Falco cherrug isolate bFalChe1 chromosome 22, bFalChe1.pri, whole genome shotgun sequence.
type: Entry
definition: Falco cherrug isolate bFalChe1 chromosome 22, bFalChe1.pri, whole genome shotgun sequence.
sequence version: NC_073718.1
sequence date: 2023-05-02
sequence: sequence
division: CON
label: NC_073718.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA962077
dblink: SAMN28688204
keyword: WGS
keyword: RefSeq
source: Falco cherrug (Saker falcon)
organism: Falco cherrug
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Falconiformes; Falconidae; Falco.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM042470.1.\nAssembly name: bFalChe1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2022/06/02. The original whole-genome shotgun project has the\naccession JAMOAL000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 14-DEC-2021\nAssembly Method :: Hifiasm v. 0.13.0; purge_dups v. 1.2.3;\n bionano solve v. 3.6.1; salsa2 v. 2.2\nAssembly Name :: bFalChe1.pri\nDiploid :: Principal Pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 35.49x\nSequencing Technology :: PacBio Sequel II HiFi; Arima Genomics\n Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Full annotation\nAnnotation Name :: GCF_023634085.1-RS_2023_04\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Best-placed RefSeq; Gnomon;\n cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 04/26/2023\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 285481
topology: linear
so has quality: SO_0000987
location: 1..285481
location: region:1-285481:1
RO_0002162: 345164

NC_073718
type: RefSeq
SIO_000068: refseq

PRJNA962077
type: BioProject
SIO_000068: bioproject

SAMN28688204
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285481:1
position: 285481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-285481:1:source
so part of: sequence
organism: Falco cherrug
mol type: genomic DNA
isolate: bFalChe1
chromosome: 22
sex: female
tissue type: blood
dev stage: adult
country: Qatar: Doha
lat lon: 25.286106 N 51.534817 E
collection date: 2020-02-12
collected by: Farooq Omar Al-Ajli, Souq Waqif Falcon Hospital

345164
type: Taxonomy
SIO_000068: taxonomy

LOC114014280
type: Gene
subclass of: SO_0000704
RO_0002162: 345164
gene: LOC114014280
note: vigilin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(167461..183071)
location: region:167461-183071:-1
so has part: feature:167461-183071:-1:exon
subclass of: SO_0000010

114014280
type: Gene
SIO_000068: ncbigene

position:167461:-1
position: 167461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183071:-1
position: 183071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167461-183071:-1:exon

LOC114014280
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 345164
gene: LOC114014280
product: vigilin-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
transcript id: XM_055697983.1
SIO_010081: LOC114014280
subclass of: SO_0000673
so part of: LOC114014280
location: complement(join(167461..167700,167991..168122,168289..168375,168708..168821,169083..169163,170081..170140,171000..171104,171666..171773,171988..172196,173037..173252,173727..173933,175560..175781,176343..176375,181962..182203,182477..182681,182982..183071))
location: region:167461-183071:-1
so has part: feature:182982-183071:-1:exon
so has part: feature:182477-182681:-1:exon
so has part: feature:181962-182203:-1:exon
so has part: feature:176343-176375:-1:exon
so has part: feature:175560-175781:-1:exon
so has part: feature:173727-173933:-1:exon
so has part: feature:173037-173252:-1:exon
so has part: feature:171988-172196:-1:exon
so has part: feature:171666-171773:-1:exon
so has part: feature:171000-171104:-1:exon
so has part: feature:170081-170140:-1:exon
so has part: feature:169083-169163:-1:exon
so has part: feature:168708-168821:-1:exon
so has part: feature:168289-168375:-1:exon
so has part: feature:167991-168122:-1:exon
so has part: feature:167461-167700:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:182982-183071:-1:exon

position:182982:-1
position: 182982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:182477-182681:-1:exon

position:182477:-1
position: 182477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182681:-1
position: 182681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:181962-182203:-1:exon

position:181962:-1
position: 181962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182203:-1
position: 182203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:176343-176375:-1:exon

position:176343:-1
position: 176343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176375:-1
position: 176375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:175560-175781:-1:exon

position:175560:-1
position: 175560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175781:-1
position: 175781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:173727-173933:-1:exon

position:173727:-1
position: 173727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173933:-1
position: 173933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:173037-173252:-1:exon

position:173037:-1
position: 173037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173252:-1
position: 173252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:171988-172196:-1:exon

position:171988:-1
position: 171988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172196:-1
position: 172196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:171666-171773:-1:exon

position:171666:-1
position: 171666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171773:-1
position: 171773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:171000-171104:-1:exon

position:171000:-1
position: 171000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171104:-1
position: 171104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:170081-170140:-1:exon

position:170081:-1
position: 170081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170140:-1
position: 170140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:169083-169163:-1:exon

position:169083:-1
position: 169083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169163:-1
position: 169163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:168708-168821:-1:exon

position:168708:-1
position: 168708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168821:-1
position: 168821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:168289-168375:-1:exon

position:168289:-1
position: 168289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168375:-1
position: 168375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:167991-168122:-1:exon

position:167991:-1
position: 167991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168122:-1
position: 168122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:167461-167700:-1:exon

position:167700:-1
position: 167700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC114014280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 345164
gene: LOC114014280
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: vigilin-like
translation: MAGHRQTPPKMPTDEEANARPQPNSRLHHEGAPRFLSEEENWEHDDIELCRAGIIIYSIWVNPSFLEFCQEPRGGFQERQPDNTWPCSEPRDEPEDDPGCSGLCARLSAVLASGHSESSSAVLAEGSPEMAAGPDPVRYPEGVAQGGTRGMGAWTAPNTFSCHEDIVLPDSSPPWTLSEVQPIKASVITQVFHVPLEERKYKDMNQFGEGEQAKICLDIMRKTGAHLELSLAKDQGLSIVVSGKPEAVTKARKQIVARLQTQERASATVAIPKEHHCFVIGKKGERLQDLKLKTATKMQVPRPDDPSNQIKISGTKEGIEKARHEILLISAEQDKRAVERLDVEKVYHPFIAGPYNKLVRELMQDTGTRIDIPPPSVNKAEIVFSGEKEQLAQAVARVKKIYEEKKKKTTTLAVEVKKSQHKYVIGPKGNSLQEILEKTGVSVEIPATDRSSGTVILRGEPEKLGQALTDVYAKANSFTISSVSAPSWLHRFIIGKKGQNLAKITQQMPKVHIKFTGGEDNITLEGPTEDVHVAQEQIEAMLKELIHGMDYAIIKADHQFHRPLIIVEQKFHRTVIGQKAERVWEIREQFPEVIISFPDPAHKSDIVQLRGPKNEVEKCTEYTQKMVADLVENSFSISVPICKQFHKNIVGKGGANIKKIRKESNTKIDLPAKNSNSETVVITGKRANCEAAHHRILATQKELANSTEVEVSIPSKLHSSLIGAKGRFVRSIVEDCGGVHIHFPTKGSGSDSVIIRGPAQGVEKAKKELLHL
SIO_010081: LOC114014280
subclass of: SO_0000673
so part of: LOC114014280
location: complement(join(167491..167700,167991..168122,168289..168375,168708..168821,169083..169163,170081..170140,171000..171104,171666..171773,171988..172196,173037..173252,173727..173933,175560..175781,176343..176375,181962..182203,182477..182681,182982..183071))
location: region:167491-183071:-1
so has part: feature:182982-183071:-1:exon
so has part: feature:182477-182681:-1:exon
so has part: feature:181962-182203:-1:exon
so has part: feature:176343-176375:-1:exon
so has part: feature:175560-175781:-1:exon
so has part: feature:173727-173933:-1:exon
so has part: feature:173037-173252:-1:exon
so has part: feature:171988-172196:-1:exon
so has part: feature:171666-171773:-1:exon
so has part: feature:171000-171104:-1:exon
so has part: feature:170081-170140:-1:exon
so has part: feature:169083-169163:-1:exon
so has part: feature:168708-168821:-1:exon
so has part: feature:168289-168375:-1:exon
so has part: feature:167991-168122:-1:exon
so has part: feature:167491-167700:-1:exon

XP_055553958.1
type: Protein
SIO_000068: ncbiprotein

position:167491:-1
position: 167491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182982-183071:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:182477-182681:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:181962-182203:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:176343-176375:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:175560-175781:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:173727-173933:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:173037-173252:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:171988-172196:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:171666-171773:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:171000-171104:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:170081-170140:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:169083-169163:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:168708-168821:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:168289-168375:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:167991-168122:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:167491-167700:-1:exon

LOC106631057
type: Gene
subclass of: SO_0000704
RO_0002162: 345164
gene: LOC106631057
note: uncharacterized LOC106631057; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 189400..198579
location: region:189400-198579:1
so has part: feature:189400-198579:1:exon
subclass of: SO_0000011

106631057
type: Gene
SIO_000068: ncbigene

position:189400:1
position: 189400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198579:1
position: 198579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189400-198579:1:exon

LOC106631057
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 345164
nc RNA class: lncRNA
gene: LOC106631057
product: uncharacterized LOC106631057
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_008730055.1
SIO_010081: LOC106631057
subclass of: SO_0000673
so part of: LOC106631057
location: join(189400..190343,190713..190824,194878..194932,197497..198579)
location: region:189400-198579:1
so has part: feature:189400-190343:1:exon
so has part: feature:190713-190824:1:exon
so has part: feature:194878-194932:1:exon
so has part: feature:197497-198579:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:189400-190343:1:exon

position:190343:1
position: 190343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:190713-190824:1:exon

position:190713:1
position: 190713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190824:1
position: 190824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:194878-194932:1:exon

position:194878:1
position: 194878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194932:1
position: 194932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:197497-198579:1:exon

position:197497:1
position: 197497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PRX
type: Gene
subclass of: SO_0000704
RO_0002162: 345164
gene: PRX
note: periaxin; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 202315..205950
location: region:202315-205950:1
so has part: feature:202315-205950:1:exon
subclass of: SO_0000010

129734460
type: Gene
SIO_000068: ncbigene

position:202315:1
position: 202315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205950:1
position: 205950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202315-205950:1:exon

PRX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 345164
gene: PRX
product: periaxin
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XM_055697981.1
SIO_010081: PRX
subclass of: SO_0000673
so part of: PRX
location: join(202315..202382,202772..202880,202997..203120,203210..203397,204796..205950)
location: region:202315-205950:1
so has part: feature:202315-202382:1:exon
so has part: feature:202772-202880:1:exon
so has part: feature:202997-203120:1:exon
so has part: feature:203210-203397:1:exon
so has part: feature:204796-205950:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:202315-202382:1:exon

position:202382:1
position: 202382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:202772-202880:1:exon

position:202772:1
position: 202772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202880:1
position: 202880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:202997-203120:1:exon

position:202997:1
position: 202997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203120:1
position: 203120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:203210-203397:1:exon

position:203210:1
position: 203210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203397:1
position: 203397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:204796-205950:1:exon

position:204796:1
position: 204796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PRX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 345164
gene: PRX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: periaxin
translation: MTSPGGGNPPIPPMEEETELVELETAPEAGVRGITVARDRRGLYIAKAPRSLRTYQGDRLVSARIFFEGAPPEDVAQVLEGARSCKVSLCLQHRLPGTPSPLGGTRTSGEGHQGKVARLSIPILTPSKKPPLAPSTVSPAPASPVAVEFALPKLSKLVKSWSAAEPASTAASTPVLPAAEPKRPRATPSRLTVKEAAAGKTPVMELPPVKPEVSGTAVEVLAGPSTRLPAMEVAAPKVTMGLSLAGAVPPAAPQAKEPALRLPQLEVAVPALPLPAAILEPGTTITQPQISLGEGETPSNSRKGRGSPVLKTKLPSFGTATVEDKEGDAGTRGGFAGIRVPSITIAIPSTAVELVPELSVPKPELAIAGEQPRLEVKLPARRSESPPAAPARLTFLETAVPSIDIAVPRVGVGLALPAGASMAAAPGEGDATAMPDVAARFAKGLRKLSLELEPTAALPEVEIASPARLTGGHAGSRHQTQSTQIHPAAFWVVPHQAQNKQRW
SIO_010081: PRX
subclass of: SO_0000673
so part of: PRX
location: join(202836..202880,202997..203120,203210..203397,204796..205950)
location: region:202836-205950:1
so has part: feature:202836-202880:1:exon
so has part: feature:202997-203120:1:exon
so has part: feature:203210-203397:1:exon
so has part: feature:204796-205950:1:exon

XP_055553956.1
type: Protein
SIO_000068: ncbiprotein

position:202836:1
position: 202836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202836-202880:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:202997-203120:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:203210-203397:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:204796-205950:1:exon

HIPK4
type: Gene
subclass of: SO_0000704
RO_0002162: 345164
gene: HIPK4
note: homeodomain interacting protein kinase 4; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 207537..209948
location: region:207537-209948:1
so has part: feature:207537-209948:1:exon
subclass of: SO_0000010

102045853
type: Gene
SIO_000068: ncbigene

position:207537:1
position: 207537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209948:1
position: 209948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207537-209948:1:exon

HIPK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 345164
gene: HIPK4
product: homeodomain interacting protein kinase 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
transcript id: XM_027802938.2
SIO_010081: HIPK4
subclass of: SO_0000673
so part of: HIPK4
location: 207537..209948
location: region:207537-209948:1
so has part: feature:207537-209948:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:207537-209948:1:exon

HIPK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 345164
gene: HIPK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeodomain-interacting protein kinase 4
translation: MATLVVGAKCYDIVTMVRKGTFGEVAQARQRSTGEMVAVKMVKNEGHHGQVVKNELRLLQALQEVDTEKSHIVRFLESFSDGACTYLFFESLEQNLFDFQKQNKFLPLPVRHIRTITAQVLAALVKLRELSIIHTDLKPENIMLVDHASYPFRVKLVDFGSASIFNEVRHIKAPYIQSRFYRSPEILLGLPFCEKVDMWSLGCVVAELHLGWPLFPGINEYDQVRYICSTLGLPDHELLCAAQKTQSFFQQVPHPTGSWQLKPPGNETVKPMERRKYAFSSLDQLAAVNICPVSYPRQEMLAKHCDLHGMVELVKRMLTWDSHKRIVPSAALKHPFISLQLVKSKFEATQYYKLCQEDLRASHKDTSTAEIFPGMEKGAFIPRDRRGIQKVITQMDGLSLAEPAGDRGDKSQQDIRPIPTHYSTQQQQQHHQHPQVGPTAGKLIMLGGPRGWEQRSHCEGGVVVGSMMEQNLPGRPHTSSHAKVWL
SIO_010081: HIPK4
subclass of: SO_0000673
so part of: HIPK4
location: 207864..209324
location: region:207864-209324:1
so has part: feature:207864-209324:1:exon

XP_027658739.2
type: Protein
SIO_000068: ncbiprotein

position:207864:1
position: 207864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209324:1
position: 209324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207864-209324:1:exon

PLD3
type: Gene
subclass of: SO_0000704
RO_0002162: 345164
gene: PLD3
note: phospholipase D family member 3; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(210257..214525)
location: region:210257-214525:-1
so has part: feature:210257-214525:-1:exon
subclass of: SO_0000010

102046023
type: Gene
SIO_000068: ncbigene

position:210257:-1
position: 210257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214525:-1
position: 214525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210257-214525:-1:exon

PLD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 345164
gene: PLD3
product: phospholipase D family member 3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055697982.1
SIO_010081: PLD3
subclass of: SO_0000673
so part of: PLD3
location: complement(join(210257..210588,210691..210790,210866..211031,211100..211242,211327..211527,211686..211813,211896..212016,212150..212333,212415..212554,212708..212758,213105..213178,214382..214525))
location: region:210257-214525:-1
so has part: feature:214382-214525:-1:exon
so has part: feature:213105-213178:-1:exon
so has part: feature:212708-212758:-1:exon
so has part: feature:212415-212554:-1:exon
so has part: feature:212150-212333:-1:exon
so has part: feature:211896-212016:-1:exon
so has part: feature:211686-211813:-1:exon
so has part: feature:211327-211527:-1:exon
so has part: feature:211100-211242:-1:exon
so has part: feature:210866-211031:-1:exon
so has part: feature:210691-210790:-1:exon
so has part: feature:210257-210588:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:214382-214525:-1:exon

position:214382:-1
position: 214382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:213105-213178:-1:exon

position:213105:-1
position: 213105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213178:-1
position: 213178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:212708-212758:-1:exon

position:212708:-1
position: 212708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212758:-1
position: 212758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:212415-212554:-1:exon

position:212415:-1
position: 212415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212554:-1
position: 212554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:212150-212333:-1:exon

position:212150:-1
position: 212150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212333:-1
position: 212333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:211896-212016:-1:exon

position:211896:-1
position: 211896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212016:-1
position: 212016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:211686-211813:-1:exon

position:211686:-1
position: 211686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211813:-1
position: 211813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:211327-211527:-1:exon

position:211327:-1
position: 211327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211527:-1
position: 211527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:211100-211242:-1:exon

position:211100:-1
position: 211100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211242:-1
position: 211242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:210866-211031:-1:exon

position:210866:-1
position: 210866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211031:-1
position: 211031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:210691-210790:-1:exon

position:210691:-1
position: 210691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210790:-1
position: 210790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:210257-210588:-1:exon

position:210588:-1
position: 210588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PLD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 345164
gene: PLD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5'-3' exonuclease PLD3
translation: MLGEIRFAVFLPHAGMKPDSTYKQLESLEDPAEQPTHFPPKCSHGVLRFAILLTLFILIFFLFFNLHLSSALGSGADGDAGYCSDACRIVLVESIPEGMTFSEGSVLNPSTFSTWMNLLGTVTHSLDIASFYWTMTNEDTRTHELSAAQGEQILEELLQLSQRGITVRIAVSHPSAKSPLNDLQALERSGAVVRTIDMPRLTGGVLHTKFWLVDGTHLYIGSANMDWRSLTQVKELGTAVYNCSCLAKDLGKIFEAYWALGVPDASIPVPWPANYSTTYNMETPLELKLNDTDAAVYFSQSSPPALCAAGRTQDLGALLNVIDTAEDFVDVAVMSYLPTTEFSHPQRFWPAIDNHLRKAIFERRVKVRLLAGCWQHSQVTMFPFLKSLAAVADNRTRYSVEVRLFMVPTSAAQARIPYARVNHNKYMVTEKAAYIGTSNWSGDYFVRTAGSALVVNQMVKQTGAGTAAGTSTIREELQAVFERDWNSQYSVDISDAEQWENFCGFR
SIO_010081: PLD3
subclass of: SO_0000673
so part of: PLD3
location: complement(join(210374..210588,210691..210790,210866..211031,211100..211242,211327..211527,211686..211813,211896..212016,212150..212333,212415..212554,212708..212758,213105..213176))
location: region:210374-213176:-1
so has part: feature:213105-213176:-1:exon
so has part: feature:212708-212758:-1:exon
so has part: feature:212415-212554:-1:exon
so has part: feature:212150-212333:-1:exon
so has part: feature:211896-212016:-1:exon
so has part: feature:211686-211813:-1:exon
so has part: feature:211327-211527:-1:exon
so has part: feature:211100-211242:-1:exon
so has part: feature:210866-211031:-1:exon
so has part: feature:210691-210790:-1:exon
so has part: feature:210374-210588:-1:exon

XP_055553957.1
type: Protein
SIO_000068: ncbiprotein

position:210374:-1
position: 210374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213176:-1
position: 213176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213105-213176:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:212708-212758:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:212415-212554:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:212150-212333:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:211896-212016:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:211686-211813:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:211327-211527:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:211100-211242:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:210866-211031:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:210691-210790:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:210374-210588:-1:exon

C22H19orf47
type: Gene
subclass of: SO_0000704
RO_0002162: 345164
gene: C22H19orf47
note: chromosome 22 C19orf47 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 214957..219177
location: region:214957-219177:1
so has part: feature:214957-219177:1:exon
subclass of: SO_0000010

102046193
type: Gene
SIO_000068: ncbigene

position:214957:1
position: 214957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219177:1
position: 219177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214957-219177:1:exon

C22H19orf47
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 345164
gene: C22H19orf47
product: chromosome 22 C19orf47 homolog
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_014278654.3
SIO_010081: C22H19orf47
subclass of: SO_0000673
so part of: C22H19orf47
location: join(214957..215079,215364..215451,215722..215836,215949..216030,216220..216345,217261..217407,217760..217830,218553..219177)
location: region:214957-219177:1
so has part: feature:214957-215079:1:exon
so has part: feature:215364-215451:1:exon
so has part: feature:215722-215836:1:exon
so has part: feature:215949-216030:1:exon
so has part: feature:216220-216345:1:exon
so has part: feature:217261-217407:1:exon
so has part: feature:217760-217830:1:exon
so has part: feature:218553-219177:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:214957-215079:1:exon

position:215079:1
position: 215079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:215364-215451:1:exon

position:215364:1
position: 215364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215451:1
position: 215451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:215722-215836:1:exon

position:215722:1
position: 215722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215836:1
position: 215836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:215949-216030:1:exon

position:215949:1
position: 215949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216030:1
position: 216030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:216220-216345:1:exon

position:216220:1
position: 216220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216345:1
position: 216345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:217261-217407:1:exon

position:217261:1
position: 217261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217407:1
position: 217407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:217760-217830:1:exon

position:217760:1
position: 217760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217830:1
position: 217830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:218553-219177:1:exon

position:218553:1
position: 218553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C22H19orf47
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 345164
gene: C22H19orf47
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: uncharacterized protein C19orf47 homolog
translation: MGLRPPCRRVLSAALSAGCSGCCRLTHPASSPSAMVSVTMATSEWIQFFKEAGIPPGPAVNYAVMFVDNRIQKNMLLDLNKEIMNELGITVVGDIIAILKHAKIVYRQEMCKAATELLCPSSPNVQAELRRNASSAASRMITNSLSRDSPPAPPLRQRPHASKISVTVSNKLAATKAGLGDMADGNPTIPVKRRRVTAEMEGKYIINMPKGTTPRTKKILEQQAAKGLQRTSVFDRLGAEAKADTTTGGKPTGVFSRLGDTLGTNRDKATDSDDDCSVLQYAGVLKKLTKPPRKESAEPTGGTVKAKATSSEAKLVTTAIQRLSQRNIATAAVKPSSKISVIGITAVPVEAQDGDVSSTKDKNDPEFRVTIKRTWGCGKVSSTSEPPGAQMDSTGTVSVFKRLGKKPD
SIO_010081: C22H19orf47
subclass of: SO_0000673
so part of: C22H19orf47
location: join(214959..215079,215364..215451,215722..215836,215949..216030,216220..216345,217261..217407,217760..217830,218553..219030)
location: region:214959-219030:1
so has part: feature:214959-215079:1:exon
so has part: feature:215364-215451:1:exon
so has part: feature:215722-215836:1:exon
so has part: feature:215949-216030:1:exon
so has part: feature:216220-216345:1:exon
so has part: feature:217261-217407:1:exon
so has part: feature:217760-217830:1:exon
so has part: feature:218553-219030:1:exon

XP_014134129.2
type: Protein
SIO_000068: ncbiprotein

position:214959:1
position: 214959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219030:1
position: 219030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214959-215079:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:215364-215451:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:215722-215836:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215949-216030:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:216220-216345:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:217261-217407:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:217760-217830:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:218553-219030:1:exon

AKT2
type: Gene
subclass of: SO_0000704
RO_0002162: 345164
gene: AKT2
note: AKT serine/threonine kinase 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 220498..230387
location: region:220498-230387:1
so has part: feature:220498-230387:1:exon
subclass of: SO_0000010

102060018
type: Gene
SIO_000068: ncbigene

position:220498:1
position: 220498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230387:1
position: 230387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220498-230387:1:exon

AKT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 345164
gene: AKT2
product: AKT serine/threonine kinase 2, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055697979.1
SIO_010081: AKT2
subclass of: SO_0000673
so part of: AKT2
location: join(220498..220746,224100..224246,225268..225396,225581..225692,225874..226027,226201..226332,226799..226864,226998..227066,227586..227708,227926..228054,228285..228499,228570..228657,228751..228853,229115..230387)
location: region:220498-230387:1
so has part: feature:220498-220746:1:exon
so has part: feature:224100-224246:1:exon
so has part: feature:225268-225396:1:exon
so has part: feature:225581-225692:1:exon
so has part: feature:225874-226027:1:exon
so has part: feature:226201-226332:1:exon
so has part: feature:226799-226864:1:exon
so has part: feature:226998-227066:1:exon
so has part: feature:227586-227708:1:exon
so has part: feature:227926-228054:1:exon
so has part: feature:228285-228499:1:exon
so has part: feature:228570-228657:1:exon
so has part: feature:228751-228853:1:exon
so has part: feature:229115-230387:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:220498-220746:1:exon

position:220746:1
position: 220746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:224100-224246:1:exon

position:224100:1
position: 224100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224246:1
position: 224246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:225268-225396:1:exon

position:225268:1
position: 225268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225396:1
position: 225396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:225581-225692:1:exon

position:225581:1
position: 225581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225692:1
position: 225692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:225874-226027:1:exon

position:225874:1
position: 225874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226027:1
position: 226027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:226201-226332:1:exon

position:226201:1
position: 226201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226332:1
position: 226332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:226799-226864:1:exon

position:226799:1
position: 226799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226864:1
position: 226864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:226998-227066:1:exon

position:226998:1
position: 226998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227066:1
position: 227066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:227586-227708:1:exon

position:227586:1
position: 227586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227708:1
position: 227708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:227926-228054:1:exon

position:227926:1
position: 227926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228054:1
position: 228054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:228285-228499:1:exon

position:228285:1
position: 228285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228499:1
position: 228499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:228570-228657:1:exon

position:228570:1
position: 228570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228657:1
position: 228657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:228751-228853:1:exon

position:228751:1
position: 228751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228853:1
position: 228853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:229115-230387:1:exon

position:229115:1
position: 229115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AKT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 345164
gene: AKT2
product: AKT serine/threonine kinase 2, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_027802932.2
SIO_010081: AKT2
subclass of: SO_0000673
so part of: AKT2
location: join(222254..222381,224100..224246,225268..225396,225581..225692,225874..226027,226201..226332,226799..226864,226998..227066,227586..227708,227926..228054,228285..228499,228570..228657,228751..228853,229115..230387)
location: region:222254-230387:1
so has part: feature:222254-222381:1:exon
so has part: feature:224100-224246:1:exon
so has part: feature:225268-225396:1:exon
so has part: feature:225581-225692:1:exon
so has part: feature:225874-226027:1:exon
so has part: feature:226201-226332:1:exon
so has part: feature:226799-226864:1:exon
so has part: feature:226998-227066:1:exon
so has part: feature:227586-227708:1:exon
so has part: feature:227926-228054:1:exon
so has part: feature:228285-228499:1:exon
so has part: feature:228570-228657:1:exon
so has part: feature:228751-228853:1:exon
so has part: feature:229115-230387:1:exon

position:222254:1
position: 222254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:222254-222381:1:exon

position:222381:1
position: 222381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:224100-224246:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:225268-225396:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:225581-225692:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:225874-226027:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:226201-226332:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:226799-226864:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:226998-227066:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:227586-227708:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:227926-228054:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:228285-228499:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:228570-228657:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:228751-228853:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:229115-230387:1:exon

AKT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 345164
gene: AKT2
product: AKT serine/threonine kinase 2, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_005437554.4
SIO_010081: AKT2
subclass of: SO_0000673
so part of: AKT2
location: join(223047..223133,224100..224246,225268..225396,225581..225692,225874..226027,226201..226332,226799..226864,226998..227066,227586..227708,227926..228054,228285..228499,228570..228657,228751..228853,229115..230387)
location: region:223047-230387:1
so has part: feature:223047-223133:1:exon
so has part: feature:224100-224246:1:exon
so has part: feature:225268-225396:1:exon
so has part: feature:225581-225692:1:exon
so has part: feature:225874-226027:1:exon
so has part: feature:226201-226332:1:exon
so has part: feature:226799-226864:1:exon
so has part: feature:226998-227066:1:exon
so has part: feature:227586-227708:1:exon
so has part: feature:227926-228054:1:exon
so has part: feature:228285-228499:1:exon
so has part: feature:228570-228657:1:exon
so has part: feature:228751-228853:1:exon
so has part: feature:229115-230387:1:exon

position:223047:1
position: 223047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223047-223133:1:exon

position:223133:1
position: 223133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:224100-224246:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:225268-225396:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:225581-225692:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:225874-226027:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:226201-226332:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:226799-226864:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:226998-227066:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:227586-227708:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:227926-228054:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:228285-228499:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:228570-228657:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:228751-228853:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:229115-230387:1:exon

AKT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 345164
gene: AKT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RAC-beta serine/threonine-protein kinase
translation: MNEVLVVKEGWLHKRGEYIKTWRPRYFLLKSDGSFIGYKERPETSDHSFPPLNNFSVAECQLMKTERPRPNTFVIRCLQWTTVIERTFHVDSPEEREEWMRAIQTVANSLKNQEPEADTMDYKCGSPNDSTGAEEMEVAVSKTRAKATMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTNDRLCFVMEYANGGELFFHLSRERVFTEDRARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGITDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPNDAKEVMEHRFFAPINWQDVVQKKLVPPFKPQVTSEIDTRYFDDEFTAQSITITPPDRYDNMGSLESDQRTHFPQFSYSASIRE
SIO_010081: AKT2
subclass of: SO_0000673
so part of: AKT2
location: join(224201..224246,225268..225396,225581..225692,225874..226027,226201..226332,226799..226864,226998..227066,227586..227708,227926..228054,228285..228499,228570..228657,228751..228853,229115..229194)
location: region:224201-229194:1
so has part: feature:224201-224246:1:exon
so has part: feature:225268-225396:1:exon
so has part: feature:225581-225692:1:exon
so has part: feature:225874-226027:1:exon
so has part: feature:226201-226332:1:exon
so has part: feature:226799-226864:1:exon
so has part: feature:226998-227066:1:exon
so has part: feature:227586-227708:1:exon
so has part: feature:227926-228054:1:exon
so has part: feature:228285-228499:1:exon
so has part: feature:228570-228657:1:exon
so has part: feature:228751-228853:1:exon
so has part: feature:229115-229194:1:exon

XP_055553954.1
type: Protein
SIO_000068: ncbiprotein

position:224201:1
position: 224201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229194:1
position: 229194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224201-224246:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:225268-225396:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:225581-225692:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:225874-226027:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:226201-226332:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:226799-226864:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:226998-227066:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:227586-227708:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:227926-228054:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:228285-228499:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:228570-228657:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:228751-228853:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:229115-229194:1:exon

AKT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 345164
gene: AKT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RAC-beta serine/threonine-protein kinase
translation: MNEVLVVKEGWLHKRGEYIKTWRPRYFLLKSDGSFIGYKERPETSDHSFPPLNNFSVAECQLMKTERPRPNTFVIRCLQWTTVIERTFHVDSPEEREEWMRAIQTVANSLKNQEPEADTMDYKCGSPNDSTGAEEMEVAVSKTRAKATMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTNDRLCFVMEYANGGELFFHLSRERVFTEDRARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGITDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPNDAKEVMEHRFFAPINWQDVVQKKLVPPFKPQVTSEIDTRYFDDEFTAQSITITPPDRYDNMGSLESDQRTHFPQFSYSASIRE
SIO_010081: AKT2
subclass of: SO_0000673
so part of: AKT2
location: join(224201..224246,225268..225396,225581..225692,225874..226027,226201..226332,226799..226864,226998..227066,227586..227708,227926..228054,228285..228499,228570..228657,228751..228853,229115..229194)
location: region:224201-229194:1
so has part: feature:224201-224246:1:exon
so has part: feature:225268-225396:1:exon
so has part: feature:225581-225692:1:exon
so has part: feature:225874-226027:1:exon
so has part: feature:226201-226332:1:exon
so has part: feature:226799-226864:1:exon
so has part: feature:226998-227066:1:exon
so has part: feature:227586-227708:1:exon
so has part: feature:227926-228054:1:exon
so has part: feature:228285-228499:1:exon
so has part: feature:228570-228657:1:exon
so has part: feature:228751-228853:1:exon
so has part: feature:229115-229194:1:exon

XP_027658733.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:224201-224246:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:225268-225396:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:225581-225692:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:225874-226027:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:226201-226332:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:226799-226864:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:226998-227066:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:227586-227708:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:227926-228054:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:228285-228499:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:228570-228657:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:228751-228853:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:229115-229194:1:exon

AKT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 345164
gene: AKT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RAC-beta serine/threonine-protein kinase
translation: MNEVLVVKEGWLHKRGEYIKTWRPRYFLLKSDGSFIGYKERPETSDHSFPPLNNFSVAECQLMKTERPRPNTFVIRCLQWTTVIERTFHVDSPEEREEWMRAIQTVANSLKNQEPEADTMDYKCGSPNDSTGAEEMEVAVSKTRAKATMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTNDRLCFVMEYANGGELFFHLSRERVFTEDRARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGITDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPNDAKEVMEHRFFAPINWQDVVQKKLVPPFKPQVTSEIDTRYFDDEFTAQSITITPPDRYDNMGSLESDQRTHFPQFSYSASIRE
SIO_010081: AKT2
subclass of: SO_0000673
so part of: AKT2
location: join(224201..224246,225268..225396,225581..225692,225874..226027,226201..226332,226799..226864,226998..227066,227586..227708,227926..228054,228285..228499,228570..228657,228751..228853,229115..229194)
location: region:224201-229194:1
so has part: feature:224201-224246:1:exon
so has part: feature:225268-225396:1:exon
so has part: feature:225581-225692:1:exon
so has part: feature:225874-226027:1:exon
so has part: feature:226201-226332:1:exon
so has part: feature:226799-226864:1:exon
so has part: feature:226998-227066:1:exon
so has part: feature:227586-227708:1:exon
so has part: feature:227926-228054:1:exon
so has part: feature:228285-228499:1:exon
so has part: feature:228570-228657:1:exon
so has part: feature:228751-228853:1:exon
so has part: feature:229115-229194:1:exon

XP_005437611.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:224201-224246:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:225268-225396:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:225581-225692:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:225874-226027:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:226201-226332:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:226799-226864:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:226998-227066:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:227586-227708:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:227926-228054:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:228285-228499:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:228570-228657:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:228751-228853:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:229115-229194:1:exon

LOC102046533
type: Gene
subclass of: SO_0000704
RO_0002162: 345164
gene: LOC102046533
note: gastric inhibitory polypeptide receptor; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(230424..237278)
location: region:230424-237278:-1
so has part: feature:230424-237278:-1:exon
subclass of: SO_0000010

102046533
type: Gene
SIO_000068: ncbigene

position:230424:-1
position: 230424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237278:-1
position: 237278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230424-237278:-1:exon

LOC102046533
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 345164
gene: LOC102046533
product: gastric inhibitory polypeptide receptor
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055697975.1
SIO_010081: LOC102046533
subclass of: SO_0000673
so part of: LOC102046533
location: complement(join(230424..230761,230874..230990,231186..231285,231542..231766,232277..232286,232336..232396,232475..232634,233218..233365,233443..233546,235496..235617,235686..235793,235872..235962,236367..236439,237242..237278))
location: region:230424-237278:-1
so has part: feature:237242-237278:-1:exon
so has part: feature:236367-236439:-1:exon
so has part: feature:235872-235962:-1:exon
so has part: feature:235686-235793:-1:exon
so has part: feature:235496-235617:-1:exon
so has part: feature:233443-233546:-1:exon
so has part: feature:233218-233365:-1:exon
so has part: feature:232475-232634:-1:exon
so has part: feature:232336-232396:-1:exon
so has part: feature:232277-232286:-1:exon
so has part: feature:231542-231766:-1:exon
so has part: feature:231186-231285:-1:exon
so has part: feature:230874-230990:-1:exon
so has part: feature:230424-230761:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:237242-237278:-1:exon

position:237242:-1
position: 237242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:236367-236439:-1:exon

position:236367:-1
position: 236367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236439:-1
position: 236439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:235872-235962:-1:exon

position:235872:-1
position: 235872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235962:-1
position: 235962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:235686-235793:-1:exon

position:235686:-1
position: 235686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235793:-1
position: 235793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:235496-235617:-1:exon

position:235496:-1
position: 235496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235617:-1
position: 235617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:233443-233546:-1:exon

position:233443:-1
position: 233443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233546:-1
position: 233546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:233218-233365:-1:exon

position:233218:-1
position: 233218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233365:-1
position: 233365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:232475-232634:-1:exon

position:232475:-1
position: 232475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232634:-1
position: 232634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:232336-232396:-1:exon

position:232336:-1
position: 232336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232396:-1
position: 232396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:232277-232286:-1:exon

position:232277:-1
position: 232277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232286:-1
position: 232286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:231542-231766:-1:exon

position:231542:-1
position: 231542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231766:-1
position: 231766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:231186-231285:-1:exon

position:231186:-1
position: 231186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231285:-1
position: 231285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:230874-230990:-1:exon

position:230874:-1
position: 230874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230990:-1
position: 230990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:230424-230761:-1:exon

position:230761:-1
position: 230761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102046533
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 345164
gene: LOC102046533
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gastric inhibitory polypeptide receptor
translation: MGHWAMPPPLLSQVLHGAEEERSAQATLAAWHQYRHACELRLHLDPPAPGPVCNRSFDMYACWGDAVPNTTVTVPCPWYLPWHHRVQGGVVARHCGPDGRWVLDETGRPWRDHSQCQDPAQEQPLQRQAWLLEQFRLLYTVGYSLSLVALLLALLLLLTFRRLHCTRNFIHANLFLSFVLRAGAILTRDALLRRRLRPGPAHPLQLVGQEAVASCRLAQVVTQYCVGANYGWLLAEGLFLHKLLVLVAFSGRRCLPAFLLLGWGAPVLFVVPWVVARYLYENEGGHPHPTPPLPQVPGGVLPPPVTLGSQQGAEVTLQLLFLDGEEAFGDWSATDSLYGARHLAAQMATTRHGPHGTQLTAMSLLVLLDLLGARHPAIHSHFTRTHHWFLRLVAIEQRLRRLGLLHAAPQDQPFFRLSPAPGPVEDDHVPFLQRGVPILHLIPTPFPRVWHTLEDTEDNLHPPTVEDLCKILVTFVAEFLQL
SIO_010081: LOC102046533
subclass of: SO_0000673
so part of: LOC102046533
location: complement(join(230616..230761,230874..230990,231186..231285,231542..231766,232277..232286,232336..232396,232475..232634,233218..233365,233443..233546,235496..235617,235686..235793,235872..235962,236367..236423))
location: region:230616-236423:-1
so has part: feature:236367-236423:-1:exon
so has part: feature:235872-235962:-1:exon
so has part: feature:235686-235793:-1:exon
so has part: feature:235496-235617:-1:exon
so has part: feature:233443-233546:-1:exon
so has part: feature:233218-233365:-1:exon
so has part: feature:232475-232634:-1:exon
so has part: feature:232336-232396:-1:exon
so has part: feature:232277-232286:-1:exon
so has part: feature:231542-231766:-1:exon
so has part: feature:231186-231285:-1:exon
so has part: feature:230874-230990:-1:exon
so has part: feature:230616-230761:-1:exon

XP_055553950.1
type: Protein
SIO_000068: ncbiprotein

position:230616:-1
position: 230616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236423:-1
position: 236423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236367-236423:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:235872-235962:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:235686-235793:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:235496-235617:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:233443-233546:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:233218-233365:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:232475-232634:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:232336-232396:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:232277-232286:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:231542-231766:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:231186-231285:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:230874-230990:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:230616-230761:-1:exon

OPA3
type: Gene
subclass of: SO_0000704
RO_0002162: 345164
gene: OPA3
note: outer mitochondrial membrane lipid metabolism regulator OPA3; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 238497..239331
location: region:238497-239331:1
so has part: feature:238497-239331:1:exon
subclass of: SO_0000010

129734459
type: Gene
SIO_000068: ncbigene

position:238497:1
position: 238497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239331:1
position: 239331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238497-239331:1:exon

OPA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 345164
gene: OPA3
product: outer mitochondrial membrane lipid metabolism regulator OPA3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055697980.1
SIO_010081: OPA3
subclass of: SO_0000673
so part of: OPA3
location: join(238497..238680,238818..239331)
location: region:238497-239331:1
so has part: feature:238497-238680:1:exon
so has part: feature:238818-239331:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:238497-238680:1:exon

position:238680:1
position: 238680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:238818-239331:1:exon

position:238818:1
position: 238818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OPA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 345164
gene: OPA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: optic atrophy 3 protein
translation: MVAGAFPLAKLLTLGARQLSRPLAARIKAGARASPFFRTYICLPPAQLYHWVEMRAKMRLMGFRGAAVKPLNEEAAAELGAELLGEAIVFGVGGLCLYLEYARQAGQTRRREGEQAAALRELREGLEGLRAELEAMAARLPPGPGGLGHAPANLNHAHAGLNHAGANPAPAGANHAPAECSCAPAGASHAPAASSHAPVGTNHASTDPGY
SIO_010081: OPA3
subclass of: SO_0000673
so part of: OPA3
location: join(238539..238680,238818..239308)
location: region:238539-239308:1
so has part: feature:238539-238680:1:exon
so has part: feature:238818-239308:1:exon

XP_055553955.1
type: Protein
SIO_000068: ncbiprotein

position:238539:1
position: 238539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239308:1
position: 239308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238539-238680:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:238818-239308:1:exon

VASP
type: Gene
subclass of: SO_0000704
RO_0002162: 345164
gene: VASP
note: vasodilator stimulated phosphoprotein; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(240866..246415)
location: region:240866-246415:-1
so has part: feature:240866-246415:-1:exon
subclass of: SO_0000010

129734457
type: Gene
SIO_000068: ncbigene

position:240866:-1
position: 240866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246415:-1
position: 246415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240866-246415:-1:exon

VASP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 345164
gene: VASP
product: vasodilator stimulated phosphoprotein
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055697976.1
SIO_010081: VASP
subclass of: SO_0000673
so part of: VASP
location: complement(join(240866..241306,241401..241458,241542..241620,241898..241943,242113..242155,242381..242441,242552..242629,242745..242964,243093..243133,243241..243304,243399..243567,243988..244159,245520..245647,246271..246415))
location: region:240866-246415:-1
so has part: feature:246271-246415:-1:exon
so has part: feature:245520-245647:-1:exon
so has part: feature:243988-244159:-1:exon
so has part: feature:243399-243567:-1:exon
so has part: feature:243241-243304:-1:exon
so has part: feature:243093-243133:-1:exon
so has part: feature:242745-242964:-1:exon
so has part: feature:242552-242629:-1:exon
so has part: feature:242381-242441:-1:exon
so has part: feature:242113-242155:-1:exon
so has part: feature:241898-241943:-1:exon
so has part: feature:241542-241620:-1:exon
so has part: feature:241401-241458:-1:exon
so has part: feature:240866-241306:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:246271-246415:-1:exon

position:246271:-1
position: 246271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:245520-245647:-1:exon

position:245520:-1
position: 245520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245647:-1
position: 245647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:243988-244159:-1:exon

position:243988:-1
position: 243988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244159:-1
position: 244159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:243399-243567:-1:exon

position:243399:-1
position: 243399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243567:-1
position: 243567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:243241-243304:-1:exon

position:243241:-1
position: 243241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243304:-1
position: 243304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:243093-243133:-1:exon

position:243093:-1
position: 243093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243133:-1
position: 243133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:242745-242964:-1:exon

position:242745:-1
position: 242745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242964:-1
position: 242964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:242552-242629:-1:exon

position:242552:-1
position: 242552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242629:-1
position: 242629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:242381-242441:-1:exon

position:242381:-1
position: 242381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242441:-1
position: 242441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:242113-242155:-1:exon

position:242113:-1
position: 242113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242155:-1
position: 242155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:241898-241943:-1:exon

position:241898:-1
position: 241898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241943:-1
position: 241943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:241542-241620:-1:exon

position:241542:-1
position: 241542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241620:-1
position: 241620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:241401-241458:-1:exon

position:241401:-1
position: 241401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241458:-1
position: 241458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:240866-241306:-1:exon

position:241306:-1
position: 241306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VASP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 345164
gene: VASP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vasodilator-stimulated phosphoprotein
translation: MGGVAAGRDRPVPPPPPPPEGPGPAPVPRRSHQHEFALGRTEVTGTGEHRERYCGHWELVSGALGSTSTGGTVTIWNCETVLCSARASVLLYDDTHKQWVAAGGGPQTLSCVQLYHHPGTNAFRLVGRKMQPDQQVVLNCPLGRGLRYSQATPQFHQWREARRVWGLSFGAPREAALFAAAVLRALRALEEGTPLSWPDPDGSASEEPEQQERHVLEDPERRVAPAGTQAMPTGGPPPPPGPPPPPGPPPHPLAPPQPRGSHRPPPYHQQQQGVLPGGVPGGSPVLQLPSRELNSGKSARPPKGDGARGGGGGGLMEEMSAMLARRRKATLHGDKPVPKKDDDITSDEVEPGTRTPGQPVEPVRRPWEKASSTLPRMKSAIPAAPADPPSPADEPDLERMKQELLEEVRRELQKMKEEIIEAFVVELRKRSAP
SIO_010081: VASP
subclass of: SO_0000673
so part of: VASP
location: complement(join(241269..241306,241401..241458,241542..241620,241898..241943,242113..242155,242381..242441,242552..242629,242745..242964,243093..243133,243241..243304,243399..243567,243988..244159,245520..245647,246271..246375))
location: region:241269-246375:-1
so has part: feature:246271-246375:-1:exon
so has part: feature:245520-245647:-1:exon
so has part: feature:243988-244159:-1:exon
so has part: feature:243399-243567:-1:exon
so has part: feature:243241-243304:-1:exon
so has part: feature:243093-243133:-1:exon
so has part: feature:242745-242964:-1:exon
so has part: feature:242552-242629:-1:exon
so has part: feature:242381-242441:-1:exon
so has part: feature:242113-242155:-1:exon
so has part: feature:241898-241943:-1:exon
so has part: feature:241542-241620:-1:exon
so has part: feature:241401-241458:-1:exon
so has part: feature:241269-241306:-1:exon

XP_055553951.1
type: Protein
SIO_000068: ncbiprotein

position:241269:-1
position: 241269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246375:-1
position: 246375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246271-246375:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:245520-245647:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:243988-244159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:243399-243567:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:243241-243304:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:243093-243133:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:242745-242964:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:242552-242629:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:242381-242441:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:242113-242155:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:241898-241943:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:241542-241620:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:241401-241458:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:241269-241306:-1:exon

LOC129734458
type: Gene
subclass of: SO_0000704
RO_0002162: 345164
gene: LOC129734458
note: reticulon-1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 247311..252663
location: region:247311-252663:1
so has part: feature:247311-252663:1:exon
subclass of: SO_0000010

129734458
type: Gene
SIO_000068: ncbigene

position:247311:1
position: 247311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252663:1
position: 252663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247311-252663:1:exon

LOC129734458
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 345164
gene: LOC129734458
product: reticulon-1-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055697977.1
SIO_010081: LOC129734458
subclass of: SO_0000673
so part of: LOC129734458
location: join(247311..247581,248448..248533,248683..248848,249134..249295,250218..250425,250764..250902,251478..251547,252022..252068,252241..252299,252416..252663)
location: region:247311-252663:1
so has part: feature:247311-247581:1:exon
so has part: feature:248448-248533:1:exon
so has part: feature:248683-248848:1:exon
so has part: feature:249134-249295:1:exon
so has part: feature:250218-250425:1:exon
so has part: feature:250764-250902:1:exon
so has part: feature:251478-251547:1:exon
so has part: feature:252022-252068:1:exon
so has part: feature:252241-252299:1:exon
so has part: feature:252416-252663:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:247311-247581:1:exon

position:247581:1
position: 247581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:248448-248533:1:exon

position:248448:1
position: 248448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:248533:1
position: 248533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:248683-248848:1:exon

position:248683:1
position: 248683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:248848:1
position: 248848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:249134-249295:1:exon

position:249134:1
position: 249134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249295:1
position: 249295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:250218-250425:1:exon

position:250218:1
position: 250218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:250425:1
position: 250425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:250764-250902:1:exon

position:250764:1
position: 250764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:250902:1
position: 250902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:251478-251547:1:exon

position:251478:1
position: 251478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251547:1
position: 251547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:252022-252068:1:exon

position:252022:1
position: 252022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252068:1
position: 252068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:252241-252299:1:exon

position:252241:1
position: 252241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252299:1
position: 252299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:252416-252663:1:exon

position:252416:1
position: 252416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC129734458
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 345164
gene: LOC129734458
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: reticulon-1-like
translation: MRGGGRPGGNREPHAGAAAMGQVLGFAHCSTHRHREGPRLREWLGMGRREGLGYRAGATGRGRGWRYREWLGVPRMRIPRVKAPGVAGYRGGNEESDFPELQVASEPPEEEEEEEDEDGDSPGGPSGGRTPAWLPEPPQNVLRSPRPPSRGSWRSGGALPDLGGPETEETLMSLAAPAPQPPPAVPPQSAGGALLLPPPAPPPDPPSIPDPPPAPPEQSLSPPASDVLVWELLYWRAPGRSALVLVGVLGTLGCLARFSAISVGAYGALATLAVTVPLRLHRVALRVLRRHPPEPPCRTQPEGTVGLSPEEQQRWARRLAQHLVAATRTLTRLFLVHSVPESLKFAFFFYLLTYVGAVCNGLTLLGAGVICAFTFPVLYRHHQAQIDQYVSLVRSHLSHLRARIQAKLSSAKVKPR
SIO_010081: LOC129734458
subclass of: SO_0000673
so part of: LOC129734458
location: join(247311..247581,248448..248533,248683..248848,249134..249295,250218..250425,250764..250902,251478..251547,252022..252068,252241..252299,252416..252458)
location: region:247311-252458:1
so has part: feature:247311-247581:1:exon
so has part: feature:248448-248533:1:exon
so has part: feature:248683-248848:1:exon
so has part: feature:249134-249295:1:exon
so has part: feature:250218-250425:1:exon
so has part: feature:250764-250902:1:exon
so has part: feature:251478-251547:1:exon
so has part: feature:252022-252068:1:exon
so has part: feature:252241-252299:1:exon
so has part: feature:252416-252458:1:exon

XP_055553952.1
type: Protein
SIO_000068: ncbiprotein

position:252458:1
position: 252458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247311-247581:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248448-248533:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:248683-248848:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249134-249295:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:250218-250425:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:250764-250902:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251478-251547:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:252022-252068:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:252241-252299:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:252416-252458:1:exon

FOSB
type: Gene
subclass of: SO_0000704
RO_0002162: 345164
gene: FOSB
note: FosB proto-oncogene, AP-1 transcription factor subunit; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 255123..261775
location: region:255123-261775:1
so has part: feature:255123-261775:1:exon
subclass of: SO_0000010

106631055
type: Gene
SIO_000068: ncbigene

position:255123:1
position: 255123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261775:1
position: 261775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255123-261775:1:exon

FOSB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 345164
gene: FOSB
product: FosB proto-oncogene, AP-1 transcription factor subunit
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons
transcript id: XM_055697986.1
SIO_010081: FOSB
subclass of: SO_0000673
so part of: FOSB
location: join(255123..256431,257756..258042,258157..258264,259235..259384,259549..261775)
location: region:255123-261775:1
so has part: feature:255123-256431:1:exon
so has part: feature:257756-258042:1:exon
so has part: feature:258157-258264:1:exon
so has part: feature:259235-259384:1:exon
so has part: feature:259549-261775:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:255123-256431:1:exon

position:256431:1
position: 256431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:257756-258042:1:exon

position:257756:1
position: 257756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258042:1
position: 258042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:258157-258264:1:exon

position:258157:1
position: 258157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258264:1
position: 258264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:259235-259384:1:exon

position:259235:1
position: 259235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259384:1
position: 259384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:259549-261775:1:exon

position:259549:1
position: 259549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FOSB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 345164
gene: FOSB
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protein FosB
translation: MYQGFPGDYDSGSRCSSSPSAESQYLSSVDSFGSPGAAAAAQECSGLGDMPGSFVPTVTAITTSQDLQWLVQPTLISSVAQSQPPGAPMAHPPPPVDPYDLPGPSYSTPGMGAFATGSTAPPARPTRARPRRSREETLTPEEEEKRRVRRERNKLAAAKCRNRRRELTDRLQAETDQLEEEKAELESEIAELQKEKDRLEFVLVAHAPACKLPYEDVGSLGAQREPPAEPRISGAAAATSPRTP
SIO_010081: FOSB
subclass of: SO_0000673
so part of: FOSB
location: join(256306..256431,257756..258042,258157..258264,259235..259384,259549..259614)
location: region:256306-259614:1
so has part: feature:256306-256431:1:exon
so has part: feature:257756-258042:1:exon
so has part: feature:258157-258264:1:exon
so has part: feature:259235-259384:1:exon
so has part: feature:259549-259614:1:exon

XP_055553961.1
type: Protein
SIO_000068: ncbiprotein

position:256306:1
position: 256306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259614:1
position: 259614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256306-256431:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:257756-258042:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:258157-258264:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:259235-259384:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:259549-259614:1:exon

EXOC3L2
type: Gene
subclass of: SO_0000704
RO_0002162: 345164
gene: EXOC3L2
note: exocyst complex component 3 like 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(264693..272387)
location: region:264693-272387:-1
so has part: feature:264693-272387:-1:exon
subclass of: SO_0000010

102046703
type: Gene
SIO_000068: ncbigene

position:264693:-1
position: 264693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272387:-1
position: 272387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264693-272387:-1:exon

EXOC3L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 345164
gene: EXOC3L2
product: exocyst complex component 3 like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_055697978.1
SIO_010081: EXOC3L2
subclass of: SO_0000673
so part of: EXOC3L2
location: complement(join(264693..265566,266336..266457,266548..266703,266775..266897,267004..267139,267225..267332,267778..267878,268134..268244,268614..268728,268864..269473,269955..270387,270613..271053,272283..272387))
location: region:264693-272387:-1
so has part: feature:272283-272387:-1:exon
so has part: feature:270613-271053:-1:exon
so has part: feature:269955-270387:-1:exon
so has part: feature:268864-269473:-1:exon
so has part: feature:268614-268728:-1:exon
so has part: feature:268134-268244:-1:exon
so has part: feature:267778-267878:-1:exon
so has part: feature:267225-267332:-1:exon
so has part: feature:267004-267139:-1:exon
so has part: feature:266775-266897:-1:exon
so has part: feature:266548-266703:-1:exon
so has part: feature:266336-266457:-1:exon
so has part: feature:264693-265566:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:272283-272387:-1:exon

position:272283:-1
position: 272283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:270613-271053:-1:exon

position:270613:-1
position: 270613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271053:-1
position: 271053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:269955-270387:-1:exon

position:269955:-1
position: 269955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270387:-1
position: 270387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:268864-269473:-1:exon

position:268864:-1
position: 268864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269473:-1
position: 269473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:268614-268728:-1:exon

position:268614:-1
position: 268614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268728:-1
position: 268728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:268134-268244:-1:exon

position:268134:-1
position: 268134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268244:-1
position: 268244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:267778-267878:-1:exon

position:267778:-1
position: 267778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267878:-1
position: 267878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:267225-267332:-1:exon

position:267225:-1
position: 267225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267332:-1
position: 267332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:267004-267139:-1:exon

position:267004:-1
position: 267004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267139:-1
position: 267139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:266775-266897:-1:exon

position:266775:-1
position: 266775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266897:-1
position: 266897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:266548-266703:-1:exon

position:266548:-1
position: 266548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266703:-1
position: 266703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:266336-266457:-1:exon

position:266336:-1
position: 266336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266457:-1
position: 266457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:264693-265566:-1:exon

position:265566:-1
position: 265566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EXOC3L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 345164
gene: EXOC3L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exocyst complex component 3-like protein 2
translation: MGRAGPEPEPEVATTAVGGARAGRLATPLKDAVLPRPRCHHCSVQCHRHSAQCHRQSVLGATTTAPSATANTPGAAATALGAAATALSATARVLGAIATAPARHCHSVLAATTTARVPRNAQCHCQSILAATTTAPTATATAPAVTATESSVTTTVPGATATVSSVPPLQRPVPAPQRLVPALMPLLKKAPKEEEEDGDPFAANPESRYRRRATLERLVGLAPFGRARRPPPKDGEGTGGRARRRSEDFGLLRRLPGWRKASVETLGERPVPKRGSLLRLALGTRGRRGSAGERLATLEGEGVAAGEQDGGGQRQEGSGKAREPLSVLEILELIQRRDLVVADEQIIALEAECVTSPPSPSSSPGPAGGRRVRDVALLYQALVAQLWAVVAEAVPAARPYPPLRSVIRVLEQEEAADRQHPPGTPGRPRALRRRWREAVERAAGERLAQVAPAAGLGARLAALAARVVGDLGAVRCHVAPAYPPEYGAFGVYARGYHRALAQQLGALAQRPLPVPDLYLLLDWHSNTYPREVLGHPEVGALLQAQALGPLLPHETQRSLESSCIAAVKAKVEVAVAQELQLSEDTWAEEASSQDLQEGLATRVTGLLRAHVDRAPQITPEFGMEMAHSLLGVLVAFLHSFQRKVERFLEAPGEATPPDGATGRAIALANCCPPFRAFAERLAQFGHSESEELRRQAHGALDKVTRLCHHVLTQRLFEDLKPYFNKLMKRKWLTSSDAFDTIVMLITSFTQKLRPLRPEPYQVLVSELHRRVLIEYVRPLLQVRLVCTSSKMRARVAARLGDEARQLRELFSRLDSASPWLDSVVPRLRELLVLEDTAALQMEVGVLVRDFPDVRRKHVAAVLDVRGLRGQAARQEILGVVQDLEQSEAEPELPRQRAFFSELAVAREVRCLPFHLPRLARLSRLRLRRPQPSRPGQARL
SIO_010081: EXOC3L2
subclass of: SO_0000673
so part of: EXOC3L2
location: complement(join(265308..265566,266336..266457,266548..266703,266775..266897,267004..267139,267225..267332,267778..267878,268134..268244,268614..268728,268864..269473,269955..270387,270613..271053,272283..272387))
location: region:265308-272387:-1
so has part: feature:272283-272387:-1:exon
so has part: feature:270613-271053:-1:exon
so has part: feature:269955-270387:-1:exon
so has part: feature:268864-269473:-1:exon
so has part: feature:268614-268728:-1:exon
so has part: feature:268134-268244:-1:exon
so has part: feature:267778-267878:-1:exon
so has part: feature:267225-267332:-1:exon
so has part: feature:267004-267139:-1:exon
so has part: feature:266775-266897:-1:exon
so has part: feature:266548-266703:-1:exon
so has part: feature:266336-266457:-1:exon
so has part: feature:265308-265566:-1:exon

XP_055553953.1
type: Protein
SIO_000068: ncbiprotein

position:265308:-1
position: 265308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272283-272387:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:270613-271053:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:269955-270387:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:268864-269473:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:268614-268728:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:268134-268244:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:267778-267878:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:267225-267332:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:267004-267139:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:266775-266897:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:266548-266703:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:266336-266457:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:265308-265566:-1:exon

MARK4
type: Gene
subclass of: SO_0000704
RO_0002162: 345164
gene: MARK4
note: microtubule affinity regulating kinase 4; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 272362..281785
location: region:272362-281785:1
so has part: feature:272362-281785:1:exon
subclass of: SO_0000010

106631056
type: Gene
SIO_000068: ncbigene

position:272362:1
position: 272362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281785:1
position: 281785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272362-281785:1:exon

MARK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 345164
gene: MARK4
product: microtubule affinity regulating kinase 4
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 19 Proteins
transcript id: XM_055697984.1
SIO_010081: MARK4
subclass of: SO_0000673
so part of: MARK4
location: join(272362..272638,273636..273833,274237..274290,274419..274467,274549..274614,274846..274916,275402..275458,276191..276427,276643..276762,277168..277267,277376..277535,277617..277740,277893..278107,278639..278749,278838..279101,279178..279261,280529..280573,281586..281785)
location: region:272362-281785:1
so has part: feature:272362-272638:1:exon
so has part: feature:273636-273833:1:exon
so has part: feature:274237-274290:1:exon
so has part: feature:274419-274467:1:exon
so has part: feature:274549-274614:1:exon
so has part: feature:274846-274916:1:exon
so has part: feature:275402-275458:1:exon
so has part: feature:276191-276427:1:exon
so has part: feature:276643-276762:1:exon
so has part: feature:277168-277267:1:exon
so has part: feature:277376-277535:1:exon
so has part: feature:277617-277740:1:exon
so has part: feature:277893-278107:1:exon
so has part: feature:278639-278749:1:exon
so has part: feature:278838-279101:1:exon
so has part: feature:279178-279261:1:exon
so has part: feature:280529-280573:1:exon
so has part: feature:281586-281785:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:272362-272638:1:exon

position:272638:1
position: 272638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:273636-273833:1:exon

position:273636:1
position: 273636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273833:1
position: 273833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:274237-274290:1:exon

position:274237:1
position: 274237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274290:1
position: 274290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:274419-274467:1:exon

position:274419:1
position: 274419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274467:1
position: 274467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:274549-274614:1:exon

position:274549:1
position: 274549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274614:1
position: 274614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:274846-274916:1:exon

position:274846:1
position: 274846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274916:1
position: 274916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:275402-275458:1:exon

position:275402:1
position: 275402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275458:1
position: 275458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:276191-276427:1:exon

position:276191:1
position: 276191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276427:1
position: 276427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:276643-276762:1:exon

position:276643:1
position: 276643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276762:1
position: 276762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:277168-277267:1:exon

position:277168:1
position: 277168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277267:1
position: 277267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:277376-277535:1:exon

position:277376:1
position: 277376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277535:1
position: 277535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:277617-277740:1:exon

position:277617:1
position: 277617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277740:1
position: 277740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:277893-278107:1:exon

position:277893:1
position: 277893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278107:1
position: 278107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:278639-278749:1:exon

position:278639:1
position: 278639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278749:1
position: 278749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:278838-279101:1:exon

position:278838:1
position: 278838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279101:1
position: 279101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:279178-279261:1:exon

position:279178:1
position: 279178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279261:1
position: 279261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:280529-280573:1:exon

position:280529:1
position: 280529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280573:1
position: 280573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:281586-281785:1:exon

position:281586:1
position: 281586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MARK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 345164
gene: MARK4
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: MAP/microtubule affinity-regulating kinase 4
translation: MSSRSALAAGNERNADTLTGLGGSRSEKGSAWSSRSLGARCRNSIASCPEEQPHIGNYRLLRTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKGLNHPNIVKLFEVIETEKTLYLVMEYASAGEVFDYLVSHGRMKEKEARAKFRQIVSAVHYCHQKNIVHRDLKAENLLLDADANIKIADFGFSNEFTLGSKLDTFCGSPPYAAPELFQGKKYDGPEVDIWSLGVILYTLVSGSLPFDGHNLKELRERVLRGKYRVPFYMSTDCENILRRFLVLNPAKRCTLEQIMKDKWINIGYEGDELKPYKEPEEDFGDAKRIEVMVGMGYTREEIKESLSNQKYNEVTATYLLLGRKNEVRWHRGGTHGPHVGGGGLSLARVRAPSEAANGTGKAAAHGKSQRGATTYHRQRXHSDFCGPSPVPMHPKRSPTSAGEGELKEERVPPRKASCSVGGGGRGVPPSSPMVSSANNPNKAEIPDRHKDGAINANNLPPSVMARRNTYVCTERPGTERHPLLPNGKENRSGLRHRPGAPPPPPPAHSIAAASSERARLARGTGVRSTFHGGQIRDRRPVGGSNGPPASPPLAPEASPLPQSRSRATSNLFSKLTSKLTRRVTLDPSKRQSSNRCVSGTPAPPGAKIRSQTNLRESGDLRSQVAIYLGIKRKPNPGCSDAPGM
SIO_010081: MARK4
subclass of: SO_0000673
so part of: MARK4
location: join(272588..272638,273636..273833,274237..274290,274419..274467,274549..274614,274846..274916,275402..275458,276191..276427,276643..276762,277168..277267,277376..277535,277617..277740,277893..278107,278639..278749,278838..279101,279178..279261,280529..280573,281586..281650)
location: region:272588-281650:1
so has part: feature:272588-272638:1:exon
so has part: feature:273636-273833:1:exon
so has part: feature:274237-274290:1:exon
so has part: feature:274419-274467:1:exon
so has part: feature:274549-274614:1:exon
so has part: feature:274846-274916:1:exon
so has part: feature:275402-275458:1:exon
so has part: feature:276191-276427:1:exon
so has part: feature:276643-276762:1:exon
so has part: feature:277168-277267:1:exon
so has part: feature:277376-277535:1:exon
so has part: feature:277617-277740:1:exon
so has part: feature:277893-278107:1:exon
so has part: feature:278639-278749:1:exon
so has part: feature:278838-279101:1:exon
so has part: feature:279178-279261:1:exon
so has part: feature:280529-280573:1:exon
so has part: feature:281586-281650:1:exon

XP_055553959.1
type: Protein
SIO_000068: ncbiprotein

position:272588:1
position: 272588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281650:1
position: 281650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272588-272638:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:273636-273833:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:274237-274290:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:274419-274467:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:274549-274614:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:274846-274916:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:275402-275458:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:276191-276427:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:276643-276762:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:277168-277267:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:277376-277535:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:277617-277740:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:277893-278107:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:278639-278749:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:278838-279101:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:279178-279261:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:280529-280573:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:281586-281650:1:exon

CKM
type: Gene
subclass of: SO_0000704
RO_0002162: 345164
gene: CKM
note: creatine kinase, M-type; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(283184..285070)
location: region:283184-285070:-1
so has part: feature:283184-285070:-1:exon
subclass of: SO_0000010

102045686
type: Gene
SIO_000068: ncbigene

position:283184:-1
position: 283184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285070:-1
position: 285070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283184-285070:-1:exon

CKM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 345164
gene: CKM
product: creatine kinase, M-type
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055697985.1
SIO_010081: CKM
subclass of: SO_0000673
so part of: CKM
location: complement(join(283184..283416,283874..284063,284272..284393,284815..285070))
location: region:283184-285070:-1
so has part: feature:284815-285070:-1:exon
so has part: feature:284272-284393:-1:exon
so has part: feature:283874-284063:-1:exon
so has part: feature:283184-283416:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:284815-285070:-1:exon

position:284815:-1
position: 284815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:284272-284393:-1:exon

position:284272:-1
position: 284272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284393:-1
position: 284393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:283874-284063:-1:exon

position:283874:-1
position: 283874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284063:-1
position: 284063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:283184-283416:-1:exon

position:283416:-1
position: 283416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CKM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 345164
gene: CKM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: creatine kinase M-type
translation: MVGLTGAGGHGPADPHPPTPPPALNSLDGEFKGKYYPLKAMTEQEQQQLIDDHFLFDKPVSPLLLASGMARDWPDARGIWYNDNKTFLVWVNEEDHLRVISMEKGGNMKEVFRRFCVGLKKIEEIFKKAGHPFMWTEHLGYILTCPSNLGTGLRGGVHVRLPKLSQHPKFEEILKRLRLQKRGTGGVDTAAVGAVFDISNADRLGSSEVEQVQLVVDGVKLMVEMEKKLEQNQPIDDMIPAQK
SIO_010081: CKM
subclass of: SO_0000673
so part of: CKM
location: complement(join(283238..283416,283874..284063,284272..284393,284815..285055))
location: region:283238-285055:-1
so has part: feature:284815-285055:-1:exon
so has part: feature:284272-284393:-1:exon
so has part: feature:283874-284063:-1:exon
so has part: feature:283238-283416:-1:exon

XP_055553960.1
type: Protein
SIO_000068: ncbiprotein

position:283238:-1
position: 283238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285055:-1
position: 285055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284815-285055:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:284272-284393:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283874-284063:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283238-283416:-1:exon