Natronorubrum aibiense strain 7-3 plasmid unnamed3.
Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.
Natronorubrum sulfidifaciens sp. nov., an extremely haloalkaliphilic archaeon isolated from Aiding salt lake in Xin-Jiang, China
Int J Syst Evol Microbiol 57 (Pt 4), 738-740 (2007)
Submitted (18-OCT-2019) School of Food and Biological Engineering, Jiangsu University, 301 Xuefu Road, Zhenjiang 212013, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP045491.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. 4\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 25.0x\nSequencing Technology :: PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 11/01/2022 05:31:30\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 4,300\nCDSs (total) :: 4,229\nGenes (coding) :: 4,103\nCDSs (with protein) :: 4,103\nGenes (RNA) :: 71\nrRNAs :: 7, 5, 5 (5S, 16S, 23S)\ncomplete rRNAs :: 7, 5, 5 (5S, 16S, 23S)\ntRNAs :: 52\nncRNAs :: 2\nPseudo Genes (total) :: 126\nCDSs (without protein) :: 126\nPseudo Genes (ambiguous residues) :: 0 of 126\nPseudo Genes (frameshifted) :: 69 of 126\nPseudo Genes (incomplete) :: 76 of 126\nPseudo Genes (internal stop) :: 29 of 126\nPseudo Genes (multiple problems) :: 47 of 126\n##Genome-Annotation-Data-END##
COORDINATES: similar to AA sequence:RefSeq:WP_008895550.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008158979.1
COORDINATES: similar to AA sequence:RefSeq:WP_008158981.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_012942033.1
COORDINATES: similar to AA sequence:RefSeq:WP_006067313.1
COORDINATES: similar to AA sequence:RefSeq:WP_008454090.1
COORDINATES: similar to AA sequence:RefSeq:WP_008159004.1
LLM class flavin-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_008454092.1
enoyl-CoA hydratase/isomerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008159007.1
acyl CoA:acetate/3-ketoacid CoA transferase
COORDINATES: similar to AA sequence:RefSeq:WP_007107456.1
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008159009.1
GO:0070403 - NAD+ binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006600551.1
beta-ketoacyl synthase N-terminal-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008159011.1
COORDINATES: similar to AA sequence:RefSeq:WP_008159012.1
COORDINATES: similar to AA sequence:RefSeq:WP_008159015.1
COORDINATES: similar to AA sequence:RefSeq:WP_006089628.1
COORDINATES: similar to AA sequence:RefSeq:WP_006078421.1
GO:0018784 - (S)-2-haloacid dehalogenase activity [Evidence IEA]
GO:0006805 - xenobiotic metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006089626.1
COORDINATES: similar to AA sequence:RefSeq:WP_008159021.1
COORDINATES: similar to AA sequence:RefSeq:WP_006067328.1
COORDINATES: similar to AA sequence:RefSeq:WP_012945420.1
COORDINATES: similar to AA sequence:RefSeq:WP_005578658.1
COORDINATES: similar to AA sequence:RefSeq:WP_008159029.1
COORDINATES: similar to AA sequence:RefSeq:WP_007108084.1
cobalamin B12-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006429594.1
GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO:1903826 - L-arginine transmembrane transport [Evidence IEA]; GO:0015819 - lysine transport [Evidence IEA]; GO:0015822 - ornithine transport [Evidence IEA]
methylmalonyl Co-A mutase-associated GTPase MeaB
COORDINATES: similar to AA sequence:RefSeq:WP_006089618.1
COORDINATES: similar to AA sequence:RefSeq:WP_008159041.1
MaoC/PaaZ C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007109101.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012946001.1
COORDINATES: similar to AA sequence:RefSeq:WP_008159046.1
COORDINATES: similar to AA sequence:RefSeq:WP_006067339.1
COORDINATES: similar to AA sequence:RefSeq:WP_008159049.1
GO:0004765 - shikimate kinase activity [Evidence IEA]
GO:0009423 - chorismate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006091113.1
COORDINATES: similar to AA sequence:RefSeq:WP_012946008.1
dicarboxylate/amino acid:cation symporter
COORDINATES: similar to AA sequence:RefSeq:WP_006067349.1
COORDINATES: similar to AA sequence:RefSeq:WP_006067350.1
COORDINATES: similar to AA sequence:RefSeq:WP_006091009.1
cob(I)yrinic acid a,c-diamide adenosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014863655.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006067353.1
COORDINATES: similar to AA sequence:RefSeq:WP_006067354.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006184395.1
COORDINATES: similar to AA sequence:RefSeq:WP_005558966.1
GO:0033744 - L-methionine:thioredoxin-disulfide S-oxidoreductase activity [Evidence IEA]; GO:0008113 - peptide-methionine (S)-S-oxide reductase activity [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
peptide-methionine (S)-S-oxide reductase MsrA
COORDINATES: similar to AA sequence:RefSeq:WP_008895623.1
GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008159064.1
2,5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_006067360.1
COORDINATES: similar to AA sequence:RefSeq:WP_008159066.1
GO:0055085 - transmembrane transport [Evidence IEA]
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006091043.1
COORDINATES: similar to AA sequence:RefSeq:WP_006431234.1
COORDINATES: similar to AA sequence:RefSeq:WP_006179771.1
COORDINATES: similar to AA sequence:RefSeq:WP_006067365.1
COORDINATES: similar to AA sequence:RefSeq:WP_006067366.1
COORDINATES: similar to AA sequence:RefSeq:WP_008159073.1
COORDINATES: similar to AA sequence:RefSeq:WP_006067368.1
COORDINATES: similar to AA sequence:RefSeq:WP_006091051.1
GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
GO:0006542 - glutamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008453677.1
COORDINATES: similar to AA sequence:RefSeq:WP_014863792.1
COORDINATES: similar to AA sequence:RefSeq:WP_006091055.1
COORDINATES: similar to AA sequence:RefSeq:WP_012946054.1
COORDINATES: similar to AA sequence:RefSeq:WP_008011962.1
COORDINATES: similar to AA sequence:RefSeq:WP_006091059.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0003979 - UDP-glucose 6-dehydrogenase activity [Evidence IEA]
GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008159088.1
COORDINATES: similar to AA sequence:RefSeq:WP_006179581.1
DegT/DnrJ/EryC1/StrS aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006184455.1
COORDINATES: similar to AA sequence:RefSeq:WP_014863596.1
COORDINATES: similar to AA sequence:RefSeq:WP_007142941.1
COORDINATES: similar to AA sequence:RefSeq:WP_008895651.1
COORDINATES: similar to AA sequence:RefSeq:WP_007109246.1
COORDINATES: similar to AA sequence:RefSeq:WP_006168842.1
COORDINATES: similar to AA sequence:RefSeq:WP_008453245.1
COORDINATES: similar to AA sequence:RefSeq:WP_007976420.1
COORDINATES: similar to AA sequence:RefSeq:WP_006067386.1
COORDINATES: similar to AA sequence:RefSeq:WP_006672734.1
COORDINATES: similar to AA sequence:RefSeq:WP_006431464.1
NAD-dependent epimerase/dehydratase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012946038.1
GO:0004038 - allantoinase activity [Evidence IEA]; GO:0050897 - cobalt ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0000256 - allantoin catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008158771.1
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006067393.1
COORDINATES: similar to AA sequence:RefSeq:WP_012946036.1
GO:0004152 - dihydroorotate dehydrogenase activity [Evidence IEA]
GO:0006222 - UMP biosynthetic process [Evidence IEA]
quinone-dependent dihydroorotate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_006650390.1
COORDINATES: similar to AA sequence:RefSeq:WP_008158781.1
COORDINATES: similar to AA sequence:RefSeq:WP_006650392.1
CaiB/BaiF CoA-transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008158790.1
COORDINATES: similar to AA sequence:RefSeq:WP_004267806.1
COORDINATES: similar to AA sequence:RefSeq:WP_006067402.1
(2Fe-2S) ferredoxin domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006091084.1
COORDINATES: similar to AA sequence:RefSeq:WP_004972120.1
COORDINATES: similar to AA sequence:RefSeq:WP_006091086.1
monovalent cation/H+ antiporter subunit E
COORDINATES: similar to AA sequence:RefSeq:WP_006663831.1
COORDINATES: similar to AA sequence:RefSeq:WP_008158802.1
GO:0005451 - monovalent cation:proton antiporter activity [Evidence IEA]
GO:0098662 - inorganic cation transmembrane transport [Evidence IEA]; GO:1902600 - proton transmembrane transport [Evidence IEA]
monovalent cation/H(+) antiporter subunit G
COORDINATES: similar to AA sequence:RefSeq:WP_007109263.1
COORDINATES: similar to AA sequence:RefSeq:WP_008012006.1
COORDINATES: similar to AA sequence:RefSeq:WP_012946024.1
COORDINATES: similar to AA sequence:RefSeq:WP_006184482.1
proton-conducting transporter membrane subunit
COORDINATES: similar to AA sequence:RefSeq:WP_008012009.1
COORDINATES: similar to AA sequence:RefSeq:WP_008453202.1
COORDINATES: similar to AA sequence:RefSeq:WP_008158816.1
COORDINATES: similar to AA sequence:RefSeq:WP_008415699.1
COORDINATES: similar to AA sequence:RefSeq:WP_008415700.1
COORDINATES: similar to AA sequence:RefSeq:WP_007109271.1
COORDINATES: similar to AA sequence:RefSeq:WP_007261555.1
COORDINATES: similar to AA sequence:RefSeq:WP_006091105.1
winged helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006179534.1
COORDINATES: similar to AA sequence:RefSeq:WP_008453185.1
COORDINATES: similar to AA sequence:RefSeq:WP_006650739.1
COORDINATES: similar to AA sequence:RefSeq:WP_013880501.1
COORDINATES: similar to AA sequence:RefSeq:WP_007997745.1
serine hydrolase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008158839.1
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006179649.1
COORDINATES: similar to AA sequence:RefSeq:WP_007261525.1
COORDINATES: similar to AA sequence:RefSeq:WP_008158845.1
COORDINATES: similar to AA sequence:RefSeq:WP_008158847.1
COORDINATES: similar to AA sequence:RefSeq:WP_008895605.1
COORDINATES: similar to AA sequence:RefSeq:WP_006067254.1
GO:0004805 - trehalose-phosphatase activity [Evidence IEA]
GO:0005992 - trehalose biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008158853.1
COORDINATES: similar to AA sequence:RefSeq:WP_008895602.1
COORDINATES: similar to AA sequence:RefSeq:WP_006184412.1
orc1/cdc6 family replication initiation protein
COORDINATES: similar to AA sequence:RefSeq:WP_008453330.1
COORDINATES: similar to AA sequence:RefSeq:WP_006090963.1
COORDINATES: similar to AA sequence:RefSeq:WP_006090961.1
COORDINATES: similar to AA sequence:RefSeq:WP_006649500.1
COORDINATES: similar to AA sequence:RefSeq:WP_006067244.1
PGF-CTERM sorting domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006067243.1
Lrp/AsnC family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_004059941.1
catalyzes the ATP-dependent carboxylation of a covalently attached biotin and the transfer of the carboxyl group to pyruvate forming oxaloacetate; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
acetyl-CoA carboxylase biotin carboxylase subunit
COORDINATES: similar to AA sequence:RefSeq:WP_004216084.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006089761.1
COORDINATES: similar to AA sequence:RefSeq:WP_006067239.1
GO:0009317 - acetyl-CoA carboxylase complex [Evidence IEA]
GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006067238.1
biotin-dependent carboxyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008158891.1
carboxyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014864157.1
COORDINATES: similar to AA sequence:RefSeq:WP_008158896.1
COORDINATES: similar to AA sequence:RefSeq:WP_008158898.1
protein sorting system archaetidylserine decarboxylase
COORDINATES: similar to AA sequence:RefSeq:WP_015322567.1
COORDINATES: similar to AA sequence:RefSeq:WP_006090932.1
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007261491.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006067260.1
COORDINATES: similar to AA sequence:RefSeq:WP_006654419.1
COORDINATES: similar to AA sequence:RefSeq:WP_006090907.1
COORDINATES: similar to AA sequence:RefSeq:WP_008453299.1
COORDINATES: similar to AA sequence:RefSeq:WP_006067264.1
COORDINATES: similar to AA sequence:RefSeq:WP_008158910.1
COORDINATES: similar to AA sequence:RefSeq:WP_006090900.1
COORDINATES: similar to AA sequence:RefSeq:WP_004267817.1
COORDINATES: similar to AA sequence:RefSeq:WP_006663843.1
COORDINATES: similar to AA sequence:RefSeq:WP_006067270.1
COORDINATES: similar to AA sequence:RefSeq:WP_007142968.1
COORDINATES: similar to AA sequence:RefSeq:WP_006650350.1
COORDINATES: protein motif:HMM:NF024927.2
COORDINATES: similar to AA sequence:RefSeq:WP_006673517.1
COORDINATES: similar to AA sequence:RefSeq:WP_006654816.1
COORDINATES: similar to AA sequence:RefSeq:WP_006067279.1
COORDINATES: similar to AA sequence:RefSeq:WP_006067280.1
COORDINATES: similar to AA sequence:RefSeq:WP_006109313.1
COORDINATES: similar to AA sequence:RefSeq:WP_008158931.1
COORDINATES: similar to AA sequence:RefSeq:WP_008158932.1
polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005575596.1
COORDINATES: similar to AA sequence:RefSeq:WP_008158934.1
COORDINATES: similar to AA sequence:RefSeq:WP_008158936.1
GO:0008761 - UDP-N-acetylglucosamine 2-epimerase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
COORDINATES: similar to AA sequence:RefSeq:WP_006431438.1
COORDINATES: similar to AA sequence:RefSeq:WP_008895568.1
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008158942.1
COORDINATES: similar to AA sequence:RefSeq:WP_006090895.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214728.1
COORDINATES: similar to AA sequence:RefSeq:WP_006067295.1
COORDINATES: similar to AA sequence:RefSeq:WP_008158950.1
COORDINATES: similar to AA sequence:RefSeq:WP_006067297.1
COORDINATES: similar to AA sequence:RefSeq:WP_008158955.1
COORDINATES: similar to AA sequence:RefSeq:WP_008158957.1
COORDINATES: similar to AA sequence:RefSeq:WP_008158958.1
COORDINATES: similar to AA sequence:RefSeq:WP_006090882.1
COORDINATES: similar to AA sequence:RefSeq:WP_006108205.1
COORDINATES: similar to AA sequence:RefSeq:WP_014863628.1
GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
glutamine--fructose-6-phosphate transaminase (isomerizing)
COORDINATES: similar to AA sequence:RefSeq:WP_007142911.1
COORDINATES: similar to AA sequence:RefSeq:WP_008158967.1
COORDINATES: similar to AA sequence:RefSeq:WP_007142914.1
COORDINATES: similar to AA sequence:RefSeq:WP_004214703.1
COORDINATES: similar to AA sequence:RefSeq:WP_006827914.1
DegT/DnrJ/EryC1/StrS family aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_008158975.1