Falco cherrug isolate bFalChe1 chromosome 22, bFalChe1.pri, whole genome shotgun sequence.
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Falconiformes; Falconidae; Falco.
REFSEQ INFORMATION: The reference sequence is identical to\nCM042470.1.\nAssembly name: bFalChe1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2022/06/02. The original whole-genome shotgun project has the\naccession JAMOAL000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 14-DEC-2021\nAssembly Method :: Hifiasm v. 0.13.0; purge_dups v. 1.2.3;\n bionano solve v. 3.6.1; salsa2 v. 2.2\nAssembly Name :: bFalChe1.pri\nDiploid :: Principal Pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 35.49x\nSequencing Technology :: PacBio Sequel II HiFi; Arima Genomics\n Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Full annotation\nAnnotation Name :: GCF_023634085.1-RS_2023_04\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Best-placed RefSeq; Gnomon;\n cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 04/26/2023\n##Genome-Annotation-Data-END##
Farooq Omar Al-Ajli, Souq Waqif Falcon Hospital
vigilin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC106631057; Derived by automated computational analysis using gene prediction method: Gnomon.
COORDINATES: polyA evidence [ECO:0006239]
periaxin; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon.
homeodomain interacting protein kinase 4; Derived by automated computational analysis using gene prediction method: Gnomon.
homeodomain interacting protein kinase 4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
homeodomain-interacting protein kinase 4
phospholipase D family member 3; Derived by automated computational analysis using gene prediction method: Gnomon.
chromosome 22 C19orf47 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: uncharacterized protein C19orf47 homolog
AKT serine/threonine kinase 2; Derived by automated computational analysis using gene prediction method: Gnomon.
AKT serine/threonine kinase 2, transcript variant X1
AKT serine/threonine kinase 2, transcript variant X2
AKT serine/threonine kinase 2, transcript variant X3
RAC-beta serine/threonine-protein kinase
gastric inhibitory polypeptide receptor; Derived by automated computational analysis using gene prediction method: Gnomon.
outer mitochondrial membrane lipid metabolism regulator OPA3; Derived by automated computational analysis using gene prediction method: Gnomon.
outer mitochondrial membrane lipid metabolism regulator OPA3
vasodilator stimulated phosphoprotein; Derived by automated computational analysis using gene prediction method: Gnomon.
reticulon-1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
FosB proto-oncogene, AP-1 transcription factor subunit; Derived by automated computational analysis using gene prediction method: Gnomon.
FosB proto-oncogene, AP-1 transcription factor subunit
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
exocyst complex component 3 like 2; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
exocyst complex component 3-like protein 2
microtubule affinity regulating kinase 4; Derived by automated computational analysis using gene prediction method: Gnomon.
microtubule affinity regulating kinase 4
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 19 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: MAP/microtubule affinity-regulating kinase 4
creatine kinase, M-type; Derived by automated computational analysis using gene prediction method: Gnomon.