Falco biarmicus isolate bFalBia1 chromosome 21, bFalBia1.pri, whole genome shotgun sequence.
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Falconiformes; Falconidae; Falco.
REFSEQ INFORMATION: The reference sequence is identical to\nCM042625.1.\nAssembly name: bFalBia1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2022/06/02. The original whole-genome shotgun project has the\naccession JAMOAT000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 14-DEC-2021\nAssembly Method :: Hifiasm v. 0.13.0; purge_dups v. 1.2.3;\n bionano solve v. 3.6.1; salsa2 v. 2.2;\n gEVAL v. 2021-07-07; VGP pipeline v. 2.0\nAssembly Name :: bFalBia1.pri\nDiploid :: Principal Pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 28x\nSequencing Technology :: PacBio Sequel II HiFi; Arima Genomics\n Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Full annotation\nAnnotation Name :: GCF_023638135.1-RS_2023_05\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Gnomon; cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 05/22/2023\n##Genome-Annotation-Data-END##
Farooq Omar Al-Ajli, Souq Waqif Falcon Hospital
vigilin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC130141818; Derived by automated computational analysis using gene prediction method: Gnomon.
COORDINATES: polyA evidence [ECO:0006239]
endoplasmic reticulum-Golgi intermediate compartment protein 3-like; Derived by automated computational analysis using gene prediction method: Gnomon.
endoplasmic reticulum-Golgi intermediate compartment protein 3-like, transcript variant X2
endoplasmic reticulum-Golgi intermediate compartment protein 3-like, transcript variant X3
endoplasmic reticulum-Golgi intermediate compartment protein 3-like, transcript variant X4
endoplasmic reticulum-Golgi intermediate compartment protein 3-like, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon.
endoplasmic reticulum-Golgi intermediate compartment protein 3-like, transcript variant X6
endoplasmic reticulum-Golgi intermediate compartment protein 3-like, transcript variant X1
endoplasmic reticulum-Golgi intermediate compartment protein 3-like isoform X2
endoplasmic reticulum-Golgi intermediate compartment protein 3-like isoform X3
endoplasmic reticulum-Golgi intermediate compartment protein 3-like isoform X1
endoplasmic reticulum-Golgi intermediate compartment protein 3-like isoform X4
endoplasmic reticulum-Golgi intermediate compartment protein 3-like isoform X5
LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated; Derived by automated computational analysis using gene prediction method: Gnomon.
LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 3 codons
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: U6 snRNA-associated Sm-like protein LSm2
uncharacterized LOC130141813; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger protein 345-like; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC130141814; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC130141814, transcript variant X2
uncharacterized LOC130141814, transcript variant X1
zinc finger protein 501-like; Derived by automated computational analysis using gene prediction method: Gnomon.
transfer RNA leucine (anticodon AAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
zinc finger protein OZF-like; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger protein OZF-like, transcript variant X1
zinc finger protein OZF-like, transcript variant X2
zinc finger protein 883-like; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger protein 883-like, transcript variant X2
zinc finger protein 883-like, transcript variant X1
zinc finger protein 883-like, transcript variant X4
zinc finger protein 883-like, transcript variant X3
E3 ubiquitin-protein ligase TRIM7-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
tripartite motif-containing protein 10-like; Derived by automated computational analysis using gene prediction method: Gnomon.
tripartite motif-containing protein 10-like, transcript variant X3
tripartite motif-containing protein 10-like, transcript variant X2
tripartite motif-containing protein 10-like, transcript variant X4
tripartite motif-containing protein 10-like, transcript variant X12
tripartite motif-containing protein 10-like, transcript variant X1
tripartite motif-containing protein 10-like, transcript variant X16
tripartite motif-containing protein 10-like, transcript variant X13
tripartite motif-containing protein 10-like, transcript variant X7
tripartite motif-containing protein 10-like, transcript variant X6
tripartite motif-containing protein 10-like, transcript variant X11
tripartite motif-containing protein 10-like, transcript variant X14
tripartite motif-containing protein 10-like, transcript variant X8
tripartite motif-containing protein 10-like, transcript variant X15
tripartite motif-containing protein 10-like, transcript variant X10
tripartite motif-containing protein 10-like, transcript variant X9
tripartite motif-containing protein 10-like, transcript variant X21
tripartite motif-containing protein 10-like, transcript variant X5
tripartite motif-containing protein 10-like, transcript variant X17
tripartite motif-containing protein 10-like, transcript variant X22
tripartite motif-containing protein 10-like, transcript variant X18
tripartite motif-containing protein 10-like, transcript variant X19
tripartite motif-containing protein 10-like, transcript variant X20
tripartite motif-containing protein 10-like isoform X13
tripartite motif-containing protein 10-like isoform X10
tripartite motif-containing protein 10-like isoform X4
tripartite motif-containing protein 10-like isoform X2
tripartite motif-containing protein 10-like isoform X3
tripartite motif-containing protein 10-like isoform X8
tripartite motif-containing protein 10-like isoform X9
tripartite motif-containing protein 10-like isoform X11
E3 ubiquitin-protein ligase TRIM15-like isoform X5
tripartite motif-containing protein 10-like isoform X12
E3 ubiquitin-protein ligase TRIM15-like isoform X7
tripartite motif-containing protein 10-like isoform X6
tripartite motif-containing protein 10-like isoform X1
tripartite motif-containing protein 10-like isoform X15
tripartite motif-containing protein 10-like isoform X14
receptor for activated C kinase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
receptor of activated protein C kinase 1
tripartite motif containing 41; Derived by automated computational analysis using gene prediction method: Gnomon.
E3 ubiquitin-protein ligase TRIM7-like, transcript variant X1
transfer RNA lysine (anticodon CUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
E3 ubiquitin-protein ligase TRIM7-like, transcript variant X2
E3 ubiquitin-protein ligase TRIM7-like isoform X1
E3 ubiquitin-protein ligase TRIM7-like isoform X2
uncharacterized LOC130141815; Derived by automated computational analysis using gene prediction method: Gnomon.
E3 ubiquitin-protein ligase TRIM39-like; Derived by automated computational analysis using gene prediction method: Gnomon.
E3 ubiquitin-protein ligase TRIM39-like, transcript variant X2
E3 ubiquitin-protein ligase TRIM39-like, transcript variant X1
E3 ubiquitin-protein ligase TRIM39-like isoform X2
zinc finger protein RFP-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM39-like
transfer RNA glutamic acid (anticodon CUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA leucine (anticodon CAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA glutamic acid (anticodon UUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA valine (anticodon AAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
uncharacterized LOC130141816; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC130141816, transcript variant X1
uncharacterized LOC130141816, transcript variant X2
transfer RNA threonine (anticodon UGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA proline (anticodon UGG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA asparagine (anticodon GUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
interleukin 4 induced 1; Derived by automated computational analysis using gene prediction method: Gnomon.
interleukin 4 induced 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
interleukin 4 induced 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
zinc finger protein CKR1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger protein CKR1-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
zinc finger protein CKR1-like, transcript variant X2
zinc finger protein CKR1-like, transcript variant X3
zinc finger protein CKR1-like isoform X1
zinc finger protein CKR1-like isoform X2
zinc finger protein 436-like; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger protein 436-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins
zinc finger protein 436-like, transcript variant X2
zinc finger protein 436-like, transcript variant X4
zinc finger protein 436-like, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
zinc finger protein 436-like, transcript variant X3
zinc finger protein 692-like; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger protein 692-like, transcript variant X2
zinc finger protein 692-like, transcript variant X1
C-type lectin domain family 2 member G-like; Derived by automated computational analysis using gene prediction method: Gnomon.
C-type lectin domain family 2 member G-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
C-type lectin domain family 2 member G-like, transcript variant X4
C-type lectin domain family 2 member G-like, transcript variant X2
C-type lectin domain family 2 member G-like, transcript variant X1
C-type lectin domain family 2 member G-like, transcript variant X5
C-type lectin domain family 2 member G-like isoform X2
C-type lectin domain family 2 member G-like isoform X3
C-type lectin domain family 2 member D-like isoform X1
C-type lectin domain family 2 member D-like; Derived by automated computational analysis using gene prediction method: Gnomon.
C-type lectin domain family 2 member D-like, transcript variant X4
C-type lectin domain family 2 member D-like, transcript variant X2
C-type lectin domain family 2 member D-like, transcript variant X3
C-type lectin domain family 2 member D-like, transcript variant X1
C-type lectin domain family 2 member D-like, transcript variant X5
C-type lectin domain family 2 member D-like, transcript variant X6
C-type lectin domain family 2 member D-like isoform X2
C-type lectin domain family 2 member B-like; Derived by automated computational analysis using gene prediction method: Gnomon.
C-type lectin domain family 2 member B-like, transcript variant X2
C-type lectin domain family 2 member B-like, transcript variant X3
C-type lectin domain family 2 member B-like, transcript variant X1
C-type lectin domain family 2 member B-like isoform X2
killer cell lectin-like receptor subfamily B member 1B allele A isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
C-type lectin domain family 2 member B-like isoform X3
C-type lectin domain family 2 member B-like isoform X1
butyrophilin subfamily 1 member A1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
butyrophilin subfamily 1 member A1-like, transcript variant X7
butyrophilin subfamily 1 member A1-like, transcript variant X2
butyrophilin subfamily 1 member A1-like, transcript variant X5
butyrophilin subfamily 1 member A1-like, transcript variant X3
butyrophilin subfamily 1 member A1-like, transcript variant X8
butyrophilin subfamily 1 member A1-like, transcript variant X4
butyrophilin subfamily 1 member A1-like, transcript variant X6
butyrophilin subfamily 1 member A1-like, transcript variant X1
butyrophilin subfamily 1 member A1-like, transcript variant X9
zinc finger protein RFP-like, transcript variant X2
zinc finger protein RFP-like, transcript variant X3
zinc finger protein RFP-like, transcript variant X1
E3 ubiquitin-protein ligase TRIM11-like isoform X2
alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase; Derived by automated computational analysis using gene prediction method: Gnomon.
alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, transcript variant X1
alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, transcript variant X2
alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, transcript variant X4
alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, transcript variant X3
alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, transcript variant X5
alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase
alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, transcript variant X6
RNA polymerase I subunit H; Derived by automated computational analysis using gene prediction method: Gnomon.
RNA polymerase I subunit H, transcript variant X1
RNA polymerase I subunit H, transcript variant X2
DNA-directed RNA polymerase I subunit RPA12
protein phosphatase 1 regulatory inhibitor subunit 11; Derived by automated computational analysis using gene prediction method: Gnomon.
protein phosphatase 1 regulatory inhibitor subunit 11
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 54 Proteins
ribonuclease P/MRP subunit p21; Derived by automated computational analysis using gene prediction method: Gnomon.
ribonuclease P/MRP subunit p21, transcript variant X1
ribonuclease P/MRP subunit p21, transcript variant X2
ribonuclease P protein subunit p21 isoform X1
ribonuclease P protein subunit p21 isoform X2
G protein nucleolar 1 (putative); Derived by automated computational analysis using gene prediction method: Gnomon.
guanine nucleotide-binding protein-like 1
ATP binding cassette subfamily F member 1; Derived by automated computational analysis using gene prediction method: Gnomon.
ATP binding cassette subfamily F member 1
ATP-binding cassette sub-family F member 1