Falco cherrug isolate bFalChe1 chromosome 21, bFalChe1.pri, whole genome shotgun sequence.
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Falconiformes; Falconidae; Falco.
REFSEQ INFORMATION: The reference sequence is identical to\nCM042469.1.\nAssembly name: bFalChe1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2022/06/02. The original whole-genome shotgun project has the\naccession JAMOAL000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 14-DEC-2021\nAssembly Method :: Hifiasm v. 0.13.0; purge_dups v. 1.2.3;\n bionano solve v. 3.6.1; salsa2 v. 2.2\nAssembly Name :: bFalChe1.pri\nDiploid :: Principal Pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 35.49x\nSequencing Technology :: PacBio Sequel II HiFi; Arima Genomics\n Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Full annotation\nAnnotation Name :: GCF_023634085.1-RS_2023_04\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Best-placed RefSeq; Gnomon;\n cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 04/26/2023\n##Genome-Annotation-Data-END##
Farooq Omar Al-Ajli, Souq Waqif Falcon Hospital
DEAH-box helicase 16; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon.
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
chromosome 21 C6orf136 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: uncharacterized protein C6orf136 homolog
alpha tubulin acetyltransferase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
alpha tubulin acetyltransferase 1, transcript variant X1
COORDINATES: polyA evidence [ECO:0006239]
alpha-tubulin N-acetyltransferase 1 isoform X1
alpha tubulin acetyltransferase 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
alpha-tubulin N-acetyltransferase 1 isoform X2
mitochondrial ribosomal protein S18B; Derived by automated computational analysis using gene prediction method: Gnomon.
mitochondrial ribosomal protein S18B, transcript variant X2
mitochondrial ribosomal protein S18B, transcript variant X1
28S ribosomal protein S18b, mitochondrial isoform X2
28S ribosomal protein S18b, mitochondrial isoform X1
protein phosphatase 1 regulatory subunit 10; Derived by automated computational analysis using gene prediction method: Gnomon.
protein phosphatase 1 regulatory subunit 10, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 2 Proteins
protein phosphatase 1 regulatory subunit 10, transcript variant X4
protein phosphatase 1 regulatory subunit 10, transcript variant X2
protein phosphatase 1 regulatory subunit 10, transcript variant X5
protein phosphatase 1 regulatory subunit 10, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 1 Protein
protein phosphatase 1 regulatory subunit 10, transcript variant X6
serine/threonine-protein phosphatase 1 regulatory subunit 10 isoform X1
serine/threonine-protein phosphatase 1 regulatory subunit 10 isoform X2
ATP binding cassette subfamily F member 1; Derived by automated computational analysis using gene prediction method: Gnomon.
ATP binding cassette subfamily F member 1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: ATP-binding cassette sub-family F member 1
G protein nucleolar 1 (putative); Derived by automated computational analysis using gene prediction method: Gnomon.
guanine nucleotide-binding protein-like 1
ribonuclease P/MRP subunit p21; Derived by automated computational analysis using gene prediction method: Gnomon.
ribonuclease P/MRP subunit p21, transcript variant X1
ribonuclease P protein subunit p21 isoform X1
ribonuclease P/MRP subunit p21, transcript variant X2
ribonuclease P protein subunit p21 isoform X2
tripartite motif containing 39; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 47 Proteins
protein phosphatase 1 regulatory inhibitor subunit 11; Derived by automated computational analysis using gene prediction method: Gnomon.
protein phosphatase 1 regulatory inhibitor subunit 11
RNA polymerase I subunit H; Derived by automated computational analysis using gene prediction method: Gnomon.
RNA polymerase I subunit H, transcript variant X1
RNA polymerase I subunit H, transcript variant X2
DNA-directed RNA polymerase I subunit RPA12
alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase; Derived by automated computational analysis using gene prediction method: Gnomon.
alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase
LOW QUALITY PROTEIN: alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase
E3 ubiquitin-protein ligase TRIM11-like; Derived by automated computational analysis using gene prediction method: Gnomon.
E3 ubiquitin-protein ligase TRIM11-like, transcript variant X2
E3 ubiquitin-protein ligase TRIM11-like, transcript variant X1
E3 ubiquitin-protein ligase TRIM11-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
E3 ubiquitin-protein ligase TRIM11-like isoform X2
E3 ubiquitin-protein ligase TRIM11-like isoform X1
butyrophilin subfamily 1 member A1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
butyrophilin subfamily 1 member A1-like, transcript variant X2
butyrophilin subfamily 1 member A1-like, transcript variant X7
butyrophilin subfamily 1 member A1-like, transcript variant X9
butyrophilin subfamily 1 member A1-like, transcript variant X5
butyrophilin subfamily 1 member A1-like, transcript variant X3
butyrophilin subfamily 1 member A1-like, transcript variant X8
butyrophilin subfamily 1 member A1-like, transcript variant X6
butyrophilin subfamily 1 member A1-like, transcript variant X4
butyrophilin subfamily 1 member A1-like, transcript variant X1
C-type lectin domain family 2 member E-like; Derived by automated computational analysis using gene prediction method: Gnomon.
C-type lectin domain family 2 member E-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
C-type lectin domain family 2 member E-like, transcript variant X1
C-type lectin domain family 2 member D-like isoform X1
C-type lectin domain family 2 member E-like isoform X2
killer cell lectin-like receptor subfamily B member 1B allele A; Derived by automated computational analysis using gene prediction method: Gnomon.
killer cell lectin-like receptor subfamily B member 1B allele A
C-type lectin domain family 2 member D-like; Derived by automated computational analysis using gene prediction method: Gnomon.
C-type lectin domain family 2 member D-like, transcript variant X1
C-type lectin domain family 2 member D-like, transcript variant X3
C-type lectin domain family 2 member D-like, transcript variant X7
C-type lectin domain family 2 member D-like, transcript variant X6
C-type lectin domain family 2 member D-like, transcript variant X2
C-type lectin domain family 2 member D-like, transcript variant X5
C-type lectin domain family 2 member D-like, transcript variant X8
C-type lectin domain family 2 member D-like, transcript variant X4
C-type lectin domain family 2 member D-like isoform X2
C-type lectin domain family 2 member G-like; Derived by automated computational analysis using gene prediction method: Gnomon.
C-type lectin domain family 2 member G-like, transcript variant X2
C-type lectin domain family 2 member G-like, transcript variant X1
C-type lectin domain family 2 member G-like, transcript variant X5
C-type lectin domain family 2 member G-like isoform X3
C-type lectin domain family 2 member G-like isoform X2
C-type lectin domain family 2 member G-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins
C-type lectin domain family 2 member G-like, transcript variant X4
zinc finger protein 692; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger protein 692, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 8 Proteins
zinc finger protein 692, transcript variant X1
E3 ubiquitin-protein ligase TRIM7-like; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger protein 345-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 47 Proteins
zinc finger protein CKR1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger protein CKR1-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins
zinc finger protein CKR1-like, transcript variant X2
zinc finger protein CKR1-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 26 Proteins
zinc finger protein CKR1-like isoform X2
zinc finger protein CKR1-like isoform X1
interleukin 4 induced 1; Derived by automated computational analysis using gene prediction method: Gnomon.
interleukin 4 induced 1, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
interleukin 4 induced 1, transcript variant X2
interleukin 4 induced 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 Proteins
transfer RNA asparagine (anticodon GUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA threonine (anticodon UGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA leucine (anticodon AAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA valine (anticodon AAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA proline (anticodon UGG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
E3 ubiquitin-protein ligase TRIM7-like, transcript variant X1
E3 ubiquitin-protein ligase TRIM7-like, transcript variant X2
E3 ubiquitin-protein ligase TRIM7-like isoform X1
E3 ubiquitin-protein ligase TRIM7-like isoform X2
uncharacterized LOC129734451; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC129734451, transcript variant X2
uncharacterized LOC129734451, transcript variant X1
transfer RNA lysine (anticodon CUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA glutamic acid (anticodon CUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA glutamic acid (anticodon UUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA leucine (anticodon CAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
E3 ubiquitin-protein ligase TRIM39-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
E3 ubiquitin-protein ligase TRIM39-like, transcript variant X2
E3 ubiquitin-protein ligase TRIM39-like, transcript variant X1
E3 ubiquitin-protein ligase TRIM39-like isoform X2
uncharacterized LOC106630876; Derived by automated computational analysis using gene prediction method: Gnomon.
E3 ubiquitin-protein ligase TRIM7; Derived by automated computational analysis using gene prediction method: Gnomon.
E3 ubiquitin-protein ligase TRIM7, transcript variant X1
E3 ubiquitin-protein ligase TRIM7, transcript variant X2
E3 ubiquitin-protein ligase TRIM7 isoform X2
E3 ubiquitin-protein ligase TRIM7 isoform X1
E3 ubiquitin-protein ligase TRIM41; Derived by automated computational analysis using gene prediction method: Gnomon.
receptor for activated C kinase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
receptor of activated protein C kinase 1
tripartite motif-containing protein 10-like; Derived by automated computational analysis using gene prediction method: Gnomon.
tripartite motif-containing protein 10-like, transcript variant X2
tripartite motif-containing protein 10-like, transcript variant X4
tripartite motif-containing protein 10-like, transcript variant X5
tripartite motif-containing protein 10-like, transcript variant X22
tripartite motif-containing protein 10-like, transcript variant X21
tripartite motif-containing protein 10-like, transcript variant X23
tripartite motif-containing protein 10-like, transcript variant X24
tripartite motif-containing protein 10-like, transcript variant X10
tripartite motif-containing protein 10-like, transcript variant X11
tripartite motif-containing protein 10-like, transcript variant X16
tripartite motif-containing protein 10-like, transcript variant X7
tripartite motif-containing protein 10-like, transcript variant X6
tripartite motif-containing protein 10-like, transcript variant X8
tripartite motif-containing protein 10-like, transcript variant X12
tripartite motif-containing protein 10-like, transcript variant X13
tripartite motif-containing protein 10-like, transcript variant X1
tripartite motif-containing protein 10-like, transcript variant X3
tripartite motif-containing protein 10-like, transcript variant X9
tripartite motif-containing protein 10-like, transcript variant X14
tripartite motif-containing protein 10-like, transcript variant X15
tripartite motif-containing protein 10-like, transcript variant X18
tripartite motif-containing protein 10-like, transcript variant X19
tripartite motif-containing protein 10-like, transcript variant X17
tripartite motif-containing protein 10-like, transcript variant X20
tripartite motif-containing protein 10-like isoform X1
tripartite motif-containing protein 10-like isoform X6
tripartite motif-containing protein 15-like isoform X7
tripartite motif-containing protein 10-like isoform X12
tripartite motif-containing protein 15-like isoform X5
tripartite motif-containing protein 10-like isoform X10
tripartite motif-containing protein 10-like isoform X11
tripartite motif-containing protein 10-like isoform X3
tripartite motif-containing protein 10-like isoform X2
tripartite motif-containing protein 10-like isoform X4
tripartite motif-containing protein 10-like isoform X8
tripartite motif-containing protein 10-like isoform X9
uncharacterized protein LOC106630874 isoform X15
uncharacterized protein LOC106630874 isoform X14
uncharacterized protein LOC106630874 isoform X16
uncharacterized protein LOC106630874 isoform X17
tripartite motif-containing protein 10-like isoform X13
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
uncharacterized LOC114014765; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger protein 883-like; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger protein 883-like, transcript variant X4
zinc finger protein 883-like, transcript variant X1
zinc finger protein 883-like, transcript variant X2
zinc finger protein 883-like, transcript variant X3
zinc finger protein OZF-like; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger protein OZF-like, transcript variant X2
zinc finger protein OZF-like, transcript variant X1
zinc finger and SCAN domain-containing protein 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger and SCAN domain-containing protein 2-like, transcript variant X4
zinc finger protein 501-like; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger and SCAN domain-containing protein 2-like, transcript variant X1
zinc finger and SCAN domain-containing protein 2-like, transcript variant X2
zinc finger and SCAN domain-containing protein 2-like, transcript variant X3
zinc finger and SCAN domain-containing protein 2-like isoform X1
zinc finger and SCAN domain-containing protein 2-like isoform X2
uncharacterized LOC129734450; Derived by automated computational analysis using gene prediction method: Gnomon.
LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated; Derived by automated computational analysis using gene prediction method: Gnomon.
LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, transcript variant X1
LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, transcript variant X2
U6 snRNA-associated Sm-like protein LSm2 isoform X1
U6 snRNA-associated Sm-like protein LSm2 isoform X2
endoplasmic reticulum-Golgi intermediate compartment protein 3-like; Derived by automated computational analysis using gene prediction method: Gnomon.
endoplasmic reticulum-Golgi intermediate compartment protein 3-like, transcript variant X10
endoplasmic reticulum-Golgi intermediate compartment protein 3-like, transcript variant X5
endoplasmic reticulum-Golgi intermediate compartment protein 3-like isoform X5
endoplasmic reticulum-Golgi intermediate compartment protein 3-like, transcript variant X7
endoplasmic reticulum-Golgi intermediate compartment protein 3-like, transcript variant X6
endoplasmic reticulum-Golgi intermediate compartment protein 3-like, transcript variant X3
endoplasmic reticulum-Golgi intermediate compartment protein 3-like isoform X3
endoplasmic reticulum-Golgi intermediate compartment protein 3-like isoform X7
endoplasmic reticulum-Golgi intermediate compartment protein 3-like isoform X6
endoplasmic reticulum-Golgi intermediate compartment protein 3-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA
endoplasmic reticulum-Golgi intermediate compartment protein 3-like, transcript variant X2
endoplasmic reticulum-Golgi intermediate compartment protein 3-like, transcript variant X1
endoplasmic reticulum-Golgi intermediate compartment protein 3-like, transcript variant X9
endoplasmic reticulum-Golgi intermediate compartment protein 3-like, transcript variant X8
endoplasmic reticulum-Golgi intermediate compartment protein 3-like isoform X2
endoplasmic reticulum-Golgi intermediate compartment protein 3-like isoform X1
endoplasmic reticulum-Golgi intermediate compartment protein 3-like isoform X4
uncharacterized LOC106631267; Derived by automated computational analysis using gene prediction method: Gnomon.
vigilin-like; Derived by automated computational analysis using gene prediction method: Gnomon.