDVSQQMSPKEARALSKDIWHIFLDKAAPLRVTVPDQLLAEIEAQLRNGEDVQAAFLEVQEAVMPEIQEQIQDYRTKRTMGLGSLYGENDLLELDGELQKERQVAEKQMAQLWDILSKYEDRSSPMGFALKTYMIHVGICPRESRPASVVEKSQEKDKWLPFFPKAKKSSSSSKKEAAVEDKKRNPILKYIAKPKSASQSTFHVPLSPVEVKPGSVRTIIQHFENSQECQEAALQRLSTGSFPEDLLDSDGSRAEVRLGRSESLKGREELRRLRKAENVPRSRSDVDMDAAAEAARLHQSTSSSASSISTRSLENPTPPYTPKMGRRSIESPSLGFSSEAFLPHLLEDELGQFPDLEMELDSQNWQHTVGREAAAQLPQQEVDRQEVINELFVTESSHLRTLRVLDLLFYQRLRREGQLSREELALLFPNLPELIEIHNSLSESMKKLREEGPVVKEVGDLMLSRFDGAALEEFQQVAAEFCAYQSMALELIRTKKRKETRFQQFMQEAESHPQCRRLQLKDLLISEMQRLTKYPLLLDSLIKHSSGQPEDHRKLCRARDQCREALRYVNEAVKQAENQQRLESYQKRLDATSLERTSNPIAAEFKNLDLRGRRMIHEGPLLWRISKDKTLDLQVLLLGDLLVLLQRQDERLVLKCHSRTVLGSCDPKQTFSPVLRLGSVLIRSVATDKRALFIICTSELGPQIYELVASTSLEKNTWMELLEEAVKSATQAAPLPPQPHARQLCPHQPAPTSFIFPDAEMAPRLDRESSPPSCEAENEEGGASDHTPTEASAAERLEGGHPEEEEEEEGNPPTAPVLPLLEEVPPQRPPCLESMAESALGDVETLRRLLLHSFLPCQDSEPEDDLTPTPSGAGRNRHWGWASQEEPSEGPQAPLLPGPPEPDGQGCVSGPPSSGPTSHPGPGEGLEEVGAPAVQADNQQPETPSCYLVVRKAEVEGSESAQLLMEKDTGAPPDTDGNTFYLSLPADSKQPPAGAHSLGEAEGAFSRAPSLPAGCQERPRETLARWPSPAELPAPSQGTWEAEAVFRTIEQLTLKLTKLKDVEGAYQQLLFRQPPPKGHCTAEGTPGQGSASLPEPSRMLPNTHRGSSISHPSLPSSPQSPVAAKPDVNGLSLALPEDGSQEVSL
SIO_010081: ARHGEF11
subclass of: SO_0000673
so part of: ARHGEF11
location: complement(join(1199547..1199605,1199682..1199880,1199985..1200235,1200749..1200820,1201157..1201486,1201601..1201774,1201925..1202019,1202135..1202242,1202413..1202500,1202633..1202800,1202881..1202956,1203042..1203220,1203740..1203857,1204040..1204165,1204266..1204345,1204641..1204787,1204955..1205142,1205375..1205422,1205623..1205802,1205982..1206102,1206544..1206573,1206747..1206843,1206925..1207060,1207523..1207543,1207908..1208030,1208207..1208303,1208460..1208502,1208670..1208768,1208854..1208955,1209265..1209339,1209471..1209608,1209698..1209774,1209936..1209990,1210110..1210229,1210492..1210563,1210658..1210821,1211021..1211078,1211461..1211510,1211766..1211864,1212185..1212276,1217258..1217286))
location: region:1199547-1217286:-1
so has part: feature:1217258-1217286:-1:exon
so has part: feature:1212185-1212276:-1:exon
so has part: feature:1211766-1211864:-1:exon
so has part: feature:1211461-1211510:-1:exon
so has part: feature:1211021-1211078:-1:exon
so has part: feature:1210658-1210821:-1:exon
so has part: feature:1210492-1210563:-1:exon
so has part: feature:1210110-1210229:-1:exon
so has part: feature:1209936-1209990:-1:exon
so has part: feature:1209698-1209774:-1:exon
so has part: feature:1209471-1209608:-1:exon
so has part: feature:1209265-1209339:-1:exon
so has part: feature:1208854-1208955:-1:exon
so has part: feature:1208670-1208768:-1:exon
so has part: feature:1208460-1208502:-1:exon
so has part: feature:1208207-1208303:-1:exon
so has part: feature:1207908-1208030:-1:exon
so has part: feature:1207523-1207543:-1:exon
so has part: feature:1206925-1207060:-1:exon
so has part: feature:1206747-1206843:-1:exon
so has part: feature:1206544-1206573:-1:exon
so has part: feature:1205982-1206102:-1:exon
so has part: feature:1205623-1205802:-1:exon
so has part: feature:1205375-1205422:-1:exon
so has part: feature:1204955-1205142:-1:exon
so has part: feature:1204641-1204787:-1:exon
so has part: feature:1204266-1204345:-1:exon
so has part: feature:1204040-1204165:-1:exon
so has part: feature:1203740-1203857:-1:exon
so has part: feature:1203042-1203220:-1:exon
so has part: feature:1202881-1202956:-1:exon
so has part: feature:1202633-1202800:-1:exon
so has part: feature:1202413-1202500:-1:exon
so has part: feature:1202135-1202242:-1:exon
so has part: feature:1201925-1202019:-1:exon
so has part: feature:1201601-1201774:-1:exon
so has part: feature:1201157-1201486:-1:exon
so has part: feature:1200749-1200820:-1:exon
so has part: feature:1199985-1200235:-1:exon
so has part: feature:1199682-1199880:-1:exon
so has part: feature:1199547-1199605:-1:exon

XP_032089741.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1217258-1217286:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1212185-1212276:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1211766-1211864:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1211461-1211510:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1211021-1211078:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1210658-1210821:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1210492-1210563:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1210110-1210229:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1209936-1209990:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1209698-1209774:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1209471-1209608:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1209265-1209339:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1208854-1208955:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1208670-1208768:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1208460-1208502:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1208207-1208303:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1207908-1208030:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1207523-1207543:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1206925-1207060:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1206747-1206843:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1206544-1206573:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1205982-1206102:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1205623-1205802:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1205375-1205422:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1204955-1205142:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1204641-1204787:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1204266-1204345:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1204040-1204165:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1203740-1203857:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1203042-1203220:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1202881-1202956:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1202633-1202800:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1202413-1202500:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1202135-1202242:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1201925-1202019:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1201601-1201774:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1201157-1201486:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1200749-1200820:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1199985-1200235:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1199682-1199880:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1199547-1199605:-1:exon

ARHGEF11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: ARHGEF11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 11 isoform X5
translation: MLQQEEADLQRCYEIYSQNPASLLEEQIEGARRRVAQLQHKIRQEMGELVDGPRWPSDPGSFSARGTEGGLSIDSQDGDSGLDSGTERFSSVSEISLNRNSVLSDPGLGSPHTSPVASSRLFMHHRRQGSDTPFLHSTEQSLDHILRTSIIGPEEDYDPGYLDNENDSLFQDLGKLKTRPAHLGVFLRYIFSQADPSPLLLYLCVDVSQQMSPKEARALSKDIWHIFLDKAAPLRVTVPDQLLAEIEAQLRNGEDVQAAFLEVQEAVMPEIQEQIQDYRTKRTMGLGSLYGENDLLELDGELQKERQVAEKQMAQLWDILSKYEDRSSPMGFALKTYMIHVGICPRESRPASVVEKSQEKDKWLPFFPKAKKSSSSSKKEAAVEDKKRNPILKYIAKPKSASQSTFHVPLSPVEVKPGSVRTIIQHFENSQECQEAALQRLSTGSFPEDLLDSDGSRAEVRLGRSESLKGREELRRLRKAENVPRSRSDVDMDAAAEAARLHQSTSSSASSISTRSLENPTPPYTPKMGRRSIESPSLGFSSEAFLPHLLEDELGQFPDLEMELDSQNWQHTVGREAAAQLPQQEVDRQEVINELFVTESSHLRTLRVLDLLFYQRLRREGQLSREELALLFPNLPELIEIHNSLSESMKKLREEGPVVKEVGDLMLSRFDGAALEEFQQVAAEFCAYQSMALELIRTKKRKETRFQQFMQEAESHPQCRRLQLKDLLISEMQRLTKYPLLLDSLIKHSSGQPEDHRKLCRARDQCREALRYVNEAVKQAENQQRLESYQKRLDATSLERTSNPIAAEFKNLDLRGRRMIHEGPLLWRISKDKTLDLQVLLLGDLLVLLQRQDERLVLKCHSRTVLGSCDPKQTFSPVLRLGSVLIRSVATDKRALFIICTSELGPQIYELVASTSLEKNTWMELLEEAVKSATQAAPLPPQPHARQLCPHQPAPTSFIFPDAEMAPRLDRESSPPSCEAENEEGGASDHTPTEASAAERLEGGHPEEEEEEEGNPPTAPVLPLLEEVPPQRPPCLESMAESALGDVETLRRLLLHSFLPCQDSEPEDDLTPTPSGAGRNRHWGWASQEEPSEGPQAPLLPGPPEPDGQGCVSGPPSSGPTSHPGPGEGLEEVGAPAVQADNQQPETPSCYLVVRKAEVEGSESAQLLMEKDTGAPPDTDGNTFYLSLPADSKQPPAGAHSLGEAEGAFSRAPSLPAGCQERPRETLARWPSPAELPAPSQGTWEAEAVFRTIEQLTLKLTKLKDVEGAYQQLLFRQPPPKGHCTAEGTPGQGSASLPEPSRMLPNTHRGSSISHPSLPSSPQSPVAAKPDVNGLSLALPEDGSQEVSL
SIO_010081: ARHGEF11
subclass of: SO_0000673
so part of: ARHGEF11
location: complement(join(1199547..1199605,1199682..1199880,1199985..1200235,1200749..1200820,1201157..1201486,1201601..1201774,1201925..1202019,1202135..1202242,1202413..1202500,1202633..1202800,1202881..1202956,1203042..1203220,1203740..1203857,1204040..1204165,1204266..1204345,1204641..1204787,1204955..1205142,1205375..1205422,1205623..1205802,1205982..1206102,1206544..1206573,1206747..1206843,1206925..1207060,1207523..1207543,1207908..1208030,1208207..1208303,1208460..1208502,1208670..1208768,1208854..1208955,1209265..1209339,1209471..1209608,1209698..1209774,1209936..1209990,1210110..1210229,1210492..1210521))
location: region:1199547-1210521:-1
so has part: feature:1210492-1210521:-1:exon
so has part: feature:1210110-1210229:-1:exon
so has part: feature:1209936-1209990:-1:exon
so has part: feature:1209698-1209774:-1:exon
so has part: feature:1209471-1209608:-1:exon
so has part: feature:1209265-1209339:-1:exon
so has part: feature:1208854-1208955:-1:exon
so has part: feature:1208670-1208768:-1:exon
so has part: feature:1208460-1208502:-1:exon
so has part: feature:1208207-1208303:-1:exon
so has part: feature:1207908-1208030:-1:exon
so has part: feature:1207523-1207543:-1:exon
so has part: feature:1206925-1207060:-1:exon
so has part: feature:1206747-1206843:-1:exon
so has part: feature:1206544-1206573:-1:exon
so has part: feature:1205982-1206102:-1:exon
so has part: feature:1205623-1205802:-1:exon
so has part: feature:1205375-1205422:-1:exon
so has part: feature:1204955-1205142:-1:exon
so has part: feature:1204641-1204787:-1:exon
so has part: feature:1204266-1204345:-1:exon
so has part: feature:1204040-1204165:-1:exon
so has part: feature:1203740-1203857:-1:exon
so has part: feature:1203042-1203220:-1:exon
so has part: feature:1202881-1202956:-1:exon
so has part: feature:1202633-1202800:-1:exon
so has part: feature:1202413-1202500:-1:exon
so has part: feature:1202135-1202242:-1:exon
so has part: feature:1201925-1202019:-1:exon
so has part: feature:1201601-1201774:-1:exon
so has part: feature:1201157-1201486:-1:exon
so has part: feature:1200749-1200820:-1:exon
so has part: feature:1199985-1200235:-1:exon
so has part: feature:1199682-1199880:-1:exon
so has part: feature:1199547-1199605:-1:exon

XP_032089746.1
type: Protein
SIO_000068: ncbiprotein

position:1210521:-1
position: 1210521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1210492-1210521:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1210110-1210229:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1209936-1209990:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1209698-1209774:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1209471-1209608:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1209265-1209339:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1208854-1208955:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1208670-1208768:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1208460-1208502:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1208207-1208303:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1207908-1208030:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1207523-1207543:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1206925-1207060:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1206747-1206843:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1206544-1206573:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1205982-1206102:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1205623-1205802:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1205375-1205422:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1204955-1205142:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1204641-1204787:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1204266-1204345:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1204040-1204165:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1203740-1203857:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1203042-1203220:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1202881-1202956:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1202633-1202800:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1202413-1202500:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1202135-1202242:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1201925-1202019:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1201601-1201774:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1201157-1201486:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1200749-1200820:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1199985-1200235:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1199682-1199880:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1199547-1199605:-1:exon

LOC116519822
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: LOC116519822
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1224207..1232124)
location: region:1224207-1232124:-1
so has part: feature:1224207-1232124:-1:exon
subclass of: SO_0000010

116519822
type: Gene
SIO_000068: ncbigene

position:1224207:-1
position: 1224207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1232124:-1
position: 1232124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1224207-1232124:-1:exon

LOC116519822
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: LOC116519822
product: ETS translocation variant 3-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_032233876.1
SIO_010081: LOC116519822
subclass of: SO_0000673
so part of: LOC116519822
location: complement(join(1224207..1227919,1229478..1229593,1230422..1230659,1230950..1231005,1232038..1232124))
location: region:1224207-1232124:-1
so has part: feature:1232038-1232124:-1:exon
so has part: feature:1230950-1231005:-1:exon
so has part: feature:1230422-1230659:-1:exon
so has part: feature:1229478-1229593:-1:exon
so has part: feature:1224207-1227919:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1232038-1232124:-1:exon

position:1232038:-1
position: 1232038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1230950-1231005:-1:exon

position:1230950:-1
position: 1230950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1231005:-1
position: 1231005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1230422-1230659:-1:exon

position:1230422:-1
position: 1230422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1230659:-1
position: 1230659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1229478-1229593:-1:exon

position:1229478:-1
position: 1229478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1229593:-1
position: 1229593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1224207-1227919:-1:exon

position:1227919:-1
position: 1227919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116519822
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: LOC116519822
product: ETS translocation variant 3-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_032233875.1
SIO_010081: LOC116519822
subclass of: SO_0000673
so part of: LOC116519822
location: complement(join(1224207..1227919,1229478..1229593,1230422..1230659,1230950..1231005,1231846..1231923))
location: region:1224207-1231923:-1
so has part: feature:1231846-1231923:-1:exon
so has part: feature:1230950-1231005:-1:exon
so has part: feature:1230422-1230659:-1:exon
so has part: feature:1229478-1229593:-1:exon
so has part: feature:1224207-1227919:-1:exon

position:1231923:-1
position: 1231923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1231846-1231923:-1:exon

position:1231846:-1
position: 1231846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1230950-1231005:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1230422-1230659:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1229478-1229593:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1224207-1227919:-1:exon

LOC116519822
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: LOC116519822
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ETS translocation variant 3-like
translation: MKAGCPIVEKPEGGGGYHFPDWAYKTESSPGSRQIQLWHFILELLQKEEFRHVIAWQQGEYGEFVIKDPDEVARLWGRRKCKPQMNYDKLSRALRYYYNKRILHKTKGKRFTYKFNFNKLVMPSYPFLNIRPTGAVPQSAPPVPTASSRFHFSLEGQSPSEDSQPGCFSARALGPPGQEALSNGSADEKASPALELDGGSPDWHRRVDLLASCNTAAAPGTVGHPKRKPDLVLPLFGRGGLYPDAHSPFAGSPLPPRGGVLNVPLSPALSLTPTLFSYSPSSAMSPFAPGGSSCFSFSPEEMKHYLHSQACSVFNYHLSPRTFPRYPGLLLPPLACQPPHEEQPPFPIKLQPPPAGRKHREHHESEGGSGPPPSPPRIKLERPADEEPGGTDSPERVPAGREESEGSGPPLRRPEPPREKRLFLHPAAPAWPGVSLAPVLAKKLKQEEGAPEKLPAQEPGWEPGPPEKREDALMPPKLRLKRRWNGDRLAEAPEETPSGKPSWAGSLDTPHILLAPKAAVDT
SIO_010081: LOC116519822
subclass of: SO_0000673
so part of: LOC116519822
location: complement(join(1226751..1227919,1229478..1229593,1230422..1230659,1230950..1230995))
location: region:1226751-1230995:-1
so has part: feature:1230950-1230995:-1:exon
so has part: feature:1230422-1230659:-1:exon
so has part: feature:1229478-1229593:-1:exon
so has part: feature:1226751-1227919:-1:exon

XP_032089766.1
type: Protein
SIO_000068: ncbiprotein

position:1226751:-1
position: 1226751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1230995:-1
position: 1230995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1230950-1230995:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1230422-1230659:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1229478-1229593:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1226751-1227919:-1:exon

LOC116519822
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: LOC116519822
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ETS translocation variant 3-like
translation: MKAGCPIVEKPEGGGGYHFPDWAYKTESSPGSRQIQLWHFILELLQKEEFRHVIAWQQGEYGEFVIKDPDEVARLWGRRKCKPQMNYDKLSRALRYYYNKRILHKTKGKRFTYKFNFNKLVMPSYPFLNIRPTGAVPQSAPPVPTASSRFHFSLEGQSPSEDSQPGCFSARALGPPGQEALSNGSADEKASPALELDGGSPDWHRRVDLLASCNTAAAPGTVGHPKRKPDLVLPLFGRGGLYPDAHSPFAGSPLPPRGGVLNVPLSPALSLTPTLFSYSPSSAMSPFAPGGSSCFSFSPEEMKHYLHSQACSVFNYHLSPRTFPRYPGLLLPPLACQPPHEEQPPFPIKLQPPPAGRKHREHHESEGGSGPPPSPPRIKLERPADEEPGGTDSPERVPAGREESEGSGPPLRRPEPPREKRLFLHPAAPAWPGVSLAPVLAKKLKQEEGAPEKLPAQEPGWEPGPPEKREDALMPPKLRLKRRWNGDRLAEAPEETPSGKPSWAGSLDTPHILLAPKAAVDT
SIO_010081: LOC116519822
subclass of: SO_0000673
so part of: LOC116519822
location: complement(join(1226751..1227919,1229478..1229593,1230422..1230659,1230950..1230995))
location: region:1226751-1230995:-1
so has part: feature:1230950-1230995:-1:exon
so has part: feature:1230422-1230659:-1:exon
so has part: feature:1229478-1229593:-1:exon
so has part: feature:1226751-1227919:-1:exon

XP_032089767.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1230950-1230995:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1230422-1230659:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1229478-1229593:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1226751-1227919:-1:exon

MRPL24
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: MRPL24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1235123..1237185
location: region:1235123-1237185:1
so has part: feature:1235123-1237185:1:exon
subclass of: SO_0000010

116519835
type: Gene
SIO_000068: ncbigene

position:1235123:1
position: 1235123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1237185:1
position: 1237185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1235123-1237185:1:exon

MRPL24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: MRPL24
product: mitochondrial ribosomal protein L24
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_032233895.1
SIO_010081: MRPL24
subclass of: SO_0000673
so part of: MRPL24
location: join(1235123..1235366,1235474..1235628,1235717..1235812,1235934..1236031,1236391..1236521,1236912..1237185)
location: region:1235123-1237185:1
so has part: feature:1235123-1235366:1:exon
so has part: feature:1235474-1235628:1:exon
so has part: feature:1235717-1235812:1:exon
so has part: feature:1235934-1236031:1:exon
so has part: feature:1236391-1236521:1:exon
so has part: feature:1236912-1237185:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1235123-1235366:1:exon

position:1235366:1
position: 1235366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1235474-1235628:1:exon

position:1235474:1
position: 1235474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1235628:1
position: 1235628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1235717-1235812:1:exon

position:1235717:1
position: 1235717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1235812:1
position: 1235812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1235934-1236031:1:exon

position:1235934:1
position: 1235934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1236031:1
position: 1236031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1236391-1236521:1:exon

position:1236391:1
position: 1236391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1236521:1
position: 1236521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1236912-1237185:1:exon

position:1236912:1
position: 1236912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MRPL24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: MRPL24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 39S ribosomal protein L24, mitochondrial
translation: MQPSRCHPAIQASLSPARLAARRRCEWDALSGRLQRLLAREPQTDALRLLGLQIPGCTAGRPTCSPRPAGKRGGGGGAMRLTRLLAMAEKLAPPWAPELGRAGKAARRKKPVLPAIPEEDWQVFRGDTVQVLSGREAGKQSQVIQVDKEQQSVLLDRLNMGYYYADTVAGRAMFAREQPLPLKEVGLVDPTDRLPTEVAWRYTEQGERVRVSVRTGRIIPKPVEQREDGIVPELWVDGPKDTSTKDALEKTYTPSLKTFQEEIMERMGIVETRRQRKSYWY
SIO_010081: MRPL24
subclass of: SO_0000673
so part of: MRPL24
location: join(1235138..1235366,1235474..1235628,1235717..1235812,1235934..1236031,1236391..1236521,1236912..1237048)
location: region:1235138-1237048:1
so has part: feature:1235138-1235366:1:exon
so has part: feature:1235474-1235628:1:exon
so has part: feature:1235717-1235812:1:exon
so has part: feature:1235934-1236031:1:exon
so has part: feature:1236391-1236521:1:exon
so has part: feature:1236912-1237048:1:exon

XP_032089786.1
type: Protein
SIO_000068: ncbiprotein

position:1235138:1
position: 1235138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1237048:1
position: 1237048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1235138-1235366:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1235474-1235628:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1235717-1235812:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1235934-1236031:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1236391-1236521:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1236912-1237048:1:exon

RRNAD1
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: RRNAD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1237118..1239738)
location: region:1237118-1239738:-1
so has part: feature:1237118-1239738:-1:exon
subclass of: SO_0000010

116519829
type: Gene
SIO_000068: ncbigene

position:1237118:-1
position: 1237118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1239738:-1
position: 1239738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1237118-1239738:-1:exon

RRNAD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: RRNAD1
product: ribosomal RNA adenine dimethylase domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_032233886.1
SIO_010081: RRNAD1
subclass of: SO_0000673
so part of: RRNAD1
location: complement(join(1237118..1237471,1237719..1237891,1238022..1238668,1238751..1238891,1238973..1239035,1239123..1239395,1239496..1239738))
location: region:1237118-1239738:-1
so has part: feature:1239496-1239738:-1:exon
so has part: feature:1239123-1239395:-1:exon
so has part: feature:1238973-1239035:-1:exon
so has part: feature:1238751-1238891:-1:exon
so has part: feature:1238022-1238668:-1:exon
so has part: feature:1237719-1237891:-1:exon
so has part: feature:1237118-1237471:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1239496-1239738:-1:exon

position:1239496:-1
position: 1239496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1239123-1239395:-1:exon

position:1239123:-1
position: 1239123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1239395:-1
position: 1239395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1238973-1239035:-1:exon

position:1238973:-1
position: 1238973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1239035:-1
position: 1239035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1238751-1238891:-1:exon

position:1238751:-1
position: 1238751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1238891:-1
position: 1238891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1238022-1238668:-1:exon

position:1238022:-1
position: 1238022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1238668:-1
position: 1238668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1237719-1237891:-1:exon

position:1237719:-1
position: 1237719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1237891:-1
position: 1237891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1237118-1237471:-1:exon

position:1237471:-1
position: 1237471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RRNAD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: RRNAD1
product: ribosomal RNA adenine dimethylase domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_032233885.1
SIO_010081: RRNAD1
subclass of: SO_0000673
so part of: RRNAD1
location: complement(join(1237118..1237471,1237719..1237891,1238022..1238668,1238751..1238891,1238973..1239035,1239496..1239690))
location: region:1237118-1239690:-1
so has part: feature:1239496-1239690:-1:exon
so has part: feature:1238973-1239035:-1:exon
so has part: feature:1238751-1238891:-1:exon
so has part: feature:1238022-1238668:-1:exon
so has part: feature:1237719-1237891:-1:exon
so has part: feature:1237118-1237471:-1:exon

position:1239690:-1
position: 1239690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1239496-1239690:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1238973-1239035:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1238751-1238891:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1238022-1238668:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1237719-1237891:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1237118-1237471:-1:exon

RRNAD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: RRNAD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein RRNAD1 isoform X1
translation: MRGFALEQQKRLAASLVRVLALYRPLTDAYVIVLERLSQLTGCPQVVDVGAGQGHLARFLAFGLRLSVTAVEGDARLVTQAARFDRALALELEKEQARRQEPDAPPAQGPSHVVGWVTPDTRWPEFVELLRSGKVAGGESSWAAAARQPREPGERGAGKGGADCGGGDGPESLEQNPPTHLQGQLPQGPLLLTSLHACGDLSATLLRLFVACPHMVGITSVSCCYMKLSTGEGARPGYPLSDWVAALPGHQLSYKAREGACHAMEDYLLRLEHDSPSLKTHCYRARLETLIRAIDPTKKRLGVQAIPKAHQMTFEQYARQGLERVGMSPRGPLEPASAAQQRQVVVFFSLAHLLAPLVETLILLDRMIYLQEQGFPCALVPLFDPALSARNLVLVAAKKVPPSDLWGLAAGE
SIO_010081: RRNAD1
subclass of: SO_0000673
so part of: RRNAD1
location: complement(join(1237353..1237471,1237719..1237891,1238022..1238668,1238751..1238891,1238973..1239035,1239496..1239591))
location: region:1237353-1239591:-1
so has part: feature:1239496-1239591:-1:exon
so has part: feature:1238973-1239035:-1:exon
so has part: feature:1238751-1238891:-1:exon
so has part: feature:1238022-1238668:-1:exon
so has part: feature:1237719-1237891:-1:exon
so has part: feature:1237353-1237471:-1:exon

XP_032089776.1
type: Protein
SIO_000068: ncbiprotein

position:1237353:-1
position: 1237353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1239591:-1
position: 1239591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1239496-1239591:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1238973-1239035:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1238751-1238891:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1238022-1238668:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1237719-1237891:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1237353-1237471:-1:exon

RRNAD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: RRNAD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein RRNAD1 isoform X2
translation: MRGFALEQQKRLAASLVRVLALYRPLTDAYVIEFFSDGLWGLLPGGWQAALGGLSPPEVAALLLRGGRPAELWPLSLLAFRAAAHALRFPRRPSAAAPEPPLPPRFRRHLRPKKQHEVRRLAQVLERLSQLTGCPQVVDVGAGQGHLARFLAFGLRLSVTAVEGDARLVTQAARFDRALALELEKEQARRQEPDAPPAQGPSHVVGWVTPDTRWPEFVELLRSGKVAGGESSWAAAARQPREPGERGAGKGGADCGGGDGPESLEQNPPTHLQGQLPQGPLLLTSLHACGDLSATLLRLFVACPHMVGITSVSCCYMKLSTGEGARPGYPLSDWVAALPGHQLSYKAREGACHAMEDYLLRLEHDSPSLKTHCYRARLETLIRAIDPTKKRLGVQAIPKAHQMTFEQYARQGLERVGMSPRGPLEPASAAQQRQVVVFFSLAHLLAPLVETLILLDRMIYLQEQGFPCALVPLFDPALSARNLVLVAAKKVPPSDLWGLAAGE
SIO_010081: RRNAD1
subclass of: SO_0000673
so part of: RRNAD1
location: complement(join(1237353..1237471,1237719..1237891,1238022..1238668,1238751..1238891,1238973..1239035,1239123..1239395,1239496..1239591))
location: region:1237353-1239591:-1
so has part: feature:1239496-1239591:-1:exon
so has part: feature:1239123-1239395:-1:exon
so has part: feature:1238973-1239035:-1:exon
so has part: feature:1238751-1238891:-1:exon
so has part: feature:1238022-1238668:-1:exon
so has part: feature:1237719-1237891:-1:exon
so has part: feature:1237353-1237471:-1:exon

XP_032089777.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1239496-1239591:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1239123-1239395:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1238973-1239035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1238751-1238891:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1238022-1238668:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1237719-1237891:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1237353-1237471:-1:exon

ISG20L2
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: ISG20L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1239781..1242543
location: region:1239781-1242543:1
so has part: feature:1239781-1242543:1:exon
subclass of: SO_0000010

116519831
type: Gene
SIO_000068: ncbigene

position:1239781:1
position: 1239781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1242543:1
position: 1242543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1239781-1242543:1:exon

ISG20L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: ISG20L2
product: interferon stimulated exonuclease gene 20 like 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_032233889.1
SIO_010081: ISG20L2
subclass of: SO_0000673
so part of: ISG20L2
location: join(1239781..1241136,1241318..1241518,1241719..1242543)
location: region:1239781-1242543:1
so has part: feature:1239781-1241136:1:exon
so has part: feature:1241318-1241518:1:exon
so has part: feature:1241719-1242543:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1239781-1241136:1:exon

position:1241136:1
position: 1241136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1241318-1241518:1:exon

position:1241318:1
position: 1241318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1241518:1
position: 1241518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1241719-1242543:1:exon

position:1241719:1
position: 1241719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ISG20L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: ISG20L2
product: interferon stimulated exonuclease gene 20 like 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_032233890.1
SIO_010081: ISG20L2
subclass of: SO_0000673
so part of: ISG20L2
location: join(1239781..1240131,1240282..1241136,1241318..1241518,1241719..1242543)
location: region:1239781-1242543:1
so has part: feature:1239781-1240131:1:exon
so has part: feature:1240282-1241136:1:exon
so has part: feature:1241318-1241518:1:exon
so has part: feature:1241719-1242543:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1239781-1240131:1:exon

position:1240131:1
position: 1240131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1240282-1241136:1:exon

position:1240282:1
position: 1240282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1241318-1241518:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1241719-1242543:1:exon

ISG20L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: ISG20L2
product: interferon stimulated exonuclease gene 20 like 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_032233891.1
SIO_010081: ISG20L2
subclass of: SO_0000673
so part of: ISG20L2
location: join(1239781..1239906,1240282..1241136,1241318..1241518,1241719..1242543)
location: region:1239781-1242543:1
so has part: feature:1239781-1239906:1:exon
so has part: feature:1240282-1241136:1:exon
so has part: feature:1241318-1241518:1:exon
so has part: feature:1241719-1242543:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1239781-1239906:1:exon

position:1239906:1
position: 1239906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1240282-1241136:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1241318-1241518:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1241719-1242543:1:exon

ISG20L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: ISG20L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon-stimulated 20 kDa exonuclease-like 2
translation: MSDLLLNLETVLPPPPAQKGPAGGNKKHQRFVKRRQFLERKGFLKQKQLPPQPPPPRRDTSLGCPAGPHRPKKKQRVEAKEGGKPSPEERPPCRLKMPPKETSGSGAVDPTSWTSGSSAAAAASSSRKTGSGAGKPNGTLCSRGDVPRVDLLSEFKSGLPDAPGLAKPSKMVAIDCEMVGTGPGGRNSDLARCSVVGYYGDVMYDKYIRPLSPITNYRTRWSGIRQHHMRDAVPFKLAQKEILKLLSGKIVIGHAIHNDFKALKYFHPKSLTRDTSKIPLLNRKAGFPENESASLKRLTKQLLHQDIQVGHNGHSSVEDARATMELYKVIEVEWERHLATSPLQDGPPDTT
SIO_010081: ISG20L2
subclass of: SO_0000673
so part of: ISG20L2
location: join(1240414..1241136,1241318..1241518,1241719..1241850)
location: region:1240414-1241850:1
so has part: feature:1240414-1241136:1:exon
so has part: feature:1241318-1241518:1:exon
so has part: feature:1241719-1241850:1:exon

XP_032089780.1
type: Protein
SIO_000068: ncbiprotein

position:1240414:1
position: 1240414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1241850:1
position: 1241850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1240414-1241136:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1241318-1241518:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1241719-1241850:1:exon

ISG20L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: ISG20L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon-stimulated 20 kDa exonuclease-like 2
translation: MSDLLLNLETVLPPPPAQKGPAGGNKKHQRFVKRRQFLERKGFLKQKQLPPQPPPPRRDTSLGCPAGPHRPKKKQRVEAKEGGKPSPEERPPCRLKMPPKETSGSGAVDPTSWTSGSSAAAAASSSRKTGSGAGKPNGTLCSRGDVPRVDLLSEFKSGLPDAPGLAKPSKMVAIDCEMVGTGPGGRNSDLARCSVVGYYGDVMYDKYIRPLSPITNYRTRWSGIRQHHMRDAVPFKLAQKEILKLLSGKIVIGHAIHNDFKALKYFHPKSLTRDTSKIPLLNRKAGFPENESASLKRLTKQLLHQDIQVGHNGHSSVEDARATMELYKVIEVEWERHLATSPLQDGPPDTT
SIO_010081: ISG20L2
subclass of: SO_0000673
so part of: ISG20L2
location: join(1240414..1241136,1241318..1241518,1241719..1241850)
location: region:1240414-1241850:1
so has part: feature:1240414-1241136:1:exon
so has part: feature:1241318-1241518:1:exon
so has part: feature:1241719-1241850:1:exon

XP_032089781.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1240414-1241136:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1241318-1241518:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1241719-1241850:1:exon

ISG20L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: ISG20L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon-stimulated 20 kDa exonuclease-like 2
translation: MSDLLLNLETVLPPPPAQKGPAGGNKKHQRFVKRRQFLERKGFLKQKQLPPQPPPPRRDTSLGCPAGPHRPKKKQRVEAKEGGKPSPEERPPCRLKMPPKETSGSGAVDPTSWTSGSSAAAAASSSRKTGSGAGKPNGTLCSRGDVPRVDLLSEFKSGLPDAPGLAKPSKMVAIDCEMVGTGPGGRNSDLARCSVVGYYGDVMYDKYIRPLSPITNYRTRWSGIRQHHMRDAVPFKLAQKEILKLLSGKIVIGHAIHNDFKALKYFHPKSLTRDTSKIPLLNRKAGFPENESASLKRLTKQLLHQDIQVGHNGHSSVEDARATMELYKVIEVEWERHLATSPLQDGPPDTT
SIO_010081: ISG20L2
subclass of: SO_0000673
so part of: ISG20L2
location: join(1240414..1241136,1241318..1241518,1241719..1241850)
location: region:1240414-1241850:1
so has part: feature:1240414-1241136:1:exon
so has part: feature:1241318-1241518:1:exon
so has part: feature:1241719-1241850:1:exon

XP_032089782.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1240414-1241136:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1241318-1241518:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1241719-1241850:1:exon

CRABP2
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: CRABP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1250918..1255749
location: region:1250918-1255749:1
so has part: feature:1250918-1255749:1:exon
subclass of: SO_0000010

116520097
type: Gene
SIO_000068: ncbigene

position:1250918:1
position: 1250918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1255749:1
position: 1255749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1250918-1255749:1:exon

CRABP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: CRABP2
product: cellular retinoic acid binding protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032234251.1
SIO_010081: CRABP2
subclass of: SO_0000673
so part of: CRABP2
location: join(1250918..1250987,1253792..1253970,1254606..1254722,1255138..1255749)
location: region:1250918-1255749:1
so has part: feature:1250918-1250987:1:exon
so has part: feature:1253792-1253970:1:exon
so has part: feature:1254606-1254722:1:exon
so has part: feature:1255138-1255749:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1250918-1250987:1:exon

position:1250987:1
position: 1250987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1253792-1253970:1:exon

position:1253792:1
position: 1253792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1253970:1
position: 1253970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1254606-1254722:1:exon

position:1254606:1
position: 1254606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1254722:1
position: 1254722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1255138-1255749:1:exon

position:1255138:1
position: 1255138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CRABP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: CRABP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cellular retinoic acid-binding protein 2
translation: MANFTGTWKIFASELFDELLKEHGVNIIRRQLATAAASKSEVEIKQEGSSFKIKTSTPVRTTEIHFEVGKEFEEQTVDGRPCKSLAEWENSNKIVCEQKLLEGEGPKTSWSRELTNDGELILTMKANNVVCTRTYRRK
SIO_010081: CRABP2
subclass of: SO_0000673
so part of: CRABP2
location: join(1250918..1250987,1253792..1253970,1254606..1254722,1255138..1255188)
location: region:1250918-1255188:1
so has part: feature:1250918-1250987:1:exon
so has part: feature:1253792-1253970:1:exon
so has part: feature:1254606-1254722:1:exon
so has part: feature:1255138-1255188:1:exon

XP_032090142.1
type: Protein
SIO_000068: ncbiprotein

position:1255188:1
position: 1255188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1250918-1250987:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1253792-1253970:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1254606-1254722:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1255138-1255188:1:exon

LOC116519830
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: LOC116519830
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1257637..1264112)
location: region:1257637-1264112:-1
so has part: feature:1257637-1264112:-1:exon
subclass of: SO_0000010

116519830
type: Gene
SIO_000068: ncbigene

position:1257637:-1
position: 1257637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1264112:-1
position: 1264112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1257637-1264112:-1:exon

LOC116519830
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: LOC116519830
product: dnaJ homolog subfamily A member 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 55 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_032233887.1
SIO_010081: LOC116519830
subclass of: SO_0000673
so part of: LOC116519830
location: complement(join(1257637..1258842,1259085..1259185,1259285..1259515,1259813..1260040,1260641..1260745,1261145..1261337,1261431..1261581,1264059..1264112))
location: region:1257637-1264112:-1
so has part: feature:1264059-1264112:-1:exon
so has part: feature:1261431-1261581:-1:exon
so has part: feature:1261145-1261337:-1:exon
so has part: feature:1260641-1260745:-1:exon
so has part: feature:1259813-1260040:-1:exon
so has part: feature:1259285-1259515:-1:exon
so has part: feature:1259085-1259185:-1:exon
so has part: feature:1257637-1258842:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1264059-1264112:-1:exon

position:1264059:-1
position: 1264059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1261431-1261581:-1:exon

position:1261431:-1
position: 1261431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1261581:-1
position: 1261581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1261145-1261337:-1:exon

position:1261145:-1
position: 1261145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1261337:-1
position: 1261337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1260641-1260745:-1:exon

position:1260641:-1
position: 1260641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1260745:-1
position: 1260745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1259813-1260040:-1:exon

position:1259813:-1
position: 1259813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1260040:-1
position: 1260040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1259285-1259515:-1:exon

position:1259285:-1
position: 1259285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1259515:-1
position: 1259515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1259085-1259185:-1:exon

position:1259085:-1
position: 1259085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1259185:-1
position: 1259185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1257637-1258842:-1:exon

position:1258842:-1
position: 1258842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116519830
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: LOC116519830
product: dnaJ homolog subfamily A member 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 56 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_032233888.1
SIO_010081: LOC116519830
subclass of: SO_0000673
so part of: LOC116519830
location: complement(join(1257637..1258842,1259085..1259185,1259285..1259515,1259813..1260040,1260641..1260745,1261145..1261337,1261431..1261581,1262388..1263920))
location: region:1257637-1263920:-1
so has part: feature:1262388-1263920:-1:exon
so has part: feature:1261431-1261581:-1:exon
so has part: feature:1261145-1261337:-1:exon
so has part: feature:1260641-1260745:-1:exon
so has part: feature:1259813-1260040:-1:exon
so has part: feature:1259285-1259515:-1:exon
so has part: feature:1259085-1259185:-1:exon
so has part: feature:1257637-1258842:-1:exon

position:1263920:-1
position: 1263920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1262388-1263920:-1:exon

position:1262388:-1
position: 1262388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1261431-1261581:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1261145-1261337:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1260641-1260745:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1259813-1260040:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1259285-1259515:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1259085-1259185:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1257637-1258842:-1:exon

LOC116519830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: LOC116519830
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily A member 1-like
translation: MVKETGYYDLLGVKPCATMDEIKRAYRRLALRYHPDKNPSEGERFKQISQAYEVLSDPSKRSVYDRGGERAMKEGGAAGRGGFGPPMDIFDLFFGGGGRTQGPRVERRGKTAVHLLTVTLEDLYNGATRKLSLQKNVICRSCAGRGGREGLDVRCPKCHGTGMEVIVHQLGPNMVHHIQAMCSQCQGQGEWVRPLDRCLACNGRKVTREKKILNVHLDKGMADRQKITFHQEGDQAPGFEPGDIVIVLDQKPHPVFQRSGNDLIVRREVPLVDALCGCKQVIRTLDNRRLLVSTRPGCVIKPGDIRCIPNEGMPVYRSPGQKGRLVIHFEVKFPEPGWLPLHQLRQFQSFFPRHEEVMATEDMEEVELREYFPQPDFSGRRFQSDIFHEGDFDDPLRHNVQCQTS
SIO_010081: LOC116519830
subclass of: SO_0000673
so part of: LOC116519830
location: complement(join(1258615..1258842,1259085..1259185,1259285..1259515,1259813..1260040,1260641..1260745,1261145..1261337,1261431..1261562))
location: region:1258615-1261562:-1
so has part: feature:1261431-1261562:-1:exon
so has part: feature:1261145-1261337:-1:exon
so has part: feature:1260641-1260745:-1:exon
so has part: feature:1259813-1260040:-1:exon
so has part: feature:1259285-1259515:-1:exon
so has part: feature:1259085-1259185:-1:exon
so has part: feature:1258615-1258842:-1:exon

XP_032089778.1
type: Protein
SIO_000068: ncbiprotein

position:1258615:-1
position: 1258615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1261562:-1
position: 1261562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1261431-1261562:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1261145-1261337:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1260641-1260745:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1259813-1260040:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1259285-1259515:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1259085-1259185:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1258615-1258842:-1:exon

LOC116519830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: LOC116519830
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily A member 1-like
translation: MVKETGYYDLLGVKPCATMDEIKRAYRRLALRYHPDKNPSEGERFKQISQAYEVLSDPSKRSVYDRGGERAMKEGGAAGRGGFGPPMDIFDLFFGGGGRTQGPRVERRGKTAVHLLTVTLEDLYNGATRKLSLQKNVICRSCAGRGGREGLDVRCPKCHGTGMEVIVHQLGPNMVHHIQAMCSQCQGQGEWVRPLDRCLACNGRKVTREKKILNVHLDKGMADRQKITFHQEGDQAPGFEPGDIVIVLDQKPHPVFQRSGNDLIVRREVPLVDALCGCKQVIRTLDNRRLLVSTRPGCVIKPGDIRCIPNEGMPVYRSPGQKGRLVIHFEVKFPEPGWLPLHQLRQFQSFFPRHEEVMATEDMEEVELREYFPQPDFSGRRFQSDIFHEGDFDDPLRHNVQCQTS
SIO_010081: LOC116519830
subclass of: SO_0000673
so part of: LOC116519830
location: complement(join(1258615..1258842,1259085..1259185,1259285..1259515,1259813..1260040,1260641..1260745,1261145..1261337,1261431..1261562))
location: region:1258615-1261562:-1
so has part: feature:1261431-1261562:-1:exon
so has part: feature:1261145-1261337:-1:exon
so has part: feature:1260641-1260745:-1:exon
so has part: feature:1259813-1260040:-1:exon
so has part: feature:1259285-1259515:-1:exon
so has part: feature:1259085-1259185:-1:exon
so has part: feature:1258615-1258842:-1:exon

XP_032089779.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1261431-1261562:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1261145-1261337:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1260641-1260745:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1259813-1260040:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1259285-1259515:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1259085-1259185:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1258615-1258842:-1:exon

NES
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: NES
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1272549..1280685)
location: region:1272549-1280685:-1
so has part: feature:1272549-1280685:-1:exon
subclass of: SO_0000010

116520098
type: Gene
SIO_000068: ncbigene

position:1272549:-1
position: 1272549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1280685:-1
position: 1280685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1272549-1280685:-1:exon

NES
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: NES
product: nestin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032234252.1
SIO_010081: NES
subclass of: SO_0000673
so part of: NES
location: complement(join(1272549..1276991,1277052..1277503,1277906..1277979,1278530..1278654,1279822..1280685))
location: region:1272549-1280685:-1
so has part: feature:1279822-1280685:-1:exon
so has part: feature:1278530-1278654:-1:exon
so has part: feature:1277906-1277979:-1:exon
so has part: feature:1277052-1277503:-1:exon
so has part: feature:1272549-1276991:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1279822-1280685:-1:exon

position:1279822:-1
position: 1279822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1278530-1278654:-1:exon

position:1278530:-1
position: 1278530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1278654:-1
position: 1278654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1277906-1277979:-1:exon

position:1277906:-1
position: 1277906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1277979:-1
position: 1277979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1277052-1277503:-1:exon

position:1277052:-1
position: 1277052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1277503:-1
position: 1277503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1272549-1276991:-1:exon

position:1276991:-1
position: 1276991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NES
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: NES
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nestin
translation: MESFLSSSSRSLGEESLQMWDLNKRLEAYLARVKFLEEENELLKAEIHGLKGGLVETPWRAKYEAEVATLRATLDQAYQEKCVVELARDSLYEEVQQVTSRCQRERAAQEETKMLLSLSKKEMEEEKRAHIWLREKATQLEKEVEELVEAHQEELLRLDQEMTSFSHRLDGFRAAPACFQPVEVEDYAKRLTNIWKGAVETYKMEVSQLEASLCEAKENLWKATERNRQNQLQLQQLEKELAGLKVRKTTLEESLSQQWAQQQGDAEKLQMALEALEEEKQSLRGQISQVLEDRQQLVHLKMSLSLEVATYRTLLEAESTRLQLPATDLQLARGLRDVTTESTLSRLQGPSVDRGRLGSRDVRPSPATLPKLRGFQSKVESPSWGAKTPSSAAREFQKANASLRHSQAAKSPDGLLPPPKEPSAFRLDSSSQHSQRVTVTHSESLLAQSVFCPRPPLAFSSVKEEASGGSPGSLGRGEESKGEAKREEEEEEERQLSRQPPAEREVLDGPFLSQMVTEAVETAIQEVRPRETHLEPSLLQAVKSQAGVSSDSSSSLGEENGFPLSSTEGLEKAQQDPRGGGQPADPLEEFQVCEDFAEVNGGQEAWAELQGAEEAWGALEAEAPLALGAELPRAERMGGGGGGGDLLPGEADEENGSPEWKEREEEDLPALLGGTLGSAVGEAAEKSEFATEADAHVNGSQEGWELGGPPTDILEGAPEGNTEEVYGGAEAVEMLSPEDLSEKEPQGPPREDDQGGLQAEPLEVEASPAKEDWSTTTRTALSAGDHQKTLLPEEEQETFESREELLHEADSALPEGEGKGPDATEEALPRSSGPAVDEDGLLADEPKGAESREEEKGGDVAGPLPTEDRGDEGTMEAEGYLDLEAPKSILELGATVPGEDAAILQLRETLGEDQRREVAGGGGLEPLEEQEGGGGGGGWLPEIPLQAEGSNWEERDLVTISGGPGSEDLMEVLQMEEVCGAVVAENLLQKKEGGPKDSEDKGWGLDDHQAGEQPLGTEDPSREETTWPEEALELAEAPAEDSIPHREEDSGTEETLGHSDFLPNGPRERGGAGEEDVQLGETLPGQLASDHGLTLPETPSLPSLEREEEAPLLEEDTASLLLVKGDGGEEGPPGGERGCSPQEDGPCSEEPLAAEGSAEAVIQRQPFTADGEDRGPGEAEQEDLEGAPGLEPEEDPWQEGEAAKGPVVPTEEVAPELPSEPGDGFGSPADGCDPSYTQQEEEEEEEDQGPLGSSDQEPPDVGPAKVSPLTSVTDLGEIVLEGDGAVESDTLGPCEDECFHVFDAEDLIQQKFVAVEDPPGTGSPERFPEDLAGLLESKGDPNILEIVEQALEFNQELMKAAEEERGGPGKEAQGSPEERSPYAPPARLDQGPPQVPTEAPEGSPPIPREAHPSGESQANGLQEEPILDEFPSELLNGLGQGKADPPEDEDFIKEVTIAPQFCPEDSPPRAETLSQSPPPVPAGEEGFRSGGTSPEVLEKVSLDQELLDEDILDDLRQKTCVKGGKDANLEPMPFLFGDEIRRQPLEFRPEGDLDLQPSEDD
SIO_010081: NES
subclass of: SO_0000673
so part of: NES
location: complement(join(1273767..1276991,1277052..1277503,1277906..1277979,1278530..1278654,1279822..1280631))
location: region:1273767-1280631:-1
so has part: feature:1279822-1280631:-1:exon
so has part: feature:1278530-1278654:-1:exon
so has part: feature:1277906-1277979:-1:exon
so has part: feature:1277052-1277503:-1:exon
so has part: feature:1273767-1276991:-1:exon

XP_032090143.1
type: Protein
SIO_000068: ncbiprotein

position:1273767:-1
position: 1273767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1280631:-1
position: 1280631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1279822-1280631:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1278530-1278654:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1277906-1277979:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1277052-1277503:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1273767-1276991:-1:exon

LOC116520101
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: LOC116520101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1282403..1284393)
location: region:1282403-1284393:-1
so has part: feature:1282403-1284393:-1:exon
subclass of: SO_0000010

116520101
type: Gene
SIO_000068: ncbigene

position:1282403:-1
position: 1282403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1284393:-1
position: 1284393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1282403-1284393:-1:exon

LOC116520101
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: LOC116520101
product: myb-related transcription factor, partner of profilin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 82% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032234253.1
SIO_010081: LOC116520101
subclass of: SO_0000673
so part of: LOC116520101
location: complement(join(1282403..1282695,1282858..1283082,1283168..1283293,1283379..1283597,1283688..1283722,1284093..1284116,1284362..1284393))
location: region:1282403-1284393:-1
so has part: feature:1284362-1284393:-1:exon
so has part: feature:1284093-1284116:-1:exon
so has part: feature:1283688-1283722:-1:exon
so has part: feature:1283379-1283597:-1:exon
so has part: feature:1283168-1283293:-1:exon
so has part: feature:1282858-1283082:-1:exon
so has part: feature:1282403-1282695:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1284362-1284393:-1:exon

position:1284362:-1
position: 1284362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1284093-1284116:-1:exon

position:1284093:-1
position: 1284093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1284116:-1
position: 1284116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1283688-1283722:-1:exon

position:1283688:-1
position: 1283688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1283722:-1
position: 1283722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1283379-1283597:-1:exon

position:1283379:-1
position: 1283379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1283597:-1
position: 1283597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1283168-1283293:-1:exon

position:1283168:-1
position: 1283168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1283293:-1
position: 1283293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1282858-1283082:-1:exon

position:1282858:-1
position: 1282858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1283082:-1
position: 1283082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1282403-1282695:-1:exon

position:1282695:-1
position: 1282695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116520101
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: LOC116520101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myb-related transcription factor, partner of profilin-like
translation: MGSWLSCLGSRPSRDSNRNSLPKKREETEDGAALTEPLLPPLAARTPSPPPSPPPASGSLDFAAPPPSAPQPAGRELGPALSLETLQERLEALKSLQGQYLRGQLRIRRTCRDFPRALRALSLQICRSRRRLIRAEVRLQRRETEGAFIARPSPPPSELLALASGRPGLSADAASLSGCSLLLLPAPPPPPAPPPLPPHLPDLHEALETFLDCQARHLHDRQRDYRSCQECVRSIKTLRGQLRRVRSRLWRVEAELGIQVPPRELSVEDQEDDEDEEDGPPWLPPALRAARREGQNAPLLDSLISGRLLEAEVPACP
SIO_010081: LOC116520101
subclass of: SO_0000673
so part of: LOC116520101
location: complement(join(1282403..1282695,1282858..1283082,1283168..1283293,1283379..1283597,1283688..1283722,1284093..1284116,1284362..1284393))
location: region:1282403-1284393:-1
so has part: feature:1284362-1284393:-1:exon
so has part: feature:1284093-1284116:-1:exon
so has part: feature:1283688-1283722:-1:exon
so has part: feature:1283379-1283597:-1:exon
so has part: feature:1283168-1283293:-1:exon
so has part: feature:1282858-1283082:-1:exon
so has part: feature:1282403-1282695:-1:exon

XP_032090144.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1284362-1284393:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1284093-1284116:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1283688-1283722:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1283379-1283597:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1283168-1283293:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1282858-1283082:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1282403-1282695:-1:exon

HDGF
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: HDGF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1285410..1296707)
location: region:1285410-1296707:-1
so has part: feature:1285410-1296707:-1:exon
subclass of: SO_0000010

116519772
type: Gene
SIO_000068: ncbigene

position:1285410:-1
position: 1285410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1296707:-1
position: 1296707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1285410-1296707:-1:exon

HDGF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: HDGF
product: heparin binding growth factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_032233799.1
SIO_010081: HDGF
subclass of: SO_0000673
so part of: HDGF
location: complement(join(1285410..1285702,1285855..1286126,1286212..1286415,1286814..1286952,1287211..1287287,1296587..1296707))
location: region:1285410-1296707:-1
so has part: feature:1296587-1296707:-1:exon
so has part: feature:1287211-1287287:-1:exon
so has part: feature:1286814-1286952:-1:exon
so has part: feature:1286212-1286415:-1:exon
so has part: feature:1285855-1286126:-1:exon
so has part: feature:1285410-1285702:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1296587-1296707:-1:exon

position:1296587:-1
position: 1296587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1287211-1287287:-1:exon

position:1287211:-1
position: 1287211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1287287:-1
position: 1287287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1286814-1286952:-1:exon

position:1286814:-1
position: 1286814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1286952:-1
position: 1286952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1286212-1286415:-1:exon

position:1286212:-1
position: 1286212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1286415:-1
position: 1286415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1285855-1286126:-1:exon

position:1285855:-1
position: 1285855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1286126:-1
position: 1286126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1285410-1285702:-1:exon

position:1285702:-1
position: 1285702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HDGF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: HDGF
product: heparin binding growth factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_032233801.1
SIO_010081: HDGF
subclass of: SO_0000673
so part of: HDGF
location: complement(join(1285410..1285702,1285855..1286126,1286212..1286415,1286814..1286952,1287211..1287287,1290589..1290965))
location: region:1285410-1290965:-1
so has part: feature:1290589-1290965:-1:exon
so has part: feature:1287211-1287287:-1:exon
so has part: feature:1286814-1286952:-1:exon
so has part: feature:1286212-1286415:-1:exon
so has part: feature:1285855-1286126:-1:exon
so has part: feature:1285410-1285702:-1:exon

position:1290965:-1
position: 1290965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1290589-1290965:-1:exon

position:1290589:-1
position: 1290589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1287211-1287287:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1286814-1286952:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1286212-1286415:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1285855-1286126:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1285410-1285702:-1:exon

HDGF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: HDGF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hepatoma-derived growth factor isoform X1
translation: MPSRLARAPSPPASSPPAGTLVQPRPRGSLPSLPIDEMPESAVKSTSNKYQVFFFGTHETAFLGAKDLFPYEECKAKFGKASKRKGFSEGLWEIENNPTIKASGYQPAQKKRPLEAGKAKGKLEAGRKGSPEGSSPEEEEEEEEEEEGDLVIDEQVREKNQKAAHKRRPPEAPQEPSAKRMKDGEDQAEAAGEKPGREDAAQEARGQKPALLKPGAEGKNGGGGSPPIDVLGGEEKKEKAAQGEEEEEEEEEEEEEEESRDHEKSP
SIO_010081: HDGF
subclass of: SO_0000673
so part of: HDGF
location: complement(join(1285696..1285702,1285855..1286126,1286212..1286415,1286814..1286952,1287211..1287287,1296587..1296688))
location: region:1285696-1296688:-1
so has part: feature:1296587-1296688:-1:exon
so has part: feature:1287211-1287287:-1:exon
so has part: feature:1286814-1286952:-1:exon
so has part: feature:1286212-1286415:-1:exon
so has part: feature:1285855-1286126:-1:exon
so has part: feature:1285696-1285702:-1:exon

XP_032089690.1
type: Protein
SIO_000068: ncbiprotein

position:1285696:-1
position: 1285696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1296688:-1
position: 1296688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1296587-1296688:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1287211-1287287:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1286814-1286952:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1286212-1286415:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1285855-1286126:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1285696-1285702:-1:exon

HDGF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: HDGF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hepatoma-derived growth factor isoform X2
translation: MSRSGRPRDYKSGDLVFAKMKGYPHWPARIDEMPESAVKSTSNKYQVFFFGTHETAFLGAKDLFPYEECKAKFGKASKRKGFSEGLWEIENNPTIKASGYQPAQKKRPLEAGKAKGKLEAGRKGSPEGSSPEEEEEEEEEEEGDLVIDEQVREKNQKAAHKRRPPEAPQEPSAKRMKDGEDQAEAAGEKPGREDAAQEARGQKPALLKPGAEGKNGGGGSPPIDVLGGEEKKEKAAQGEEEEEEEEEEEEEEESRDHEKSP
SIO_010081: HDGF
subclass of: SO_0000673
so part of: HDGF
location: complement(join(1285696..1285702,1285855..1286126,1286212..1286415,1286814..1286952,1287211..1287287,1290589..1290675))
location: region:1285696-1290675:-1
so has part: feature:1290589-1290675:-1:exon
so has part: feature:1287211-1287287:-1:exon
so has part: feature:1286814-1286952:-1:exon
so has part: feature:1286212-1286415:-1:exon
so has part: feature:1285855-1286126:-1:exon
so has part: feature:1285696-1285702:-1:exon

XP_032089692.1
type: Protein
SIO_000068: ncbiprotein

position:1290675:-1
position: 1290675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1290589-1290675:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1287211-1287287:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1286814-1286952:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1286212-1286415:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1285855-1286126:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1285696-1285702:-1:exon

PRCC
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: PRCC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1291077..1294269
location: region:1291077-1294269:1
so has part: feature:1291077-1294269:1:exon
subclass of: SO_0000010

116519771
type: Gene
SIO_000068: ncbigene

position:1291077:1
position: 1291077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1294269:1
position: 1294269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1291077-1294269:1:exon

PRCC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: PRCC
product: proline rich mitotic checkpoint control factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_032233798.1
SIO_010081: PRCC
subclass of: SO_0000673
so part of: PRCC
location: join(1291077..1291911,1291986..1292423,1292517..1292621,1292770..1292913,1292999..1293064,1293168..1294269)
location: region:1291077-1294269:1
so has part: feature:1291077-1291911:1:exon
so has part: feature:1291986-1292423:1:exon
so has part: feature:1292517-1292621:1:exon
so has part: feature:1292770-1292913:1:exon
so has part: feature:1292999-1293064:1:exon
so has part: feature:1293168-1294269:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1291077-1291911:1:exon

position:1291911:1
position: 1291911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1291986-1292423:1:exon

position:1291986:1
position: 1291986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1292423:1
position: 1292423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1292517-1292621:1:exon

position:1292517:1
position: 1292517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1292621:1
position: 1292621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1292770-1292913:1:exon

position:1292770:1
position: 1292770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1292913:1
position: 1292913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1292999-1293064:1:exon

position:1292999:1
position: 1292999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1293064:1
position: 1293064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1293168-1294269:1:exon

position:1293168:1
position: 1293168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PRCC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: PRCC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-rich protein PRCC
translation: MSLVAYASSEEEREEEEEEEEEEEEEGEKAPGGPRGLLSVLPPARPSPAPKRPPVRIPAPRLPEKSDSEEEEEEEEPAPKKPSRLGGLSALLPQPRRGAPQPRRADPAAPPSPSAIKAAAKSAARQVARQVAQEGEAEPPQPFFPRPPPAPGPPAAPAPPVAFPDDLPPGTEPDGQDGADAPLEFKTPPGARPAPPGWPPAPAPEYGAPYAGYYGGGYYPENEPGLGPPPEGSADAAPASFMDDEAFKRLQGKRNRGREEISFVEIRGDDQLSGVQQWLTKSLTEEQGMKSFSKKKGEQPTGQQRRKHQITYLIHQAKERELELKNSWAENKLSRRQTQAKYGF
SIO_010081: PRCC
subclass of: SO_0000673
so part of: PRCC
location: join(1291717..1291911,1291986..1292423,1292517..1292621,1292770..1292913,1292999..1293064,1293168..1293254)
location: region:1291717-1293254:1
so has part: feature:1291717-1291911:1:exon
so has part: feature:1291986-1292423:1:exon
so has part: feature:1292517-1292621:1:exon
so has part: feature:1292770-1292913:1:exon
so has part: feature:1292999-1293064:1:exon
so has part: feature:1293168-1293254:1:exon

XP_032089689.1
type: Protein
SIO_000068: ncbiprotein

position:1291717:1
position: 1291717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1293254:1
position: 1293254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1291717-1291911:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1291986-1292423:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1292517-1292621:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1292770-1292913:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1292999-1293064:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1293168-1293254:1:exon

LOC116519770
type: Gene
subclass of: SO_0000704
RO_0002162: 35005
gene: LOC116519770
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1294757..1301273
location: region:1294757-1301273:1
so has part: feature:1294757-1301273:1:exon
subclass of: SO_0000010

116519770
type: Gene
SIO_000068: ncbigene

position:1294757:1
position: 1294757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1301273:1
position: 1301273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1294757-1301273:1:exon

LOC116519770
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: LOC116519770
product: death-associated protein kinase 2-like, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_032233797.1
SIO_010081: LOC116519770
subclass of: SO_0000673
so part of: LOC116519770
location: join(1294757..1295118,1297324..1297383,1297820..1297950,1298153..1298374,1298497..1298635,1298728..1298857,1299033..1299081,1299394..1299420,1299707..1299859,1300133..1300178,1300271..1300360,1300487..1300567,1300676..1301273)
location: region:1294757-1301273:1
so has part: feature:1294757-1295118:1:exon
so has part: feature:1297324-1297383:1:exon
so has part: feature:1297820-1297950:1:exon
so has part: feature:1298153-1298374:1:exon
so has part: feature:1298497-1298635:1:exon
so has part: feature:1298728-1298857:1:exon
so has part: feature:1299033-1299081:1:exon
so has part: feature:1299394-1299420:1:exon
so has part: feature:1299707-1299859:1:exon
so has part: feature:1300133-1300178:1:exon
so has part: feature:1300271-1300360:1:exon
so has part: feature:1300487-1300567:1:exon
so has part: feature:1300676-1301273:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1294757-1295118:1:exon

position:1295118:1
position: 1295118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1297324-1297383:1:exon

position:1297324:1
position: 1297324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1297383:1
position: 1297383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1297820-1297950:1:exon

position:1297820:1
position: 1297820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1297950:1
position: 1297950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1298153-1298374:1:exon

position:1298153:1
position: 1298153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1298374:1
position: 1298374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1298497-1298635:1:exon

position:1298497:1
position: 1298497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1298635:1
position: 1298635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1298728-1298857:1:exon

position:1298728:1
position: 1298728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1298857:1
position: 1298857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1299033-1299081:1:exon

position:1299033:1
position: 1299033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1299081:1
position: 1299081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1299394-1299420:1:exon

position:1299394:1
position: 1299394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1299420:1
position: 1299420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1299707-1299859:1:exon

position:1299707:1
position: 1299707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1299859:1
position: 1299859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1300133-1300178:1:exon

position:1300133:1
position: 1300133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1300178:1
position: 1300178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1300271-1300360:1:exon

position:1300271:1
position: 1300271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1300360:1
position: 1300360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1300487-1300567:1:exon

position:1300487:1
position: 1300487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1300567:1
position: 1300567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1300676-1301273:1:exon

position:1300676:1
position: 1300676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116519770
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: LOC116519770
product: death-associated protein kinase 2-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_032233787.1
SIO_010081: LOC116519770
subclass of: SO_0000673
so part of: LOC116519770
location: join(1294765..1295118,1297324..1297383,1297820..1297950,1298153..1298374,1298497..1298635,1298728..1298857,1299033..1299081,1299394..1299420,1299707..1299859,1300133..1300178,1300271..1300360,1300487..1300579,1300676..1301273)
location: region:1294765-1301273:1
so has part: feature:1294765-1295118:1:exon
so has part: feature:1297324-1297383:1:exon
so has part: feature:1297820-1297950:1:exon
so has part: feature:1298153-1298374:1:exon
so has part: feature:1298497-1298635:1:exon
so has part: feature:1298728-1298857:1:exon
so has part: feature:1299033-1299081:1:exon
so has part: feature:1299394-1299420:1:exon
so has part: feature:1299707-1299859:1:exon
so has part: feature:1300133-1300178:1:exon
so has part: feature:1300271-1300360:1:exon
so has part: feature:1300487-1300579:1:exon
so has part: feature:1300676-1301273:1:exon

position:1294765:1
position: 1294765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1294765-1295118:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1297324-1297383:1:exon

urn:…
SIO_000300: 3
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SIO_000300: 4
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urn:…
SIO_000300: 5
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urn:…
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urn:…
SIO_000300: 7
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urn:…
SIO_000300: 11
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urn:…
SIO_000300: 12
SIO_000628: feature:1300487-1300579:1:exon

position:1300579:1
position: 1300579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1300676-1301273:1:exon

LOC116519770
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: LOC116519770
product: death-associated protein kinase 2-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_032233794.1
SIO_010081: LOC116519770
subclass of: SO_0000673
so part of: LOC116519770
location: join(1295026..1295122,1297324..1297383,1297820..1297950,1298153..1298374,1298497..1298635,1298728..1298857,1299033..1299081,1299394..1299420,1299707..1299859,1300133..1300178,1300271..1300360,1300487..1300579,1300676..1301273)
location: region:1295026-1301273:1
so has part: feature:1295026-1295122:1:exon
so has part: feature:1297324-1297383:1:exon
so has part: feature:1297820-1297950:1:exon
so has part: feature:1298153-1298374:1:exon
so has part: feature:1298497-1298635:1:exon
so has part: feature:1298728-1298857:1:exon
so has part: feature:1299033-1299081:1:exon
so has part: feature:1299394-1299420:1:exon
so has part: feature:1299707-1299859:1:exon
so has part: feature:1300133-1300178:1:exon
so has part: feature:1300271-1300360:1:exon
so has part: feature:1300487-1300579:1:exon
so has part: feature:1300676-1301273:1:exon

position:1295026:1
position: 1295026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1295026-1295122:1:exon

position:1295122:1
position: 1295122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
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urn:…
SIO_000300: 3
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SIO_000300: 4
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SIO_000300: 5
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SIO_000300: 6
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SIO_000300: 7
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SIO_000300: 8
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SIO_000300: 9
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SIO_000300: 10
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SIO_000300: 11
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urn:…
SIO_000300: 12
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urn:…
SIO_000300: 13
SIO_000628: feature:1300676-1301273:1:exon

LOC116519770
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: LOC116519770
product: death-associated protein kinase 2-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_032233792.1
SIO_010081: LOC116519770
subclass of: SO_0000673
so part of: LOC116519770
location: join(1296129..1296287,1297324..1297383,1297820..1297950,1298153..1298374,1298497..1298635,1298728..1298857,1299033..1299081,1299394..1299420,1299707..1299859,1300133..1300178,1300271..1300360,1300487..1300579,1300676..1301273)
location: region:1296129-1301273:1
so has part: feature:1296129-1296287:1:exon
so has part: feature:1297324-1297383:1:exon
so has part: feature:1297820-1297950:1:exon
so has part: feature:1298153-1298374:1:exon
so has part: feature:1298497-1298635:1:exon
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so has part: feature:1299707-1299859:1:exon
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so has part: feature:1300487-1300579:1:exon
so has part: feature:1300676-1301273:1:exon

position:1296129:1
position: 1296129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1296129-1296287:1:exon

position:1296287:1
position: 1296287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
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urn:…
SIO_000300: 3
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SIO_000300: 4
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urn:…
SIO_000300: 12
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urn:…
SIO_000300: 13
SIO_000628: feature:1300676-1301273:1:exon

LOC116519770
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: LOC116519770
product: death-associated protein kinase 2-like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_032233796.1
SIO_010081: LOC116519770
subclass of: SO_0000673
so part of: LOC116519770
location: join(1296294..1296508,1297324..1297383,1297820..1297950,1298153..1298374,1298497..1298635,1298728..1298857,1299033..1299081,1299394..1299420,1299707..1299859,1300133..1300178,1300271..1300360,1300487..1300579,1300676..1301273)
location: region:1296294-1301273:1
so has part: feature:1296294-1296508:1:exon
so has part: feature:1297324-1297383:1:exon
so has part: feature:1297820-1297950:1:exon
so has part: feature:1298153-1298374:1:exon
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so has part: feature:1300271-1300360:1:exon
so has part: feature:1300487-1300579:1:exon
so has part: feature:1300676-1301273:1:exon

position:1296294:1
position: 1296294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1296294-1296508:1:exon

position:1296508:1
position: 1296508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1297324-1297383:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1297820-1297950:1:exon

urn:…
SIO_000300: 4
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SIO_000300: 5
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SIO_000300: 6
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SIO_000300: 7
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SIO_000300: 8
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SIO_000300: 9
SIO_000628: feature:1299707-1299859:1:exon

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SIO_000300: 10
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SIO_000300: 11
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urn:…
SIO_000300: 12
SIO_000628: feature:1300487-1300579:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1300676-1301273:1:exon

LOC116519770
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: LOC116519770
product: death-associated protein kinase 2-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_032233795.1
SIO_010081: LOC116519770
subclass of: SO_0000673
so part of: LOC116519770
location: join(1296617..1296699,1297324..1297383,1297820..1297950,1298153..1298374,1298497..1298635,1298728..1298857,1299033..1299081,1299394..1299420,1299707..1299859,1300133..1300178,1300271..1300360,1300487..1300579,1300676..1301273)
location: region:1296617-1301273:1
so has part: feature:1296617-1296699:1:exon
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so has part: feature:1300271-1300360:1:exon
so has part: feature:1300487-1300579:1:exon
so has part: feature:1300676-1301273:1:exon

position:1296617:1
position: 1296617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1296617-1296699:1:exon

position:1296699:1
position: 1296699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1297324-1297383:1:exon

urn:…
SIO_000300: 3
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SIO_000300: 4
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SIO_000300: 7
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SIO_000300: 8
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SIO_000300: 9
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SIO_000300: 11
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urn:…
SIO_000300: 12
SIO_000628: feature:1300487-1300579:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1300676-1301273:1:exon

LOC116519770
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: LOC116519770
product: death-associated protein kinase 2-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_032233793.1
SIO_010081: LOC116519770
subclass of: SO_0000673
so part of: LOC116519770
location: join(1296729..1296817,1297324..1297383,1297820..1297950,1298153..1298374,1298497..1298635,1298728..1298857,1299033..1299081,1299394..1299420,1299707..1299859,1300133..1300178,1300271..1300360,1300487..1300579,1300676..1301273)
location: region:1296729-1301273:1
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so has part: feature:1300676-1301273:1:exon

position:1296729:1
position: 1296729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1296729-1296817:1:exon

position:1296817:1
position: 1296817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1297324-1297383:1:exon

urn:…
SIO_000300: 3
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SIO_000300: 4
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SIO_000300: 5
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SIO_000300: 6
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SIO_000300: 7
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SIO_000300: 8
SIO_000628: feature:1299394-1299420:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1299707-1299859:1:exon

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SIO_000300: 10
SIO_000628: feature:1300133-1300178:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1300271-1300360:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1300487-1300579:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1300676-1301273:1:exon

LOC116519770
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 35005
gene: LOC116519770
product: death-associated protein kinase 2-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_032233791.1
SIO_010081: LOC116519770
subclass of: SO_0000673
so part of: LOC116519770
location: join(1296892..1296975,1297324..1297383,1297820..1297950,1298153..1298374,1298497..1298635,1298728..1298857,1299033..1299081,1299394..1299420,1299707..1299859,1300133..1300178,1300271..1300360,1300487..1300579,1300676..1301273)
location: region:1296892-1301273:1
so has part: feature:1296892-1296975:1:exon
so has part: feature:1297324-1297383:1:exon
so has part: feature:1297820-1297950:1:exon
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so has part: feature:1300487-1300579:1:exon
so has part: feature:1300676-1301273:1:exon

position:1296892:1
position: 1296892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1296892-1296975:1:exon

position:1296975:1
position: 1296975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1297324-1297383:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1297820-1297950:1:exon

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SIO_000300: 4
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urn:…
SIO_000300: 5
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SIO_000300: 6
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SIO_000300: 7
SIO_000628: feature:1299033-1299081:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1299394-1299420:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1299707-1299859:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1300133-1300178:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1300271-1300360:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1300487-1300579:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1300676-1301273:1:exon

LOC116519770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: LOC116519770
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: death-associated protein kinase 2-like isoform X1
translation: MARDGTEACPGHPGAAGIQEPPCSLEDDEVFLGTEARTSATQADPFRHCSVEELYQLLETLGSGHFGVVRRCQERSTGVFYAAKSVKVRKRKGSRLGLEREQVEREVRILQQLQHPNIMRLYDVFANQAEMVLILELILGGELFDFIAEKELLSEDEAIEFLQQILLGLAYMHGLHIAHFDLKPENIMLLEKGVPKAKIKIIDFGLAQKLQEGVAFKSLCGTPQYIAPEVINYEALSTATDMWSIGVITYILLSGTSPFQGEKDEETLCNVVSGNYEFEARYFSQTSEMAKDFIQKLLLKEPRDRMTAAECLLHPWIKPLTRKQAVNRSRSSINMKNFRKFNARRKWKLSYNMVSACNRFCRLQLLCQQQKPDEEVTALRDCESDQEDQPSSPGVLLRRRRSICS
SIO_010081: LOC116519770
subclass of: SO_0000673
so part of: LOC116519770
location: join(1297327..1297383,1297820..1297950,1298153..1298374,1298497..1298635,1298728..1298857,1299033..1299081,1299394..1299420,1299707..1299859,1300133..1300178,1300271..1300360,1300487..1300579,1300676..1300756)
location: region:1297327-1300756:1
so has part: feature:1297327-1297383:1:exon
so has part: feature:1297820-1297950:1:exon
so has part: feature:1298153-1298374:1:exon
so has part: feature:1298497-1298635:1:exon
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so has part: feature:1299033-1299081:1:exon
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so has part: feature:1299707-1299859:1:exon
so has part: feature:1300133-1300178:1:exon
so has part: feature:1300271-1300360:1:exon
so has part: feature:1300487-1300579:1:exon
so has part: feature:1300676-1300756:1:exon

XP_032089678.1
type: Protein
SIO_000068: ncbiprotein

position:1297327:1
position: 1297327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1300756:1
position: 1300756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1297327-1297383:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1297820-1297950:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1298153-1298374:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1298497-1298635:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1298728-1298857:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1299033-1299081:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1299394-1299420:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1299707-1299859:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1300133-1300178:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1300271-1300360:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1300487-1300579:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1300676-1300756:1:exon

LOC116519770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 35005
gene: LOC116519770
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: death-associated protein kinase 2-like isoform X1
translation: MARDGTEACPGHPGAAGIQEPPCSLEDDEVFLGTEARTSATQADPFRHCSVEELYQLLETLGSGHFGVVRRCQERSTGVFYAAKSVKVRKRKGSRLGLEREQVEREVRILQQLQHPNIMRLYDVFANQAEMVLILELILGGELFDFIAEKELLSEDEAIEFLQQILLGLAYMHGLHIAHFDLKPENIMLLEKGVPKAKIKIIDFGLAQKLQEGVAFKSLCGTPQYIAPEVINYEALSTATDMWSIGVITYILLSGTSPFQGEKDEETLCNVVSGNYEFEARYFSQTSEMAKDFIQKLLLKEPRDRMTAAECLLHPWIKPLTRKQAVNRSRSSINMKNFRKFNARRKWKLSYNMVSACNRFCRLQLLCQQQKPDEEVTALRDCESDQEDQPSSPGVLLRRRRSICS
SIO_010081: LOC116519770
subclass of: SO_0000673
so part of: LOC116519770
location: join(1297327..1297383,1297820..1297950,1298153..1298374,1298497..1298635,1298728..1298857,1299033..1299081,1299394..1299420,1299707..1299859,1300133..1300178,1300271..1300360,1300487..1300579,1300676..1300756)
location: region:1297327-1300756:1
so has part: feature:1297327-1297383:1:exon
so has part: feature:1297820-1297950:1:exon
so has part: feature:1298153-1298374:1:exon
so has part: feature:1298497-1298635:1:exon
so has part: feature:1298728-1298857:1:exon
so has part: feature:1299033-1299081:1:exon
so has part: feature:1299394-1299420:1:exon
so has part: feature:1299707-1299859:1:exon
so has part: feature:1300133-1300178:1:exon
so has part: feature:1300271-1300360:1:exon
so has part: feature:1300487-1300579:1:exon
so has part: feature:1300676-1300756:1:exon

XP_032089682.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1297327-1297383:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1297820-1297950:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1298153-1298374:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1298497-1298635:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1298728-1298857:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1299033-1299081:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1299394-1299420:1:exon