Falco cherrug mitochondrion, complete genome.
type: Entry
definition: Falco cherrug mitochondrion, complete genome.
sequence version: NC_026715.1
sequence date: 2023-04-03
sequence: sequence
division: VRT
label: NC_026715.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA927338
keyword: RefSeq
source: mitochondrion Falco cherrug (Saker falcon)
organism: Falco cherrug
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Falconiformes; Falconidae; Falco.
reference: 1
reference: 2
reference: 3
reference: 4
comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The\nreference sequence is identical to KP337902.\n\n##Assembly-Data-START##\nAssembly Method :: SPAdes v. 3.0.0\nAssembly Name :: 22\nCoverage :: 141\nSequencing Technology :: Illumina\n##Assembly-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000819
sequence length: 18059
topology: circular
so has quality: SO_0000988
location: 1..18059
location: region:1-18059:1
RO_0002162: 345164

NC_026715
type: RefSeq
SIO_000068: refseq

PRJNA927338
type: BioProject
SIO_000068: bioproject

1
title: Complete mitochondrial genome of the Falco cherrug (Saker falcon) Repetitive sequences in thecontrol region
author: Lu, J. Jr.
journal: Unpublished

2
title: Translational frameshifting in animal mitochondrial DNA
author: Mindell, D.P.
author: Sorenson, M.D.
author: Dimcheff, D.E.
journal: Unpublished

3
title: Direct Submission
journal: Submitted (17-MAR-2015) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

4
title: Direct Submission
author: Lu, J. Jr.
journal: Submitted (02-JAN-2015) College of Life Science, University of Chinese Academy of Sciences, Beijing, China, No. 19A Yuquan Road, Beijing, Beijing 10049, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18059:1
position: 18059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-18059:1:source
so part of: sequence
organism: Falco cherrug
organelle: mitochondrion
mol type: genomic DNA

345164
type: Taxonomy
SIO_000068: taxonomy

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 345164
product: tRNA-Phe
so part of: sequence
location: 1..73
location: region:1-73:1
so has part: feature:1-73:1:region

position:73:1
position: 73
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-73:1:region

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 345164
product: 12S ribosomal RNA
so part of: sequence
location: 74..1055
location: region:74-1055:1
so has part: feature:74-1055:1:region

position:74:1
position: 74
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1055:1
position: 1055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74-1055:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 345164
product: tRNA-Val
so part of: sequence
location: 1056..1128
location: region:1056-1128:1
so has part: feature:1056-1128:1:region

position:1056:1
position: 1056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1128:1
position: 1128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1056-1128:1:region

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 345164
product: 16S ribosomal RNA
so part of: sequence
location: 1129..2727
location: region:1129-2727:1
so has part: feature:1129-2727:1:region

position:1129:1
position: 1129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2727:1
position: 2727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1129-2727:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 345164
product: tRNA-Leu
codon recognized: UUR
so part of: sequence
location: 2728..2801
location: region:2728-2801:1
so has part: feature:2728-2801:1:region

position:2728:1
position: 2728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2801:1
position: 2801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2728-2801:1:region

ND1
type: Gene
subclass of: SO_0000704
RO_0002162: 345164
gene: ND1
so part of: sequence
location: 2817..3791
location: region:2817-3791:1
so has part: feature:2817-3791:1:exon
subclass of: SO_0000010

23808611
type: Gene
SIO_000068: ncbigene

position:2817:1
position: 2817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3791:1
position: 3791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2817-3791:1:exon

ND1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 345164
gene: ND1
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 1
translation: MTQPTPLMHLTMFLAYALPILIAVAFLTLVERKVLSYMQARKGPNIVGPFGLLQPVADGVKLFTKEPIRPSTSSPLLFTLTPMLALLLAVSIWTPLPLPFSLADLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSMIMLSGNYTLNTLATTQEPLYLIFSTWPLMMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMNTLTAILFINPSSLDLPPELFPMILATKTLLLSFGFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCLWHTSMPICYAGLPPA
SIO_010081: ND1
subclass of: SO_0000673
so part of: ND1
location: 2817..3791
location: region:2817-3791:1
so has part: feature:2817-3791:1:exon

YP_009128607.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2817-3791:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 345164
product: tRNA-Ile
so part of: sequence
location: 3807..3879
location: region:3807-3879:1
so has part: feature:3807-3879:1:region

position:3807:1
position: 3807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3879:1
position: 3879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3807-3879:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 345164
product: tRNA-Gln
so part of: sequence
location: complement(3889..3959)
location: region:3889-3959:-1
so has part: feature:3889-3959:-1:region

position:3889:-1
position: 3889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3959:-1
position: 3959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3889-3959:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 345164
product: tRNA-Met
so part of: sequence
location: 3959..4030
location: region:3959-4030:1
so has part: feature:3959-4030:1:region

position:3959:1
position: 3959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4030:1
position: 4030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3959-4030:1:region

ND2
type: Gene
subclass of: SO_0000704
RO_0002162: 345164
gene: ND2
so part of: sequence
location: 4032..5071
location: region:4032-5071:1
so has part: feature:4032-5071:1:exon
subclass of: SO_0000010

23808610
type: Gene
SIO_000068: ncbigene

position:4032:1
position: 4032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5071:1
position: 5071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4032-5071:1:exon

ND2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 345164
gene: ND2
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:5070..5071,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 2
translation: MSPLTKLMFSLSLLLGTTITISSNHWMLAWTGLEINTLAIIPFISKSHHPRAVEAAIKYFLIQATASALILFSSTINAQLTGQWDITQLTQPVASLLLTMAVAMKLGLVPFHFWFPEVMQGSPMTTALLLSTLMKLPPITILFLTAPSLNPLLLTTMAIASAAVGGWMGLNQTQIRKILAFSSIAHLGWMTIILMYNPKLTMMSFYLYSLMTASIFLALNTTNSLKLSTMMTSWTKMPSLNASLTLALLSLAGLPPLPGFLPKWLIIQELTKQEMSTTAMIISMLSLLGLFFYLRLAYCSTITLPPNTTNFMKQWYSNKPTNTPTAALISLSILLLPLSPTILTIT
SIO_010081: ND2
subclass of: SO_0000673
so part of: ND2
location: 4032..5071
location: region:4032-5071:1
so has part: feature:4032-5071:1:exon

YP_009128608.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4032-5071:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 345164
product: tRNA-Trp
so part of: sequence
location: 5072..5148
location: region:5072-5148:1
so has part: feature:5072-5148:1:region

position:5072:1
position: 5072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5148:1
position: 5148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5072-5148:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 345164
product: tRNA-Ala
so part of: sequence
location: complement(5159..5228)
location: region:5159-5228:-1
so has part: feature:5159-5228:-1:region

position:5159:-1
position: 5159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5228:-1
position: 5228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5159-5228:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 345164
product: tRNA-Asn
so part of: sequence
location: complement(5239..5311)
location: region:5239-5311:-1
so has part: feature:5239-5311:-1:region

position:5239:-1
position: 5239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5311:-1
position: 5311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5239-5311:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 345164
product: tRNA-Cys
so part of: sequence
location: complement(5314..5380)
location: region:5314-5380:-1
so has part: feature:5314-5380:-1:region

position:5314:-1
position: 5314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5380:-1
position: 5380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5314-5380:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 345164
product: tRNA-Tyr
so part of: sequence
location: complement(5380..5450)
location: region:5380-5450:-1
so has part: feature:5380-5450:-1:region

position:5450:-1
position: 5450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5380-5450:-1:region

COX1
type: Gene
subclass of: SO_0000704
RO_0002162: 345164
gene: COX1
so part of: sequence
location: 5452..7002
location: region:5452-7002:1
so has part: feature:5452-7002:1:exon
subclass of: SO_0000010

23808613
type: Gene
SIO_000068: ncbigene

position:5452:1
position: 5452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7002:1
position: 7002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5452-7002:1:exon

COX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 345164
gene: COX1
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit I
translation: MTFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRTELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGVGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTAINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYAGKKEPFGYMGMVWAMLSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGIKVFSWLATLHGGTIKWDPPMLWALGFIFLFTIGGLTGIVLANSSLDIALHDTYYVVAHFHYVLSMGAVFAILAGFTHWFPLFTGYTLHPTWSKTHFGIMFTGVNLTFFPQHFLGLAGMPRRYSDYPDAYTLWNTLSSIGSLISMTAVILLMFIIWEAFAAKRKVLQTELTSTNIEWIYGCPPPYHTFEEPTFVQTQE
SIO_010081: COX1
subclass of: SO_0000673
so part of: COX1
location: 5452..7002
location: region:5452-7002:1
so has part: feature:5452-7002:1:exon

YP_009128609.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5452-7002:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 345164
product: tRNA-Ser
codon recognized: UCN
so part of: sequence
location: complement(6994..7067)
location: region:6994-7067:-1
so has part: feature:6994-7067:-1:region

position:6994:-1
position: 6994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7067:-1
position: 7067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6994-7067:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 345164
product: tRNA-Asp
so part of: sequence
location: 7070..7135
location: region:7070-7135:1
so has part: feature:7070-7135:1:region

position:7070:1
position: 7070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7135:1
position: 7135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7070-7135:1:region

COX2
type: Gene
subclass of: SO_0000704
RO_0002162: 345164
gene: COX2
so part of: sequence
location: 7142..7825
location: region:7142-7825:1
so has part: feature:7142-7825:1:exon
subclass of: SO_0000010

23808612
type: Gene
SIO_000068: ncbigene

position:7142:1
position: 7142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7825:1
position: 7825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7142-7825:1:exon

COX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 345164
gene: COX2
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit II
translation: MANQSQLGFQDASSPIMEELVEFHDHALMVALAICSLVLYLLTLMLAEKLSSNTVDAQEVELIWTILPAIVLILLALPSLQILYMMDEIDEPDLTLKAIGHQWYWAYEYTDFKDLTFDSYMIPTTELPSGHFRLLEVDHRIVIPMESPIRIIITANDVLHSWAVPSLGVKTDAIPGRLNQTSFITTRPGVFYGQCSEICGANHSYMPIVVESTPLTHFEHWSTLLSS
SIO_010081: COX2
subclass of: SO_0000673
so part of: COX2
location: 7142..7825
location: region:7142-7825:1
so has part: feature:7142-7825:1:exon

YP_009128610.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7142-7825:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 345164
product: tRNA-Lys
so part of: sequence
location: 7827..7897
location: region:7827-7897:1
so has part: feature:7827-7897:1:region

position:7827:1
position: 7827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7897:1
position: 7897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7827-7897:1:region

ATP8
type: Gene
subclass of: SO_0000704
RO_0002162: 345164
gene: ATP8
so part of: sequence
location: 7899..8066
location: region:7899-8066:1
so has part: feature:7899-8066:1:exon
subclass of: SO_0000010

23808601
type: Gene
SIO_000068: ncbigene

position:7899:1
position: 7899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8066:1
position: 8066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7899-8066:1:exon

ATP8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 345164
gene: ATP8
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 8
translation: MPQLNPNPWFLTMLTTWAIFLLIIQPKLLPFTPTNSPMNKTNTSNKSTPWTWPWT
SIO_010081: ATP8
subclass of: SO_0000673
so part of: ATP8
location: 7899..8066
location: region:7899-8066:1
so has part: feature:7899-8066:1:exon

YP_009128611.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7899-8066:1:exon

ATP6
type: Gene
subclass of: SO_0000704
RO_0002162: 345164
gene: ATP6
so part of: sequence
location: 8057..8740
location: region:8057-8740:1
so has part: feature:8057-8740:1:exon
subclass of: SO_0000010

23808602
type: Gene
SIO_000068: ncbigene

position:8057:1
position: 8057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8740:1
position: 8740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8057-8740:1:exon

ATP6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 345164
gene: ATP6
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 6
translation: MNLSFFDQFSSPYLMGMPLALLSILFPTLLFPSPSTRWINNRLVTLQSWLIHLITKQLMMPLDKKGHKWALILTSLMMLLLTINLLGLLPYTFTPTTQLSMNMALAFPLWLATLLTGLRNQPTTSLGHLLPEGTPTPLIPALIMIETTSLLIRPLALGVRLTANLTAGHLLIQLISTATVTLLPIMPAISTLTMLVLLLLTILEVAVAMIQAYVFVLLLSLYLQENI
SIO_010081: ATP6
subclass of: SO_0000673
so part of: ATP6
location: 8057..8740
location: region:8057-8740:1
so has part: feature:8057-8740:1:exon

YP_009128612.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8057-8740:1:exon

COX3
type: Gene
subclass of: SO_0000704
RO_0002162: 345164
gene: COX3
so part of: sequence
location: 8740..9523
location: region:8740-9523:1
so has part: feature:8740-9523:1:exon
subclass of: SO_0000010

23808603
type: Gene
SIO_000068: ncbigene

position:9523:1
position: 9523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8740-9523:1:exon

COX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 345164
gene: COX3
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:9523,aa:TERM)
transl table: 2
product: cytochrome c oxidase subunit III
translation: MAHQAHPFHMVDPSPWPISGAAAALLTTSGLAMWFHHKSPQLLTLGLLSMILVMLQWWRDIIREGTFQGHHTLPVQKGLRYGMILFITSEVFFFLGFFWAFFHSSLAPTPELGGQWPPTGIKPMNPMEVPLLNTAILLASGVTVTWTHHSITEGNRKQAIQALSLTILLGAYFTILQAMEYYEAPFSIADSVYGSTFFVATGFHGLHVIIGSSFLSICLLRLINFHFTPSHHFGFEAAAWYWHFVDVIWLFLYMTIYWWGS
SIO_010081: COX3
subclass of: SO_0000673
so part of: COX3
location: 8740..9523
location: region:8740-9523:1
so has part: feature:8740-9523:1:exon

YP_009128613.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8740-9523:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 345164
product: tRNA-Gly
so part of: sequence
location: 9524..9592
location: region:9524-9592:1
so has part: feature:9524-9592:1:region

position:9524:1
position: 9524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9592:1
position: 9592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9524-9592:1:region

ND3
type: Gene
subclass of: SO_0000704
RO_0002162: 345164
gene: ND3
so part of: sequence
location: 9593..9944
location: region:9593-9944:1
so has part: feature:9593-9944:1:exon
subclass of: SO_0000010

23808604
type: Gene
SIO_000068: ncbigene

position:9593:1
position: 9593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9944:1
position: 9944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9593-9944:1:exon

ND3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 345164
gene: ND3
note: frameshift mechanism unknown (Mindell et al., 1998, Mol. Biol. Evol., 15:1568-1571)
citation: [2]
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 3
translation: MNTILFMLTLSLALSIILISLNFWLAQTTPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQSPTTTLIWTLLIITLLTLGLIYEWLQGGLEWAE
SIO_010081: ND3
subclass of: SO_0000673
so part of: ND3
location: join(9593..9766,9768..9944)
location: region:9593-9944:1
so has part: feature:9593-9766:1:exon
so has part: feature:9768-9944:1:exon

YP_009128614.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9593-9766:1:exon

position:9766:1
position: 9766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9768-9944:1:exon

position:9768:1
position: 9768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 345164
product: tRNA-Arg
so part of: sequence
location: 9946..10014
location: region:9946-10014:1
so has part: feature:9946-10014:1:region

position:9946:1
position: 9946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10014:1
position: 10014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9946-10014:1:region

ND4L
type: Gene
subclass of: SO_0000704
RO_0002162: 345164
gene: ND4L
so part of: sequence
location: 10016..10312
location: region:10016-10312:1
so has part: feature:10016-10312:1:exon
subclass of: SO_0000010

23808605
type: Gene
SIO_000068: ncbigene

position:10016:1
position: 10016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10312:1
position: 10312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10016-10312:1:exon

ND4L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 345164
gene: ND4L
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 4L
translation: MSLMCLSYCSAFTLSSLGLTLHRTHLISALLCLESMMLSMYIALSVLPTENQAASLTLTPILMLTFSACEAGTGLAMLVASTRTHGSDHLHNLNLLQC
SIO_010081: ND4L
subclass of: SO_0000673
so part of: ND4L
location: 10016..10312
location: region:10016-10312:1
so has part: feature:10016-10312:1:exon

YP_009128615.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10016-10312:1:exon

ND4
type: Gene
subclass of: SO_0000704
RO_0002162: 345164
gene: ND4
so part of: sequence
location: 10306..11683
location: region:10306-11683:1
so has part: feature:10306-11683:1:exon
subclass of: SO_0000010

23808606
type: Gene
SIO_000068: ncbigene

position:10306:1
position: 10306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11683:1
position: 11683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10306-11683:1:exon

ND4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 345164
gene: ND4
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:11683,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 4
translation: MLKILLPTLLLPPTALLSPAKFLWINTTIHSLMIALLSLHWLLPTYYPSKTLTQWTGMDQISSSLLTLTCWLLPLMILASQNHLQHEPAPRKRIFILTLTLTQPLIILAFSATELTLFYVSFEATLIPTLALITRWGNQPDRLSAGIYLLFYTLISSLPLLVTILALHSQTGTLHLLMMKLNHPTMPHSWTGLLSTLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRMTLLMNPLLNHLHYPFIALALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVIAASMIQTPWSFSGAMILMVSHGLTSSMLFCLANTNYERTHSRILLMTRGLQSLLPLMATWWLLANLTNMALPPTTNLMAELTIITALFNWSTPTIILTGTATLMTASYTLYLLLTTQRGITPTHITSLQNSNTREHLLMILHILPLILLILKPNLMSGIPQ
SIO_010081: ND4
subclass of: SO_0000673
so part of: ND4
location: 10306..11683
location: region:10306-11683:1
so has part: feature:10306-11683:1:exon

YP_009128616.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10306-11683:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 345164
product: tRNA-His
so part of: sequence
location: 11684..11754
location: region:11684-11754:1
so has part: feature:11684-11754:1:region

position:11684:1
position: 11684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11754:1
position: 11754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11684-11754:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 345164
product: tRNA-Ser
codon recognized: AGY
so part of: sequence
location: 11755..11820
location: region:11755-11820:1
so has part: feature:11755-11820:1:region

position:11755:1
position: 11755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11820:1
position: 11820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11755-11820:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 345164
product: tRNA-Leu
codon recognized: CUN
so part of: sequence
location: 11820..11890
location: region:11820-11890:1
so has part: feature:11820-11890:1:region

position:11890:1
position: 11890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11820-11890:1:region

ND5
type: Gene
subclass of: SO_0000704
RO_0002162: 345164
gene: ND5
so part of: sequence
location: 11891..13708
location: region:11891-13708:1
so has part: feature:11891-13708:1:exon
subclass of: SO_0000010

23808607
type: Gene
SIO_000068: ncbigene

position:11891:1
position: 11891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13708:1
position: 13708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11891-13708:1:exon

ND5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 345164
gene: ND5
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 5
translation: MGTTMLLSTSMILTLTLILTPMILPLLTKTLKNSPTTITHATKTAFLTSLVPMVIFMYSNTESITTCWEWKFTANFKIPISLKMDQYSIMFLPIALFVTWSILQFATWYMASEPSITKFFSYLSTFLVAMLTLTLANNMFLLFVGWEGVGIMSFLLIGWWHGRAKANTAALQAVLYNRIGDIGLIISMAWMASTLNTWEIQQTFFHTHTPMLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPMLSSNQTALTTCLCLGALSTLFAATCALTQNDIKKIIAFSTSSQLGLMMVAIGLNLPQLAFLHISTHAFFKAMLFLCSGSIIHNLAGEQDIRKMGGLQKTLPTTTSCLTIGNLALMGTPFLAGFYSKDLIIENLNTSYLNTWALTMTLLATSFTATYSLRMTSLVQTGFTRISPTTPINENNPLITNPILRLALGTILSGLLITSYIIPTKTPPMTMPTVTKTAAILVTILGIILALELSNMTHTLTHPKQNIYSNFSINLGYFNLLTHRLSTTSLLNHGQKFALHLTDLFWYKKMGPEGLADLQQMATKTSTTLHTGLIKTYLGSFALSILTILLALK
SIO_010081: ND5
subclass of: SO_0000673
so part of: ND5
location: 11891..13708
location: region:11891-13708:1
so has part: feature:11891-13708:1:exon

YP_009128617.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11891-13708:1:exon

CYTB
type: Gene
subclass of: SO_0000704
RO_0002162: 345164
gene: CYTB
so part of: sequence
location: 13714..14856
location: region:13714-14856:1
so has part: feature:13714-14856:1:exon
subclass of: SO_0000010

23808608
type: Gene
SIO_000068: ncbigene

position:13714:1
position: 13714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14856:1
position: 14856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13714-14856:1:exon

CYTB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 345164
gene: CYTB
codon start: 1
transl table: 2
product: cytochrome b
translation: MAPNIRKSHPLMKMINNSLIDLPTPPNISMWWNFGSLLGICLATQILTGLLLAMHYTADTTLAFSSVAHTCRNVQYGWLIRNLHANGASLFFICIYMHIGRGIYYGSYLYKETWNTGIILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFLITGLTLIHLTFLHESGSNNPLGITSNCDKIPFHPYYSLKDILGFMLMYLPLMTLALFTPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASVLILFLSPLLHKSKQRTMTFRPLSQSLFWLLVTNLLILTWVGSQPVEHPFIIIGQLASLSYFTTLLILLPLTGALENKILNY
SIO_010081: CYTB
subclass of: SO_0000673
so part of: CYTB
location: 13714..14856
location: region:13714-14856:1
so has part: feature:13714-14856:1:exon

YP_009128618.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13714-14856:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 345164
product: tRNA-Thr
so part of: sequence
location: 14859..14927
location: region:14859-14927:1
so has part: feature:14859-14927:1:region

position:14859:1
position: 14859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14927:1
position: 14927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14859-14927:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 345164
note: control region
so part of: sequence
location: 14928..16447
location: region:14928-16447:1
so has part: feature:14928-16447:1:region

position:14928:1
position: 14928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16447:1
position: 16447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14928-16447:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 345164
product: tRNA-Pro
so part of: sequence
location: complement(16447..16517)
location: region:16447-16517:-1
so has part: feature:16447-16517:-1:region

position:16447:-1
position: 16447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16517:-1
position: 16517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16447-16517:-1:region

ND6
type: Gene
subclass of: SO_0000704
RO_0002162: 345164
gene: ND6
so part of: sequence
location: complement(16532..17059)
location: region:16532-17059:-1
so has part: feature:16532-17059:-1:exon
subclass of: SO_0000010

23808609
type: Gene
SIO_000068: ncbigene

position:16532:-1
position: 16532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17059:-1
position: 17059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16532-17059:-1:exon

ND6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 345164
gene: ND6
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 6
translation: MVMTYFVFFLGVCFVFGALAVASNPSPYYGVVGLVLGSVVGCGWLMSLGVSFISLVLFMVYLGGMLVVFVYSVALAADPFPEAWGNWRVVGCGVGLILLLFVGVVIGGGVGCLSLGVSTVDSGGVVSVRLDFSGVAMFYFCGVGMFFVAGWGLLLTLFVVLELVRGLSRGAIRAV
SIO_010081: ND6
subclass of: SO_0000673
so part of: ND6
location: complement(16532..17059)
location: region:16532-17059:-1
so has part: feature:16532-17059:-1:exon

YP_009128619.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16532-17059:-1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 345164
product: tRNA-Glu
so part of: sequence
location: complement(17057..17127)
location: region:17057-17127:-1
so has part: feature:17057-17127:-1:region

position:17057:-1
position: 17057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17127:-1
position: 17127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17057-17127:-1:region