Sodalis glossinidius str. 'morsitans', complete sequence.
type: Entry
definition: Sodalis glossinidius str. 'morsitans', complete sequence.
sequence version: NC_007712.1
sequence date: 2023-04-17
sequence: sequence
division: CON
label: NC_007712.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMD00061079
keyword: RefSeq
source: Sodalis glossinidius str. 'morsitans'
organism: Sodalis glossinidius str. 'morsitans'
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Bruguierivoracaceae; Sodalis.
reference: 1
references: 16365377
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nAP008232.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/17/2023 01:23:04\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,017\nCDSs (total) :: 4,918\nGenes (coding) :: 3,718\nCDSs (with protein) :: 3,718\nGenes (RNA) :: 99\nrRNAs :: 8, 7, 7 (5S, 16S, 23S)\ncomplete rRNAs :: 8, 7, 7 (5S, 16S, 23S)\ntRNAs :: 71\nncRNAs :: 6\nPseudo Genes (total) :: 1,200\nCDSs (without protein) :: 1,200\nPseudo Genes (ambiguous residues) :: 0 of 1,200\nPseudo Genes (frameshifted) :: 890 of 1,200\nPseudo Genes (incomplete) :: 445 of 1,200\nPseudo Genes (internal stop) :: 423 of 1,200\nPseudo Genes (multiple problems) :: 498 of 1,200\nPseudo Genes (short protein) :: 1 of 1,200\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000340
sequence length: 4171146
topology: circular
so has quality: SO_0000988
location: 1..4171146
location: region:1-4171146:1
RO_0002162: 343509

NC_007712
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMD00061079
type: BioSample
SIO_000068: biosample

1
title: Massive genome erosion and functional adaptations provide insights into the symbiotic lifestyle of Sodalis glossinidius in the tsetse host
author: Toh, H.
author: Weiss, B.L.
author: Perkin, S.A.
author: Yamashita, A.
author: Oshima, K.
author: Hattori, M.
author: Aksoy, S.
journal: Genome Res
volume: 16
issue: 2
pages: 149-156
year: 2006
pubmed: 16365377

16365377
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Hattori, M.
author: Yamashita, A.
author: Toh, H.
author: Oshima, K.
author: Shiba, T.
journal: Submitted (14-DEC-2004) Contact:Masahira Hattori Graduate School of Frontier Sciences, University of Tokyo; 5-1-5 Kashiwanoha, Kashiwa, Chiba 277-8561, Japan

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4171146:1
position: 4171146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-4171146:1:source
so part of: sequence
organism: Sodalis glossinidius str. 'morsitans'
mol type: genomic DNA
strain: morsitans
isolation source: isolated from secondary symbiont of Glossina morsitans morsitans
host: Glossina morsitans morsitans

343509
type: Taxonomy
SIO_000068: taxonomy

SGP1_RS00005
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: dnaA
locus tag: SGP1_RS00005
old locus tag: SG0001
so part of: sequence
location: 1..1395
location: region:1-1395:1
so has part: feature:1-1395:1:exon
subclass of: SO_0000010

position:1395:1
position: 1395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-1395:1:exon

SGP1_RS00005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: dnaA
locus tag: SGP1_RS00005
old locus tag: SG0001
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005229578.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO process: GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chromosomal replication initiator protein DnaA
translation: MSLSLWQQCLARLQDELPATEFSMWIRPLQAELSDNTLALYAPNRFVLDWVRDKYLNNINGLLNDFCGTDAPLLRFEVGSKPPQMAVLQPASQHASEAPSQAAVARPRPSRPSWDNAPVQPELSYRSNVNPKHNFDNFVEGKSNQLARAAARQVADNPGGAYNPLFLYGGTGLGKTHLLHAVGNGIMARKANAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALLIDDIQFFANKERSQEEFFHTFNALLEGNQQIILTSDRYPKEINGVEDRLKSRFGWGLTVAIEPPELETRVAILMKKADENAIRLPGEVAFFIAKRLRSNVRELEGALNRVIANANFTGRAITIDFVREALRDLLALQEKLVTIDNIQKTVAEYYKIKVADLLSKRRSRSVARPRQMAMALSKELTNHSLPEIGDAFGGRDHTTVLHACRKIEQLREESHDIKEDFSNLIRTLSS
SIO_010081: SGP1_RS00005
subclass of: SO_0000673
so part of: SGP1_RS00005
location: 1..1395
location: region:1-1395:1
so has part: feature:1-1395:1:exon

WP_011409866.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-1395:1:exon

SGP1_RS00010
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: dnaN
locus tag: SGP1_RS00010
old locus tag: SG0002
so part of: sequence
location: 1398..2498
location: region:1398-2498:1
so has part: feature:1398-2498:1:exon
subclass of: SO_0000010

position:1398:1
position: 1398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2498:1
position: 2498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1398-2498:1:exon

SGP1_RS00010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: dnaN
locus tag: SGP1_RS00010
old locus tag: SG0002
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1
GO component: GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit beta
translation: MKFIVEREQLLKPLQQVSSPLGGRPTLPILGNLLLQVSEDRLLLTGTDLEMEMVAQVALSAAHEPGATTVPARKFFDICRGLPEGAEIAVTLEGERMLIRSGRSRYSLSTLPASNFPNLDDWQSEVEFTLSQSILKRLIESTQFSMAHQDVRYYLNGMLFETEGEELRTVATDGHRLAVCAMSVGEALPSHSVIVPRKGVMELVRMLDGGENPVKLQIGSNNIRASVGDYIFTSKLVDGRFPDYRRVLPKNPDKTLEAGCDVLKQAFARAAILSNEKFRGVRLYLSANQLKITANNPEQEEAEEILDVTYQGSEMEIGFNVSYVLDVLNALKCEEVRLLLTDGVSSVQIEDSASQAAAYVVMPMRL
SIO_010081: SGP1_RS00010
subclass of: SO_0000673
so part of: SGP1_RS00010
location: 1398..2498
location: region:1398-2498:1
so has part: feature:1398-2498:1:exon

WP_011409867.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1398-2498:1:exon

SGP1_RS00015
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: recF
locus tag: SGP1_RS00015
old locus tag: SG0003
so part of: sequence
location: 2525..3619
location: region:2525-3619:1
so has part: feature:2525-3619:1:exon
subclass of: SO_0000010

position:2525:1
position: 2525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3619:1
position: 3619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2525-3619:1:exon

SGP1_RS00015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: recF
locus tag: SGP1_RS00015
old locus tag: SG0003
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011409868.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA replication/repair protein RecF
translation: MALSRLMIRDFRNISVADLSLAADFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQSGRVIRHEQPEFVLHGRIEAGNVDARATSVGLSRNRLGDSTVRIDGSDGHKVAELAQLLPMQLITPEGFTLLNGGPKYRRAFMDWGCFHNEPAFFTAWSNLRRLLKQRNAALRQVSRYQQLRVWDQELIPLANRISEWRADYSAAIAADITATCAQFLPEFRLDFSFQRGWDKESDFGELLERQFERDRALTYTASGPHKADFRIRAEGVPVEDILSRGQLKLLMCALRLAQGEFLTHRNGRRCLYLIDDFASELDTGRRRLLAERLKATHAQVFVSAVSADQIRDIPDEKGKMFKVEQGKISLQSEV
SIO_010081: SGP1_RS00015
subclass of: SO_0000673
so part of: SGP1_RS00015
location: 2525..3619
location: region:2525-3619:1
so has part: feature:2525-3619:1:exon

WP_011409868.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2525-3619:1:exon

SGP1_RS00020
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: gyrB
locus tag: SGP1_RS00020
old locus tag: SG0004
so part of: sequence
location: 3638..6052
location: region:3638-6052:1
so has part: feature:3638-6052:1:exon
subclass of: SO_0000010

position:3638:1
position: 3638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6052:1
position: 6052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3638-6052:1:exon

SGP1_RS00020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: gyrB
locus tag: SGP1_RS00020
old locus tag: SG0004
EC number: 5.6.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005121480.1
GO component: GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO function: GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA topoisomerase (ATP-hydrolyzing) subunit B
translation: MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEIVVKIHEDNSVSVQDDGRGIPTGIHEEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSEKLELMIKREGKVHQQTYHAGVPQSPLEVVGETDQTGTTVRFWPSFVTFTNNTEFQYEILAKRLRELSFLNSGVSIRLRDKRNDKEDHFHYEGGIKAFVEYLNKNKTPIHPNVFYFSTEKDGIGVEIALQWNDGFQENIYCFTNNIPQRDGGAHLAGFRAAMTRTLNSYMDKEGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVESLMNERLVEYLLENPNDAKIVVGKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQERDPALSELYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGRDEYNPDKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPEIIELGHVFIAQPPLYKVKKGKQEQYIKDDEAMDQYQIALAMDGATLHANAHAPALAGEPLENLVAEHYAVQKMIGRMERRFPRVLLNHLIYQPALTEVQLSKQDQVTSWIASLVQALNDNEKHGSSYSYKVQENRERQLFEPLLRVRTHGVDTDYLLDYDFIHGGEYRKLATLGETLGDLIEADAYIERGERRQPVTSFEQALEWLVKESRRGLAVQRYKGLGEMNPEQLWETTMDPDSRRMLRVTVKDAIAADQLFTTLMGDAVEPRRAFIEENALKAANIDI
SIO_010081: SGP1_RS00020
subclass of: SO_0000673
so part of: SGP1_RS00020
location: 3638..6052
location: region:3638-6052:1
so has part: feature:3638-6052:1:exon

WP_011409869.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3638-6052:1:exon

SGP1_RS00025
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: yidA
locus tag: SGP1_RS00025
pseudo: true
so part of: sequence
location: 6433..7212
location: region:6433-7212:1
so has part: feature:6433-7212:1:exon
subclass of: SO_0000010

position:6433:1
position: 6433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7212:1
position: 7212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6433-7212:1:exon

SGP1_RS00025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: yidA
locus tag: SGP1_RS00025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012004510.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: sugar-phosphatase
SIO_010081: SGP1_RS00025
subclass of: SO_0000673
so part of: SGP1_RS00025
location: 6433..7212
location: region:6433-7212:1
so has part: feature:6433-7212:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6433-7212:1:exon

SGP1_RS00030
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00030
old locus tag: SG0005
pseudo: true
so part of: sequence
location: 7385..8088
location: region:7385-8088:1
so has part: feature:7385-8088:1:exon
subclass of: SO_0000010

position:7385:1
position: 7385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8088:1
position: 8088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7385-8088:1:exon

SGP1_RS00030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00030
old locus tag: SG0005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005976717.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: FadR/GntR family transcriptional regulator
SIO_010081: SGP1_RS00030
subclass of: SO_0000673
so part of: SGP1_RS00030
location: 7385..8088
location: region:7385-8088:1
so has part: feature:7385-8088:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7385-8088:1:exon

SGP1_RS00035
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00035
pseudo: true
so part of: sequence
location: 8085..8973
location: region:8085-8973:1
so has part: feature:8085-8973:1:exon
subclass of: SO_0000010

position:8085:1
position: 8085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8973:1
position: 8973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8085-8973:1:exon

SGP1_RS00035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00035
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014917107.1
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: 2-dehydro-3-deoxygalactonokinase
SIO_010081: SGP1_RS00035
subclass of: SO_0000673
so part of: SGP1_RS00035
location: 8085..8973
location: region:8085-8973:1
so has part: feature:8085-8973:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8085-8973:1:exon

SGP1_RS00040
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00040
pseudo: true
so part of: sequence
location: 8960..9570
location: region:8960-9570:1
so has part: feature:8960-9570:1:exon
subclass of: SO_0000010

position:8960:1
position: 8960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9570:1
position: 9570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8960-9570:1:exon

SGP1_RS00040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013575996.1
GO function: GO:0008674 - 2-dehydro-3-deoxy-6-phosphogalactonate aldolase activity [Evidence IEA]
GO process: GO:0034194 - D-galactonate catabolic process [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: 2-dehydro-3-deoxy-6-phosphogalactonate aldolase
SIO_010081: SGP1_RS00040
subclass of: SO_0000673
so part of: SGP1_RS00040
location: 8960..9570
location: region:8960-9570:1
so has part: feature:8960-9570:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8960-9570:1:exon

SGP1_RS00045
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00045
so part of: sequence
location: 9726..10160
location: region:9726-10160:1
so has part: feature:9726-10160:1:exon
subclass of: SO_0000010

position:9726:1
position: 9726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10160:1
position: 10160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9726-10160:1:exon

SGP1_RS00045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00045
inference: COORDINATES: protein motif:HMM:TIGR01784.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rpn family recombination-promoting nuclease/putative transposase
translation: MMQLLPQPISLFNFIAANINDARHFLDGFLPAPIRRCCDLTTLSLQASHIIDDALRGQFSDLLFSLSTVRGKGYIHCVQDLQSRPEKMMPLRMYRYSLTIMQRHIEQGNSKFPVVLPLLFYHGRTPANAYKYAFTRFLFASRSR
SIO_010081: SGP1_RS00045
subclass of: SO_0000673
so part of: SGP1_RS00045
location: 9726..10160
location: region:9726-10160:1
so has part: feature:9726-10160:1:exon

WP_050747263.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9726-10160:1:exon

SGP1_RS22765
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS22765
so part of: sequence
location: 10186..10413
location: region:10186-10413:1
so has part: feature:10186-10413:1:exon
subclass of: SO_0000010

position:10186:1
position: 10186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10413:1
position: 10413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10186-10413:1:exon

SGP1_RS22765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS22765
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVDIRAMTIHEVLPSSRRDELFALLDKHAHGNDPQALDDDINRVLSQWSLPPAHFCKIIHNLVDLFRAGNGRQDF
SIO_010081: SGP1_RS22765
subclass of: SO_0000673
so part of: SGP1_RS22765
location: 10186..10413
location: region:10186-10413:1
so has part: feature:10186-10413:1:exon

WP_148203304.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10186-10413:1:exon

SGP1_RS00050
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00050
old locus tag: SG0006
so part of: sequence
location: complement(10538..11662)
location: region:10538-11662:-1
so has part: feature:10538-11662:-1:exon
subclass of: SO_0000010

position:10538:-1
position: 10538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11662:-1
position: 11662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10538-11662:-1:exon

SGP1_RS00050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00050
old locus tag: SG0006
inference: COORDINATES: protein motif:HMM:NF018244.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IpaD/SipD/SspD family type III secretion system needle tip protein
translation: MVDTICRTHSHIIHMTFSHADSLQSEVVKKELFQENVNDNCLDLIDQLGQLSSKHSDLYRLKAGIKTFKQLMAGEPGSRVQDILKKIELLSPSLTRIDSSEPDSIESLKRRQKESAKAASELSEALQGEIRKESFIRQKNYNTLNHIIEEVKQEPNLEEAYNIYLKDETQLTYSEFWASIAATIASIKTNYVDFYSSLMLQYADFYQAYTELQSKAAGAVSEGKDGNYIKWDNDVMDSAFKEFENKIASLNNNLGTVPQWDQLSDTEHQQMADTLKPAFAVDMETGKITFDQSALSACPKSPSGGSGSGKSDVDMASYNAWLAAFNSMGNTFQSNMQSFAQRYTQANSTFDNLNKVLSSSITALLECAKAFLSN
SIO_010081: SGP1_RS00050
subclass of: SO_0000673
so part of: SGP1_RS00050
location: complement(10538..11662)
location: region:10538-11662:-1
so has part: feature:10538-11662:-1:exon

WP_083764616.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10538-11662:-1:exon

SGP1_RS00055
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00055
pseudo: true
so part of: sequence
location: 12418..>12797
location: region:12418-12797:1
so has part: feature:12418-12797:1:exon
subclass of: SO_0000010

position:12418:1
position: 12418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12797:1
position: 12797
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12418-12797:1:exon

SGP1_RS00055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00055
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020077623.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: D-galactonate dehydratase
SIO_010081: SGP1_RS00055
subclass of: SO_0000673
so part of: SGP1_RS00055
location: 12418..>12797
location: region:12418-12797:1
so has part: feature:12418-12797:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12418-12797:1:exon

SGP1_RS00060
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00060
pseudo: true
so part of: sequence
location: 12954..13785
location: region:12954-13785:1
so has part: feature:12954-13785:1:exon
subclass of: SO_0000010

position:12954:1
position: 12954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13785:1
position: 13785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12954-13785:1:exon

SGP1_RS00060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00060
inference: COORDINATES: protein motif:HMM:NF013752.2
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5 family transposase
SIO_010081: SGP1_RS00060
subclass of: SO_0000673
so part of: SGP1_RS00060
location: 12954..13785
location: region:12954-13785:1
so has part: feature:12954-13785:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12954-13785:1:exon

SGP1_RS00070
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: dgoD
locus tag: SGP1_RS00070
pseudo: true
so part of: sequence
location: <14067..>14762
location: region:14067-14762:1
so has part: feature:14067-14762:1:exon
subclass of: SO_0000010

position:14067:1
position: 14067
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:14762:1
position: 14762
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14067-14762:1:exon

SGP1_RS00070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: dgoD
locus tag: SGP1_RS00070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020077623.1
GO function: GO:0008869 - galactonate dehydratase activity [Evidence IEA]
GO process: GO:0009063 - amino acid catabolic process [Evidence IEA]
note: internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: galactonate dehydratase
SIO_010081: SGP1_RS00070
subclass of: SO_0000673
so part of: SGP1_RS00070
location: <14067..>14762
location: region:14067-14762:1
so has part: feature:14067-14762:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14067-14762:1:exon

SGP1_RS32240
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS32240
so part of: sequence
location: 15037..15336
location: region:15037-15336:1
so has part: feature:15037-15336:1:exon
subclass of: SO_0000010

position:15037:1
position: 15037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15336:1
position: 15336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15037-15336:1:exon

SGP1_RS32240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS32240
inference: COORDINATES: protein motif:HMM:NF019310.2
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MGSKLIYFIAIFGWSVATLAQGFASGLGSLLGLRALTGLFEAPAFPTNNRMVTSWFPERERASAVGLLTSGQFVSGVPDAASDLDTGSIELALGLYPDR
SIO_010081: SGP1_RS32240
subclass of: SO_0000673
so part of: SGP1_RS32240
location: 15037..15336
location: region:15037-15336:1
so has part: feature:15037-15336:1:exon

WP_243466132.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15037-15336:1:exon

SGP1_RS32245
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS32245
so part of: sequence
location: 15445..16062
location: region:15445-16062:1
so has part: feature:15445-16062:1:exon
subclass of: SO_0000010

position:15445:1
position: 15445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16062:1
position: 16062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15445-16062:1:exon

SGP1_RS32245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS32245
inference: COORDINATES: protein motif:HMM:NF019310.2
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MDGDAPVEKKNRVRMSGSDWKLVFNRKLVGVYLGQFSVTSTLWFFLTWFPNYLTQEKHIAALTAGFMTTVPFLAAFFGVILSGYFADRMVRAGKSLGFARKTPIICGLLLSTCIMGANYTNDPLWIMVLMALAYSISLAVWAASPYRWWWAGLWLCAGADLHRHGGVFGRAFLSSAGWGSETRRGSLSESGTRTICLRRWVLVAS
SIO_010081: SGP1_RS32245
subclass of: SO_0000673
so part of: SGP1_RS32245
location: 15445..16062
location: region:15445-16062:1
so has part: feature:15445-16062:1:exon

WP_243466133.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15445-16062:1:exon

SGP1_RS32250
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS32250
so part of: sequence
location: complement(16055..16267)
location: region:16055-16267:-1
so has part: feature:16055-16267:-1:exon
subclass of: SO_0000010

position:16055:-1
position: 16055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16267:-1
position: 16267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16055-16267:-1:exon

SGP1_RS32250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS32250
inference: COORDINATES: protein motif:HMM:NF024206.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ankyrin repeat domain-containing protein
translation: MAAVENGHRAIVRQLLRRRETASDLIDWAGLGAIDYAVRSGHYTIAGLIRQRGALGGVTQLWAISYFLLN
SIO_010081: SGP1_RS32250
subclass of: SO_0000673
so part of: SGP1_RS32250
location: complement(16055..16267)
location: region:16055-16267:-1
so has part: feature:16055-16267:-1:exon

WP_041866471.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16055-16267:-1:exon

SGP1_RS32255
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS32255
so part of: sequence
location: complement(16369..16605)
location: region:16369-16605:-1
so has part: feature:16369-16605:-1:exon
subclass of: SO_0000010

position:16369:-1
position: 16369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16605:-1
position: 16605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16369-16605:-1:exon

SGP1_RS32255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS32255
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTLRLRVLLQHTAIVIAAPNMRGYTLLQQAVINGQCRMVHVLLAHPRMPVAQRDAAAFGGNAWPCRDHQDTADAHLAG
SIO_010081: SGP1_RS32255
subclass of: SO_0000673
so part of: SGP1_RS32255
location: complement(16369..16605)
location: region:16369-16605:-1
so has part: feature:16369-16605:-1:exon

WP_041866472.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16369-16605:-1:exon

SGP1_RS00090
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00090
so part of: sequence
location: complement(16602..17009)
location: region:16602-17009:-1
so has part: feature:16602-17009:-1:exon
subclass of: SO_0000010

position:16602:-1
position: 16602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17009:-1
position: 17009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16602-17009:-1:exon

SGP1_RS00090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00090
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
GO function: GO:0005515 - protein binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: ankyrin repeat domain-containing protein
translation: MLMYNGEDDLLATLLRMPGANICARLPGMTGDGLLLELLNCLPSLSNSVLALLTHPHLEANTPDRKNETPLMKVIRHGHLPLAQALLARPDLRLADATDNEGRTLLIQMASKGDSAWVTAILCRFDCAISAGGQS
SIO_010081: SGP1_RS00090
subclass of: SO_0000673
so part of: SGP1_RS00090
location: complement(16602..17009)
location: region:16602-17009:-1
so has part: feature:16602-17009:-1:exon

WP_148203306.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16602-17009:-1:exon

SGP1_RS28815
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS28815
so part of: sequence
location: complement(16996..17295)
location: region:16996-17295:-1
so has part: feature:16996-17295:-1:exon
subclass of: SO_0000010

position:16996:-1
position: 16996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17295:-1
position: 17295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16996-17295:-1:exon

SGP1_RS28815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS28815
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDTASVVSGRFGAEGTAMSDAAAPSAPLPLAADLRGCANSPASSFPLMALPPELLSLTFAKLDLGNLHAVSQAHPRLQEPARRACQNYRHPASGHRADV
SIO_010081: SGP1_RS28815
subclass of: SO_0000673
so part of: SGP1_RS28815
location: complement(16996..17295)
location: region:16996-17295:-1
so has part: feature:16996-17295:-1:exon

WP_148203307.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16996-17295:-1:exon

SGP1_RS26060
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS26060
pseudo: true
so part of: sequence
location: complement(17468..17789)
location: region:17468-17789:-1
so has part: feature:17468-17789:-1:exon
subclass of: SO_0000010

position:17468:-1
position: 17468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17789:-1
position: 17789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17468-17789:-1:exon

SGP1_RS26060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS26060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015344010.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: YceK/YidQ family lipoprotein
SIO_010081: SGP1_RS26060
subclass of: SO_0000673
so part of: SGP1_RS26060
location: complement(17468..17789)
location: region:17468-17789:-1
so has part: feature:17468-17789:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17468-17789:-1:exon

SGP1_RS00100
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: ibpA
locus tag: SGP1_RS00100
old locus tag: SG0008
so part of: sequence
location: 18087..18500
location: region:18087-18500:1
so has part: feature:18087-18500:1:exon
subclass of: SO_0000010

position:18087:1
position: 18087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18500:1
position: 18500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18087-18500:1:exon

SGP1_RS00100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: ibpA
locus tag: SGP1_RS00100
old locus tag: SG0008
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005976748.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: small heat shock chaperone IbpA
translation: MRNFDFSPLYRSAIGFDRLVNLLESGQSQGNGGYPPYNVELVSENQYRIAIAVAGFAESELEITAHDNLLTVKGAHASDQSECNYLYQGIAERDFERKFQLAEHIQIKGAQLANGLLFIDLERVVPDTLKPRRIEIK
SIO_010081: SGP1_RS00100
subclass of: SO_0000673
so part of: SGP1_RS00100
location: 18087..18500
location: region:18087-18500:1
so has part: feature:18087-18500:1:exon

WP_011409873.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18087-18500:1:exon

SGP1_RS00105
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00105
so part of: sequence
location: 18645..19061
location: region:18645-19061:1
so has part: feature:18645-19061:1:exon
subclass of: SO_0000010

position:18645:1
position: 18645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19061:1
position: 19061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18645-19061:1:exon

SGP1_RS00105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00105
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013975536.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Hsp20 family protein
translation: MGFDKLASNIQDDHQGISYPPYNIEKSDDNHYRITLALAGFTQQELSIELEGPRLTIKGKPALAEKEVHYLHQGLVCKEFTLSFTLAEHMTVEQADFTHGLLNIDLERHIPESLQPRHIAIGTTAQRPALQDRTLDAE
SIO_010081: SGP1_RS00105
subclass of: SO_0000673
so part of: SGP1_RS00105
location: 18645..19061
location: region:18645-19061:1
so has part: feature:18645-19061:1:exon

WP_243466318.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18645-19061:1:exon

SGP1_RS00110
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00110
old locus tag: SG0009
pseudo: true
so part of: sequence
location: complement(19227..20484)
location: region:19227-20484:-1
so has part: feature:19227-20484:-1:exon
subclass of: SO_0000010

position:19227:-1
position: 19227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20484:-1
position: 20484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19227-20484:-1:exon

SGP1_RS00110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00110
old locus tag: SG0009
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012767818.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: valine--pyruvate transaminase
SIO_010081: SGP1_RS00110
subclass of: SO_0000673
so part of: SGP1_RS00110
location: complement(19227..20484)
location: region:19227-20484:-1
so has part: feature:19227-20484:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19227-20484:-1:exon

SGP1_RS00115
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00115
old locus tag: SG0010
so part of: sequence
location: complement(20622..21623)
location: region:20622-21623:-1
so has part: feature:20622-21623:-1:exon
subclass of: SO_0000010

position:20622:-1
position: 20622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21623:-1
position: 21623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20622-21623:-1:exon

SGP1_RS00115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00115
old locus tag: SG0010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013975680.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AI-2E family transporter
translation: MSVSETWLKATSYLLMFLFITLIIPLHLFPCFIAGFLAYEVIISLTPWFERLVGSGRARWVVVTLIAAFVVIAMTLGIVSLVSFLTSDIQRGIDITAETNRIFSDVKNRIPDYLPSFLPESAEELKDQLFALVESNLIIIRNMGRSFLHGLITIFIGLIIGAVISLNKPSGRNTYFTQQLLERLHYLSQAFRNIVFAQIKVSLVNTLLTSMMILVLFPLFGVHLPLGKTLIVATFIFGLLPIIGNLISNFMIIISALSISLSVGSVMVLYLILIHKLEYFLNAEIVGSRINAKSWELLLAMLIFEAAFGLEGLVAAPIYYAYLKTELRARKLI
SIO_010081: SGP1_RS00115
subclass of: SO_0000673
so part of: SGP1_RS00115
location: complement(20622..21623)
location: region:20622-21623:-1
so has part: feature:20622-21623:-1:exon

WP_011409875.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20622-21623:-1:exon

SGP1_RS31785
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS31785
pseudo: true
so part of: sequence
location: complement(21819..22365)
location: region:21819-22365:-1
so has part: feature:21819-22365:-1:exon
subclass of: SO_0000010

position:21819:-1
position: 21819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22365:-1
position: 22365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21819-22365:-1:exon

SGP1_RS31785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS31785
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005271580.1
GO function: GO:0051287 - NAD binding [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: NAD(P)-dependent oxidoreductase
SIO_010081: SGP1_RS31785
subclass of: SO_0000673
so part of: SGP1_RS31785
location: complement(21819..22365)
location: region:21819-22365:-1
so has part: feature:21819-22365:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21819-22365:-1:exon

SGP1_RS00130
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: glyQ
locus tag: SGP1_RS00130
old locus tag: SG0011
so part of: sequence
location: 22715..23629
location: region:22715-23629:1
so has part: feature:22715-23629:1:exon
subclass of: SO_0000010

position:22715:1
position: 22715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23629:1
position: 23629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22715-23629:1:exon

SGP1_RS00130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: glyQ
locus tag: SGP1_RS00130
old locus tag: SG0011
EC number: 6.1.1.14
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011409876.1
GO component: GO:0009345 - glycine-tRNA ligase complex [Evidence IEA]
GO function: GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycine--tRNA ligase subunit alpha
translation: MQKFDPKTFQGLILTLQDYWARQGCTIVQPLDMEVGAGTSHPMTCLRALGPEPIAAAYVQPSRRSTDGRYGENPNRLQHYYQFQVIIKPSPENIQELYLGSLREVGLDPTIHDIRFVEDNWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLECRPVTGEITYGLERLAMYLQGVDSVYDLVWSDGPLGRTTYGDVFHQNEVEQSTYNFEYADVDFLFTCFEQYEKEAQNLLALEKPLPLPAYERILKAAHSFNLLDARKAISVTERQRYILRIRTLTKAVAEAYYASREALGFPMCKKNEN
SIO_010081: SGP1_RS00130
subclass of: SO_0000673
so part of: SGP1_RS00130
location: 22715..23629
location: region:22715-23629:1
so has part: feature:22715-23629:1:exon

WP_011409876.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22715-23629:1:exon

SGP1_RS00135
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: glyS
locus tag: SGP1_RS00135
old locus tag: SG0012
so part of: sequence
location: 23639..25708
location: region:23639-25708:1
so has part: feature:23639-25708:1:exon
subclass of: SO_0000010

position:23639:1
position: 23639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25708:1
position: 25708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23639-25708:1:exon

SGP1_RS00135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: glyS
locus tag: SGP1_RS00135
old locus tag: SG0012
EC number: 6.1.1.14
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005229381.1
GO component: GO:0009345 - glycine-tRNA ligase complex [Evidence IEA]
GO function: GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycine--tRNA ligase subunit beta
translation: MTQHTFLVEIGTEELPPKALRALAEAFAIHISGELDAANVRHGEVSWFAAPRRLAVKVAALGGAQADSDVEKRGPAIAQVFDADGNPTKAAEGWARGCGITVSQAERLATDKGEWLVYRARVKGQPVQELLCAVVSRALGKLPIPKMMRWGDNETQFIRPVHTVTLLLDDGVIAGNVLGIDADRIVRGHRFMGEREISLEHADQYPQVLLDRGRVMADYLQRKETIRRDAEEAAKRLGGVADLSESLLEEVTSLVEWPVVLTARFEEKFLAVPAEALVYTMKGDQKYFPVYDAAGNLLPHFIFVANIESKDPQQIIAGNEKVVRPRLADAEFFFNTDHKQRLEDRLPRLDTVLFQKQLGTLRDKSDRIEALSAWIAGRIGADVPQAARAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEPEAVALAQKEQYQPRFAGDALPTTLVSCAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRATLGVLRIIVEKQLPLDLQTLTEEAVRLYGEKLTNDAVVNDVIDFMLGRFRAWYQEQGHSVDTIQAVLARRPTRPADFDARVRAVSYFRTLEEAASLAAANKRVSNILAKSDDPVYKDLQASVLKDPSEITLATHLVVLREKLQPLFEAGRYQDALVELAALREPVDAFFDSVMVMADDPQVRINRLTLLAQLRKLFLQVADISLLQ
SIO_010081: SGP1_RS00135
subclass of: SO_0000673
so part of: SGP1_RS00135
location: 23639..25708
location: region:23639-25708:1
so has part: feature:23639-25708:1:exon

WP_011409877.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23639-25708:1:exon

SGP1_RS34825
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS34825
old locus tag: SG0013
so part of: sequence
location: 25899..26282
location: region:25899-26282:1
so has part: feature:25899-26282:1:exon
subclass of: SO_0000010

position:25899:1
position: 25899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26282:1
position: 26282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25899-26282:1:exon

SGP1_RS34825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS34825
old locus tag: SG0013
inference: COORDINATES: protein motif:HMM:NF022699.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3053 family protein
translation: MLGVFQLTGCGDKEPEQRQAFIQFLQNTILPGGERIPTLSVAQKEQFGPYANDYQILQTFSDKFLSSVNGSLVPVLDEISQIRVPQDYLSHRRTLAQARGALNMLAPDLVGPRQETVGRCSRRAQAA
SIO_010081: SGP1_RS34825
subclass of: SO_0000673
so part of: SGP1_RS34825
location: 25899..26282
location: region:25899-26282:1
so has part: feature:25899-26282:1:exon

WP_279379422.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25899-26282:1:exon

SGP1_RS34830
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS34830
so part of: sequence
location: 26227..26487
location: region:26227-26487:1
so has part: feature:26227-26487:1:exon
subclass of: SO_0000010

position:26227:1
position: 26227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26487:1
position: 26487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26227-26487:1:exon

SGP1_RS34830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS34830
inference: COORDINATES: protein motif:HMM:NF022699.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3053 family protein
translation: MARARKQSDDARAALKQPEDLQKVYAQAYDKLVTGPVQKVTPGIGAASSLAEQLVHVGDFLAMQTGQGQPSFDGGAVSFPTQLQVT
SIO_010081: SGP1_RS34830
subclass of: SO_0000673
so part of: SGP1_RS34830
location: 26227..26487
location: region:26227-26487:1
so has part: feature:26227-26487:1:exon

WP_279379423.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26227-26487:1:exon

SGP1_RS00145
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00145
old locus tag: SG0014
so part of: sequence
location: 27270..29195
location: region:27270-29195:1
so has part: feature:27270-29195:1:exon
subclass of: SO_0000010

position:27270:1
position: 27270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29195:1
position: 29195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27270-29195:1:exon

SGP1_RS00145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00145
old locus tag: SG0014
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004718297.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PTS mannitol transporter subunit IICBA
translation: MSSSDIKVIVQNFGRFLSNMVMPNIGAFIAWGIITALFIPTGWTPNATLAKLVGPMITYLLPLLIGYTGGRMVGGERGGVVGAITTMGVIAGADMPMFLGSMIAGPLGGWAIKRFDRAVDGKIKSGFEMLVNNFSAGIIGMLLAVLAFLAVGPLVEMLSKGLAAGVHLMVTYNMLPLTSVFVEPAKILFLNNAINHGIFSPLGIQQATETGKSIFFLIEANPGPGMGVLMAYMIFGRGNAKQSAGGAAIIHFLGGIHEIYFPYVLMNPRLLIAVILGGMTGVFTLNLLGGGLVSPASPGSILAVLAMTPKGTYFANLAAIVAAFAVSFVISSILLKSSRATGDEDNLAEASRRVQDMKAQSKGVAAPVNAGASGDLSSVWKIIVACDAGMGSSAMGAGVLRKKVNEAGLKNISVTNSAINNLPDDVDLVITHRDLTELAMRHAPQAQHISLNNFLDSQLYSDLTARLVAVQKSGDNQQRVMTTLNDSFEDGEQNLFRLTADNVFLGQHADHKEQAIRFAGEQLVKGGYVQPEYVQAMMDREKLTSTYLGESIAVPHGTIEAKDRVLRTGVVFCQYPDGVRFGDEEEDIARLVIGIAARNNEHIQVITSLTNALDDESVIARLSHTTDVQEVLELLASGKAS
SIO_010081: SGP1_RS00145
subclass of: SO_0000673
so part of: SGP1_RS00145
location: 27270..29195
location: region:27270-29195:1
so has part: feature:27270-29195:1:exon

WP_011409879.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27270-29195:1:exon

SGP1_RS00150
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00150
old locus tag: SG0015
so part of: sequence
location: 29282..30430
location: region:29282-30430:1
so has part: feature:29282-30430:1:exon
subclass of: SO_0000010

position:29282:1
position: 29282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30430:1
position: 30430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29282-30430:1:exon

SGP1_RS00150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00150
old locus tag: SG0015
EC number: 1.1.1.17
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015842250.1
GO function: GO:0008926 - mannitol-1-phosphate 5-dehydrogenase activity [Evidence IEA]
GO process: GO:0019594 - mannitol metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: mannitol-1-phosphate 5-dehydrogenase
translation: MKVLHFGAGNIGRGFIGKLLADAGVEVVFADVNQQVLDALNQRHQYQVRVVGEQAQVETVRGVSAVHSGSDDVVALIASVDLVTAAVGPQILERIAPAIARGLVKRHDGGGTQPLNIIACENMVRGTSQLKQHVLNALEPRYHAWVDQHVGFVDSAVDRIVPPVEAGSDDPLAVTVESFSEWILDKTQFKGVPPALGGMELTDNLMAFMERKLFTLNTGHAITAYLGQLAGHQTIRDAILDPAVRQTVKGAMEESGAVLINRYGFDARKHAAYINKILQRFENPYLHDDVERVGRQPLRKLGAGDRLIKPLRGTLEYGLGDANLVTGIAAAMHYHSDQDPQAKEWAALLAEVGPQAALAKVSGLEEDSEVVAQVVNAYNAMQ
SIO_010081: SGP1_RS00150
subclass of: SO_0000673
so part of: SGP1_RS00150
location: 29282..30430
location: region:29282-30430:1
so has part: feature:29282-30430:1:exon

WP_011409880.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29282-30430:1:exon

SGP1_RS00155
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00155
old locus tag: SG0016
so part of: sequence
location: 30489..31037
location: region:30489-31037:1
so has part: feature:30489-31037:1:exon
subclass of: SO_0000010

position:30489:1
position: 30489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31037:1
position: 31037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30489-31037:1:exon

SGP1_RS00155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00155
old locus tag: SG0016
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004137764.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MltR family transcriptional regulator
translation: MTENTQLLENSVLERLNAGTTVREFLRAAITLLAEAVAILVTQVFRKDDYAVKYAVEPLLVGAGPLVELSVRLKLVYALGVISRQEYEDAELLMALHEELKQDPGDYRFTDDEILGPFGELHCVAAFPPSPQISRAPEDEALTKMQRQRYQQMVRSTMVLSATEYLVRISAKKAFSDRLLLK
SIO_010081: SGP1_RS00155
subclass of: SO_0000673
so part of: SGP1_RS00155
location: 30489..31037
location: region:30489-31037:1
so has part: feature:30489-31037:1:exon

WP_011409881.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30489-31037:1:exon

SGP1_RS00160
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: sodA
locus tag: SGP1_RS00160
old locus tag: SG0017
so part of: sequence
location: complement(31283..31900)
location: region:31283-31900:-1
so has part: feature:31283-31900:-1:exon
subclass of: SO_0000010

position:31283:-1
position: 31283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31900:-1
position: 31900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31283-31900:-1:exon

SGP1_RS00160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: sodA
locus tag: SGP1_RS00160
old locus tag: SG0017
EC number: 1.15.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010345169.1
GO function: GO:0004784 - superoxide dismutase activity [Evidence IEA]
GO process: GO:0006801 - superoxide metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: superoxide dismutase [Mn]
translation: MSFTLPSLLYGYDALEPHFDKETMEIHHTKHHQTYVNNTNGALESLPEFANLPVDDLIQKLDQLPADKKTMLRNNAGGHANHSLFWKGLKQGTTLQGELKSAIERDFGSVDAFKEAFEKAAATRFGSGWAWLVKKDGKLAIVSTANQDNPLMGEAISGTSGYPILCLDVWEHAYYLKYQNRRPDYIKSFWNVVNWDEAAARFSHS
SIO_010081: SGP1_RS00160
subclass of: SO_0000673
so part of: SGP1_RS00160
location: complement(31283..31900)
location: region:31283-31900:-1
so has part: feature:31283-31900:-1:exon

WP_011409882.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31283-31900:-1:exon

SGP1_RS00165
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00165
pseudo: true
so part of: sequence
location: complement(32029..>32259)
location: region:32029-32259:-1
so has part: feature:32029-32259:-1:exon
subclass of: SO_0000010

position:32029:-1
position: 32029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32259:-1
position: 32259
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32029-32259:-1:exon

SGP1_RS00165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00165
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004718312.1
GO function: GO:0016783 - sulfurtransferase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: formate dehydrogenase accessory sulfurtransferase FdhD
SIO_010081: SGP1_RS00165
subclass of: SO_0000673
so part of: SGP1_RS00165
location: complement(32029..>32259)
location: region:32029-32259:-1
so has part: feature:32029-32259:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32029-32259:-1:exon

SGP1_RS26070
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS26070
pseudo: true
so part of: sequence
location: complement(<32647..33385)
location: region:32647-33385:-1
so has part: feature:32647-33385:-1:exon
subclass of: SO_0000010

position:32647:-1
position: 32647
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:33385:-1
position: 33385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32647-33385:-1:exon

SGP1_RS26070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS26070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012303331.1
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: MFS transporter
SIO_010081: SGP1_RS26070
subclass of: SO_0000673
so part of: SGP1_RS26070
location: complement(<32647..33385)
location: region:32647-33385:-1
so has part: feature:32647-33385:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32647-33385:-1:exon

SGP1_RS22780
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS22780
so part of: sequence
location: 33724..33993
location: region:33724-33993:1
so has part: feature:33724-33993:1:exon
subclass of: SO_0000010

position:33724:1
position: 33724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33993:1
position: 33993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33724-33993:1:exon

SGP1_RS22780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS22780
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFANMLNSASRVAVPLFMMISGYLFYGERAATKKHLFRLAGCLLFYSVVGLVYMALLTPISAQQALSGILQNIIYGISTLLLLSICCRR
SIO_010081: SGP1_RS22780
subclass of: SO_0000673
so part of: SGP1_RS22780
location: 33724..33993
location: region:33724-33993:1
so has part: feature:33724-33993:1:exon

WP_050747268.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33724-33993:1:exon

SGP1_RS22785
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS22785
so part of: sequence
location: 33990..34244
location: region:33990-34244:1
so has part: feature:33990-34244:1:exon
subclass of: SO_0000010

position:33990:1
position: 33990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34244:1
position: 34244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33990-34244:1:exon

SGP1_RS22785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS22785
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIQLKALSAGHLADVKIVPVNLFINGNMVYYLLYAIFGRAIGLLTLDNKRVTPLAAVVFLLAVVLIAAVSLFIWFKSALVSMAL
SIO_010081: SGP1_RS22785
subclass of: SO_0000673
so part of: SGP1_RS22785
location: 33990..34244
location: region:33990-34244:1
so has part: feature:33990-34244:1:exon

WP_148203308.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33990-34244:1:exon

SGP1_RS00180
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00180
so part of: sequence
location: complement(34213..34515)
location: region:34213-34515:-1
so has part: feature:34213-34515:-1:exon
subclass of: SO_0000010

position:34213:-1
position: 34213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34515:-1
position: 34515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34213-34515:-1:exon

SGP1_RS00180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00180
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMIETLSLTDAVKGVPNNTLPVVIYRGVIPGGTVHPTVWLERHFAANGWPAQWCYGIYPFTHFHSNTHELLGVYAGQAQIQLGGETGPASVIKPLRPARI
SIO_010081: SGP1_RS00180
subclass of: SO_0000673
so part of: SGP1_RS00180
location: complement(34213..34515)
location: region:34213-34515:-1
so has part: feature:34213-34515:-1:exon

WP_050747270.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34213-34515:-1:exon

SGP1_RS00185
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00185
old locus tag: SG0018
pseudo: true
so part of: sequence
location: 34679..35278
location: region:34679-35278:1
so has part: feature:34679-35278:1:exon
subclass of: SO_0000010

position:34679:1
position: 34679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35278:1
position: 35278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34679-35278:1:exon

SGP1_RS00185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00185
old locus tag: SG0018
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015839757.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: nitroreductase family protein
SIO_010081: SGP1_RS00185
subclass of: SO_0000673
so part of: SGP1_RS00185
location: 34679..35278
location: region:34679-35278:1
so has part: feature:34679-35278:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:34679-35278:1:exon

SGP1_RS00190
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00190
old locus tag: SG0019
so part of: sequence
location: complement(35597..36805)
location: region:35597-36805:-1
so has part: feature:35597-36805:-1:exon
subclass of: SO_0000010

position:35597:-1
position: 35597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36805:-1
position: 36805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35597-36805:-1:exon

SGP1_RS00190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00190
old locus tag: SG0019
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012145067.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: multidrug efflux MFS transporter
translation: MEAWKVNIISVWLGCFFTGLAMSQILPFLPLYVEQLGVRSHESLSLWSGMVFSATFLVSAIVSPLWGSMADRRGRKLMLLRASLGMAVVIALQAFVTSVWQLLLLRALMGLTSGYVPNAMALVASQVPRDKSGWAFAILSTGQVSGVIIGPLLGGFMADHLGLRVVFLITAALMTVSFLITLVLIKERVVTVKKADQLHGRAVFAALPYPRLILTLFVTTMMIQLTNSSISPILTLFIKELSSDHDNLAFISGAIAAVPGVSALLAAPRLGRLGDRIGTARVLMTALGCLIALFCIMALVRTPLQLGILRFLMGFAEGALMPAVQTLLVKYSSDQVTGRVFGYNQSFMYLGNVAGPLVGSSISALLGFRWVFIATAALVLINTWQLHAGIHKLSVARERKSV
SIO_010081: SGP1_RS00190
subclass of: SO_0000673
so part of: SGP1_RS00190
location: complement(35597..36805)
location: region:35597-36805:-1
so has part: feature:35597-36805:-1:exon

WP_011409884.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35597-36805:-1:exon

SGP1_RS00195
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00195
pseudo: true
so part of: sequence
location: complement(36899..37448)
location: region:36899-37448:-1
so has part: feature:36899-37448:-1:exon
subclass of: SO_0000010

position:36899:-1
position: 36899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37448:-1
position: 37448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36899-37448:-1:exon

SGP1_RS00195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00195
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010257434.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: GTP pyrophosphokinase
SIO_010081: SGP1_RS00195
subclass of: SO_0000673
so part of: SGP1_RS00195
location: complement(36899..37448)
location: region:36899-37448:-1
so has part: feature:36899-37448:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:36899-37448:-1:exon

SGP1_RS00200
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00200
old locus tag: SG0020
so part of: sequence
location: 37556..38014
location: region:37556-38014:1
so has part: feature:37556-38014:1:exon
subclass of: SO_0000010

position:37556:1
position: 37556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38014:1
position: 38014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37556-38014:1:exon

SGP1_RS00200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00200
old locus tag: SG0020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017798975.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MarR family transcriptional regulator
translation: MNTSANNSQDDVLLLLDQQFCFSLYSANLALNKVYRKLLAKLDLTYPQYLVMLVLWERDAVTVSDIGERLFLDSATLTPLLKRMESAGLLGRFRSADDERKVIIRLTDKGRSLRVLAATIPADILCASSCSAEEFGALKRELETLRGHLAQW
SIO_010081: SGP1_RS00200
subclass of: SO_0000673
so part of: SGP1_RS00200
location: 37556..38014
location: region:37556-38014:1
so has part: feature:37556-38014:1:exon

WP_011409885.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37556-38014:1:exon

SGP1_RS26075
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS26075
pseudo: true
so part of: sequence
location: 38149..38579
location: region:38149-38579:1
so has part: feature:38149-38579:1:exon
subclass of: SO_0000010

position:38149:1
position: 38149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38579:1
position: 38579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38149-38579:1:exon

SGP1_RS26075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS26075
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017458241.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: organic hydroperoxide resistance protein
SIO_010081: SGP1_RS26075
subclass of: SO_0000673
so part of: SGP1_RS26075
location: 38149..38579
location: region:38149-38579:1
so has part: feature:38149-38579:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:38149-38579:1:exon

SGP1_RS31095
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS31095
so part of: sequence
location: complement(38460..38723)
location: region:38460-38723:-1
so has part: feature:38460-38723:-1:exon
subclass of: SO_0000010

position:38460:-1
position: 38460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38723:-1
position: 38723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38460-38723:-1:exon

SGP1_RS31095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS31095
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVIEQRNSDRLKFFDKENSKKFSHKRSGKRNAGMNTPEDDSPGHSEKVLSGNDLQRDIDVIAGSVGIRAHHMGFLDQIFRHAALAHR
SIO_010081: SGP1_RS31095
subclass of: SO_0000673
so part of: SGP1_RS31095
location: complement(38460..38723)
location: region:38460-38723:-1
so has part: feature:38460-38723:-1:exon

WP_041866478.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38460-38723:-1:exon

SGP1_RS00210
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: eptB
locus tag: SGP1_RS00210
pseudo: true
so part of: sequence
location: 38801..40503
location: region:38801-40503:1
so has part: feature:38801-40503:1:exon
subclass of: SO_0000010

position:38801:1
position: 38801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40503:1
position: 40503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38801-40503:1:exon

SGP1_RS00210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: eptB
locus tag: SGP1_RS00210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013507302.1
GO function: GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: kdo(2)-lipid A phosphoethanolamine 7''-transferase
SIO_010081: SGP1_RS00210
subclass of: SO_0000673
so part of: SGP1_RS00210
location: 38801..40503
location: region:38801-40503:1
so has part: feature:38801-40503:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:38801-40503:1:exon

SGP1_RS00215
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00215
old locus tag: SGtRNA01
so part of: sequence
location: 40585..40661
location: region:40585-40661:1
so has part: feature:40585-40661:1:exon
subclass of: SO_0000663

position:40585:1
position: 40585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40661:1
position: 40661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40585-40661:1:exon

SGP1_RS00215
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 343509
locus tag: SGP1_RS00215
old locus tag: SGtRNA01
product: tRNA-Pro
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:40619..40621,aa:Pro,seq:cgg)
SIO_010081: SGP1_RS00215
subclass of: SO_0000673
so part of: SGP1_RS00215
location: 40585..40661
location: region:40585-40661:1
so has part: feature:40585-40661:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:40585-40661:1:exon

SGP1_RS00220
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: flhD
locus tag: SGP1_RS00220
old locus tag: SG0021
so part of: sequence
location: 41671..42015
location: region:41671-42015:1
so has part: feature:41671-42015:1:exon
subclass of: SO_0000010

position:41671:1
position: 41671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42015:1
position: 42015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41671-42015:1:exon

SGP1_RS00220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: flhD
locus tag: SGP1_RS00220
old locus tag: SG0021
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005270968.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0045893 - positive regulation of DNA-templated transcription [Evidence IEA]; GO:1902208 - regulation of bacterial-type flagellum assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar transcriptional regulator FlhD
translation: MSSDNLLRNIHEINLSYLLLAQELIKKDKKVAGFRLGVGEDTLDKLAGLSLSELIKLGEINQLICLLRLDDEQIINCLTRESRVDELQQVHTGIVLSTQLLNSATPDPTRLLKE
SIO_010081: SGP1_RS00220
subclass of: SO_0000673
so part of: SGP1_RS00220
location: 41671..42015
location: region:41671-42015:1
so has part: feature:41671-42015:1:exon

WP_025420390.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41671-42015:1:exon

SGP1_RS00225
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: flhC
locus tag: SGP1_RS00225
old locus tag: SG0022
so part of: sequence
location: 42020..42610
location: region:42020-42610:1
so has part: feature:42020-42610:1:exon
subclass of: SO_0000010

position:42020:1
position: 42020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42610:1
position: 42610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42020-42610:1:exon

SGP1_RS00225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: flhC
locus tag: SGP1_RS00225
old locus tag: SG0022
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011409887.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0045893 - positive regulation of DNA-templated transcription [Evidence IEA]; GO:1902208 - regulation of bacterial-type flagellum assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar transcriptional regulator FlhC
translation: MYRKSIMQESRDIQLAMELIALGARLPILENETCLSRSRLLRLYKEVKGTPAPKGLLPFSADWFLSWEQNIHSSAFYNAYLCLIRVGNIPTIEAMIKAYRLYLELCPQRQDGGPLLGLTRAWILLRFIDSQLLGQTRCKLCGGAFITYAFHPPHNFVCSFCHPPSRAVKKRKLSHAAADNRIYNLRQRNMCNVKPC
SIO_010081: SGP1_RS00225
subclass of: SO_0000673
so part of: SGP1_RS00225
location: 42020..42610
location: region:42020-42610:1
so has part: feature:42020-42610:1:exon

WP_011409887.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42020-42610:1:exon

SGP1_RS00230
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: motA
locus tag: SGP1_RS00230
old locus tag: SG0023
so part of: sequence
location: 42706..43602
location: region:42706-43602:1
so has part: feature:42706-43602:1:exon
subclass of: SO_0000010

position:42706:1
position: 42706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43602:1
position: 43602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42706-43602:1:exon

SGP1_RS00230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: motA
locus tag: SGP1_RS00230
old locus tag: SG0023
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015834823.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar motor stator protein MotA
translation: MLVIVGYIIVFMSIFGGFLLAEGQLGALFQPAEFMIIVGAGLGTFIVGNNGKAIFATLKSFPRLFHSSRYNKAMYMDVMALMYRLLSKSRQSGLITLEKEIDDPHNSVIFAHYPSLLADKLVIDFLIDYLRLMVSGNLNVYEIEALMNEEIETYEQENDIPVSSLLQVGDALPAFGIIAAVMGVVNALAAADRPAGELGALIANAMVGTLLGILLAYGCVMPLGALLKQKGDEHIKMLQCIRVTLLSSLNGYAPPIAIEFGRKTLYSSERPSFDELEAHLRRIKKAGLMESAETTVNS
SIO_010081: SGP1_RS00230
subclass of: SO_0000673
so part of: SGP1_RS00230
location: 42706..43602
location: region:42706-43602:1
so has part: feature:42706-43602:1:exon

WP_011409888.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42706-43602:1:exon

SGP1_RS00235
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: motB
locus tag: SGP1_RS00235
old locus tag: SG0024
so part of: sequence
location: 43599..44624
location: region:43599-44624:1
so has part: feature:43599-44624:1:exon
subclass of: SO_0000010

position:43599:1
position: 43599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44624:1
position: 44624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43599-44624:1:exon

SGP1_RS00235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: motB
locus tag: SGP1_RS00235
old locus tag: SG0024
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013508779.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar motor protein MotB
translation: MKKPSPPVVIKWRRAQNANHYVGSWKIAYADFMTAMMAFFMVMWMLGATTPQQREQIADYFKMPLKEALTHNGKFNMGNIPLPVDAKDTDGLTRLRQRELEHQRDIQRLKNTRHRLEQMLRNDPRLRELQPNMRITLVHDGLRIEIIDSKKRPMFATGGTAIAPYMRSILRIIAPVLDNLPNRISLAGHTDNQPYLNGERGYGNWELSTDRANASRRELVEGGLAGDKILRVIGMANTMAPAGKVDDNAAQRRISIVILTREKEEAIRQENTQSVSEEIDGGKDAAAQLWRLASPPAGKGSAPASSAKPVAPAPPKAASATEVSPAAQADAASSAPVKGKG
SIO_010081: SGP1_RS00235
subclass of: SO_0000673
so part of: SGP1_RS00235
location: 43599..44624
location: region:43599-44624:1
so has part: feature:43599-44624:1:exon

WP_011409889.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43599-44624:1:exon

SGP1_RS00240
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: flhB
locus tag: SGP1_RS00240
old locus tag: SG0025
so part of: sequence
location: 45031..46194
location: region:45031-46194:1
so has part: feature:45031-46194:1:exon
subclass of: SO_0000010

position:45031:1
position: 45031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46194:1
position: 46194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45031-46194:1:exon

SGP1_RS00240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: flhB
locus tag: SGP1_RS00240
old locus tag: SG0025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004934847.1
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar biosynthesis protein FlhB
translation: MAEESDLEKSEAPTPHRLQKARKEGQVPRSKELVSWLMLLSGWSLLWLAGGHLAQGMGLMLESGLTFSFHINGDRHWLLAQFSGLVRQALLACAPLILGVTLVAAGAPMLIGGVMFSSKAVSLDLKRLNPFSGLKRLFSMQMIAEFIKTLFKVCLVGGACGTALWFVWPRMTQLAQGAPHRVMAESLSLISQCVLVIILALIPVVGFDILYQLFSHMKKLRMSRHDIREEYKEQEGDPQLKSLIRQRQRQQAQQRMMQDVAKADVVILNPTHYAVALKYEQMRMTTPRLLAKGAGAVALNIRQRAEQHRIPTLVAPPLARALFRHCEIGSAIPVALYGAVAEVLAWVYGLRRWRKQGGLRPRQPGNLTVPKAMDCAKGSIFNGKPGS
SIO_010081: SGP1_RS00240
subclass of: SO_0000673
so part of: SGP1_RS00240
location: 45031..46194
location: region:45031-46194:1
so has part: feature:45031-46194:1:exon

WP_011409890.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45031-46194:1:exon

SGP1_RS00245
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: flhA
locus tag: SGP1_RS00245
old locus tag: SG0026
so part of: sequence
location: 46175..48271
location: region:46175-48271:1
so has part: feature:46175-48271:1:exon
subclass of: SO_0000010

position:46175:1
position: 46175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48271:1
position: 48271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46175-48271:1:exon

SGP1_RS00245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: flhA
locus tag: SGP1_RS00245
old locus tag: SG0026
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013202545.1
GO component: GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar biosynthesis protein FlhA
translation: MVNLVAKLHLTDFSQTRWQIFAGPIVIIMILSMMILPLPPFALDLFFTFNIVLSIMILLVAMFTQRTLDFAAFPTVLLFSTLLRLALNVASARVILLHGHRGEAAAGQVIDAFGHFLVGGNFAIGIVVFAILVIINFMVITKGAGRIAEVGARFVLDGMPGKQMAIDADLNAGLIGEEEAKQRRAEVTQEADFYGSMDGASKFVRGDAIAGLLIMAINLIGGLLVGVLQHGMDLGRAGDTYTLLTIGDGLVAQIPALVISTAAGVIVTRVATHQDVGEQMVSQLFNNPRVMMLSAAVIGLLGLVPGMPNVVFLLFTLLLLGIAWLLRHHTVMRGEATAGGAPRDNPAPETRQNEEASWDDVQTEDTLGLEVGYRLIPMVDSGQGAELLKRIRGIRKKFAREMGYLPPVVHIRDNLEIPPTHYRILLHGVEIGCGDTYPECWMAINPGSANDTLPGDPCQEPAFGLPAVWIDQVLCDEAKALGYTVVDASTVVATHFNQLLMQHAEELFGRQETQQLLEHLGREMPKLTEDLIPDVLSLTTLHKVLQNLLAEQVSIRDMRSIVECLAEHAPQQNDVDMLTSLVRHKLARAITQRWFPGTGDIQVIGLEVVLEQVLIQAVQNGGALEPGVADRLLVQAERALQRQLALGAPTVLLVNPILRAMLSRFLRRSLPQLTVLASTEIADNRPVRFNTMIGAAVD
SIO_010081: SGP1_RS00245
subclass of: SO_0000673
so part of: SGP1_RS00245
location: 46175..48271
location: region:46175-48271:1
so has part: feature:46175-48271:1:exon

WP_011409891.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46175-48271:1:exon

SGP1_RS28820
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS28820
so part of: sequence
location: 48484..48696
location: region:48484-48696:1
so has part: feature:48484-48696:1:exon
subclass of: SO_0000010

position:48484:1
position: 48484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48696:1
position: 48696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48484-48696:1:exon

SGP1_RS28820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS28820
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: flagellar protein FlhE
translation: MAHSITGTAPPPGFSLMLCGKERYVRLHTLVGQGTGLVGARGPFYFVYRYTPDGKSSPLEVSQQLTVDFT
SIO_010081: SGP1_RS28820
subclass of: SO_0000673
so part of: SGP1_RS28820
location: 48484..48696
location: region:48484-48696:1
so has part: feature:48484-48696:1:exon

WP_148203309.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48484-48696:1:exon

SGP1_RS00255
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00255
old locus tag: SG0027
so part of: sequence
location: complement(48762..49205)
location: region:48762-49205:-1
so has part: feature:48762-49205:-1:exon
subclass of: SO_0000010

position:48762:-1
position: 48762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49205:-1
position: 49205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48762-49205:-1:exon

SGP1_RS00255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00255
old locus tag: SG0027
inference: COORDINATES: protein motif:HMM:NF016985.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar protein FlgN
translation: MDNLTLALRQLDQALDKLGQILQAEYQLLMAVPLQPVALQGVTHDKSQQLSAVAYYDALRQRAEVNCGLRAPYACHPDLDDLWALIQARTRDLHELNQRNGVSLEAQMAHVRSLSSAIKALAPQQMFYCADGASHHGMRLQNLDINA
SIO_010081: SGP1_RS00255
subclass of: SO_0000673
so part of: SGP1_RS00255
location: complement(48762..49205)
location: region:48762-49205:-1
so has part: feature:48762-49205:-1:exon

WP_011409892.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48762-49205:-1:exon

SGP1_RS00260
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00260
old locus tag: SG0028
so part of: sequence
location: complement(49244..49468)
location: region:49244-49468:-1
so has part: feature:49244-49468:-1:exon
subclass of: SO_0000010

position:49244:-1
position: 49244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49468:-1
position: 49468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49244-49468:-1:exon

SGP1_RS00260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00260
old locus tag: SG0028
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: flagellar biosynthesis protein FlgM
translation: MSIERTLPAHAIMAVVNDLRHGQEITLSDTRLQMRRQDVDPNLVAQLQHAIGQGKLIMDSGRVADALLMNAWQN
SIO_010081: SGP1_RS00260
subclass of: SO_0000673
so part of: SGP1_RS00260
location: complement(49244..49468)
location: region:49244-49468:-1
so has part: feature:49244-49468:-1:exon

WP_011409893.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49244-49468:-1:exon

SGP1_RS00265
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: flgA
locus tag: SGP1_RS00265
old locus tag: SG0029
so part of: sequence
location: complement(49511..50131)
location: region:49511-50131:-1
so has part: feature:49511-50131:-1:exon
subclass of: SO_0000010

position:49511:-1
position: 49511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50131:-1
position: 50131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49511-50131:-1:exon

SGP1_RS00265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: flgA
locus tag: SGP1_RS00265
old locus tag: SG0029
inference: COORDINATES: protein motif:HMM:TIGR03170.1
GO component: GO:0009428 - bacterial-type flagellum basal body, distal rod, P ring [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar basal body P-ring formation chaperone FlgA
translation: MTRLESLLRQQRPDRSLVQKVTLITPARLLPDCPSPQLQLASYGRLSGNMSVTARCGARRYFLQIKVSARGDYWVAARGLPSGTALGSKNVARENGELAGQPRNVIFATQPVTGSLTTRAIQAGQPLTANMLRAPWKVRQGNPVAVVSRGPGFQVRHYGKAMSDAAVGDALRVRLASGQMVSGAVDNQGVVLQNALPFSSFTAPVR
SIO_010081: SGP1_RS00265
subclass of: SO_0000673
so part of: SGP1_RS00265
location: complement(49511..50131)
location: region:49511-50131:-1
so has part: feature:49511-50131:-1:exon

WP_050747273.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49511-50131:-1:exon

SGP1_RS00270
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: flgB
locus tag: SGP1_RS00270
old locus tag: SG0030
so part of: sequence
location: 50405..50818
location: region:50405-50818:1
so has part: feature:50405-50818:1:exon
subclass of: SO_0000010

position:50405:1
position: 50405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50818:1
position: 50818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50405-50818:1:exon

SGP1_RS00270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: flgB
locus tag: SGP1_RS00270
old locus tag: SG0030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004392144.1
GO component: GO:0009429 - bacterial-type flagellum basal body, proximal rod [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar basal body rod protein FlgB
translation: MFNKINEEIHFQQAALNILNRRQDVLAANIANADTPGYQARDIPFTRELRRAIEQGQQRSNNLSLSLTSRQHIPAEGVAHADHSLLYRIPDQPSADGNTVDMDRERVNFADNGMKYQASLSFINGQIKSMMSVLSKG
SIO_010081: SGP1_RS00270
subclass of: SO_0000673
so part of: SGP1_RS00270
location: 50405..50818
location: region:50405-50818:1
so has part: feature:50405-50818:1:exon

WP_011409895.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50405-50818:1:exon

SGP1_RS00275
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: flgC
locus tag: SGP1_RS00275
old locus tag: SG0031
so part of: sequence
location: 50825..51229
location: region:50825-51229:1
so has part: feature:50825-51229:1:exon
subclass of: SO_0000010

position:50825:1
position: 50825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51229:1
position: 51229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50825-51229:1:exon

SGP1_RS00275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: flgC
locus tag: SGP1_RS00275
old locus tag: SG0031
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005970694.1
GO component: GO:0009425 - bacterial-type flagellum basal body [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar basal body rod protein FlgC
translation: MSLFSIFDISGSALMAQSQRLNVSASNMANADSVTGPDGEPYRAKQVVFQLDAALGQPVGGVRVSQVVEDPAPWRLVYDPGHPLANDRGYIRMPNVNRVAEMVNTLSASRSYQANVEVINSARSMMMKTLAMGQ
SIO_010081: SGP1_RS00275
subclass of: SO_0000673
so part of: SGP1_RS00275
location: 50825..51229
location: region:50825-51229:1
so has part: feature:50825-51229:1:exon

WP_011409896.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50825-51229:1:exon

SGP1_RS00280
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00280
old locus tag: SG0032
so part of: sequence
location: 51241..52050
location: region:51241-52050:1
so has part: feature:51241-52050:1:exon
subclass of: SO_0000010

position:51241:1
position: 51241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52050:1
position: 52050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51241-52050:1:exon

SGP1_RS00280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00280
old locus tag: SG0032
inference: COORDINATES: protein motif:HMM:NF015896.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar hook capping FlgD N-terminal domain-containing protein
translation: MELAGLAPSEYSRGASPLLASRNASATGNNFALNAQTRGALKAGNNDAAISDSRAATSAMDAQSQGTQELMDNFLQMMLAQIKNQDPTNPMDNNQLASQMAQMHVALGVEKLNNTVLGMGNMVNSVQAVNLSNWVGRTVLIVGKPSVSFEGQTAYGFELPSGADEVRVTFTDEQGKTYTQDYKDVKPGAYKLDICKTQTMPPIVLSPLDDEKAKHYDVSIEAKNKDESRPTVNALKAAKVENVFFSNGSAKLALGLDGSIYLKDVILVE
SIO_010081: SGP1_RS00280
subclass of: SO_0000673
so part of: SGP1_RS00280
location: 51241..52050
location: region:51241-52050:1
so has part: feature:51241-52050:1:exon

WP_011409897.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51241-52050:1:exon

SGP1_RS00285
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: flgE
locus tag: SGP1_RS00285
old locus tag: SG0033
so part of: sequence
location: 52102..53316
location: region:52102-53316:1
so has part: feature:52102-53316:1:exon
subclass of: SO_0000010

position:52102:1
position: 52102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53316:1
position: 53316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52102-53316:1:exon

SGP1_RS00285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: flgE
locus tag: SGP1_RS00285
old locus tag: SG0033
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015571597.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar hook protein FlgE
translation: MGFAQGVSGLNAAAQALDVIGNNIANAQTVGFKSSSASFADMFSESMIGLGVQLAGVQQDFNDGTMIAGAGNINMAIAGSGFFRLADNGGKIYYSRNGEFERNKYGEIVNKQGKYLTGYKATGTPLGNITVPDTPMPGAVSTEGSLGDNLPSNSEPPKVAEFDIKEPKSYNYSTQFTAYDSLGNPHNIKVYYIKGKEAGQWTVKCYDETAPVLLDPNDKDKKPKIFSQDITFDAYGNLDEKTTPKLPFESAKLNGANELKFDITLFGLKQQGTEWTMSLPQTNGYAVGKFNGYSVGDNGEIIASYSNQQTQLIAQVVMASFTNTGGLQPSGDNCWTETGASGAPLIGTSDTGSFGVIRGKMLEASNVDMSNELVKMMTQQRNYQSNAQTIKTQDQLLQTLVSMR
SIO_010081: SGP1_RS00285
subclass of: SO_0000673
so part of: SGP1_RS00285
location: 52102..53316
location: region:52102-53316:1
so has part: feature:52102-53316:1:exon

WP_011409898.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52102-53316:1:exon

SGP1_RS00290
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00290
old locus tag: SG0034
so part of: sequence
location: 53329..54087
location: region:53329-54087:1
so has part: feature:53329-54087:1:exon
subclass of: SO_0000010

position:53329:1
position: 53329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54087:1
position: 54087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53329-54087:1:exon

SGP1_RS00290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00290
old locus tag: SG0034
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004159246.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar basal body rod protein FlgF
translation: MDRAIYTAMGAASAALTQQSVAANNLANAATTGFRAQLAAFRAAPVNGPTLATRTLVVPSVPGNDFSPGPINISGNNLDVALDQHGWLAVRLPDGGEAYTRNGRIEIDSAGGLRVQNYLLLGADSQPLTVLPGAAVTFGPDGTLSVLGDGDEPKTLVQIGQLKLVRLEPDSLRHDDSGLFNLTDTARAQRGAVLPADPTLRLTPGAFEGSNVSPVQTMVEMIGNARSFEMQMKVISNVNDNARAGNQLLAIG
SIO_010081: SGP1_RS00290
subclass of: SO_0000673
so part of: SGP1_RS00290
location: 53329..54087
location: region:53329-54087:1
so has part: feature:53329-54087:1:exon

WP_011409899.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53329-54087:1:exon

SGP1_RS00295
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: flgG
locus tag: SGP1_RS00295
old locus tag: SG0035
so part of: sequence
location: 54108..54890
location: region:54108-54890:1
so has part: feature:54108-54890:1:exon
subclass of: SO_0000010

position:54108:1
position: 54108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54890:1
position: 54890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54108-54890:1:exon

SGP1_RS00295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: flgG
locus tag: SGP1_RS00295
old locus tag: SG0035
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004392149.1
GO component: GO:0009426 - bacterial-type flagellum basal body, distal rod [Evidence IEA]
GO process: GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar basal-body rod protein FlgG
translation: MMRSLMIAKTGLEAQQTNMDVISNNIANVSTMGFKRQQAVFEDLLYQTVRQPGAKSSEQTTIPSGLQLGTGVRPVATTRIHLQGGLTNTGNPTDVAIEGSGFLQVLMPDGTNAYTRDGSLQRDQYGQLVTSSGYPIQPAVMIPNGASNLTISKDGLVSVALPGQTEPQEVGQLNLATFINDAGLQSLGENLYYETPSSGAPMENKPGMNGAGALKQQFLENSNVNVAQELITMIQAQRAYELNSKAISTSDQMLQRLAQL
SIO_010081: SGP1_RS00295
subclass of: SO_0000673
so part of: SGP1_RS00295
location: 54108..54890
location: region:54108-54890:1
so has part: feature:54108-54890:1:exon

WP_011409900.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54108-54890:1:exon

SGP1_RS00300
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00300
old locus tag: SG0036
so part of: sequence
location: 54963..55715
location: region:54963-55715:1
so has part: feature:54963-55715:1:exon
subclass of: SO_0000010

position:54963:1
position: 54963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55715:1
position: 55715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54963-55715:1:exon

SGP1_RS00300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00300
old locus tag: SG0036
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014353847.1
GO component: GO:0009427 - bacterial-type flagellum basal body, distal rod, L ring [Evidence IEA]
GO function: GO:0003774 - cytoskeletal motor activity [Evidence IEA]
GO process: GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar basal body L-ring protein FlgH
translation: MTQLTSPRFAGCRRHGTRAAHRALIRGSGIALATLLLGGCAAPPPRPLVAGATTAAPAAPMPIAVNGSVFQPGQAMNYGYQPLFEDRRPRNIGDTLTIMLQENVSASKSSSSNADRKGNADLGINALPSMLNGLIGGDRLATDIESSNGFNGKGGAAAKNTFSGTITVTVIDVLTNGNLRVVGEKQIAINQGTEFIRFSGIVNPRTIDGNNQVVSTLVSDARIEYVGDGYINEAQQMGWLQRFFLNYFPF
SIO_010081: SGP1_RS00300
subclass of: SO_0000673
so part of: SGP1_RS00300
location: 54963..55715
location: region:54963-55715:1
so has part: feature:54963-55715:1:exon

WP_148203630.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54963-55715:1:exon

SGP1_RS00305
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00305
old locus tag: SG0037
so part of: sequence
location: 55746..56843
location: region:55746-56843:1
so has part: feature:55746-56843:1:exon
subclass of: SO_0000010

position:55746:1
position: 55746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56843:1
position: 56843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55746-56843:1:exon

SGP1_RS00305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00305
old locus tag: SG0037
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011409902.1
GO component: GO:0009428 - bacterial-type flagellum basal body, distal rod, P ring [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar basal body P-ring protein FlgI
translation: MMLSLCAIAGLLLAPSIQAERIRDLTTVLGVRENALIGYGLVVGLDGTGDQTTQTPFTTQSLRNMLSQLGVAVPTGTNMQLKNVAAVMVTAKLPAFARAGQKIDVVVSSLGSAKSLRGGTLLMTPLKGVDNQVYALAQGNILVSGSGAQAGGNRVQVNQLNGGRISGGAIVERSVPADFAGGNVIMLQLNNDDFSLAQQISDAINRHFGHRSALPLDSRTINVAVPPDGPGKVRFLASLQNIPITLGPTDAVVVINSRTGSVVMNRDVVLGSCAVAHGELTVEVNRTYKVSQPDTPFGGGRTVVVPETAINVRNEGGALQQIDAGANLNDVVSALNGIGATPNDLMAILQSMQSTGCLNAKLEIN
SIO_010081: SGP1_RS00305
subclass of: SO_0000673
so part of: SGP1_RS00305
location: 55746..56843
location: region:55746-56843:1
so has part: feature:55746-56843:1:exon

WP_011409902.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55746-56843:1:exon

SGP1_RS00310
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: flgJ
locus tag: SGP1_RS00310
old locus tag: SG0038
so part of: sequence
location: 56843..57760
location: region:56843-57760:1
so has part: feature:56843-57760:1:exon
subclass of: SO_0000010

position:57760:1
position: 57760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56843-57760:1:exon

SGP1_RS00310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: flgJ
locus tag: SGP1_RS00310
old locus tag: SG0038
inference: COORDINATES: protein motif:HMM:TIGR02541.1
GO function: GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar assembly peptidoglycan hydrolase FlgJ
translation: MSDGTALFGSTLDFSQLEAMKIRAAQASRQGVADAAHQVEGLFVDMMLKSMRAALPQEGLLTSTQTQLYTSLYDQQLAQDLTARGVGLAQALRRQLGGDDAPAAQPAPRPVYQGIDPRLRPPPVQLTVDGLAFPPEAYVDAPWEWQTDTDGFIARITAPAQQAARDSGLPHQLIVAQAALESGWGAREIKTAHGAPSHNLFGIKADAGWLGESTQITTTEWVDGVMQKVKAKFRVYASYGEALRDYTRLLTENPRYRRVMQARTPEQAARSLQSSGYATDPHYADKLITIIAQLKTVGQRAQAAY
SIO_010081: SGP1_RS00310
subclass of: SO_0000673
so part of: SGP1_RS00310
location: 56843..57760
location: region:56843-57760:1
so has part: feature:56843-57760:1:exon

WP_011409903.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56843-57760:1:exon

SGP1_RS00315
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: flgK
locus tag: SGP1_RS00315
old locus tag: SG0039
so part of: sequence
location: 57892..59562
location: region:57892-59562:1
so has part: feature:57892-59562:1:exon
subclass of: SO_0000010

position:57892:1
position: 57892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59562:1
position: 59562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57892-59562:1:exon

SGP1_RS00315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: flgK
locus tag: SGP1_RS00315
old locus tag: SG0039
inference: COORDINATES: protein motif:HMM:TIGR02492.1
GO component: GO:0009424 - bacterial-type flagellum hook [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar hook-associated protein FlgK
translation: MLNLYYIASSGLQTGQQALSVIGNNLANATNPYYSRQNIILGAAGGRVTSTGHIGNGVRVEGVARAFDEYANERVRGTETLLRASSAHYDKMSSLDLEFSRTDNGIDTKLNSLFNALKDISTVPKNSNYRSSAFTALKELTGRFNKLSDELSKQEQKNNQDIRQSVNNINQLTGQLASLNREISNRQSIDGGGAYDLLDRRDALLQALSQQTGINTQIDSRTGAVNVTLSNGHMLVSGDKANALEVTTDNNNPGRQVIAYRDAENAIIPLQDSLLDKGVLGGLLAFHNQDLPEIRDRLNELALHLSNRFNQVNKQGYDDNGKEGEDLFSYALPNSIANGRNQGEASLSVTGLNTDPDAVGGVAKPQDYTLRFENGTWQVKGTADGRKVESTFVDDKLTFEGVTVAVEGDPQEGDSYQLNPFNGIADSVAVSIKNGDEIAAASKKEPQDTDGKETGNNGNSIALGNIQHEKLINGATLSDAYAGLIGYVGTTTLNLRETSSSQEKAFQDAYVERSEKTGVNLNQEYVQMEMFRQYYNASAQVLQTANSLLDTLLTIR
SIO_010081: SGP1_RS00315
subclass of: SO_0000673
so part of: SGP1_RS00315
location: 57892..59562
location: region:57892-59562:1
so has part: feature:57892-59562:1:exon

WP_011409904.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57892-59562:1:exon

SGP1_RS00320
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: flgL
locus tag: SGP1_RS00320
old locus tag: SG0040
so part of: sequence
location: 59619..60560
location: region:59619-60560:1
so has part: feature:59619-60560:1:exon
subclass of: SO_0000010

position:59619:1
position: 59619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60560:1
position: 60560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59619-60560:1:exon

SGP1_RS00320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: flgL
locus tag: SGP1_RS00320
old locus tag: SG0040
inference: COORDINATES: protein motif:HMM:TIGR02550.1
GO component: GO:0009424 - bacterial-type flagellum hook [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar hook-associated protein FlgL
translation: MNLSTHYMYQQQTQFIMSSASRFNDVAMRLSASSRVLRPSDDPAAAMDAVTYRNALAQLNYYSGTRGYARAVLTKEGDTLQTVTNTLSAINAKIMAIQKPAGGDLAPIIQELEGLRDDLLASANVQDTSGNYIFAGYKADVKPFQKVQGSDDIVYQGGATAIGQQVDEGREMKIGHIGSDIFNVEGQDTVFKKLDALIGALKSDAGNGGGGAWPGEDLKAVMDAARSAVRKTEDNVGNAQVVSGLNLQLLDHLDAAGVSQHEGITDRLQQGLGQDTGSQIALVTELSLSKVAMDSTMMVFQMMNELSLFNKIK
SIO_010081: SGP1_RS00320
subclass of: SO_0000673
so part of: SGP1_RS00320
location: 59619..60560
location: region:59619-60560:1
so has part: feature:59619-60560:1:exon

WP_011409905.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59619-60560:1:exon

SGP1_RS00325
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: fliR
locus tag: SGP1_RS00325
old locus tag: SG0041
so part of: sequence
location: complement(60611..61399)
location: region:60611-61399:-1
so has part: feature:60611-61399:-1:exon
subclass of: SO_0000010

position:60611:-1
position: 60611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61399:-1
position: 61399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60611-61399:-1:exon

SGP1_RS00325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: fliR
locus tag: SGP1_RS00325
old locus tag: SG0041
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004700942.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0044780 - bacterial-type flagellum assembly [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar biosynthetic protein FliR
translation: MLDLTALPSAIGPHFWPLARLLGLFVSAPLLSEKIIAKKVKIGLAVLITLLIAPGLEPVATPLVSVAGLWLIMAQLLIGVIVGLTLQLAFSTVRFAGEVIGLQMGLSFATFFDPFSGPNSPIIARLLNLLLLLLFLSLDAHLVMIDALVDSFQLLPIAPLPLNGESFLALARAVGLLFSCGLMLALPAMTLLLLLNITLGVLNRLTPQFSVFVIGFPLTLGGGLLALMLVMPLLATFAEGLFTTLFQHLSAILTTMVGGQQA
SIO_010081: SGP1_RS00325
subclass of: SO_0000673
so part of: SGP1_RS00325
location: complement(60611..61399)
location: region:60611-61399:-1
so has part: feature:60611-61399:-1:exon

WP_011409906.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60611-61399:-1:exon

SGP1_RS00330
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: fliQ
locus tag: SGP1_RS00330
old locus tag: SG0042
so part of: sequence
location: complement(61407..61676)
location: region:61407-61676:-1
so has part: feature:61407-61676:-1:exon
subclass of: SO_0000010

position:61407:-1
position: 61407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61676:-1
position: 61676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61407-61676:-1:exon

SGP1_RS00330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: fliQ
locus tag: SGP1_RS00330
old locus tag: SG0042
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013365797.1
GO component: GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar biosynthesis protein FliQ
translation: MTPEAVMTLGFDAMKVGLALSTPPLLAAMVTGLLVSLLQASTQINEMTLSFIPKILAVIISLVIAGPWMLSLLLDYVRTLFSQLPYSIV
SIO_010081: SGP1_RS00330
subclass of: SO_0000673
so part of: SGP1_RS00330
location: complement(61407..61676)
location: region:61407-61676:-1
so has part: feature:61407-61676:-1:exon

WP_011409907.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61407-61676:-1:exon

SGP1_RS00335
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: fliP
locus tag: SGP1_RS00335
old locus tag: SG0043
so part of: sequence
location: complement(61695..62465)
location: region:61695-62465:-1
so has part: feature:61695-62465:-1:exon
subclass of: SO_0000010

position:61695:-1
position: 61695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62465:-1
position: 62465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61695-62465:-1:exon

SGP1_RS00335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: fliP
locus tag: SGP1_RS00335
old locus tag: SG0043
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003854468.1
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar type III secretion system pore protein FliP
translation: MRRGPARGVWPLVLLALPLLIILLPFQAAHAAQQGLIQMHPLPDGGQRWSLPVQTLVLLTSLTFLPAALLLMSGFTRIIIVLSILRNALGTPSAPPNQILLGLALCLTFFVMSPVLDSIYRDAYLPFSQDQIDMDTAIERAAQPLRQFMLTQTRETDLSLYARLGKQAAFAGPEQVPMQILLPAFVTSELKTAFQIGFTLFIPFLIIDLVIASVLMALGMMMLPPTTVSLPFKLMLFVMVDGWQLLLGSLAQSFFS
SIO_010081: SGP1_RS00335
subclass of: SO_0000673
so part of: SGP1_RS00335
location: complement(61695..62465)
location: region:61695-62465:-1
so has part: feature:61695-62465:-1:exon

WP_011409908.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61695-62465:-1:exon

SGP1_RS00340
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: fliO
locus tag: SGP1_RS00340
old locus tag: SG0044
so part of: sequence
location: complement(62495..62869)
location: region:62495-62869:-1
so has part: feature:62495-62869:-1:exon
subclass of: SO_0000010

position:62495:-1
position: 62495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62869:-1
position: 62869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62495-62869:-1:exon

SGP1_RS00340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: fliO
locus tag: SGP1_RS00340
old locus tag: SG0044
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015871716.1
GO process: GO:0044781 - bacterial-type flagellum organization [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar biosynthetic protein FliO
translation: MKQTTLQPPVAHDSGHGTVLFNVAGSLGAVLLLILVLLKLARRFGFSAPRHGGQPLLKVRAGCSLGNRERVVVVEAGEHWLVLGVTPGRITHLHTLPAGDDAPDEPPPTFRTLLARERQSRETT
SIO_010081: SGP1_RS00340
subclass of: SO_0000673
so part of: SGP1_RS00340
location: complement(62495..62869)
location: region:62495-62869:-1
so has part: feature:62495-62869:-1:exon

WP_011409909.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62495-62869:-1:exon

SGP1_RS00345
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: fliN
locus tag: SGP1_RS00345
old locus tag: SG0045
so part of: sequence
location: complement(62870..63274)
location: region:62870-63274:-1
so has part: feature:62870-63274:-1:exon
subclass of: SO_0000010

position:62870:-1
position: 62870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63274:-1
position: 63274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62870-63274:-1:exon

SGP1_RS00345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: fliN
locus tag: SGP1_RS00345
old locus tag: SG0045
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004173118.1
GO component: GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO function: GO:0003774 - cytoskeletal motor activity [Evidence IEA]
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar motor switch protein FliN
translation: MSDTPHTPGDEAPLHETDGQSLGDTACPAPSRPEFPPASTTEGGSPLTEDLSLILDIPVKMTVELGRTRMTIRELLHLSQDAVVPLEGQAGEPLDILINGYLIARGEVVVMGEQYGVRIADIVTPAERMRRLSR
SIO_010081: SGP1_RS00345
subclass of: SO_0000673
so part of: SGP1_RS00345
location: complement(62870..63274)
location: region:62870-63274:-1
so has part: feature:62870-63274:-1:exon

WP_011409910.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62870-63274:-1:exon

SGP1_RS00350
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: fliM
locus tag: SGP1_RS00350
old locus tag: SG0046
so part of: sequence
location: complement(63267..64280)
location: region:63267-64280:-1
so has part: feature:63267-64280:-1:exon
subclass of: SO_0000010

position:63267:-1
position: 63267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64280:-1
position: 64280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63267-64280:-1:exon

SGP1_RS00350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: fliM
locus tag: SGP1_RS00350
old locus tag: SG0046
inference: COORDINATES: protein motif:HMM:TIGR01397.1
GO component: GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar motor switch protein FliM
translation: MSEKDSARPAPLTRKQAKKELRQAQARAAQQPSPKTGSGSPFDAAQRRRQGGERLKGLEMINQDFAGRFRSALFILMQRRTDISAEAILIQPYREFAAQLRPPASLNLIDLKPLRGNTLFAFTPGLIFTTLDTLFGGSGRLPDAQERAFTPAEQRVIDRLLKLMLQAYGDAWLGLHPLEPEFITAETSCRFTGFSDGEMVVISPFRVAIGAMQGEFAIVFSQAALEPLYEILSKPLPEHIRQDQGHWRQNLARQLQGTELELVARFADLPLCLSRVMELRRGDILPIPRPDRLTACVDGVPVFLGNYGSLNGRYALRVEHVINQGIDQLNNKDIPHE
SIO_010081: SGP1_RS00350
subclass of: SO_0000673
so part of: SGP1_RS00350
location: complement(63267..64280)
location: region:63267-64280:-1
so has part: feature:63267-64280:-1:exon

WP_041866482.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63267-64280:-1:exon

SGP1_RS00355
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00355
old locus tag: SG0047
so part of: sequence
location: complement(64286..64795)
location: region:64286-64795:-1
so has part: feature:64286-64795:-1:exon
subclass of: SO_0000010

position:64286:-1
position: 64286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64795:-1
position: 64795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64286-64795:-1:exon

SGP1_RS00355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00355
old locus tag: SG0047
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014353858.1
GO component: GO:0009425 - bacterial-type flagellum basal body [Evidence IEA]
GO process: GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]; GO:0006935 - chemotaxis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar basal body-associated FliL family protein
translation: MATGAKDVSGIKAFFIKYRSAAVIILGTITVLALGLLVYLQPGIKEDAIPVAQTVDSLPAENTLPPVYFPLDAFTVSLQPDNGDYGAMLYVGLTLRLQDEKTRALMESQLPELRNYLILLLSQQSPASISSAADKQALLTQIKQELNQQRPNGQPPYVTDVFFNSFIVR
SIO_010081: SGP1_RS00355
subclass of: SO_0000673
so part of: SGP1_RS00355
location: complement(64286..64795)
location: region:64286-64795:-1
so has part: feature:64286-64795:-1:exon

WP_243466134.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64286-64795:-1:exon

SGP1_RS22790
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS22790
old locus tag: SG0048
so part of: sequence
location: complement(64908..66026)
location: region:64908-66026:-1
so has part: feature:64908-66026:-1:exon
subclass of: SO_0000010

position:64908:-1
position: 64908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66026:-1
position: 66026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64908-66026:-1:exon

SGP1_RS22790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS22790
old locus tag: SG0048
inference: COORDINATES: protein motif:HMM:NF014207.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar hook-length control protein FliK
translation: MIPTASMIIRDRGPIITTAAATELHQSEFADALQQYLAGTRRQDVGADSPVADPDPKASLTQRCKALAALINQRLAEGDHALDDDELQHLQALLAQFVLQQWPADGDPVLAKLTITPGSAHRLADGAAQTPGVQDRQPLLILPPAAKRTAKCAENPLPRLVYGNGQAEVALTRVRGNVPSHTTAHSDSLAATATLAPAGPSSTLLAAVTTDPAPLPAQTPPPAATAHLRQPLGSPAWQQHLGEHIMLFNRYSIFHAQLHLHPQELGAVKVNLRLSQEQLQVHFASDNQQVRSVLETAMTQLRTSLAENGIALGDTSVGTETSGHETAGQQQGQGESPKHGRTRSDLLLVAQHNDSVAVGSGTGYRGGIDIYA
SIO_010081: SGP1_RS22790
subclass of: SO_0000673
so part of: SGP1_RS22790
location: complement(64908..66026)
location: region:64908-66026:-1
so has part: feature:64908-66026:-1:exon

WP_011409913.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64908-66026:-1:exon

SGP1_RS00365
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: fliJ
locus tag: SGP1_RS00365
old locus tag: SG0049
so part of: sequence
location: complement(66023..66472)
location: region:66023-66472:-1
so has part: feature:66023-66472:-1:exon
subclass of: SO_0000010

position:66023:-1
position: 66023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66472:-1
position: 66472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66023-66472:-1:exon

SGP1_RS00365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: fliJ
locus tag: SGP1_RS00365
old locus tag: SG0049
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017375280.1
GO component: GO:0009288 - bacterial-type flagellum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO function: GO:0003774 - cytoskeletal motor activity [Evidence IEA]
GO process: GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]; GO:0006935 - chemotaxis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar export protein FliJ
translation: MTSTSPIETLREHAERALEEALLQLGACRSAHASAVAQLNQLMSYEQEYRKQLEDNMTGTGLNVDKWINYQSFIASLYKIVAHHSQQVSVFQSRVDLAVAQWHQKKQRLNAFEILKTRSETARQLRENRRSQKQMDEFALRASLRRVES
SIO_010081: SGP1_RS00365
subclass of: SO_0000673
so part of: SGP1_RS00365
location: complement(66023..66472)
location: region:66023-66472:-1
so has part: feature:66023-66472:-1:exon

WP_011409914.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66023-66472:-1:exon

SGP1_RS00370
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: fliI
locus tag: SGP1_RS00370
old locus tag: SG0050
so part of: sequence
location: complement(66483..67859)
location: region:66483-67859:-1
so has part: feature:66483-67859:-1:exon
subclass of: SO_0000010

position:66483:-1
position: 66483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67859:-1
position: 67859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66483-67859:-1:exon

SGP1_RS00370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: fliI
locus tag: SGP1_RS00370
old locus tag: SG0050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011055587.1
GO component: GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar protein export ATPase FliI
translation: MTVQLERWINAMARQERMITTLPDCRHYGRLTRTTGMVMEAVGLQLPLGATCLIERYNGKAVGLVETEVVGFKGRQLFLMPLENVEGILPSARVYAPGSANSKVPARLLPLGPALLGRVLCGSGQPLDNLPPPETGYRASLYSPPLNPLARSPITDVLDVGVRAINGLLTVGRGQRMGLFAGSGVGKSMLLGMMARYTQADVIVVGLIGERGREVKDFIENILGEEGIARAVIIAAPADVSPMLRMQGAAYATRIAEDFRDRGKHVLLIMDSLTRYAMAQREIGLAIGEPPATKGYPPSVFAKLPTLVERAGNGADGGGSITAFYTVLTEGDDQQDPIADAARAILDGHVVLSRQLAESGHYPAIDIETSISRAMTALVDTAHFQQVQQVKQWLASYQRNRDLLSVGAYAAGSDPLLDQAIAHYPQLESYLRQDVSQPCSYTQSCQQLSDLLIPPSTA
SIO_010081: SGP1_RS00370
subclass of: SO_0000673
so part of: SGP1_RS00370
location: complement(66483..67859)
location: region:66483-67859:-1
so has part: feature:66483-67859:-1:exon

WP_011409915.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66483-67859:-1:exon

SGP1_RS00375
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: fliH
locus tag: SGP1_RS00375
old locus tag: SG0051
so part of: sequence
location: complement(67831..68544)
location: region:67831-68544:-1
so has part: feature:67831-68544:-1:exon
subclass of: SO_0000010

position:67831:-1
position: 67831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68544:-1
position: 68544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67831-68544:-1:exon

SGP1_RS00375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: fliH
locus tag: SGP1_RS00375
old locus tag: SG0051
inference: COORDINATES: protein motif:HMM:NF004266.1
GO component: GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO function: GO:0003774 - cytoskeletal motor activity [Evidence IEA]
GO process: GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar assembly protein FliH
translation: MSERAEIARWQRWLPADLALAFTESLPAPLASGDQDDNAWQAELTLLRSQAEQRGFKQGQQEGEKQGYRQGFDQGRSAGFDQGLQDAQAEQGQITAQLADLLRELKATLSGLDAVMPARLTQIALTAAGKILGQSPVCDTRVVLETIQQLLHERPLFDGDLRLYVHPDDLPSLQRHLGSMLESQGWRLLADGQLMRGGCRIIAEDGEVDATLETRWQQLCQMLKEGLPHDRAVGTLD
SIO_010081: SGP1_RS00375
subclass of: SO_0000673
so part of: SGP1_RS00375
location: complement(67831..68544)
location: region:67831-68544:-1
so has part: feature:67831-68544:-1:exon

WP_011409916.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67831-68544:-1:exon

SGP1_RS00380
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: fliG
locus tag: SGP1_RS00380
old locus tag: SG0052
so part of: sequence
location: complement(68537..69526)
location: region:68537-69526:-1
so has part: feature:68537-69526:-1:exon
subclass of: SO_0000010

position:68537:-1
position: 68537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69526:-1
position: 69526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68537-69526:-1:exon

SGP1_RS00380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: fliG
locus tag: SGP1_RS00380
old locus tag: SG0052
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014353862.1
GO component: GO:0009433 - bacterial-type flagellum basal body, C ring [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0006935 - chemotaxis [Evidence IEA]; GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar motor switch protein FliG
translation: MNAIEKSAVVMLTLGEEAAAAVFKHLRKQEVEAIGKTMASLGIYSRQQLTSVLDAFHSDAETMISPEKDSYDYLRAALISALGEDRALLLLEELHITSADDDKGIDALNSMKPQAVAALIQAEHPQVIAAILVLLKRSLAAEILSGLEETLRNDILVRIATLDGLQPAALQELTLALNDLLRGQRSRQGNKGGVRPAAEILNYMQSRQEEAAIDAVRAFDESLAEKIVDQMFMFDDLQDLDDRSLRRILQEIDTDVLVIALKGCAPPLVERILGNMSQRQAEILRDDLNLSAPVKLSRVESERKAILAVVRRLADADEIVINKDGENYV
SIO_010081: SGP1_RS00380
subclass of: SO_0000673
so part of: SGP1_RS00380
location: complement(68537..69526)
location: region:68537-69526:-1
so has part: feature:68537-69526:-1:exon

WP_011409917.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68537-69526:-1:exon

SGP1_RS00385
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: fliF
locus tag: SGP1_RS00385
old locus tag: SG0053
so part of: sequence
location: complement(69523..71229)
location: region:69523-71229:-1
so has part: feature:69523-71229:-1:exon
subclass of: SO_0000010

position:69523:-1
position: 69523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71229:-1
position: 71229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69523-71229:-1:exon

SGP1_RS00385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: fliF
locus tag: SGP1_RS00385
old locus tag: SG0053
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014353863.1
GO component: GO:0009431 - bacterial-type flagellum basal body, MS ring [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar basal-body MS-ring/collar protein FliF
translation: MNASAMDINAKSAISLTNLIARFRDHPKYMLLAASAAGIALAIVLLLWARTPDYRILYSNISDQDGGAVVAELTTMNIPYRFAGNSDAIMVPSDRVHETRLLLAQKGLPKGGALGFELLDREKFGMSQFSEQINYQRALEGEIARTIKTLNPVKSARVHIAMPKPSLFVREHKPATASVTLTLYPGRALDTGQIQAITWLVSGTVPDLPAGNITMVDSQGQLLAQPGNNELDLSTTQLAYTREVEGDFQRRISAILAPVIGAANVRAEVTAQLDFTAVEQTAEQHKPNGRPEEMAIRSQQLSASDQIGIQAPGGVPGALSNQPTPPATASIESPANAAAGKKPASKDSVPPPAAAAPIVQPPRSSQNEKTINYEVDRTLTHSRFRPGVIKRLSGAVVVNDREDSNGNRVHLTPQEMQDVTALVREAMGFSSERGDTLNIVNTRFVANQDIMPPLPFWQDPGLQSIAFSLLRYALVALLFWLAWRKGLRPLWQRQQEIERERIRAQYEASQPRDEPRPISRSELEKETREKARQAMEDSIRQLRDVAAARPQMVARILRQWITREQQPS
SIO_010081: SGP1_RS00385
subclass of: SO_0000673
so part of: SGP1_RS00385
location: complement(69523..71229)
location: region:69523-71229:-1
so has part: feature:69523-71229:-1:exon

WP_011409918.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69523-71229:-1:exon

SGP1_RS00390
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: fliE
locus tag: SGP1_RS00390
old locus tag: SG0054
so part of: sequence
location: 71471..71794
location: region:71471-71794:1
so has part: feature:71471-71794:1:exon
subclass of: SO_0000010

position:71471:1
position: 71471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71794:1
position: 71794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71471-71794:1:exon

SGP1_RS00390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: fliE
locus tag: SGP1_RS00390
old locus tag: SG0054
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005160376.1
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar hook-basal body complex protein FliE
translation: MTTQAIHSVLAMMNITAEQAAGNTLTLSAPATAGAGFMSELNSSIKQINGMQIEARRKAEKFELGVPGIALNDVMVDMQKASLALHLGIQVNNKLINAYQEVMNMAV
SIO_010081: SGP1_RS00390
subclass of: SO_0000673
so part of: SGP1_RS00390
location: 71471..71794
location: region:71471-71794:1
so has part: feature:71471-71794:1:exon

WP_011409919.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71471-71794:1:exon

SGP1_RS00395
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00395
old locus tag: SG0055
so part of: sequence
location: complement(71863..72204)
location: region:71863-72204:-1
so has part: feature:71863-72204:-1:exon
subclass of: SO_0000010

position:71863:-1
position: 71863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72204:-1
position: 72204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71863-72204:-1:exon

SGP1_RS00395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00395
old locus tag: SG0055
inference: COORDINATES: protein motif:HMM:NF017237.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar protein FliT
translation: MQIISQAEHPFSLPLQLSYQIIAKARLKDWDSVVALNNRYVITLREAIEHIQSAGMATYEEEGRMNDIEQLLKNEKEIRALIGTRLTTLEQDMGQLRHSSQGNNTYHRQLLQS
SIO_010081: SGP1_RS00395
subclass of: SO_0000673
so part of: SGP1_RS00395
location: complement(71863..72204)
location: region:71863-72204:-1
so has part: feature:71863-72204:-1:exon

WP_011409920.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71863-72204:-1:exon

SGP1_RS00400
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: fliS
locus tag: SGP1_RS00400
old locus tag: SG0056
so part of: sequence
location: complement(72218..72607)
location: region:72218-72607:-1
so has part: feature:72218-72607:-1:exon
subclass of: SO_0000010

position:72218:-1
position: 72218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72607:-1
position: 72607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72218-72607:-1:exon

SGP1_RS00400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: fliS
locus tag: SGP1_RS00400
old locus tag: SG0056
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020454847.1
GO component: GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar export chaperone FliS
translation: MSVDQGINAYQQISLQTSIAGATPHQLIVMLFDGAHGALARAGIWMARGNIARRGEEISRAIAIIEGGLLATLDYEKGKTLAEDLASLYRYMIRTLLQANLHNDPEAIKYVDALLKNVSSAWKEITPAR
SIO_010081: SGP1_RS00400
subclass of: SO_0000673
so part of: SGP1_RS00400
location: complement(72218..72607)
location: region:72218-72607:-1
so has part: feature:72218-72607:-1:exon

WP_011409921.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72218-72607:-1:exon

SGP1_RS00405
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: fliD
locus tag: SGP1_RS00405
old locus tag: SG0057
so part of: sequence
location: complement(72688..74373)
location: region:72688-74373:-1
so has part: feature:72688-74373:-1:exon
subclass of: SO_0000010

position:72688:-1
position: 72688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74373:-1
position: 74373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72688-74373:-1:exon

SGP1_RS00405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: fliD
locus tag: SGP1_RS00405
old locus tag: SG0057
inference: COORDINATES: protein motif:HMM:NF018852.2
GO component: GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO process: GO:0007155 - cell adhesion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar filament capping protein FliD
translation: MIGRINFSRSWRRYYCDTGQICVSLSFTRSILVSPHALPKGSYFFILVLLGQLNFSSSRPIAMHTIHLMNNGRVSMGGISVTGISDSLMEMQAKKNTLLLQPYQLRQKNIESKISAWGKIRSSLQTLLEKSNALKNDAFYAMKMSENKAFSASASSGAMAGTHNIRVSQLAHNHTLSLTMEKGIDTPLGNSAATRNLKISQKGENGQIKETVISLAQEETSLAGIAKSINGKNAGIRAEVKSVDNEGTQRLILRAQDSGSAGEMALSVEGDTTLAAIMNYTTPPEEPGDSTDSGEVSEKIKQDLPATDAIIWVDGNKYTRSSNTINDILTGVTLTLKQTSKDDESEALTLSPDESAVQEAVEEFVTAFNDYITQSSSLSKFTTANYSNLKTDTVALPDATNGPLAGESLLTDLQALLRRDAGSNYGNDDVTSIADLGIKVDAKTGKLELDSTKLKNKIHTNPEEVQRLFLGTEEKPGLAGVMSDHIKGYVGRDGKGNIIKDETEKLEKDKKEAKKQLERTEATIEARMRAFQKQYQQMEVAITKLQSLQGSLSAIQTLSKN
SIO_010081: SGP1_RS00405
subclass of: SO_0000673
so part of: SGP1_RS00405
location: complement(72688..74373)
location: region:72688-74373:-1
so has part: feature:72688-74373:-1:exon

WP_148203310.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72688-74373:-1:exon

SGP1_RS00410
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00410
old locus tag: SG0058
so part of: sequence
location: 74875..76134
location: region:74875-76134:1
so has part: feature:74875-76134:1:exon
subclass of: SO_0000010

position:74875:1
position: 74875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76134:1
position: 76134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74875-76134:1:exon

SGP1_RS00410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00410
old locus tag: SG0058
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014353867.1
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FliC/FljB family flagellin
translation: MSQVINTNILSITAQNNLNKSQNSLSTAIQRLSSGLRINSAKDDAAGQAISNRFTSLINGLTQASRNANDGIAVAQTAEGAINEINENLQAIRRLTVQVKSTASISDADKKSIQDEIGKRLEEIDRIAEQTEFNGIRILSEDQKLAIQVGANDGQIIDIDLFNMGIEKLGMEGFNVDDGVSVPGKLGSEIKTFTGEVAPSLKGETEEVNKTDKKIYFQDGIYYTKSATKDEYYKVERKGQTSQFEITKAENGIELTSPDTVEKIEATDPVTGLAKGESLYNYTDEKGATTYAIKGQDASGKDVYYAAKYDALTGKATKEGVISTGKDATEDPLKTIDKAIAIVDGARGALGATQNRLGSVINSLSTTVANLSQSRSNIEDADFATEVSNMNRANILQQAGTAVLAQANAVPQGILKLLS
SIO_010081: SGP1_RS00410
subclass of: SO_0000673
so part of: SGP1_RS00410
location: 74875..76134
location: region:74875-76134:1
so has part: feature:74875-76134:1:exon

WP_011409923.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74875-76134:1:exon

SGP1_RS00415
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00415
old locus tag: SG0059
so part of: sequence
location: 76289..77014
location: region:76289-77014:1
so has part: feature:76289-77014:1:exon
subclass of: SO_0000010

position:76289:1
position: 76289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77014:1
position: 77014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76289-77014:1:exon

SGP1_RS00415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00415
old locus tag: SG0059
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005127740.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO process: GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA polymerase sigma factor FliA
translation: MDVIYNHQGRLADDRGLWQQYAPIIRHEALRLQVRLPASVELEDLIQAGMIGLLAAIDSFDAAQGASFTTYARSRIRWGMLDELRERDWVPRSVRRNAREIAAAIQRLEQRLGANTSEQQIADELGVSLTAYQTMLHETNCSQLFSLDELMAQEAQGTGPALPADAGQDPFQLLMAGGLRKQVKDEIGRLPEREQLLLNLYYHQELNLKEIGEVLGVGESRVSQLHSLAIKRLRARLQGST
SIO_010081: SGP1_RS00415
subclass of: SO_0000673
so part of: SGP1_RS00415
location: 76289..77014
location: region:76289-77014:1
so has part: feature:76289-77014:1:exon

WP_011409924.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76289-77014:1:exon

SGP1_RS00420
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00420
old locus tag: SG0060
so part of: sequence
location: 77593..79200
location: region:77593-79200:1
so has part: feature:77593-79200:1:exon
subclass of: SO_0000010

position:77593:1
position: 77593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79200:1
position: 79200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77593-79200:1:exon

SGP1_RS00420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00420
old locus tag: SG0060
inference: COORDINATES: similar to AA sequence:RefSeq:NP_462532.1
GO component: GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MTISLTKSGILKVGISLAALAVAASVQAKTLVYCSEGSPEGFNPQLFTSGTTFDASSVPIYNRLVEFKLGTTEVTPSLAEKWDVSDDGKVYTFHLRHGVKWQDSKDFKPSRDFNADDVIFSFTRQKDANAPYHKVSGGRYEYFNGMGMGDLIANIEKVDAYTVRFTLIRQEAPFVADLAMDFASILSAEYADKMMKAGTPEKLDLNPIGTGPFQLLQYQKDSRILYKSFPGYWGTKPKIDRLVFSITPDASVRYAKMQKNECQVMPYPNPADIARMKQDSTINLMEQPGLNVGYLAYNVEKKPLDNVKVRQALTLAVNKKAIIDAVYQGAGQAAKNLIPPTMWSYNDAVQYYPYDPAKAKELLKEVGMADGFSIDLWAMPVQRPYNPNARRMAELIQADWAKIGVKANIVTYEWGEYLKRAKAGEHQTVMMGWNGDNGDPDNFFATLFSCDAAKQGSNYSKWCSKPFEDLIQPARSESDHAKRIDLYKQAQVVMHDEAPALIIAHSTVYEPVRKEVKGYVVDPLGKHHFDNVSLD
SIO_010081: SGP1_RS00420
subclass of: SO_0000673
so part of: SGP1_RS00420
location: 77593..79200
location: region:77593-79200:1
so has part: feature:77593-79200:1:exon

WP_011409925.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77593-79200:1:exon

SGP1_RS00425
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: dppB
locus tag: SGP1_RS00425
old locus tag: SG0061
so part of: sequence
location: 79401..80420
location: region:79401-80420:1
so has part: feature:79401-80420:1:exon
subclass of: SO_0000010

position:79401:1
position: 79401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80420:1
position: 80420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79401-80420:1:exon

SGP1_RS00425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: dppB
locus tag: SGP1_RS00425
old locus tag: SG0061
EC number: 7.4.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dipeptide ABC transporter permease DppB
translation: MLQFILRRLGLVIPTFIGITLLTFAFVHLIPGDPVLIMAGERGISPERHAELMEQMGLDKPLFQQYFHYIAGVLQGDLGTSLKSRLPVWQEFVPRFQATLELGVCAMIFAVLVGIPVGVLAAVKRGSIFDHTAVGISLTGYSMPIFWWGMMLIMLVSVHLNLTPVSGRVGDTVFLDDSQPLTGFMLIDTLIWGEPGDFKDAVMHIILPAIVLGTIPLAVIVRMTRSAMLEVLSEDYIRTARAKGLSRLRVIVVHALRNALLSVVTVIGLQVGTLLAGAILTETIFSWPGIGRWLIEALQRRDYPVVQGGVLLVATLIILVNLLVDLLYGVVNPRIRHKK
SIO_010081: SGP1_RS00425
subclass of: SO_0000673
so part of: SGP1_RS00425
location: 79401..80420
location: region:79401-80420:1
so has part: feature:79401-80420:1:exon

WP_011409926.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79401-80420:1:exon

SGP1_RS00430
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: dppC
locus tag: SGP1_RS00430
old locus tag: SG0062
so part of: sequence
location: 80432..81337
location: region:80432-81337:1
so has part: feature:80432-81337:1:exon
subclass of: SO_0000010

position:80432:1
position: 80432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81337:1
position: 81337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80432-81337:1:exon

SGP1_RS00430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: dppC
locus tag: SGP1_RS00430
old locus tag: SG0062
EC number: 7.4.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010281086.1
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dipeptide ABC transporter permease DppC
translation: MTQVTEPVTLTGAPKPMTSLQEFWHYFKRNKGAVIGLAYILLMFIVAAGAGILAPHGPAEQFRDALLRPPVWMEGGSWQFMLGTDDVGRDILSRLMYGARLSLLVGCLVVALSLLLGVIFGLLAGYLGGMVDIIIMRVVDIMLALPSLLLALVLVAIFGPSIVNASLALTFVALPHYVRLTRASVLGEVNRDYTIASRVAGAGTLRQMFVNILPNCLAPLIVQASLGFSNAILDMAALGFLGMGAQPPTPEWGTMLADVLQFAQSAWWVVAFSGFVILLTVLAFNLMGDGLRDALDPKLKQ
SIO_010081: SGP1_RS00430
subclass of: SO_0000673
so part of: SGP1_RS00430
location: 80432..81337
location: region:80432-81337:1
so has part: feature:80432-81337:1:exon

WP_011409927.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80432-81337:1:exon

SGP1_RS00435
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: dppD
locus tag: SGP1_RS00435
old locus tag: SG0063
so part of: sequence
location: 81348..82328
location: region:81348-82328:1
so has part: feature:81348-82328:1:exon
subclass of: SO_0000010

position:81348:1
position: 81348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82328:1
position: 82328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81348-82328:1:exon

SGP1_RS00435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: dppD
locus tag: SGP1_RS00435
old locus tag: SG0063
EC number: 7.4.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:NP_462529.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO process: GO:0015833 - peptide transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dipeptide ABC transporter ATP-binding protein
translation: MALLTIDKLSVHFGDEGTPFRAVDRISYQAEQGHVLGIVGESGSGKSVSSLAVMGLIDYPGKVMADNLAFNGRDLQKISDNERRQLIGADMAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNRRTRRQRAIDLLTLVGIPDPASRLDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLDLQQRENMALVLITHDLALVAEVAHHIIVMYAGQVVETGKATEIFRAPRHPYTQALQRALPEFAADKARLASLPGTVPGKYDRPSGCLLNPRCPYATDHCRQSEPALHTLPDRQSKCHYPLDDAGRPTR
SIO_010081: SGP1_RS00435
subclass of: SO_0000673
so part of: SGP1_RS00435
location: 81348..82328
location: region:81348-82328:1
so has part: feature:81348-82328:1:exon

WP_011409928.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81348-82328:1:exon

SGP1_RS00440
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00440
old locus tag: SG0064
so part of: sequence
location: 82325..83335
location: region:82325-83335:1
so has part: feature:82325-83335:1:exon
subclass of: SO_0000010

position:82325:1
position: 82325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83335:1
position: 83335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82325-83335:1:exon

SGP1_RS00440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00440
old locus tag: SG0064
EC number: 7.4.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004699572.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO process: GO:0015833 - peptide transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide ABC transporter ATP-binding protein
translation: MSEIVIDNRSTSLLHAVDLKKYYPVKKGLFAEEKLVKALDGVSFTMERGKTLAVVGESGCGKSTLGRLLTMIETPSGGELYYLGQDLLKPDRTAEHLRRQKIQIVFQNPYGSLNPRKKVGQILEEPLQINTDLSRAERREKALAMMAKVGLKTEHYDRYPHMFSGGQRQRIAIARGLMLDPDVVIADEPVSALDVSVRAQVLNLMMDLQQEMGLSYVFISHDLSVVEHIADDVIVMYLGRCVEKGSKEAIFNNPRHPYTQALLSATPRLNPDLRRERIKLTGELPSPLNPPPGCAFNARCRRRFGSCTVLQPQLKGYGEQLVACFAVDQDEAQPAR
SIO_010081: SGP1_RS00440
subclass of: SO_0000673
so part of: SGP1_RS00440
location: 82325..83335
location: region:82325-83335:1
so has part: feature:82325-83335:1:exon

WP_011409929.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82325-83335:1:exon

SGP1_RS00450
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00450
old locus tag: SG0065
so part of: sequence
location: complement(84328..84642)
location: region:84328-84642:-1
so has part: feature:84328-84642:-1:exon
subclass of: SO_0000010

position:84328:-1
position: 84328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84642:-1
position: 84642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84328-84642:-1:exon

SGP1_RS00450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00450
old locus tag: SG0065
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: PAS domain-containing protein
translation: MDNHENGIKAYLKSPQSLILFIKNSSDHWLIKDHEARYVFVNESASDFFRFSKRFNAEGKSDKDVQTDICQELWPEFIESDQKAIKENKKIISIAIHHYVKGNM
SIO_010081: SGP1_RS00450
subclass of: SO_0000673
so part of: SGP1_RS00450
location: complement(84328..84642)
location: region:84328-84642:-1
so has part: feature:84328-84642:-1:exon

WP_011409930.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84328-84642:-1:exon

SGP1_RS25335
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS25335
pseudo: true
so part of: sequence
location: complement(85185..88287)
location: region:85185-88287:-1
so has part: feature:85185-88287:-1:exon
subclass of: SO_0000010

position:85185:-1
position: 85185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88287:-1
position: 88287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85185-88287:-1:exon

SGP1_RS25335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS25335
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014333395.1
GO component: GO:0019867 - outer membrane [Evidence IEA]
GO process: GO:0030244 - cellulose biosynthetic process [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: cellulose synthase subunit BcsC-related outer membrane protein
SIO_010081: SGP1_RS25335
subclass of: SO_0000673
so part of: SGP1_RS25335
location: complement(85185..88287)
location: region:85185-88287:-1
so has part: feature:85185-88287:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:85185-88287:-1:exon

SGP1_RS28825
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS28825
so part of: sequence
location: complement(88373..88738)
location: region:88373-88738:-1
so has part: feature:88373-88738:-1:exon
subclass of: SO_0000010

position:88373:-1
position: 88373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88738:-1
position: 88738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88373-88738:-1:exon

SGP1_RS28825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS28825
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSFESPWTAKRVVVLVTATNDDQLVRLNQDLQSAAINAGIRGDVAIINNENGVRSFSVGALFPRGEMPWYMQVLWYTNQHIILLAVCGLLFSLLIVNGIYLLLARHAAKWLAHSANNKQGH
SIO_010081: SGP1_RS28825
subclass of: SO_0000673
so part of: SGP1_RS28825
location: complement(88373..88738)
location: region:88373-88738:-1
so has part: feature:88373-88738:-1:exon

WP_148203311.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88373-88738:-1:exon

SGP1_RS28830
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS28830
so part of: sequence
location: complement(88748..89101)
location: region:88748-89101:-1
so has part: feature:88748-89101:-1:exon
subclass of: SO_0000010

position:88748:-1
position: 88748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89101:-1
position: 89101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88748-89101:-1:exon

SGP1_RS28830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS28830
inference: COORDINATES: protein motif:HMM:NF015149.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0006011 - UDP-glucose metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB
translation: MLLPAKPQAAELATLMAMAARAGNATGITLNRVTVRFGLPNGASEDEQLAGKDILAVASLKQAAFVQPLAAKSRFALRNGLLSVRERRLTDRLNNYLNGHLFSHDREADRYLTSTDA
SIO_010081: SGP1_RS28830
subclass of: SO_0000673
so part of: SGP1_RS28830
location: complement(88748..89101)
location: region:88748-89101:-1
so has part: feature:88748-89101:-1:exon

WP_050747282.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88748-89101:-1:exon

SGP1_RS32260
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS32260
pseudo: true
so part of: sequence
location: complement(89122..90504)
location: region:89122-90504:-1
so has part: feature:89122-90504:-1:exon
subclass of: SO_0000010

position:89122:-1
position: 89122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90504:-1
position: 90504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89122-90504:-1:exon

SGP1_RS32260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS32260
inference: COORDINATES: protein motif:HMM:NF015149.2
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB
SIO_010081: SGP1_RS32260
subclass of: SO_0000673
so part of: SGP1_RS32260
location: complement(89122..90504)
location: region:89122-90504:-1
so has part: feature:89122-90504:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:89122-90504:-1:exon

SGP1_RS26090
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: bcsA
locus tag: SGP1_RS26090
pseudo: true
so part of: sequence
location: complement(<90922..92886)
location: region:90922-92886:-1
so has part: feature:90922-92886:-1:exon
subclass of: SO_0000010

position:90922:-1
position: 90922
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:92886:-1
position: 92886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90922-92886:-1:exon

SGP1_RS26090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: bcsA
locus tag: SGP1_RS26090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004106724.1
GO function: GO:0016759 - cellulose synthase activity [Evidence IEA]; GO:0035438 - cyclic-di-GMP binding [Evidence IEA]
GO process: GO:0030244 - cellulose biosynthetic process [Evidence IEA]; GO:0006011 - UDP-glucose metabolic process [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: UDP-forming cellulose synthase catalytic subunit
SIO_010081: SGP1_RS26090
subclass of: SO_0000673
so part of: SGP1_RS26090
location: complement(<90922..92886)
location: region:90922-92886:-1
so has part: feature:90922-92886:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:90922-92886:-1:exon

SGP1_RS00470
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: bcsQ
locus tag: SGP1_RS00470
pseudo: true
so part of: sequence
location: complement(92906..93675)
location: region:92906-93675:-1
so has part: feature:92906-93675:-1:exon
subclass of: SO_0000010

position:92906:-1
position: 92906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93675:-1
position: 93675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92906-93675:-1:exon

SGP1_RS00470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: bcsQ
locus tag: SGP1_RS00470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014539884.1
GO process: GO:0090540 - bacterial cellulose biosynthetic process [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: cellulose biosynthesis protein BcsQ
SIO_010081: SGP1_RS00470
subclass of: SO_0000673
so part of: SGP1_RS00470
location: complement(92906..93675)
location: region:92906-93675:-1
so has part: feature:92906-93675:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:92906-93675:-1:exon

SGP1_RS00475
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: hmsP
locus tag: SGP1_RS00475
pseudo: true
so part of: sequence
location: 94714..96663
location: region:94714-96663:1
so has part: feature:94714-96663:1:exon
subclass of: SO_0000010

position:94714:1
position: 94714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96663:1
position: 96663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94714-96663:1:exon

SGP1_RS00475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: hmsP
locus tag: SGP1_RS00475
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013507324.1
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: biofilm formation regulator HmsP
SIO_010081: SGP1_RS00475
subclass of: SO_0000673
so part of: SGP1_RS00475
location: 94714..96663
location: region:94714-96663:1
so has part: feature:94714-96663:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:94714-96663:1:exon

SGP1_RS00480
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00480
pseudo: true
so part of: sequence
location: 96922..98410
location: region:96922-98410:1
so has part: feature:96922-98410:1:exon
subclass of: SO_0000010

position:96922:1
position: 96922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98410:1
position: 98410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96922-98410:1:exon

SGP1_RS00480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013359659.1
GO function: GO:0046872 - metal ion binding [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: pitrilysin family protein
SIO_010081: SGP1_RS00480
subclass of: SO_0000673
so part of: SGP1_RS00480
location: 96922..98410
location: region:96922-98410:1
so has part: feature:96922-98410:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:96922-98410:1:exon

SGP1_RS00485
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00485
old locus tag: SG0067
so part of: sequence
location: complement(98463..99404)
location: region:98463-99404:-1
so has part: feature:98463-99404:-1:exon
subclass of: SO_0000010

position:98463:-1
position: 98463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99404:-1
position: 99404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98463-99404:-1:exon

SGP1_RS00485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00485
old locus tag: SG0067
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002440628.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sugar kinase
translation: MTSKKISIIGECMIELSQKGSDVKRGFGGDTLNTSVYLSRLVAASQLKVHYITALGTYSFSDDMLQALQQEGVETSLIQRLENRLPGLYYIETDAHGERTFYYWRNEAAARYWLESASSADICAALADFDYLYLSGISIAILSLQSRKQLLALLRTCRANGGKVIFDNNYRLRLWQSREETQAAYRDILACTDIAFLTLDDEDMMWGEQPVDAVLERTRALGVSEIVIKRGAEACLVAEANEVVQEVHAVKLPKEKVVDTTTAGDSFSAGYLAVRLTGGTATAAAQSGHRTASTVIQYHGAIIPRDACRPGRG
SIO_010081: SGP1_RS00485
subclass of: SO_0000673
so part of: SGP1_RS00485
location: complement(98463..99404)
location: region:98463-99404:-1
so has part: feature:98463-99404:-1:exon

WP_011409932.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:98463-99404:-1:exon

SGP1_RS26095
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS26095
pseudo: true
so part of: sequence
location: <99715..>101100
location: region:99715-101100:1
so has part: feature:99715-101100:1:exon
subclass of: SO_0000010

position:99715:1
position: 99715
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:101100:1
position: 101100
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99715-101100:1:exon

SGP1_RS26095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS26095
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010257389.1
note: internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: AsmA family protein
SIO_010081: SGP1_RS26095
subclass of: SO_0000673
so part of: SGP1_RS26095
location: <99715..>101100
location: region:99715-101100:1
so has part: feature:99715-101100:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:99715-101100:1:exon

SGP1_RS00495
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00495
so part of: sequence
location: complement(101118..101774)
location: region:101118-101774:-1
so has part: feature:101118-101774:-1:exon
subclass of: SO_0000010

position:101118:-1
position: 101118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101774:-1
position: 101774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101118-101774:-1:exon

SGP1_RS00495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00495
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007753843.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CDP-diacylglycerol diphosphatase
translation: MIVILVAALGAWQYYTTSSPKHPDALWRIVSEKCVPNQLQRGDPAPCSEVNTAAGYVVLKDDFVGPLQFLLMPTDKISGIESPRLLATSTPNFFYLAWQARHFLSERRGKAIGDRFLSLAINSAYGRTQNQLHIHISCLRPDIRERLDNNAANISTDWQLLAREVPDTSEEMGEYDMALTPLPDGSLVLLASQRSLLHRNVGSVEEIQDHSCAILNGH
SIO_010081: SGP1_RS00495
subclass of: SO_0000673
so part of: SGP1_RS00495
location: complement(101118..101774)
location: region:101118-101774:-1
so has part: feature:101118-101774:-1:exon

WP_243466135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:101118-101774:-1:exon

SGP1_RS00500
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00500
pseudo: true
so part of: sequence
location: complement(101923..103253)
location: region:101923-103253:-1
so has part: feature:101923-103253:-1:exon
subclass of: SO_0000010

position:101923:-1
position: 101923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103253:-1
position: 103253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101923-103253:-1:exon

SGP1_RS00500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004929985.1
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: MFS transporter
SIO_010081: SGP1_RS00500
subclass of: SO_0000673
so part of: SGP1_RS00500
location: complement(101923..103253)
location: region:101923-103253:-1
so has part: feature:101923-103253:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:101923-103253:-1:exon

SGP1_RS00505
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: yhjD
locus tag: SGP1_RS00505
pseudo: true
so part of: sequence
location: complement(<103700..104362)
location: region:103700-104362:-1
so has part: feature:103700-104362:-1:exon
subclass of: SO_0000010

position:103700:-1
position: 103700
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:104362:-1
position: 104362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103700-104362:-1:exon

SGP1_RS00505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: yhjD
locus tag: SGP1_RS00505
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009087977.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: inner membrane protein YhjD
SIO_010081: SGP1_RS00505
subclass of: SO_0000673
so part of: SGP1_RS00505
location: complement(<103700..104362)
location: region:103700-104362:-1
so has part: feature:103700-104362:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:103700-104362:-1:exon

SGP1_RS00510
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: gorA
locus tag: SGP1_RS00510
old locus tag: SG0068
so part of: sequence
location: complement(104605..105957)
location: region:104605-105957:-1
so has part: feature:104605-105957:-1:exon
subclass of: SO_0000010

position:104605:-1
position: 104605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105957:-1
position: 105957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104605-105957:-1:exon

SGP1_RS00510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: gorA
locus tag: SGP1_RS00510
old locus tag: SG0068
EC number: 1.8.1.7
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005229321.1
GO function: GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0004362 - glutathione-disulfide reductase (NADPH) activity [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
GO process: GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0006749 - glutathione metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutathione-disulfide reductase
translation: MTRHYDYLAIGGGSGGIASINRAAQYGRKCALIEVKYLGGTCVNVGCVPKKVMWHAAQIAEAVKLYAPDYGFSTTVEKFDWRTLIESRNAYINRIHQSYEQVLGNNHVDIIHGFARFVDAHTVEVNGEHITADHILIATGGRPSKVAIPGAEYGIDSDGFFALDAMPERVAVVGAGYIAVEIAGVLNGLGTDTHLFVRKHATLRSFDPLIVETLVEVMQAEGPALHTGSVPRSVAKNPDGSLTLTLQNEEQFTVDALIWAIGREPATDNLNLVAAGVKTDDTGHIQVDKYQNTNVSGIYAVGDNTGAVELTPVAVAAGRRLSERLFNNKPEEHLNYDLIPTVVFSHPPIGAIGLTEPEAKEKYGETEVKVYKTSFTSMYTAVTRHRQLCRMKLVCVGLQEKIVGLHGIGFGMDEMLQGFAVAIKMGATKQDFDNTVAIHPTAAEELVTMR
SIO_010081: SGP1_RS00510
subclass of: SO_0000673
so part of: SGP1_RS00510
location: complement(104605..105957)
location: region:104605-105957:-1
so has part: feature:104605-105957:-1:exon

WP_011409933.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:104605-105957:-1:exon

SGP1_RS00515
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00515
old locus tag: SG0069
so part of: sequence
location: complement(106056..106898)
location: region:106056-106898:-1
so has part: feature:106056-106898:-1:exon
subclass of: SO_0000010

position:106056:-1
position: 106056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106898:-1
position: 106898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106056-106898:-1:exon

SGP1_RS00515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00515
old locus tag: SG0069
EC number: 2.1.1.266
inference: COORDINATES: similar to AA sequence:RefSeq:NP_312398.1
GO function: GO:0008988 - rRNA (adenine-N6-)-methyltransferase activity [Evidence IEA]
GO process: GO:0070475 - rRNA base methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ
translation: MLSYRHSFHAGNHADVLKHTVLSLILSAMKEKEKPFLYLDSHAGAGRYMLSGEKAERTGEFLEAIARIWQRDDVPTLLAPYLDVVRHFNRTGQLRYYPGSPLLARQLLRDEDKLLLTELHASDYPLLRSEFHKDARATVRRADGYQQLKSQLPPASRRGVVLIDPPYEMKTDYQEVVSAIQEGYKRFATGVYALWYPVVLRQQIKRTLSALERSGIRRILQIELAVRPDSDRRGMTASGMIVVNPPWKLEQQMNALLPWLHQTLVPTGQGHAFALWLVPE
SIO_010081: SGP1_RS00515
subclass of: SO_0000673
so part of: SGP1_RS00515
location: complement(106056..106898)
location: region:106056-106898:-1
so has part: feature:106056-106898:-1:exon

WP_011409934.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106056-106898:-1:exon

SGP1_RS26100
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS26100
pseudo: true
so part of: sequence
location: 107125..108012
location: region:107125-108012:1
so has part: feature:107125-108012:1:exon
subclass of: SO_0000010

position:107125:1
position: 107125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108012:1
position: 108012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107125-108012:1:exon

SGP1_RS26100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS26100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5 family transposase
SIO_010081: SGP1_RS26100
subclass of: SO_0000673
so part of: SGP1_RS26100
location: 107125..108012
location: region:107125-108012:1
so has part: feature:107125-108012:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:107125-108012:1:exon

SGP1_RS00530
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00530
old locus tag: SG0071
so part of: sequence
location: 108772..110085
location: region:108772-110085:1
so has part: feature:108772-110085:1:exon
subclass of: SO_0000010

position:108772:1
position: 108772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110085:1
position: 110085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108772-110085:1:exon

SGP1_RS00530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00530
old locus tag: SG0071
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015873863.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytosine permease
translation: MHGAEIHKNDHAYNRVPAASRASLLNATLVRMGVMTSLSQFMVGATLGHSMTFGQAMLATVLGSLILEMVSLGMGLVGMNEGLSTSLLARWCGFGRVGSCLIGIVIALSLIGWFGVQNSVLAEGLVHASQGILNFPVAAILSGLIITLLVLYGFSALSWTAKMSVPLFFLVVLYILYGVVSGADVLNCLNGQPGGPAMSLSEGATMVAGGYIVGALISPDICRYCKNKNHVLFMVTASIIVGEIIINCLSVIVAHALGTADVVTIMTHSAGGIGLVTVILSAIKVNDVNLYSASLGMATALDALTHRKWHYRWLTLLLGLTGTTLSVMGIIAHFIDFLIFLGVLFPPIAGIMLVDYYVLRTHRALLDATRARHALPDVTATPVIGWSAVAAWLGGSAVGLTCQLGIPSLNALLAGCLLYWLMVQAKQRISGRCRSDG
SIO_010081: SGP1_RS00530
subclass of: SO_0000673
so part of: SGP1_RS00530
location: 108772..110085
location: region:108772-110085:1
so has part: feature:108772-110085:1:exon

WP_011409936.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108772-110085:1:exon

SGP1_RS00535
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00535
pseudo: true
so part of: sequence
location: complement(110123..110553)
location: region:110123-110553:-1
so has part: feature:110123-110553:-1:exon
subclass of: SO_0000010

position:110123:-1
position: 110123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110553:-1
position: 110553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110123-110553:-1:exon

SGP1_RS00535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00535
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004851177.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: MarC family protein
SIO_010081: SGP1_RS00535
subclass of: SO_0000673
so part of: SGP1_RS00535
location: complement(110123..110553)
location: region:110123-110553:-1
so has part: feature:110123-110553:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:110123-110553:-1:exon

SGP1_RS32265
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS32265
so part of: sequence
location: 110792..111013
location: region:110792-111013:1
so has part: feature:110792-111013:1:exon
subclass of: SO_0000010

position:110792:1
position: 110792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111013:1
position: 111013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110792-111013:1:exon

SGP1_RS32265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS32265
inference: COORDINATES: protein motif:HMM:NF012512.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyridoxal-phosphate dependent enzyme
translation: MAKFEFVNPFGSVKDRVAFGMFCEAINQHDVNRGPLKLLDASGGNMGKALAKLGQLCGIPIHLIIPESSPPLN
SIO_010081: SGP1_RS32265
subclass of: SO_0000673
so part of: SGP1_RS32265
location: 110792..111013
location: region:110792-111013:1
so has part: feature:110792-111013:1:exon

WP_243466136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110792-111013:1:exon

SGP1_RS34835
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS34835
so part of: sequence
location: 111019..111153
location: region:111019-111153:1
so has part: feature:111019-111153:1:exon
subclass of: SO_0000010

position:111019:1
position: 111019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111153:1
position: 111153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111019-111153:1:exon

SGP1_RS34835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS34835
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MERRFFLLGLISRAQAIGLHDPGWILLSQHLNLVNVEVHQYQAG
SIO_010081: SGP1_RS34835
subclass of: SO_0000673
so part of: SGP1_RS34835
location: 111019..111153
location: region:111019-111153:1
so has part: feature:111019-111153:1:exon

WP_279379424.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111019-111153:1:exon

SGP1_RS32270
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS32270
old locus tag: SG0072
so part of: sequence
location: 111205..111648
location: region:111205-111648:1
so has part: feature:111205-111648:1:exon
subclass of: SO_0000010

position:111205:1
position: 111205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111648:1
position: 111648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111205-111648:1:exon

SGP1_RS32270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS32270
old locus tag: SG0072
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGTGGTLSGFYAALVKDNPALRVLGTTPRELPFGTYDPTNDCDKFGGVGGMGFGFRQPFLAHVGLDDVQFNEVSWRVSLSAMFEFHLLTDIRIGASAAANWSSAYRLAQEMTPAQCVITLFADAGSDAERDRGEQYFHELGALHHPV
SIO_010081: SGP1_RS32270
subclass of: SO_0000673
so part of: SGP1_RS32270
location: 111205..111648
location: region:111205-111648:1
so has part: feature:111205-111648:1:exon

WP_243466137.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111205-111648:1:exon

SGP1_RS32275
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS32275
so part of: sequence
location: complement(112055..112297)
location: region:112055-112297:-1
so has part: feature:112055-112297:-1:exon
subclass of: SO_0000010

position:112055:-1
position: 112055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112297:-1
position: 112297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112055-112297:-1:exon

SGP1_RS32275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS32275
inference: COORDINATES: protein motif:HMM:NF019301.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DoxX family membrane protein
translation: MPAIVAYGVFLGEIIVPLMFIFGILVRPAALIFSFTMLFAWLITEPGIIFTLTNVGSWGLENIAVYLFAGLEHFSSIPVC
SIO_010081: SGP1_RS32275
subclass of: SO_0000673
so part of: SGP1_RS32275
location: complement(112055..112297)
location: region:112055-112297:-1
so has part: feature:112055-112297:-1:exon

WP_243466138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:112055-112297:-1:exon

SGP1_RS00550
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: prlC
locus tag: SGP1_RS00550
old locus tag: SG0073
so part of: sequence
location: 112733..114757
location: region:112733-114757:1
so has part: feature:112733-114757:1:exon
subclass of: SO_0000010

position:112733:1
position: 112733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114757:1
position: 114757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112733-114757:1:exon

SGP1_RS00550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: prlC
locus tag: SGP1_RS00550
old locus tag: SG0073
EC number: 3.4.24.70
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012908236.1
GO function: GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: oligopeptidase A
translation: MTNPLLTSFSLPPFAAIRPEHVVPAVKAALEQCRHTVEEVVAQPGPFTWENLCQPLADADDRLSRIWSPVGHLNAVKNSQKLREAYEQSLPLLSEYSTWVGQHKGLYQAYRNLRDGQHYVQLSVAQKKAVDNALRDFELSGIGLPAEKQQRYGQIVARLSELGSAYSNNVLDATMGWSKLITDEQELVGMPESALAAARAQEGWLLTLDIPSYLPVLTYCDNAALRKELYRAYNTRASDQGPDAGKWDNGPIMSEILALRHELAQLLGFNSYADKSLVTKMAQDPQQVLDFLTDLAKRARPQGEQELAQLRTFAQRHFGRDTLDPWDIAYYGEKQKQHLFSINDEQLRPYFPEPRAVSGLFEVVKRIYGITAKERTDVDTWHPDVRFFDLFDEHGELRGSFYLDLYARDNKRGGAWMDDCVGMMRKAYGELQKPVAYLTCNFNRPISGKPALFTHNEVTTLFHEFGHGLHHMLTRIDTPGVAGISGVPWDAVELPSQFMENYCWQPEALAFISGHYETGEPLPDALLNKLLEAKNYQAALFILRQLEFGLFDFRMHYQYQPEQGARVLDTLAEVKKQVAVLPTVPWGRFPHAFSHIFAGGYAAGYYSYLWADVLAADAWSRFEEEGIFNRDTGESFLDTILSRGGSEEPMVLFARFRGREPQLDAMLRHYGIRE
SIO_010081: SGP1_RS00550
subclass of: SO_0000673
so part of: SGP1_RS00550
location: 112733..114757
location: region:112733-114757:1
so has part: feature:112733-114757:1:exon

WP_011409938.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:112733-114757:1:exon

SGP1_RS26105
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS26105
pseudo: true
so part of: sequence
location: 114763..115108
location: region:114763-115108:1
so has part: feature:114763-115108:1:exon
subclass of: SO_0000010

position:114763:1
position: 114763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115108:1
position: 115108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114763-115108:1:exon

SGP1_RS26105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS26105
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015683790.1
GO function: GO:0008990 - rRNA (guanine-N2-)-methyltransferase activity [Evidence IEA]
GO process: GO:0031167 - rRNA methylation [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
SIO_010081: SGP1_RS26105
subclass of: SO_0000673
so part of: SGP1_RS26105
location: 114763..115108
location: region:114763-115108:1
so has part: feature:114763-115108:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:114763-115108:1:exon

SGP1_RS32280
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS32280
so part of: sequence
location: complement(115069..115347)
location: region:115069-115347:-1
so has part: feature:115069-115347:-1:exon
subclass of: SO_0000010

position:115069:-1
position: 115069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115347:-1
position: 115347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115069-115347:-1:exon

SGP1_RS32280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS32280
inference: COORDINATES: protein motif:HMM:NF014841.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLHYYDPHRLPAVLEEELGLTYHDTPESMVRVCDIVNVQTPLYPTTQGCSAIFKRHAPALSASQGRSLTSRYFLGVFRLQSFLSGGDACDG
SIO_010081: SGP1_RS32280
subclass of: SO_0000673
so part of: SGP1_RS32280
location: complement(115069..115347)
location: region:115069-115347:-1
so has part: feature:115069-115347:-1:exon

WP_243466139.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:115069-115347:-1:exon

SGP1_RS32285
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS32285
so part of: sequence
location: complement(115344..115631)
location: region:115344-115631:-1
so has part: feature:115344-115631:-1:exon
subclass of: SO_0000010

position:115344:-1
position: 115344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115631:-1
position: 115631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115344-115631:-1:exon

SGP1_RS32285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS32285
inference: COORDINATES: protein motif:HMM:NF012607.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTAGIGSNYVDLKAAAERGITVAEVTFPNSISVAEYVVMTLLALVRNYLPSHQMAKNGGWNIANRVTRSYDIEGMHFGTRGALARRFFADLNPSL
SIO_010081: SGP1_RS32285
subclass of: SO_0000673
so part of: SGP1_RS32285
location: complement(115344..115631)
location: region:115344-115631:-1
so has part: feature:115344-115631:-1:exon

WP_243466319.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:115344-115631:-1:exon

SGP1_RS31800
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS31800
so part of: sequence
location: complement(115666..115992)
location: region:115666-115992:-1
so has part: feature:115666-115992:-1:exon
subclass of: SO_0000010

position:115666:-1
position: 115666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115992:-1
position: 115992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115666-115992:-1:exon

SGP1_RS31800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS31800
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKTLCVLYPDPVTCFPPIYARDSLPTILTYPGGQSAPMPSGPLGFTPGALVGSVSGELGLRPYLESHGHELIITSDKDGADPVFERHLPDADVVISQPFWPAYLTHR
SIO_010081: SGP1_RS31800
subclass of: SO_0000673
so part of: SGP1_RS31800
location: complement(115666..115992)
location: region:115666-115992:-1
so has part: feature:115666-115992:-1:exon

WP_198408759.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:115666-115992:-1:exon

SGP1_RS00565
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00565
so part of: sequence
location: complement(116332..116721)
location: region:116332-116721:-1
so has part: feature:116332-116721:-1:exon
subclass of: SO_0000010

position:116332:-1
position: 116332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116721:-1
position: 116721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116332-116721:-1:exon

SGP1_RS00565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00565
inference: COORDINATES: protein motif:HMM:NF015431.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator substrate-binding protein
translation: MASLDGLKQEAALAQTVAGDVLAIGIVPSAMRVVSMLINEYRRNIPWLRLKVFALSTREILSRLKKHELHVGIAYTEQCPAAIYETLPLFTERFVLLTGAASSNMPFSRRASAPRWWLKPIPSMCCIRW
SIO_010081: SGP1_RS00565
subclass of: SO_0000673
so part of: SGP1_RS00565
location: complement(116332..116721)
location: region:116332-116721:-1
so has part: feature:116332-116721:-1:exon

WP_148203315.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:116332-116721:-1:exon

SGP1_RS00570
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: uspA
locus tag: SGP1_RS00570
old locus tag: SG0074
so part of: sequence
location: complement(116767..117231)
location: region:116767-117231:-1
so has part: feature:116767-117231:-1:exon
subclass of: SO_0000010

position:116767:-1
position: 116767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117231:-1
position: 117231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116767-117231:-1:exon

SGP1_RS00570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: uspA
locus tag: SGP1_RS00570
old locus tag: SG0074
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004951550.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: universal stress protein UspA
translation: MAYKHILIAVDLSPESNVLVEKAVSMARPYNAKVSLIHVDVNYSDLYTGLIDVNLGDMQKRISEETQHAMTQLSQNAGYPITETLSGSGDLGQVLVDAINKYDVDLVLCGHHQDFWSKLMSSARQLINTVHVDMLIVPLSDDEEDMDEIAPCPA
SIO_010081: SGP1_RS00570
subclass of: SO_0000673
so part of: SGP1_RS00570
location: complement(116767..117231)
location: region:116767-117231:-1
so has part: feature:116767-117231:-1:exon

WP_011409939.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:116767-117231:-1:exon

SGP1_RS00575
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: uspB
locus tag: SGP1_RS00575
pseudo: true
so part of: sequence
location: 117678..118014
location: region:117678-118014:1
so has part: feature:117678-118014:1:exon
subclass of: SO_0000010

position:117678:1
position: 117678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118014:1
position: 118014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117678-118014:1:exon

SGP1_RS00575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: uspB
locus tag: SGP1_RS00575
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002209527.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: universal stress protein UspB
SIO_010081: SGP1_RS00575
subclass of: SO_0000673
so part of: SGP1_RS00575
location: 117678..118014
location: region:117678-118014:1
so has part: feature:117678-118014:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:117678-118014:1:exon

SGP1_RS00580
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: pitA
locus tag: SGP1_RS00580
old locus tag: SG0075
so part of: sequence
location: complement(118069..119667)
location: region:118069-119667:-1
so has part: feature:118069-119667:-1:exon
subclass of: SO_0000010

position:118069:-1
position: 118069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119667:-1
position: 119667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118069-119667:-1:exon

SGP1_RS00580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: pitA
locus tag: SGP1_RS00580
old locus tag: SG0075
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011193267.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: inorganic phosphate transporter PitA
translation: MLHLFTCMEFHTGLMLVLALIFVLVYEAINGFHDTANAVATVIYTRALRSQLAVAMSGVFNFLGVLMGGLSVAYAIVHLLPTDLLLNVSSAHGLAMMFSMLLAAILWNLGTWYFGLPASSSHTLIGAIIGIGLTNALVSDSSVVQALNIPKLIEIFLSLIISPIVGLVLAGAMVFVLHRYWSSTKKRRRIHLTPAEREKKDGKRKPPFWTRIALIFSAAGVSFSHGANDGQKGIGLIMLVLIGVAPAGFVVNMNASGYDISRTRDAVNHLQQYYTQHPGAFTHVVGPDEQPLPSPAAENAVPGAAPAVDPAVPPAAIGAPMANGQRLDQGDTPQPQEFHCDLSRALFAINRASLLLGNLDSYETLNADQRSHVRRLLMCIADTADKVAKLPETPSADKRFLSNLRQDLLYTVEYAPMWIIIAVALALSLGTMVGWRRVATTIGEKIGKKGMTYAQGLSAQMTAAVSIGVASYTGMPVSTTHVLSSAVTGTMLVDGGGVQGKTVKNILLAWVLTLPVAIILAGSLYWLALKLI
SIO_010081: SGP1_RS00580
subclass of: SO_0000673
so part of: SGP1_RS00580
location: complement(118069..119667)
location: region:118069-119667:-1
so has part: feature:118069-119667:-1:exon

WP_011409940.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:118069-119667:-1:exon

SGP1_RS00585
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00585
pseudo: true
so part of: sequence
location: 119945..121086
location: region:119945-121086:1
so has part: feature:119945-121086:1:exon
subclass of: SO_0000010

position:119945:1
position: 119945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121086:1
position: 121086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119945-121086:1:exon

SGP1_RS00585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00585
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004388946.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: NAD(P)/FAD-dependent oxidoreductase
SIO_010081: SGP1_RS00585
subclass of: SO_0000673
so part of: SGP1_RS00585
location: 119945..121086
location: region:119945-121086:1
so has part: feature:119945-121086:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:119945-121086:1:exon

SGP1_RS00590
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00590
old locus tag: SG0076
so part of: sequence
location: complement(121369..122505)
location: region:121369-122505:-1
so has part: feature:121369-122505:-1:exon
subclass of: SO_0000010

position:121369:-1
position: 121369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122505:-1
position: 122505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121369-122505:-1:exon

SGP1_RS00590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00590
old locus tag: SG0076
inference: COORDINATES: protein motif:HMM:NF013646.2
GO function: GO:0071949 - FAD binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-dependent monooxygenase
translation: MGGLAFAATMRNSRHDVTVYEQANELTELGTGISLWANGTRLFAEIGIATSMAERSCETEAAYFRNEDGSVAASQRLARDNWYRQEYGLPYYGAFRTDLQATLLDVVGRENIWLGKQLTRLDDSGEEATLYWADGTQNAADLVVGADGIRSVVRQTVSDTAHPVFTSNSAFRGLAKTALLDRLTEPHSFTDWMGEDMHVLNFPIGKDFKYQTIVVFMDGPEKWEHDAWRVPANASAIGKKFAHWHPAVGQLFEHVNLAERWGMFQVSPLSSWHRGRAVLIGDAAHGMMPHHGQGAISSFEDAIALAHVINDDTLSSVAAKFDAYERERKARGERIQTSSRSVNDCLHLPAGAARLERNRVLNELGRHFSWLHGYKVGV
SIO_010081: SGP1_RS00590
subclass of: SO_0000673
so part of: SGP1_RS00590
location: complement(121369..122505)
location: region:121369-122505:-1
so has part: feature:121369-122505:-1:exon

WP_041866490.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:121369-122505:-1:exon

SGP1_RS31805
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS31805
so part of: sequence
location: complement(122742..122957)
location: region:122742-122957:-1
so has part: feature:122742-122957:-1:exon
subclass of: SO_0000010

position:122742:-1
position: 122742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122957:-1
position: 122957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122742-122957:-1:exon

SGP1_RS31805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS31805
inference: COORDINATES: protein motif:HMM:NF014899.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLERFEAGDVAYMRALTYEEVEERGGHGGHEALNWVALMGAMKGARPDYVAYESVPEWITGMSYLTYPGQS
SIO_010081: SGP1_RS31805
subclass of: SO_0000673
so part of: SGP1_RS31805
location: complement(122742..122957)
location: region:122742-122957:-1
so has part: feature:122742-122957:-1:exon

WP_050747291.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:122742-122957:-1:exon

SGP1_RS31810
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS31810
so part of: sequence
location: complement(123039..123491)
location: region:123039-123491:-1
so has part: feature:123039-123491:-1:exon
subclass of: SO_0000010

position:123039:-1
position: 123039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123491:-1
position: 123491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123039-123491:-1:exon

SGP1_RS31810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS31810
inference: COORDINATES: protein motif:HMM:NF014899.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMEELKFDTQHSIASHAGIAQTLLEKLIHGGFDATRMGAIEYGNNLMMPLFFINPEFNIPVVPVYINVFSPPLMPYSRAYDLGLKVREIIDTLPDDYRVHFLATGGLSHWPPVWVEGAPEEDELLQRMKVYQTVGKSALVDDPTLYTDFA
SIO_010081: SGP1_RS31810
subclass of: SO_0000673
so part of: SGP1_RS31810
location: complement(123039..123491)
location: region:123039-123491:-1
so has part: feature:123039-123491:-1:exon

WP_050747292.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123039-123491:-1:exon

SGP1_RS00600
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00600
pseudo: true
so part of: sequence
location: complement(123937..124449)
location: region:123937-124449:-1
so has part: feature:123937-124449:-1:exon
subclass of: SO_0000010

position:123937:-1
position: 123937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124449:-1
position: 124449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123937-124449:-1:exon

SGP1_RS00600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002889850.1
GO function: GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0006749 - glutathione metabolic process [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: glutathione S-transferase family protein
SIO_010081: SGP1_RS00600
subclass of: SO_0000673
so part of: SGP1_RS00600
location: complement(123937..124449)
location: region:123937-124449:-1
so has part: feature:123937-124449:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:123937-124449:-1:exon

SGP1_RS32290
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS32290
so part of: sequence
location: 124697..125233
location: region:124697-125233:1
so has part: feature:124697-125233:1:exon
subclass of: SO_0000010

position:124697:1
position: 124697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125233:1
position: 125233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124697-125233:1:exon

SGP1_RS32290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS32290
inference: COORDINATES: protein motif:HMM:NF019474.2
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta hydrolase fold domain-containing protein
translation: MIPEQARTDRQVETFLQALNGADAPPVESLVQARQVIVDAQKSVAIDMSGVDESEQIITVDGSAAEPEYRSPGQYRRGAAGICLFHGGGWVLGDYFTHKRLVRDLVVARGVVGIFAASFQYPYQDPLPNRSPAGGDSPYVFFRWWYSTSSIISPSACRWRCCRGMCMIIWATAPSGQG
SIO_010081: SGP1_RS32290
subclass of: SO_0000673
so part of: SGP1_RS32290
location: 124697..125233
location: region:124697-125233:1
so has part: feature:124697-125233:1:exon

WP_050747293.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:124697-125233:1:exon

SGP1_RS26115
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS26115
pseudo: true
so part of: sequence
location: 125116..>126151
location: region:125116-126151:1
so has part: feature:125116-126151:1:exon
subclass of: SO_0000010

position:125116:1
position: 125116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126151:1
position: 126151
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125116-126151:1:exon

SGP1_RS26115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS26115
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015848364.1
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: MFS transporter
SIO_010081: SGP1_RS26115
subclass of: SO_0000673
so part of: SGP1_RS26115
location: 125116..>126151
location: region:125116-126151:1
so has part: feature:125116-126151:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:125116-126151:1:exon

SGP1_RS00615
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00615
old locus tag: SG0077
so part of: sequence
location: complement(126303..126863)
location: region:126303-126863:-1
so has part: feature:126303-126863:-1:exon
subclass of: SO_0000010

position:126303:-1
position: 126303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126863:-1
position: 126863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126303-126863:-1:exon

SGP1_RS00615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00615
old locus tag: SG0077
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013099152.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DcrB family lipoprotein
translation: MRKVAKYLGIGMLVFGLSACDNSKDKETVGAPDGAEQTQAENKISLLDGKLAFTLPGDMSDQSGKVGTQANNMHVYADSTGRKAVIIILSDDTPQGLDTLAQRLENEQRARDPDLQVVTNKAITVNGKPLQQLDSIVASGGKQAYSAVVLGKVDNHLLTMQVTLPADDQQKAQSAAESIIKTLTFK
SIO_010081: SGP1_RS00615
subclass of: SO_0000673
so part of: SGP1_RS00615
location: complement(126303..126863)
location: region:126303-126863:-1
so has part: feature:126303-126863:-1:exon

WP_011409942.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:126303-126863:-1:exon

SGP1_RS00620
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00620
old locus tag: SG0078
so part of: sequence
location: complement(127001..127666)
location: region:127001-127666:-1
so has part: feature:127001-127666:-1:exon
subclass of: SO_0000010

position:127001:-1
position: 127001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127666:-1
position: 127666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127001-127666:-1:exon

SGP1_RS00620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00620
old locus tag: SG0078
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007891302.1
GO process: GO:1990397 - queuosine salvage [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 7-cyano-7-deazaguanine/7-aminomethyl-7- deazaguanine transporter
translation: MFRFSPQQRLHALIGLALFHLLIITSSNYLVQLPVSIFGFTTTWGAFSFPFIFLATDLTVRIFGALLARRIILTVMVPALLISYCASSLFYQGEWQGFAALGTFNLFVARIACASFMAYALGQILDVHVFNRLRQRGQWWIAPTVSTLFGNASDTVAFFFIAFYQSPDPFMATHWIEIATVDYSFKLLISMIFFLPMYGVLLNMLLKRLARQSNPGLLRLS
SIO_010081: SGP1_RS00620
subclass of: SO_0000673
so part of: SGP1_RS00620
location: complement(127001..127666)
location: region:127001-127666:-1
so has part: feature:127001-127666:-1:exon

WP_011409943.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:127001-127666:-1:exon

SGP1_RS00625
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: tusA
locus tag: SGP1_RS00625
old locus tag: SG0079
so part of: sequence
location: 127863..128117
location: region:127863-128117:1
so has part: feature:127863-128117:1:exon
subclass of: SO_0000010

position:127863:1
position: 127863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128117:1
position: 128117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127863-128117:1:exon

SGP1_RS00625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: tusA
locus tag: SGP1_RS00625
old locus tag: SG0079
EC number: 2.8.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011409944.1
GO function: GO:0097163 - sulfur carrier activity [Evidence IEA]
GO process: GO:0002143 - tRNA wobble position uridine thiolation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfurtransferase TusA
translation: MPDAFAAADQTLDARGLRCPEPVMMVRKAVRHMADGQTLLIISDDPATTRDIPGFCQFMEHTLLAQATEQLPYRYLLRKGRAAA
SIO_010081: SGP1_RS00625
subclass of: SO_0000673
so part of: SGP1_RS00625
location: 127863..128117
location: region:127863-128117:1
so has part: feature:127863-128117:1:exon

WP_011409944.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:127863-128117:1:exon

SGP1_RS00630
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00630
old locus tag: SG0080
so part of: sequence
location: complement(128145..128771)
location: region:128145-128771:-1
so has part: feature:128145-128771:-1:exon
subclass of: SO_0000010

position:128145:-1
position: 128145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128771:-1
position: 128771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128145-128771:-1:exon

SGP1_RS00630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00630
old locus tag: SG0080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002211498.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lysoplasmalogenase
translation: MLWSFMAVVFSGWLYVDASYRGPVWQRWLFQPITLLLLLALAWQAPGLTATSYLIILGLLATLAGSALLMLSSERLLYAVGAFFLCHVLYTIGFVSRMTLTIFWPLPLTLLVLGVALIMFLWSRLDELRWPVCTYIGVTLLMVWVAGEQYFLLGNDYNFSLLAGTALLLVAAAVWLISHYRYPFNAARAVFAACYFTGHFLIVRSLYL
SIO_010081: SGP1_RS00630
subclass of: SO_0000673
so part of: SGP1_RS00630
location: complement(128145..128771)
location: region:128145-128771:-1
so has part: feature:128145-128771:-1:exon

WP_011409945.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:128145-128771:-1:exon

SGP1_RS00635
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00635
old locus tag: SG0081
so part of: sequence
location: 128966..129286
location: region:128966-129286:1
so has part: feature:128966-129286:1:exon
subclass of: SO_0000010

position:128966:1
position: 128966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129286:1
position: 129286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128966-129286:1:exon

SGP1_RS00635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00635
old locus tag: SG0081
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011095813.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1820 family protein
translation: MSSEQPIYRIQFINNGKNYQLFVRELSQSPLFGFIEIGDFVFSSHSNLVVDPSEEKLKTEFSGVSRSYIPLQAVIRIDVVTAKGSARISDLGDNVTMFPYLPGKKP
SIO_010081: SGP1_RS00635
subclass of: SO_0000673
so part of: SGP1_RS00635
location: 128966..129286
location: region:128966-129286:1
so has part: feature:128966-129286:1:exon

WP_011409946.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:128966-129286:1:exon

SGP1_RS00640
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00640
old locus tag: SG0082
so part of: sequence
location: complement(129363..129650)
location: region:129363-129650:-1
so has part: feature:129363-129650:-1:exon
subclass of: SO_0000010

position:129363:-1
position: 129363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129650:-1
position: 129650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129363-129650:-1:exon

SGP1_RS00640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00640
old locus tag: SG0082
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015742805.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1145 family protein
translation: MLINLGRLLMLVVWSFLLFNLIQPFPKPLKYFLDIGLFFMVVMHALQLTLQKATLTKDEAKPGAAFQTRVFLFGVFEMVAWQKKQRAQRLSDRGR
SIO_010081: SGP1_RS00640
subclass of: SO_0000673
so part of: SGP1_RS00640
location: complement(129363..129650)
location: region:129363-129650:-1
so has part: feature:129363-129650:-1:exon

WP_041867313.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:129363-129650:-1:exon

SGP1_RS00645
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: rsmD
locus tag: SGP1_RS00645
old locus tag: SG0083
so part of: sequence
location: complement(129640..130245)
location: region:129640-130245:-1
so has part: feature:129640-130245:-1:exon
subclass of: SO_0000010

position:129640:-1
position: 129640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:130245:-1
position: 130245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129640-130245:-1:exon

SGP1_RS00645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: rsmD
locus tag: SGP1_RS00645
old locus tag: SG0083
EC number: 2.1.1.171
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014888130.1
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO process: GO:0031167 - rRNA methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (guanine(966)-N(2))-methyltransferase
translation: MAKNNTARSAGQIRIIGGRWRGRKLPVPDSPGLRPTTDRVRETLFNWLAPVIQGARCLDCFAGSGALGLEALSRAAASVTLLEQDRAVSAQLARNLLVLQAQQAEVITTDSLRWLAQPGAVFDVVFIDPPFRHGMITATVTALEQHRRLADDSWIYIETETEGPAPEVPAHWQLHREKIAGQISYRLYIRHATPEKQHDTD
SIO_010081: SGP1_RS00645
subclass of: SO_0000673
so part of: SGP1_RS00645
location: complement(129640..130245)
location: region:129640-130245:-1
so has part: feature:129640-130245:-1:exon

WP_011409948.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:129640-130245:-1:exon

SGP1_RS00650
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: ftsY
locus tag: SGP1_RS00650
old locus tag: SG0084
so part of: sequence
location: 130474..131988
location: region:130474-131988:1
so has part: feature:130474-131988:1:exon
subclass of: SO_0000010

position:130474:1
position: 130474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131988:1
position: 131988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130474-131988:1:exon

SGP1_RS00650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: ftsY
locus tag: SGP1_RS00650
old locus tag: SG0084
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013811079.1
GO function: GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: signal recognition particle-docking protein FtsY
translation: MAKEKKRSFFSWLGFNCQDDDAGSEPQAERETDVSGAGGETVTPVAATAARDETAEAVEPALPQAQVERPDADRPSAPPAQAEIPAANRIPAADEPVPPMAARGHDAQRMAAEIVSLTEQVAARQDNVAASERKSATGSNTGAAPSGIGTAATPDDSVDEAAENRQDASAELTLAEEVAPEEDVVPLPTPDGEPPAPERAGFFTRLKNSLVKTRQNLGSGFIGLFRGKKIDDDLFEELEEQLLVADVGVETTRKIIDGLIDHADRRHLKDAEALYSQLRAEMATILVNVERPLEVTGKAPFVILMVGVNGVGKTTTIGKLARLYQAEGKSVMLAAGDTFRAAAVEQLQVWGERNHIPVIAQQTGADSASVIFDSIQAAKARGIEVLIADTAGRLQNKAHLMDELKKIVRVMKKLDVEAPHEVMLTLDASTGQNAVSQANLFNDAVGLTGIALTKLDGTAKGGVIFAVADRFGIPIRFIGVGEAIEDLRPFKADDFIEALFARED
SIO_010081: SGP1_RS00650
subclass of: SO_0000673
so part of: SGP1_RS00650
location: 130474..131988
location: region:130474-131988:1
so has part: feature:130474-131988:1:exon

WP_011409949.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:130474-131988:1:exon

SGP1_RS00655
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: ftsE
locus tag: SGP1_RS00655
old locus tag: SG0085
so part of: sequence
location: 131995..132663
location: region:131995-132663:1
so has part: feature:131995-132663:1:exon
subclass of: SO_0000010

position:131995:1
position: 131995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132663:1
position: 132663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131995-132663:1:exon

SGP1_RS00655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: ftsE
locus tag: SGP1_RS00655
old locus tag: SG0085
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019080173.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cell division ATP-binding protein FtsE
translation: MIRFEQVSKAYLGGRQALQGVDFHLRPAEMAFLTGHSGAGKSTLLKLICGIERPSAGHILFGGHDISRLKNSEIPFLRRQIGMIFQDHHLLMDRTVYDNVAMPLVIAGASLEDIRRRVSAALDKVGLLDKARNFPVQLSGGEQQRIGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDTGLIARRNYRILTLNQGRMTGGVHGE
SIO_010081: SGP1_RS00655
subclass of: SO_0000673
so part of: SGP1_RS00655
location: 131995..132663
location: region:131995-132663:1
so has part: feature:131995-132663:1:exon

WP_011409950.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:131995-132663:1:exon

SGP1_RS00660
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: ftsX
locus tag: SGP1_RS00660
old locus tag: SG0086
so part of: sequence
location: 132653..133669
location: region:132653-133669:1
so has part: feature:132653-133669:1:exon
subclass of: SO_0000010

position:132653:1
position: 132653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133669:1
position: 133669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132653-133669:1:exon

SGP1_RS00660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: ftsX
locus tag: SGP1_RS00660
old locus tag: SG0086
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008458575.1
GO process: GO:0000910 - cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: permease-like cell division protein FtsX
translation: MANKFNRPHRAHKPAKPPRAQTAGEAKAAKSRALRGGWKQQWHYAWLDTLADMWRQPLATLLTVMVIAISLTLPSLCYLVWKNVSQAAEQWYPTPQLTVYLDKVLDDDAALKVIGVLKQEDGVAKVNYLSREEARGEFRDWSGFGGAMDMLEENPLPAVAIITPKVNFQSADTLKTLRDRVAATQGVDGVRMDDSWFARLAALTGLVGKVSAMIGILMVIAVFLVIGNSIRLSIFSRRDTINVMKLIGATDGFILRPFLNGGALLGLAGSVLSLILSGTLVWQLESVVANVAAVFGTTFVLHGLSWDEAILLLLISAMIGWLAAWLATVQHLLRFTPD
SIO_010081: SGP1_RS00660
subclass of: SO_0000673
so part of: SGP1_RS00660
location: 132653..133669
location: region:132653-133669:1
so has part: feature:132653-133669:1:exon

WP_011409951.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:132653-133669:1:exon

SGP1_RS00665
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: rpoH
locus tag: SGP1_RS00665
old locus tag: SG0087
so part of: sequence
location: 133828..134685
location: region:133828-134685:1
so has part: feature:133828-134685:1:exon
subclass of: SO_0000010

position:133828:1
position: 133828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134685:1
position: 134685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133828-134685:1:exon

SGP1_RS00665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: rpoH
locus tag: SGP1_RS00665
old locus tag: SG0087
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006708562.1
GO function: GO:0016987 - sigma factor activity [Evidence IEA]
GO process: GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA polymerase sigma factor RpoH
translation: MIKNMQVLAYVPQGSLEAYVRAANAYPMLTAEEERALAERLHYQGDLEAAKKLILSHLRFVVHIARNYSGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVAKELGVTSKDVREMESRMAAQDMTFDPTPEDEAREGQPMAPMLYLQDKSSDFADGIEEDNWDDHAADKLSAALEGLDERSQDIIRARWLDDDNKSTLQELADRYGVSAERVRQLEKNAMKKMRLVIEA
SIO_010081: SGP1_RS00665
subclass of: SO_0000673
so part of: SGP1_RS00665
location: 133828..134685
location: region:133828-134685:1
so has part: feature:133828-134685:1:exon

WP_011409952.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133828-134685:1:exon

SGP1_RS00670
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: panM
locus tag: SGP1_RS00670
old locus tag: SG0088
so part of: sequence
location: complement(134822..135220)
location: region:134822-135220:-1
so has part: feature:134822-135220:-1:exon
subclass of: SO_0000010

position:134822:-1
position: 134822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135220:-1
position: 135220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134822-135220:-1:exon

SGP1_RS00670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: panM
locus tag: SGP1_RS00670
old locus tag: SG0088
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015872863.1
GO function: GO:0008080 - N-acetyltransferase activity [Evidence IEA]
GO process: GO:0015940 - pantothenate biosynthetic process [Evidence IEA]; GO:0031638 - zymogen activation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aspartate 1-decarboxylase autocleavage activator PanM
translation: MKLTIERLTVLSPQDKRDLVNIWPAVDIDALQQQFTDSFALFAARFNDRLLAAVQVELDAAWGEGRLMGLRVRPETRRRGVGLYLVNETRRQMPDIVSWWLSNQQPLEDAALMGKFMSACGFYEEPDGWHLR
SIO_010081: SGP1_RS00670
subclass of: SO_0000673
so part of: SGP1_RS00670
location: complement(134822..135220)
location: region:134822-135220:-1
so has part: feature:134822-135220:-1:exon

WP_011409953.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134822-135220:-1:exon

SGP1_RS00675
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: ugpB
locus tag: SGP1_RS00675
pseudo: true
so part of: sequence
location: 135501..>136486
location: region:135501-136486:1
so has part: feature:135501-136486:1:exon
subclass of: SO_0000010

position:135501:1
position: 135501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136486:1
position: 136486
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135501-136486:1:exon

SGP1_RS00675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: ugpB
locus tag: SGP1_RS00675
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007671744.1
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB
SIO_010081: SGP1_RS00675
subclass of: SO_0000673
so part of: SGP1_RS00675
location: 135501..>136486
location: region:135501-136486:1
so has part: feature:135501-136486:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:135501-136486:1:exon

SGP1_RS00680
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00680
old locus tag: SG0089
so part of: sequence
location: 136589..137278
location: region:136589-137278:1
so has part: feature:136589-137278:1:exon
subclass of: SO_0000010

position:136589:1
position: 136589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137278:1
position: 137278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136589-137278:1:exon

SGP1_RS00680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00680
old locus tag: SG0089
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010303215.1
note: with UgpABC is involved in uptake of glycerol-3-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycerol-3-phosphate transporter membrane protein
translation: MFSHGLLLAGVVVILFPLYVALVAASLDSHQVFQVPLRLLPGGHLWDNLHQVWSQGVSGQSVPFSSLLLNSLIMALGITVGKITVSLLSAFAIIYFRFPLRNLAFWLIFMTLMLPVEVQTFPTVDVIAHVHMLDSYTRLTLPLSKTNLAVLFVITFIYGWNQYLWLLLIINDASLGTAVAGIQSMIASGDGTTQWNQVMAAMLLTLIAPVTIVLVMQRAFVRGLVDSEK
SIO_010081: SGP1_RS00680
subclass of: SO_0000673
so part of: SGP1_RS00680
location: 136589..137278
location: region:136589-137278:1
so has part: feature:136589-137278:1:exon

WP_041867315.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:136589-137278:1:exon

SGP1_RS00685
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00685
pseudo: true
so part of: sequence
location: 137285..138080
location: region:137285-138080:1
so has part: feature:137285-138080:1:exon
subclass of: SO_0000010

position:137285:1
position: 137285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138080:1
position: 138080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137285-138080:1:exon

SGP1_RS00685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00685
inference: COORDINATES: protein motif:HMM:NF012235.2
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ATP-binding cassette domain-containing protein
SIO_010081: SGP1_RS00685
subclass of: SO_0000673
so part of: SGP1_RS00685
location: 137285..138080
location: region:137285-138080:1
so has part: feature:137285-138080:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:137285-138080:1:exon

SGP1_RS00690
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00690
pseudo: true
so part of: sequence
location: 138245..138943
location: region:138245-138943:1
so has part: feature:138245-138943:1:exon
subclass of: SO_0000010

position:138245:1
position: 138245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138943:1
position: 138943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138245-138943:1:exon

SGP1_RS00690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00690
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014888343.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: glycerophosphoryl diester phosphodiesterase
SIO_010081: SGP1_RS00690
subclass of: SO_0000673
so part of: SGP1_RS00690
location: 138245..138943
location: region:138245-138943:1
so has part: feature:138245-138943:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:138245-138943:1:exon

SGP1_RS22900
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS22900
old locus tag: SG0090
so part of: sequence
location: 139775..140539
location: region:139775-140539:1
so has part: feature:139775-140539:1:exon
subclass of: SO_0000010

position:139775:1
position: 139775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140539:1
position: 140539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139775-140539:1:exon

SGP1_RS22900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS22900
old locus tag: SG0090
inference: COORDINATES: protein motif:HMM:NF024986.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pentapeptide repeat-containing protein
translation: MEKKIADPDDYAIPETLEFAIGAFKVSYSHTPSHWYNGEIKVEVKITEPDNYTTIATVDKELFNRTLTLLLLQKRTHHSAYQYSLTGEGKIDLREANLAGVDVKYADLSSANLRGTNLKAVDMRHAILTRASLANLKFAWLADADLEEATLTGAVCCKTKLWRAHLIGANLSHAGFTCADLSHAKLSNACLRDTTLQGAQLASAKFEGTFVDGASFNNITLRGTHSGPMSGHVPSPSCRSCWRAQTCAVPAQRE
SIO_010081: SGP1_RS22900
subclass of: SO_0000673
so part of: SGP1_RS22900
location: 139775..140539
location: region:139775-140539:1
so has part: feature:139775-140539:1:exon

WP_011409955.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:139775-140539:1:exon

SGP1_RS00705
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: metR
locus tag: SGP1_RS00705
old locus tag: SG0091
so part of: sequence
location: complement(140708..141619)
location: region:140708-141619:-1
so has part: feature:140708-141619:-1:exon
subclass of: SO_0000010

position:140708:-1
position: 140708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141619:-1
position: 141619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140708-141619:-1:exon

SGP1_RS00705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: metR
locus tag: SGP1_RS00705
old locus tag: SG0091
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015699073.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HTH-type transcriptional regulator MetR
translation: MIELKHLRTLQALRNSGSLAAAASQLHQTQSALSHQFSDLEQRLGFRLFVRKSQPLRFTPQGEILLQLAEQILPQVQQALQTCQQPHQATLRLAIECHSCIQWMTPALAEFHQQWPQVLMDFRSGVTFDPQPALQQGELDLVLTSDILPRSGLYYAPMFDFEVRLVLSPDHPLAAKKVIAPQDLDQETLLIYPVQRNRLDIWRHFLQPAGINPMLKTVDNTLLLIQMVSARMGIAALPHWVVESFERQGLIATRTLGEGLWSRLYAAVRDGEQRQPATEAFIHSAQQHACAHLPYVRCAEANL
SIO_010081: SGP1_RS00705
subclass of: SO_0000673
so part of: SGP1_RS00705
location: complement(140708..141619)
location: region:140708-141619:-1
so has part: feature:140708-141619:-1:exon

WP_011409956.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:140708-141619:-1:exon

SGP1_RS00710
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: metE
locus tag: SGP1_RS00710
old locus tag: SG0092
so part of: sequence
location: 141722..143998
location: region:141722-143998:1
so has part: feature:141722-143998:1:exon
subclass of: SO_0000010

position:141722:1
position: 141722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143998:1
position: 143998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141722-143998:1:exon

SGP1_RS00710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: metE
locus tag: SGP1_RS00710
old locus tag: SG0092
EC number: 2.1.1.14
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011409957.1
GO function: GO:0003871 - 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO process: GO:0008652 - amino acid biosynthetic process [Evidence IEA]; GO:0009086 - methionine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase
translation: MAILSHTLGFPRVGLHRELKKAQESYWAGNISQQQLLETGRELRARHWQQQKDAGVDLLPVGDFAWYDHVLTTSLMLDNVPARHRSGANESDIDTLFRIGRGRAPTGEPAAAAEMTKWFNTNYHYMVPEFTLGQQFRLGWTQLLDEVDEALALGHRVKPVLLGPVSYLWLGKVKGEAFDRLSLLPALLPVYKQVLGELAKRGVDWVQIDEQALVLELPQAWREAYREAYQALQGQTKLLLTTYFDSIRHQLDIITALPVQGLHVDLVAGDDDLTELHRQLPAEWVLSAGVINGRNVWRADLQSWFEQLRPLLGKRELWLGSSCSLLHSPIDLSTETQLDEEVKSWFAFALQKCAELGLLRAALNAPDEANQARLGEYSAPIRARRHSSRVHNPEVKARLEKITAADSQRQQPYAARAALQRARFKLPAWPTTTIGSFPQTTEIRGLRLDFKRGRLDGGHYRTGISEHIKQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPPIIIGDISRPEAITIEWARYAQSLTAKPVKGMLTGPVTILCWSFPREDVSRKTIARQIALALRDEVADLEQAGIGVIQIDEPALREGLPLKHSAWQDYLTWAVEAFRLNAAVAQDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLETFKEFDYPNEIGPGVYDIHSPNVPSEEWIVELLRKAAQRIPAERLWVNPDCGLKTRAWPETRQSLANMVTAARKLREEQP
SIO_010081: SGP1_RS00710
subclass of: SO_0000673
so part of: SGP1_RS00710
location: 141722..143998
location: region:141722-143998:1
so has part: feature:141722-143998:1:exon

WP_011409957.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:141722-143998:1:exon

SGP1_RS00720
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00720
so part of: sequence
location: 144919..145680
location: region:144919-145680:1
so has part: feature:144919-145680:1:exon
subclass of: SO_0000010

position:144919:1
position: 144919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145680:1
position: 145680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144919-145680:1:exon

SGP1_RS00720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00720
inference: COORDINATES: protein motif:HMM:NF012307.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: reverse transcriptase domain-containing protein
translation: MQQALLQVLQPLIDPTFSEYSYRFRPGRRGHDAVLASYQYVQDGYRVVVDVDLSKFFDRINHDILIDRLRKHVNDAGVIRLVRAYLNAGIMKGGVVVERAEGTPQGCPLSSLLTNVLLDEVDRELELRGHCFARYADDCNVYVRSEKAGERVMKLLKCRYDKLHLRINTSKSAVASGFGRKFRGYTLWEAPNGEIRRLVSRKALETFKQRIRQLTGRSGGRSISQVIKALRRLCTGLESVFPTSAIGTTLATA
SIO_010081: SGP1_RS00720
subclass of: SO_0000673
so part of: SGP1_RS00720
location: 144919..145680
location: region:144919-145680:1
so has part: feature:144919-145680:1:exon

WP_243466320.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:144919-145680:1:exon

SGP1_RS32295
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS32295
so part of: sequence
location: 145649..145897
location: region:145649-145897:1
so has part: feature:145649-145897:1:exon
subclass of: SO_0000010

position:145649:1
position: 145649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145897:1
position: 145897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145649-145897:1:exon

SGP1_RS32295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS32295
inference: COORDINATES: protein motif:HMM:NF019984.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQSARRWRQLDEWLRRRMRALQLKMWRRGSTIYRELLKLGAKPQVAKSVAALSRRWWHNSLSAVHNVLTIAYLDSLGMPSLT
SIO_010081: SGP1_RS32295
subclass of: SO_0000673
so part of: SGP1_RS32295
location: 145649..145897
location: region:145649-145897:1
so has part: feature:145649-145897:1:exon

WP_243466140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:145649-145897:1:exon

SGP1_RS00725
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00725
pseudo: true
so part of: sequence
location: complement(146115..>146467)
location: region:146115-146467:-1
so has part: feature:146115-146467:-1:exon
subclass of: SO_0000010

position:146115:-1
position: 146115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146467:-1
position: 146467
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146115-146467:-1:exon

SGP1_RS00725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00725
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001445784.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: dienelactone hydrolase family protein
SIO_010081: SGP1_RS00725
subclass of: SO_0000673
so part of: SGP1_RS00725
location: complement(146115..>146467)
location: region:146115-146467:-1
so has part: feature:146115-146467:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:146115-146467:-1:exon

SGP1_RS26125
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS26125
pseudo: true
so part of: sequence
location: <146470..146646
location: region:146470-146646:1
so has part: feature:146470-146646:1:exon
subclass of: SO_0000010

position:146470:1
position: 146470
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:146646:1
position: 146646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146470-146646:1:exon

SGP1_RS26125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS26125
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012989088.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: integrase
SIO_010081: SGP1_RS26125
subclass of: SO_0000673
so part of: SGP1_RS26125
location: <146470..146646
location: region:146470-146646:1
so has part: feature:146470-146646:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:146470-146646:1:exon

SGP1_RS00730
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00730
so part of: sequence
location: 148370..148840
location: region:148370-148840:1
so has part: feature:148370-148840:1:exon
subclass of: SO_0000010

position:148370:1
position: 148370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148840:1
position: 148840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148370-148840:1:exon

SGP1_RS00730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00730
inference: COORDINATES: protein motif:HMM:NF018074.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bacteriophage antitermination protein Q
translation: MNIEWVRGRVKYALADTRQIRNGQLGNLAERTRIETSRFNRNPPRFLSYANGRMVRVPSSPVKAKQTRVKGKSAILMHEYDYYLVPSASSMRRYRRGYAYRYHAEQLKVVPYVWQKFIEQQPGRISGKVKQRLQRLALLAVQVVARITTPTPNWRI
SIO_010081: SGP1_RS00730
subclass of: SO_0000673
so part of: SGP1_RS00730
location: 148370..148840
location: region:148370-148840:1
so has part: feature:148370-148840:1:exon

WP_041866492.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:148370-148840:1:exon

SGP1_RS00735
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00735
so part of: sequence
location: 149489..149731
location: region:149489-149731:1
so has part: feature:149489-149731:1:exon
subclass of: SO_0000010

position:149489:1
position: 149489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149731:1
position: 149731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149489-149731:1:exon

SGP1_RS00735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00735
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQKVIVTLSVLNETRDGAPVGTSAAFKVWQGDNLLIDDTLYGGSTVAYRHDYDVACSDEPLRVKHNRPDLKGLSVTSCVA
SIO_010081: SGP1_RS00735
subclass of: SO_0000673
so part of: SGP1_RS00735
location: 149489..149731
location: region:149489-149731:1
so has part: feature:149489-149731:1:exon

WP_041866493.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:149489-149731:1:exon

SGP1_RS00740
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00740
so part of: sequence
location: 149757..149912
location: region:149757-149912:1
so has part: feature:149757-149912:1:exon
subclass of: SO_0000010

position:149757:1
position: 149757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149912:1
position: 149912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149757-149912:1:exon

SGP1_RS00740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00740
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009483959.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKVSVETKGEVIWFSDTDKGEGLAALGYLRDGTQDQIITALEEALIQAKGE
SIO_010081: SGP1_RS00740
subclass of: SO_0000673
so part of: SGP1_RS00740
location: 149757..149912
location: region:149757-149912:1
so has part: feature:149757-149912:1:exon

WP_041866494.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:149757-149912:1:exon

SGP1_RS26130
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS26130
so part of: sequence
location: 150227..150430
location: region:150227-150430:1
so has part: feature:150227-150430:1:exon
subclass of: SO_0000010

position:150227:1
position: 150227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150430:1
position: 150430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150227-150430:1:exon

SGP1_RS26130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS26130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005161370.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage holin family protein
translation: MRNNPDNSNGKTYYRLCLHLGPCHVLLGAFSLSEWALITGIACTLATFLLNWIYRHKEYRFRTKRDQ
SIO_010081: SGP1_RS26130
subclass of: SO_0000673
so part of: SGP1_RS26130
location: 150227..150430
location: region:150227-150430:1
so has part: feature:150227-150430:1:exon

WP_243466118.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:150227-150430:1:exon

SGP1_RS00745
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00745
old locus tag: SG0094
so part of: sequence
location: 150427..150891
location: region:150427-150891:1
so has part: feature:150427-150891:1:exon
subclass of: SO_0000010

position:150427:1
position: 150427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150891:1
position: 150891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150427-150891:1:exon

SGP1_RS00745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00745
old locus tag: SG0094
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410800.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lysozyme
translation: MNPELRNRLIKATAGGAIALATVLIQWHEGVLYTPYRDSGGVLSVCYGHTGAVAISSPVSATSLLDSDQKAAMAIVDANVTAPLTENQKAALASFVYNVARGAFARSTLLKKLNAGDRAGACDEMRCWKYVDGKVSKGLVNWRSVEREFCLKPL
SIO_010081: SGP1_RS00745
subclass of: SO_0000673
so part of: SGP1_RS00745
location: 150427..150891
location: region:150427-150891:1
so has part: feature:150427-150891:1:exon

WP_011409959.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:150427-150891:1:exon

SGP1_RS26135
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS26135
pseudo: true
so part of: sequence
location: 151078..151554
location: region:151078-151554:1
so has part: feature:151078-151554:1:exon
subclass of: SO_0000010

position:151078:1
position: 151078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151554:1
position: 151554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151078-151554:1:exon

SGP1_RS26135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS26135
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001477519.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: phage antirepressor N-terminal domain-containing protein
SIO_010081: SGP1_RS26135
subclass of: SO_0000673
so part of: SGP1_RS26135
location: 151078..151554
location: region:151078-151554:1
so has part: feature:151078-151554:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:151078-151554:1:exon

SGP1_RS26140
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS26140
pseudo: true
so part of: sequence
location: <151535..>152229
location: region:151535-152229:1
so has part: feature:151535-152229:1:exon
subclass of: SO_0000010

position:151535:1
position: 151535
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:152229:1
position: 152229
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151535-152229:1:exon

SGP1_RS26140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS26140
inference: COORDINATES: similar to AA sequence:RefSeq:NP_706598.1
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF1073 domain-containing protein
SIO_010081: SGP1_RS26140
subclass of: SO_0000673
so part of: SGP1_RS26140
location: <151535..>152229
location: region:151535-152229:1
so has part: feature:151535-152229:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:151535-152229:1:exon

SGP1_RS31275
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS31275
so part of: sequence
location: 152243..152500
location: region:152243-152500:1
so has part: feature:152243-152500:1:exon
subclass of: SO_0000010

position:152243:1
position: 152243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152500:1
position: 152500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152243-152500:1:exon

SGP1_RS31275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS31275
inference: COORDINATES: protein motif:HMM:NF021494.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2213 domain-containing protein
translation: MGHVSNIRQGDDEPSGLLIADLIIKDEIAIEAIDSGLREMSCGYDAKYRQTGPGKAIQYQITGNHVALVPKGRAGIICSIETVSQ
SIO_010081: SGP1_RS31275
subclass of: SO_0000673
so part of: SGP1_RS31275
location: 152243..152500
location: region:152243-152500:1
so has part: feature:152243-152500:1:exon

WP_050747297.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:152243-152500:1:exon

SGP1_RS31280
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS31280
so part of: sequence
location: 152497..152877
location: region:152497-152877:1
so has part: feature:152497-152877:1:exon
subclass of: SO_0000010

position:152497:1
position: 152497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152877:1
position: 152877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152497-152877:1:exon

SGP1_RS31280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS31280
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKCHQSWYQKLRSAIKTGDADTTAELMQNAPRTITGDADDQPGVININLPPQQPLPPEAKAIVEPTADESEAVPSYIKTIMARLDKLEGRTGDAAYRAELIQPGINLSRYPWPIGDRHRQRHHCT
SIO_010081: SGP1_RS31280
subclass of: SO_0000673
so part of: SGP1_RS31280
location: 152497..152877
location: region:152497-152877:1
so has part: feature:152497-152877:1:exon

WP_166506343.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:152497-152877:1:exon

SGP1_RS00765
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00765
old locus tag: SG0095
so part of: sequence
location: 152777..154003
location: region:152777-154003:1
so has part: feature:152777-154003:1:exon
subclass of: SO_0000010

position:152777:1
position: 152777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154003:1
position: 154003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152777-154003:1:exon

SGP1_RS00765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00765
old locus tag: SG0095
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011411480.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: baseplate J/gp47 family protein
translation: MRLIEPNLFSLALICLDTLGLSATVTDSGITAPDYQTILQQLTGYFRQIYGRECYLSPDSKDGQMIAIYALALHDANNAVIAAYNSFSPMTSTGAALSNTVAINGITRHASGYSQADVLLTGQVGTVITHGSVSDRNGQTWRLPERVTFDTHGEARVTAVCTAAGNITAAPGDISDIATPTRGWQTVTNPAAATPGRPVERDSALRARQKKSVALPSRTVLDGIQGAVSLLPGVVRLRGFENDTGETDKNGLPAHSIAMIVDGGDVNAIAQAIALKKTPGAGTYGDTLVKVIDRYGLPKDIRFSRPREVNVAVEITLTAFTGYTTLTGDKIRSAVAAYINQQLIGDNLYLTRLYLPANLPGDEEGQTYDITAIKIGRSAQAVKEENLLVAFNEALSGTTEHLTLVVTT
SIO_010081: SGP1_RS00765
subclass of: SO_0000673
so part of: SGP1_RS00765
location: 152777..154003
location: region:152777-154003:1
so has part: feature:152777-154003:1:exon

WP_011409960.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:152777-154003:1:exon

SGP1_RS00770
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00770
old locus tag: SG0096
so part of: sequence
location: 154000..154653
location: region:154000-154653:1
so has part: feature:154000-154653:1:exon
subclass of: SO_0000010

position:154000:1
position: 154000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154653:1
position: 154653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154000-154653:1:exon

SGP1_RS00770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00770
old locus tag: SG0096
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016191138.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2612 domain-containing protein
translation: MRDYTDFVTPQHWAAPKFVRHIQLMTRPLQDIAALAGQLNALFSLEGAFGKQLDAIGEWIGLSRYVKTPITGVYFALDTDRVGFDQGSWKRRFDADSGFTELDDETYRAILRAKIRANHWDGTCEMLAAIYQGVIPDRTVNIFFTDNQDMSMDVYLTGGVVPEVIKAVIRQGYLNIKPEGVKLNAYSGSEGDNGIFGFDIRNGYVDGFDTGSWSVKL
SIO_010081: SGP1_RS00770
subclass of: SO_0000673
so part of: SGP1_RS00770
location: 154000..154653
location: region:154000-154653:1
so has part: feature:154000-154653:1:exon

WP_011409961.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:154000-154653:1:exon

SGP1_RS32300
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS32300
old locus tag: SG0097
so part of: sequence
location: 154660..155484
location: region:154660-155484:1
so has part: feature:154660-155484:1:exon
subclass of: SO_0000010

position:154660:1
position: 154660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155484:1
position: 155484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154660-155484:1:exon

SGP1_RS32300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS32300
old locus tag: SG0097
inference: COORDINATES: protein motif:HMM:NF015371.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage tail protein
translation: MMAKNEFLPFATADGANVLSAEDYQTLRSRSNGFSAGVARSQELNTVWRQASVIAHVVAQFIADTNNSDVADDGDLDKLQAGLIQALSKNVNNTVPAASLKTAGITQLSSATNSDSETLAAMPKAVKAIVDNLSGGRLLNIQSFTESGIYTPTPGTRKIRVKCWGAGGSGARMSKQSRGSVSGAGGAYAEVLLDATSFSSVSVEVGTGGAASADGVSLDGGDGGGSYFGKHVICGGGKGGLIGKGLAKGGEPAGGNVMMVGGQSGKGEPTLPVF
SIO_010081: SGP1_RS32300
subclass of: SO_0000673
so part of: SGP1_RS32300
location: 154660..155484
location: region:154660-155484:1
so has part: feature:154660-155484:1:exon

WP_011409962.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:154660-155484:1:exon

SGP1_RS28865
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS28865
so part of: sequence
location: complement(156010..156450)
location: region:156010-156450:-1
so has part: feature:156010-156450:-1:exon
subclass of: SO_0000010

position:156010:-1
position: 156010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156450:-1
position: 156450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156010-156450:-1:exon

SGP1_RS28865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS28865
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFFISILFLSQLYSHTQEPKKLLPRSANQLYTFVKENNLTYGYSLYWGAQALAVSWISGWHNIIRPVMFDKKNGSIIFSGRSQTFTYWYNNVHKGRTFIAIMKDVEECHDLDRCLIGVKHRPGEPDEILTHKDMTFYIYKNGIFIK
SIO_010081: SGP1_RS28865
subclass of: SO_0000673
so part of: SGP1_RS28865
location: complement(156010..156450)
location: region:156010-156450:-1
so has part: feature:156010-156450:-1:exon

WP_148203317.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:156010-156450:-1:exon

SGP1_RS00785
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00785
old locus tag: SG0098
so part of: sequence
location: 156879..157802
location: region:156879-157802:1
so has part: feature:156879-157802:1:exon
subclass of: SO_0000010

position:156879:1
position: 156879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157802:1
position: 157802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156879-157802:1:exon

SGP1_RS00785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00785
old locus tag: SG0098
inference: COORDINATES: similar to AA sequence:RefSeq:WP_032491235.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MAKQKFKITNWSTYNKALKQRGALTIWLDESAIVAWTEKTTPERRGRPLHYADMAITTVLMMKRVFGLSLSALQGFVDAIFKLMVLLLRCPDYSLISKRAKTVKISIKTPTRGEISPLVIDGTGLKVFGEGEWKVRQHGADRRRVWRKLHMAADSVTHEIICADLSLSGTTDAQALPALINQTQRKIREASADGAYDTRYCHDALLRKKIRPLIPPRGGAQYWPDRYHERNYAVANQHLSGSNDVWKKQVGYHRRSVAETAIFRFKTLMGDHLSLRDYDAQVGEAMAMVKALNKMTLLGMPNSIRIA
SIO_010081: SGP1_RS00785
subclass of: SO_0000673
so part of: SGP1_RS00785
location: 156879..157802
location: region:156879-157802:1
so has part: feature:156879-157802:1:exon

WP_011409963.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:156879-157802:1:exon

SGP1_RS00790
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00790
old locus tag: SG0099
so part of: sequence
location: 158286..158690
location: region:158286-158690:1
so has part: feature:158286-158690:1:exon
subclass of: SO_0000010

position:158286:1
position: 158286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158690:1
position: 158690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158286-158690:1:exon

SGP1_RS00790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00790
old locus tag: SG0099
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011279276.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGQVAFDTLQASEELETAGISREQARAISLVVRKSHEVADVATKADIVEVKRDIADVCKDMEARFEKNEAQMQARFEKTDAQIADVRKDLSAEIALLRKDVEHTANGLLIKLSAVMLAIAGLASTIVTVAIKLL
SIO_010081: SGP1_RS00790
subclass of: SO_0000673
so part of: SGP1_RS00790
location: 158286..158690
location: region:158286-158690:1
so has part: feature:158286-158690:1:exon

WP_011409964.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:158286-158690:1:exon

SGP1_RS28870
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS28870
so part of: sequence
location: complement(158831..159112)
location: region:158831-159112:-1
so has part: feature:158831-159112:-1:exon
subclass of: SO_0000010

position:158831:-1
position: 158831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159112:-1
position: 159112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158831-159112:-1:exon

SGP1_RS28870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS28870
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLDNARVLTFRHPNMGEVVAITNGGESIDDARYLVSLGRQPNEDWETQTLRAVIEYMAEDNKQLRKQVRRLMQEGVAKSGGSNRHRTHVLTV
SIO_010081: SGP1_RS28870
subclass of: SO_0000673
so part of: SGP1_RS28870
location: complement(158831..159112)
location: region:158831-159112:-1
so has part: feature:158831-159112:-1:exon

WP_148203318.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:158831-159112:-1:exon

SGP1_RS00800
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00800
pseudo: true
so part of: sequence
location: complement(159156..159424)
location: region:159156-159424:-1
so has part: feature:159156-159424:-1:exon
subclass of: SO_0000010

position:159156:-1
position: 159156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159424:-1
position: 159424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159156-159424:-1:exon

SGP1_RS00800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00800
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013813194.1
GO function: GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: VRR-NUC domain-containing protein
SIO_010081: SGP1_RS00800
subclass of: SO_0000673
so part of: SGP1_RS00800
location: complement(159156..159424)
location: region:159156-159424:-1
so has part: feature:159156-159424:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:159156-159424:-1:exon

SGP1_RS00805
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00805
so part of: sequence
location: complement(159427..159606)
location: region:159427-159606:-1
so has part: feature:159427-159606:-1:exon
subclass of: SO_0000010

position:159427:-1
position: 159427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159606:-1
position: 159606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159427-159606:-1:exon

SGP1_RS00805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00805
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNIEKPSMTIVPFANANCNAWDFGNGNVVYDFLTADRMAKPSPNTSTGALARAINDGKA
SIO_010081: SGP1_RS00805
subclass of: SO_0000673
so part of: SGP1_RS00805
location: complement(159427..159606)
location: region:159427-159606:-1
so has part: feature:159427-159606:-1:exon

WP_041866496.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:159427-159606:-1:exon

SGP1_RS26155
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS26155
pseudo: true
so part of: sequence
location: complement(159611..>160925)
location: region:159611-160925:-1
so has part: feature:159611-160925:-1:exon
subclass of: SO_0000010

position:159611:-1
position: 159611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160925:-1
position: 160925
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159611-160925:-1:exon

SGP1_RS26155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS26155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000065468.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DNA polymerase
SIO_010081: SGP1_RS26155
subclass of: SO_0000673
so part of: SGP1_RS26155
location: complement(159611..>160925)
location: region:159611-160925:-1
so has part: feature:159611-160925:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:159611-160925:-1:exon

SGP1_RS26160
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS26160
so part of: sequence
location: complement(160906..161112)
location: region:160906-161112:-1
so has part: feature:160906-161112:-1:exon
subclass of: SO_0000010

position:160906:-1
position: 160906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161112:-1
position: 161112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160906-161112:-1:exon

SGP1_RS26160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS26160
inference: COORDINATES: protein motif:HMM:NF024835.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MSNKQVKSVAELSRRIGMPQPTLHRMLNGEVKSPRLAVVQNIAKFFNVEANDLLYKDLTLKDNHQPYR
SIO_010081: SGP1_RS26160
subclass of: SO_0000673
so part of: SGP1_RS26160
location: complement(160906..161112)
location: region:160906-161112:-1
so has part: feature:160906-161112:-1:exon

WP_243466277.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160906-161112:-1:exon

SGP1_RS32305
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS32305
pseudo: true
so part of: sequence
location: <162503..163593
location: region:162503-163593:1
so has part: feature:162503-163593:1:exon
subclass of: SO_0000010

position:162503:1
position: 162503
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:163593:1
position: 163593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162503-163593:1:exon

SGP1_RS32305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS32305
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001337135.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: VapE family protein
SIO_010081: SGP1_RS32305
subclass of: SO_0000673
so part of: SGP1_RS32305
location: <162503..163593
location: region:162503-163593:1
so has part: feature:162503-163593:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:162503-163593:1:exon

SGP1_RS30480
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS30480
so part of: sequence
location: 163751..163894
location: region:163751-163894:1
so has part: feature:163751-163894:1:exon
subclass of: SO_0000010

position:163751:1
position: 163751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163894:1
position: 163894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163751-163894:1:exon

SGP1_RS30480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS30480
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRPRGRLTASDIPLIRALLDSGMPVAEAARKFEVRKQNIYSIKNNKS
SIO_010081: SGP1_RS30480
subclass of: SO_0000673
so part of: SGP1_RS30480
location: 163751..163894
location: region:163751-163894:1
so has part: feature:163751-163894:1:exon

WP_158302298.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:163751-163894:1:exon

SGP1_RS28875
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS28875
so part of: sequence
location: 163906..164025
location: region:163906-164025:1
so has part: feature:163906-164025:1:exon
subclass of: SO_0000010

position:163906:1
position: 163906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164025:1
position: 164025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163906-164025:1:exon

SGP1_RS28875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS28875
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: bacteriophage antitermination protein Q
translation: MNIEWVRGRVRDALADFRNVRNGQLGNLAERTRVEMSQS
SIO_010081: SGP1_RS28875
subclass of: SO_0000673
so part of: SGP1_RS28875
location: 163906..164025
location: region:163906-164025:1
so has part: feature:163906-164025:1:exon

WP_148203321.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:163906-164025:1:exon

SGP1_RS28880
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS28880
so part of: sequence
location: 164039..164161
location: region:164039-164161:1
so has part: feature:164039-164161:1:exon
subclass of: SO_0000010

position:164039:1
position: 164039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164161:1
position: 164161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164039-164161:1:exon

SGP1_RS28880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS28880
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: bacteriophage antitermination protein Q
translation: MSYANGRTFRVPSSPVKAKQTRVKGKSAILMLEYDYSLVP
SIO_010081: SGP1_RS28880
subclass of: SO_0000673
so part of: SGP1_RS28880
location: 164039..164161
location: region:164039-164161:1
so has part: feature:164039-164161:1:exon

WP_148203322.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:164039-164161:1:exon

SGP1_RS26170
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS26170
so part of: sequence
location: 164265..164543
location: region:164265-164543:1
so has part: feature:164265-164543:1:exon
subclass of: SO_0000010

position:164265:1
position: 164265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164543:1
position: 164543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164265-164543:1:exon

SGP1_RS26170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS26170
inference: COORDINATES: protein motif:HMM:NF018074.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bacteriophage antitermination protein Q
translation: MWQKFIEQQPGRIFGKVKQRLQELTLLAVRLVEREIGGCPKRYTYAELANMVGVTVDNWRKWYQGFWREILELCTEIYSFSLQQLMKRKSDN
SIO_010081: SGP1_RS26170
subclass of: SO_0000673
so part of: SGP1_RS26170
location: 164265..164543
location: region:164265-164543:1
so has part: feature:164265-164543:1:exon

WP_050747304.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:164265-164543:1:exon

SGP1_RS00835
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00835
old locus tag: SG0100
so part of: sequence
location: 165067..165843
location: region:165067-165843:1
so has part: feature:165067-165843:1:exon
subclass of: SO_0000010

position:165067:1
position: 165067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165843:1
position: 165843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165067-165843:1:exon

SGP1_RS00835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00835
old locus tag: SG0100
EC number: 3.5.1.28
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015683482.1
GO function: GO:0008745 - N-acetylmuramoyl-L-alanine amidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO process: GO:0071555 - cell wall organization [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N-acetylmuramoyl-L-alanine amidase
translation: MYLIDYNSYRAVKSFNRRVRFLVMHYTAVNFKGSITVLTGNSVSAHYLVPDPSDKTYTDAGFKDMRVFNLVDENDRAWHAGASDWAGRSNLNDTAIGIETVNLATDNHGEFVFPPFHLQQIDAIIELSKNIVQRYPDITPVNIVGHSDIAPGRKSDPGAAFPWKELYQAGIGAWPDADTVEKYTVKFISQGVPERSAIINLLNKYGYSVKAANTADGFKQLIRAFQLHFRQENYDGVLDTETAAILAALCEKYKNIKS
SIO_010081: SGP1_RS00835
subclass of: SO_0000673
so part of: SGP1_RS00835
location: 165067..165843
location: region:165067-165843:1
so has part: feature:165067-165843:1:exon

WP_011409965.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:165067-165843:1:exon

SGP1_RS00840
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00840
old locus tag: SG0101
so part of: sequence
location: 166176..166682
location: region:166176-166682:1
so has part: feature:166176-166682:1:exon
subclass of: SO_0000010

position:166176:1
position: 166176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166682:1
position: 166682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166176-166682:1:exon

SGP1_RS00840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00840
old locus tag: SG0101
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDISTTGLTTKKPQAAGILRYLDHLVKETDIGWAEVNHDNPERLCDQVARRNFNRTVLTAELESQSFNACTRMLAHLEGGYGQHLRGVLDFAAEQVGQTEEDPVKVSTAYKYPTLIEDIIIALHERLGRYDVLVDPGAYIQRHSELTSKDIKALSSVGIGADLLTANA
SIO_010081: SGP1_RS00840
subclass of: SO_0000673
so part of: SGP1_RS00840
location: 166176..166682
location: region:166176-166682:1
so has part: feature:166176-166682:1:exon

WP_041866499.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:166176-166682:1:exon

SGP1_RS26175
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS26175
so part of: sequence
location: 167033..167167
location: region:167033-167167:1
so has part: feature:167033-167167:1:exon
subclass of: SO_0000010

position:167033:1
position: 167033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167167:1
position: 167167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167033-167167:1:exon

SGP1_RS26175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS26175
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: phage holin family protein
translation: MEKLTTGSAYSWALVTCLLGAFSLIDYRYRLYAGDLPAELDLPA
SIO_010081: SGP1_RS26175
subclass of: SO_0000673
so part of: SGP1_RS26175
location: 167033..167167
location: region:167033-167167:1
so has part: feature:167033-167167:1:exon

WP_243466327.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:167033-167167:1:exon

SGP1_RS32310
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS32310
so part of: sequence
location: 167133..167210
location: region:167133-167210:1
so has part: feature:167133-167210:1:exon
subclass of: SO_0000010

position:167133:1
position: 167133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167210:1
position: 167210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167133-167210:1:exon

SGP1_RS32310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS32310
inference: COORDINATES: protein motif:HMM:NF027406.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage holin family protein
translation: MTFLLNWIYRHKEYRFRRDWSVGGQ
SIO_010081: SGP1_RS32310
subclass of: SO_0000673
so part of: SGP1_RS32310
location: 167133..167210
location: region:167133-167210:1
so has part: feature:167133-167210:1:exon

WP_243466321.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:167133-167210:1:exon

SGP1_RS00845
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00845
so part of: sequence
location: 167298..167654
location: region:167298-167654:1
so has part: feature:167298-167654:1:exon
subclass of: SO_0000010

position:167298:1
position: 167298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167654:1
position: 167654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167298-167654:1:exon

SGP1_RS00845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00845
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKPINVDFFVGKFLRDYGLKNSDLYPLKLAEFDGNILKLETYEELGGELVINLSDSFFEEKLKIKVKNAKGEASSGGSKLINNEYVDISAGGPTPSVVVISVPLNGRFEMSGFSIVPR
SIO_010081: SGP1_RS00845
subclass of: SO_0000673
so part of: SGP1_RS00845
location: 167298..167654
location: region:167298-167654:1
so has part: feature:167298-167654:1:exon

WP_041866500.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:167298-167654:1:exon

SGP1_RS00850
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00850
old locus tag: SG0102
so part of: sequence
location: 167716..168060
location: region:167716-168060:1
so has part: feature:167716-168060:1:exon
subclass of: SO_0000010

position:167716:1
position: 167716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168060:1
position: 168060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167716-168060:1:exon

SGP1_RS00850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00850
old locus tag: SG0102
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011411208.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTALSIVVRIQSLDITRLKQANQSMVAERDAARAQFTHYEQAVALFNQIAGATQDAHQHAVQDFQPRIIQIREALTPERCARLPVPTSVVNRLRAYADQIPAHPARADTGHTAR
SIO_010081: SGP1_RS00850
subclass of: SO_0000673
so part of: SGP1_RS00850
location: 167716..168060
location: region:167716-168060:1
so has part: feature:167716-168060:1:exon

WP_041866501.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:167716-168060:1:exon

SGP1_RS00860
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00860
old locus tag: SG0103
so part of: sequence
location: 168193..168507
location: region:168193-168507:1
so has part: feature:168193-168507:1:exon
subclass of: SO_0000010

position:168193:1
position: 168193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168507:1
position: 168507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168193-168507:1:exon

SGP1_RS00860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00860
old locus tag: SG0103
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011411469.1
GO function: GO:0004519 - endonuclease activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HNH endonuclease signature motif containing protein
translation: MTEPRIYGSRWDKARRAFLARHPLCMMCQQQGKTVAATVVDHITPHKLKAALQSGNTVAIAQVQGLFWERRNWQPLCTLHHNATKQRMEKRGGGMGCDLQGMPL
SIO_010081: SGP1_RS00860
subclass of: SO_0000673
so part of: SGP1_RS00860
location: 168193..168507
location: region:168193-168507:1
so has part: feature:168193-168507:1:exon

WP_011409968.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:168193-168507:1:exon

SGP1_RS32315
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS32315
so part of: sequence
location: 169172..169591
location: region:169172-169591:1
so has part: feature:169172-169591:1:exon
subclass of: SO_0000010

position:169172:1
position: 169172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169591:1
position: 169591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169172-169591:1:exon

SGP1_RS32315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS32315
inference: COORDINATES: protein motif:HMM:NF015321.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: terminase large subunit
translation: MDYDVVARDIAAILGDYDVDAIAFDRWRIEIFCKAAQDIGLTLPLKEFGQCFKDMAPAIDRLESLLLNGQLRHGTHPVLTMCAANAVINKDAAGNRKLDKAKATGRIDGMVAMAVGALNGEMAASGGDFEDLLSRLLSM
SIO_010081: SGP1_RS32315
subclass of: SO_0000673
so part of: SGP1_RS32315
location: 169172..169591
location: region:169172-169591:1
so has part: feature:169172-169591:1:exon

WP_050747305.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:169172-169591:1:exon

SGP1_RS00870
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00870
pseudo: true
so part of: sequence
location: 169591..170853
location: region:169591-170853:1
so has part: feature:169591-170853:1:exon
subclass of: SO_0000010

position:170853:1
position: 170853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169591-170853:1:exon

SGP1_RS00870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00870
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006326642.1
GO component: GO:0044423 - virion component [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0019068 - virion assembly [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: phage portal protein
SIO_010081: SGP1_RS00870
subclass of: SO_0000673
so part of: SGP1_RS00870
location: 169591..170853
location: region:169591-170853:1
so has part: feature:169591-170853:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:169591-170853:1:exon

SGP1_RS00875
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00875
pseudo: true
so part of: sequence
location: <170858..>171217
location: region:170858-171217:1
so has part: feature:170858-171217:1:exon
subclass of: SO_0000010

position:170858:1
position: 170858
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:171217:1
position: 171217
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170858-171217:1:exon

SGP1_RS00875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00875
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004251594.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: phage major capsid protein
SIO_010081: SGP1_RS00875
subclass of: SO_0000673
so part of: SGP1_RS00875
location: <170858..>171217
location: region:170858-171217:1
so has part: feature:170858-171217:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:170858-171217:1:exon

SGP1_RS00880
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00880
old locus tag: SG0104
so part of: sequence
location: 171406..171732
location: region:171406-171732:1
so has part: feature:171406-171732:1:exon
subclass of: SO_0000010

position:171406:1
position: 171406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171732:1
position: 171732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171406-171732:1:exon

SGP1_RS00880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00880
old locus tag: SG0104
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020803184.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSTKILRQAGRAALTPVQADMRQHAGFDAESHDVHMRDSITIRSTTGGRAQVTLRVGPEKKHRMKALAQEWGTVKQVAHPFIRPALEYQTSHVLRLLAAEIRRGIENR
SIO_010081: SGP1_RS00880
subclass of: SO_0000673
so part of: SGP1_RS00880
location: 171406..171732
location: region:171406-171732:1
so has part: feature:171406-171732:1:exon

WP_148203323.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:171406-171732:1:exon

SGP1_RS00885
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00885
pseudo: true
so part of: sequence
location: <171774..172172
location: region:171774-172172:1
so has part: feature:171774-172172:1:exon
subclass of: SO_0000010

position:171774:1
position: 171774
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:172172:1
position: 172172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171774-172172:1:exon

SGP1_RS00885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00885
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006533916.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: phage tail protein
SIO_010081: SGP1_RS00885
subclass of: SO_0000673
so part of: SGP1_RS00885
location: <171774..172172
location: region:171774-172172:1
so has part: feature:171774-172172:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:171774-172172:1:exon

SGP1_RS00890
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00890
old locus tag: SG0105
so part of: sequence
location: 172169..172534
location: region:172169-172534:1
so has part: feature:172169-172534:1:exon
subclass of: SO_0000010

position:172169:1
position: 172169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172534:1
position: 172534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172169-172534:1:exon

SGP1_RS00890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00890
old locus tag: SG0105
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004935834.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKQTVYTDNLKMSLLKPLNTAQECELLGGRYFICRLSALALLEQEEKATQAFDAGDMRQASLLNVQMLLDCLCDPDGQPIPPEALPSADALMAAHDNGTLLDAIATVKRHAMGSLEDAQKN
SIO_010081: SGP1_RS00890
subclass of: SO_0000673
so part of: SGP1_RS00890
location: 172169..172534
location: region:172169-172534:1
so has part: feature:172169-172534:1:exon

WP_011409970.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:172169-172534:1:exon

SGP1_RS32320
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS32320
so part of: sequence
location: 172769..173854
location: region:172769-173854:1
so has part: feature:172769-173854:1:exon
subclass of: SO_0000010

position:172769:1
position: 172769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173854:1
position: 173854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172769-173854:1:exon

SGP1_RS32320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS32320
inference: COORDINATES: protein motif:HMM:TIGR01760.1
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0016032 - viral process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage tail tape measure protein
translation: MADIASLAVGLYLNNAFTPQLTAVYRQAGDQSRRFSRNVQQETQKAEVAYQRLASAIGGVASRLAGLAGVGLSLGAVIHTSRQYSQALSDLSAITGATGEALKKLDAAAQQMGRTTEYSASQAAEALKLMVSAKPALLNTADGLTNATHSALILAQASGTTLPEAIRMLALSLNQFGASAEQADRYINVLVAGAKYGSSEIAQTSEAIRNGGVAAAQAGVGFEQLNAAIQVLAEREVKGGQAGTALRNVILTLEKGTDKTLKPSVVGLVGALDTLAKKKLSTAQAVKLFGVENINAASILVDNRDKLEALTHALTGTQTAYEQSAIRVNNLNGDLMGLTSAFEGLVSQVGQSGNGPLRTGI
SIO_010081: SGP1_RS32320
subclass of: SO_0000673
so part of: SGP1_RS32320
location: 172769..173854
location: region:172769-173854:1
so has part: feature:172769-173854:1:exon

WP_050747306.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:172769-173854:1:exon

SGP1_RS32325
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS32325
so part of: sequence
location: 174192..174482
location: region:174192-174482:1
so has part: feature:174192-174482:1:exon
subclass of: SO_0000010

position:174192:1
position: 174192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174482:1
position: 174482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174192-174482:1:exon

SGP1_RS32325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS32325
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRATEQLAAANARLSVSAAVSVARGARALWWAAILAGSALLYFHQKAKDARESAIGLKEAVTETTEALMALSSKQLVSRCWICRRSIKTKSPNVTS
SIO_010081: SGP1_RS32325
subclass of: SO_0000673
so part of: SGP1_RS32325
location: 174192..174482
location: region:174192-174482:1
so has part: feature:174192-174482:1:exon

WP_243466141.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:174192-174482:1:exon

SGP1_RS32330
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS32330
so part of: sequence
location: 174437..175078
location: region:174437-175078:1
so has part: feature:174437-175078:1:exon
subclass of: SO_0000010

position:174437:1
position: 174437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175078:1
position: 175078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174437-175078:1:exon

SGP1_RS32330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS32330
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSAQYQNQITQRNQLMKAVQDYDSRLEGLNAFDPFGQRSEVEADKKRALADWEAVNKGAQTVKASLDNAHQALAHLKAGAYGPVKPKQATPPETVKTPWSGLDSPTAKSGQKLALNQYQQLRQEIEQAHAGSLQRLALQEQAAQSRLLASAKATGVAQSDLQRVQGMQAENYQRQRQQLAERYSPVKTQLRHERDASRELNALWAARLLSEQD
SIO_010081: SGP1_RS32330
subclass of: SO_0000673
so part of: SGP1_RS32330
location: 174437..175078
location: region:174437-175078:1
so has part: feature:174437-175078:1:exon

WP_148203606.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:174437-175078:1:exon

SGP1_RS32335
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS32335
so part of: sequence
location: 175082..175900
location: region:175082-175900:1
so has part: feature:175082-175900:1:exon
subclass of: SO_0000010

position:175082:1
position: 175082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175900:1
position: 175900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175082-175900:1:exon

SGP1_RS32335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS32335
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: phage tail tape measure protein
translation: MARHQLTYTRTQALAKAQAESAAAPRLSLAGEIDPVVALQNQLVRQQSLLDAYYANGSLSKTQYEALMQKTAQDSADAQYQAALALYGGQSRLHKLSLSLAETLRERTTNMLTGARSFKESLSGLFASLAQSVIKNLVDTAAQALITKTLFSSFMGGFGGGGRSAANAFSSGAYNGLSLNAKGGVYASRSLSAFSGQVVSQPTLFAFSHGAGLMGESGPEAIMPLKRGPDGSLGVQAVDGGGRGGDVIVNMGGFVFTTDERSDSAAGAGDGC
SIO_010081: SGP1_RS32335
subclass of: SO_0000673
so part of: SGP1_RS32335
location: 175082..175900
location: region:175082-175900:1
so has part: feature:175082-175900:1:exon

WP_050747309.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:175082-175900:1:exon

SGP1_RS00900
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00900
so part of: sequence
location: 176003..176338
location: region:176003-176338:1
so has part: feature:176003-176338:1:exon
subclass of: SO_0000010

position:176003:1
position: 176003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176338:1
position: 176338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176003-176338:1:exon

SGP1_RS00900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00900
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013511389.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage tail protein
translation: MDTFSWPVRVNSSEQLKVATIEAQFGEGYKQVSSKGIHDISESWLLSCNGDRASLLAVRRFLINHVTSAFWWVNPWGEKKRYRVKSDAIRTRFLHGALVEIGFTFGEAFST
SIO_010081: SGP1_RS00900
subclass of: SO_0000673
so part of: SGP1_RS00900
location: 176003..176338
location: region:176003-176338:1
so has part: feature:176003-176338:1:exon

WP_041866505.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:176003-176338:1:exon

SGP1_RS00905
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00905
old locus tag: SG0106
so part of: sequence
location: 176335..177072
location: region:176335-177072:1
so has part: feature:176335-177072:1:exon
subclass of: SO_0000010

position:176335:1
position: 176335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177072:1
position: 177072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176335-177072:1:exon

SGP1_RS00905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00905
old locus tag: SG0106
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015700595.1
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0016032 - viral process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage minor tail protein L
translation: MSLTQDLQSLEPGSLVQLVEVDGTAFGMDRVLRFHAHNINVDGWASFAGENLPSIRWQGNEYDPHPYTVTGLASTSTGSQPQPGLSVGNIGNHVTTLCLAYDDLVQAKVKIHTTLAKYLDAANWQEGNPLADNTQERVQLFYVNAKVSETPEQMDFELCTPFDIQNLQLPTRQISPVCIWAMRGWYRSGNGCDYQGIKYFTKAGVPTNDPSKDVCGGRLADCKSRFGPDQPLSFGGQPSANLQGR
SIO_010081: SGP1_RS00905
subclass of: SO_0000673
so part of: SGP1_RS00905
location: 176335..177072
location: region:176335-177072:1
so has part: feature:176335-177072:1:exon

WP_011409971.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:176335-177072:1:exon

SGP1_RS00910
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00910
so part of: sequence
location: 177074..177397
location: region:177074-177397:1
so has part: feature:177074-177397:1:exon
subclass of: SO_0000010

position:177074:1
position: 177074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177397:1
position: 177397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177074-177397:1:exon

SGP1_RS00910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00910
inference: COORDINATES: protein motif:HMM:NF025819.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: C40 family peptidase
translation: MDETLLGPIREHVVREYPKEACGLIVQTATGAHYLPCRNIHPSPTDHFTLAPDDYAQAAVQGDIVMIVHSHPDVVRLLPSKLDRLQCDYSGVEWALCRGRTEIFAPR
SIO_010081: SGP1_RS00910
subclass of: SO_0000673
so part of: SGP1_RS00910
location: 177074..177397
location: region:177074-177397:1
so has part: feature:177074-177397:1:exon

WP_050747310.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:177074-177397:1:exon

SGP1_RS30485
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS30485
so part of: sequence
location: complement(177415..179223)
location: region:177415-179223:-1
so has part: feature:177415-179223:-1:exon
subclass of: SO_0000010

position:177415:-1
position: 177415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179223:-1
position: 179223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177415-179223:-1:exon

SGP1_RS30485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS30485
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014609457.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YadA-like family protein
translation: MKKMLPPMVATLYLIHIPCVLAEEDKGHHAKLYHNQQIKQPEQETHAYAPNYGTVVGNNGSAMAMGIQSRVDSDTPAIAMGDSAIAAADYSISIGGSSYSDGISSIAMGVLSYTGGNYGLAVGASSHARATESTALGSNSFSLSPSSVALGSESMTERQPGIITELFTNANRQTSGEVSIGNNYQLRQITHIAGGTEKTDAANIGQLQAIDNKITNLNSRFDENVSKNKEFMENMEKNTQIIADSTEDIKKHTQDASQFSTLTQEHKEHAFSALQKTQSHESAASISAQNAAEHESFAHSSAAQVAKFKDIAEHDAQSIEGNKRVSEGALTHIEKSRKDAKEMADMTNNLEMAASKSSHKAAEHEETARVSANEAGQHRDATLHARNTAVDLATQTIEYKDKAKKSFVQIEGYQQQAHRNFIALKKQHNKLLTQERRDKKNIDRKITEDANGVIHIGQYENGTSISVSGQQGDRTITGVAEGVRGNDAANIAQLNRVKNTATTAHAIAQKNTSRIKNLENQLSKTNAKIDRGLAASAALTSLFQPYGVGKFNVTAGIGGYGSSQALAIGTGYRINKNMAIKAGAAYSASGSMMYNASFNVEW
SIO_010081: SGP1_RS30485
subclass of: SO_0000673
so part of: SGP1_RS30485
location: complement(177415..179223)
location: region:177415-179223:-1
so has part: feature:177415-179223:-1:exon

WP_158302299.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:177415-179223:-1:exon

SGP1_RS34840
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS34840
so part of: sequence
location: 179715..179840
location: region:179715-179840:1
so has part: feature:179715-179840:1:exon
subclass of: SO_0000010

position:179715:1
position: 179715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179840:1
position: 179840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179715-179840:1:exon

SGP1_RS34840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS34840
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSVPLGELAEFGFMPAGQRIGEHEGVALAGLGLTVTEITPT
SIO_010081: SGP1_RS34840
subclass of: SO_0000673
so part of: SGP1_RS34840
location: 179715..179840
location: region:179715-179840:1
so has part: feature:179715-179840:1:exon

WP_279379418.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:179715-179840:1:exon

SGP1_RS00925
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00925
so part of: sequence
location: 182000..182215
location: region:182000-182215:1
so has part: feature:182000-182215:1:exon
subclass of: SO_0000010

position:182000:1
position: 182000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182215:1
position: 182215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182000-182215:1:exon

SGP1_RS00925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00925
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLRIKKNMAACAFGGYDFDACTPRAVRKLTDHLPRYAAFSYQTASHTPQSPRIRLVVAFSRLVHPDASGSV
SIO_010081: SGP1_RS00925
subclass of: SO_0000673
so part of: SGP1_RS00925
location: 182000..182215
location: region:182000-182215:1
so has part: feature:182000-182215:1:exon

WP_041866507.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:182000-182215:1:exon

SGP1_RS22985
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS22985
so part of: sequence
location: 182525..182770
location: region:182525-182770:1
so has part: feature:182525-182770:1:exon
subclass of: SO_0000010

position:182525:1
position: 182525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182770:1
position: 182770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182525-182770:1:exon

SGP1_RS22985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS22985
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEEVAAKRWDALKASTTNCRAIFNDAQDLGWVNRGAYHLRAQLVEKKMAASQRGALLAEYYGDVRLKACGEMVHRYNGQIW
SIO_010081: SGP1_RS22985
subclass of: SO_0000673
so part of: SGP1_RS22985
location: 182525..182770
location: region:182525-182770:1
so has part: feature:182525-182770:1:exon

WP_050747312.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:182525-182770:1:exon

SGP1_RS22990
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS22990
so part of: sequence
location: 182789..183478
location: region:182789-183478:1
so has part: feature:182789-183478:1:exon
subclass of: SO_0000010

position:182789:1
position: 182789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183478:1
position: 183478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182789-183478:1:exon

SGP1_RS22990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS22990
inference: COORDINATES: protein motif:HMM:NF020289.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRQMAQIFCENEATFSPRDITNAVDTMKWQIPLMGEASRHLVGFANGVYDLNAKTFRAHKAEDWLTTHNGISYTPPLPGETPKAHAPIAKSVKPLASRQCCLWYWQTAMTGSFFGGNRHRGGSGKSVFTGIATLLAGEHNAESGSMAALDSAREREPFVGKSLITLPDQVRYVGAGAGIKTVTGSDSVLIDPKHLKPYSLVLKAVVIIIDNEPMSFLLNGKRASPDAV
SIO_010081: SGP1_RS22990
subclass of: SO_0000673
so part of: SGP1_RS22990
location: 182789..183478
location: region:182789-183478:1
so has part: feature:182789-183478:1:exon

WP_050747313.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:182789-183478:1:exon

SGP1_RS32340
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS32340
so part of: sequence
location: 183617..183856
location: region:183617-183856:1
so has part: feature:183617-183856:1:exon
subclass of: SO_0000010

position:183617:1
position: 183617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183856:1
position: 183856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183617-183856:1:exon

SGP1_RS32340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS32340
inference: COORDINATES: protein motif:HMM:NF015259.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: primase-like DNA-binding domain-containing protein
translation: MLQRDSSEALAVKNINDTLYSFCEHLKALENANGIYMGNNRIPSDPRVYLYHAYLTYLEACRHQRPLTLTTFGRDCPSC
SIO_010081: SGP1_RS32340
subclass of: SO_0000673
so part of: SGP1_RS32340
location: 183617..183856
location: region:183617-183856:1
so has part: feature:183617-183856:1:exon

WP_243466313.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:183617-183856:1:exon

SGP1_RS34845
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS34845
so part of: sequence
location: 183850..183981
location: region:183850-183981:1
so has part: feature:183850-183981:1:exon
subclass of: SO_0000010

position:183850:1
position: 183850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183981:1
position: 183981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183850-183981:1:exon

SGP1_RS34845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS34845
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLKEYGTELKKDKKEKGVRYNLELTESAEEWLQDVAEDDTLAL
SIO_010081: SGP1_RS34845
subclass of: SO_0000673
so part of: SGP1_RS34845
location: 183850..183981
location: region:183850-183981:1
so has part: feature:183850-183981:1:exon

WP_279379419.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:183850-183981:1:exon

SGP1_RS28895
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS28895
pseudo: true
so part of: sequence
location: complement(<184541..>184629)
location: region:184541-184629:-1
so has part: feature:184541-184629:-1:exon
subclass of: SO_0000010

position:184541:-1
position: 184541
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:184629:-1
position: 184629
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184541-184629:-1:exon

SGP1_RS28895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS28895
inference: COORDINATES: similar to AA sequence:RefSeq:NP_462852.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: dienelactone hydrolase family protein
SIO_010081: SGP1_RS28895
subclass of: SO_0000673
so part of: SGP1_RS28895
location: complement(<184541..>184629)
location: region:184541-184629:-1
so has part: feature:184541-184629:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:184541-184629:-1:exon

SGP1_RS00935
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: udp
locus tag: SGP1_RS00935
old locus tag: SG0107
so part of: sequence
location: 185012..185779
location: region:185012-185779:1
so has part: feature:185012-185779:1:exon
subclass of: SO_0000010

position:185012:1
position: 185012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185779:1
position: 185779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185012-185779:1:exon

SGP1_RS00935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: udp
locus tag: SGP1_RS00935
old locus tag: SG0107
EC number: 2.4.2.3
inference: COORDINATES: similar to AA sequence:RefSeq:NP_312788.1
GO function: GO:0016763 - pentosyltransferase activity [Evidence IEA]
GO process: GO:0009116 - nucleoside metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: uridine phosphorylase
translation: MERSDVFHLGLTFSDLAGATLAIVPGDPQRVEKIARLMTNPVHLATHREFTTWRAELEGKSVVVCSTGIGGPSTSIAVEELSQLGIRTFLRVGTTGAIQNAINVGDVLVTTAAVRLDGASQHFAPLAFPAVADFACTTALVQAAKQRGARLHVGVTASSDTFYPGQERYDTYSGGVVRQFKGSLQEWQGMGVMNYEMESATLLTMCATQGLRAGMVAGVIVNRLQQETPDVAALQQTESDAVTIVVEASRLLFTV
SIO_010081: SGP1_RS00935
subclass of: SO_0000673
so part of: SGP1_RS00935
location: 185012..185779
location: region:185012-185779:1
so has part: feature:185012-185779:1:exon

WP_011409972.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:185012-185779:1:exon

SGP1_RS32345
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS32345
pseudo: true
so part of: sequence
location: 185776..186273
location: region:185776-186273:1
so has part: feature:185776-186273:1:exon
subclass of: SO_0000010

position:185776:1
position: 185776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186273:1
position: 186273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185776-186273:1:exon

SGP1_RS32345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS32345
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004934438.1
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DedA family protein
SIO_010081: SGP1_RS32345
subclass of: SO_0000673
so part of: SGP1_RS32345
location: 185776..186273
location: region:185776-186273:1
so has part: feature:185776-186273:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:185776-186273:1:exon

SGP1_RS00945
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: rmuC
locus tag: SGP1_RS00945
old locus tag: SG0108
so part of: sequence
location: 186340..187935
location: region:186340-187935:1
so has part: feature:186340-187935:1:exon
subclass of: SO_0000010

position:186340:1
position: 186340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187935:1
position: 187935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186340-187935:1:exon

SGP1_RS00945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: rmuC
locus tag: SGP1_RS00945
old locus tag: SG0108
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006709476.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA recombination protein RmuC
translation: MDYSLFYGIGGALIGVGVGWLIAGTRLHQRHLAQEAERVSLEQGLQAARQALADEQNIRRQAELATREGECEQRDLFGRLAAAEARLTSLAHFRQECEQLNQELRAQREINSSQKAELREVAIRLEETRLGAEEKQRLLMNSEQRLSAQFENLANRIFEHSGRKVDEQNRQSLDRLLMPLREQLEGFRRQVQDSFGQEARERHTLAHEIRNLQQLNAQMAQEAVNLTRALKGDNKAQGNWGEVVLSRVLEASGLREGHEFETQISIQQGDGRRLQPDVVVRLPQGKDVVIDAKMSLVAYERYFNSDNDAERQLALAEHVNSLRAHMKLLGRKDYQQLPGLRSLDYVLMFVPIEPAFMVAISRQPELISEALAHNIMLVSPTTLLVALRTINNLWRYEHQSRNAQHIAERAARLYDKLRLFVDDINAIGQSLDKAQASYRLAKNKLSDGRGNIIGQAEGFRALGVEIKRPIASAPGVHVPFADRPGEATAAVTDLPTAGAPQQEEERDSPTDGARDGSGPSRQPREECPLRE
SIO_010081: SGP1_RS00945
subclass of: SO_0000673
so part of: SGP1_RS00945
location: 186340..187935
location: region:186340-187935:1
so has part: feature:186340-187935:1:exon

WP_011409973.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:186340-187935:1:exon

SGP1_RS00950
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: ubiE
locus tag: SGP1_RS00950
old locus tag: SG0109
so part of: sequence
location: 188006..188764
location: region:188006-188764:1
so has part: feature:188006-188764:1:exon
subclass of: SO_0000010

position:188006:1
position: 188006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188764:1
position: 188764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188006-188764:1:exon

SGP1_RS00950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: ubiE
locus tag: SGP1_RS00950
old locus tag: SG0109
EC number: 2.1.1.163
EC number: 2.1.1.201
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019080147.1
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE
translation: MADDDKRETTHFGYRTVAKDQKALMVADVFHSVAAKYDLMNDLMSFGIHRIWKRFTIQCSGVRPGQKVLDLAGGTGDMTAKFSRLVGEDGEVVLADINDSMLKVGLEKLRNRGILGNVSYVQANAEALPFPDDTFDCITISFGLRNVTEKEQALKSMYRVLKPGGRLLILEFSTPRFKPLKKAYDLYSFHVLPRIGEMVARDAGSYRYLAESIRMHPDQETLKSMMLDAGFDSAEYFNMTGGIVALHRGYKF
SIO_010081: SGP1_RS00950
subclass of: SO_0000673
so part of: SGP1_RS00950
location: 188006..188764
location: region:188006-188764:1
so has part: feature:188006-188764:1:exon

WP_011409974.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:188006-188764:1:exon

SGP1_RS00955
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS00955
old locus tag: SG0110
so part of: sequence
location: 188777..189385
location: region:188777-189385:1
so has part: feature:188777-189385:1:exon
subclass of: SO_0000010

position:188777:1
position: 188777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189385:1
position: 189385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188777-189385:1:exon

SGP1_RS00955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS00955
old locus tag: SG0110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014888532.1
GO function: GO:0032934 - sterol binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SCP2 domain-containing protein
translation: MLLMPLISATLEVVLERLLYQDRAMSAARERLKGKVLRFELAEWETPVILVFGERQVDVLNAWDGAADCTVRTRLATLPALRERQQLTQLIKQGFLDVEGDLQCLQQFAALLDMAEFDGAELLAPWIGDIAAESVSRTVARWLTSTPRLLRTGQGRVMQAITDEWRLAPSALEQAWFCGEVDEVTRAGENLAARLEKLEASR
SIO_010081: SGP1_RS00955
subclass of: SO_0000673
so part of: SGP1_RS00955
location: 188777..189385
location: region:188777-189385:1
so has part: feature:188777-189385:1:exon

WP_011409975.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:188777-189385:1:exon

SGP1_RS00960
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: ubiB
locus tag: SGP1_RS00960
old locus tag: SG0111
so part of: sequence
location: 189382..191016
location: region:189382-191016:1
so has part: feature:189382-191016:1:exon
subclass of: SO_0000010

position:189382:1
position: 189382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191016:1
position: 191016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189382-191016:1:exon

SGP1_RS00960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: ubiB
locus tag: SGP1_RS00960
old locus tag: SG0111
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004957665.1
GO process: GO:0006744 - ubiquinone biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ubiquinone biosynthesis regulatory protein kinase UbiB
translation: MIFGELRRLYLIIGVMLSYGLDELIPKTRLTLPLRLGRNLLFWMPNNHAQRMLGERLRLALQELGPVWIKFGQMLSTRRDLFPPAIADQLAMLQDRVQPFDGALARAHIERSMGQPLETWFDDFQQEPLASASIAQVHTARLKNGQEVVIKVIRPDILPMIKADMRLMYRLASWVPHLLPDGRRLRPVEVVLEYEKTLLDELNLLREAANAIQLRRNFDGSPMLYIPEVYPDYCSETMMVMERIYGVPVNDVAALEKQGTNMKLLAERGVQVFFTQVFRDSFFHGDMHPGNIFVSFEHPENPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPPDTNVEDFEFAIRTVCEPIFEKPLAEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYIEGVGRQLYPQLDLWKTAKPFLEEWIKDQMGLPAILRALKEKAPYWAEKLPELPELVYDGFKQHRLLQKSVDRLTVEMRVHHVRQSQSRFLFGIGATLLLIGTFLMTQGADEGSLPAWLMAAGTVSWIIGWKRTA
SIO_010081: SGP1_RS00960
subclass of: SO_0000673
so part of: SGP1_RS00960
location: 189382..191016
location: region:189382-191016:1
so has part: feature:189382-191016:1:exon

WP_011409976.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:189382-191016:1:exon

SGP1_RS00965
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: tatA
locus tag: SGP1_RS00965
old locus tag: SG0112
so part of: sequence
location: 191067..191333
location: region:191067-191333:1
so has part: feature:191067-191333:1:exon
subclass of: SO_0000010

position:191067:1
position: 191067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191333:1
position: 191333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191067-191333:1:exon

SGP1_RS00965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: tatA
locus tag: SGP1_RS00965
old locus tag: SG0112
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011409977.1
GO process: GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: twin-arginine translocase TatA/TatE family subunit
translation: MGGISITQLLIIASIVVVLFGTKKLRGLGSDLGASIKGFKKSMSEDDNTTSTSSDKSSQDADFTAPPIEPKANLACPDEAKNKDKEHV
SIO_010081: SGP1_RS00965
subclass of: SO_0000673
so part of: SGP1_RS00965
location: 191067..191333
location: region:191067-191333:1
so has part: feature:191067-191333:1:exon

WP_011409977.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:191067-191333:1:exon

SGP1_RS26200
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: tatB
locus tag: SGP1_RS26200
old locus tag: SG0113
so part of: sequence
location: 191337..192035
location: region:191337-192035:1
so has part: feature:191337-192035:1:exon
subclass of: SO_0000010

position:191337:1
position: 191337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192035:1
position: 192035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191337-192035:1:exon

SGP1_RS26200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: tatB
locus tag: SGP1_RS26200
old locus tag: SG0113
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012814924.1
GO process: GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Sec-independent protein translocase protein TatB
translation: MFDIGFGELMLLFVIGLVVLGPERLPVAVRTVTGWIRAIRSMASTVQNELTQELKLQELQDSLKKVEEASKNNLSPELKASMEELREAAESMKKYFKGINSAALDPTEPHTIHNPLVTDPEALHDGVTPAEGDRQAEAPLMAPSVKASAPADSVANPGEPIAAAAIGQPAAASVDAASTSPSAKVSAPADSAANLATQAATPAAPAPAPEEPGRAATATGPASSTSPLNNDR
SIO_010081: SGP1_RS26200
subclass of: SO_0000673
so part of: SGP1_RS26200
location: 191337..192035
location: region:191337-192035:1
so has part: feature:191337-192035:1:exon

WP_011409978.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:191337-192035:1:exon

SGP1_RS00975
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: tatC
locus tag: SGP1_RS00975
old locus tag: SG0114
so part of: sequence
location: 192039..192809
location: region:192039-192809:1
so has part: feature:192039-192809:1:exon
subclass of: SO_0000010

position:192039:1
position: 192039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192809:1
position: 192809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192039-192809:1:exon

SGP1_RS00975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: tatC
locus tag: SGP1_RS00975
old locus tag: SG0114
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013811108.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Sec-independent protein translocase subunit TatC
translation: MAVDDTQPLISHLIELRKRLLYCILSVLVVFLALIYFANDIYQLISAPLIKQLPVGASMIATDVASPFFTPIKLTIIVSVFVSAPLLLYQVWAFVAPALYKHERRLMMPLLFSSTLLFYAGMAFAYFVVFPLAFSFFAHTAPRGVLIATDINNYLDFVMALFMAFGVSFEVPVAIVLLCWSGVVTPEDLRKKRPYVLVGAFVIGMLLTPPDVFSQTLLAIPMYLLFEIGFFFARFYVGKGRKRDEERGRSRGDEPE
SIO_010081: SGP1_RS00975
subclass of: SO_0000673
so part of: SGP1_RS00975
location: 192039..192809
location: region:192039-192809:1
so has part: feature:192039-192809:1:exon

WP_011409979.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:192039-192809:1:exon

SGP1_RS00980
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: rfaH
locus tag: SGP1_RS00980
old locus tag: SG0115
so part of: sequence
location: complement(192914..193405)
location: region:192914-193405:-1
so has part: feature:192914-193405:-1:exon
subclass of: SO_0000010

position:192914:-1
position: 192914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193405:-1
position: 193405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192914-193405:-1:exon

SGP1_RS00980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: rfaH
locus tag: SGP1_RS00980
old locus tag: SG0115
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012004725.1
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription/translation regulatory transformer protein RfaH
translation: MEAWYLLYCKRGQLLRAKEHLERQAVACLTPMVTLEKIIRGKRTETCEPLFPNYLFIEFDPETIHTTTISATRGVSHFVRFGSLPVIIPSAVINDLREHSFDNVTDPETPLSGDKVLITTGVFEGLQAIYTEPDGEARSMLLLNLLNKQVYQSLDNRLFQKMQ
SIO_010081: SGP1_RS00980
subclass of: SO_0000673
so part of: SGP1_RS00980
location: complement(192914..193405)
location: region:192914-193405:-1
so has part: feature:192914-193405:-1:exon

WP_011409980.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:192914-193405:-1:exon

SGP1_RS00985
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: ubiD
locus tag: SGP1_RS00985
old locus tag: SG0116
so part of: sequence
location: 193589..195073
location: region:193589-195073:1
so has part: feature:193589-195073:1:exon
subclass of: SO_0000010

position:193589:1
position: 193589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195073:1
position: 195073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193589-195073:1:exon

SGP1_RS00985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: ubiD
locus tag: SGP1_RS00985
old locus tag: SG0116
EC number: 4.1.1.98
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011409981.1
GO function: GO:0016831 - carboxy-lyase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4-hydroxy-3-polyprenylbenzoate decarboxylase
translation: MKYRDLRDFLALLEQRGELKRISLPIDPYLEMTEIADRTLRAGGPALLFENPKGYTMPVLCNLFGTPERVALGMGQESVNALRDVGKLLAFLKEPEPPKGFRDLLDKAPQFRQVLHMPTKRLNSAPCQEQIWQGEDVDLGRIPIMHCWPGDAAPLITWGLTVTRGPHKERQNLGIYRQQVLGKNKVIMRWLSHRGGALDFQEWTQQNPGQRFPVAVALGADPATILAAVTPVPDTLSEYAFAGLLRGSKTKVVKCASCDLDVPASAEIVLEGYLETGETATEGPYGDHTGYYNETDSFPVFTITHITQRRDALYHSTYTGRPPDEPAVMGEALNEVFVPILQKQFPEIVDFYLPPEGCSYRLAVVTIKKQYAGHAKRVMMGVWSFLRQFMYTKFVIVCDDDINARNWKDVIWAMTTRMDPARDTVLMENTPIDYLDFASPVSGLGSKMGMDATNKWPGETQREWGTPIEMDRTVRARVDAIWDQLAILNNGHES
SIO_010081: SGP1_RS00985
subclass of: SO_0000673
so part of: SGP1_RS00985
location: 193589..195073
location: region:193589-195073:1
so has part: feature:193589-195073:1:exon

WP_011409981.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:193589-195073:1:exon

SGP1_RS00990
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: fre
locus tag: SGP1_RS00990
old locus tag: SG0117
so part of: sequence
location: 195124..195825
location: region:195124-195825:1
so has part: feature:195124-195825:1:exon
subclass of: SO_0000010

position:195124:1
position: 195124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195825:1
position: 195825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195124-195825:1:exon

SGP1_RS00990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: fre
locus tag: SGP1_RS00990
old locus tag: SG0117
EC number: 1.5.1.41
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005224484.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)H-flavin reductase
translation: MTTLTCKVSSVDAITDTVYRVRLAPEAAFHFRAGQYLMVVMDERDKRPFSLASTPMETTFIELHIGASELNLYAMAVMDRILKEREITVEVPQGEAWLRDNTDRPIVLIAGGTGFSYARSILLTVLARQPERKVAIYWGGRERDHLYDLDGLEALTLLHPQLSVVPVVEQPDEYWQGRSGTVLMAVMQDYGSLEPYDIYIAGRFEMAKIARERFCAERSAVVERIFGDAFAFI
SIO_010081: SGP1_RS00990
subclass of: SO_0000673
so part of: SGP1_RS00990
location: 195124..195825
location: region:195124-195825:1
so has part: feature:195124-195825:1:exon

WP_011409982.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:195124-195825:1:exon

SGP1_RS00995
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: pepQ
locus tag: SGP1_RS00995
old locus tag: SG0118
so part of: sequence
location: 195935..197263
location: region:195935-197263:1
so has part: feature:195935-197263:1:exon
subclass of: SO_0000010

position:195935:1
position: 195935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197263:1
position: 197263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195935-197263:1:exon

SGP1_RS00995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: pepQ
locus tag: SGP1_RS00995
old locus tag: SG0118
EC number: 3.4.13.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019080135.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Xaa-Pro dipeptidase
translation: MESLSSLYRDHIATLQQRTREILQRQQLEGLLIHAGEPISRFLDDHDYPFKVNPQFKAWFPVTRVPHCWLWVDGVNKPKLWYYLSIDYWYLVEPLPDSFWTPYVDIVPFADPDEIAALLPPRDNVAYLGSSPHRASLLGMERDFINPQPVLDYLHYHRAYKTDYELACMREAQKSAVNGHRAAKEAFLSGMCEFDINIAYLSACGHRDTDVPYDNIIALNEHAAVLHYTRLDQHTPEHVMSFLIDAGTEYNGYAADLTRTYAAQKDSDFAALIAAMNSEQQALIATIETGVNYIDYHLQMHGRIAKLLKQFDILSGLSEDAMVTEGLTLPFLPHGLGHPLGLQVHDVAGFMQDDRGTSLAPQSRYTHLRCTRVLQPRMVLTIEPGLYFIESLLAPWRANTFGRHFNWSRIESFKPYGGIRIEDNIVIHDNHIENMTRALKLE
SIO_010081: SGP1_RS00995
subclass of: SO_0000673
so part of: SGP1_RS00995
location: 195935..197263
location: region:195935-197263:1
so has part: feature:195935-197263:1:exon

WP_011409983.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:195935-197263:1:exon

SGP1_RS01000
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01000
old locus tag: SG0119
pseudo: true
so part of: sequence
location: 197260..197825
location: region:197260-197825:1
so has part: feature:197260-197825:1:exon
subclass of: SO_0000010

position:197260:1
position: 197260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197825:1
position: 197825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197260-197825:1:exon

SGP1_RS01000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01000
old locus tag: SG0119
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015344213.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: YigZ family protein
SIO_010081: SGP1_RS01000
subclass of: SO_0000673
so part of: SGP1_RS01000
location: 197260..197825
location: region:197260-197825:1
so has part: feature:197260-197825:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:197260-197825:1:exon

SGP1_RS01005
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: trkH
locus tag: SGP1_RS01005
old locus tag: SG0120
so part of: sequence
location: 197869..199320
location: region:197869-199320:1
so has part: feature:197869-199320:1:exon
subclass of: SO_0000010

position:197869:1
position: 197869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199320:1
position: 199320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197869-199320:1:exon

SGP1_RS01005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: trkH
locus tag: SGP1_RS01005
old locus tag: SG0120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004146450.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Trk system potassium transporter TrkH
translation: MHFRTITRIVGLLVTLFSVTMIIPGLVALIYRDGAGSVFAQTFFCAQAIGLLLWFPNRRQKSELKSREGFLIVVLFWTVLGSVGALPFLFAEHPNLSVTDAFFESFSGLTTTGATALVGLDTLPHAILFYRQMLQWFGGMGIIVLAVAILPILGVGGMQLYRAEMPGPLKDNKMRPRIAETAKTLWLIYVALTIACALALWGAGMPAFDAISHSFSTIAIGGFSTHDASIGYYHSPLINTIVAIFLLISGCNYGLHFAALSGRNLKVYWRDPEFRMFIAVQLTLVVVCILILWRYDVYANSLQTLNQAFFQVVSMATTAGFTTDGIAQWPLFLPILLLCSAFIGGCAGSTGGGLKVIRILLLYLQGSRELKRLVHPNAVYTIKLGNRALPERILEAVWGFFSAYALVFILSMVAVVATGVDNFSAFAAVAATLNNLGPGLGVVADNFTSMNAVAKWILILTMLFGRLEVFTLLVLFTPTFWRE
SIO_010081: SGP1_RS01005
subclass of: SO_0000673
so part of: SGP1_RS01005
location: 197869..199320
location: region:197869-199320:1
so has part: feature:197869-199320:1:exon

WP_011409985.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:197869-199320:1:exon

SGP1_RS01010
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: hemG
locus tag: SGP1_RS01010
old locus tag: SG0121
so part of: sequence
location: 199334..199882
location: region:199334-199882:1
so has part: feature:199334-199882:1:exon
subclass of: SO_0000010

position:199334:1
position: 199334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199882:1
position: 199882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199334-199882:1:exon

SGP1_RS01010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: hemG
locus tag: SGP1_RS01010
old locus tag: SG0121
EC number: 1.3.5.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012882953.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: menaquinone-dependent protoporphyrinogen IX dehydrogenase
translation: MKTLILYLSHDGQTHKIARAITAHLTDCCECDVVDLHLAQDLDLQRYQRVVVGAAIRYGRFAADLDHFIAQQLEWLHSIPSAFYAVNLTARKPDKRTPSTNVYTRKFLAKTPWRPDLCAVFAGALCYPRYSWFDRVMIQMIMRMTGGETDRTKEVEYTDWQQVSAFAGDLAQLTAKQAPPRP
SIO_010081: SGP1_RS01010
subclass of: SO_0000673
so part of: SGP1_RS01010
location: 199334..199882
location: region:199334-199882:1
so has part: feature:199334-199882:1:exon

WP_011409986.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:199334-199882:1:exon

SGP1_RS01015
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01015
old locus tag: SG16SrRNA01
so part of: sequence
location: 200244..201785
location: region:200244-201785:1
so has part: feature:200244-201785:1:exon
subclass of: SO_0000573

position:200244:1
position: 200244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201785:1
position: 201785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200244-201785:1:exon

SGP1_RS01015
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 343509
locus tag: SGP1_RS01015
old locus tag: SG16SrRNA01
product: 16S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00177
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: SGP1_RS01015
subclass of: SO_0000673
so part of: SGP1_RS01015
location: 200244..201785
location: region:200244-201785:1
so has part: feature:200244-201785:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:200244-201785:1:exon

SGP1_RS01020
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01020
old locus tag: SGtRNA02
so part of: sequence
location: 201859..201935
location: region:201859-201935:1
so has part: feature:201859-201935:1:exon
subclass of: SO_0000663

position:201859:1
position: 201859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201935:1
position: 201935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201859-201935:1:exon

SGP1_RS01020
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 343509
locus tag: SGP1_RS01020
old locus tag: SGtRNA02
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:201893..201895,aa:Ile,seq:gat)
SIO_010081: SGP1_RS01020
subclass of: SO_0000673
so part of: SGP1_RS01020
location: 201859..201935
location: region:201859-201935:1
so has part: feature:201859-201935:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:201859-201935:1:exon

SGP1_RS01025
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01025
old locus tag: SGtRNA03
so part of: sequence
location: 202134..202209
location: region:202134-202209:1
so has part: feature:202134-202209:1:exon
subclass of: SO_0000663

position:202134:1
position: 202134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202209:1
position: 202209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202134-202209:1:exon

SGP1_RS01025
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 343509
locus tag: SGP1_RS01025
old locus tag: SGtRNA03
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:202167..202169,aa:Ala,seq:tgc)
SIO_010081: SGP1_RS01025
subclass of: SO_0000673
so part of: SGP1_RS01025
location: 202134..202209
location: region:202134-202209:1
so has part: feature:202134-202209:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:202134-202209:1:exon

SGP1_RS01030
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01030
old locus tag: SG23SrRNA01
so part of: sequence
location: 202457..205461
location: region:202457-205461:1
so has part: feature:202457-205461:1:exon
subclass of: SO_0000573

position:202457:1
position: 202457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205461:1
position: 205461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202457-205461:1:exon

SGP1_RS01030
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 343509
locus tag: SGP1_RS01030
old locus tag: SG23SrRNA01
product: 23S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02541
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: SGP1_RS01030
subclass of: SO_0000673
so part of: SGP1_RS01030
location: 202457..205461
location: region:202457-205461:1
so has part: feature:202457-205461:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:202457-205461:1:exon

SGP1_RS01035
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: rrf
locus tag: SGP1_RS01035
old locus tag: SG5SrRNA01
so part of: sequence
location: 205658..205773
location: region:205658-205773:1
so has part: feature:205658-205773:1:exon
subclass of: SO_0000573

position:205658:1
position: 205658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205773:1
position: 205773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205658-205773:1:exon

SGP1_RS01035
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 343509
gene: rrf
locus tag: SGP1_RS01035
old locus tag: SG5SrRNA01
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: SGP1_RS01035
subclass of: SO_0000673
so part of: SGP1_RS01035
location: 205658..205773
location: region:205658-205773:1
so has part: feature:205658-205773:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:205658-205773:1:exon

SGP1_RS01040
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01040
old locus tag: SG0122
so part of: sequence
location: 206335..206664
location: region:206335-206664:1
so has part: feature:206335-206664:1:exon
subclass of: SO_0000010

position:206335:1
position: 206335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206664:1
position: 206664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206335-206664:1:exon

SGP1_RS01040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01040
old locus tag: SG0122
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTIENNAKTFSTTVTNRCIGGMISTYKFLSAVGNKLTSAEKPADNAKSTPVAVHDAAIMRKNPLTPEDIAAAKEKMQATVNHFLTTDGKGFEQLLKQPWRWYTAKRSML
SIO_010081: SGP1_RS01040
subclass of: SO_0000673
so part of: SGP1_RS01040
location: 206335..206664
location: region:206335-206664:1
so has part: feature:206335-206664:1:exon

WP_148203326.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:206335-206664:1:exon

SGP1_RS01045
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01045
old locus tag: SG0123
so part of: sequence
location: 206753..207079
location: region:206753-207079:1
so has part: feature:206753-207079:1:exon
subclass of: SO_0000010

position:206753:1
position: 206753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207079:1
position: 207079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206753-207079:1:exon

SGP1_RS01045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01045
old locus tag: SG0123
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKCRDKDAEKNEEAKKNGKEVSEQDKIFIPTGAGMHPLISVFTGELFSRNVETPTDFDPIKQANDEIFTTFDNLAKQGHGQSPLPFREQLAQINKSWKELLDSTESDS
SIO_010081: SGP1_RS01045
subclass of: SO_0000673
so part of: SGP1_RS01045
location: 206753..207079
location: region:206753-207079:1
so has part: feature:206753-207079:1:exon

WP_011409988.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:206753-207079:1:exon

SGP1_RS01050
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: murB
locus tag: SGP1_RS01050
old locus tag: SG0124
so part of: sequence
location: 207220..208254
location: region:207220-208254:1
so has part: feature:207220-208254:1:exon
subclass of: SO_0000010

position:207220:1
position: 207220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208254:1
position: 208254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207220-208254:1:exon

SGP1_RS01050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: murB
locus tag: SGP1_RS01050
old locus tag: SG0124
EC number: 1.3.1.98
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001748081.1
GO function: GO:0071949 - FAD binding [Evidence IEA]; GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylmuramate dehydrogenase
translation: MTDSGALKPLNSFAIDVRARRVIAAYTEAELFTLWRQAADDATPVLVLGGGSNVLFLENYAGTVLLNRIAGVTIEECPDAWHLHVGAGEVWHDLVRTCLEQHMPGLENLALIPGCVGSAPIQNIGAYGVELRQFCDYVDVLQLATSTLRRLSAAECQFGYRDSIFKHALRERHAIVAVGLRLAKAWQPVLTYGVLARLDPQQATPRLIYDTVCAMRRTKLPGPALQGNAGSFFKNPVIDASRAERLLSRYPDAPHYPQPEGGVKLAAGWLIDRCGLKGYRLGGAAVHDKQALVLVNADNATGEDVAALARYVRQQVAERFAVWLEPEVRFIGAFGEVDAVGAIT
SIO_010081: SGP1_RS01050
subclass of: SO_0000673
so part of: SGP1_RS01050
location: 207220..208254
location: region:207220-208254:1
so has part: feature:207220-208254:1:exon

WP_041867322.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:207220-208254:1:exon

SGP1_RS01055
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: birA
locus tag: SGP1_RS01055
old locus tag: SG0125
so part of: sequence
location: 208251..209210
location: region:208251-209210:1
so has part: feature:208251-209210:1:exon
subclass of: SO_0000010

position:208251:1
position: 208251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209210:1
position: 209210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208251-209210:1:exon

SGP1_RS01055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: birA
locus tag: SGP1_RS01055
old locus tag: SG0125
EC number: 6.3.4.15
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017494312.1
GO function: GO:0004077 - biotin-[acetyl-CoA-carboxylase] ligase activity [Evidence IEA]
GO process: GO:0036211 - protein modification process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA
translation: MRDVTIPLKLISLLADGEFHSGEQFGAVLGMSRAAINKHIQTVRDWGVDVFTVPGKGYRLYAPLQLLDESVIRARLPAGRLAVLPVIDSTNQYLIERIGIAQPGDACVAEYQAQGRGRRGRQWISPFGNNLYLSLYWRLEQGPSAAGGLSLMVGIVMAEVLQRLGAEGVRVKWPNDLYLNDCKLAGILVEISGKAGDAAHVVIGAGINLAMREGAAGKIDQGWINLQEAGIAIDRNALAAELTDTLRQALWQFERDGFAPFVARWQALDNFFDRPVKLLIGEREIKGIARGIDAQGALLLDQEGKLHAYLGGEISLRGQ
SIO_010081: SGP1_RS01055
subclass of: SO_0000673
so part of: SGP1_RS01055
location: 208251..209210
location: region:208251-209210:1
so has part: feature:208251-209210:1:exon

WP_011409990.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:208251-209210:1:exon

SGP1_RS23000
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: pepE
locus tag: SGP1_RS23000
pseudo: true
so part of: sequence
location: complement(<209402..209994)
location: region:209402-209994:-1
so has part: feature:209402-209994:-1:exon
subclass of: SO_0000010

position:209402:-1
position: 209402
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:209994:-1
position: 209994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209402-209994:-1:exon

SGP1_RS23000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: pepE
locus tag: SGP1_RS23000
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006761745.1
GO function: GO:0008236 - serine-type peptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: dipeptidase PepE
SIO_010081: SGP1_RS23000
subclass of: SO_0000673
so part of: SGP1_RS23000
location: complement(<209402..209994)
location: region:209402-209994:-1
so has part: feature:209402-209994:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:209402-209994:-1:exon

SGP1_RS01065
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: coaA
locus tag: SGP1_RS01065
old locus tag: SG0126
so part of: sequence
location: complement(210405..211355)
location: region:210405-211355:-1
so has part: feature:210405-211355:-1:exon
subclass of: SO_0000010

position:210405:-1
position: 210405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211355:-1
position: 211355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210405-211355:-1:exon

SGP1_RS01065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: coaA
locus tag: SGP1_RS01065
old locus tag: SG0126
EC number: 2.7.1.33
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012004738.1
GO function: GO:0004594 - pantothenate kinase activity [Evidence IEA]
GO process: GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I pantothenate kinase
translation: MIKAVQSPPTPYLQFSRKQWAALRNSVPLTLTEAEIVNLKGINEDLSLEEVAEIYLPLSRLLNFYISSNLRRQAVLEQFLGTDGQRIPYIIGIAGSVAVGKSTTARVLQALLSRWPEHRTVELVTTDGFLHPNSVLKQRDLMKKKGFPESYDIRSLVNFVSKVKSGTPRVTAPVYSHLIYDVVPDEQKVISQPDILILEGLNVLQSGSDYNHDPHHVFVSDFVDFSIYVDAPETLLQSWYINRFLKFRQGAFSDPDSYFHHYSQLSEQEAVAIASQLWSEINGRNLQQNILPTRERASLILGKSANHAVERVRLRK
SIO_010081: SGP1_RS01065
subclass of: SO_0000673
so part of: SGP1_RS01065
location: complement(210405..211355)
location: region:210405-211355:-1
so has part: feature:210405-211355:-1:exon

WP_011409991.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:210405-211355:-1:exon

SGP1_RS01070
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01070
old locus tag: SGtRNA04
so part of: sequence
location: 211759..211834
location: region:211759-211834:1
so has part: feature:211759-211834:1:exon
subclass of: SO_0000663

position:211759:1
position: 211759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211834:1
position: 211834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211759-211834:1:exon

SGP1_RS01070
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 343509
locus tag: SGP1_RS01070
old locus tag: SGtRNA04
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:211792..211794,aa:Thr,seq:tgt)
SIO_010081: SGP1_RS01070
subclass of: SO_0000673
so part of: SGP1_RS01070
location: 211759..211834
location: region:211759-211834:1
so has part: feature:211759-211834:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:211759-211834:1:exon

SGP1_RS01075
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01075
old locus tag: SGtRNA05
so part of: sequence
location: 211845..211929
location: region:211845-211929:1
so has part: feature:211845-211929:1:exon
subclass of: SO_0000663

position:211845:1
position: 211845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211929:1
position: 211929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211845-211929:1:exon

SGP1_RS01075
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 343509
locus tag: SGP1_RS01075
old locus tag: SGtRNA05
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:211879..211881,aa:Tyr,seq:gta)
SIO_010081: SGP1_RS01075
subclass of: SO_0000673
so part of: SGP1_RS01075
location: 211845..211929
location: region:211845-211929:1
so has part: feature:211845-211929:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:211845-211929:1:exon

SGP1_RS01080
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01080
old locus tag: SGtRNA06
so part of: sequence
location: 212111..212185
location: region:212111-212185:1
so has part: feature:212111-212185:1:exon
subclass of: SO_0000663

position:212111:1
position: 212111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212185:1
position: 212185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212111-212185:1:exon

SGP1_RS01080
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 343509
locus tag: SGP1_RS01080
old locus tag: SGtRNA06
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:212144..212146,aa:Gly,seq:tcc)
SIO_010081: SGP1_RS01080
subclass of: SO_0000673
so part of: SGP1_RS01080
location: 212111..212185
location: region:212111-212185:1
so has part: feature:212111-212185:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:212111-212185:1:exon

SGP1_RS01085
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01085
old locus tag: SGtRNA07
so part of: sequence
location: 212190..212265
location: region:212190-212265:1
so has part: feature:212190-212265:1:exon
subclass of: SO_0000663

position:212190:1
position: 212190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212265:1
position: 212265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212190-212265:1:exon

SGP1_RS01085
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 343509
locus tag: SGP1_RS01085
old locus tag: SGtRNA07
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:212223..212225,aa:Thr,seq:ggt)
SIO_010081: SGP1_RS01085
subclass of: SO_0000673
so part of: SGP1_RS01085
location: 212190..212265
location: region:212190-212265:1
so has part: feature:212190-212265:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:212190-212265:1:exon

SGP1_RS01090
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: tuf
locus tag: SGP1_RS01090
old locus tag: SG0127
so part of: sequence
location: 212377..213561
location: region:212377-213561:1
so has part: feature:212377-213561:1:exon
subclass of: SO_0000010

position:212377:1
position: 212377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213561:1
position: 213561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212377-213561:1:exon

SGP1_RS01090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: tuf
locus tag: SGP1_RS01090
old locus tag: SG0127
inference: COORDINATES: similar to AA sequence:RefSeq:NP_312930.1
GO function: GO:0003746 - translation elongation factor activity [Evidence IEA]
GO process: GO:0006414 - translational elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: elongation factor Tu
translation: MSKEKFQRTKPHVNVGTIGHVDHGKTTLTAAITTVLAKAYGGSARAFDQIDNAPEEKARGITINTSHVEYDTPTRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMPQTREHILLGRQVGVPYIIVFMNKCDMVDDEELLELVEMEVRELLSQYDFPGDDTPVIRGSALKALEGDEAWTAKIIELAEALDSYIPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIVKVGEEVEIVGIKDTTKTTCTGVEMFRKLLDEGRAGENVGVLLRGTKRDDVERGQVLAKPGSIKPHTQFESEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEMVMPGDNIKMVVNLIAPIAMDDGLRFAIREGGRTVGAGVVAKVIA
SIO_010081: SGP1_RS01090
subclass of: SO_0000673
so part of: SGP1_RS01090
location: 212377..213561
location: region:212377-213561:1
so has part: feature:212377-213561:1:exon

WP_011409992.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:212377-213561:1:exon

SGP1_RS01095
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: secE
locus tag: SGP1_RS01095
old locus tag: SG0128
so part of: sequence
location: 213818..214201
location: region:213818-214201:1
so has part: feature:213818-214201:1:exon
subclass of: SO_0000010

position:213818:1
position: 213818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214201:1
position: 214201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213818-214201:1:exon

SGP1_RS01095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: secE
locus tag: SGP1_RS01095
old locus tag: SG0128
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: preprotein translocase subunit SecE
translation: MSANTEAQGSGRGLEVVKWLVVAILLVVAIVGNYYCRDYHLLLRALAVVLIIAIAGGVAMITAKGKSTVAFAREARTEVRKVIWPTRQETLHTTLIVAAVTAVMSLILWGLDGILVRVVSFITGLRF
SIO_010081: SGP1_RS01095
subclass of: SO_0000673
so part of: SGP1_RS01095
location: 213818..214201
location: region:213818-214201:1
so has part: feature:213818-214201:1:exon

WP_011409993.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:213818-214201:1:exon

SGP1_RS01100
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: nusG
locus tag: SGP1_RS01100
old locus tag: SG0129
so part of: sequence
location: 214203..214748
location: region:214203-214748:1
so has part: feature:214203-214748:1:exon
subclass of: SO_0000010

position:214203:1
position: 214203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214748:1
position: 214748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214203-214748:1:exon

SGP1_RS01100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: nusG
locus tag: SGP1_RS01100
old locus tag: SG0129
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004953928.1
GO process: GO:0006353 - DNA-templated transcription termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription termination/antitermination protein NusG
translation: MSEAPKKRWYVVQAFSGFEGRVAQSLREHIKLHDMEELFGEVMVPTEEVVEIRGGQRRKSERKFFPGYVLVQMVMNDASWHLVRSVPRVMGFIGGTSDRPAPISDKEVDAIMNRLQQVGDKPRPKTLFEPGELVRVNDGPFADFNGVVEEVDYEKSRLKVSVSIFGRATPVELDFGQVEKG
SIO_010081: SGP1_RS01100
subclass of: SO_0000673
so part of: SGP1_RS01100
location: 214203..214748
location: region:214203-214748:1
so has part: feature:214203-214748:1:exon

WP_009639145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:214203-214748:1:exon

SGP1_RS01105
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: rplK
locus tag: SGP1_RS01105
old locus tag: SG0130
so part of: sequence
location: 214882..215310
location: region:214882-215310:1
so has part: feature:214882-215310:1:exon
subclass of: SO_0000010

position:214882:1
position: 214882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215310:1
position: 215310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214882-215310:1:exon

SGP1_RS01105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: rplK
locus tag: SGP1_RS01105
old locus tag: SG0130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L11
translation: MAKKVQAYVKLQVAAGMANPSPPVGPALGQQGVNIMEFCKAFNAKTESIEKGLPIPVVITVYSDRSFTFVTKTPPAAVLLKKAAGIKSGSGKPNKDKVGKVTSAQVREIAETKAADMTGADVEAMSRSIAGTARSMGLVVED
SIO_010081: SGP1_RS01105
subclass of: SO_0000673
so part of: SGP1_RS01105
location: 214882..215310
location: region:214882-215310:1
so has part: feature:214882-215310:1:exon

WP_011409994.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:214882-215310:1:exon

SGP1_RS01110
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: rplA
locus tag: SGP1_RS01110
old locus tag: SG0131
so part of: sequence
location: 215314..216018
location: region:215314-216018:1
so has part: feature:215314-216018:1:exon
subclass of: SO_0000010

position:215314:1
position: 215314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216018:1
position: 216018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215314-216018:1:exon

SGP1_RS01110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: rplA
locus tag: SGP1_RS01110
old locus tag: SG0131
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011409995.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L1
translation: MAKLTKRMRVIRDKVDSTKQYDISEAVALLKELATAKFVESVDVAVNLGIDARKSDQNVRGATVLPHGTGRSVRVAVFTQGANAEAAKAAGADLVGMDDLADQIKKGEFNFDVVIASPDAMRVVGQLGQILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKVDFESDKLKENLEALLVALKKAKPTQAKGVYIKKVSLSTTMGAGVAVDQSGLSTTTA
SIO_010081: SGP1_RS01110
subclass of: SO_0000673
so part of: SGP1_RS01110
location: 215314..216018
location: region:215314-216018:1
so has part: feature:215314-216018:1:exon

WP_011409995.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:215314-216018:1:exon

SGP1_RS01115
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: rplJ
locus tag: SGP1_RS01115
old locus tag: SG0132
so part of: sequence
location: 216325..216822
location: region:216325-216822:1
so has part: feature:216325-216822:1:exon
subclass of: SO_0000010

position:216325:1
position: 216325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216822:1
position: 216822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:216325-216822:1:exon

SGP1_RS01115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: rplJ
locus tag: SGP1_RS01115
old locus tag: SG0132
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1
GO component: GO:0015934 - large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L10
translation: MALNLQDKQAIVAEVSEVAKGALSAVVADSRGVTVDKMTELRKAGREAGVYMRVVRNTLMRRVVEGTPFECLKDTFVGPTLIAFSNEHPGAAARLFKAFAKDNANFEVKAAAFEGEVISASQIDRLATLPTYEEAIARLMSAMKEASAGKLVRTLAALRDQKEAA
SIO_010081: SGP1_RS01115
subclass of: SO_0000673
so part of: SGP1_RS01115
location: 216325..216822
location: region:216325-216822:1
so has part: feature:216325-216822:1:exon

WP_011409996.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:216325-216822:1:exon

SGP1_RS01120
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: rplL
locus tag: SGP1_RS01120
old locus tag: SG0133
so part of: sequence
location: 216889..217257
location: region:216889-217257:1
so has part: feature:216889-217257:1:exon
subclass of: SO_0000010

position:216889:1
position: 216889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217257:1
position: 217257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:216889-217257:1:exon

SGP1_RS01120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: rplL
locus tag: SGP1_RS01120
old locus tag: SG0133
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004387079.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L7/L12
translation: MSITKEQILDAVAEMSVMDVVELISMMEEKFGVSAAAAVAVAAGGPAEAAEEKTEFDVVLSAIGANKVAVIKAVRGATGLGLKEAKDLVESAPATLKEGVSKDDAETLKKDLEQAGASVEVK
SIO_010081: SGP1_RS01120
subclass of: SO_0000673
so part of: SGP1_RS01120
location: 216889..217257
location: region:216889-217257:1
so has part: feature:216889-217257:1:exon

WP_011409997.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:216889-217257:1:exon

SGP1_RS01125
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: rpoB
locus tag: SGP1_RS01125
old locus tag: SG0134
so part of: sequence
location: 217585..221613
location: region:217585-221613:1
so has part: feature:217585-221613:1:exon
subclass of: SO_0000010

position:217585:1
position: 217585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221613:1
position: 221613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217585-221613:1:exon

SGP1_RS01125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: rpoB
locus tag: SGP1_RS01125
old locus tag: SG0134
EC number: 2.7.7.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1
GO component: GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO function: GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO process: GO:0006351 - DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-directed RNA polymerase subunit beta
translation: MVYSYTEKKRIRKDFGKRPQVLDVSYLLSIQLDSFQKFIERDPEGQYGLEAAFRSVFPIQSYSGNSELQYVSYRLGEPVFDVKECQIRGVTFSAPLRVKLRLIIYEREAPEGTVKDIKEQEVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYRGSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNYSTGQILDTFFDKVVYEIHDKKLQMELLPERLRGETASFDIEANGTVYVEKGRRITARHIRQLEKDGVAQIEVPVEYIIGKAVVKDYIDENTGEIIVPANMELTLDLLAKLSQAGHKRIETLFTNDLDHGAYISETLRVDPTSDRLSALVEIYRMMRPGEPPTREAAENLFENLFFSEDRYDLSAVGRMKFNRSLLREEIEGSGILSKDDIIEVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLSLGDLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRRVQDGVVTDEIHYLSAIEEGNFVIAQANTNLGDDGSFVDDLVTCRSKGESSLFSRDQVDYMDVSTQQVVSVGASLIPFLEHDDANRALMGANMQRQAVPTLCTDKPLVGTGMERAVAVDSGVTAVAKRGGTVQYVDASRIVINVNPDEMYPGEAGIDIYNLTKYIRSNQNTCISQTPCVSLGEPVERGDVLADGPSTDLGELALGQNMRIAFMPWNGYNFEDSMLVSERVVQEDRFTTIHIQELACVSRDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDLTEELQIFEAGLFARIRDVLISGGIEAEKLDKLTRERWLELGLADEEKQNQLEQLAEQYDELKHEFEKKLEAKRRKITQGDDLAPGVLKIVKVYLAVKRQIQPGDKMAGRHGNKGVISKINPIEDMPYDENGVPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQHEEVAKLREFIQKAYNLGDDVRQKVDLNTFSDEEVLRLAENLKKGMPIATPVFDGAKEKEIKELLQLGGLPTSGQITLFDGRTGEQFERQVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHMMEPGMPESFNVLLKEIRSLGINIELEED
SIO_010081: SGP1_RS01125
subclass of: SO_0000673
so part of: SGP1_RS01125
location: 217585..221613
location: region:217585-221613:1
so has part: feature:217585-221613:1:exon

WP_011409998.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:217585-221613:1:exon

SGP1_RS01130
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: rpoC
locus tag: SGP1_RS01130
old locus tag: SG0135
so part of: sequence
location: 221706..225926
location: region:221706-225926:1
so has part: feature:221706-225926:1:exon
subclass of: SO_0000010

position:221706:1
position: 221706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225926:1
position: 225926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221706-225926:1:exon

SGP1_RS01130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: rpoC
locus tag: SGP1_RS01130
old locus tag: SG0135
EC number: 2.7.7.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011409999.1
GO component: GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO function: GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO process: GO:0006351 - DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-directed RNA polymerase subunit beta'
translation: MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERYGLFCARIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSLPSRIGLLLDMPLRDIERVLYFESYVVVEGGMTNLERRQILTEEQYLDALEEFGDEFDAKMGAEAIQALLKNMDLEQECEQLREELEETNSETKRKKLTKRIKLLEAFVLSGNKPEWMILTVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQEAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHPVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEARALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRDRVNGKGEGMVLTGPKEAERIYRAGVAELHARVKVRITEHEKRDNGESVENTHLVDTTVGRAILWMIVPKGLPFSLVNQALGKKAISKMLNTCYRVLGLKPTVIFADQIMYTGFAYAARSGSSVGIDDMVIPAKKAEIIDEAEAEVAEIQEQFQSGLVTAGERYNKVIDIWAAANERVAKAMMDNLSTEAVINRDGEEERQVSFNSIFMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTFAGIVMTPVIEGGDVKEPLRERVLGRVTAEDVLKPGTADILVERNTLLNEKWCDVLEENSVDSVKVRSVVTCDTDFGVCANCYGRDLARGHLVNKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGTIRLSNAKFVVNGSGKLVITSRNTELKLVDEFGRTKESYKVPYGAVMAKGDGAEIMGGETVANWDPHTMPVITEVDGFVRFTDMIDGQTITRQTDELTGLSSIVILDTAERTSGGKDLRPALRIVDANGNDVLLPGTDMPAQYFLPGKTIVQLEDGAKITGGDTLARLPQETSGTKDITGGLPRVADLFEARRPKEPAILAEISGIVSFGKETKGKRRLVISPVDGSDAYEEMIPKWRQLNVFEGERVERGDVISDGPESPHDILRLRGVHAVTRYIVNEVQDVYRLQGVKINDKHIEVIVRQMLRKATIASSGSSEFLEGEQVEYSRIKIANRQLENDGKVEMTYVRDLLGITKASLATESFISAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQERARHRQQGEAPAAPQITADEASANLAELLNAGLGGNDD
SIO_010081: SGP1_RS01130
subclass of: SO_0000673
so part of: SGP1_RS01130
location: 221706..225926
location: region:221706-225926:1
so has part: feature:221706-225926:1:exon

WP_011409999.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:221706-225926:1:exon

SGP1_RS01135
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: thiH
locus tag: SGP1_RS01135
old locus tag: SG0136
pseudo: true
so part of: sequence
location: complement(226015..227157)
location: region:226015-227157:-1
so has part: feature:226015-227157:-1:exon
subclass of: SO_0000010

position:226015:-1
position: 226015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227157:-1
position: 227157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226015-227157:-1:exon

SGP1_RS01135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: thiH
locus tag: SGP1_RS01135
old locus tag: SG0136
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004388108.1
GO function: GO:0016829 - lyase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO process: GO:0009228 - thiamine biosynthetic process [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: 2-iminoacetate synthase ThiH
SIO_010081: SGP1_RS01135
subclass of: SO_0000673
so part of: SGP1_RS01135
location: complement(226015..227157)
location: region:226015-227157:-1
so has part: feature:226015-227157:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:226015-227157:-1:exon

SGP1_RS01140
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01140
pseudo: true
so part of: sequence
location: complement(<227180..227908)
location: region:227180-227908:-1
so has part: feature:227180-227908:-1:exon
subclass of: SO_0000010

position:227180:-1
position: 227180
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:227908:-1
position: 227908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227180-227908:-1:exon

SGP1_RS01140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000944065.1
GO function: GO:1990107 - thiazole synthase activity [Evidence IEA]
note: internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: thiazole synthase
SIO_010081: SGP1_RS01140
subclass of: SO_0000673
so part of: SGP1_RS01140
location: complement(<227180..227908)
location: region:227180-227908:-1
so has part: feature:227180-227908:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:227180-227908:-1:exon

SGP1_RS32350
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: thiS
locus tag: SGP1_RS32350
pseudo: true
so part of: sequence
location: complement(227912..228071)
location: region:227912-228071:-1
so has part: feature:227912-228071:-1:exon
subclass of: SO_0000010

position:227912:-1
position: 227912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228071:-1
position: 228071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227912-228071:-1:exon

SGP1_RS32350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: thiS
locus tag: SGP1_RS32350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004953956.1
GO process: GO:0009228 - thiamine biosynthetic process [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: sulfur carrier protein ThiS
SIO_010081: SGP1_RS32350
subclass of: SO_0000673
so part of: SGP1_RS32350
location: complement(227912..228071)
location: region:227912-228071:-1
so has part: feature:227912-228071:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:227912-228071:-1:exon

SGP1_RS01145
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01145
pseudo: true
so part of: sequence
location: complement(228068..228627)
location: region:228068-228627:-1
so has part: feature:228068-228627:-1:exon
subclass of: SO_0000010

position:228068:-1
position: 228068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228627:-1
position: 228627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228068-228627:-1:exon

SGP1_RS01145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01145
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013315940.1
GO function: GO:0008641 - ubiquitin-like modifier activating enzyme activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ThiF family adenylyltransferase
SIO_010081: SGP1_RS01145
subclass of: SO_0000673
so part of: SGP1_RS01145
location: complement(228068..228627)
location: region:228068-228627:-1
so has part: feature:228068-228627:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:228068-228627:-1:exon

SGP1_RS34850
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS34850
so part of: sequence
location: complement(228677..228802)
location: region:228677-228802:-1
so has part: feature:228677-228802:-1:exon
subclass of: SO_0000010

position:228677:-1
position: 228677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228802:-1
position: 228802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228677-228802:-1:exon

SGP1_RS34850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS34850
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLTCGVGSVAVGSAITRAPDWRQATTDLQQQISAWERDHER
SIO_010081: SGP1_RS34850
subclass of: SO_0000673
so part of: SGP1_RS34850
location: complement(228677..228802)
location: region:228677-228802:-1
so has part: feature:228677-228802:-1:exon

WP_279379426.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:228677-228802:-1:exon

SGP1_RS01155
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: rsd
locus tag: SGP1_RS01155
old locus tag: SG0137
pseudo: true
so part of: sequence
location: complement(<228904..229338)
location: region:228904-229338:-1
so has part: feature:228904-229338:-1:exon
subclass of: SO_0000010

position:228904:-1
position: 228904
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:229338:-1
position: 229338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228904-229338:-1:exon

SGP1_RS01155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: rsd
locus tag: SGP1_RS01155
old locus tag: SG0137
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007766582.1
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: sigma D regulator
SIO_010081: SGP1_RS01155
subclass of: SO_0000673
so part of: SGP1_RS01155
location: complement(<228904..229338)
location: region:228904-229338:-1
so has part: feature:228904-229338:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:228904-229338:-1:exon

SGP1_RS01160
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: nudC
locus tag: SGP1_RS01160
pseudo: true
so part of: sequence
location: 229446..230136
location: region:229446-230136:1
so has part: feature:229446-230136:1:exon
subclass of: SO_0000010

position:229446:1
position: 229446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230136:1
position: 230136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229446-230136:1:exon

SGP1_RS01160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: nudC
locus tag: SGP1_RS01160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019080244.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000210 - NAD+ diphosphatase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: NAD(+) diphosphatase
SIO_010081: SGP1_RS01160
subclass of: SO_0000673
so part of: SGP1_RS01160
location: 229446..230136
location: region:229446-230136:1
so has part: feature:229446-230136:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:229446-230136:1:exon

SGP1_RS01165
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: hemE
locus tag: SGP1_RS01165
old locus tag: SG0138
so part of: sequence
location: 230185..231249
location: region:230185-231249:1
so has part: feature:230185-231249:1:exon
subclass of: SO_0000010

position:230185:1
position: 230185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231249:1
position: 231249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230185-231249:1:exon

SGP1_RS01165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: hemE
locus tag: SGP1_RS01165
old locus tag: SG0138
EC number: 4.1.1.37
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004876779.1
GO function: GO:0004853 - uroporphyrinogen decarboxylase activity [Evidence IEA]
GO process: GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: uroporphyrinogen decarboxylase
translation: MSELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAEAGDFMSLCRNADLACEVTLQPLRRFPLDATILFSDILTVPDAMGLGLWFEQGEGPRFARPIQHRRDVEQLPIPDPEQELGYVMNAVRAIRQRLQGAVPLIGFSGSPWTLATYMVEGGSSKAFTKIKQMLYAEPETLHLLLDKLADSVVLYLNGQIRAGAQAVMLFDTWGGALTGADYREFSMHYMHKIVDGLLREQDGRRVPVTLFTKGGGQWLEAMAATGCDALGLDWSTDIADARRRVGDKVALQGNMDPSVLYGSPARIEREVATILDAFGPGEGHVFNLGHGIHQDVPPAHAGHFVAAVHRLSQSYHR
SIO_010081: SGP1_RS01165
subclass of: SO_0000673
so part of: SGP1_RS01165
location: 230185..231249
location: region:230185-231249:1
so has part: feature:230185-231249:1:exon

WP_011410002.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:230185-231249:1:exon

SGP1_RS01170
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: nfi
locus tag: SGP1_RS01170
old locus tag: SG0139
so part of: sequence
location: 231261..231956
location: region:231261-231956:1
so has part: feature:231261-231956:1:exon
subclass of: SO_0000010

position:231261:1
position: 231261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231956:1
position: 231956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231261-231956:1:exon

SGP1_RS01170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: nfi
locus tag: SGP1_RS01170
old locus tag: SG0139
EC number: 3.1.21.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410003.1
GO function: GO:0004519 - endonuclease activity [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: cleaves DNA at apurinic or apyrimidinic sites; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: deoxyribonuclease V
translation: MDIAVLRAEQIATEGKVIRHDDFAFSQPGLIAGADVGFEQGGEVTRAAIALLRFPSLELVEFQVARVTTTMPYIPGFLSFREYPALLAAWDKLGHRPDLLLVDGHGISHPRRLGVASHFGLLVDTPTIGVAKRRLCGKFAPLAEAQGALAPLMDKGEQLAWVWRSKLRCNPLFISTGHRVGLASALHWVQLCMRGYRLPEPTRWADAVASNRTAFKRWQQEREEADFFPPQ
SIO_010081: SGP1_RS01170
subclass of: SO_0000673
so part of: SGP1_RS01170
location: 231261..231956
location: region:231261-231956:1
so has part: feature:231261-231956:1:exon

WP_011410003.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:231261-231956:1:exon

SGP1_RS01175
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01175
old locus tag: SG0140
so part of: sequence
location: 232014..232604
location: region:232014-232604:1
so has part: feature:232014-232604:1:exon
subclass of: SO_0000010

position:232014:1
position: 232014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232604:1
position: 232604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232014-232604:1:exon

SGP1_RS01175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01175
old locus tag: SG0140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004957783.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YjaG family protein
translation: MLRNPIHLRLEKLASWQHITFMASLCERMYPNYQLFCQQTGFGDAAIFRRILALVWETLVVKDAKVNFDLQLEKLEEAIPAADDYDFYGVYPAIDACVALSEVLHSRLSGETLSHVITVSETSIRSVAMVEMTQAQREMTEEALNALPAIGQEWDVQWEIYRLLADCEDRDIELIKGLRADLREAGISNIGINLQQ
SIO_010081: SGP1_RS01175
subclass of: SO_0000673
so part of: SGP1_RS01175
location: 232014..232604
location: region:232014-232604:1
so has part: feature:232014-232604:1:exon

WP_011410004.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:232014-232604:1:exon

SGP1_RS01180
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: hupA
locus tag: SGP1_RS01180
old locus tag: SG0141
so part of: sequence
location: 232792..233064
location: region:232792-233064:1
so has part: feature:232792-233064:1:exon
subclass of: SO_0000010

position:232792:1
position: 232792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:233064:1
position: 233064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232792-233064:1:exon

SGP1_RS01180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: hupA
locus tag: SGP1_RS01180
old locus tag: SG0141
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleoid-associated protein HU-alpha
translation: MNKTQLIDVIADKADLSKAQAKSALESTLAAITESLKEGDAVQLVGFGTFKINHRSERTGRNPQTGKEIKIAAANVPVFVSGKALKDAVK
SIO_010081: SGP1_RS01180
subclass of: SO_0000673
so part of: SGP1_RS01180
location: 232792..233064
location: region:232792-233064:1
so has part: feature:232792-233064:1:exon

WP_011410005.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:232792-233064:1:exon

SGP1_RS01185
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01185
pseudo: true
so part of: sequence
location: 233072..233782
location: region:233072-233782:1
so has part: feature:233072-233782:1:exon
subclass of: SO_0000010

position:233072:1
position: 233072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:233782:1
position: 233782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233072-233782:1:exon

SGP1_RS01185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01185
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007704743.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF1481 domain-containing protein
SIO_010081: SGP1_RS01185
subclass of: SO_0000673
so part of: SGP1_RS01185
location: 233072..233782
location: region:233072-233782:1
so has part: feature:233072-233782:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:233072-233782:1:exon

SGP1_RS01190
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: purD
locus tag: SGP1_RS01190
old locus tag: SG0142
so part of: sequence
location: complement(233755..235038)
location: region:233755-235038:-1
so has part: feature:233755-235038:-1:exon
subclass of: SO_0000010

position:233755:-1
position: 233755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235038:-1
position: 235038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233755-235038:-1:exon

SGP1_RS01190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: purD
locus tag: SGP1_RS01190
old locus tag: SG0142
EC number: 6.3.4.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015344241.1
GO function: GO:0004637 - phosphoribosylamine-glycine ligase activity [Evidence IEA]
GO process: GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoribosylamine--glycine ligase
translation: MNILIIGNGGREHSLAWKAAQSTLADNVYVAPGNAGTALEPALQNVDIAATDIPALVAFAREQHIGLTIVGPEAPLVQGVVDAFRAADLKIFGPTQAAAQLEGSKAFSKDFLARHGIPTARYENFTEVAPALDYVRQQGAPIVIKADGLAAGKGVIVAMTQVEAESAVNDMLAGNAFGDAGHRIVIEEFLDGEEASFIVMVDGEHVLPMATSQDHKRVGDGDTGPNTGGMGAYSPAPVVTDEVHRRVMEQVIWPTVKGMAAEGNVYTGFLYAGLMISPDGQPKVIEFNCRFGDPETQPIMLRMRSDLVAHCLAATEGRLNEERSEWDERPALGVVLAAGGYPGDYLTGDEISGLPATEAEGEKIFHAGTRLHQGKVLTQGGRVLCITALGATVADAQAKAYRAAQAVQWRESFCRRDIGYRAIARDV
SIO_010081: SGP1_RS01190
subclass of: SO_0000673
so part of: SGP1_RS01190
location: complement(233755..235038)
location: region:233755-235038:-1
so has part: feature:233755-235038:-1:exon

WP_011410006.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:233755-235038:-1:exon

SGP1_RS01195
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: purH
locus tag: SGP1_RS01195
old locus tag: SG0143
so part of: sequence
location: complement(235058..236647)
location: region:235058-236647:-1
so has part: feature:235058-236647:-1:exon
subclass of: SO_0000010

position:235058:-1
position: 235058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236647:-1
position: 236647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235058-236647:-1:exon

SGP1_RS01195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: purH
locus tag: SGP1_RS01195
old locus tag: SG0143
EC number: 2.1.2.3
EC number: 3.5.4.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1
GO function: GO:0003937 - IMP cyclohydrolase activity [Evidence IEA]; GO:0004643 - phosphoribosylaminoimidazolecarboxamide formyltransferase activity [Evidence IEA]
GO process: GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
translation: MQPPRPVRRALLSVSDKTGILAFARSLSERGVELLSTGGTARLLAEAGLPVTEVSDYTGFPEMMDGRVKTLHPKVHGGILGRRDIDDAIMREHDIAPIDMVVVNLYPFAATVARAECTREEAVENIDIGGPTMVRSAAKNHKDVAIVVNSANYPAVVAEMDQHSGSLTLETRFDLAIKAFEHTAAYDSMIANYFGSQVPAYHGDAKQPSGRFPRTLNLNFIKKQDMRYGENSHQMAAFYTDPETPEASVATAQQLQGKALSYNNIADTDAALECVKTFTEAACVIVKHANPCGVATSDTLLAAYNRAYQTDPTSAFGGIIAFNRPLDADTAKAIVSRQFVEVIIAPAVDDDALGVLAGKQNVRVLACGNLQQPSPGLDFKRVNGGLLVQERDVGMVDLQDLSVVTERQPTEEEMRDALFCWKVAKFVKSNAIVYARYQRTIGIGAGQMSRVYSAKIAGIKAADEGLDVKGSAMASDAFFPFRDGIDAAAAVGVRCVIQPGGSIHDNEIIAAANEHGIAMIFTHMRHFRH
SIO_010081: SGP1_RS01195
subclass of: SO_0000673
so part of: SGP1_RS01195
location: complement(235058..236647)
location: region:235058-236647:-1
so has part: feature:235058-236647:-1:exon

WP_011410007.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:235058-236647:-1:exon

SGP1_RS01200
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01200
old locus tag: SG16SrRNA02
so part of: sequence
location: 237198..238739
location: region:237198-238739:1
so has part: feature:237198-238739:1:exon
subclass of: SO_0000573

position:237198:1
position: 237198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:238739:1
position: 238739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237198-238739:1:exon

SGP1_RS01200
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 343509
locus tag: SGP1_RS01200
old locus tag: SG16SrRNA02
product: 16S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00177
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: SGP1_RS01200
subclass of: SO_0000673
so part of: SGP1_RS01200
location: 237198..238739
location: region:237198-238739:1
so has part: feature:237198-238739:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:237198-238739:1:exon

SGP1_RS01205
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01205
old locus tag: SGtRNA08
so part of: sequence
location: 238813..238889
location: region:238813-238889:1
so has part: feature:238813-238889:1:exon
subclass of: SO_0000663

position:238813:1
position: 238813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:238889:1
position: 238889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238813-238889:1:exon

SGP1_RS01205
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 343509
locus tag: SGP1_RS01205
old locus tag: SGtRNA08
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:238847..238849,aa:Ile,seq:gat)
SIO_010081: SGP1_RS01205
subclass of: SO_0000673
so part of: SGP1_RS01205
location: 238813..238889
location: region:238813-238889:1
so has part: feature:238813-238889:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:238813-238889:1:exon

SGP1_RS01210
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01210
old locus tag: SGtRNA09
so part of: sequence
location: 239088..239163
location: region:239088-239163:1
so has part: feature:239088-239163:1:exon
subclass of: SO_0000663

position:239088:1
position: 239088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239163:1
position: 239163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239088-239163:1:exon

SGP1_RS01210
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 343509
locus tag: SGP1_RS01210
old locus tag: SGtRNA09
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:239121..239123,aa:Ala,seq:tgc)
SIO_010081: SGP1_RS01210
subclass of: SO_0000673
so part of: SGP1_RS01210
location: 239088..239163
location: region:239088-239163:1
so has part: feature:239088-239163:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:239088-239163:1:exon

SGP1_RS01215
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01215
old locus tag: SG23SrRNA02
so part of: sequence
location: 239411..242415
location: region:239411-242415:1
so has part: feature:239411-242415:1:exon
subclass of: SO_0000573

position:239411:1
position: 239411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242415:1
position: 242415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239411-242415:1:exon

SGP1_RS01215
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 343509
locus tag: SGP1_RS01215
old locus tag: SG23SrRNA02
product: 23S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02541
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: SGP1_RS01215
subclass of: SO_0000673
so part of: SGP1_RS01215
location: 239411..242415
location: region:239411-242415:1
so has part: feature:239411-242415:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:239411-242415:1:exon

SGP1_RS01220
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: rrf
locus tag: SGP1_RS01220
old locus tag: SG5SrRNA02
so part of: sequence
location: 242612..242727
location: region:242612-242727:1
so has part: feature:242612-242727:1:exon
subclass of: SO_0000573

position:242612:1
position: 242612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242727:1
position: 242727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242612-242727:1:exon

SGP1_RS01220
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 343509
gene: rrf
locus tag: SGP1_RS01220
old locus tag: SG5SrRNA02
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: SGP1_RS01220
subclass of: SO_0000673
so part of: SGP1_RS01220
location: 242612..242727
location: region:242612-242727:1
so has part: feature:242612-242727:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:242612-242727:1:exon

SGP1_RS01225
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01225
old locus tag: SGtRNA10
so part of: sequence
location: 242774..242849
location: region:242774-242849:1
so has part: feature:242774-242849:1:exon
subclass of: SO_0000663

position:242774:1
position: 242774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242849:1
position: 242849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242774-242849:1:exon

SGP1_RS01225
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 343509
locus tag: SGP1_RS01225
old locus tag: SGtRNA10
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:242807..242809,aa:Thr,seq:ggt)
SIO_010081: SGP1_RS01225
subclass of: SO_0000673
so part of: SGP1_RS01225
location: 242774..242849
location: region:242774-242849:1
so has part: feature:242774-242849:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:242774-242849:1:exon

SGP1_RS01230
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: rrf
locus tag: SGP1_RS01230
old locus tag: SG5SrRNA03
so part of: sequence
location: 242886..243001
location: region:242886-243001:1
so has part: feature:242886-243001:1:exon
subclass of: SO_0000573

position:242886:1
position: 242886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243001:1
position: 243001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242886-243001:1:exon

SGP1_RS01230
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 343509
gene: rrf
locus tag: SGP1_RS01230
old locus tag: SG5SrRNA03
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: SGP1_RS01230
subclass of: SO_0000673
so part of: SGP1_RS01230
location: 242886..243001
location: region:242886-243001:1
so has part: feature:242886-243001:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:242886-243001:1:exon

SGP1_RS01235
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01235
old locus tag: SG0144
pseudo: true
so part of: sequence
location: 243402..>244420
location: region:243402-244420:1
so has part: feature:243402-244420:1:exon
subclass of: SO_0000010

position:243402:1
position: 243402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244420:1
position: 244420
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243402-244420:1:exon

SGP1_RS01235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01235
old locus tag: SG0144
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016161363.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ROK family transcriptional regulator
SIO_010081: SGP1_RS01235
subclass of: SO_0000673
so part of: SGP1_RS01235
location: 243402..>244420
location: region:243402-244420:1
so has part: feature:243402-244420:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:243402-244420:1:exon

SGP1_RS01240
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01240
pseudo: true
so part of: sequence
location: complement(246358..247084)
location: region:246358-247084:-1
so has part: feature:246358-247084:-1:exon
subclass of: SO_0000010

position:246358:-1
position: 246358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247084:-1
position: 247084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246358-247084:-1:exon

SGP1_RS01240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008454928.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: amino acid ABC transporter ATP-binding protein
SIO_010081: SGP1_RS01240
subclass of: SO_0000673
so part of: SGP1_RS01240
location: complement(246358..247084)
location: region:246358-247084:-1
so has part: feature:246358-247084:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:246358-247084:-1:exon

SGP1_RS01245
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01245
pseudo: true
so part of: sequence
location: complement(247102..>247958)
location: region:247102-247958:-1
so has part: feature:247102-247958:-1:exon
subclass of: SO_0000010

position:247102:-1
position: 247102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247958:-1
position: 247958
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247102-247958:-1:exon

SGP1_RS01245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01245
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016943141.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO process: GO:0006865 - amino acid transport [Evidence IEA]
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: amino acid ABC transporter permease
SIO_010081: SGP1_RS01245
subclass of: SO_0000673
so part of: SGP1_RS01245
location: complement(247102..>247958)
location: region:247102-247958:-1
so has part: feature:247102-247958:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:247102-247958:-1:exon

SGP1_RS01250
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01250
pseudo: true
so part of: sequence
location: complement(248041..>248734)
location: region:248041-248734:-1
so has part: feature:248041-248734:-1:exon
subclass of: SO_0000010

position:248041:-1
position: 248041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248734:-1
position: 248734
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248041-248734:-1:exon

SGP1_RS01250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01250
inference: COORDINATES: similar to AA sequence:RefSeq:YP_026209.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ABC transporter permease subunit
SIO_010081: SGP1_RS01250
subclass of: SO_0000673
so part of: SGP1_RS01250
location: complement(248041..>248734)
location: region:248041-248734:-1
so has part: feature:248041-248734:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:248041-248734:-1:exon

SGP1_RS01255
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01255
pseudo: true
so part of: sequence
location: complement(248791..249687)
location: region:248791-249687:-1
so has part: feature:248791-249687:-1:exon
subclass of: SO_0000010

position:248791:-1
position: 248791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249687:-1
position: 249687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248791-249687:-1:exon

SGP1_RS01255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005121390.1
GO component: GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: amino acid ABC transporter substrate-binding protein
SIO_010081: SGP1_RS01255
subclass of: SO_0000673
so part of: SGP1_RS01255
location: complement(248791..249687)
location: region:248791-249687:-1
so has part: feature:248791-249687:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:248791-249687:-1:exon

SGP1_RS01260
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: cspA
locus tag: SGP1_RS01260
old locus tag: SG0145
so part of: sequence
location: 250290..250502
location: region:250290-250502:1
so has part: feature:250290-250502:1:exon
subclass of: SO_0000010

position:250290:1
position: 250290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:250502:1
position: 250502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250290-250502:1:exon

SGP1_RS01260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: cspA
locus tag: SGP1_RS01260
old locus tag: SG0145
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002210052.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA chaperone/antiterminator CspA
translation: MSNKVTGLVKWFDAGKGFGFITPADGSKDVFVHFSAIQSNDFKTLDEGQRVEFTIEQGQKGPSAANVVAL
SIO_010081: SGP1_RS01260
subclass of: SO_0000673
so part of: SGP1_RS01260
location: 250290..250502
location: region:250290-250502:1
so has part: feature:250290-250502:1:exon

WP_011410009.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:250290-250502:1:exon

SGP1_RS01265
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01265
pseudo: true
so part of: sequence
location: 251044..252629
location: region:251044-252629:1
so has part: feature:251044-252629:1:exon
subclass of: SO_0000010

position:251044:1
position: 251044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252629:1
position: 252629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251044-252629:1:exon

SGP1_RS01265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01265
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015834473.1
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
SIO_010081: SGP1_RS01265
subclass of: SO_0000673
so part of: SGP1_RS01265
location: 251044..252629
location: region:251044-252629:1
so has part: feature:251044-252629:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:251044-252629:1:exon

SGP1_RS01270
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01270
so part of: sequence
location: 252841..253155
location: region:252841-253155:1
so has part: feature:252841-253155:1:exon
subclass of: SO_0000010

position:252841:1
position: 252841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253155:1
position: 253155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252841-253155:1:exon

SGP1_RS01270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01270
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVAREADLHKYIDHVSMLKLRFWTGPLPELDKLYALLSLAPIAIACLYLLIRYSRPLLRDIMAHKSYAITTFVALIFIINILDRSLGEFKEMLGWHAPLWLVAL
SIO_010081: SGP1_RS01270
subclass of: SO_0000673
so part of: SGP1_RS01270
location: 252841..253155
location: region:252841-253155:1
so has part: feature:252841-253155:1:exon

WP_041866510.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:252841-253155:1:exon

SGP1_RS01275
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01275
so part of: sequence
location: complement(253469..253672)
location: region:253469-253672:-1
so has part: feature:253469-253672:-1:exon
subclass of: SO_0000010

position:253469:-1
position: 253469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:253672:-1
position: 253672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:253469-253672:-1:exon

SGP1_RS01275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01275
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLIQFRYAGRLIDDKMLQTQLSDIGIQVENDDDQPITFNSNNPLPSASFVLSGPTGPHGGTGAIWQI
SIO_010081: SGP1_RS01275
subclass of: SO_0000673
so part of: SGP1_RS01275
location: complement(253469..253672)
location: region:253469-253672:-1
so has part: feature:253469-253672:-1:exon

WP_041866511.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:253469-253672:-1:exon

SGP1_RS01280
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01280
so part of: sequence
location: complement(253727..253915)
location: region:253727-253915:-1
so has part: feature:253727-253915:-1:exon
subclass of: SO_0000010

position:253727:-1
position: 253727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:253915:-1
position: 253915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:253727-253915:-1:exon

SGP1_RS01280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01280
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQGRHYSLPALTLLAASQPVLRITPPKVTLTTSLCRITAKRIEVKFPQVVMTPTHNPRRCPR
SIO_010081: SGP1_RS01280
subclass of: SO_0000673
so part of: SGP1_RS01280
location: complement(253727..253915)
location: region:253727-253915:-1
so has part: feature:253727-253915:-1:exon

WP_041866512.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:253727-253915:-1:exon

SGP1_RS01285
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01285
so part of: sequence
location: complement(253926..254276)
location: region:253926-254276:-1
so has part: feature:253926-254276:-1:exon
subclass of: SO_0000010

position:253926:-1
position: 253926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254276:-1
position: 254276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:253926-254276:-1:exon

SGP1_RS01285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01285
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPIMIRVIPFLIVLFAAPLQAAGVLTQSLPAITLNLPVDEQEDALLKTVALPASTAGKLTATRLSLMAAGTPWDAGRGIYQTPVAGLGLSLCNRAGDRCLTQNTPWIPGDAPSAPV
SIO_010081: SGP1_RS01285
subclass of: SO_0000673
so part of: SGP1_RS01285
location: complement(253926..254276)
location: region:253926-254276:-1
so has part: feature:253926-254276:-1:exon

WP_148203328.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:253926-254276:-1:exon

SGP1_RS01290
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01290
so part of: sequence
location: complement(254267..254638)
location: region:254267-254638:-1
so has part: feature:254267-254638:-1:exon
subclass of: SO_0000010

position:254267:-1
position: 254267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254638:-1
position: 254638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254267-254638:-1:exon

SGP1_RS01290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01290
inference: COORDINATES: protein motif:HMM:NF025319.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FimD/PapC C-terminal domain-containing protein
translation: MSPYRYNETSLNTDKLKKQVEVEQYLSKRAAAEGAIIEVDFAAHKRAVHYAHIRTPEGAALPFGAVVYDAGDRNVGIVSAGGLTALNMQDSRWPFHVRSEGMTCQTDLQGAKPQSQIGELTCQ
SIO_010081: SGP1_RS01290
subclass of: SO_0000673
so part of: SGP1_RS01290
location: complement(254267..254638)
location: region:254267-254638:-1
so has part: feature:254267-254638:-1:exon

WP_041866514.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:254267-254638:-1:exon

SGP1_RS32355
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS32355
so part of: sequence
location: 254662..254874
location: region:254662-254874:1
so has part: feature:254662-254874:1:exon
subclass of: SO_0000010

position:254662:1
position: 254662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:254874:1
position: 254874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254662-254874:1:exon

SGP1_RS32355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS32355
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIGGYCGVVGDGQTEDVVGMHQSGTLRQWLAKGDAMVMGNDRSFEPQRESIAVPILAPGGTYRAFAGVIA
SIO_010081: SGP1_RS32355
subclass of: SO_0000673
so part of: SGP1_RS32355
location: 254662..254874
location: region:254662-254874:1
so has part: feature:254662-254874:1:exon

WP_041866515.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:254662-254874:1:exon

SGP1_RS01300
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01300
old locus tag: SG0147
pseudo: true
so part of: sequence
location: complement(254988..255894)
location: region:254988-255894:-1
so has part: feature:254988-255894:-1:exon
subclass of: SO_0000010

position:254988:-1
position: 254988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255894:-1
position: 255894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254988-255894:-1:exon

SGP1_RS01300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01300
old locus tag: SG0147
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000082157.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: SGP1_RS01300
subclass of: SO_0000673
so part of: SGP1_RS01300
location: complement(254988..255894)
location: region:254988-255894:-1
so has part: feature:254988-255894:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:254988-255894:-1:exon

SGP1_RS01305
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01305
so part of: sequence
location: complement(256185..257189)
location: region:256185-257189:-1
so has part: feature:256185-257189:-1:exon
subclass of: SO_0000010

position:256185:-1
position: 256185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257189:-1
position: 257189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256185-257189:-1:exon

SGP1_RS01305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01305
inference: COORDINATES: protein motif:HMM:NF012786.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015473 - fimbrial usher porin activity [Evidence IEA]
GO process: GO:0009297 - pilus assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fimbria/pilus outer membrane usher protein
translation: MRGFRVRNNGFLSVTDGNKTRYVSSKNYLEHHIDTLRSTLILGDFFTTGKVFAAQNLRGAALATNNAMLSNRELVYTPVITGVARSNATIVIKQNDFIIATRKVPPGPFALKDIPDSSSAGDMDITIIEANGDSRHFSQSYNAVDVLVPAHILHYSLYAGRNRSLMDAPPLAEADGLYGLSNTVTLISGVQYANDYHNLAAGMVANVPRLGGLYGVVNSSASETAAHGHQQGSLLTTGLSHSFTATGSYLYLTAEHRFAKGYQKYEDALSNQAYEHYRTRYALQLSQPVEEVSLTVNMAESFGFQGDKSHSLGGSLSFTLSRLTVITQPDPSIR
SIO_010081: SGP1_RS01305
subclass of: SO_0000673
so part of: SGP1_RS01305
location: complement(256185..257189)
location: region:256185-257189:-1
so has part: feature:256185-257189:-1:exon

WP_243466242.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:256185-257189:-1:exon

SGP1_RS32360
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS32360
pseudo: true
so part of: sequence
location: complement(<257322..257621)
location: region:257322-257621:-1
so has part: feature:257322-257621:-1:exon
subclass of: SO_0000010

position:257322:-1
position: 257322
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:257621:-1
position: 257621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257322-257621:-1:exon

SGP1_RS32360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS32360
inference: COORDINATES: protein motif:HMM:NF025320.2
GO function: GO:0005515 - protein binding [Evidence IEA]
note: internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: FimD/PapC N-terminal domain-containing protein
SIO_010081: SGP1_RS32360
subclass of: SO_0000673
so part of: SGP1_RS32360
location: complement(<257322..257621)
location: region:257322-257621:-1
so has part: feature:257322-257621:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:257322-257621:-1:exon

SGP1_RS01310
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01310
so part of: sequence
location: complement(257829..258098)
location: region:257829-258098:-1
so has part: feature:257829-258098:-1:exon
subclass of: SO_0000010

position:257829:-1
position: 257829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258098:-1
position: 258098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257829-258098:-1:exon

SGP1_RS01310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01310
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTVNSKDADEAHNVLRNSFGTAKGIGLQINRNNSPVALGKYMPLNLAGQPFNQGDNTLEFTANYVREDMSEDVKAGRLATDAVFEIAYK
SIO_010081: SGP1_RS01310
subclass of: SO_0000673
so part of: SGP1_RS01310
location: complement(257829..258098)
location: region:257829-258098:-1
so has part: feature:257829-258098:-1:exon

WP_041866517.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:257829-258098:-1:exon

SGP1_RS01315
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01315
so part of: sequence
location: complement(258507..258992)
location: region:258507-258992:-1
so has part: feature:258507-258992:-1:exon
subclass of: SO_0000010

position:258507:-1
position: 258507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258992:-1
position: 258992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258507-258992:-1:exon

SGP1_RS01315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01315
inference: COORDINATES: protein motif:HMM:NF012565.2
GO process: GO:0061077 - chaperone-mediated protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molecular chaperone
translation: MLLAAPLFSARAALILDGTRLIFPASEQSASIMVENPTDNDFLMQSWLENSSGQAQEKLLVEPPVAQIKAHHKVTLRVNIVDPQIRQGNSEKLFWLNVKEIPKVDANEESSDLLLAMQTRIKVFFRPQGVSAERGDGRRTTFFEYRYGRAFFQLGNHPKKS
SIO_010081: SGP1_RS01315
subclass of: SO_0000673
so part of: SGP1_RS01315
location: complement(258507..258992)
location: region:258507-258992:-1
so has part: feature:258507-258992:-1:exon

WP_041866518.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:258507-258992:-1:exon

SGP1_RS01320
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01320
pseudo: true
so part of: sequence
location: 259092..260217
location: region:259092-260217:1
so has part: feature:259092-260217:1:exon
subclass of: SO_0000010

position:259092:1
position: 259092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260217:1
position: 260217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259092-260217:1:exon

SGP1_RS01320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011785204.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS256 family transposase
SIO_010081: SGP1_RS01320
subclass of: SO_0000673
so part of: SGP1_RS01320
location: 259092..260217
location: region:259092-260217:1
so has part: feature:259092-260217:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:259092-260217:1:exon

SGP1_RS01325
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01325
pseudo: true
so part of: sequence
location: complement(260846..>261490)
location: region:260846-261490:-1
so has part: feature:260846-261490:-1:exon
subclass of: SO_0000010

position:260846:-1
position: 260846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261490:-1
position: 261490
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260846-261490:-1:exon

SGP1_RS01325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01325
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5 family transposase
SIO_010081: SGP1_RS01325
subclass of: SO_0000673
so part of: SGP1_RS01325
location: complement(260846..>261490)
location: region:260846-261490:-1
so has part: feature:260846-261490:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:260846-261490:-1:exon

SGP1_RS30500
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS30500
so part of: sequence
location: complement(262970..263158)
location: region:262970-263158:-1
so has part: feature:262970-263158:-1:exon
subclass of: SO_0000010

position:262970:-1
position: 262970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263158:-1
position: 263158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:262970-263158:-1:exon

SGP1_RS30500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS30500
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKGKHLIPIILLISSCSFHQMSTSEQKLFDKVQSAILTQDMNKLSELEYEKIATYISEGKVH
SIO_010081: SGP1_RS30500
subclass of: SO_0000673
so part of: SGP1_RS30500
location: complement(262970..263158)
location: region:262970-263158:-1
so has part: feature:262970-263158:-1:exon

WP_041866520.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:262970-263158:-1:exon

SGP1_RS01335
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01335
old locus tag: SG0148
so part of: sequence
location: complement(263569..264048)
location: region:263569-264048:-1
so has part: feature:263569-264048:-1:exon
subclass of: SO_0000010

position:263569:-1
position: 263569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264048:-1
position: 264048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:263569-264048:-1:exon

SGP1_RS01335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01335
old locus tag: SG0148
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013201602.1
GO process: GO:0033103 - protein secretion by the type VI secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Hcp family type VI secretion system effector
translation: MAIPAYLWLKDDGGADIKGLVDVRDREGSIEILSFMHGLSIPTDSHTGKLTGTRIHSEMEFEKEFDSSSPYLYKAVSSGQTLKSAEIKWYRINHAGQEEEYFNILLEGVIVVSVNPLMHNIKSIENMNHLESITLRYAIITWKYCDGNIQHSDSWKERA
SIO_010081: SGP1_RS01335
subclass of: SO_0000673
so part of: SGP1_RS01335
location: complement(263569..264048)
location: region:263569-264048:-1
so has part: feature:263569-264048:-1:exon

WP_011410012.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:263569-264048:-1:exon

SGP1_RS01340
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01340
pseudo: true
so part of: sequence
location: 264440..265337
location: region:264440-265337:1
so has part: feature:264440-265337:1:exon
subclass of: SO_0000010

position:264440:1
position: 264440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265337:1
position: 265337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264440-265337:1:exon

SGP1_RS01340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_032491235.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5 family transposase
SIO_010081: SGP1_RS01340
subclass of: SO_0000673
so part of: SGP1_RS01340
location: 264440..265337
location: region:264440-265337:1
so has part: feature:264440-265337:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:264440-265337:1:exon

SGP1_RS34855
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS34855
so part of: sequence
location: 265475..265609
location: region:265475-265609:1
so has part: feature:265475-265609:1:exon
subclass of: SO_0000010

position:265475:1
position: 265475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265609:1
position: 265609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:265475-265609:1:exon

SGP1_RS34855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS34855
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRIILDKAIKDKRNLTADEAKQFDELCAKVNSLKATLPSGSADR
SIO_010081: SGP1_RS34855
subclass of: SO_0000673
so part of: SGP1_RS34855
location: 265475..265609
location: region:265475-265609:1
so has part: feature:265475-265609:1:exon

WP_279379427.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:265475-265609:1:exon

SGP1_RS01350
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01350
old locus tag: SG0149
so part of: sequence
location: 265929..266480
location: region:265929-266480:1
so has part: feature:265929-266480:1:exon
subclass of: SO_0000010

position:265929:1
position: 265929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266480:1
position: 266480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:265929-266480:1:exon

SGP1_RS01350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01350
old locus tag: SG0149
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012814654.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVKSVLLPLFLTLIGSGVAHAALKAPYTGPDCSAKRDGRIVGGITDSLQLDHPVNEKHMQYFDKLIGRGITKKITRFSSEKISKAEAKRLMLRRAKMNGIKESEIKDTALENQYLIDVDFYRQYYLIKSSQGFEAIAEYYSLFLHGKWPVGLKEGESCANDLEHIYIISETIDGHTIDFGSPY
SIO_010081: SGP1_RS01350
subclass of: SO_0000673
so part of: SGP1_RS01350
location: 265929..266480
location: region:265929-266480:1
so has part: feature:265929-266480:1:exon

WP_011410013.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:265929-266480:1:exon

SGP1_RS28920
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS28920
so part of: sequence
location: complement(266874..267086)
location: region:266874-267086:-1
so has part: feature:266874-267086:-1:exon
subclass of: SO_0000010

position:266874:-1
position: 266874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267086:-1
position: 267086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266874-267086:-1:exon

SGP1_RS28920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS28920
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIEITPDMPMATAGPRLYKIVVNKQNRQRPNFHALPLHMNIWFPVYEITTKLRSHTFWHNPAVKRLIFFP
SIO_010081: SGP1_RS28920
subclass of: SO_0000673
so part of: SGP1_RS28920
location: complement(266874..267086)
location: region:266874-267086:-1
so has part: feature:266874-267086:-1:exon

WP_148203330.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:266874-267086:-1:exon

SGP1_RS32365
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS32365
pseudo: true
so part of: sequence
location: <267190..267381
location: region:267190-267381:1
so has part: feature:267190-267381:1:exon
subclass of: SO_0000010

position:267190:1
position: 267190
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:267381:1
position: 267381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:267190-267381:1:exon

SGP1_RS32365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS32365
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004094770.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: phage portal protein
SIO_010081: SGP1_RS32365
subclass of: SO_0000673
so part of: SGP1_RS32365
location: <267190..267381
location: region:267190-267381:1
so has part: feature:267190-267381:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:267190-267381:1:exon

SGP1_RS01360
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: fis
locus tag: SGP1_RS01360
old locus tag: SG0150
so part of: sequence
location: complement(267652..267948)
location: region:267652-267948:-1
so has part: feature:267652-267948:-1:exon
subclass of: SO_0000010

position:267652:-1
position: 267652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267948:-1
position: 267948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:267652-267948:-1:exon

SGP1_RS01360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: fis
locus tag: SGP1_RS01360
old locus tag: SG0150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-binding transcriptional regulator Fis
translation: MFEQRVNSDVLTVSTVNSQDQVTQKPLRDSVKQALKNYFAQLNGQDVNDLYELVLAEVEQPLLDMVMQYTRGNQTRAAQMMGINRGTLRKKLKKYGMN
SIO_010081: SGP1_RS01360
subclass of: SO_0000673
so part of: SGP1_RS01360
location: complement(267652..267948)
location: region:267652-267948:-1
so has part: feature:267652-267948:-1:exon

WP_011410014.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:267652-267948:-1:exon

SGP1_RS01365
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: dusB
locus tag: SGP1_RS01365
pseudo: true
so part of: sequence
location: complement(267972..268892)
location: region:267972-268892:-1
so has part: feature:267972-268892:-1:exon
subclass of: SO_0000010

position:267972:-1
position: 267972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268892:-1
position: 268892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:267972-268892:-1:exon

SGP1_RS01365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: dusB
locus tag: SGP1_RS01365
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008785970.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
GO process: GO:0008033 - tRNA processing [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: tRNA dihydrouridine synthase DusB
SIO_010081: SGP1_RS01365
subclass of: SO_0000673
so part of: SGP1_RS01365
location: complement(267972..268892)
location: region:267972-268892:-1
so has part: feature:267972-268892:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:267972-268892:-1:exon

SGP1_RS01370
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: prmA
locus tag: SGP1_RS01370
old locus tag: SG0151
so part of: sequence
location: complement(269215..270096)
location: region:269215-270096:-1
so has part: feature:269215-270096:-1:exon
subclass of: SO_0000010

position:269215:-1
position: 269215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270096:-1
position: 270096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269215-270096:-1:exon

SGP1_RS01370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: prmA
locus tag: SGP1_RS01370
old locus tag: SG0151
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012147116.1
GO function: GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO process: GO:0036211 - protein modification process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L11 methyltransferase
translation: MPWIQLKITTTGQQADTLSDALTESGAVSVTFQDTHDVPVYEPLPGETRLWGDTDVIGLYDAATDIATVLDVLKTHPLLGADFTYKIEQLEDKDWEREWMDNFHPMRFGERLWICPSWRPVPDPQAVNVMLDPGLAFGTGTHPTTALCLQWLDGLDLRGKTVIDFGCGSGILAIAALKLGAAHAVGIDIDPQAILASRDNAQRNGVAELLTLYLPQQQPQDLHANVVVANILAGPLRELAPLIIDLPLPGGYLGLSGILASQAESVAQAYAAAFSLDPVAEKEEWCRITGTRR
SIO_010081: SGP1_RS01370
subclass of: SO_0000673
so part of: SGP1_RS01370
location: complement(269215..270096)
location: region:269215-270096:-1
so has part: feature:269215-270096:-1:exon

WP_011410015.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:269215-270096:-1:exon

SGP1_RS01375
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01375
pseudo: true
so part of: sequence
location: complement(270117..271082)
location: region:270117-271082:-1
so has part: feature:270117-271082:-1:exon
subclass of: SO_0000010

position:270117:-1
position: 270117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271082:-1
position: 271082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270117-271082:-1:exon

SGP1_RS01375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01375
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004958042.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: SGP1_RS01375
subclass of: SO_0000673
so part of: SGP1_RS01375
location: complement(270117..271082)
location: region:270117-271082:-1
so has part: feature:270117-271082:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:270117-271082:-1:exon

SGP1_RS01380
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01380
so part of: sequence
location: complement(271129..271314)
location: region:271129-271314:-1
so has part: feature:271129-271314:-1:exon
subclass of: SO_0000010

position:271129:-1
position: 271129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271314:-1
position: 271314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271129-271314:-1:exon

SGP1_RS01380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01380
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004936865.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YhdT family protein
translation: MDKRFLQAHREARWAFGLTLAYLAAWILAAYLPDNGPGITGLPHWFEMACLWVPLLFIGLC
SIO_010081: SGP1_RS01380
subclass of: SO_0000673
so part of: SGP1_RS01380
location: complement(271129..271314)
location: region:271129-271314:-1
so has part: feature:271129-271314:-1:exon

WP_050747917.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:271129-271314:-1:exon

SGP1_RS01385
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: accC
locus tag: SGP1_RS01385
old locus tag: SG0152
so part of: sequence
location: complement(271474..272823)
location: region:271474-272823:-1
so has part: feature:271474-272823:-1:exon
subclass of: SO_0000010

position:271474:-1
position: 271474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272823:-1
position: 272823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271474-272823:-1:exon

SGP1_RS01385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: accC
locus tag: SGP1_RS01385
old locus tag: SG0152
EC number: 6.3.4.14
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011817284.1
GO component: GO:0009317 - acetyl-CoA carboxylase complex [Evidence IEA]
GO function: GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]; GO:0004075 - biotin carboxylase activity [Evidence IEA]
GO process: GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetyl-CoA carboxylase biotin carboxylase subunit
translation: MLDKIVIANRGEIALRILRACKELGIKTVAVHSTADRDLKHVLLADETICIGPPPSVKSYLNIPAIISAAEITGSVAIHPGYGFLSENADFAEQVERSGFIFIGPHAETIRLMGDKVSAINAMKKADVPCVPGSDGPVGEDMDKNRAIANRIGYPVIIKASGGGGGRGMRVVRSNKELEASIRMTRAEAKAAFNNDMVYMEKYLENPRHIEIQVLADGQGNALYLAERDCSMQRRHQKVVEEAPAPTITEELRHFIGERCAKACVEIGYRGAGTFEFLYENGEFFFIEMNTRIQVEHPVTEMITGVDLIKEQLRIAAGQPLSLKQDEVKVSGHAVECRINAEDPTSFLPSPGKITRFHAPGGLGVRWESHIYAGYSVPPYYDSMIGKLICFGETRDVAIARMKNALAELIIDGIKTNIDLQLKIMNDEHFQQGGTNIHYLEKKLGLQET
SIO_010081: SGP1_RS01385
subclass of: SO_0000673
so part of: SGP1_RS01385
location: complement(271474..272823)
location: region:271474-272823:-1
so has part: feature:271474-272823:-1:exon

WP_011410016.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:271474-272823:-1:exon

SGP1_RS28930
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: accB
locus tag: SGP1_RS28930
old locus tag: SG0153
so part of: sequence
location: complement(272835..273269)
location: region:272835-273269:-1
so has part: feature:272835-273269:-1:exon
subclass of: SO_0000010

position:272835:-1
position: 272835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273269:-1
position: 273269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272835-273269:-1:exon

SGP1_RS28930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: accB
locus tag: SGP1_RS28930
old locus tag: SG0153
EC number: 6.4.1.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004392389.1
GO component: GO:0009317 - acetyl-CoA carboxylase complex [Evidence IEA]
GO function: GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]
GO process: GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetyl-CoA carboxylase biotin carboxyl carrier protein
translation: MDIRKIKKLIELVEESGISELEISEGEESVRISRATAQPAYPMMQQAYIPAVQQQSAAPAAVPATMSGHMVRSPMVGTFYSTPSPDAKPFVEVGQKVNVGDTLCIVEAMKMMNQIESDKAGVVKAILLDNGQPVEFDEPLVVIE
SIO_010081: SGP1_RS28930
subclass of: SO_0000673
so part of: SGP1_RS28930
location: complement(272835..273269)
location: region:272835-273269:-1
so has part: feature:272835-273269:-1:exon

WP_011410017.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:272835-273269:-1:exon

SGP1_RS28935
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: aroQ
locus tag: SGP1_RS28935
old locus tag: SG0154
so part of: sequence
location: complement(273291..273743)
location: region:273291-273743:-1
so has part: feature:273291-273743:-1:exon
subclass of: SO_0000010

position:273291:-1
position: 273291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273743:-1
position: 273743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273291-273743:-1:exon

SGP1_RS28935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: aroQ
locus tag: SGP1_RS28935
old locus tag: SG0154
EC number: 4.2.1.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002210071.1
GO function: GO:0003855 - 3-dehydroquinate dehydratase activity [Evidence IEA]
GO process: GO:0009423 - chorismate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II 3-dehydroquinate dehydratase
translation: MADKFHILLLNGPNLNLLGTREPDKYGHTTLADITADLSALAGSLGAEFSHFQSNAEHALIDRIHQARGNTDFIVINPAAFTHTSVALRDALLAVNIPFIEIHLSNVHAREPFRHHSYLSDIAIGVICGLGADGYHFALQTAVKRLSTSN
SIO_010081: SGP1_RS28935
subclass of: SO_0000673
so part of: SGP1_RS28935
location: complement(273291..273743)
location: region:273291-273743:-1
so has part: feature:273291-273743:-1:exon

WP_011410018.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:273291-273743:-1:exon

SGP1_RS01400
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01400
pseudo: true
so part of: sequence
location: complement(<273954..274359)
location: region:273954-274359:-1
so has part: feature:273954-274359:-1:exon
subclass of: SO_0000010

position:273954:-1
position: 273954
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:274359:-1
position: 274359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273954-274359:-1:exon

SGP1_RS01400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010681554.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: SGP1_RS01400
subclass of: SO_0000673
so part of: SGP1_RS01400
location: complement(<273954..274359)
location: region:273954-274359:-1
so has part: feature:273954-274359:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:273954-274359:-1:exon

SGP1_RS01405
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: csrD
locus tag: SGP1_RS01405
old locus tag: SG0155
so part of: sequence
location: 274547..276493
location: region:274547-276493:1
so has part: feature:274547-276493:1:exon
subclass of: SO_0000010

position:274547:1
position: 274547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276493:1
position: 276493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274547-276493:1:exon

SGP1_RS01405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: csrD
locus tag: SGP1_RS01405
old locus tag: SG0155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015855332.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNase E specificity factor CsrD
translation: MRLNVRLSAMTAMFCALVTLLMLAGSALSYFRLHQQRLDRQLTAMADSFDRLMLTEPLSSMTPWLPLAMDSAGITQLTLQRQGETVYRLALPPGNGRGDPLSDTQRQRELPLPRHPDYRLVISYTDTLASDVHSLRATAPVSVALGLIIVFLFLALRWLRRQIQPQESLETRARRIIYGERDNVGEQPDEMPTLTGSAIDRLLRDLAQAREQRSRVDILIRAFAAQDARTGLTNRLSFESQLALQLEDNQDVGAHGVVLLIMRPDPERLVERLGPTHAAAIDGALINLVSVSLKRYPDALLAHYFRDDLAVLLPHRSLKEAESLTQQLLGALAILPDIPATCRDDLLHIGVSAYRPGQTAVEVMESAEHAAREAGLQGGNGWSVYDNRVPQQARGNVKWRTLLENTLAGGGPQLLIRPAFGRDGALDHYVVINRIHDGGDTLTAAEFLPVMRQLGLVQRYERQQLLRLIALLSQLPGVVLSIAVSVDSLLQRDFRRWLRDTLMQCGKLMRSQIMFELVEADLCQHLEPLRPALRLLAGLGCLLTVNRAGMTLVSTGYISLVPISVIKLHPGLVRDIDQRQENQLFVQSLPEACLGTRTRVFATGVRSVREWQTLLDNAVAGGEGDFFAPIAPLGELLKKYSRFDPRLV
SIO_010081: SGP1_RS01405
subclass of: SO_0000673
so part of: SGP1_RS01405
location: 274547..276493
location: region:274547-276493:1
so has part: feature:274547-276493:1:exon

WP_011410019.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:274547-276493:1:exon

SGP1_RS01410
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: mreB
locus tag: SGP1_RS01410
old locus tag: SG0156
so part of: sequence
location: 276807..277850
location: region:276807-277850:1
so has part: feature:276807-277850:1:exon
subclass of: SO_0000010

position:276807:1
position: 276807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277850:1
position: 277850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276807-277850:1:exon

SGP1_RS01410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: mreB
locus tag: SGP1_RS01410
old locus tag: SG0156
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rod shape-determining protein MreB
translation: MFKKFRGMFSNDLSIDLGTANTLIYVKGQGIVLNEPSVVAIRQDRAGSPKSVAAVGHEAKQMLGRTPGNIAAIRPMKDGVIADFFVTEKMLQHFIKQVHSNSFMRPSPRVLVCVPVGATQVERRAIRESAQGAGAREVFLIEEPMAAAIGAGLPVSEATGSMVVDIGGGTTEVAVISLNGVVYSSSVRIGGDRFDEAIINYVRRNYGSLIGEATAERIKHGIGSAYPDDEVREIEVRGRNLAEGVPRGFTLNSNEILEALQEPLTGIVSAVMVALEQCPPELASDISERGMVLTGGGALLRNLDRLLMEETGIPVVVAEDPLTCVARGGGKALEMIDMHGGDLFSEE
SIO_010081: SGP1_RS01410
subclass of: SO_0000673
so part of: SGP1_RS01410
location: 276807..277850
location: region:276807-277850:1
so has part: feature:276807-277850:1:exon

WP_011410020.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:276807-277850:1:exon

SGP1_RS01415
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: mreC
locus tag: SGP1_RS01415
old locus tag: SG0157
so part of: sequence
location: 277945..278916
location: region:277945-278916:1
so has part: feature:277945-278916:1:exon
subclass of: SO_0000010

position:277945:1
position: 277945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278916:1
position: 278916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277945-278916:1:exon

SGP1_RS01415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: mreC
locus tag: SGP1_RS01415
old locus tag: SG0157
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012147105.1
GO process: GO:0008360 - regulation of cell shape [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rod shape-determining protein MreC
translation: MKPIFSRGPSLQLRLFLAVMVAIAAIIADSRLGTFVKIRTYMDTAVSPFYFLANGPRQMLDNVSQTLATRAQLALENRALRQELLLKNSELLLLGQYKQENARLRELLGSPLRQDEQKMVTQVISTSTDPYSDQVVIDKGLDNSVYVGQPVISDKGVVGQVIATSKLTSRVLLICDSSHALPIQVLRNDIRVIVAGNGCTEDLQLEHLPGNTDIRVGDVLVTSGLDGRFPEGYPVAVVSSVKVDTQRAYTVIQARPTAGLQRLRYLLLLWGADPRGEVPLPPDEVHRVANERLMQMMPQVLPPPDAMGPPPRRPLFSGAGERQ
SIO_010081: SGP1_RS01415
subclass of: SO_0000673
so part of: SGP1_RS01415
location: 277945..278916
location: region:277945-278916:1
so has part: feature:277945-278916:1:exon

WP_011410021.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:277945-278916:1:exon

SGP1_RS01420
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: mreD
locus tag: SGP1_RS01420
old locus tag: SG0158
so part of: sequence
location: 278913..279401
location: region:278913-279401:1
so has part: feature:278913-279401:1:exon
subclass of: SO_0000010

position:278913:1
position: 278913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279401:1
position: 279401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278913-279401:1:exon

SGP1_RS01420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: mreD
locus tag: SGP1_RS01420
old locus tag: SG0158
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002210077.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rod shape-determining protein MreD
translation: MNRYHRHGGWIIWLSFLIAIVLQIMPWPPQLYLFRPSWLNLLLIYWVMALPHRVNVGTGFILGLIMDLILGSTLGVRALALSILAYLVVFKFQLFRNMAFWQQALIVILLSLTTQVIVFWAEFLVINISFRPEIFWSSVVDGVLWPWLFLLMRKIRRQFAVQ
SIO_010081: SGP1_RS01420
subclass of: SO_0000673
so part of: SGP1_RS01420
location: 278913..279401
location: region:278913-279401:1
so has part: feature:278913-279401:1:exon

WP_011410022.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:278913-279401:1:exon

SGP1_RS01425
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01425
pseudo: true
so part of: sequence
location: 279420..279863
location: region:279420-279863:1
so has part: feature:279420-279863:1:exon
subclass of: SO_0000010

position:279420:1
position: 279420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279863:1
position: 279863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279420-279863:1:exon

SGP1_RS01425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01425
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002210078.1
GO function: GO:0047429 - nucleoside triphosphate diphosphatase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Maf family protein
SIO_010081: SGP1_RS01425
subclass of: SO_0000673
so part of: SGP1_RS01425
location: 279420..279863
location: region:279420-279863:1
so has part: feature:279420-279863:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:279420-279863:1:exon

SGP1_RS01430
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: rng
locus tag: SGP1_RS01430
old locus tag: SG0159
so part of: sequence
location: 279877..281346
location: region:279877-281346:1
so has part: feature:279877-281346:1:exon
subclass of: SO_0000010

position:279877:1
position: 279877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281346:1
position: 281346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279877-281346:1:exon

SGP1_RS01430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: rng
locus tag: SGP1_RS01430
old locus tag: SG0159
EC number: 3.1.26.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006818051.1
GO function: GO:0004540 - ribonuclease activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0006396 - RNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease G
translation: MTAELLVNITPSETRVAYIDGGILQEIHIEREARRGIVGNIYKGRVSRVLPGMQAAFVDIGLDKAAFLHASDIMPHTECVAGEEQKNFQVRDIAELVRQGQDIMVKVVKDPLGTKGARLTTDITLPSRYLVFMPGAAHVGVSQRIDSEAERERLKQIVAQYCDEQGGFIIRTAAEGIGSEELSQDAAFLKRLWTKVMERKRRNQTRYRLYGELALAQRILRDFAGAALDRIRVDSRLTHELLLEFTAEYIPEMTAKLEYYSGKQPIFDLYDVENEIQRLLERKVELKSGGYLIIDQTEAMTTIDINTGAFVGHRNLDETIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMSNEEHRRRVLHSLEQALSKDRVKTGINGFSQLGLVEMTRKRTRESIERVLCSECPTCHGRGTVKTIESVCYEIMREIVRVHHAYDSDRFLVYASAAVGEALKSDESHALAEVEIFVGKQVKVQIEPLYSQEQFDVVMM
SIO_010081: SGP1_RS01430
subclass of: SO_0000673
so part of: SGP1_RS01430
location: 279877..281346
location: region:279877-281346:1
so has part: feature:279877-281346:1:exon

WP_011410023.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:279877-281346:1:exon

SGP1_RS01435
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: yhdP
locus tag: SGP1_RS01435
old locus tag: SG0160
so part of: sequence
location: 281432..285247
location: region:281432-285247:1
so has part: feature:281432-285247:1:exon
subclass of: SO_0000010

position:281432:1
position: 281432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285247:1
position: 285247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281432-285247:1:exon

SGP1_RS01435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: yhdP
locus tag: SGP1_RS01435
old locus tag: SG0160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015698922.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AsmA2 domain-containing protein YhdP
translation: MKRLPGILMAIGVTLIVLVALTVSALRLALPHLDRFRPQIVSVLNRAFDADIQLRQLKSSWQSFGPTLDIGGIDAATADERLHVQRVTLALDVWQSLLHWRWQFRDVTFYRLQLDLNTTLMGRDHRGSPISSDRFSNLFLRQFDHFILRGSQITFLTPSGERTRLSVPQLTWLNTLNRHRVEGKISLSSTEVQQGAIDVRMDLHDQQGLLDNGKVYLQARDVDLKPWFSQLLQSNTGLQSADFSLAAWLTLEKGEIAGADVLLSRGAALWQDGDQTHRLDVDRMALHLSKRQNAWQMEVPTLNIATDGQSWAPAALSLLWLPAKRHLFFPDREGEIRLRASRLDLELFSPLLPLISAVTPTLRARWHDLQPRGELSALALDIPLNDPGSTRFQARWRSLSWQTWELLPGAEHVSGSAEGSLATGRLQLALDNSTLPYPSMFRAPLALSRARATFDWRHNPQEGLVLWGRNIDAQARSLWANGDFYFHKPVKGEPWLDILAGLRLDNAADAWRYFPEPLMGTRLVDYMTGALKGGQVDNATLVFAGSPSRFPFKHNDGQFEVWVPLKQAEYEFEPGWPPLTQLDIDLDFVNDGLFMHAPQTALGEAKGSNIAASIPDYSKEKLLIDVGLSGTGDAIRDYFLQTPLKASLGKTLNELQVGGEVHGNLHLDIPLDGQLVTAAGNVALQNNSLFIKPLGTTLQRLNGNFHYSNGDLDSAPLDAQWFGQPVSVNFTTREKPTGFDVNVGLNGDWALNQLPGLPDALKTSVNGRAAWQSDIAVALPLKGDTRYQVAVKSDLKNVSSHLPPPLDKPGGRPFMLAVNATGDLRSFLLSGHAGGGNSFNSQWLLGRQVTLARGAWADGGKIPPLPADRRLTLSLPALDGEKWLALLKSPTPPGDPLSAARFRYPDSLTLHTPVLTLGGQVWHQLALTRSNVAGGSKVAVKGKEIKGTLTMAANAPWRADLAYLYYNPTFATAGGDDGASPTKQLLSDSDTFAGWPALSFTCRQCWIKGQNLGQISATIQPQQDTLMLTGGVIDTGNARLTAEGSWLHNRRENRTSLKGTLAGKDIGAAADYIGMDLPLREAPFHLNYDLHWREAPWQPDIASLNGVLHSQLGKGKIDNISSGSAGRLLRLISFDALLRKLQFDFSDTFGKGFYFDSIKGTAWLKEGTLHTNDLLIDGLEADIAMTGDVDLNRQRIDMEAVIAPEISATVGVATAFVINPVVGAAVFAASKVLAPLWSKLSLIRYHISGSLEEPRIQEVLRQPRASEAKSK
SIO_010081: SGP1_RS01435
subclass of: SO_0000673
so part of: SGP1_RS01435
location: 281432..285247
location: region:281432-285247:1
so has part: feature:281432-285247:1:exon

WP_011410024.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:281432-285247:1:exon

SGP1_RS01440
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01440
old locus tag: SG0161
pseudo: true
so part of: sequence
location: 285356..286693
location: region:285356-286693:1
so has part: feature:285356-286693:1:exon
subclass of: SO_0000010

position:285356:1
position: 285356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286693:1
position: 286693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285356-286693:1:exon

SGP1_RS01440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01440
old locus tag: SG0161
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007888214.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: metallopeptidase TldD-related protein
SIO_010081: SGP1_RS01440
subclass of: SO_0000673
so part of: SGP1_RS01440
location: 285356..286693
location: region:285356-286693:1
so has part: feature:285356-286693:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:285356-286693:1:exon

SGP1_RS01445
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: aaeR
locus tag: SGP1_RS01445
old locus tag: SG0162
pseudo: true
so part of: sequence
location: complement(286774..287699)
location: region:286774-287699:-1
so has part: feature:286774-287699:-1:exon
subclass of: SO_0000010

position:286774:-1
position: 286774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287699:-1
position: 287699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286774-287699:-1:exon

SGP1_RS01445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: aaeR
locus tag: SGP1_RS01445
old locus tag: SG0162
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012772984.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: HTH-type transcriptional activator AaeR
SIO_010081: SGP1_RS01445
subclass of: SO_0000673
so part of: SGP1_RS01445
location: complement(286774..287699)
location: region:286774-287699:-1
so has part: feature:286774-287699:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:286774-287699:-1:exon

SGP1_RS32370
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: aaeX
locus tag: SGP1_RS32370
pseudo: true
so part of: sequence
location: 288032..>288220
location: region:288032-288220:1
so has part: feature:288032-288220:1:exon
subclass of: SO_0000010

position:288032:1
position: 288032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288220:1
position: 288220
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288032-288220:1:exon

SGP1_RS32370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: aaeX
locus tag: SGP1_RS32370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000051842.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: p-hydroxybenzoic acid efflux pump operon protein AaeX
SIO_010081: SGP1_RS32370
subclass of: SO_0000673
so part of: SGP1_RS32370
location: 288032..>288220
location: region:288032-288220:1
so has part: feature:288032-288220:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:288032-288220:1:exon

SGP1_RS32375
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: aaeA
locus tag: SGP1_RS32375
pseudo: true
so part of: sequence
location: 288228..289104
location: region:288228-289104:1
so has part: feature:288228-289104:1:exon
subclass of: SO_0000010

position:288228:1
position: 288228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289104:1
position: 289104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288228-289104:1:exon

SGP1_RS32375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: aaeA
locus tag: SGP1_RS32375
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004097178.1
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: p-hydroxybenzoic acid efflux pump subunit AaeA
SIO_010081: SGP1_RS32375
subclass of: SO_0000673
so part of: SGP1_RS32375
location: 288228..289104
location: region:288228-289104:1
so has part: feature:288228-289104:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:288228-289104:1:exon

SGP1_RS01460
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01460
pseudo: true
so part of: sequence
location: 289119..290920
location: region:289119-290920:1
so has part: feature:289119-290920:1:exon
subclass of: SO_0000010

position:289119:1
position: 289119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:290920:1
position: 290920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289119-290920:1:exon

SGP1_RS01460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013650496.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: FUSC family protein
SIO_010081: SGP1_RS01460
subclass of: SO_0000673
so part of: SGP1_RS01460
location: 289119..290920
location: region:289119-290920:1
so has part: feature:289119-290920:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:289119-290920:1:exon

SGP1_RS01465
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01465
old locus tag: SG0164
pseudo: true
so part of: sequence
location: 291182..292596
location: region:291182-292596:1
so has part: feature:291182-292596:1:exon
subclass of: SO_0000010

position:291182:1
position: 291182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292596:1
position: 292596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291182-292596:1:exon

SGP1_RS01465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01465
old locus tag: SG0164
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006818065.1
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: NAD-dependent succinate-semialdehyde dehydrogenase
SIO_010081: SGP1_RS01465
subclass of: SO_0000673
so part of: SGP1_RS01465
location: 291182..292596
location: region:291182-292596:1
so has part: feature:291182-292596:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:291182-292596:1:exon

SGP1_RS01470
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01470
so part of: sequence
location: 292685..292873
location: region:292685-292873:1
so has part: feature:292685-292873:1:exon
subclass of: SO_0000010

position:292685:1
position: 292685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292873:1
position: 292873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292685-292873:1:exon

SGP1_RS01470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01470
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEKVSFDFNHIADLPAFYRQFAISEPYDANLDGLWRTVMSHLPLPVAIEFLHLNVLTDGSCA
SIO_010081: SGP1_RS01470
subclass of: SO_0000673
so part of: SGP1_RS01470
location: 292685..292873
location: region:292685-292873:1
so has part: feature:292685-292873:1:exon

WP_041866524.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:292685-292873:1:exon

SGP1_RS01475
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: yjgA
locus tag: SGP1_RS01475
old locus tag: SG0165
so part of: sequence
location: complement(292891..293439)
location: region:292891-293439:-1
so has part: feature:292891-293439:-1:exon
subclass of: SO_0000010

position:292891:-1
position: 292891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293439:-1
position: 293439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292891-293439:-1:exon

SGP1_RS01475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: yjgA
locus tag: SGP1_RS01475
old locus tag: SG0165
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013814696.1
GO process: GO:0042254 - ribosome biogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome biogenesis factor YjgA
translation: MNKQPEEWQDPQSLQQQDDEQDEIIWVSKSEIKRDAETLKQLGVELVSLGKNALEKIPLDDDLRCAIALAQRIKREGQRRQIQLIGKMLRARDPEPIQQALDKLKNRHNQQITLFHKLEILRDKLLAQGDDAIAQVLEHYPQADRQQLRALVRNAQKEKAAKKPPKTARQLYQYLHTLSEAD
SIO_010081: SGP1_RS01475
subclass of: SO_0000673
so part of: SGP1_RS01475
location: complement(292891..293439)
location: region:292891-293439:-1
so has part: feature:292891-293439:-1:exon

WP_011410029.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:292891-293439:-1:exon

SGP1_RS01480
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: pmbA
locus tag: SGP1_RS01480
pseudo: true
so part of: sequence
location: 293881..295177
location: region:293881-295177:1
so has part: feature:293881-295177:1:exon
subclass of: SO_0000010

position:293881:1
position: 293881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295177:1
position: 295177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293881-295177:1:exon

SGP1_RS01480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: pmbA
locus tag: SGP1_RS01480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001300025.1
GO function: GO:0008237 - metallopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: metalloprotease PmbA
SIO_010081: SGP1_RS01480
subclass of: SO_0000673
so part of: SGP1_RS01480
location: 293881..295177
location: region:293881-295177:1
so has part: feature:293881-295177:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:293881-295177:1:exon

SGP1_RS01485
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: cybC
locus tag: SGP1_RS01485
old locus tag: SG0166
so part of: sequence
location: 295347..295754
location: region:295347-295754:1
so has part: feature:295347-295754:1:exon
subclass of: SO_0000010

position:295347:1
position: 295347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295754:1
position: 295754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295347-295754:1:exon

SGP1_RS01485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: cybC
locus tag: SGP1_RS01485
old locus tag: SG0166
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015379185.1
GO component: GO:0042597 - periplasmic space [Evidence IEA]
GO function: GO:0009055 - electron transfer activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]
GO process: GO:0022900 - electron transport chain [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome b562
translation: MILVATGMRRLFLAVLPLLAVSFVTAATARELSEDMDMIAANYSAVLHTDNPATLKQALADMYAAAADARDATPPKLRGQAPESPQMQDYRRGIDTLLGQIEQAQAKVEKGDIEGAKQVAGQFKQTRDENHAKFR
SIO_010081: SGP1_RS01485
subclass of: SO_0000673
so part of: SGP1_RS01485
location: 295347..295754
location: region:295347-295754:1
so has part: feature:295347-295754:1:exon

WP_243466142.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:295347-295754:1:exon

SGP1_RS01490
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01490
so part of: sequence
location: complement(295770..296027)
location: region:295770-296027:-1
so has part: feature:295770-296027:-1:exon
subclass of: SO_0000010

position:295770:-1
position: 295770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296027:-1
position: 296027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295770-296027:-1:exon

SGP1_RS01490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01490
inference: COORDINATES: protein motif:HMM:NF020135.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ketopantoate reductase C-terminal domain-containing protein
translation: MSIAEAGGYRRRDDVIAETTDLLSQQGSPMTSSLYRDLIAGNAVEADQIIGDLKARANHAGLPVPLLSAVWTQWTHLSVYQQNRE
SIO_010081: SGP1_RS01490
subclass of: SO_0000673
so part of: SGP1_RS01490
location: complement(295770..296027)
location: region:295770-296027:-1
so has part: feature:295770-296027:-1:exon

WP_158302302.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:295770-296027:-1:exon

SGP1_RS30505
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS30505
so part of: sequence
location: complement(295990..296244)
location: region:295990-296244:-1
so has part: feature:295990-296244:-1:exon
subclass of: SO_0000010

position:295990:-1
position: 295990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296244:-1
position: 296244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295990-296244:-1:exon

SGP1_RS30505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS30505
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIGVRNGWRASTRPLGNAGFDACAIPSITTALWEKWILLSSLGGITCLMRGTIGQVAAAPGGPAFARAGGGGGVDRRGRRLPAA
SIO_010081: SGP1_RS30505
subclass of: SO_0000673
so part of: SGP1_RS30505
location: complement(295990..296244)
location: region:295990-296244:-1
so has part: feature:295990-296244:-1:exon

WP_158302303.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:295990-296244:-1:exon

SGP1_RS01495
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01495
so part of: sequence
location: complement(296183..296398)
location: region:296183-296398:-1
so has part: feature:296183-296398:-1:exon
subclass of: SO_0000010

position:296183:-1
position: 296183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296398:-1
position: 296398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296183-296398:-1:exon

SGP1_RS01495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01495
inference: COORDINATES: protein motif:HMM:NF014601.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLSPSGNVTLQPALVEAGSLTSHYDLILLSVKAFSLAAAMDELHQLCYGELDDRRTERLARVDAAPGQRRF
SIO_010081: SGP1_RS01495
subclass of: SO_0000673
so part of: SGP1_RS01495
location: complement(296183..296398)
location: region:296183-296398:-1
so has part: feature:296183-296398:-1:exon

WP_243466243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:296183-296398:-1:exon

SGP1_RS26250
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS26250
pseudo: true
so part of: sequence
location: complement(296593..>296872)
location: region:296593-296872:-1
so has part: feature:296593-296872:-1:exon
subclass of: SO_0000010

position:296593:-1
position: 296593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296872:-1
position: 296872
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296593-296872:-1:exon

SGP1_RS26250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS26250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013025127.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: glycoside hydrolase family 15 protein
SIO_010081: SGP1_RS26250
subclass of: SO_0000673
so part of: SGP1_RS26250
location: complement(296593..>296872)
location: region:296593-296872:-1
so has part: feature:296593-296872:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:296593-296872:-1:exon

SGP1_RS26255
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS26255
pseudo: true
so part of: sequence
location: complement(<296907..297654)
location: region:296907-297654:-1
so has part: feature:296907-297654:-1:exon
subclass of: SO_0000010

position:296907:-1
position: 296907
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:297654:-1
position: 297654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296907-297654:-1:exon

SGP1_RS26255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS26255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013575258.1
GO function: GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: iron-containing alcohol dehydrogenase
SIO_010081: SGP1_RS26255
subclass of: SO_0000673
so part of: SGP1_RS26255
location: complement(<296907..297654)
location: region:296907-297654:-1
so has part: feature:296907-297654:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:296907-297654:-1:exon

SGP1_RS32380
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS32380
so part of: sequence
location: 298208..298423
location: region:298208-298423:1
so has part: feature:298208-298423:1:exon
subclass of: SO_0000010

position:298208:1
position: 298208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298423:1
position: 298423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298208-298423:1:exon

SGP1_RS32380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS32380
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MADAWQQAWSPEWRFGSAALLVLLVWGFSSRWLDKPLGWFSIHVLPEGRLRRSFLACSTALVTVLSVGVGA
SIO_010081: SGP1_RS32380
subclass of: SO_0000673
so part of: SGP1_RS32380
location: 298208..298423
location: region:298208-298423:1
so has part: feature:298208-298423:1:exon

WP_041866527.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:298208-298423:1:exon

SGP1_RS32385
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS32385
so part of: sequence
location: 298424..298786
location: region:298424-298786:1
so has part: feature:298424-298786:1:exon
subclass of: SO_0000010

position:298424:1
position: 298424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298786:1
position: 298786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298424-298786:1:exon

SGP1_RS32385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS32385
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLYWLLTRLPDVSDELVDFADGVLRLTFFASLIAGLGRAFLSNHRPSWRLPAILDAIALAMKLPPLLATFVLISGAIEQLNSSVGTSVSTTHFRLWAFGAARGYRQNAADCVWRRGPDQR
SIO_010081: SGP1_RS32385
subclass of: SO_0000673
so part of: SGP1_RS32385
location: 298424..298786
location: region:298424-298786:1
so has part: feature:298424-298786:1:exon

WP_041866528.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:298424-298786:1:exon

SGP1_RS32390
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS32390
old locus tag: SG0168
so part of: sequence
location: 298755..299255
location: region:298755-299255:1
so has part: feature:298755-299255:1:exon
subclass of: SO_0000010

position:298755:1
position: 298755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299255:1
position: 299255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298755-299255:1:exon

SGP1_RS32390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS32390
old locus tag: SG0168
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFGAVALINGNFGSTTPLALLHKVLEVWDGKGLEKLNIVPAHVLNALIFLAIALYVLRSARRWLEKNFLPKTMMEPGMRFSLVTLFSNVGYVLGSCWRCPPSAYSGIIWPGSSARCRWGSVLVCWRPREHEAIQSAPAPSVTFSQLTPLGIVLSVTGFVSSPRVVA
SIO_010081: SGP1_RS32390
subclass of: SO_0000673
so part of: SGP1_RS32390
location: 298755..299255
location: region:298755-299255:1
so has part: feature:298755-299255:1:exon

WP_041866529.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:298755-299255:1:exon

SGP1_RS01520
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01520
pseudo: true
so part of: sequence
location: complement(299475..299989)
location: region:299475-299989:-1
so has part: feature:299475-299989:-1:exon
subclass of: SO_0000010

position:299475:-1
position: 299475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299989:-1
position: 299989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299475-299989:-1:exon

SGP1_RS01520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01520
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013202238.1
GO function: GO:0008080 - N-acetyltransferase activity [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
SIO_010081: SGP1_RS01520
subclass of: SO_0000673
so part of: SGP1_RS01520
location: complement(299475..299989)
location: region:299475-299989:-1
so has part: feature:299475-299989:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:299475-299989:-1:exon

SGP1_RS01525
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01525
so part of: sequence
location: 300468..300653
location: region:300468-300653:1
so has part: feature:300468-300653:1:exon
subclass of: SO_0000010

position:300468:1
position: 300468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300653:1
position: 300653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300468-300653:1:exon

SGP1_RS01525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01525
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNIAHYLELQGMKKGRLEGLMEGMRKGMLEGLLEGMDKGRLEGKKEGRRQATLSICMRNIS
SIO_010081: SGP1_RS01525
subclass of: SO_0000673
so part of: SGP1_RS01525
location: 300468..300653
location: region:300468-300653:1
so has part: feature:300468-300653:1:exon

WP_041866530.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:300468-300653:1:exon

SGP1_RS26260
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS26260
pseudo: true
so part of: sequence
location: complement(300967..301627)
location: region:300967-301627:-1
so has part: feature:300967-301627:-1:exon
subclass of: SO_0000010

position:300967:-1
position: 300967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301627:-1
position: 301627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300967-301627:-1:exon

SGP1_RS26260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS26260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_042650430.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: SGP1_RS26260
subclass of: SO_0000673
so part of: SGP1_RS26260
location: complement(300967..301627)
location: region:300967-301627:-1
so has part: feature:300967-301627:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:300967-301627:-1:exon

SGP1_RS26265
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS26265
pseudo: true
so part of: sequence
location: 301967..302891
location: region:301967-302891:1
so has part: feature:301967-302891:1:exon
subclass of: SO_0000010

position:301967:1
position: 301967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302891:1
position: 302891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:301967-302891:1:exon

SGP1_RS26265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS26265
inference: COORDINATES: similar to AA sequence:RefSeq:WP_032491235.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5 family transposase
SIO_010081: SGP1_RS26265
subclass of: SO_0000673
so part of: SGP1_RS26265
location: 301967..302891
location: region:301967-302891:1
so has part: feature:301967-302891:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:301967-302891:1:exon

SGP1_RS01550
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01550
old locus tag: SG0169
so part of: sequence
location: complement(303727..304431)
location: region:303727-304431:-1
so has part: feature:303727-304431:-1:exon
subclass of: SO_0000010

position:303727:-1
position: 303727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304431:-1
position: 304431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:303727-304431:-1:exon

SGP1_RS01550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01550
old locus tag: SG0169
inference: COORDINATES: protein motif:HMM:NF019310.2
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MFTTWRAVFAIMLGYALLTMATLWLMTHETLNRRAPLRLLTTFDHYYRLLMQRHFVLPALSIGSGVGGIYTLSIALPFVLIYRLRLSTFSFGLVMMFQTGSYITGSLLANRLLRLHSLTSIIRLGVSVIALGGILFLLLPHLCVPAVWVWISPAAIWVFGNALVAPGLTSFAMERQAEKAGSASALLGFIQIGIGFLDNTLLGSFYTDVAQGTAWLVPMSAFIAVSCGLASKRA
SIO_010081: SGP1_RS01550
subclass of: SO_0000673
so part of: SGP1_RS01550
location: complement(303727..304431)
location: region:303727-304431:-1
so has part: feature:303727-304431:-1:exon

WP_041866534.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:303727-304431:-1:exon

SGP1_RS26270
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS26270
pseudo: true
so part of: sequence
location: complement(<304469..305011)
location: region:304469-305011:-1
so has part: feature:304469-305011:-1:exon
subclass of: SO_0000010

position:304469:-1
position: 304469
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:305011:-1
position: 305011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304469-305011:-1:exon

SGP1_RS26270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS26270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611483.1
note: internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: SGP1_RS26270
subclass of: SO_0000673
so part of: SGP1_RS26270
location: complement(<304469..305011)
location: region:304469-305011:-1
so has part: feature:304469-305011:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:304469-305011:-1:exon

SGP1_RS01555
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01555
pseudo: true
so part of: sequence
location: complement(305423..306438)
location: region:305423-306438:-1
so has part: feature:305423-306438:-1:exon
subclass of: SO_0000010

position:305423:-1
position: 305423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306438:-1
position: 306438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305423-306438:-1:exon

SGP1_RS01555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01555
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004093373.1
GO function: GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: iron-containing alcohol dehydrogenase
SIO_010081: SGP1_RS01555
subclass of: SO_0000673
so part of: SGP1_RS01555
location: complement(305423..306438)
location: region:305423-306438:-1
so has part: feature:305423-306438:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:305423-306438:-1:exon

SGP1_RS01560
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01560
so part of: sequence
location: complement(306564..306815)
location: region:306564-306815:-1
so has part: feature:306564-306815:-1:exon
subclass of: SO_0000010

position:306564:-1
position: 306564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306815:-1
position: 306815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:306564-306815:-1:exon

SGP1_RS01560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01560
inference: COORDINATES: protein motif:HMM:NF013722.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MaoC/PaaZ C-terminal domain-containing protein
translation: MFIDKYFEEFVLGETRTTTGRTITESDIVLHAGMTAGDINSRAMTYGYEKLNFPEPVFIGDTLQVKVSISEKRTIRVDRATAW
SIO_010081: SGP1_RS01560
subclass of: SO_0000673
so part of: SGP1_RS01560
location: complement(306564..306815)
location: region:306564-306815:-1
so has part: feature:306564-306815:-1:exon

WP_050747321.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:306564-306815:-1:exon

SGP1_RS01565
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01565
old locus tag: SG0170
so part of: sequence
location: complement(306905..307168)
location: region:306905-307168:-1
so has part: feature:306905-307168:-1:exon
subclass of: SO_0000010

position:306905:-1
position: 306905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307168:-1
position: 307168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:306905-307168:-1:exon

SGP1_RS01565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01565
old locus tag: SG0170
inference: COORDINATES: protein motif:HMM:NF017174.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: L-rhamnose mutarotase
translation: MKSIRRFGGVIKVKPDKYAYYAQLHANPWPDVNAMIKKCNIANYSIYFKDGYLFSYYEYHGDNYQEDMKKMAVDPVTKKWWAECVPA
SIO_010081: SGP1_RS01565
subclass of: SO_0000673
so part of: SGP1_RS01565
location: complement(306905..307168)
location: region:306905-307168:-1
so has part: feature:306905-307168:-1:exon

WP_011410034.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:306905-307168:-1:exon

SGP1_RS01570
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01570
so part of: sequence
location: complement(307351..308061)
location: region:307351-308061:-1
so has part: feature:307351-308061:-1:exon
subclass of: SO_0000010

position:307351:-1
position: 307351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308061:-1
position: 308061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307351-308061:-1:exon

SGP1_RS01570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01570
inference: COORDINATES: protein motif:HMM:NF012904.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dihydrodipicolinate synthase family protein
translation: MPLVPTLFDEQEQFDEAAMGRLIDYLLTTEVDGLFFLGSAGEFAHMSDALRVQVMKFCITHVAGRKPVLVGIAHSGTQATLAFGRLAQEYGADGVVVVNPWYNPLAEEYLFEHYRYIAEYLPLPILLYNFPALTGQSIPVACIVRLAQACLNIVGLKDTVDTLSHIREVIHAVKPVRPDFAVFAGYDEYLLGTLILGGDGAIPARANFAPQLTCGIYRHWQQKEFDQANALQSRLS
SIO_010081: SGP1_RS01570
subclass of: SO_0000673
so part of: SGP1_RS01570
location: complement(307351..308061)
location: region:307351-308061:-1
so has part: feature:307351-308061:-1:exon

WP_243466244.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:307351-308061:-1:exon

SGP1_RS26275
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS26275
so part of: sequence
location: complement(308149..308391)
location: region:308149-308391:-1
so has part: feature:308149-308391:-1:exon
subclass of: SO_0000010

position:308149:-1
position: 308149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308391:-1
position: 308391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308149-308391:-1:exon

SGP1_RS26275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS26275
inference: COORDINATES: protein motif:HMM:NF016777.2
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amidohydrolase family protein
translation: MSGVIIPSEGDIGLVRPAVEIVLKTFSRDKVIFASNFPVCDLGTGMVPWIDVMMDITRAFGHVYQTHLFSDNAVRLYRLS
SIO_010081: SGP1_RS26275
subclass of: SO_0000673
so part of: SGP1_RS26275
location: complement(308149..308391)
location: region:308149-308391:-1
so has part: feature:308149-308391:-1:exon

WP_050747322.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:308149-308391:-1:exon

SGP1_RS26280
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS26280
so part of: sequence
location: complement(308653..309015)
location: region:308653-309015:-1
so has part: feature:308653-309015:-1:exon
subclass of: SO_0000010

position:308653:-1
position: 308653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309015:-1
position: 309015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308653-309015:-1:exon

SGP1_RS26280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS26280
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLHITDTHLHLWDLSRFRLPWLDAVPALQHDVAWADYPTCAPDGHWCIDRALYVEVDVAPVQRQQEARYLRELCEEPANAVCGGIISLDLQQPDAVARCREANTIHRWVKGVRHVLHVPS
SIO_010081: SGP1_RS26280
subclass of: SO_0000673
so part of: SGP1_RS26280
location: complement(308653..309015)
location: region:308653-309015:-1
so has part: feature:308653-309015:-1:exon

WP_050747323.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:308653-309015:-1:exon

SGP1_RS01580
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01580
old locus tag: SG0171
so part of: sequence
location: complement(309026..310099)
location: region:309026-310099:-1
so has part: feature:309026-310099:-1:exon
subclass of: SO_0000010

position:309026:-1
position: 309026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310099:-1
position: 310099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309026-310099:-1:exon

SGP1_RS01580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01580
old locus tag: SG0171
inference: COORDINATES: protein motif:HMM:NF014893.2
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Gfo/Idh/MocA family oxidoreductase
translation: MPISTKHPLPVNPKAIAIIGAGGIVTDSHLPAYRKAGFKVFALYDRDKQKAHSVARQWQIPHCCDTLEDLIAQGVAEECVFDIAVPASEILAILQKLPERVGVLIQKPMGESLTQAKAILDCCRQKGLIAGINFQLRRAPFMMAAKQLVMENRLGEIHDVEMRVICQTPWNLWQFLFEKERMEVNYHSIHYIDVIRFFLGDPQAVYCKTMKHPKILELAQTRSSIILDYGDIVRANIHTNHGHDYAPDKQECFFKIEGTRGAIKIQIGVILNYPKGSVDKFEYVLDDGKGWREISIDGTWFPDAFIGPMAGLQCKIEDDNYHYLNSVEDAWKTMCVVEACYRSSAKGAIPVTYQDNH
SIO_010081: SGP1_RS01580
subclass of: SO_0000673
so part of: SGP1_RS01580
location: complement(309026..310099)
location: region:309026-310099:-1
so has part: feature:309026-310099:-1:exon

WP_011410035.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:309026-310099:-1:exon

SGP1_RS31820
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS31820
so part of: sequence
location: complement(310114..310434)
location: region:310114-310434:-1
so has part: feature:310114-310434:-1:exon
subclass of: SO_0000010

position:310114:-1
position: 310114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310434:-1
position: 310434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310114-310434:-1:exon

SGP1_RS31820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS31820
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDAEQEPHLQRFFTPRIVLCLVQGAATPAASGSVRSVYMPKTALLGNLGPVIGWIAFLSGALIISNAWALKTGEWRGYERPKKVMLLGSVVLVLSVALVGYANGLA
SIO_010081: SGP1_RS31820
subclass of: SO_0000673
so part of: SGP1_RS31820
location: complement(310114..310434)
location: region:310114-310434:-1
so has part: feature:310114-310434:-1:exon

WP_198408761.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:310114-310434:-1:exon

SGP1_RS31825
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS31825
so part of: sequence
location: complement(310560..310952)
location: region:310560-310952:-1
so has part: feature:310560-310952:-1:exon
subclass of: SO_0000010

position:310560:-1
position: 310560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310952:-1
position: 310952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310560-310952:-1:exon

SGP1_RS31825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS31825
inference: COORDINATES: protein motif:HMM:NF018123.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015153 - rhamnose transmembrane transporter activity [Evidence IEA]
GO process: GO:0008645 - hexose transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: L-rhamnose/proton symporter RhaT
translation: MRYILATPTWVLAIAATCGFLWGISAIWYGKGIDSIGLSLTVGINTSVGCSLGSLIPLFILGTLLPARSLSWLLAGMAVMIVGVSIITHAGILKDQQSKLEISRVKNEKFVSILLMALASGFSTAAMNIV
SIO_010081: SGP1_RS31825
subclass of: SO_0000673
so part of: SGP1_RS31825
location: complement(310560..310952)
location: region:310560-310952:-1
so has part: feature:310560-310952:-1:exon

WP_050747325.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:310560-310952:-1:exon

SGP1_RS23035
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS23035
so part of: sequence
location: 311604..311975
location: region:311604-311975:1
so has part: feature:311604-311975:1:exon
subclass of: SO_0000010

position:311604:1
position: 311604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311975:1
position: 311975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311604-311975:1:exon

SGP1_RS23035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS23035
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLPLQDYLSAAYLADQAANSVGGSHESYDFQGFQSALAIDAATLVAVYRPDHLSAGRLTLPATWGQLLALAQEGRVIYAGIPINMLMDFLMLCAIRGGAWFDGETIADRETGIEALEELRETE
SIO_010081: SGP1_RS23035
subclass of: SO_0000673
so part of: SGP1_RS23035
location: 311604..311975
location: region:311604-311975:1
so has part: feature:311604-311975:1:exon

WP_050747326.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:311604-311975:1:exon

SGP1_RS01595
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01595
old locus tag: SG0172
so part of: sequence
location: 311978..312904
location: region:311978-312904:1
so has part: feature:311978-312904:1:exon
subclass of: SO_0000010

position:311978:1
position: 311978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312904:1
position: 312904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311978-312904:1:exon

SGP1_RS01595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01595
old locus tag: SG0172
EC number: 2.8.3.-
inference: COORDINATES: protein motif:HMM:NF014564.2
GO function: GO:0016740 - transferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CoA transferase
translation: MLPLAGLMVLDFSQYLAGPSAALRLADMGARVIKVERLGRGDGSRRLNLRNQWVDDDSVLFHTINRGKESFMADLKDSRALVRVKQLIAQADVLIENFRPGVMDNIGLGYDAVKMLNSRLVYASVTGYGTRGRWAKKAGLLIQAMSGLTWLNGDFDQPPTPFTLSVADSLAGAHLVEGILACLFRRGRTQQGGRVDISLMESLLGMQFEVLTTWLNDGHQPPRRCAKNNAHAWLSAPYGIYQTADGYIALAMGSVTDLARIFASDRLAAYHDPTSWFRCRDDIKAIIANCTRQRSTAHWLTLRQQQGY
SIO_010081: SGP1_RS01595
subclass of: SO_0000673
so part of: SGP1_RS01595
location: 311978..312904
location: region:311978-312904:1
so has part: feature:311978-312904:1:exon

WP_011410036.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:311978-312904:1:exon

SGP1_RS31830
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS31830
so part of: sequence
location: 312962..313126
location: region:312962-313126:1
so has part: feature:312962-313126:1:exon
subclass of: SO_0000010

position:312962:1
position: 312962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313126:1
position: 313126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312962-313126:1:exon

SGP1_RS31830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS31830
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTQRVRLPAGGEITLLRSPLRFNGVRPEIGRPAPRLGADTTRMSAELNLKEADV
SIO_010081: SGP1_RS31830
subclass of: SO_0000673
so part of: SGP1_RS31830
location: 312962..313126
location: region:312962-313126:1
so has part: feature:312962-313126:1:exon

WP_198408762.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:312962-313126:1:exon

SGP1_RS01600
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01600
so part of: sequence
location: 313145..313954
location: region:313145-313954:1
so has part: feature:313145-313954:1:exon
subclass of: SO_0000010

position:313145:1
position: 313145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313954:1
position: 313954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313145-313954:1:exon

SGP1_RS01600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01600
inference: COORDINATES: protein motif:HMM:NF014564.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CaiB/BaiF CoA-transferase family protein
translation: MSSISANFFPDHRWLCGLVDLGASVTKIENPAGGDICRSLYISEWRIDGESTLFHAINRNKKSITVDLKDCAARAALRPLIEQADVVIFNYRPGVAQRLGLDYPSLKAMNPGLIYGEISGYGDRGPWVSRPGQDLLVQELSGICCLNGNASQPPLPLGLSVSDIFAGDYLVQGIIAALVHRIHAGSGCLVQVSLLETLLDLQFEVLTTWLNDGREIPSGARSIMPTRMSRLPMASTRRISRAGDGAAAASGGTVGLSAISGVFRAAKRL
SIO_010081: SGP1_RS01600
subclass of: SO_0000673
so part of: SGP1_RS01600
location: 313145..313954
location: region:313145-313954:1
so has part: feature:313145-313954:1:exon

WP_198408763.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:313145-313954:1:exon

SGP1_RS34860
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS34860
so part of: sequence
location: 313926..314237
location: region:313926-314237:1
so has part: feature:313926-314237:1:exon
subclass of: SO_0000010

position:313926:1
position: 313926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314237:1
position: 314237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313926-314237:1:exon

SGP1_RS34860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS34860
inference: COORDINATES: protein motif:HMM:NF014564.2
GO function: GO:0008410 - CoA-transferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CoA transferase
translation: MYSEPQSAFDRRYEIKTLLLHHLRQQTSAHWLTVLEKEDIWCANVLDWEQLIASEGFKALEMVQRLTLHSGKTLLTTRCPIRIDGEIFVSPVGAPPLGADNPV
SIO_010081: SGP1_RS34860
subclass of: SO_0000673
so part of: SGP1_RS34860
location: 313926..314237
location: region:313926-314237:1
so has part: feature:313926-314237:1:exon

WP_279379428.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:313926-314237:1:exon

SGP1_RS34865
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS34865
so part of: sequence
location: complement(314506..314625)
location: region:314506-314625:-1
so has part: feature:314506-314625:-1:exon
subclass of: SO_0000010

position:314506:-1
position: 314506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314625:-1
position: 314625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314506-314625:-1:exon

SGP1_RS34865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS34865
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: IclR family transcriptional regulator C-terminal domain-containing protein
translation: MRNIGNHLPAHCTAVGKVLLSQFSDEHITHLYGDPPLKK
SIO_010081: SGP1_RS34865
subclass of: SO_0000673
so part of: SGP1_RS34865
location: complement(314506..314625)
location: region:314506-314625:-1
so has part: feature:314506-314625:-1:exon

WP_083764633.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:314506-314625:-1:exon

SGP1_RS01605
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01605
so part of: sequence
location: complement(314638..314952)
location: region:314638-314952:-1
so has part: feature:314638-314952:-1:exon
subclass of: SO_0000010

position:314638:-1
position: 314638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314952:-1
position: 314952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314638-314952:-1:exon

SGP1_RS01605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01605
inference: COORDINATES: protein motif:HMM:NF020897.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MAKVKSAERTFRLVELIASHREGLTFSQLQASLVIPRSSAHSLIQEFLDNDYLLYVAANCIESTDLIRDLRLLTAFLSKKLSKTTHAAILDGTQVIYLVKAHAQ
SIO_010081: SGP1_RS01605
subclass of: SO_0000673
so part of: SGP1_RS01605
location: complement(314638..314952)
location: region:314638-314952:-1
so has part: feature:314638-314952:-1:exon

WP_041866535.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:314638-314952:-1:exon

SGP1_RS01610
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01610
old locus tag: SG0173
so part of: sequence
location: complement(314962..315669)
location: region:314962-315669:-1
so has part: feature:314962-315669:-1:exon
subclass of: SO_0000010

position:314962:-1
position: 314962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315669:-1
position: 315669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314962-315669:-1:exon

SGP1_RS01610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01610
old locus tag: SG0173
inference: COORDINATES: protein motif:HMM:NF019349.2
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GntR family transcriptional regulator
translation: MDVIALKKVTLTEQIMEQIASQITSGKLKPGQRLPNERAMGEMFNVTRSRVREALRALSLIGLIEIKPGDGSYVCENKPHLPEETITWIFNKEIHNLDEVYAARKLIEEEVFLTAVDTASNDDIIRLQSIMDNMTEVPLAGGKPEDYHLLLDEYDLLMGRIFGNQIYDKLMQTIIMLRKDFSHKLLKAEDAMAHSLKLRLKIHDAFVERDKAQLKKNLHTFFQSSRKFYDKMADN
SIO_010081: SGP1_RS01610
subclass of: SO_0000673
so part of: SGP1_RS01610
location: complement(314962..315669)
location: region:314962-315669:-1
so has part: feature:314962-315669:-1:exon

WP_011410037.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:314962-315669:-1:exon

SGP1_RS01615
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01615
pseudo: true
so part of: sequence
location: 315887..>316094
location: region:315887-316094:1
so has part: feature:315887-316094:1:exon
subclass of: SO_0000010

position:315887:1
position: 315887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316094:1
position: 316094
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315887-316094:1:exon

SGP1_RS01615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01615
inference: COORDINATES: similar to AA sequence:RefSeq:NP_460522.1
GO function: GO:0004601 - peroxidase activity [Evidence IEA]
GO process: GO:0006979 - response to oxidative stress [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: OsmC family peroxiredoxin
SIO_010081: SGP1_RS01615
subclass of: SO_0000673
so part of: SGP1_RS01615
location: 315887..>316094
location: region:315887-316094:1
so has part: feature:315887-316094:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:315887-316094:1:exon

SGP1_RS01620
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01620
pseudo: true
so part of: sequence
location: complement(<316117..316545)
location: region:316117-316545:-1
so has part: feature:316117-316545:-1:exon
subclass of: SO_0000010

position:316117:-1
position: 316117
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:316545:-1
position: 316545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:316117-316545:-1:exon

SGP1_RS01620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01620
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410900.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5 family transposase
SIO_010081: SGP1_RS01620
subclass of: SO_0000673
so part of: SGP1_RS01620
location: complement(<316117..316545)
location: region:316117-316545:-1
so has part: feature:316117-316545:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:316117-316545:-1:exon

SGP1_RS01625
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01625
so part of: sequence
location: 316653..317036
location: region:316653-317036:1
so has part: feature:316653-317036:1:exon
subclass of: SO_0000010

position:316653:1
position: 316653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317036:1
position: 317036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:316653-317036:1:exon

SGP1_RS01625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01625
inference: COORDINATES: protein motif:HMM:NF013088.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EamA family transporter
translation: MAHPYLLLMGLLIALFSSSVPMSLEMAALKRLPHKTFGILVSMEPAIVAIIAFITLSEHLTFTQVIAIVFLHHRRRAMTRHRRLYGGKMLPGAAFRGGRRCVRNRRQHAWHDCPLFTAGKQKLESIK
SIO_010081: SGP1_RS01625
subclass of: SO_0000673
so part of: SGP1_RS01625
location: 316653..317036
location: region:316653-317036:1
so has part: feature:316653-317036:1:exon

WP_041866536.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:316653-317036:1:exon

SGP1_RS01630
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01630
old locus tag: SG0174
so part of: sequence
location: 317677..319107
location: region:317677-319107:1
so has part: feature:317677-319107:1:exon
subclass of: SO_0000010

position:317677:1
position: 317677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319107:1
position: 319107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317677-319107:1:exon

SGP1_RS01630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01630
old locus tag: SG0174
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017348137.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amino acid permease
translation: MKNVKASGASPSLGGGLSNRQVTMISIAGIIGAGLFIGSANAIAITGPAILISYAIAGLLVLLVMRMLCEMAVAQPDSGSFSTYAARAIGPWAGFTIGWLYWWFWVLVIPVEAIAGADILHAWFPSVAPWVFAVGIMALLTLTNLCHVRHFGEFEFWLSLVKVLAIIAFIVIGTLAVMGFWPLADVSGTARLFSHGGFMPNGPGAVLGGVLVTIFSFFGAEILSIAAVESQEPARQIRKSTNLIIYRIALFYILSIFLVVCLVDWDDPALPRQGTFQYVLSVLNVPGAKRIMDFVVLIAVSSCMNSALYTASRMFYALARRGDAPALGKRVSRHGTPCIAVLASTLAGFLGCLVNYLFPGKVFGFLLSSTGAVALLVYLFIAVSQLRMRGILERQGQPPQFKMWLFPWLNWLSIGIIASVLGYMACAPSYRYEALMTGVVALIVFLFSLMVCRHRAAESVTQLTPAREMDIEPTRL
SIO_010081: SGP1_RS01630
subclass of: SO_0000673
so part of: SGP1_RS01630
location: 317677..319107
location: region:317677-319107:1
so has part: feature:317677-319107:1:exon

WP_011410038.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:317677-319107:1:exon

SGP1_RS01635
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01635
old locus tag: SG0175
so part of: sequence
location: 319421..320692
location: region:319421-320692:1
so has part: feature:319421-320692:1:exon
subclass of: SO_0000010

position:319421:1
position: 319421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320692:1
position: 320692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:319421-320692:1:exon

SGP1_RS01635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01635
old locus tag: SG0175
EC number: 1.4.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009636184.1
GO function: GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Glu/Leu/Phe/Val dehydrogenase
translation: MSALSYVSTDNNSAWATFLAQVERVLPYLGDLALWADTLRHPKRALIVDIPLEMDDGTIRHFEGFRVQHNLSRGPGKGGVRFHPDVTLEEVMALSAWMTVKSAALNLPFGGAKGGIRVDPRELSEKELERLTRRYTSEIGTIIGPQQDIPAPDVGTNAQVMAWMMDTYSMNIGSTATGVVTGKPIHLGGSLGRVNATGRGVFVTGSSAAERIGLKVEDCRVAVQGFGNVGSVAAGLFHRAGAKVVAVQDHSVTLFEARGLDIPALAEYQRQHGAIAGFTGGTQLKEDEFWHQEYDIFLPAALEGVITPERARALQCRLVLEGANGPTLPGADDILRQRAITVVPDVICNAGGVTVSYFEWVQDFSSFFWSEQEINDRLDRIMRDALETVWQKADALDVTLRTAAYAVACERILMARRERGLYP
SIO_010081: SGP1_RS01635
subclass of: SO_0000673
so part of: SGP1_RS01635
location: 319421..320692
location: region:319421-320692:1
so has part: feature:319421-320692:1:exon

WP_011410039.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:319421-320692:1:exon

SGP1_RS34870
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: treA
locus tag: SGP1_RS34870
pseudo: true
so part of: sequence
location: complement(320951..>322447)
location: region:320951-322447:-1
so has part: feature:320951-322447:-1:exon
subclass of: SO_0000010

position:320951:-1
position: 320951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:322447:-1
position: 322447
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320951-322447:-1:exon

SGP1_RS34870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: treA
locus tag: SGP1_RS34870
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010669886.1
GO function: GO:0004555 - alpha,alpha-trehalase activity [Evidence IEA]
GO process: GO:0005991 - trehalose metabolic process [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: alpha,alpha-trehalase TreA
SIO_010081: SGP1_RS34870
subclass of: SO_0000673
so part of: SGP1_RS34870
location: complement(320951..>322447)
location: region:320951-322447:-1
so has part: feature:320951-322447:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:320951-322447:-1:exon

SGP1_RS01645
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01645
pseudo: true
so part of: sequence
location: 324391..325099
location: region:324391-325099:1
so has part: feature:324391-325099:1:exon
subclass of: SO_0000010

position:324391:1
position: 324391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325099:1
position: 325099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324391-325099:1:exon

SGP1_RS01645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01645
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017799105.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: MgtC family protein
SIO_010081: SGP1_RS01645
subclass of: SO_0000673
so part of: SGP1_RS01645
location: 324391..325099
location: region:324391-325099:1
so has part: feature:324391-325099:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:324391-325099:1:exon

SGP1_RS01650
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: mgtA
locus tag: SGP1_RS01650
pseudo: true
so part of: sequence
location: 325306..327976
location: region:325306-327976:1
so has part: feature:325306-327976:1:exon
subclass of: SO_0000010

position:325306:1
position: 325306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:327976:1
position: 327976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:325306-327976:1:exon

SGP1_RS01650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: mgtA
locus tag: SGP1_RS01650
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004173606.1
GO function: GO:0015444 - P-type magnesium transporter activity [Evidence IEA]
GO process: GO:0015693 - magnesium ion transport [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: magnesium-translocating P-type ATPase
SIO_010081: SGP1_RS01650
subclass of: SO_0000673
so part of: SGP1_RS01650
location: 325306..327976
location: region:325306-327976:1
so has part: feature:325306-327976:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:325306-327976:1:exon

SGP1_RS31635
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS31635
pseudo: true
so part of: sequence
location: complement(328323..>329042)
location: region:328323-329042:-1
so has part: feature:328323-329042:-1:exon
subclass of: SO_0000010

position:328323:-1
position: 328323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329042:-1
position: 329042
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328323-329042:-1:exon

SGP1_RS31635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS31635
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019725253.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: substrate-binding domain-containing protein
SIO_010081: SGP1_RS31635
subclass of: SO_0000673
so part of: SGP1_RS31635
location: complement(328323..>329042)
location: region:328323-329042:-1
so has part: feature:328323-329042:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:328323-329042:-1:exon

SGP1_RS31640
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS31640
pseudo: true
so part of: sequence
location: complement(<329043..329765)
location: region:329043-329765:-1
so has part: feature:329043-329765:-1:exon
subclass of: SO_0000010

position:329043:-1
position: 329043
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:329765:-1
position: 329765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329043-329765:-1:exon

SGP1_RS31640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS31640
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005224866.1
note: catalyzes the interconversion of D-xylose to D-xylulose; frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: xylose isomerase
SIO_010081: SGP1_RS31640
subclass of: SO_0000673
so part of: SGP1_RS31640
location: complement(<329043..329765)
location: region:329043-329765:-1
so has part: feature:329043-329765:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:329043-329765:-1:exon

SGP1_RS01670
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: xylF
locus tag: SGP1_RS01670
old locus tag: SG0176
pseudo: true
so part of: sequence
location: 330237..331231
location: region:330237-331231:1
so has part: feature:330237-331231:1:exon
subclass of: SO_0000010

position:330237:1
position: 330237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331231:1
position: 331231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330237-331231:1:exon

SGP1_RS01670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: xylF
locus tag: SGP1_RS01670
old locus tag: SG0176
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004391154.1
GO process: GO:0015753 - D-xylose transmembrane transport [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: D-xylose ABC transporter substrate-binding protein
SIO_010081: SGP1_RS01670
subclass of: SO_0000673
so part of: SGP1_RS01670
location: 330237..331231
location: region:330237-331231:1
so has part: feature:330237-331231:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:330237-331231:1:exon

SGP1_RS31840
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS31840
pseudo: true
so part of: sequence
location: <331269..>332412
location: region:331269-332412:1
so has part: feature:331269-332412:1:exon
subclass of: SO_0000010

position:331269:1
position: 331269
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:332412:1
position: 332412
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:331269-332412:1:exon

SGP1_RS31840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS31840
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012105953.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ATP-binding cassette domain-containing protein
SIO_010081: SGP1_RS31840
subclass of: SO_0000673
so part of: SGP1_RS31840
location: <331269..>332412
location: region:331269-332412:1
so has part: feature:331269-332412:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:331269-332412:1:exon

SGP1_RS01680
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: agaR
locus tag: SGP1_RS01680
pseudo: true
so part of: sequence
location: <332406..333009
location: region:332406-333009:1
so has part: feature:332406-333009:1:exon
subclass of: SO_0000010

position:332406:1
position: 332406
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:333009:1
position: 333009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332406-333009:1:exon

SGP1_RS01680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: agaR
locus tag: SGP1_RS01680
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004938263.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transcriptional repressor AgaR
SIO_010081: SGP1_RS01680
subclass of: SO_0000673
so part of: SGP1_RS01680
location: <332406..333009
location: region:332406-333009:1
so has part: feature:332406-333009:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:332406-333009:1:exon

SGP1_RS01685
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01685
old locus tag: SG0177
pseudo: true
so part of: sequence
location: 333031..334319
location: region:333031-334319:1
so has part: feature:333031-334319:1:exon
subclass of: SO_0000010

position:333031:1
position: 333031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334319:1
position: 334319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333031-334319:1:exon

SGP1_RS01685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01685
old locus tag: SG0177
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004931807.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit
SIO_010081: SGP1_RS01685
subclass of: SO_0000673
so part of: SGP1_RS01685
location: 333031..334319
location: region:333031-334319:1
so has part: feature:333031-334319:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:333031-334319:1:exon

SGP1_RS01690
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01690
pseudo: true
so part of: sequence
location: 334312..335467
location: region:334312-335467:1
so has part: feature:334312-335467:1:exon
subclass of: SO_0000010

position:334312:1
position: 334312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335467:1
position: 335467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334312-335467:1:exon

SGP1_RS01690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01690
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017892968.1
GO function: GO:0097367 - carbohydrate derivative binding [Evidence IEA]
GO process: GO:1901135 - carbohydrate derivative metabolic process [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: SIS domain-containing protein
SIO_010081: SGP1_RS01690
subclass of: SO_0000673
so part of: SGP1_RS01690
location: 334312..335467
location: region:334312-335467:1
so has part: feature:334312-335467:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:334312-335467:1:exon

SGP1_RS01695
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01695
pseudo: true
so part of: sequence
location: 335458..336347
location: region:335458-336347:1
so has part: feature:335458-336347:1:exon
subclass of: SO_0000010

position:335458:1
position: 335458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336347:1
position: 336347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335458-336347:1:exon

SGP1_RS01695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01695
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011192902.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: tagatose-bisphosphate aldolase subunit GatY
SIO_010081: SGP1_RS01695
subclass of: SO_0000673
so part of: SGP1_RS01695
location: 335458..336347
location: region:335458-336347:1
so has part: feature:335458-336347:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:335458-336347:1:exon

SGP1_RS34875
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS34875
so part of: sequence
location: complement(336394..336525)
location: region:336394-336525:-1
so has part: feature:336394-336525:-1:exon
subclass of: SO_0000010

position:336394:-1
position: 336394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336525:-1
position: 336525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336394-336525:-1:exon

SGP1_RS34875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS34875
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIRSAGARRWLPLMVALLLCYGRQTGATVSACERSTLKTTQNV
SIO_010081: SGP1_RS34875
subclass of: SO_0000673
so part of: SGP1_RS34875
location: complement(336394..336525)
location: region:336394-336525:-1
so has part: feature:336394-336525:-1:exon

WP_279379429.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:336394-336525:-1:exon

SGP1_RS28960
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS28960
pseudo: true
so part of: sequence
location: 336553..>337493
location: region:336553-337493:1
so has part: feature:336553-337493:1:exon
subclass of: SO_0000010

position:336553:1
position: 336553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337493:1
position: 337493
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336553-337493:1:exon

SGP1_RS28960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS28960
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004160995.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ABC transporter transmembrane domain-containing protein
SIO_010081: SGP1_RS28960
subclass of: SO_0000673
so part of: SGP1_RS28960
location: 336553..>337493
location: region:336553-337493:1
so has part: feature:336553-337493:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:336553-337493:1:exon

SGP1_RS01710
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01710
pseudo: true
so part of: sequence
location: 337675..338330
location: region:337675-338330:1
so has part: feature:337675-338330:1:exon
subclass of: SO_0000010

position:337675:1
position: 337675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338330:1
position: 338330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337675-338330:1:exon

SGP1_RS01710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01710
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004718952.1
GO function: GO:0004089 - carbonate dehydratase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: carbonic anhydrase family protein
SIO_010081: SGP1_RS01710
subclass of: SO_0000673
so part of: SGP1_RS01710
location: 337675..338330
location: region:337675-338330:1
so has part: feature:337675-338330:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:337675-338330:1:exon

SGP1_RS01715
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01715
pseudo: true
so part of: sequence
location: 338427..339479
location: region:338427-339479:1
so has part: feature:338427-339479:1:exon
subclass of: SO_0000010

position:338427:1
position: 338427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339479:1
position: 339479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338427-339479:1:exon

SGP1_RS01715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01715
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008926336.1
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
SIO_010081: SGP1_RS01715
subclass of: SO_0000673
so part of: SGP1_RS01715
location: 338427..339479
location: region:338427-339479:1
so has part: feature:338427-339479:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:338427-339479:1:exon

SGP1_RS01720
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: fucR
locus tag: SGP1_RS01720
old locus tag: SG0178
so part of: sequence
location: complement(339582..340286)
location: region:339582-340286:-1
so has part: feature:339582-340286:-1:exon
subclass of: SO_0000010

position:339582:-1
position: 339582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340286:-1
position: 340286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339582-340286:-1:exon

SGP1_RS01720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: fucR
locus tag: SGP1_RS01720
old locus tag: SG0178
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005281009.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: L-fucose operon activator
translation: MKTTRQQDLVQLLHQHGSLTTEQLATMLNVSRETIRRDLNALQSQGKVLRQHGRARCVIGDSEDNGDPFLTRLKIQLNSKAEVARLALRWIDPGMCIALDASSTCWYLTKQLPDMDITVFTNSVRVCQALIKRQHIRLICSGGTLQRKYACYVNAAILSQLKNLEVDLFIFSCEGIDQAGVMWDSNLYNAGFKSLLLKRAAQSLLLIDKSKMHRTGEIRLGDISQVTEIITNKE
SIO_010081: SGP1_RS01720
subclass of: SO_0000673
so part of: SGP1_RS01720
location: complement(339582..340286)
location: region:339582-340286:-1
so has part: feature:339582-340286:-1:exon

WP_011410042.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:339582-340286:-1:exon

SGP1_RS01725
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: fucU
locus tag: SGP1_RS01725
old locus tag: SG0179
so part of: sequence
location: complement(340337..340759)
location: region:340337-340759:-1
so has part: feature:340337-340759:-1:exon
subclass of: SO_0000010

position:340337:-1
position: 340337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340759:-1
position: 340759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340337-340759:-1:exon

SGP1_RS01725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: fucU
locus tag: SGP1_RS01725
old locus tag: SG0179
EC number: 5.1.3.29
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000920848.1
GO function: GO:0042806 - fucose binding [Evidence IEA]; GO:0016854 - racemase and epimerase activity [Evidence IEA]
GO process: GO:0042354 - L-fucose metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: L-fucose mutarotase
translation: MLKILSPLISPDLLKTLSEMGHGDEIIFADAHFPAHRLNPHVIRADGLRIADLLAAIAPLFALDSYAPPVVMMAPVDGDVLDLSVELRYRQALFSEKSGAATEWINREAFYQRAGTAYALVVTGEAVRYGNILLKKGITF
SIO_010081: SGP1_RS01725
subclass of: SO_0000673
so part of: SGP1_RS01725
location: complement(340337..340759)
location: region:340337-340759:-1
so has part: feature:340337-340759:-1:exon

WP_011410043.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:340337-340759:-1:exon

SGP1_RS01730
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: fucK
locus tag: SGP1_RS01730
old locus tag: SG0180
so part of: sequence
location: complement(340761..342224)
location: region:340761-342224:-1
so has part: feature:340761-342224:-1:exon
subclass of: SO_0000010

position:340761:-1
position: 340761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342224:-1
position: 342224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340761-342224:-1:exon

SGP1_RS01730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: fucK
locus tag: SGP1_RS01730
old locus tag: SG0180
EC number: 2.7.1.51
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015460765.1
GO function: GO:0008737 - L-fuculokinase activity [Evidence IEA]
GO process: GO:0042355 - L-fucose catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: L-fuculokinase
translation: MNRDVVIVLDCGATSIRAIAVDAEGRLVAQATTPNATAPAAENPQWHIWPLEPLMQRFAYCCQQIMPQLRQDHIHALTVTAFGVDGAPVDQQGELLYPVISWKCPRTATVMEQIDRFISPTELQVLSGIGQFSFNTLYKLLWLKQNHPRLMEQAHCWLFLSSLINYRLTGEFTTDRTMAGTSQLLDVRQEKFSDTILQRTGLSSDLFPRLVAAGEVIGTLRASMAARLGLPVGLPVIATGHDTQFALFGSGAALDQAVLSSGTWEILMVRTPQVDTSLLPRYEGSTCELDSCRGLFNPGLQWLASGTLEWVRQLYWPDDPLPAAYDLMISEGRTIPPGCQGVRLQGQLLDCRRQTSWTGLSLYSSRGHFYRAALENLAWRLRHHLSVLQNIGGFRATGLLLVGGGSRNPLWNQIKADVLNMPINVLKDAETTVLGAAMFAWSGAGFYDSPETARQQVNYRYYRYYPGEQCANYQQMVEQLDAMTEGE
SIO_010081: SGP1_RS01730
subclass of: SO_0000673
so part of: SGP1_RS01730
location: complement(340761..342224)
location: region:340761-342224:-1
so has part: feature:340761-342224:-1:exon

WP_011410044.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:340761-342224:-1:exon

SGP1_RS01735
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01735
old locus tag: SG0181
so part of: sequence
location: complement(342261..344039)
location: region:342261-344039:-1
so has part: feature:342261-344039:-1:exon
subclass of: SO_0000010

position:342261:-1
position: 342261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344039:-1
position: 344039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:342261-344039:-1:exon

SGP1_RS01735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01735
old locus tag: SG0181
EC number: 5.3.1.25
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004706361.1
GO function: GO:0008736 - L-fucose isomerase activity [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]
GO process: GO:0019317 - fucose catabolic process [Evidence IEA]; GO:0005996 - monosaccharide metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: L-fucose isomerase
translation: MSETKNLPRVGIRPVIDGRRMGVRESLEAQTMAMARATAALISTRLRHACGTPVECVIAEQCIAGMAEAAACDAQFETCQVGLTLTVTPCWCYGSETIDMAPLRPKAIWGFNGTERPGAVYLAAALAAHNQKGLPAFSIYGREVQDAGDHHIPTDVQTRLLRFTRASLAVAAMKGRSYLSLGGVSMGIAGSIVDHHFFEAWLGMKVQTVDMTELRRRIENEIYDRDELALALAWAEANFRFGQDTNAAEHRRSPEGYRGVLRESLQMTLCIRDMMQGNPRLISLGFTEEAQGYDAIAAGFQGQRHWTDQYANGDIAEALLNSAFDWRGVRQPLIVATENDSLNAVAMLFGHLLTGSAQVFTDVRSYWSPEAVKRVTGQTLEGNAAPGVIHLINSGSAALDGACRQRDAQGRPTIKPHWEITQQEAATCLAATEWCPAIHEYFRGGGFSSRFLTLGGVPFTLSRINLIRGLGPVMQIAEGWSVDLPPAIHKHLDNRTNATWPTTWFVPRLTDRGPFKNVWSVMAHWGANHGVLTAGHVGADLMTLAAMLRIPVCMHNVAEEHIFRPSAWASHGMDLEGQDYRACRNYGPLYRN
SIO_010081: SGP1_RS01735
subclass of: SO_0000673
so part of: SGP1_RS01735
location: complement(342261..344039)
location: region:342261-344039:-1
so has part: feature:342261-344039:-1:exon

WP_011410045.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:342261-344039:-1:exon

SGP1_RS01740
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: fucP
locus tag: SGP1_RS01740
old locus tag: SG0182
so part of: sequence
location: complement(344062..345390)
location: region:344062-345390:-1
so has part: feature:344062-345390:-1:exon
subclass of: SO_0000010

position:344062:-1
position: 344062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345390:-1
position: 345390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344062-345390:-1:exon

SGP1_RS01740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: fucP
locus tag: SGP1_RS01740
old locus tag: SG0182
inference: COORDINATES: similar to AA sequence:RefSeq:NP_417281.1
GO function: GO:0015150 - fucose transmembrane transporter activity [Evidence IEA]
GO process: GO:0015756 - fucose transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: L-fucose:H+ symporter permease
translation: MGNTLLPSEKYRVTSGPRNNNNLLPFTLLCSLFFLWAVANNLNDILLPQFQQAFDLNNFQAGLIQSSFYFGYFIIPIPAGILMKKINYKAGIITGLIFYAAGAALFWPAAQTMNYSLFLAGLFIIAAGLGCLETAANPFVTVLGPEESGHFRINLAQTFNSFGAIIAVVFGQSFILAHVPHQPPEVLDTMTAEALACYRHSLVMAVQTPYMLVVAVVLTVALLILLTPFPSIPSESGGGKSGGFYCAARRLLGYRHWRWAVLAQFCYVGAQTACWSYLIRYGVEEVPNMTPGFAANYLTATMVCFFVGRFSGTWLIRRFAPQDVLAVCALAAMSTCLIAAAGGHRGLVALTLCSLFMSIQYPTIFSLGIRQLEHDTKYGASIIVMTIVGGGIVTPVMGYVSDAAGAIAPAELIPALCFGVIFFFARFRYGVKPEAGVATASH
SIO_010081: SGP1_RS01740
subclass of: SO_0000673
so part of: SGP1_RS01740
location: complement(344062..345390)
location: region:344062-345390:-1
so has part: feature:344062-345390:-1:exon

WP_011410046.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:344062-345390:-1:exon

SGP1_RS01745
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01745
old locus tag: SG0183
so part of: sequence
location: 345894..346541
location: region:345894-346541:1
so has part: feature:345894-346541:1:exon
subclass of: SO_0000010

position:345894:1
position: 345894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:346541:1
position: 346541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345894-346541:1:exon

SGP1_RS01745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01745
old locus tag: SG0183
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001544902.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: L-fuculose-phosphate aldolase
translation: MNKTALARDIIATCLRMGKMGLNQGTAGNVSVRYHTGMLITPTGIPYEHLIERHIVFVDADGRTDSGKIPSSEWRFHQAVYRIRPDCHAVVHNHAVYSTAVSILNRPIPAIHYMIAAAGGDDVPCAPYATFGSRDLAAHVALAMRNRRATLLQHHGLVTCGENLARALWLAQEVEILARLYLTILPVIDPVPVLSGQEMARVLEKFQTYGLRVDG
SIO_010081: SGP1_RS01745
subclass of: SO_0000673
so part of: SGP1_RS01745
location: 345894..346541
location: region:345894-346541:1
so has part: feature:345894-346541:1:exon

WP_011410047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:345894-346541:1:exon

SGP1_RS31295
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS31295
pseudo: true
so part of: sequence
location: complement(346636..348097)
location: region:346636-348097:-1
so has part: feature:346636-348097:-1:exon
subclass of: SO_0000010

position:346636:-1
position: 346636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348097:-1
position: 348097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346636-348097:-1:exon

SGP1_RS31295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS31295
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013319954.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: serine hydrolase
SIO_010081: SGP1_RS31295
subclass of: SO_0000673
so part of: SGP1_RS31295
location: complement(346636..348097)
location: region:346636-348097:-1
so has part: feature:346636-348097:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:346636-348097:-1:exon

SGP1_RS32410
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS32410
so part of: sequence
location: complement(348113..348703)
location: region:348113-348703:-1
so has part: feature:348113-348703:-1:exon
subclass of: SO_0000010

position:348113:-1
position: 348113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348703:-1
position: 348703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:348113-348703:-1:exon

SGP1_RS32410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS32410
inference: COORDINATES: protein motif:HMM:NF014801.2
GO function: GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FGGY-family carbohydrate kinase
translation: MVASSIVSGVFASGDASIVAGTWSSNQVVVDKPDYLRPVFMNSIIEQDRYMAIEASATSAANLDWFVHELADGRGGQGAARSSEEVVSVLPDDRLPLYHPYLYSGRKAGPAKAGFYALAGWHTRADMLFALFEGVTFAHRAHIDRLRAAGIPFTHATRSCSWPQMFADVLNIPIRTAQCAETGALAPGDEVFLILA
SIO_010081: SGP1_RS32410
subclass of: SO_0000673
so part of: SGP1_RS32410
location: complement(348113..348703)
location: region:348113-348703:-1
so has part: feature:348113-348703:-1:exon

WP_050747334.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:348113-348703:-1:exon

SGP1_RS32415
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS32415
so part of: sequence
location: complement(348746..349375)
location: region:348746-349375:-1
so has part: feature:348746-349375:-1:exon
subclass of: SO_0000010

position:348746:-1
position: 348746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349375:-1
position: 349375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:348746-349375:-1:exon

SGP1_RS32415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS32415
inference: COORDINATES: protein motif:HMM:NF012589.2
GO function: GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FGGY family carbohydrate kinase
translation: MSHCLLGIDACNTMIKAVLFSLDGHVLSVAGRAGATHQPRAGYAERPIEAMWHDVSGAITDCLQQAGDAGRRVIAMGVAGHGNGLYALDPRQQPVIGIQSIDSRADALVRELERQGKHEAIYQRSLQTPWAAATPLLMSWLKRHDAALYRRIAHVLCAKDVISHFLCGSLTGDYSDVAGAGLIDYRRRGYDRELMALYDLPDALALPPV
SIO_010081: SGP1_RS32415
subclass of: SO_0000673
so part of: SGP1_RS32415
location: complement(348746..349375)
location: region:348746-349375:-1
so has part: feature:348746-349375:-1:exon

WP_050747335.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:348746-349375:-1:exon

SGP1_RS26320
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS26320
pseudo: true
so part of: sequence
location: complement(349433..>349621)
location: region:349433-349621:-1
so has part: feature:349433-349621:-1:exon
subclass of: SO_0000010

position:349433:-1
position: 349433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349621:-1
position: 349621
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349433-349621:-1:exon

SGP1_RS26320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS26320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013203905.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: aldolase
SIO_010081: SGP1_RS26320
subclass of: SO_0000673
so part of: SGP1_RS26320
location: complement(349433..>349621)
location: region:349433-349621:-1
so has part: feature:349433-349621:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:349433-349621:-1:exon

SGP1_RS31845
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS31845
so part of: sequence
location: complement(349642..349833)
location: region:349642-349833:-1
so has part: feature:349642-349833:-1:exon
subclass of: SO_0000010

position:349642:-1
position: 349642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349833:-1
position: 349833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349642-349833:-1:exon

SGP1_RS31845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS31845
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLENPGQDNHDRRVIAFINEMKTAFSDTKLVALVATNQDPSKVYNAVLSMLQAHPNLAVLFMP
SIO_010081: SGP1_RS31845
subclass of: SO_0000673
so part of: SGP1_RS31845
location: complement(349642..349833)
location: region:349642-349833:-1
so has part: feature:349642-349833:-1:exon

WP_198408765.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:349642-349833:-1:exon

SGP1_RS01760
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01760
old locus tag: SG0184
so part of: sequence
location: complement(349791..350318)
location: region:349791-350318:-1
so has part: feature:349791-350318:-1:exon
subclass of: SO_0000010

position:349791:-1
position: 349791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350318:-1
position: 350318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349791-350318:-1:exon

SGP1_RS01760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01760
old locus tag: SG0184
inference: COORDINATES: protein motif:HMM:NF024799.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: substrate-binding domain-containing protein
translation: MKKSYAVAACLLCTLTLAPAVKAADETPQFRCKPGETYYMNVMNTGVEYWFPVYEMFKQASHQLGCKTVYGGTPAYYVNQQLSSFEQVLAQKLAGIFLHPINPDPFIEPINRAAEMGIPVVTFAADSPNSKRVAYVTSDNFREGKRPWTKWARLCRGKASIPCWRIRVRITTIAA
SIO_010081: SGP1_RS01760
subclass of: SO_0000673
so part of: SGP1_RS01760
location: complement(349791..350318)
location: region:349791-350318:-1
so has part: feature:349791-350318:-1:exon

WP_011410048.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:349791-350318:-1:exon

SGP1_RS28970
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS28970
pseudo: true
so part of: sequence
location: complement(350794..>350961)
location: region:350794-350961:-1
so has part: feature:350794-350961:-1:exon
subclass of: SO_0000010

position:350794:-1
position: 350794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350961:-1
position: 350961
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350794-350961:-1:exon

SGP1_RS28970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS28970
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004261638.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: MFS transporter
SIO_010081: SGP1_RS28970
subclass of: SO_0000673
so part of: SGP1_RS28970
location: complement(350794..>350961)
location: region:350794-350961:-1
so has part: feature:350794-350961:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:350794-350961:-1:exon

SGP1_RS32420
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS32420
so part of: sequence
location: complement(350943..351293)
location: region:350943-351293:-1
so has part: feature:350943-351293:-1:exon
subclass of: SO_0000010

position:350943:-1
position: 350943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351293:-1
position: 351293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350943-351293:-1:exon

SGP1_RS32420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS32420
inference: COORDINATES: protein motif:HMM:NF019310.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTVPLGAQYAEKSIDRRHRYPHLTWPALVAPILRRPAGGGVITSYSSWRWIFFINIPLGIVAIIIAWLIIPNSRENHPQPFDKMGFVSIGLAMLCLVTALELCSQLPVIWWCPNSG
SIO_010081: SGP1_RS32420
subclass of: SO_0000673
so part of: SGP1_RS32420
location: complement(350943..351293)
location: region:350943-351293:-1
so has part: feature:350943-351293:-1:exon

WP_243466245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:350943-351293:-1:exon

SGP1_RS32425
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS32425
so part of: sequence
location: complement(351434..351703)
location: region:351434-351703:-1
so has part: feature:351434-351703:-1:exon
subclass of: SO_0000010

position:351434:-1
position: 351434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351703:-1
position: 351703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:351434-351703:-1:exon

SGP1_RS32425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS32425
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MARSKQVQAAQRDETTPKDDTSPQQRATGGISGMVLLVAGAFFMEYLDGTAIATALPQMARDFGVAAVDLNIGMSAYLITLAVLIPVSS
SIO_010081: SGP1_RS32425
subclass of: SO_0000673
so part of: SGP1_RS32425
location: complement(351434..351703)
location: region:351434-351703:-1
so has part: feature:351434-351703:-1:exon

WP_243466144.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:351434-351703:-1:exon

SGP1_RS26330
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS26330
pseudo: true
so part of: sequence
location: complement(352159..353739)
location: region:352159-353739:-1
so has part: feature:352159-353739:-1:exon
subclass of: SO_0000010

position:352159:-1
position: 352159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353739:-1
position: 353739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352159-353739:-1:exon

SGP1_RS26330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS26330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007886351.1
GO function: GO:0008658 - penicillin binding [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: penicillin-binding transpeptidase domain-containing protein
SIO_010081: SGP1_RS26330
subclass of: SO_0000673
so part of: SGP1_RS26330
location: complement(352159..353739)
location: region:352159-353739:-1
so has part: feature:352159-353739:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:352159-353739:-1:exon

SGP1_RS30525
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS30525
so part of: sequence
location: 354256..354396
location: region:354256-354396:1
so has part: feature:354256-354396:1:exon
subclass of: SO_0000010

position:354256:1
position: 354256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:354396:1
position: 354396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354256-354396:1:exon

SGP1_RS30525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS30525
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSHSPLRHLTVGRKLLIASSLTRMLMALLILAVLWGTITWSTMLL
SIO_010081: SGP1_RS30525
subclass of: SO_0000673
so part of: SGP1_RS30525
location: 354256..354396
location: region:354256-354396:1
so has part: feature:354256-354396:1:exon

WP_158302308.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:354256-354396:1:exon

SGP1_RS01780
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01780
old locus tag: SG0185
so part of: sequence
location: 354393..355100
location: region:354393-355100:1
so has part: feature:354393-355100:1:exon
subclass of: SO_0000010

position:354393:1
position: 354393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:355100:1
position: 355100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354393-355100:1:exon

SGP1_RS01780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01780
old locus tag: SG0185
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014888471.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MIMLRDLVTGYQGQGIGVPLDGRFDSGSMTAIVGANGSGKSTLLKTLAGLLPPVQGSLSFGPAGRPRIGYLPQQVEMDRQFPLTVFDVVAMGCWPASGLLRRINRAGQAAIWQALTRVGLETLAQCAISTLSGGQFQRMLFARLLVQEAPLILLDEPFSGIDKPTCGLLMTVIEQLHRQGRTIIVVLHDNQLVAQHFPQTLWLSSSQPAWGPSSRVLATWPDFAAPMPPLCLLSV
SIO_010081: SGP1_RS01780
subclass of: SO_0000673
so part of: SGP1_RS01780
location: 354393..355100
location: region:354393-355100:1
so has part: feature:354393-355100:1:exon

WP_041867326.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:354393-355100:1:exon

SGP1_RS01785
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01785
old locus tag: SG0186
so part of: sequence
location: 355103..355984
location: region:355103-355984:1
so has part: feature:355103-355984:1:exon
subclass of: SO_0000010

position:355103:1
position: 355103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:355984:1
position: 355984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355103-355984:1:exon

SGP1_RS01785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01785
old locus tag: SG0186
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014888472.1
GO component: GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
GO process: GO:0030001 - metal ion transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metal ABC transporter permease
translation: MLHVLFEPFVHYGFMRRALVACFALSLSTTPLGGFLLLRRMSLVGDALSHAILPGVAIGYLLSGMSLIAMGVGGFIAGLVVAVLSGWVSSMTQLKEDASFAGFYLGSLALGVTLVSLRGSSVDLLHLLFGSILAVDADAIRFVGAIASITFMSLALMYRALVIEAFDAAFLRVNPTGFPRLIQALFLALVVLNLVAGFQILGTLMSVGLMMLPPVAVRCWTTSLPKMLALATAIGMFCSWCGLLWSFYASLPAGPTIVLSASLVFFLSVLLGPRGGIALLLRRRGVVISKEKI
SIO_010081: SGP1_RS01785
subclass of: SO_0000673
so part of: SGP1_RS01785
location: 355103..355984
location: region:355103-355984:1
so has part: feature:355103-355984:1:exon

WP_083764638.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:355103-355984:1:exon

SGP1_RS01790
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01790
old locus tag: SG0187
so part of: sequence
location: 355981..356859
location: region:355981-356859:1
so has part: feature:355981-356859:1:exon
subclass of: SO_0000010

position:355981:1
position: 355981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356859:1
position: 356859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355981-356859:1:exon

SGP1_RS01790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01790
old locus tag: SG0187
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017891854.1
GO function: GO:0046872 - metal ion binding [Evidence IEA]
GO process: GO:0030001 - metal ion transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metal ABC transporter substrate-binding protein
translation: MKRFTLSFAMALIMVSPAALAKTVDAVASFSVLADIVRQVGGEHVKVTELVGPDGDPHAFEPAPKDSQSLVKADVVFVSGLGLEGWIDRLVTASGYRGKVLTASTGVNPRKMEEEGKTVTDPHAWNSARNGALYARNIMNALIAADPQDADYFRQHGEAYIQKLEKLDAWAKAEFAAIPQAKRKVLTSHDAFGYFGAEYGVQFLSPVGFSTEAESSASDVAGLIDQIKQENIATYFIENQTDPRLVKQIASASGAKPGGELYPEALSAADGPASTYEAAFRHNVTTLAGSMK
SIO_010081: SGP1_RS01790
subclass of: SO_0000673
so part of: SGP1_RS01790
location: 355981..356859
location: region:355981-356859:1
so has part: feature:355981-356859:1:exon

WP_011410051.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:355981-356859:1:exon

SGP1_RS23100
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS23100
so part of: sequence
location: complement(357103..357582)
location: region:357103-357582:-1
so has part: feature:357103-357582:-1:exon
subclass of: SO_0000010

position:357103:-1
position: 357103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357582:-1
position: 357582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357103-357582:-1:exon

SGP1_RS23100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS23100
inference: COORDINATES: protein motif:HMM:NF015831.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YadA C-terminal domain-containing protein
translation: MFATDPDTSVISVGQNLEGHTISITGTEGDRIISGVARDESDNDAANIAQLNQVNNTATSAKALAQKNSSRIKDIENKLSKTNTKIDRGLAASAALTGLFQPYGVGKINFTAGMGEYGSSQTITIGSSYRIDERTAFKAGVAYSGGNNVMYNASFNLEW
SIO_010081: SGP1_RS23100
subclass of: SO_0000673
so part of: SGP1_RS23100
location: complement(357103..357582)
location: region:357103-357582:-1
so has part: feature:357103-357582:-1:exon

WP_050747339.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:357103-357582:-1:exon

SGP1_RS01800
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01800
old locus tag: SG0188
so part of: sequence
location: complement(358960..359595)
location: region:358960-359595:-1
so has part: feature:358960-359595:-1:exon
subclass of: SO_0000010

position:358960:-1
position: 358960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359595:-1
position: 359595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358960-359595:-1:exon

SGP1_RS01800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01800
old locus tag: SG0188
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015378783.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1007 family protein
translation: MPGWGQRLLLLFGLLQPAAALAHPHSFIAMRSTFINQAQTLTGVHMRWTMDEMTSTDLLYDAGDTPAGSVIWKKLAAQVMANVLGQHYFSELYHQGKRVKFDNLPPEYHLSREGHKAVLDFVLPLAEPQPLTGQTFTLSTFDSSYFVDMTYKDASALALPPAMAQSCKVTLTTPNPDASWQEYARSLDKADAPPDKDLGRQFAQTVTLTCR
SIO_010081: SGP1_RS01800
subclass of: SO_0000673
so part of: SGP1_RS01800
location: complement(358960..359595)
location: region:358960-359595:-1
so has part: feature:358960-359595:-1:exon

WP_041867329.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:358960-359595:-1:exon

SGP1_RS01805
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01805
so part of: sequence
location: complement(359885..360178)
location: region:359885-360178:-1
so has part: feature:359885-360178:-1:exon
subclass of: SO_0000010

position:359885:-1
position: 359885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360178:-1
position: 360178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359885-360178:-1:exon

SGP1_RS01805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01805
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGGSLYIERSQLRQLPDNFSLDDHLVLENTPITALPRNMCVGGCLNILGTGIIHLPEDLYVGERLLLNAEKMTGNVTCVPPSCRQIRCSVPASASAT
SIO_010081: SGP1_RS01805
subclass of: SO_0000673
so part of: SGP1_RS01805
location: complement(359885..360178)
location: region:359885-360178:-1
so has part: feature:359885-360178:-1:exon

WP_041866540.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:359885-360178:-1:exon

SGP1_RS26335
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS26335
pseudo: true
so part of: sequence
location: complement(361119..362040)
location: region:361119-362040:-1
so has part: feature:361119-362040:-1:exon
subclass of: SO_0000010

position:361119:-1
position: 361119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362040:-1
position: 362040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361119-362040:-1:exon

SGP1_RS26335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS26335
inference: COORDINATES: similar to AA sequence:RefSeq:WP_032491235.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5 family transposase
SIO_010081: SGP1_RS26335
subclass of: SO_0000673
so part of: SGP1_RS26335
location: complement(361119..362040)
location: region:361119-362040:-1
so has part: feature:361119-362040:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:361119-362040:-1:exon

SGP1_RS01820
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01820
old locus tag: SG0189
so part of: sequence
location: 362157..362966
location: region:362157-362966:1
so has part: feature:362157-362966:1:exon
subclass of: SO_0000010

position:362157:1
position: 362157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362966:1
position: 362966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362157-362966:1:exon

SGP1_RS01820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01820
old locus tag: SG0189
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSIDRSPEKEENLSPRWRISIRRSVKATVYLAYIALSALGGWCFWREHLHGETFWLSCLLVAAVVAGIFYALSRIGVRCDTLYFSTQDCERVQRLRDEIERGQRYGLLVTHCAASCLDQDGQRLAAGILPPVGRYHSEILAGRRCTPERDHHGQITPSGWLAGRFTWLAQQLGPALGALPPAMSCYLAMRCDGGLTAEEEQQLLLQTGAVFNRQFSLLSAVGLLALDDWLDDTARAPSALVVITVQRAISPACALNDKGTGSRALSSRW
SIO_010081: SGP1_RS01820
subclass of: SO_0000673
so part of: SGP1_RS01820
location: 362157..362966
location: region:362157-362966:1
so has part: feature:362157-362966:1:exon

WP_011410053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:362157-362966:1:exon

SGP1_RS01825
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01825
so part of: sequence
location: 363104..363376
location: region:363104-363376:1
so has part: feature:363104-363376:1:exon
subclass of: SO_0000010

position:363104:1
position: 363104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363376:1
position: 363376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363104-363376:1:exon

SGP1_RS01825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01825
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRHAWLTGSGPVAAATEQALRLSPQTLIHHLDDVLGPTGIATPWLSLAAAAEQCQEDGAAQLIICHEAARRIWIGGVTPPWTIVCQPDEA
SIO_010081: SGP1_RS01825
subclass of: SO_0000673
so part of: SGP1_RS01825
location: 363104..363376
location: region:363104-363376:1
so has part: feature:363104-363376:1:exon

WP_148203336.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:363104-363376:1:exon

SGP1_RS30530
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS30530
so part of: sequence
location: 364089..364250
location: region:364089-364250:1
so has part: feature:364089-364250:1:exon
subclass of: SO_0000010

position:364089:1
position: 364089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364250:1
position: 364250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364089-364250:1:exon

SGP1_RS30530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS30530
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVILAIKALAFIKRNPVNKALLYRELEKPTIGMAAATISLHRLANKRPPFVFG
SIO_010081: SGP1_RS30530
subclass of: SO_0000673
so part of: SGP1_RS30530
location: 364089..364250
location: region:364089-364250:1
so has part: feature:364089-364250:1:exon

WP_158302309.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:364089-364250:1:exon

SGP1_RS01835
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01835
old locus tag: SG0190
so part of: sequence
location: 364247..365077
location: region:364247-365077:1
so has part: feature:364247-365077:1:exon
subclass of: SO_0000010

position:364247:1
position: 364247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365077:1
position: 365077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364247-365077:1:exon

SGP1_RS01835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01835
old locus tag: SG0190
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTQLILGDTWKRWIANNLIPEQGGRDLTVRRWREIMYDRLLDKVEYDGSPRRGEVNQLWQFVVLEHCPLLKHHDEATSALRVDSYSWHDLHAGTLFLHYASRHYAIQKDTNFAKDMGNIFYILCRVTGQYGYFFRLPSIVHAAFNTPRTQGESVKKRPHPLHDYFAARDAHLAAHDLVGAFQDAIGQWRTRRQLAQAILEKHYPHLSPDEHAEPLQRYLYPYANLTVRRSPDTPPVPHPSLQDFPPLMRRTGHGDGGPKLSGAGALVMCRGLACLV
SIO_010081: SGP1_RS01835
subclass of: SO_0000673
so part of: SGP1_RS01835
location: 364247..365077
location: region:364247-365077:1
so has part: feature:364247-365077:1:exon

WP_011410054.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:364247-365077:1:exon

SGP1_RS01840
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01840
old locus tag: SG0191
so part of: sequence
location: 365010..367382
location: region:365010-367382:1
so has part: feature:365010-367382:1:exon
subclass of: SO_0000010

position:365010:1
position: 365010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367382:1
position: 367382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365010-367382:1:exon

SGP1_RS01840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01840
old locus tag: SG0191
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVGQSYLAQARWLCAAGWHALSDDEQAFLRQATIHLVQLGFLLPSQHRPEGSRSEHVYRQKENVDIFTAVWADEERRYATVNAYDGYSVKRIDSIEDHLEELVEGVSQAQVEIRVSPVLQMKSQEQNLTAFFEAIAQRHQQMFTSRLGEYEKLTVPNTTLYQTLVSKMAFTTGVKDNPAALGTHVNFGCCLNRHLLVVVMANMAASAKNDAERSVIDAVITGIRSDLLLAKKGEDVLCIPLPHETNSGQPAAPRHRNTRALDVECRLNPDVESIYALSKAAVAHIVAIGYAASECLYDNGGTVAKLDDRPFLDLLPDAPVSDLVALSGQFKLTLPFQRICPHGVYVKTLPEMGVLYGPQFMLQQRQKTRIGLIEKIPGQLDVYFMFPSTLSGAKVMRLAHIALDLAGIATDDIPPLRRFVSLRSTMHLRYISEKKICAMLNRNLGIGQYFVASHDDLKQSQKATAAYPTSYLHLNKQRFTTKTDEARETVLALKQLFTEVDFLPHDPKKSLSQAPALPSTCSIYHYLLDALGLTPTQDKIIQFAARWLCYYTERIEEEFAATPLAEKVLFVSHKAYRAYNKNKPSLMGFTFRNDKNRQLFLLADSFDDDIPVLPRMHLLHEAKQRPASINYLHAPISTYNGQLNECVEIYEDREDIRDLNLVYYDSYMHFINRYRRALLNPGTAQDETDKAVRQRQNNAVREMSKAAFIKQVWRDDMLRVNVLLDNADMMAKVIEDVGRGMRYIPDGQTRSPGARLSQLPRKLYALIIASGRRHKPARRTPVFPGIAAVR
SIO_010081: SGP1_RS01840
subclass of: SO_0000673
so part of: SGP1_RS01840
location: 365010..367382
location: region:365010-367382:1
so has part: feature:365010-367382:1:exon

WP_011410055.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:365010-367382:1:exon

SGP1_RS01845
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01845
old locus tag: SG0192
so part of: sequence
location: complement(367475..367909)
location: region:367475-367909:-1
so has part: feature:367475-367909:-1:exon
subclass of: SO_0000010

position:367475:-1
position: 367475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367909:-1
position: 367909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367475-367909:-1:exon

SGP1_RS01845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01845
old locus tag: SG0192
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013811295.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YhbP family protein
translation: MDDQLEAICLFINKQHVLTLCAGNMDDLWCANCFYVFHPPAMALWLLTSTQTRHGELMRQNARVAGTIAPHPKTVVLIKGVQYRGVITCLEGEAERQARGHYYHRFPLAKAMPYPLWQLDLLEVKMTDNTLGFGKKLRWQRETS
SIO_010081: SGP1_RS01845
subclass of: SO_0000673
so part of: SGP1_RS01845
location: complement(367475..367909)
location: region:367475-367909:-1
so has part: feature:367475-367909:-1:exon

WP_011410056.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:367475-367909:-1:exon

SGP1_RS01850
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01850
pseudo: true
so part of: sequence
location: 368341..369304
location: region:368341-369304:1
so has part: feature:368341-369304:1:exon
subclass of: SO_0000010

position:368341:1
position: 368341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:369304:1
position: 369304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368341-369304:1:exon

SGP1_RS01850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01850
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006818718.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF1615 family protein
SIO_010081: SGP1_RS01850
subclass of: SO_0000673
so part of: SGP1_RS01850
location: 368341..369304
location: region:368341-369304:1
so has part: feature:368341-369304:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:368341-369304:1:exon

SGP1_RS01855
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01855
so part of: sequence
location: 369919..370353
location: region:369919-370353:1
so has part: feature:369919-370353:1:exon
subclass of: SO_0000010

position:369919:1
position: 369919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370353:1
position: 370353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369919-370353:1:exon

SGP1_RS01855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01855
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003850961.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YsnF/AvaK domain-containing protein
translation: MSNQLADNSPPSSQREGETSATTQSTLPLAQERLDVAKRQVVQGRVTITRRTTEREEAIKVWLKHENVEIHRVVKGTPLETHPAIREEGDIMIIPVVNEHVEVVRTLVLREEIHIRKVTTAVPYQESVTLRSQDITLEKQRDNE
SIO_010081: SGP1_RS01855
subclass of: SO_0000673
so part of: SGP1_RS01855
location: 369919..370353
location: region:369919-370353:1
so has part: feature:369919-370353:1:exon

WP_083764639.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:369919-370353:1:exon

SGP1_RS01860
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01860
old locus tag: SG0193
so part of: sequence
location: 370470..370892
location: region:370470-370892:1
so has part: feature:370470-370892:1:exon
subclass of: SO_0000010

position:370470:1
position: 370470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370892:1
position: 370892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:370470-370892:1:exon

SGP1_RS01860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01860
old locus tag: SG0193
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLITISALSPAEDLQSEGKAIRHPSLWQRLFGIDVDKENEQLYTQALDTGGVILTLCTKEGDVPQALTILDASGAAAGAGADYAGDTGYGRDVAGYSTSAAPLGVPQAGAAAPDYEDEALLPVSRGVVSMSRVMARRRMA
SIO_010081: SGP1_RS01860
subclass of: SO_0000673
so part of: SGP1_RS01860
location: 370470..370892
location: region:370470-370892:1
so has part: feature:370470-370892:1:exon

WP_041866545.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:370470-370892:1:exon

SGP1_RS26340
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS26340
so part of: sequence
location: 370933..371187
location: region:370933-371187:1
so has part: feature:370933-371187:1:exon
subclass of: SO_0000010

position:370933:1
position: 370933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371187:1
position: 371187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:370933-371187:1:exon

SGP1_RS26340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS26340
inference: COORDINATES: protein motif:HMM:NF021098.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2382 domain-containing protein
translation: MDEDVEAEVALHEQHANIFRRARDEAAYLDEVDWSDKTIEVTETREEPVIIKPPVSWRTSGAHRRFRSGCAVMTRYRQRMRIRC
SIO_010081: SGP1_RS26340
subclass of: SO_0000673
so part of: SGP1_RS26340
location: 370933..371187
location: region:370933-371187:1
so has part: feature:370933-371187:1:exon

WP_243466246.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:370933-371187:1:exon

SGP1_RS34880
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS34880
so part of: sequence
location: 371139..371261
location: region:371139-371261:1
so has part: feature:371139-371261:1:exon
subclass of: SO_0000010

position:371139:1
position: 371139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371261:1
position: 371261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371139-371261:1:exon

SGP1_RS34880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS34880
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRGDDPLSAEDEDPLLIDKDRLAGDERNGAIDPLRDLKRK
SIO_010081: SGP1_RS34880
subclass of: SO_0000673
so part of: SGP1_RS34880
location: 371139..371261
location: region:371139-371261:1
so has part: feature:371139-371261:1:exon

WP_279379476.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:371139-371261:1:exon

SGP1_RS26345
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS26345
pseudo: true
so part of: sequence
location: 371735..>372537
location: region:371735-372537:1
so has part: feature:371735-372537:1:exon
subclass of: SO_0000010

position:371735:1
position: 371735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372537:1
position: 372537
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371735-372537:1:exon

SGP1_RS26345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS26345
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005126705.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: aldehyde dehydrogenase family protein
SIO_010081: SGP1_RS26345
subclass of: SO_0000673
so part of: SGP1_RS26345
location: 371735..>372537
location: region:371735-372537:1
so has part: feature:371735-372537:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:371735-372537:1:exon

SGP1_RS32430
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS32430
so part of: sequence
location: 372754..373320
location: region:372754-373320:1
so has part: feature:372754-373320:1:exon
subclass of: SO_0000010

position:372754:1
position: 372754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373320:1
position: 373320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:372754-373320:1:exon

SGP1_RS32430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS32430
inference: COORDINATES: protein motif:HMM:NF013698.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MQILTPVGIDVASQKFDVAVWKGKAAYKSKAFSNTPKGFDALKKWLEPFGDCHICMEATGAYSEPLSTFLADAGYAVSVENPARIKSFGCSELSRNKTDKGDARMIARYCKLHAPVLWQPLPLNERKLKALVNRLINLQEMKQMEENRLETAPLVSTGFHLRGHRCAGYPNSRDKTGDGQSYRQRSKS
SIO_010081: SGP1_RS32430
subclass of: SO_0000673
so part of: SGP1_RS32430
location: 372754..373320
location: region:372754-373320:1
so has part: feature:372754-373320:1:exon

WP_243466145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:372754-373320:1:exon

SGP1_RS32435
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS32435
so part of: sequence
location: 373286..373717
location: region:373286-373717:1
so has part: feature:373286-373717:1:exon
subclass of: SO_0000010

position:373286:1
position: 373286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373717:1
position: 373717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373286-373717:1:exon

SGP1_RS32435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS32435
inference: COORDINATES: protein motif:HMM:NF014430.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MDNHIGNDPSLKQNREPLESIPGIAGVLSSMILGYFGDMSRFDSSKAVVAWAGLNPMLQESGLWKGKSRISKVGNAMIRKALYMPALTAMRYNPAIIALKEHMNARNKSGKVVVCAAMKKLLQQAYGVLKSGQVFDAGICLAR
SIO_010081: SGP1_RS32435
subclass of: SO_0000673
so part of: SGP1_RS32435
location: 373286..373717
location: region:373286-373717:1
so has part: feature:373286-373717:1:exon

WP_243466146.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:373286-373717:1:exon

SGP1_RS01875
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01875
pseudo: true
so part of: sequence
location: <373732..374085
location: region:373732-374085:1
so has part: feature:373732-374085:1:exon
subclass of: SO_0000010

position:373732:1
position: 373732
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:374085:1
position: 374085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373732-374085:1:exon

SGP1_RS01875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01875
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013357931.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: aldehyde dehydrogenase family protein
SIO_010081: SGP1_RS01875
subclass of: SO_0000673
so part of: SGP1_RS01875
location: <373732..374085
location: region:373732-374085:1
so has part: feature:373732-374085:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:373732-374085:1:exon

SGP1_RS32440
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS32440
so part of: sequence
location: complement(374141..374536)
location: region:374141-374536:-1
so has part: feature:374141-374536:-1:exon
subclass of: SO_0000010

position:374141:-1
position: 374141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374536:-1
position: 374536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374141-374536:-1:exon

SGP1_RS32440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS32440
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVSVLLTAIPWLCAIIAINLVGKISDRFRHMLDKALVLAMLVATLGTFLATLGNPWFAFVAMCIACIGSKTSATFFWPLPQGSLPVSIVAPGIALINSIGNLGGFFAPAVFGYLEQKTGSTTGGLYALTAV
SIO_010081: SGP1_RS32440
subclass of: SO_0000673
so part of: SGP1_RS32440
location: complement(374141..374536)
location: region:374141-374536:-1
so has part: feature:374141-374536:-1:exon

WP_070108725.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:374141-374536:-1:exon

SGP1_RS32445
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS32445
so part of: sequence
location: complement(374577..374720)
location: region:374577-374720:-1
so has part: feature:374577-374720:-1:exon
subclass of: SO_0000010

position:374577:-1
position: 374577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374720:-1
position: 374720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374577-374720:-1:exon

SGP1_RS32445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS32445
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLAEEEATRSRLQASTPSRMALLFYRQMLFYCVIFFTMTMTGYTLVF
SIO_010081: SGP1_RS32445
subclass of: SO_0000673
so part of: SGP1_RS32445
location: complement(374577..374720)
location: region:374577-374720:-1
so has part: feature:374577-374720:-1:exon

WP_243466147.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:374577-374720:-1:exon

SGP1_RS32450
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS32450
so part of: sequence
location: complement(374739..375170)
location: region:374739-375170:-1
so has part: feature:374739-375170:-1:exon
subclass of: SO_0000010

position:374739:-1
position: 374739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375170:-1
position: 375170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374739-375170:-1:exon

SGP1_RS32450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS32450
inference: COORDINATES: protein motif:HMM:NF019310.2
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MLIVNQIDRFNIGFIKAQLAADAGVSAAAFGLGAGLFFVGYALFEVPSNMFMARYGARIWLTRIIITWGLVVFCTGFITSPVQFYILRFLLGVAEAGFFPRILFYFRQWIPNAYRGRATAMIWRYCFIYSGVFTAAGPLAKRA
SIO_010081: SGP1_RS32450
subclass of: SO_0000673
so part of: SGP1_RS32450
location: complement(374739..375170)
location: region:374739-375170:-1
so has part: feature:374739-375170:-1:exon

WP_243466148.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:374739-375170:-1:exon

SGP1_RS01885
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS01885
old locus tag: SG0194
so part of: sequence
location: complement(375707..376198)
location: region:375707-376198:-1
so has part: feature:375707-376198:-1:exon
subclass of: SO_0000010

position:375707:-1
position: 375707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:376198:-1
position: 376198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375707-376198:-1:exon

SGP1_RS01885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS01885
old locus tag: SG0194
inference: COORDINATES: protein motif:HMM:NF018068.2
GO component: GO:0044384 - host outer membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Ail/Lom family outer membrane beta-barrel protein
translation: MKTPFSIIVFSLLLPVKALADNHNLSVGYQLSNMTNDTHGRRSNDDRLDGFNIKYRYEWGEPLGPIGSLSYMTANASSSWAVANKVQNDLRYSYSGFSLTAGPVWRFNDYVSVYGVIGINYDDYSSHFRKSTFKTGDAPATNYSRSELKKPHSPMAQAYKSTR
SIO_010081: SGP1_RS01885
subclass of: SO_0000673
so part of: SGP1_RS01885
location: complement(375707..376198)
location: region:375707-376198:-1
so has part: feature:375707-376198:-1:exon

WP_011410058.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:375707-376198:-1:exon

SGP1_RS01890
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: npr
locus tag: SGP1_RS01890
old locus tag: SG0195
so part of: sequence
location: complement(376547..376819)
location: region:376547-376819:-1
so has part: feature:376547-376819:-1:exon
subclass of: SO_0000010

position:376547:-1
position: 376547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:376819:-1
position: 376819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376547-376819:-1:exon

SGP1_RS01890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: npr
locus tag: SGP1_RS01890
old locus tag: SG0195
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000216792.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PTS phosphocarrier protein NPr
translation: MTVKQTVEIKNRLGMHARPAMKLFELVQSFDAEVMLRNDSGTEAEASSVIGLLMLDSAKGRMIEVEATGPDEVAALAAVIELFNAGFDED
SIO_010081: SGP1_RS01890
subclass of: SO_0000673
so part of: SGP1_RS01890
location: complement(376547..376819)
location: region:376547-376819:-1
so has part: feature:376547-376819:-1:exon

WP_011410059.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:376547-376819:-1:exon

SGP1_RS01895
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: rapZ
locus tag: SGP1_RS01895
old locus tag: SG0196
so part of: sequence
location: complement(376816..377670)
location: region:376816-377670:-1
so has part: feature:376816-377670:-1:exon
subclass of: SO_0000010

position:376816:-1
position: 376816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:377670:-1
position: 377670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376816-377670:-1:exon

SGP1_RS01895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: rapZ
locus tag: SGP1_RS01895
old locus tag: SG0196
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005229054.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNase adapter RapZ
translation: MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPQLASALAASNISAAVSIDVRNMPESPEIFEQAMDNLPQAFAPQLLFLDADRNTLIRRYSDTRRLHPLSALNLSLESAIDEEDSLLEPLRSRADLVIDTSEMSVHELAEMLRTRMLGKRERELTMVFESFGYKHGIPIDADYVFDVRFLPNPHWDPKLRPMTGLDRPVAAFLDRHTEVHNFIYQTRSYLELWLPMLETNNRSYLTVAVGCTGGKHRSVYIAEQLADYFRSRGKNAQSRHRTLEKSKS
SIO_010081: SGP1_RS01895
subclass of: SO_0000673
so part of: SGP1_RS01895
location: complement(376816..377670)
location: region:376816-377670:-1
so has part: feature:376816-377670:-1:exon

WP_011410060.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:376816-377670:-1:exon

SGP1_RS01900
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: ptsN
locus tag: SGP1_RS01900
old locus tag: SG0197
so part of: sequence
location: complement(377763..378242)
location: region:377763-378242:-1
so has part: feature:377763-378242:-1:exon
subclass of: SO_0000010

position:377763:-1
position: 377763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:378242:-1
position: 378242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377763-378242:-1:exon

SGP1_RS01900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: ptsN
locus tag: SGP1_RS01900
old locus tag: SG0197
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014888556.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PTS IIA-like nitrogen regulatory protein PtsN
translation: MTNDTAMQIDSVLNIECTRSDVHCQSKKRALEIISELAAKQLNLAPQVVFDAVLTRERMGSTGIGNGIAIPHGKLEEDTLRAVGVFIQLEQPIAFDAIDNQPVDLLFALLVPAEQCKVHLHTLSLVAKRLADKTVCRRLRAAQSDEELYQIMTETEDGD
SIO_010081: SGP1_RS01900
subclass of: SO_0000673
so part of: SGP1_RS01900
location: complement(377763..378242)
location: region:377763-378242:-1
so has part: feature:377763-378242:-1:exon

WP_011410061.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:377763-378242:-1:exon

SGP1_RS01905
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: hpf
locus tag: SGP1_RS01905
old locus tag: SG0198
so part of: sequence
location: complement(378348..378635)
location: region:378348-378635:-1
so has part: feature:378348-378635:-1:exon
subclass of: SO_0000010

position:378348:-1
position: 378348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:378635:-1
position: 378635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378348-378635:-1:exon

SGP1_RS01905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: hpf
locus tag: SGP1_RS01905
old locus tag: SG0198
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004125711.1
GO process: GO:0044238 - primary metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome hibernation promoting factor
translation: MQLNITGQHVDITDALREFVTTKFSKLEQFFDRINQVYIVLKVEKVQKIAEATVHLNGGELHATAEADDMYAAIDLLIDKLTRQLNKHKEKLKQY
SIO_010081: SGP1_RS01905
subclass of: SO_0000673
so part of: SGP1_RS01905
location: complement(378348..378635)
location: region:378348-378635:-1
so has part: feature:378348-378635:-1:exon

WP_011410062.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:378348-378635:-1:exon

SGP1_RS01910
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: rpoN
locus tag: SGP1_RS01910
old locus tag: SG0199
so part of: sequence
location: complement(378659..380092)
location: region:378659-380092:-1
so has part: feature:378659-380092:-1:exon
subclass of: SO_0000010

position:378659:-1
position: 378659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380092:-1
position: 380092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378659-380092:-1:exon

SGP1_RS01910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: rpoN
locus tag: SGP1_RS01910
old locus tag: SG0199
EC number: 2.7.7.6
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005229051.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0001216 - DNA-binding transcription activator activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO process: GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA polymerase factor sigma-54
translation: MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQEIQTALESNPFLEQADLHDEVDAHNAPDSESLDTREAMEQKDMPEELPLDATWDEMYSAGTPSGTGTDYRDEELPVYQGETTQTLQNYLMWQVELTPFSDTDRAIATSIVDAVDDTGYLTVPLDDILDSIGDENVTLDEVEAVLKRIQRFDPVGVAARDLRDCLMIQLSQFAADLPYLNEARLIVRDYLSLLSSHDFRTLLRSTKLKEDVLKPAIALIQSLDPRPGQSINTGESQYVIPDVLVRKLQNHWVVELNTDSIPALRINQQYAALGSNTRNDADGQFIRSHLQEARWLIKSLESRNETLLKVTHCIVERQMAFFEQGEEFMRPMVLADIAQAVDMHESTISRITMQKYLQSPRGIFELKYFFSSYVNTEGGGEASSTAIRALVKKLIAAENPAKPLSDSKLTDLLSEQGIMVARRTVAKYRESLSIPPSNQRKQLV
SIO_010081: SGP1_RS01910
subclass of: SO_0000673
so part of: SGP1_RS01910
location: complement(378659..380092)
location: region:378659-380092:-1
so has part: feature:378659-380092:-1:exon

WP_011410063.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:378659-380092:-1:exon

SGP1_RS01915
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: lptB
locus tag: SGP1_RS01915
old locus tag: SG0200
so part of: sequence
location: complement(380140..380865)
location: region:380140-380865:-1
so has part: feature:380140-380865:-1:exon
subclass of: SO_0000010

position:380140:-1
position: 380140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380865:-1
position: 380865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380140-380865:-1:exon

SGP1_RS01915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: lptB
locus tag: SGP1_RS01915
old locus tag: SG0200
EC number: 7.5.2.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003861862.1
GO component: GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LPS export ABC transporter ATP-binding protein
translation: MATLIAENLAKAYKERRVVEDVSLKVSSGEIVGLLGPNGAGKTTTFYMVVGIIPRDAGRIVIDDDDISLLPLHTRARRGIGYLPQEASIFRRLSVFDNLMAVLQIRQDLTREQRNDRAKELMEEFHISHLRNNLGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKKIIEHLRDSGLGVLITDHNVRETLDVCERAYIVSQGKLIAHGSPADVMLDEQVKRVYLGEEFRL
SIO_010081: SGP1_RS01915
subclass of: SO_0000673
so part of: SGP1_RS01915
location: complement(380140..380865)
location: region:380140-380865:-1
so has part: feature:380140-380865:-1:exon

WP_011410064.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:380140-380865:-1:exon

SGP1_RS01920
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: lptA
locus tag: SGP1_RS01920
old locus tag: SG0201
so part of: sequence
location: complement(380881..381423)
location: region:380881-381423:-1
so has part: feature:380881-381423:-1:exon
subclass of: SO_0000010

position:380881:-1
position: 380881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381423:-1
position: 381423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380881-381423:-1:exon

SGP1_RS01920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: lptA
locus tag: SGP1_RS01920
old locus tag: SG0201
EC number: 7.5.2.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014888553.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipopolysaccharide ABC transporter substrate-binding protein LptA
translation: MKSRIHNVRPSLLLAGGLMLASAQALALASDNQQPIHIDSAQQAVDMATNTVTFTGEVVVKRGSIDIRADKVVITRPDGKDGNEVVESYGNPVTFYQLQDDGKPVRGHSQKVRYETTNDLVILTGNAYLEQLDSNVKGDRITYLVKKQRMEVFSDKGKQVTTVLVPAQLQDKSGAKAPAK
SIO_010081: SGP1_RS01920
subclass of: SO_0000673
so part of: SGP1_RS01920
location: complement(380881..381423)
location: region:380881-381423:-1
so has part: feature:380881-381423:-1:exon

WP_041866547.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:380881-381423:-1:exon

SGP1_RS01925
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: lptC
locus tag: SGP1_RS01925
old locus tag: SG0202
so part of: sequence
location: complement(381392..381970)
location: region:381392-381970:-1
so has part: feature:381392-381970:-1:exon
subclass of: SO_0000010

position:381392:-1
position: 381392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381970:-1
position: 381970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381392-381970:-1:exon

SGP1_RS01925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: lptC
locus tag: SGP1_RS01925
old locus tag: SG0202
EC number: 7.5.2.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015369495.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LPS export ABC transporter periplasmic protein LptC
translation: MSKTTRWTTALLGLLVLVLIGWNLADTDTAPAQTPVNAGEPTYQSEYTTTVVYNPAGGLNYKLVADHVDHFADQHITWFTRPVATTFDESKVPTWTVKADKAKLTQDRMLYLYGHVQVDSLTDASQLKRITTDNAVVNLVTQDVSSDDEVTLYGTGFNSTGMKMRGNLRNKTAELIEKVKTSYEIQNSQRTP
SIO_010081: SGP1_RS01925
subclass of: SO_0000673
so part of: SGP1_RS01925
location: complement(381392..381970)
location: region:381392-381970:-1
so has part: feature:381392-381970:-1:exon

WP_011410066.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:381392-381970:-1:exon

SGP1_RS01930
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: kdsC
locus tag: SGP1_RS01930
old locus tag: SG0203
so part of: sequence
location: complement(381967..382530)
location: region:381967-382530:-1
so has part: feature:381967-382530:-1:exon
subclass of: SO_0000010

position:381967:-1
position: 381967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382530:-1
position: 382530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381967-382530:-1:exon

SGP1_RS01930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: kdsC
locus tag: SGP1_RS01930
old locus tag: SG0203
EC number: 3.1.3.45
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003851104.1
GO function: GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-deoxy-manno-octulosonate-8-phosphatase KdsC
translation: MQETPTVETCYGPVAQQVLESARTIRLLICDVDGVMSDGLIYMGNHGEELKTFNVRDGYGIRCLLTSGIEVAIITGRSARLLEDRCTTLGITHIYQGQSDKTLAFRALLSKLKLTAEQVAYVGDDLIDAPVMDQVGLSVAVADAHPLLRPRADYVTRIAGGRGAVREVCDLLLLAQGKLEDAKGQSL
SIO_010081: SGP1_RS01930
subclass of: SO_0000673
so part of: SGP1_RS01930
location: complement(381967..382530)
location: region:381967-382530:-1
so has part: feature:381967-382530:-1:exon

WP_011410067.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:381967-382530:-1:exon

SGP1_RS32455
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: kdsD
locus tag: SGP1_RS32455
old locus tag: SG0204
so part of: sequence
location: complement(382545..383531)
location: region:382545-383531:-1
so has part: feature:382545-383531:-1:exon
subclass of: SO_0000010

position:382545:-1
position: 382545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383531:-1
position: 383531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:382545-383531:-1:exon

SGP1_RS32455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: kdsD
locus tag: SGP1_RS32455
old locus tag: SG0204
EC number: 5.3.1.13
inference: COORDINATES: similar to AA sequence:RefSeq:NP_312103.1
GO function: GO:0097367 - carbohydrate derivative binding [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA]
GO process: GO:1901135 - carbohydrate derivative metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: arabinose-5-phosphate isomerase KdsD
translation: MSQNTLAPAFDFIAAGKEVLAIERAGLAQLDQYINDDFRRACEALFRCAGKVVVMGMGKSGHIGRKLAATFASTGTPAFFVHPGEASHGDLGMVSPQDIVIALSNSGESHEILALIPVLKRLHIPLICLTGKPESTMGKAAEIHLCVHVPEEACPLGLAPTASTTAALVMGDALAVALLRARGFTAEDFALSHPGGALGRKLLLRVSDIMHSGDEMPLTARTASLRDALLEITRKNLGMTVICDAQNVIVGIFTDGDLRRVFDMGIDLKEARIADVMTPGGVRVAPDTLAVEALNLIQARNITSLMVAQDDHLLGVVHMHDMLRAGVI
SIO_010081: SGP1_RS32455
subclass of: SO_0000673
so part of: SGP1_RS32455
location: complement(382545..383531)
location: region:382545-383531:-1
so has part: feature:382545-383531:-1:exon

WP_011410068.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:382545-383531:-1:exon

SGP1_RS32460
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS32460
pseudo: true
so part of: sequence
location: complement(<383589..384407)
location: region:383589-384407:-1
so has part: feature:383589-384407:-1:exon
subclass of: SO_0000010

position:383589:-1
position: 383589
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:384407:-1
position: 384407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383589-384407:-1:exon

SGP1_RS32460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS32460
inference: COORDINATES: protein motif:HMM:TIGR00367.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0098662 - inorganic cation transmembrane transport [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: calcium/sodium antiporter
SIO_010081: SGP1_RS32460
subclass of: SO_0000673
so part of: SGP1_RS32460
location: complement(<383589..384407)
location: region:383589-384407:-1
so has part: feature:383589-384407:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:383589-384407:-1:exon

SGP1_RS01940
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: mlaF
locus tag: SGP1_RS01940
old locus tag: SG0205
so part of: sequence
location: 384656..385465
location: region:384656-385465:1
so has part: feature:384656-385465:1:exon
subclass of: SO_0000010

position:384656:1
position: 384656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385465:1
position: 385465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:384656-385465:1:exon

SGP1_RS01940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: mlaF
locus tag: SGP1_RS01940
old locus tag: SG0205
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013316013.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phospholipid ABC transporter ATP-binding protein MlaF
translation: MNQSDNLVEIRGLSFRRGDRVIFDNISMQFPRGKVTAIIGPSGIGKTTLLRLIGGQLPPDSGEIWVDGDNIPTLSRRRLYEVRKKISMLFQSGALFTDNTVFENVAFPLRRHTRLPEPVLRSTVLMKLEAVGLRGAASLMPAELSGGMARRAALARAIALDPELIMFDEPFVGQDPITMGVLVKLIDELNHALGVTCIVVSHDVPEVLSITDYAYIVAEQHVVAEGTPASLRDNQDPRVRQFLDGIADGPVPFNVPADDYQTQLLGAGS
SIO_010081: SGP1_RS01940
subclass of: SO_0000673
so part of: SGP1_RS01940
location: 384656..385465
location: region:384656-385465:1
so has part: feature:384656-385465:1:exon

WP_011410069.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:384656-385465:1:exon

SGP1_RS01945
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: mlaE
locus tag: SGP1_RS01945
old locus tag: SG0206
so part of: sequence
location: 385474..386256
location: region:385474-386256:1
so has part: feature:385474-386256:1:exon
subclass of: SO_0000010

position:385474:1
position: 385474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:386256:1
position: 386256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:385474-386256:1:exon

SGP1_RS01945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: mlaE
locus tag: SGP1_RS01945
old locus tag: SG0206
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013650484.1
GO component: GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipid asymmetry maintenance ABC transporter permease subunit MlaE
translation: MVREAIASFGRRGINICHGFGRAGVMLFNALIGKPALREQWPLLVKKLYGVGVLSLVIIMVSGLFIGMVLGLQGYIILTTYSAESSLGMLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLTAIFVAVGIWGGAVVGVEWKGIDSGFFWSAMQGAVDWRQDLVNCVIKSVVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHASLAVLGLDFVLTALMFGN
SIO_010081: SGP1_RS01945
subclass of: SO_0000673
so part of: SGP1_RS01945
location: 385474..386256
location: region:385474-386256:1
so has part: feature:385474-386256:1:exon

WP_011410070.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:385474-386256:1:exon

SGP1_RS01950
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: mlaD
locus tag: SGP1_RS01950
old locus tag: SG0207
so part of: sequence
location: 386261..386788
location: region:386261-386788:1
so has part: feature:386261-386788:1:exon
subclass of: SO_0000010

position:386261:1
position: 386261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:386788:1
position: 386788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:386261-386788:1:exon

SGP1_RS01950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: mlaD
locus tag: SGP1_RS01950
old locus tag: SG0207
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005174245.1
GO process: GO:0015914 - phospholipid transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane lipid asymmetry maintenance protein MlaD
translation: MQTKKSEIWVGAFMIIALCAIVFLCLKVADIRSVSNAATYRISASFDNIGGLKVRSPVRVGGVVIGRVADITLDPKTYTPKVTIDIEQTYNHIPDTSSLAIRTSGLLGEQYLALNIGFDDPEMGTSILKDGGVIQDTKSAIVLEDLIGQFLYKSGSGGNGTGAGQSRGNGGAAGQ
SIO_010081: SGP1_RS01950
subclass of: SO_0000673
so part of: SGP1_RS01950
location: 386261..386788
location: region:386261-386788:1
so has part: feature:386261-386788:1:exon

WP_011410071.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:386261-386788:1:exon

SGP1_RS01955
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: mlaC
locus tag: SGP1_RS01955
old locus tag: SG0208
so part of: sequence
location: 386926..387561
location: region:386926-387561:1
so has part: feature:386926-387561:1:exon
subclass of: SO_0000010

position:386926:1
position: 386926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387561:1
position: 387561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:386926-387561:1:exon

SGP1_RS01955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: mlaC
locus tag: SGP1_RS01955
old locus tag: SG0208
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012883044.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phospholipid-binding protein MlaC
translation: MLKRLFMVALLAIAPLTQAADQSNPYRLMNDAASKTFTRLKNEQGKIHQDPNYLHTVVREELLPYVQVKYAGALVLGRYYREATPAQRAAYFKAFQDYLEQAYGQALALYSNQTYQIAPEKPLGDATIVAIRVTIIDQGGRPPVRLDFQWRKNSVSGNWQAYDMIAEGVSMITTKQNEWASTLRTKGIDGLTQQLQAAARTPITLDKQRNG
SIO_010081: SGP1_RS01955
subclass of: SO_0000673
so part of: SGP1_RS01955
location: 386926..387561
location: region:386926-387561:1
so has part: feature:386926-387561:1:exon

WP_011410072.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:386926-387561:1:exon

SGP1_RS01960
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: mlaB
locus tag: SGP1_RS01960
old locus tag: SG0209
so part of: sequence
location: 387554..387862
location: region:387554-387862:1
so has part: feature:387554-387862:1:exon
subclass of: SO_0000010

position:387554:1
position: 387554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387862:1
position: 387862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:387554-387862:1:exon

SGP1_RS01960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: mlaB
locus tag: SGP1_RS01960
old locus tag: SG0209
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002210125.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipid asymmetry maintenance protein MlaB
translation: MAEELSWHTQGQTLILHGELDRDTLLTLWQQRQPLLEGIRFLDVSNLRRVDSAGVALMLHFYHYQQQRGATLALTGVTDRLRTLIALYKLQAILPCTTTADA
SIO_010081: SGP1_RS01960
subclass of: SO_0000673
so part of: SGP1_RS01960
location: 387554..387862
location: region:387554-387862:1
so has part: feature:387554-387862:1:exon

WP_011410073.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:387554-387862:1:exon

SGP1_RS01965
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: ibaG
locus tag: SGP1_RS01965
old locus tag: SG0210
so part of: sequence
location: 388157..388411
location: region:388157-388411:1
so has part: feature:388157-388411:1:exon
subclass of: SO_0000010

position:388157:1
position: 388157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388411:1
position: 388411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:388157-388411:1:exon

SGP1_RS01965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: ibaG
locus tag: SGP1_RS01965
old locus tag: SG0210
inference: COORDINATES: similar to AA sequence:RefSeq:NP_417657.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BolA family iron metabolism protein IbaG
translation: METSEIKAVLMKALALDEAHVRGDGSHFQVIAVSEQFAGMSRVKKQQTIYAPLMEYISDNRIHALSIKAYTPDEWQRDRKLNGF
SIO_010081: SGP1_RS01965
subclass of: SO_0000673
so part of: SGP1_RS01965
location: 388157..388411
location: region:388157-388411:1
so has part: feature:388157-388411:1:exon

WP_011410074.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:388157-388411:1:exon

SGP1_RS01970
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: murA
locus tag: SGP1_RS01970
old locus tag: SG0211
so part of: sequence
location: 388465..389724
location: region:388465-389724:1
so has part: feature:388465-389724:1:exon
subclass of: SO_0000010

position:388465:1
position: 388465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389724:1
position: 389724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:388465-389724:1:exon

SGP1_RS01970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: murA
locus tag: SGP1_RS01970
old locus tag: SG0211
EC number: 2.5.1.7
inference: COORDINATES: similar to AA sequence:RefSeq:NP_312095.1
GO function: GO:0008760 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylglucosamine 1-carboxyvinyltransferase
translation: MDKFCVQGPTRLSGEVTISGAKNAALPILFAALLAEEPVEIQNVPKLKDIDTTMKLLGQLGARVERNGSVHVDASDVDVYCAPYELVKTMRASIWALGPLVARFGQGQVSLPGGCAIGARPVDLHISGLEQLGATIKLEEGYVKASVDGRLRGAHIVMDKVSVGATITIMSAATLATGTTIIENAAREPEIVDTANFLITLGAKISGAGTDKITIEGVERLGGGVYRVLPDRIETGTFLVAAAISRGRVVCHATRPDTLDAVLAKLREAGADIAVGDDWISLDMHGQRPKAVTVRTAPHPGFPTDMQAQFSLLNLVADGTGVITETIFENRFMHVPELIRMGAHAEIESNTVICHGVETLSGAQVMATDLRASASLVLAGCIAEGVTVVDRIYHIDRGYDCIEEKLRRMGANIERIRGE
SIO_010081: SGP1_RS01970
subclass of: SO_0000673
so part of: SGP1_RS01970
location: 388465..389724
location: region:388465-389724:1
so has part: feature:388465-389724:1:exon

WP_011410075.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:388465-389724:1:exon

SGP1_RS01975
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: degS
locus tag: SGP1_RS01975
old locus tag: SG0212
so part of: sequence
location: complement(389816..390880)
location: region:389816-390880:-1
so has part: feature:389816-390880:-1:exon
subclass of: SO_0000010

position:389816:-1
position: 389816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:390880:-1
position: 390880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:389816-390880:-1:exon

SGP1_RS01975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: degS
locus tag: SGP1_RS01975
old locus tag: SG0212
EC number: 3.4.21.107
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001747123.1
GO function: GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane-stress sensor serine endopeptidase DegS
translation: MLLKLLRAVIIGFIVAALLLVLVPTLRSTTGQLLHPADNSDSEQPVSYNQGVRRAAPAVVYVYNRSMNSSAHNQLEIRTLGSGVIMNQKGYLLTNKHVINDAEQIIVALQDGRVYEALLVGSDSLTDLAVLKIDASNLPVIPINPNRQPHIGDVVMAIGNPYNLGQTITQGIISATGRIGLSPSGRQNFLQTDASINHGNSGGALINTLGELVGINTLSFDKSNNGETPEGIGFAIPTELATKVMNKLICDGRVIRGYIGIGGREVAPMHNGGGLDRIQGIIVNEVTPGGPAAQAGIQVENVILSVNHKPAISAIETMDQVAEIRPGSRIPVEILRNGKKLTVEVTIQEYPASN
SIO_010081: SGP1_RS01975
subclass of: SO_0000673
so part of: SGP1_RS01975
location: complement(389816..390880)
location: region:389816-390880:-1
so has part: feature:389816-390880:-1:exon

WP_011410076.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:389816-390880:-1:exon

SGP1_RS01980
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: degQ
locus tag: SGP1_RS01980
old locus tag: SG0213
so part of: sequence
location: complement(390966..392336)
location: region:390966-392336:-1
so has part: feature:390966-392336:-1:exon
subclass of: SO_0000010

position:390966:-1
position: 390966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:392336:-1
position: 392336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:390966-392336:-1:exon

SGP1_RS01980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: degQ
locus tag: SGP1_RS01980
old locus tag: SG0213
EC number: 3.4.21.107
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410077.1
GO function: GO:0005515 - protein binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: serine endoprotease DegQ
translation: MKTTPLFSALALSIGLSLIPFSAPQAALPAEVAGQSMPSLAPMLTKVLPAVVSVHVEGSQPVRRPALPKEFKYFFGPDTPGGNGGSRPFEGLGSGVIINAAKGYVITNNHVVNGADKIKVQLNDGREFDAKLVGHDEQTDLALLQLPAPKNLSEVTMADSDTLKVGDFAVAVGNPFGLGQTATSGIVSALGRSGLNLEGLENFIQTDASINRGNSGGALVNLNGELIGINTAILAPGGGNIGIGFAIPSNIVKNLSQQLIEYGEVKRGQLGIKGTELTADIAKAFNIDAQSGAFVSEVLPNSAAAKAGIKAGDIIVSVEGKPIQSFAELRVKVGTTAPGKTVKLGLLRNGKVQTASVVLDDNASATTSEEILTQALQGASLSNGQLKNGTKGVQVEEVVKDSPAAAIGLQKGDVIVGLNRERVQSVAQLRKVLEAKPAVMALNIVRGDADIYLLLR
SIO_010081: SGP1_RS01980
subclass of: SO_0000673
so part of: SGP1_RS01980
location: complement(390966..392336)
location: region:390966-392336:-1
so has part: feature:390966-392336:-1:exon

WP_011410077.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:390966-392336:-1:exon

SGP1_RS01985
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: zapG
locus tag: SGP1_RS01985
old locus tag: SG0214
so part of: sequence
location: complement(392483..392866)
location: region:392483-392866:-1
so has part: feature:392483-392866:-1:exon
subclass of: SO_0000010

position:392483:-1
position: 392483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:392866:-1
position: 392866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392483-392866:-1:exon

SGP1_RS01985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: zapG
locus tag: SGP1_RS01985
old locus tag: SG0214
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012147047.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Z-ring associated protein ZapG
translation: MAWEYALIGLVVGMIIGAVAMRFGNRKLCQQQTLKHELEKSKAELDKYREELTSHFARSAELLDNMANDYRQLYQHMAKSSNSLLPNQRSEDNPFRYRLTEAEADNDQIPAEMQPRDYPESASGLRK
SIO_010081: SGP1_RS01985
subclass of: SO_0000673
so part of: SGP1_RS01985
location: complement(392483..392866)
location: region:392483-392866:-1
so has part: feature:392483-392866:-1:exon

WP_011410078.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:392483-392866:-1:exon

SGP1_RS01990
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: zapE
locus tag: SGP1_RS01990
old locus tag: SG0215
so part of: sequence
location: 393078..394211
location: region:393078-394211:1
so has part: feature:393078-394211:1:exon
subclass of: SO_0000010

position:393078:1
position: 393078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394211:1
position: 394211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:393078-394211:1:exon

SGP1_RS01990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: zapE
locus tag: SGP1_RS01990
old locus tag: SG0215
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002220218.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO process: GO:0051301 - cell division [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cell division protein ZapE
translation: MQATSPLSLYQQMLAQGEYQPDDVQAAAIARLDQIHQQLSAAQTAASAPSGLLGRLGKKWLGKSERATDEPVPGLYMWGGVGRGKTWLMDLFYRSLPGERKLRLHFHRFMLRVHEEMTRLQGHQDPLEIIADGFKAETDVLCFDEFFVTDITDAMLLGTLMQALFARGITLVATSNIPPDDLYRNGLQRARFLPAIELIKLHCAVMNVDAGIDYRLRTLTQANLWLHLGNETDRAMAQMFSALAGRHLALDGDAPALEINHRPLPTLGVTDGVVALDFAELCGGARSQNDYIVLSEHFHSVLLHNVQPMGGDQENTARRFLALVDEFYERHVKLVVGASVPMSALYQGQLLRFEYQRCLSRLQEMQSEEYLRLAHQP
SIO_010081: SGP1_RS01990
subclass of: SO_0000673
so part of: SGP1_RS01990
location: 393078..394211
location: region:393078-394211:1
so has part: feature:393078-394211:1:exon

WP_011410079.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:393078-394211:1:exon

SGP1_RS01995
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: rplM
locus tag: SGP1_RS01995
old locus tag: SG0216
so part of: sequence
location: 394425..394853
location: region:394425-394853:1
so has part: feature:394425-394853:1:exon
subclass of: SO_0000010

position:394425:1
position: 394425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394853:1
position: 394853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:394425-394853:1:exon

SGP1_RS01995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: rplM
locus tag: SGP1_RS01995
old locus tag: SG0216
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L13
translation: MKTFTAKPETVKRDWYVVDAEGKTLGRLATELARRLRGKHKAEYTPHVDTGDYLIVLNADKVAVTGNKRNDKIYYHYTGHVGGIKQATFEEMIARRPERVIEIAVKGMLPKGPLGRAMFRKLKVYAGTEHNHAAQQPQVLDI
SIO_010081: SGP1_RS01995
subclass of: SO_0000673
so part of: SGP1_RS01995
location: 394425..394853
location: region:394425-394853:1
so has part: feature:394425-394853:1:exon

WP_011410080.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:394425-394853:1:exon

SGP1_RS02000
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: rpsI
locus tag: SGP1_RS02000
old locus tag: SG0217
so part of: sequence
location: 394869..395261
location: region:394869-395261:1
so has part: feature:394869-395261:1:exon
subclass of: SO_0000010

position:394869:1
position: 394869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:395261:1
position: 395261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:394869-395261:1:exon

SGP1_RS02000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: rpsI
locus tag: SGP1_RS02000
old locus tag: SG0217
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S9
translation: MAENQYYGTGRRKSSSARVFVKAGSGNIVINQRSLDQYFGRETARMVVRQPLELVDMVGKLDLYITVKGGGISGQAGAIRHGITRALMEYDETLRADLRKAGFVTRDARQVERKKVGLRKARRRPQFSKR
SIO_010081: SGP1_RS02000
subclass of: SO_0000673
so part of: SGP1_RS02000
location: 394869..395261
location: region:394869-395261:1
so has part: feature:394869-395261:1:exon

WP_011410081.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:394869-395261:1:exon

SGP1_RS02005
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: sspA
locus tag: SGP1_RS02005
old locus tag: SG0218
so part of: sequence
location: 395587..396228
location: region:395587-396228:1
so has part: feature:395587-396228:1:exon
subclass of: SO_0000010

position:395587:1
position: 395587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:396228:1
position: 396228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395587-396228:1:exon

SGP1_RS02005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: sspA
locus tag: SGP1_RS02005
old locus tag: SG0218
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005162411.1
GO function: GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0006749 - glutathione metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: stringent starvation protein SspA
translation: MAVAANKRSVMTLFSGTTDIFSHQVRIVLAEKGVSVEIEQVEMDNLPQDLIDLNPYCTVPTLVDRELTLYESRIIMEYLDERFPHPPLMPVYPVARGTSRLMMHRIENDWYTLMRKIEQSSGSEADNARRQLREELLAVAPVFNEAPFFMSEEFSLVDCYLAPLLWRLPQLGIELAGVCAKELKGYMTRVFERDSFLASLTEAEREMRLQTRG
SIO_010081: SGP1_RS02005
subclass of: SO_0000673
so part of: SGP1_RS02005
location: 395587..396228
location: region:395587-396228:1
so has part: feature:395587-396228:1:exon

WP_011410082.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:395587-396228:1:exon

SGP1_RS02010
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: sspB
locus tag: SGP1_RS02010
old locus tag: SG0219
so part of: sequence
location: 396233..396733
location: region:396233-396733:1
so has part: feature:396233-396733:1:exon
subclass of: SO_0000010

position:396233:1
position: 396233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:396733:1
position: 396733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:396233-396733:1:exon

SGP1_RS02010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: sspB
locus tag: SGP1_RS02010
old locus tag: SG0219
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005229067.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ClpXP protease specificity-enhancing factor
translation: MKVTQLSPRRPYLLQAFYEWLLDNQLTPHLVVDVTVDGVMVPMEFACDGQIVLNIAPRAVANLTLDNDDVQFNARFGGVPQQVVVPMAAVLAIYARENGAGTMFEPEVAYEQLTLADDDSAEEPATETVMSVIDVDWPDNAQADDPEDKPPSPPRGGGRPSLRVVK
SIO_010081: SGP1_RS02010
subclass of: SO_0000673
so part of: SGP1_RS02010
location: 396233..396733
location: region:396233-396733:1
so has part: feature:396233-396733:1:exon

WP_011410083.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:396233-396733:1:exon

SGP1_RS02015
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02015
pseudo: true
so part of: sequence
location: complement(396787..398187)
location: region:396787-398187:-1
so has part: feature:396787-398187:-1:exon
subclass of: SO_0000010

position:396787:-1
position: 396787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:398187:-1
position: 398187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:396787-398187:-1:exon

SGP1_RS02015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02015
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: FAD-dependent oxidoreductase
SIO_010081: SGP1_RS02015
subclass of: SO_0000673
so part of: SGP1_RS02015
location: complement(396787..398187)
location: region:396787-398187:-1
so has part: feature:396787-398187:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:396787-398187:-1:exon

SGP1_RS32465
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS32465
pseudo: true
so part of: sequence
location: complement(398198..398764)
location: region:398198-398764:-1
so has part: feature:398198-398764:-1:exon
subclass of: SO_0000010

position:398198:-1
position: 398198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:398764:-1
position: 398764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:398198-398764:-1:exon

SGP1_RS32465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS32465
inference: COORDINATES: protein motif:HMM:NF013784.2
GO function: GO:0015930 - glutamate synthase activity [Evidence IEA]; GO:0016638 - oxidoreductase activity, acting on the CH-NH2 group of donors [Evidence IEA]
GO process: GO:0006537 - glutamate biosynthetic process [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: glutamate synthase-related protein
SIO_010081: SGP1_RS32465
subclass of: SO_0000673
so part of: SGP1_RS32465
location: complement(398198..398764)
location: region:398198-398764:-1
so has part: feature:398198-398764:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:398198-398764:-1:exon

SGP1_RS32470
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS32470
pseudo: true
so part of: sequence
location: complement(398835..399600)
location: region:398835-399600:-1
so has part: feature:398835-399600:-1:exon
subclass of: SO_0000010

position:398835:-1
position: 398835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:399600:-1
position: 399600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:398835-399600:-1:exon

SGP1_RS32470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS32470
inference: COORDINATES: protein motif:HMM:NF016768.2
GO function: GO:0015930 - glutamate synthase activity [Evidence IEA]
GO process: GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: glutamate synthase central domain-containing protein
SIO_010081: SGP1_RS32470
subclass of: SO_0000673
so part of: SGP1_RS32470
location: complement(398835..399600)
location: region:398835-399600:-1
so has part: feature:398835-399600:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:398835-399600:-1:exon

SGP1_RS34885
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS34885
so part of: sequence
location: complement(399672..399944)
location: region:399672-399944:-1
so has part: feature:399672-399944:-1:exon
subclass of: SO_0000010

position:399672:-1
position: 399672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:399944:-1
position: 399944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399672-399944:-1:exon

SGP1_RS34885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS34885
inference: COORDINATES: protein motif:HMM:NF016768.2
GO function: GO:0015930 - glutamate synthase activity [Evidence IEA]
GO process: GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamate synthase central domain-containing protein
translation: MLGENGQEATGSIGDDTPFAVLSSRPRVIYDYFLQQFAQVTNPPIDSLREAHVMSLATCIGREMNVFSEAEGQAYRLAFKSPILLYSDFT
SIO_010081: SGP1_RS34885
subclass of: SO_0000673
so part of: SGP1_RS34885
location: complement(399672..399944)
location: region:399672-399944:-1
so has part: feature:399672-399944:-1:exon

WP_279379430.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:399672-399944:-1:exon

SGP1_RS32475
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS32475
pseudo: true
so part of: sequence
location: complement(399966..400965)
location: region:399966-400965:-1
so has part: feature:399966-400965:-1:exon
subclass of: SO_0000010

position:399966:-1
position: 399966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:400965:-1
position: 400965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399966-400965:-1:exon

SGP1_RS32475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS32475
inference: COORDINATES: protein motif:HMM:NF012531.2
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: SGP1_RS32475
subclass of: SO_0000673
so part of: SGP1_RS32475
location: complement(399966..400965)
location: region:399966-400965:-1
so has part: feature:399966-400965:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:399966-400965:-1:exon

SGP1_RS34890
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS34890
so part of: sequence
location: complement(400965..401123)
location: region:400965-401123:-1
so has part: feature:400965-401123:-1:exon
subclass of: SO_0000010

position:401123:-1
position: 401123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400965-401123:-1:exon

SGP1_RS34890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS34890
inference: COORDINATES: protein motif:HMM:NF012531.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRWPAWQHRGAILADGKTGDGCGLLLQKPDRFYRMVAQERGWGGWRKITPLA
SIO_010081: SGP1_RS34890
subclass of: SO_0000673
so part of: SGP1_RS34890
location: complement(400965..401123)
location: region:400965-401123:-1
so has part: feature:400965-401123:-1:exon

WP_279379431.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:400965-401123:-1:exon

SGP1_RS02030
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02030
pseudo: true
so part of: sequence
location: 401938..>402556
location: region:401938-402556:1
so has part: feature:401938-402556:1:exon
subclass of: SO_0000010

position:401938:1
position: 401938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402556:1
position: 402556
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401938-402556:1:exon

SGP1_RS02030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015959060.1
GO function: GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
note: This family includes YhcC from E. coli K-12, an uncharacterized radical SAM protein.; frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: TIGR01212 family radical SAM protein
SIO_010081: SGP1_RS02030
subclass of: SO_0000673
so part of: SGP1_RS02030
location: 401938..>402556
location: region:401938-402556:1
so has part: feature:401938-402556:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:401938-402556:1:exon

SGP1_RS02035
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: arcB
locus tag: SGP1_RS02035
old locus tag: SG0220
so part of: sequence
location: 402889..405315
location: region:402889-405315:1
so has part: feature:402889-405315:1:exon
subclass of: SO_0000010

position:402889:1
position: 402889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405315:1
position: 405315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402889-405315:1:exon

SGP1_RS02035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: arcB
locus tag: SGP1_RS02035
old locus tag: SG0220
EC number: 2.7.13.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004948470.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0016310 - phosphorylation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aerobic respiration two-component sensor histidine kinase ArcB
translation: MKQIRLLAQYYVDLMVKLGLVRFSLLLASALVVLAMIVQMVVTMVLRGEVKSIDVVRSIFFGLLITPWAVYFLSVVVEQLEASRQRLSRLVDKLEEMRNRDLQLNAQLQNNIAQLNQEMADREKAEEARRRAMEKLTEEMARREQAQIELEQQSSLLRSFLDASPDLVYYRNENKEFSGCNRATELLTGKSEKQLVGLTPRDVYSPEIAEKVIETDEKVFRHNVSLTYEQWLEYPDGRKACFELRKVPFYDRIGKRHGLMGFCRDITERKRYQDALESASREKTTFISTISHELRTPLNGIVGLSRILLDTQLTEEQHNYLKTIHVSAVTLGYIFNDIIEMDKLERRKVRLDNQPLDFTDFLMDLKNLSGLLVQPKGLKLVMAPRQPLPRSIIADGTRLRQILWNLIGNAVKFTRQGEIVIRIWREQADHLCFDVQDSGIGIPDEEQEKIFAMYYQVKGQHGGKPATGTGIGLAVSKRLAQAMDGDITVKSHPGQGSCFTLTIVAPEVAQVQAHTEDEEEMPLPALNVLLVEDIELNVLVACSVLEKLGSSVEVAMTGKDALAMFDPDEFDLVLLDIQLPDMTGLDIASQLKRRYQGRQMPPLIALTANVLKDKREYLAAGMDDVLSKPLEVAALIQVIKTFWDPADSAGVEAPAVQSAVDKSRQVLDTTMLEQYMELVGPSLIHQSLAMFEKMMPGYLAILDSNMTARDQQGIAEEGHKIKGAAGSVGLRHLQQLAQQIQSPELPAWWDNVQEWIDELKQEWRDNVQTLRDWVQQAEKNDPDLCCRGARRLRQHQGNCISSSLLNGG
SIO_010081: SGP1_RS02035
subclass of: SO_0000673
so part of: SGP1_RS02035
location: 402889..405315
location: region:402889-405315:1
so has part: feature:402889-405315:1:exon

WP_011410084.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:402889-405315:1:exon

SGP1_RS02040
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: elbB
locus tag: SGP1_RS02040
old locus tag: SG0221
pseudo: true
so part of: sequence
location: 405464..406119
location: region:405464-406119:1
so has part: feature:405464-406119:1:exon
subclass of: SO_0000010

position:405464:1
position: 405464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406119:1
position: 406119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405464-406119:1:exon

SGP1_RS02040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: elbB
locus tag: SGP1_RS02040
old locus tag: SG0221
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009114724.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: isoprenoid biosynthesis glyoxalase ElbB
SIO_010081: SGP1_RS02040
subclass of: SO_0000673
so part of: SGP1_RS02040
location: 405464..406119
location: region:405464-406119:1
so has part: feature:405464-406119:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:405464-406119:1:exon

SGP1_RS02045
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: mtgA
locus tag: SGP1_RS02045
old locus tag: SG0222
pseudo: true
so part of: sequence
location: 406203..406841
location: region:406203-406841:1
so has part: feature:406203-406841:1:exon
subclass of: SO_0000010

position:406203:1
position: 406203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406841:1
position: 406841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406203-406841:1:exon

SGP1_RS02045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: mtgA
locus tag: SGP1_RS02045
old locus tag: SG0222
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012666698.1
GO component: GO:0016020 - membrane [Evidence IEA]; GO:0009274 - peptidoglycan-based cell wall [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: monofunctional biosynthetic peptidoglycan transglycosylase
SIO_010081: SGP1_RS02045
subclass of: SO_0000673
so part of: SGP1_RS02045
location: 406203..406841
location: region:406203-406841:1
so has part: feature:406203-406841:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:406203-406841:1:exon

SGP1_RS02050
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: dolP
locus tag: SGP1_RS02050
old locus tag: SG0223
so part of: sequence
location: complement(406849..407424)
location: region:406849-407424:-1
so has part: feature:406849-407424:-1:exon
subclass of: SO_0000010

position:406849:-1
position: 406849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:407424:-1
position: 407424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406849-407424:-1:exon

SGP1_RS02050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: dolP
locus tag: SGP1_RS02050
old locus tag: SG0223
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012822116.1
GO process: GO:0006970 - response to osmotic stress [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: division/outer membrane stress-associated lipid-binding lipoprotein
translation: MKVHTPLLLLCTALMLQGCVGAVVVGTAAVATKTATDPRTVGTQLDDGTLEARVANALAKDQQLKKDARIINTAYQGKVLLTGQAPTPELAERAKQIAMSVDGATEVYNEIRQGQPVSLGRASMDTWITTKIRSQLLASDAVKSSNVKVTTENGEVFLLGLVTNAEGKAAAEMASKVNGVKHVTTAFTYLQ
SIO_010081: SGP1_RS02050
subclass of: SO_0000673
so part of: SGP1_RS02050
location: complement(406849..407424)
location: region:406849-407424:-1
so has part: feature:406849-407424:-1:exon

WP_011410087.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:406849-407424:-1:exon

SGP1_RS02055
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: diaA
locus tag: SGP1_RS02055
old locus tag: SG0224
so part of: sequence
location: complement(407434..408024)
location: region:407434-408024:-1
so has part: feature:407434-408024:-1:exon
subclass of: SO_0000010

position:407434:-1
position: 407434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408024:-1
position: 408024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:407434-408024:-1:exon

SGP1_RS02055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: diaA
locus tag: SGP1_RS02055
old locus tag: SG0224
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005228994.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DnaA initiator-associating protein DiaA
translation: MLERIKGCFTESIQTQIAAAEALPDAIAHATNVLAQALLDDKKILCCGNGTSAANAQHFAACMLNRFEAERPSLPAMALNADTVVLTAIANDRQHDEIYAKQVRALGQAGDVLLAISTRGNSRDIVKAVEAAVTRDMKIIALTGYDGGELAGLLGQQDVEIRIPSHRSARIQEMHMLTVNCLCDLVDNKLFPHLDD
SIO_010081: SGP1_RS02055
subclass of: SO_0000673
so part of: SGP1_RS02055
location: complement(407434..408024)
location: region:407434-408024:-1
so has part: feature:407434-408024:-1:exon

WP_011410088.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:407434-408024:-1:exon

SGP1_RS02060
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02060
pseudo: true
so part of: sequence
location: complement(408063..408396)
location: region:408063-408396:-1
so has part: feature:408063-408396:-1:exon
subclass of: SO_0000010

position:408063:-1
position: 408063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408396:-1
position: 408396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408063-408396:-1:exon

SGP1_RS02060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004958192.1
GO function: GO:0004518 - nuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: YraN family protein
SIO_010081: SGP1_RS02060
subclass of: SO_0000673
so part of: SGP1_RS02060
location: complement(408063..408396)
location: region:408063-408396:-1
so has part: feature:408063-408396:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:408063-408396:-1:exon

SGP1_RS02065
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02065
old locus tag: SG0226
so part of: sequence
location: complement(408354..410366)
location: region:408354-410366:-1
so has part: feature:408354-410366:-1:exon
subclass of: SO_0000010

position:408354:-1
position: 408354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:410366:-1
position: 410366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408354-410366:-1:exon

SGP1_RS02065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02065
old locus tag: SG0226
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017801383.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: penicillin-binding protein activator
translation: MLYSYVLVFKTGRLLPVVLASLILAACTAQGPESQTGHAAIPANANADYYLQQMQQSSNDTKTDYQLLAIRALIKEGRLPQAQQQLAALQQIDSASLDAPQRLRYTQAMINAGQSRPSLDLVRAYIAQAPLLTDPAARQQNIDKTWQTLVSLPSPQSNLVINADENILQGWLDLLRIYQDNRQDPTLLQAAIKDWQTRYPQNPAAKTLPTPLSQVQNYSSSSVGGIALLLPLNGQAQVFSNAIQQGFSAAKNGLTTQQSALEQDASAAGQSTDGVPQNDGTAGTEPAGGSANQNGPVTTPGTRPDPAASGVDGQASAADNAPQATTLSGQSAGGQPSAAPSAASGVPVKVYDTSSQPLPALLAQAQRDGASMIIGPLLKNDVEQLYNDNAVAASAGTLNILALNQPEHLQPRPNICYFALSPEDEARDAANHIHQQGRQQPLLLLPRGALGDRIAKAFSDAWHQAGGATVLEQRFGSSAELKQNINSGSGISLTGTPVAAGAAVTIAGLTIPVPQDNGAVSPSGGAIDAVYIIATPVELALIKPMIDMRVSSRSRLALYASSRSYQADAGPDYSLEMEGLEFSDIPLLTGAHPALLSQISAQFRGDYSLVRLYAMGIDAWALANHFSEMRQIPGFQVAGETGTLSATPDCVINRTLSWLKYQRGQMIAAQ
SIO_010081: SGP1_RS02065
subclass of: SO_0000673
so part of: SGP1_RS02065
location: complement(408354..410366)
location: region:408354-410366:-1
so has part: feature:408354-410366:-1:exon

WP_041867331.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:408354-410366:-1:exon

SGP1_RS02070
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: rsmI
locus tag: SGP1_RS02070
old locus tag: SG0225
so part of: sequence
location: 410429..411295
location: region:410429-411295:1
so has part: feature:410429-411295:1:exon
subclass of: SO_0000010

position:410429:1
position: 410429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:411295:1
position: 411295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:410429-411295:1:exon

SGP1_RS02070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: rsmI
locus tag: SGP1_RS02070
old locus tag: SG0225
EC number: 2.1.1.198
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004170906.1
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase
translation: MNQHQQADISASTLYVVPTPIGNLEDITRRALSVLQGVDLIAAEDTRHTGLLLQHFAINARLFALHDHNEQQKADILLEKLQDGQSIALVSDAGTPLINDPGYHLVRRCREAGIRVVPLPGACAAITALSAAGLPSDRFCYEGFLPAKRKARLDSLQALTQEPRTLIFYESTHRLLESLEDMTIAWGPLRYVVLARELTKTWETLYGAPVGEILAWVQEDEKRRRGEMVLIVEGYHAPDDVLPPEALRTLALLQVELPLKKAAALAAEIHGVKKNALYRYGLDRQQKA
SIO_010081: SGP1_RS02070
subclass of: SO_0000673
so part of: SGP1_RS02070
location: 410429..411295
location: region:410429-411295:1
so has part: feature:410429-411295:1:exon

WP_011410090.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:410429-411295:1:exon

SGP1_RS25230
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: rnpB
locus tag: SGP1_RS25230
so part of: sequence
location: 411371..411749
location: region:411371-411749:1
so has part: feature:411371-411749:1:exon
subclass of: SO_0000011

position:411371:1
position: 411371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:411749:1
position: 411749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:411371-411749:1:exon

SGP1_RS25230
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 343509
nc RNA class: RNase_P_RNA
gene: rnpB
locus tag: SGP1_RS25230
product: RNase P RNA component class A
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00010
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: SGP1_RS25230
subclass of: SO_0000673
so part of: SGP1_RS25230
location: 411371..411749
location: region:411371-411749:1
so has part: feature:411371-411749:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:411371-411749:1:exon

SGP1_RS26370
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS26370
old locus tag: SG0227
pseudo: true
so part of: sequence
location: complement(411810..412314)
location: region:411810-412314:-1
so has part: feature:411810-412314:-1:exon
subclass of: SO_0000010

position:411810:-1
position: 411810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412314:-1
position: 412314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:411810-412314:-1:exon

SGP1_RS26370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS26370
old locus tag: SG0227
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002210150.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: pirin family protein
SIO_010081: SGP1_RS26370
subclass of: SO_0000673
so part of: SGP1_RS26370
location: complement(411810..412314)
location: region:411810-412314:-1
so has part: feature:411810-412314:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:411810-412314:-1:exon

SGP1_RS02080
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02080
pseudo: true
so part of: sequence
location: 412424..413308
location: region:412424-413308:1
so has part: feature:412424-413308:1:exon
subclass of: SO_0000010

position:412424:1
position: 412424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413308:1
position: 413308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412424-413308:1:exon

SGP1_RS02080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02080
inference: COORDINATES: similar to AA sequence:RefSeq:NP_312014.1
GO function: GO:0001216 - DNA-binding transcription activator activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
SIO_010081: SGP1_RS02080
subclass of: SO_0000673
so part of: SGP1_RS02080
location: 412424..413308
location: region:412424-413308:1
so has part: feature:412424-413308:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:412424-413308:1:exon

SGP1_RS02085
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02085
pseudo: true
so part of: sequence
location: complement(413339..414337)
location: region:413339-414337:-1
so has part: feature:413339-414337:-1:exon
subclass of: SO_0000010

position:413339:-1
position: 413339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:414337:-1
position: 414337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:413339-414337:-1:exon

SGP1_RS02085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02085
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009634839.1
GO function: GO:0004364 - glutathione transferase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: glutathione S-transferase family protein
SIO_010081: SGP1_RS02085
subclass of: SO_0000673
so part of: SGP1_RS02085
location: complement(413339..414337)
location: region:413339-414337:-1
so has part: feature:413339-414337:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:413339-414337:-1:exon

SGP1_RS02090
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02090
old locus tag: SG0229
so part of: sequence
location: 414937..415542
location: region:414937-415542:1
so has part: feature:414937-415542:1:exon
subclass of: SO_0000010

position:414937:1
position: 414937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415542:1
position: 415542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414937-415542:1:exon

SGP1_RS02090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02090
old locus tag: SG0229
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013201208.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TetR/AcrR family transcriptional regulator
translation: MNSVTTTETNPVRDSILAHGMRIMAGKGFSAVGLNEILTAAGVPKGSFYHYFGSKDAFGEALLDSYFADYLAKLDATLDVPGLTMAQRLMNYWQNWQDTQSFYDCQGKCLAVKLGAEVADLSEAMRQALQRGTSGIIDRLARAIEGGMAEGSLSVNGSPIKVAQSLYQLWLGASVMVKIVRHTQPFATAIMTTRHILHLSP
SIO_010081: SGP1_RS02090
subclass of: SO_0000673
so part of: SGP1_RS02090
location: 414937..415542
location: region:414937-415542:1
so has part: feature:414937-415542:1:exon

WP_041866549.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:414937-415542:1:exon

SGP1_RS02095
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02095
pseudo: true
so part of: sequence
location: 415644..416339
location: region:415644-416339:1
so has part: feature:415644-416339:1:exon
subclass of: SO_0000010

position:415644:1
position: 415644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:416339:1
position: 416339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:415644-416339:1:exon

SGP1_RS02095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02095
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014333871.1
GO function: GO:0019172 - glyoxalase III activity [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: type 1 glutamine amidotransferase domain-containing protein
SIO_010081: SGP1_RS02095
subclass of: SO_0000673
so part of: SGP1_RS02095
location: 415644..416339
location: region:415644-416339:1
so has part: feature:415644-416339:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:415644-416339:1:exon

SGP1_RS02100
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02100
so part of: sequence
location: complement(416457..416690)
location: region:416457-416690:-1
so has part: feature:416457-416690:-1:exon
subclass of: SO_0000010

position:416457:-1
position: 416457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:416690:-1
position: 416690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416457-416690:-1:exon

SGP1_RS02100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02100
inference: COORDINATES: protein motif:HMM:NF025363.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YqjK family protein
translation: MSERKPKHAKKLLLLRKSSSSGRRWIRVLSLCRYLIAGTSLLALYNVRHHSRLVRWAKRGVGILGAVKMVRKALESR
SIO_010081: SGP1_RS02100
subclass of: SO_0000673
so part of: SGP1_RS02100
location: complement(416457..416690)
location: region:416457-416690:-1
so has part: feature:416457-416690:-1:exon

WP_041866550.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:416457-416690:-1:exon

SGP1_RS30535
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS30535
so part of: sequence
location: complement(416687..416833)
location: region:416687-416833:-1
so has part: feature:416687-416833:-1:exon
subclass of: SO_0000010

position:416687:-1
position: 416687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:416833:-1
position: 416833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416687-416833:-1:exon

SGP1_RS30535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS30535
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLGSTREELQVDHNILEKLQDEIKKEEAERKHDEKVKNKQRDRIAEAK
SIO_010081: SGP1_RS30535
subclass of: SO_0000673
so part of: SGP1_RS30535
location: complement(416687..416833)
location: region:416687-416833:-1
so has part: feature:416687-416833:-1:exon

WP_158302310.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:416687-416833:-1:exon

SGP1_RS02105
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02105
pseudo: true
so part of: sequence
location: complement(416834..417112)
location: region:416834-417112:-1
so has part: feature:416834-417112:-1:exon
subclass of: SO_0000010

position:416834:-1
position: 416834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:417112:-1
position: 417112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416834-417112:-1:exon

SGP1_RS02105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02105
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002441903.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF883 family protein
SIO_010081: SGP1_RS02105
subclass of: SO_0000673
so part of: SGP1_RS02105
location: complement(416834..417112)
location: region:416834-417112:-1
so has part: feature:416834-417112:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:416834-417112:-1:exon

SGP1_RS02110
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: mzrA
locus tag: SGP1_RS02110
so part of: sequence
location: complement(417483..417869)
location: region:417483-417869:-1
so has part: feature:417483-417869:-1:exon
subclass of: SO_0000010

position:417483:-1
position: 417483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:417869:-1
position: 417869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:417483-417869:-1:exon

SGP1_RS02110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: mzrA
locus tag: SGP1_RS02110
inference: COORDINATES: protein motif:HMM:NF007915.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EnvZ/OmpR regulon moderator MzrA
translation: MKESGCVGFIKRFRLGLLAVAVLVSLTLLLPTLCRDDSTLQITVAHERGSLPDGFFLYQLLEDRGIRVKSITPAKDSMIIHLDTPEQAQAAQLVLQHHLPEGYAILKSRRYSGWQWLYRPSADEELLG
SIO_010081: SGP1_RS02110
subclass of: SO_0000673
so part of: SGP1_RS02110
location: complement(417483..417869)
location: region:417483-417869:-1
so has part: feature:417483-417869:-1:exon

WP_050747342.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:417483-417869:-1:exon

SGP1_RS02115
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02115
old locus tag: SG0230
so part of: sequence
location: complement(417869..418540)
location: region:417869-418540:-1
so has part: feature:417869-418540:-1:exon
subclass of: SO_0000010

position:418540:-1
position: 418540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:417869-418540:-1:exon

SGP1_RS02115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02115
old locus tag: SG0230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014889121.1
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DedA family protein
translation: MDIFKELLHALWQQDFETLSDPSLVWTIYLLVFVILFLENGLLPAAFLPGDSLLILLGVLIAKGTLNFPLVLVLLTVAASLGSWISYLQGKWLENNRVVKSWLAHLPAHYHQRAHRMFHRHGLSALLIGRFIAFVRTLLPTIAGLSGLSSSRFQFFNWISAFLWVFILTLVGFILGKTPVFQRYEEELMLCLMLLPLALLTIGLVSSLVVIWRRKRLTDSDKE
SIO_010081: SGP1_RS02115
subclass of: SO_0000673
so part of: SGP1_RS02115
location: complement(417869..418540)
location: region:417869-418540:-1
so has part: feature:417869-418540:-1:exon

WP_011410094.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:417869-418540:-1:exon

SGP1_RS02120
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02120
old locus tag: SG0231
so part of: sequence
location: 419477..420028
location: region:419477-420028:1
so has part: feature:419477-420028:1:exon
subclass of: SO_0000010

position:419477:1
position: 419477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420028:1
position: 420028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:419477-420028:1:exon

SGP1_RS02120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02120
old locus tag: SG0231
inference: COORDINATES: protein motif:HMM:NF017916.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF969 family protein
translation: MWPLIGIVILDFALHFNPLVVVTLAVLITGLTSGLDLPAVVSDFGTAYVQNRYMALIWLALPVIGLLEHNGLREQAQRLVTRIHAASLSSILILYMLMRQLTAVLGLTALGGHAQMVRPLIAPMAEGAARKRLGYLPLAEREKIRAYCAAVDNIGVFFGGRHIYRHRLDLIDERVYGAKRLYY
SIO_010081: SGP1_RS02120
subclass of: SO_0000673
so part of: SGP1_RS02120
location: 419477..420028
location: region:419477-420028:1
so has part: feature:419477-420028:1:exon

WP_279379432.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:419477-420028:1:exon

SGP1_RS34895
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS34895
so part of: sequence
location: 419991..420173
location: region:419991-420173:1
so has part: feature:419991-420173:1:exon
subclass of: SO_0000010

position:419991:1
position: 419991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420173:1
position: 420173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:419991-420173:1:exon

SGP1_RS34895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS34895
inference: COORDINATES: protein motif:HMM:NF017916.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKGFMEQNDYIIELLNFAVWAIHTAFFAFIIHSCRMTFYQCALIRRYAAQSKSRPSGEYK
SIO_010081: SGP1_RS34895
subclass of: SO_0000673
so part of: SGP1_RS34895
location: 419991..420173
location: region:419991-420173:1
so has part: feature:419991-420173:1:exon

WP_279379433.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:419991-420173:1:exon

SGP1_RS02125
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02125
old locus tag: SG0232
so part of: sequence
location: 420173..420676
location: region:420173-420676:1
so has part: feature:420173-420676:1:exon
subclass of: SO_0000010

position:420676:1
position: 420676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:420173-420676:1:exon

SGP1_RS02125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02125
old locus tag: SG0232
inference: COORDINATES: protein motif:HMM:NF017931.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF979 family protein
translation: MTILDALYLLVGIMFAATAIINLRDSLNSKRWKSAGFWGINAIIFIFGRYLPPLANRILVIVMVLLAGLGGLGRSGKPETSLEQREVRASRFGNRLFIPMLLIPLVTMLGTFAFKSLTWNGALLIPAGSSTLAPLAAGHDAGNGAGGRRKPLVWRRSRLSGLGAGGG
SIO_010081: SGP1_RS02125
subclass of: SO_0000673
so part of: SGP1_RS02125
location: 420173..420676
location: region:420173-420676:1
so has part: feature:420173-420676:1:exon

WP_050747343.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:420173-420676:1:exon

SGP1_RS26375
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS26375
pseudo: true
so part of: sequence
location: 420609..421022
location: region:420609-421022:1
so has part: feature:420609-421022:1:exon
subclass of: SO_0000010

position:420609:1
position: 420609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421022:1
position: 421022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:420609-421022:1:exon

SGP1_RS26375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS26375
inference: COORDINATES: protein motif:HMM:NF022646.2
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF2891 family protein
SIO_010081: SGP1_RS26375
subclass of: SO_0000673
so part of: SGP1_RS26375
location: 420609..421022
location: region:420609-421022:1
so has part: feature:420609-421022:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:420609-421022:1:exon

SGP1_RS02130
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: exuR
locus tag: SGP1_RS02130
pseudo: true
so part of: sequence
location: complement(421056..421832)
location: region:421056-421832:-1
so has part: feature:421056-421832:-1:exon
subclass of: SO_0000010

position:421056:-1
position: 421056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:421832:-1
position: 421832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421056-421832:-1:exon

SGP1_RS02130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: exuR
locus tag: SGP1_RS02130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017894124.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transcriptional regulator ExuR
SIO_010081: SGP1_RS02130
subclass of: SO_0000673
so part of: SGP1_RS02130
location: complement(421056..421832)
location: region:421056-421832:-1
so has part: feature:421056-421832:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:421056-421832:-1:exon

SGP1_RS02135
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02135
pseudo: true
so part of: sequence
location: <421901..422634
location: region:421901-422634:1
so has part: feature:421901-422634:1:exon
subclass of: SO_0000010

position:421901:1
position: 421901
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:422634:1
position: 422634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421901-422634:1:exon

SGP1_RS02135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02135
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013316279.1
GO function: GO:0016829 - lyase activity [Evidence IEA]
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: UxaA family hydrolase
SIO_010081: SGP1_RS02135
subclass of: SO_0000673
so part of: SGP1_RS02135
location: <421901..422634
location: region:421901-422634:1
so has part: feature:421901-422634:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:421901-422634:1:exon

SGP1_RS02140
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02140
pseudo: true
so part of: sequence
location: 422791..423341
location: region:422791-423341:1
so has part: feature:422791-423341:1:exon
subclass of: SO_0000010

position:422791:1
position: 422791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:423341:1
position: 423341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422791-423341:1:exon

SGP1_RS02140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006320511.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: YgjV family protein
SIO_010081: SGP1_RS02140
subclass of: SO_0000673
so part of: SGP1_RS02140
location: 422791..423341
location: region:422791-423341:1
so has part: feature:422791-423341:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:422791-423341:1:exon

SGP1_RS02145
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02145
old locus tag: SG0235
so part of: sequence
location: complement(423375..424340)
location: region:423375-424340:-1
so has part: feature:423375-424340:-1:exon
subclass of: SO_0000010

position:423375:-1
position: 423375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:424340:-1
position: 424340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423375-424340:-1:exon

SGP1_RS02145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02145
old locus tag: SG0235
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007369984.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TerC family protein
translation: MHTVGNTLLWGSFAVVVIIMLAVDLMMQGRAGDKPPSMKQAALWSLLWVALALVFNVLFWAYLLHTESRVVAYSQALAFLTGYLLEKTLAADNVFVWLMLFSYFAVPLSLQRRLLTWGILGAIGLRAVMVFAGSWLISEFQWWLYVFGAFLLFTGVKMALPGHDEQDIGKRPLVRWLYYHLRVTNELHGERFFIRRKGLLFATPLLLALIMVEFSDVIFSLDSIPAIFAVTTDPFIVLTSNLFAILGLRAMYFLLANVAERFSLLKYGLAVILVFIGIKMLIVDFIHIPVAVSLAMVAVTLTVTLLLNAWVNRRQSRIRQE
SIO_010081: SGP1_RS02145
subclass of: SO_0000673
so part of: SGP1_RS02145
location: complement(423375..424340)
location: region:423375-424340:-1
so has part: feature:423375-424340:-1:exon

WP_011410099.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:423375-424340:-1:exon

SGP1_RS02150
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02150
old locus tag: SG0236
pseudo: true
so part of: sequence
location: complement(424524..425102)
location: region:424524-425102:-1
so has part: feature:424524-425102:-1:exon
subclass of: SO_0000010

position:424524:-1
position: 424524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:425102:-1
position: 425102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:424524-425102:-1:exon

SGP1_RS02150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02150
old locus tag: SG0236
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004948394.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: SGP1_RS02150
subclass of: SO_0000673
so part of: SGP1_RS02150
location: complement(424524..425102)
location: region:424524-425102:-1
so has part: feature:424524-425102:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:424524-425102:-1:exon

SGP1_RS02155
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02155
pseudo: true
so part of: sequence
location: complement(425102..426056)
location: region:425102-426056:-1
so has part: feature:425102-426056:-1:exon
subclass of: SO_0000010

position:426056:-1
position: 426056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425102-426056:-1:exon

SGP1_RS02155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009087342.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Gfo/Idh/MocA family oxidoreductase
SIO_010081: SGP1_RS02155
subclass of: SO_0000673
so part of: SGP1_RS02155
location: complement(425102..426056)
location: region:425102-426056:-1
so has part: feature:425102-426056:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:425102-426056:-1:exon

SGP1_RS26385
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS26385
pseudo: true
so part of: sequence
location: <426278..427040
location: region:426278-427040:1
so has part: feature:426278-427040:1:exon
subclass of: SO_0000010

position:426278:1
position: 426278
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:427040:1
position: 427040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426278-427040:1:exon

SGP1_RS26385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS26385
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012815075.1
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: methyltransferase
SIO_010081: SGP1_RS26385
subclass of: SO_0000673
so part of: SGP1_RS26385
location: <426278..427040
location: region:426278-427040:1
so has part: feature:426278-427040:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:426278-427040:1:exon

SGP1_RS02165
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02165
so part of: sequence
location: 427122..427433
location: region:427122-427433:1
so has part: feature:427122-427433:1:exon
subclass of: SO_0000010

position:427122:1
position: 427122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:427433:1
position: 427433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:427122-427433:1:exon

SGP1_RS02165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02165
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012773245.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLLQELETRLDAAFSLLENSVLQRQQVWRQEYKSLQHQLEQCQAREARLREHNAMLVGKLNSLDSSPDRTPLLHKIKIISSHIDALAKDAAAFRQSCQHSSAR
SIO_010081: SGP1_RS02165
subclass of: SO_0000673
so part of: SGP1_RS02165
location: 427122..427433
location: region:427122-427433:1
so has part: feature:427122-427433:1:exon

WP_041866551.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:427122-427433:1:exon

SGP1_RS02170
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02170
old locus tag: SG0237
so part of: sequence
location: complement(427521..428180)
location: region:427521-428180:-1
so has part: feature:427521-428180:-1:exon
subclass of: SO_0000010

position:427521:-1
position: 427521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428180:-1
position: 428180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:427521-428180:-1:exon

SGP1_RS02170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02170
old locus tag: SG0237
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLYNPVHQDSIRDVARYLLDDLTLGLDQAREKLQHLSSGQMLLLPMMSTPVCPYARTALTGHFSADVVLKKDDYWHFAVFDNLDDSDTEPLKEAVLGQLIPKKRGRYYFFQQHFQQRNDCAVHVYNFFSRCLASKEAFFTGPALWGKLFDDYCQEAADLTQAPGEDSTLSSTMLHRYFMLECLATGYRQDEWGMVQQAMVARPRFSFCPVPVAARRAEC
SIO_010081: SGP1_RS02170
subclass of: SO_0000673
so part of: SGP1_RS02170
location: complement(427521..428180)
location: region:427521-428180:-1
so has part: feature:427521-428180:-1:exon

WP_158302311.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:427521-428180:-1:exon

SGP1_RS28980
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS28980
so part of: sequence
location: complement(428189..428581)
location: region:428189-428581:-1
so has part: feature:428189-428581:-1:exon
subclass of: SO_0000010

position:428189:-1
position: 428189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428581:-1
position: 428581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428189-428581:-1:exon

SGP1_RS28980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS28980
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNGHAPASGTLGLGLALCDRMAQDGELTAVQYPLACAAHNVLLSIASGAMQVPQPPLEHLARLCHMELKWQVVQPTKISEIALRELWQNFCQLAQLPAEFGTIADSGEQVDWHGCIRAFRYCPRPMTMCW
SIO_010081: SGP1_RS28980
subclass of: SO_0000673
so part of: SGP1_RS28980
location: complement(428189..428581)
location: region:428189-428581:-1
so has part: feature:428189-428581:-1:exon

WP_148203337.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:428189-428581:-1:exon

SGP1_RS02180
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02180
old locus tag: SG0238
so part of: sequence
location: complement(429269..430018)
location: region:429269-430018:-1
so has part: feature:429269-430018:-1:exon
subclass of: SO_0000010

position:429269:-1
position: 429269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430018:-1
position: 430018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429269-430018:-1:exon

SGP1_RS02180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02180
old locus tag: SG0238
inference: COORDINATES: protein motif:HMM:NF027767.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage repressor protein CI
translation: MNTVKRLIENSSGIRHHSLLTKRKNKPLKLNVNISYANNNLQGIMYLCGNHAMLTINFKAGGGAVLDRIIQAYGFDTKIEYCKHLGITASNLSMRYKRDLYPSDLVVKCLVDTGVRLEWLTGGQGDMFAGPNARNQSQQQTLEVPAKHLLRGEIYDAGTFYLDIGWFKPERDIPVRPGMLMDGAKRYIVDYQFNEVNDGRWLTEIEGRLMVRDLFRIPIGRVKVCGGEMPFECGLQDIRIIAQVILSCV
SIO_010081: SGP1_RS02180
subclass of: SO_0000673
so part of: SGP1_RS02180
location: complement(429269..430018)
location: region:429269-430018:-1
so has part: feature:429269-430018:-1:exon

WP_148203338.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:429269-430018:-1:exon

SGP1_RS02185
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02185
so part of: sequence
location: 430721..430906
location: region:430721-430906:1
so has part: feature:430721-430906:1:exon
subclass of: SO_0000010

position:430721:1
position: 430721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:430906:1
position: 430906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:430721-430906:1:exon

SGP1_RS02185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02185
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013027286.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDLTFDKLVLLERMELIARLTTTVECHERDKEIALMMIAEIAQSILDSDIVQNQNREGLAF
SIO_010081: SGP1_RS02185
subclass of: SO_0000673
so part of: SGP1_RS02185
location: 430721..430906
location: region:430721-430906:1
so has part: feature:430721-430906:1:exon

WP_041866553.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:430721-430906:1:exon

SGP1_RS26390
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS26390
so part of: sequence
location: 432615..432818
location: region:432615-432818:1
so has part: feature:432615-432818:1:exon
subclass of: SO_0000010

position:432615:1
position: 432615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:432818:1
position: 432818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:432615-432818:1:exon

SGP1_RS26390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS26390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005281637.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ogr/Delta-like zinc finger family protein
translation: MMHCPLCKSSAHTRSSRYLSETTKERYHQCTNINCGHTFKTLESITGSIVKPGVVAAVVPHECVSTD
SIO_010081: SGP1_RS26390
subclass of: SO_0000673
so part of: SGP1_RS26390
location: 432615..432818
location: region:432615-432818:1
so has part: feature:432615-432818:1:exon

WP_074013219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:432615-432818:1:exon

SGP1_RS02190
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02190
pseudo: true
so part of: sequence
location: complement(433721..434539)
location: region:433721-434539:-1
so has part: feature:433721-434539:-1:exon
subclass of: SO_0000010

position:433721:-1
position: 433721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434539:-1
position: 434539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433721-434539:-1:exon

SGP1_RS02190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001195265.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: aldo/keto reductase
SIO_010081: SGP1_RS02190
subclass of: SO_0000673
so part of: SGP1_RS02190
location: complement(433721..434539)
location: region:433721-434539:-1
so has part: feature:433721-434539:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:433721-434539:-1:exon

SGP1_RS02195
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02195
old locus tag: SG0239
so part of: sequence
location: 434897..436027
location: region:434897-436027:1
so has part: feature:434897-436027:1:exon
subclass of: SO_0000010

position:434897:1
position: 434897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436027:1
position: 436027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:434897-436027:1:exon

SGP1_RS02195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02195
old locus tag: SG0239
inference: COORDINATES: protein motif:HMM:NF013257.2
GO function: GO:0016757 - glycosyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 9 protein
translation: MHILRHLNRAKNAALRQLKFKGLNAWLNMTCRPQAWAPDKIKRILLLRLDDKIGDMVITTGTARQLADKGYHISVLTGPVCEALLAYSDAVHHTYRYDKRMSLSVLRQQRFDVVIDFDDVRNYERLRLLHRLAPRYVIGFNKSGSARYAPQLVWRDSERHITERHRAVLALFNLLPAPFRYSLGRDPSAVDALAPYLSRPSDEWIIAINPFTGSEDKDFSREQVAGLIAHLRRRNVRFRVLLIGRGDLLRRWELADAAFIVDSTINTAVEIVRSADLVVSPDTSIVHMACAFNTPLVAIYNTRRLKDSGLVGYNIWAPHYDNAVQLVIDQPSVSDLPLDALCLAVDDKLADITRQRRNGELTRCRAATSAEDYRQR
SIO_010081: SGP1_RS02195
subclass of: SO_0000673
so part of: SGP1_RS02195
location: 434897..436027
location: region:434897-436027:1
so has part: feature:434897-436027:1:exon

WP_011410103.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:434897-436027:1:exon

SGP1_RS02200
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02200
old locus tag: SG0240
so part of: sequence
location: complement(435977..437152)
location: region:435977-437152:-1
so has part: feature:435977-437152:-1:exon
subclass of: SO_0000010

position:435977:-1
position: 435977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:437152:-1
position: 437152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435977-437152:-1:exon

SGP1_RS02200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02200
old locus tag: SG0240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020805404.1
GO process: GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: O-antigen ligase family protein
translation: MSMLLIKKYSRLENVTLIMFTAFLFFSTLFCNVTKVNNLFHLSCGLLLLSLLFRGQLYRDAQQDRVTLRGLGLIALMAVYFALSNIWGGDAGETISTLTHGVYLIIFTLLGSLALQNISRHTLMVAAIAGVTVLSVFTIATDASKVIYLRKVSEFNPGPDNVIDLAGYCAIAIMLSMIIARERRRVGYLLLAVIPAVMLVMTQSRGPLLALVLVMLATLRWRRSTPRAMGFAVLLALLAALLLIFTPVGDLLLMRFESLSNESGLRLSIWHHVLAEVGLRPWLGLGFNHELNFINYDGTHISTAHSVYLGTLYKGGVIGLALLALLLGYGLLCALRAFRAGYRLEAAIYLFMLLFIASQGMFMISNPRETWILFWLPLAVVFSAGSRAAPG
SIO_010081: SGP1_RS02200
subclass of: SO_0000673
so part of: SGP1_RS02200
location: complement(435977..437152)
location: region:435977-437152:-1
so has part: feature:435977-437152:-1:exon

WP_011410104.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:435977-437152:-1:exon

SGP1_RS02205
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02205
old locus tag: SG0241
so part of: sequence
location: 437799..438524
location: region:437799-438524:1
so has part: feature:437799-438524:1:exon
subclass of: SO_0000010

position:437799:1
position: 437799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438524:1
position: 438524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437799-438524:1:exon

SGP1_RS02205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02205
old locus tag: SG0241
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008812920.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GntR family transcriptional regulator
translation: MRLYQEIGQKLRDAIQRGAFKPGDKLPAERDLAAQFEVSRSVVREALILLELEQCVKIRKGSGVYVLPSPESTLTPEPLSDSVSCGVFELLQSRQLMESEIASFAALQANRNDVLELRKAIELEREQLSSDDTDEHFHYLVAAATQNAALVAIMQESWKLRNRSGMWLNQHRDTSDFSARWEWYEDRLRIVQAIQRRDARGAKRAMWQHIENIKNKMLKLADTTAADFDGYMFSSSPLEND
SIO_010081: SGP1_RS02205
subclass of: SO_0000673
so part of: SGP1_RS02205
location: 437799..438524
location: region:437799-438524:1
so has part: feature:437799-438524:1:exon

WP_041866554.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:437799-438524:1:exon

SGP1_RS02210
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02210
old locus tag: SG0242
so part of: sequence
location: 438987..439628
location: region:438987-439628:1
so has part: feature:438987-439628:1:exon
subclass of: SO_0000010

position:438987:1
position: 438987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439628:1
position: 439628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438987-439628:1:exon

SGP1_RS02210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02210
old locus tag: SG0242
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLSSATFPMMGTHCALSGSRSLKLTTWANSAPIDQPPAPGSIGLAIKRMEVPGSLVHLSPEPSVAGIGDKDVRAFGCFVDLQSQGNRWMPGVRYVNSADGEHIKRWQYFRVNEGVDHRRWNYGHDGWHKVGIDGQWYGQRQADGVGDGFQWIEGGDQDLVANEADDKINWMYFRLTIDVSRREYVELQCMDKIMDLRGKNRRWRQNIKALRVY
SIO_010081: SGP1_RS02210
subclass of: SO_0000673
so part of: SGP1_RS02210
location: 438987..439628
location: region:438987-439628:1
so has part: feature:438987-439628:1:exon

WP_148203339.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:438987-439628:1:exon

SGP1_RS02215
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02215
so part of: sequence
location: 439741..440076
location: region:439741-440076:1
so has part: feature:439741-440076:1:exon
subclass of: SO_0000010

position:439741:1
position: 439741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440076:1
position: 440076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439741-440076:1:exon

SGP1_RS02215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02215
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKEFYTSVIELHQPISQQFSSEPYECGWASEALFFLTVHPEIADFDHLLVRSKNSPDGVHWTEAPGDATLISEPGLTAIALTQFGGWLRLEIALEGAAQKAMVTLHLALKG
SIO_010081: SGP1_RS02215
subclass of: SO_0000673
so part of: SGP1_RS02215
location: 439741..440076
location: region:439741-440076:1
so has part: feature:439741-440076:1:exon

WP_041866555.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:439741-440076:1:exon

SGP1_RS02220
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02220
so part of: sequence
location: 440208..440582
location: region:440208-440582:1
so has part: feature:440208-440582:1:exon
subclass of: SO_0000010

position:440208:1
position: 440208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440582:1
position: 440582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440208-440582:1:exon

SGP1_RS02220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02220
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: MHS family MFS transporter
translation: MMVPFFLLLNTGEQGPIWLGMFLIYCLCNDAMLGAQAAMLSEAFPPHIRYTGMASSRELAGAVAGGTLPFIAIALQSSAGGEWWQIAVYAIALAVLAAVGALLLSHGHHGWKDQPTRHPTAAEY
SIO_010081: SGP1_RS02220
subclass of: SO_0000673
so part of: SGP1_RS02220
location: 440208..440582
location: region:440208-440582:1
so has part: feature:440208-440582:1:exon

WP_148203340.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:440208-440582:1:exon

SGP1_RS02225
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02225
old locus tag: SG0243
so part of: sequence
location: complement(440946..441785)
location: region:440946-441785:-1
so has part: feature:440946-441785:-1:exon
subclass of: SO_0000010

position:440946:-1
position: 440946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:441785:-1
position: 441785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440946-441785:-1:exon

SGP1_RS02225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02225
old locus tag: SG0243
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006705839.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MQILTPVGIDVASQKFDVAVWKGKAAYKSKAFSNTPKGFDALKKWLEPFGDCHICMEATGAYSEPLSTFLADAGYAVSVENPARIKSFGCSELSRNKTDKGDARMIARYCKLHVPVLWQPLPLNERKLKALVNRLINLKNIGNNPSLKQNRELLESIPGIAGALSSTILGYFGDMSRFDSSKAVVAWAGLNPMLQESGLWKGKSRISKVGNAMIRKALYMPALTAMRYNPAIIALKERMNARNKSGKVVVCAAMKKLLQQAYGVLKSGQVFDAGICLAR
SIO_010081: SGP1_RS02225
subclass of: SO_0000673
so part of: SGP1_RS02225
location: complement(440946..441785)
location: region:440946-441785:-1
so has part: feature:440946-441785:-1:exon

WP_011410107.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:440946-441785:-1:exon

SGP1_RS02230
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02230
pseudo: true
so part of: sequence
location: 442072..443370
location: region:442072-443370:1
so has part: feature:442072-443370:1:exon
subclass of: SO_0000010

position:442072:1
position: 442072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443370:1
position: 443370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442072-443370:1:exon

SGP1_RS02230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004094787.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: integrase family protein
SIO_010081: SGP1_RS02230
subclass of: SO_0000673
so part of: SGP1_RS02230
location: 442072..443370
location: region:442072-443370:1
so has part: feature:442072-443370:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:442072-443370:1:exon

SGP1_RS02235
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02235
so part of: sequence
location: 443367..443729
location: region:443367-443729:1
so has part: feature:443367-443729:1:exon
subclass of: SO_0000010

position:443367:1
position: 443367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443729:1
position: 443729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:443367-443729:1:exon

SGP1_RS02235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02235
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKCYHPEYTGGNEKPHVNDIIKLMMSEIKLSGILSPGVVKIFNRSVLVTANKRMDVCGVFETIFMWIKSVAMKEVKLKIQQLSDAITIKFPSGNIYDLPTIIKNVKYANKKSPFLLIMLR
SIO_010081: SGP1_RS02235
subclass of: SO_0000673
so part of: SGP1_RS02235
location: 443367..443729
location: region:443367-443729:1
so has part: feature:443367-443729:1:exon

WP_041866557.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:443367-443729:1:exon

SGP1_RS02240
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02240
so part of: sequence
location: 444316..444474
location: region:444316-444474:1
so has part: feature:444316-444474:1:exon
subclass of: SO_0000010

position:444316:1
position: 444316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444474:1
position: 444474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444316-444474:1:exon

SGP1_RS02240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011092283.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MNLQERMTRKEAADYIGVTSATMANWACTGKVKIPYYKAVLKKVIYLKSDFD
SIO_010081: SGP1_RS02240
subclass of: SO_0000673
so part of: SGP1_RS02240
location: 444316..444474
location: region:444316-444474:1
so has part: feature:444316-444474:1:exon

WP_041866558.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:444316-444474:1:exon

SGP1_RS02245
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02245
so part of: sequence
location: 445140..445409
location: region:445140-445409:1
so has part: feature:445140-445409:1:exon
subclass of: SO_0000010

position:445140:1
position: 445140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445409:1
position: 445409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445140-445409:1:exon

SGP1_RS02245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02245
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006706651.1
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LuxR C-terminal-related transcriptional regulator
translation: MTPDQLEIAILLSLGLSQKEIAVIRGVAPKTIEIMLGTIKKKFDFPSLNNLLSLFQVRLVFFALSECKRHSHTRSSSSVDNGDEGGTHV
SIO_010081: SGP1_RS02245
subclass of: SO_0000673
so part of: SGP1_RS02245
location: 445140..445409
location: region:445140-445409:1
so has part: feature:445140-445409:1:exon

WP_050747346.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:445140-445409:1:exon

SGP1_RS30540
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS30540
so part of: sequence
location: 445402..445554
location: region:445402-445554:1
so has part: feature:445402-445554:1:exon
subclass of: SO_0000010

position:445402:1
position: 445402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445554:1
position: 445554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445402-445554:1:exon

SGP1_RS30540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS30540
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFKIMITLINHATGDRHEMVHNGPYKTRESAWKDAQRMAYVHEGRRLRHL
SIO_010081: SGP1_RS30540
subclass of: SO_0000673
so part of: SGP1_RS30540
location: 445402..445554
location: region:445402-445554:1
so has part: feature:445402-445554:1:exon

WP_158302312.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:445402-445554:1:exon

SGP1_RS02250
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02250
so part of: sequence
location: 445769..446050
location: region:445769-446050:1
so has part: feature:445769-446050:1:exon
subclass of: SO_0000010

position:445769:1
position: 445769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446050:1
position: 446050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445769-446050:1:exon

SGP1_RS02250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02250
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MADMFISCPYIVYFSCIDPDDEYMTCDCIVEAITAIQATGQVKTYLKQIGFRKIKISKCHLATLYDIEKMNSLIDSYIGFRTEKDTLHQKRIL
SIO_010081: SGP1_RS02250
subclass of: SO_0000673
so part of: SGP1_RS02250
location: 445769..446050
location: region:445769-446050:1
so has part: feature:445769-446050:1:exon

WP_041866559.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:445769-446050:1:exon

SGP1_RS02255
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02255
so part of: sequence
location: 446142..446477
location: region:446142-446477:1
so has part: feature:446142-446477:1:exon
subclass of: SO_0000010

position:446142:1
position: 446142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446477:1
position: 446477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446142-446477:1:exon

SGP1_RS02255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02255
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKSPMLSSAQVIALSKIGKKQPESQSETTHKNHISIESYHKFNRSRDVSVYIYQDLIRREIHIRYPDYIPHLFSYIHDDIVDIFEEIKKKGLCDEWLRQQAASESMNTTE
SIO_010081: SGP1_RS02255
subclass of: SO_0000673
so part of: SGP1_RS02255
location: 446142..446477
location: region:446142-446477:1
so has part: feature:446142-446477:1:exon

WP_050747347.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:446142-446477:1:exon

SGP1_RS30545
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS30545
so part of: sequence
location: 446526..446933
location: region:446526-446933:1
so has part: feature:446526-446933:1:exon
subclass of: SO_0000010

position:446526:1
position: 446526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446933:1
position: 446933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446526-446933:1:exon

SGP1_RS30545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS30545
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHSHLHGEIIQRLIKEFQFVEQGEYLRKGICPYCKKRELFTSIEKPYVLRCGRENKCGSEVIVKAHYDDLFSHWSERYLPTTKQPHAAAEAYLREGRGLDMALIAGCYTQESYHQKGLGTGRCVFPCPAAHTGSA
SIO_010081: SGP1_RS30545
subclass of: SO_0000673
so part of: SGP1_RS30545
location: 446526..446933
location: region:446526-446933:1
so has part: feature:446526-446933:1:exon

WP_050747348.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:446526-446933:1:exon

SGP1_RS28990
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS28990
so part of: sequence
location: 446891..447157
location: region:446891-447157:1
so has part: feature:446891-447157:1:exon
subclass of: SO_0000010

position:446891:1
position: 446891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447157:1
position: 447157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446891-447157:1:exon

SGP1_RS28990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS28990
inference: COORDINATES: protein motif:HMM:NF024554.2
GO function: GO:0003896 - DNA primase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: toprim domain-containing protein
translation: MRFSLPGGTYWERLIDQLERFDRKANFGGRYAGQWWSRAAQALTDQKEIWLVEGIFDAISLNQHGVAAVSLMTCHNYPEKALQALAVL
SIO_010081: SGP1_RS28990
subclass of: SO_0000673
so part of: SGP1_RS28990
location: 446891..447157
location: region:446891-447157:1
so has part: feature:446891-447157:1:exon

WP_050747349.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:446891-447157:1:exon

SGP1_RS28995
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS28995
so part of: sequence
location: 447176..447472
location: region:447176-447472:1
so has part: feature:447176-447472:1:exon
subclass of: SO_0000010

position:447176:1
position: 447176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447472:1
position: 447472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447176-447472:1:exon

SGP1_RS28995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS28995
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLVWALDRGNAGERAIRKHVERSRAEGGKPGQHCPLDGKIKEDWNDLHLKGKLTPKDLETYRYYGVLLIARNATDKALLIFQHTERHEFHFEHDSRLY
SIO_010081: SGP1_RS28995
subclass of: SO_0000673
so part of: SGP1_RS28995
location: 447176..447472
location: region:447176-447472:1
so has part: feature:447176-447472:1:exon

WP_050747350.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:447176-447472:1:exon

SGP1_RS32480
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS32480
so part of: sequence
location: complement(447536..448102)
location: region:447536-448102:-1
so has part: feature:447536-448102:-1:exon
subclass of: SO_0000010

position:447536:-1
position: 447536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:448102:-1
position: 448102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447536-448102:-1:exon

SGP1_RS32480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS32480
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHEGASAVASRINLAPHAFDTAEFASPSRFEQLLDFRYVKRWLPVFVCHRTRVVKVDGDSTWLRGMVNPPRVVCIQIITGFPKFLYLRVIAPYGLYPLHGQLCDGLPCLTQMLCIQRQDHRQYFQQGRQLCGGERRLNWGNTSGEINAQILPGFVCGIGFLEIQGGWVAISNFGYRTGLFQCFGFPFV
SIO_010081: SGP1_RS32480
subclass of: SO_0000673
so part of: SGP1_RS32480
location: complement(447536..448102)
location: region:447536-448102:-1
so has part: feature:447536-448102:-1:exon

WP_050747351.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:447536-448102:-1:exon

SGP1_RS02265
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02265
so part of: sequence
location: complement(448768..448986)
location: region:448768-448986:-1
so has part: feature:448768-448986:-1:exon
subclass of: SO_0000010

position:448768:-1
position: 448768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:448986:-1
position: 448986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:448768-448986:-1:exon

SGP1_RS02265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02265
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004389556.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ogr/Delta-like zinc finger family protein
translation: MQKTARLHPELAVQYCACSNKQCGHTFVQNITFSHTLTPSAKTTDIWLKAAVKGMNSQQRKTLMEFLQQPAA
SIO_010081: SGP1_RS02265
subclass of: SO_0000673
so part of: SGP1_RS02265
location: complement(448768..448986)
location: region:448768-448986:-1
so has part: feature:448768-448986:-1:exon

WP_050747352.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:448768-448986:-1:exon

SGP1_RS02270
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02270
old locus tag: SG0244
so part of: sequence
location: complement(449077..450147)
location: region:449077-450147:-1
so has part: feature:449077-450147:-1:exon
subclass of: SO_0000010

position:449077:-1
position: 449077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450147:-1
position: 450147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449077-450147:-1:exon

SGP1_RS02270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02270
old locus tag: SG0244
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007701044.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage portal protein
translation: MKKRQPRRQAARNSGKAAVSRQRHMSMIKTGTLGNPEPVLTTGTDYRDIWYDNAVDHYSLSIDRLALAQLVNLNGQHGGVLYARRNMVAADYRDGGLSHEQLKAGMFDYLTFGDLAILKVRNGWGEVIALAPLPSLYLRLRKSGEFVILQQGEPLVYPPEDVIFLQQYDPQQQIYGLPDYIGGIHSALLNSEATIFRRLYYHNGAHTGCIIYTNDPNLSPEMEEQIMACVEQGKGVGNFKTLFVSIPKGDPEGIKFIPIGDISAKDEFSNIKNISARDVLNAHRYPAGLAGIIPSNAAGLGDPVKARETYRQDEVIPLQRMLRDAVNHDPEIPAHLHLMFGEEAAKTDTKMALKMI
SIO_010081: SGP1_RS02270
subclass of: SO_0000673
so part of: SGP1_RS02270
location: complement(449077..450147)
location: region:449077-450147:-1
so has part: feature:449077-450147:-1:exon

WP_041866560.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:449077-450147:-1:exon

SGP1_RS23145
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS23145
pseudo: true
so part of: sequence
location: complement(450158..451921)
location: region:450158-451921:-1
so has part: feature:450158-451921:-1:exon
subclass of: SO_0000010

position:450158:-1
position: 450158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451921:-1
position: 451921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450158-451921:-1:exon

SGP1_RS23145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS23145
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001151939.1
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: terminase family protein
SIO_010081: SGP1_RS23145
subclass of: SO_0000673
so part of: SGP1_RS23145
location: complement(450158..451921)
location: region:450158-451921:-1
so has part: feature:450158-451921:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:450158-451921:-1:exon

SGP1_RS02285
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02285
pseudo: true
so part of: sequence
location: 452348..453180
location: region:452348-453180:1
so has part: feature:452348-453180:1:exon
subclass of: SO_0000010

position:452348:1
position: 452348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453180:1
position: 453180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452348-453180:1:exon

SGP1_RS02285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02285
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001534870.1
GO process: GO:0019069 - viral capsid assembly [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: GPO family capsid scaffolding protein
SIO_010081: SGP1_RS02285
subclass of: SO_0000673
so part of: SGP1_RS02285
location: 452348..453180
location: region:452348-453180:1
so has part: feature:452348-453180:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:452348-453180:1:exon

SGP1_RS02290
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02290
old locus tag: SG0245
so part of: sequence
location: 453227..453805
location: region:453227-453805:1
so has part: feature:453227-453805:1:exon
subclass of: SO_0000010

position:453227:1
position: 453227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453805:1
position: 453805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453227-453805:1:exon

SGP1_RS02290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02290
old locus tag: SG0245
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000044254.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2597 family protein
translation: MQLNQRAYALLEKYSDGLAQACGQTRTDRYFSLTDPKETQLRDAMLEDSTFLNLITWLDVDQIQGQVVNVGNLAAAQTQGVPDGCLSGDVAAEGEIELSSKAFAIVNAKARAAGSWRGIAPVDLMWYAKAGEEELKVEAFGCKLIVSDVLDVDPKGGSVMTHKIKFLVTSPDFVRLGGVPYLESALTQKLTG
SIO_010081: SGP1_RS02290
subclass of: SO_0000673
so part of: SGP1_RS02290
location: 453227..453805
location: region:453227-453805:1
so has part: feature:453227-453805:1:exon

WP_011410109.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:453227-453805:1:exon

SGP1_RS02295
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02295
so part of: sequence
location: 453814..454116
location: region:453814-454116:1
so has part: feature:453814-454116:1:exon
subclass of: SO_0000010

position:453814:1
position: 453814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454116:1
position: 454116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453814-454116:1:exon

SGP1_RS02295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02295
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016257346.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage holin family protein
translation: MQEHEKNLVWLLLIGAAIAIGRMLNRDEPITPRLFIARVVLGSAISVAAGAVLILIPGLPVLAVTGLGAALGIPGHQAVELWLRRKGSRWLSTRGRHDIE
SIO_010081: SGP1_RS02295
subclass of: SO_0000673
so part of: SGP1_RS02295
location: 453814..454116
location: region:453814-454116:1
so has part: feature:453814-454116:1:exon

WP_041866562.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:453814-454116:1:exon

SGP1_RS32485
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS32485
so part of: sequence
location: 454255..454467
location: region:454255-454467:1
so has part: feature:454255-454467:1:exon
subclass of: SO_0000010

position:454255:1
position: 454255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454467:1
position: 454467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:454255-454467:1:exon

SGP1_RS32485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS32485
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRSARELEEKLDALQQAQPKEIRTEVVKPVFTRVCVADEFVRLYNHASADAERTLSGRTPGEMPGKITPP
SIO_010081: SGP1_RS32485
subclass of: SO_0000673
so part of: SGP1_RS32485
location: 454255..454467
location: region:454255-454467:1
so has part: feature:454255-454467:1:exon

WP_243466328.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:454255-454467:1:exon

SGP1_RS32490
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS32490
so part of: sequence
location: 454367..454594
location: region:454367-454594:1
so has part: feature:454367-454594:1:exon
subclass of: SO_0000010

position:454367:1
position: 454367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454594:1
position: 454594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:454367-454594:1:exon

SGP1_RS32490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS32490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014344474.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSLSGCITTPAPTPSVPFQAGLLVKCPERLPRLDGTTGKALSGPLLDYLALYPPCAARHNQLVDKIYQREALTHE
SIO_010081: SGP1_RS32490
subclass of: SO_0000673
so part of: SGP1_RS32490
location: 454367..454594
location: region:454367-454594:1
so has part: feature:454367-454594:1:exon

WP_083764644.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:454367-454594:1:exon

SGP1_RS02310
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02310
so part of: sequence
location: 454587..454841
location: region:454587-454841:1
so has part: feature:454587-454841:1:exon
subclass of: SO_0000010

position:454587:1
position: 454587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454841:1
position: 454841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:454587-454841:1:exon

SGP1_RS02310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005171208.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: putative phage tail assembly chaperone
translation: MSKDNRASHIILTIKGQELAFAPNTTAYNNLINDMAMDNKIRRIVVPESKAALDALLALQGAALQIADVVNSQYALKLEIEIKN
SIO_010081: SGP1_RS02310
subclass of: SO_0000673
so part of: SGP1_RS02310
location: 454587..454841
location: region:454587-454841:1
so has part: feature:454587-454841:1:exon

WP_041866564.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:454587-454841:1:exon

SGP1_RS30555
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS30555
so part of: sequence
location: 455031..455432
location: region:455031-455432:1
so has part: feature:455031-455432:1:exon
subclass of: SO_0000010

position:455031:1
position: 455031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455432:1
position: 455432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:455031-455432:1:exon

SGP1_RS30555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS30555
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKQLDFTLSLIDKLTRPLKQAQASVSDFAEKSRTAFSHIGLGAAGLVGAGLSIKGALGPAMAFDEALKSASARGMDDSTLARVGRTPWPLARTMAARPRSLSTQPRLSAPRWGYSARTSCPALRWRPICWRWR
SIO_010081: SGP1_RS30555
subclass of: SO_0000673
so part of: SGP1_RS30555
location: 455031..455432
location: region:455031-455432:1
so has part: feature:455031-455432:1:exon

WP_158302314.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:455031-455432:1:exon

SGP1_RS23155
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS23155
so part of: sequence
location: 455363..456373
location: region:455363-456373:1
so has part: feature:455363-456373:1:exon
subclass of: SO_0000010

position:455363:1
position: 455363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456373:1
position: 456373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:455363-456373:1:exon

SGP1_RS23155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS23155
inference: COORDINATES: protein motif:HMM:TIGR01760.1
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0016032 - viral process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage tail tape measure protein
translation: MGVLSQDELPRFTVAANMLAMAVKSSAGDAVDYMGSMYHQFDSVAEKMGRVPFAEQLASKTDYLAQAFGTHMQTIADLMAGARGVGANYGVSMDERGAGDAGKILGTEASSSYEAFYKVAEDGAKQLGLSFVNSAGQMLSLSEMLTQLQRRYGASIEGNLKAQAELDKAFGDGANVIKQLYGNTDVLNRHIHALGSNDGLKRARDMAEKMIVPWDRLTAIWTAIRIAMGRTLLLVLTPFINKMADGGQKLARWLTLFPHIARVVGYTVLAFLSLAGAGAVVNIAMGVSAFVMVGLKGLWSALTAIVKLHVAALWLYHKEVLAWAAVMRMMRGVLPP
SIO_010081: SGP1_RS23155
subclass of: SO_0000673
so part of: SGP1_RS23155
location: 455363..456373
location: region:455363-456373:1
so has part: feature:455363-456373:1:exon

WP_050747354.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:455363-456373:1:exon

SGP1_RS23160
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS23160
so part of: sequence
location: 456419..456622
location: region:456419-456622:1
so has part: feature:456419-456622:1:exon
subclass of: SO_0000010

position:456419:1
position: 456419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456622:1
position: 456622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456419-456622:1:exon

SGP1_RS23160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS23160
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGAVALLVVGCLALVKYWDTLKATMMQTTAFKLIAAYVSGLASLFTRAWEGISAAGRRCAPTLPTFP
SIO_010081: SGP1_RS23160
subclass of: SO_0000673
so part of: SGP1_RS23160
location: 456419..456622
location: region:456419-456622:1
so has part: feature:456419-456622:1:exon

WP_050747355.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:456419-456622:1:exon

SGP1_RS23165
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS23165
so part of: sequence
location: 456592..456855
location: region:456592-456855:1
so has part: feature:456592-456855:1:exon
subclass of: SO_0000010

position:456592:1
position: 456592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456855:1
position: 456855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456592-456855:1:exon

SGP1_RS23165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS23165
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MCAYFTDFSLSDTFAGMIDGVSALFTGLWASVKATFARTWNTIAETLNHLPGVNLSLSALPGDNTAGVTTSGPAPTRPTSRNAAPTG
SIO_010081: SGP1_RS23165
subclass of: SO_0000673
so part of: SGP1_RS23165
location: 456592..456855
location: region:456592-456855:1
so has part: feature:456592-456855:1:exon

WP_148203342.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:456592-456855:1:exon

SGP1_RS02320
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02320
so part of: sequence
location: 456801..457109
location: region:456801-457109:1
so has part: feature:456801-457109:1:exon
subclass of: SO_0000010

position:456801:1
position: 456801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457109:1
position: 457109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456801-457109:1:exon

SGP1_RS02320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004389572.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2590 family protein
translation: MRPRADAPHEPQRCADWVSITQDCAHALLESGLLTRLVAERSPTLRADLLMQVTLLLEEDERLIPGTVSVSEETPKRLWVTAQIYDFGRIEMSPRCDEQTHD
SIO_010081: SGP1_RS02320
subclass of: SO_0000673
so part of: SGP1_RS02320
location: 456801..457109
location: region:456801-457109:1
so has part: feature:456801-457109:1:exon

WP_041866565.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:456801-457109:1:exon

SGP1_RS02325
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02325
pseudo: true
so part of: sequence
location: 457087..458258
location: region:457087-458258:1
so has part: feature:457087-458258:1:exon
subclass of: SO_0000010

position:457087:1
position: 457087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458258:1
position: 458258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:457087-458258:1:exon

SGP1_RS02325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02325
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015386837.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: baseplate J/gp47 family protein
SIO_010081: SGP1_RS02325
subclass of: SO_0000673
so part of: SGP1_RS02325
location: 457087..458258
location: region:457087-458258:1
so has part: feature:457087-458258:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:457087-458258:1:exon

SGP1_RS02330
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02330
old locus tag: SG0246
so part of: sequence
location: 458251..458859
location: region:458251-458859:1
so has part: feature:458251-458859:1:exon
subclass of: SO_0000010

position:458251:1
position: 458251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458859:1
position: 458859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458251-458859:1:exon

SGP1_RS02330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02330
old locus tag: SG0246
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001549510.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage tail protein
translation: MPDFYKQLDQLRLPVWMDKGEPARLLRACQAFWRQVYGWLTWPLRQLDATTCAASLLNVLAWQRDISRFDGEPLALFRLRVRYAFINARDAGSVAGFIAIFARLGIGYVEIVERLDGLDWDVARVRLSDGQLAGHPNLLRQIIRQYGRTCRRYQFEVINGTDLHLRAGWVGGDYQCYSAMRPLSPTPPSKKPDVTNDYHPCL
SIO_010081: SGP1_RS02330
subclass of: SO_0000673
so part of: SGP1_RS02330
location: 458251..458859
location: region:458251-458859:1
so has part: feature:458251-458859:1:exon

WP_011410110.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:458251-458859:1:exon

SGP1_RS02335
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02335
pseudo: true
so part of: sequence
location: 458828..>459451
location: region:458828-459451:1
so has part: feature:458828-459451:1:exon
subclass of: SO_0000010

position:458828:1
position: 458828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459451:1
position: 459451
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458828-459451:1:exon

SGP1_RS02335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02335
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006675317.1
note: internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: phage tail protein
SIO_010081: SGP1_RS02335
subclass of: SO_0000673
so part of: SGP1_RS02335
location: 458828..>459451
location: region:458828-459451:1
so has part: feature:458828-459451:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:458828-459451:1:exon

SGP1_RS02340
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02340
so part of: sequence
location: 459522..459746
location: region:459522-459746:1
so has part: feature:459522-459746:1:exon
subclass of: SO_0000010

position:459522:1
position: 459522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459746:1
position: 459746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:459522-459746:1:exon

SGP1_RS02340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02340
inference: COORDINATES: protein motif:HMM:NF024018.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MWLYKDKGGDGVRLNNGNDGGGDWVFNKNGHFYSPQALHAAGATYQEYGNVHGAVWGGHLSGWVEKRIRESSEF
SIO_010081: SGP1_RS02340
subclass of: SO_0000673
so part of: SGP1_RS02340
location: 459522..459746
location: region:459522-459746:1
so has part: feature:459522-459746:1:exon

WP_050747357.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:459522-459746:1:exon

SGP1_RS02350
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02350
old locus tag: SG0247
pseudo: true
so part of: sequence
location: 460082..460456
location: region:460082-460456:1
so has part: feature:460082-460456:1:exon
subclass of: SO_0000010

position:460082:1
position: 460082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460456:1
position: 460456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460082-460456:1:exon

SGP1_RS02350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02350
old locus tag: SG0247
inference: COORDINATES: protein motif:HMM:NF014467.2
GO process: GO:0098004 - virus tail fiber assembly [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: tail fiber assembly protein
SIO_010081: SGP1_RS02350
subclass of: SO_0000673
so part of: SGP1_RS02350
location: 460082..460456
location: region:460082-460456:1
so has part: feature:460082-460456:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:460082-460456:1:exon

SGP1_RS32495
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS32495
so part of: sequence
location: 460855..461163
location: region:460855-461163:1
so has part: feature:460855-461163:1:exon
subclass of: SO_0000010

position:460855:1
position: 460855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461163:1
position: 461163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460855-461163:1:exon

SGP1_RS32495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS32495
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAEAKAEVASGASVAQLQAHLTALSDARQSAHEAISQALGDLGQNSVNAWVFRGEGLAATLAANMQKEVPQPDAVMTLATLFAGDAVSALEAMVHDNHHIGP
SIO_010081: SGP1_RS32495
subclass of: SO_0000673
so part of: SGP1_RS32495
location: 460855..461163
location: region:460855-461163:1
so has part: feature:460855-461163:1:exon

WP_243466149.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:460855-461163:1:exon

SGP1_RS02360
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02360
old locus tag: SG0248
pseudo: true
so part of: sequence
location: 461138..461674
location: region:461138-461674:1
so has part: feature:461138-461674:1:exon
subclass of: SO_0000010

position:461138:1
position: 461138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461674:1
position: 461674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:461138-461674:1:exon

SGP1_RS02360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02360
old locus tag: SG0248
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013575826.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: SGP1_RS02360
subclass of: SO_0000673
so part of: SGP1_RS02360
location: 461138..461674
location: region:461138-461674:1
so has part: feature:461138-461674:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:461138-461674:1:exon

SGP1_RS26405
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS26405
pseudo: true
so part of: sequence
location: 461679..463293
location: region:461679-463293:1
so has part: feature:461679-463293:1:exon
subclass of: SO_0000010

position:461679:1
position: 461679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463293:1
position: 463293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:461679-463293:1:exon

SGP1_RS26405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS26405
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005171191.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: SGP1_RS26405
subclass of: SO_0000673
so part of: SGP1_RS26405
location: 461679..463293
location: region:461679-463293:1
so has part: feature:461679-463293:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:461679-463293:1:exon

SGP1_RS02375
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: arsC
locus tag: SGP1_RS02375
old locus tag: SG0250
so part of: sequence
location: complement(463918..464280)
location: region:463918-464280:-1
so has part: feature:463918-464280:-1:exon
subclass of: SO_0000010

position:463918:-1
position: 463918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464280:-1
position: 464280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:463918-464280:-1:exon

SGP1_RS02375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: arsC
locus tag: SGP1_RS02375
old locus tag: SG0250
EC number: 1.20.4.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011411881.1
GO function: GO:0008794 - arsenate reductase (glutaredoxin) activity [Evidence IEA]
note: This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite, after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell, providing resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: arsenate reductase (glutaredoxin)
translation: MKNVTIYHNPSCGTSRNTLTLIRDSGIEPTIIPYLKQPPSPEQLLELLSVMGMHARELLRSKEAQYRQLGLDAQHLSEDELIQAMCHHPVLMNRPIVVTPLGTRLCRPAEIVLEILPKVQ
SIO_010081: SGP1_RS02375
subclass of: SO_0000673
so part of: SGP1_RS02375
location: complement(463918..464280)
location: region:463918-464280:-1
so has part: feature:463918-464280:-1:exon

WP_011410114.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:463918-464280:-1:exon

SGP1_RS02380
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02380
old locus tag: SGtRNA69
so part of: sequence
location: complement(464687..464762)
location: region:464687-464762:-1
so has part: feature:464687-464762:-1:exon
subclass of: SO_0000663

position:464687:-1
position: 464687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464762:-1
position: 464762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464687-464762:-1:exon

SGP1_RS02380
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 343509
locus tag: SGP1_RS02380
old locus tag: SGtRNA69
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(464727..464729),aa:Ile,seq:cat)
SIO_010081: SGP1_RS02380
subclass of: SO_0000673
so part of: SGP1_RS02380
location: complement(464687..464762)
location: region:464687-464762:-1
so has part: feature:464687-464762:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:464687-464762:-1:exon

SGP1_RS02385
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02385
pseudo: true
so part of: sequence
location: 464925..465346
location: region:464925-465346:1
so has part: feature:464925-465346:1:exon
subclass of: SO_0000010

position:464925:1
position: 464925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465346:1
position: 465346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464925-465346:1:exon

SGP1_RS02385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02385
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010283006.1
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: double-stranded uracil-DNA glycosylase
SIO_010081: SGP1_RS02385
subclass of: SO_0000673
so part of: SGP1_RS02385
location: 464925..465346
location: region:464925-465346:1
so has part: feature:464925-465346:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:464925-465346:1:exon

SGP1_RS02390
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: rpoD
locus tag: SGP1_RS02390
old locus tag: SG0251
so part of: sequence
location: complement(465455..467302)
location: region:465455-467302:-1
so has part: feature:465455-467302:-1:exon
subclass of: SO_0000010

position:465455:-1
position: 465455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:467302:-1
position: 467302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465455-467302:-1:exon

SGP1_RS02390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: rpoD
locus tag: SGP1_RS02390
old locus tag: SG0251
inference: COORDINATES: similar to AA sequence:RefSeq:NP_311977.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA polymerase sigma factor RpoD
translation: MEQNPQSQLKLLVTRGKEQGYLTFAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVMEEAPDADDLLLAETTSDTDEDAAEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEIDIAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAGEARLSDLITGFVDPNAEEDMAPTATHIGSELSADEIADDDDEDEEDGDDDSTDDDNSIDPELARQKFVELREQYEITRNVIKTNGRSHAKSASEILNLSDVFKQFRLVPKQFDYLVNNMRAMMDRVRTQERLIMKLCVEISKMPKKNFVTLFAGNETSESWFKAALAMNKPWSEKLHEVDDDVYRSLQKLRQIEEETGLTIEQVKDINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPTPEELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATSESLRSATHDVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEVLRSFLDD
SIO_010081: SGP1_RS02390
subclass of: SO_0000673
so part of: SGP1_RS02390
location: complement(465455..467302)
location: region:465455-467302:-1
so has part: feature:465455-467302:-1:exon

WP_011410115.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:465455-467302:-1:exon

SGP1_RS02395
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: dnaG
locus tag: SGP1_RS02395
old locus tag: SG0252
so part of: sequence
location: complement(467454..469202)
location: region:467454-469202:-1
so has part: feature:467454-469202:-1:exon
subclass of: SO_0000010

position:467454:-1
position: 467454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:469202:-1
position: 469202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:467454-469202:-1:exon

SGP1_RS02395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: dnaG
locus tag: SGP1_RS02395
old locus tag: SG0252
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014333815.1
GO function: GO:0003896 - DNA primase activity [Evidence IEA]
GO process: GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA primase
translation: MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHHEKTPSFTVNGEKQFYHCFGCGTHGNAIDFLMNYDRLEFVESIEELAAQHGLDVPYETGTGPNQQKRHQRQSLYQLMDKLSGFYQQALQAQTASDARHYLQQRGLSEAVINHFAIGFAPPGWDNVDKRFGRSAEDRASLNDAGMLVVNDNGRTYDRFRDRIMFPIRDKRGRVIAFGGRILGEGQPKYLNSPETDIFHKGRQLYGLYEAQRQHPELSRLLVVEGYMDVVALAQFGIDYAVASLGTSTTAEHIQLLYRATDRVICCYDGDRAGREAAWRALENALPYLTDGRQLRFMFLPDGEDPDTLVRKIGKEAFEKYIEQAQPLSTFLFETLMPQVDLSSPDGRAKLSTLALPLIGQVPGETLRLYLRQQLGNKLGILDDSQLEKLLPKAALKANISPQSRIKRTTMRILIGLLVQHPRLSALVPTVQGLEQAIQPGVPLFVELVQTCQAQPGLTTGQLLEHYRENKSYSQLETLATWNHMIIDEMIEATFVDTLASLYDSILEHRQEALIARDRTHGLTAEERQELWSLNQALAKKT
SIO_010081: SGP1_RS02395
subclass of: SO_0000673
so part of: SGP1_RS02395
location: complement(467454..469202)
location: region:467454-469202:-1
so has part: feature:467454-469202:-1:exon

WP_011410116.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:467454-469202:-1:exon

SGP1_RS02400
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: rpsU
locus tag: SGP1_RS02400
old locus tag: SG0253
so part of: sequence
location: complement(469332..469547)
location: region:469332-469547:-1
so has part: feature:469332-469547:-1:exon
subclass of: SO_0000010

position:469332:-1
position: 469332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:469547:-1
position: 469547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469332-469547:-1:exon

SGP1_RS02400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: rpsU
locus tag: SGP1_RS02400
old locus tag: SG0253
inference: COORDINATES: similar to AA sequence:RefSeq:NP_311975.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S21
translation: MPVIKVRENEPFDVALRRFKRSCEKAGVLAEVRRREFYEKPTTERKRAKASAVKRHAKKLARENARRTRLY
SIO_010081: SGP1_RS02400
subclass of: SO_0000673
so part of: SGP1_RS02400
location: complement(469332..469547)
location: region:469332-469547:-1
so has part: feature:469332-469547:-1:exon

WP_001144069.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:469332-469547:-1:exon

SGP1_RS02410
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: tsaD
locus tag: SGP1_RS02410
old locus tag: SG0254
so part of: sequence
location: 469998..471017
location: region:469998-471017:1
so has part: feature:469998-471017:1:exon
subclass of: SO_0000010

position:469998:1
position: 469998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:471017:1
position: 471017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469998-471017:1:exon

SGP1_RS02410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: tsaD
locus tag: SGP1_RS02410
old locus tag: SG0254
EC number: 2.3.1.234
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410117.1
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
translation: MRVLGIETSCDETGVAIYDQQQGLLANQLYSQVKLHADYGGVVPELASRDHVHKTVPLIQAALAEAGLQASDIHGVAYTAGPGLVGALMVGATVGRALAYAWGVPAVAVHHMEGHLLAPMLEANPPAFPFVALLVSGGHTQLIAVTGIGEYQLLGESIDDAAGEAFDKTAKLLGLDYPGGPMLARLAQQGVPGRYKFPRPMTDHPGLAFSFSGLKTFAANTVRAGADDHQTRADVARAFEEAVVDTLMIKCRRALDQTRFQRLVMAGGVSANQSLRASMGEMMRQRGGEVFYARPEFCTDNGAMIAYAGMVRLQGGSQASLAVSVRPRWPLEELPALGA
SIO_010081: SGP1_RS02410
subclass of: SO_0000673
so part of: SGP1_RS02410
location: 469998..471017
location: region:469998-471017:1
so has part: feature:469998-471017:1:exon

WP_011410117.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:469998-471017:1:exon

SGP1_RS02415
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: plsY
locus tag: SGP1_RS02415
old locus tag: SG0255
so part of: sequence
location: complement(471019..471648)
location: region:471019-471648:-1
so has part: feature:471019-471648:-1:exon
subclass of: SO_0000010

position:471019:-1
position: 471019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471648:-1
position: 471648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471019-471648:-1:exon

SGP1_RS02415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: plsY
locus tag: SGP1_RS02415
old locus tag: SG0255
EC number: 2.3.1.15
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410118.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0008374 - O-acyltransferase activity [Evidence IEA]
GO process: GO:0006654 - phosphatidic acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycerol-3-phosphate 1-O-acyltransferase PlsY
translation: MNAIAIGMIIFAYLCGSVSNAILICRLARLPDPRTSGSGNPGATNVLRLGGKLAAAGVMVFDVLKGMIPVWIGYGLGLPPFWLGLVAIAACLGHIYPIFFHFRGGKGVATALGAIAPIGYDLSGLMIGTWLLTALLSGYSSLGAIVSALIAPFYVWWFKPQFTFPVAMLSCLVLLRHHDNIQRLWHGQESRIWHRRQKDRDIDRQQSKH
SIO_010081: SGP1_RS02415
subclass of: SO_0000673
so part of: SGP1_RS02415
location: complement(471019..471648)
location: region:471019-471648:-1
so has part: feature:471019-471648:-1:exon

WP_011410118.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:471019-471648:-1:exon

SGP1_RS02420
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: folB
locus tag: SGP1_RS02420
old locus tag: SG0256
so part of: sequence
location: 471754..472113
location: region:471754-472113:1
so has part: feature:471754-472113:1:exon
subclass of: SO_0000010

position:471754:1
position: 471754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472113:1
position: 472113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471754-472113:1:exon

SGP1_RS02420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: folB
locus tag: SGP1_RS02420
old locus tag: SG0256
EC number: 4.1.2.25
EC number: 5.1.99.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015962952.1
GO function: GO:0004150 - dihydroneopterin aldolase activity [Evidence IEA]
GO process: GO:0006760 - folic acid-containing compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase
translation: MDIVFIEQLTVMAVIGVYDWEQQRLQKLVFDLEMGWDNRPAARSDDVADCLSYADVTDAVLSLVSGKHFALVERVAEETAERLMTQFKLPWIRIKIGKPGAVPQAANVGVIIERMRRKI
SIO_010081: SGP1_RS02420
subclass of: SO_0000673
so part of: SGP1_RS02420
location: 471754..472113
location: region:471754-472113:1
so has part: feature:471754-472113:1:exon

WP_011410119.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:471754-472113:1:exon

SGP1_RS02425
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: bacA
locus tag: SGP1_RS02425
old locus tag: SG0257
so part of: sequence
location: 472254..473075
location: region:472254-473075:1
so has part: feature:472254-473075:1:exon
subclass of: SO_0000010

position:472254:1
position: 472254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473075:1
position: 473075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472254-473075:1:exon

SGP1_RS02425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: bacA
locus tag: SGP1_RS02425
old locus tag: SG0257
EC number: 3.6.1.27
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410120.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0050380 - undecaprenyl-diphosphatase activity [Evidence IEA]
GO process: GO:0016311 - dephosphorylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: undecaprenyl-diphosphate phosphatase
translation: MADMHEWVIAFILGGVEGLTEFLPVSSTGHMILVGSLLGFTDDKAKTFEVIIQLGSILAVVVVFWRRLFGLIGIHFGQVPHEGIGSGRLRLGHILLGMIPAVVLGLVFHEQIKAIFAPIYVMYALVVGGVLLLAGEWLKPKVPRAAGIDDLTYLQAFLIGCFQCLALWPGFSRSGATISGGLLVGVSRYAASEFSFILAVPMMLGATVLDLYKSLPFLSWQDLPMFAIGFVTAFVVALLAIKFFLQIIKRISFVPFAIYRFILAVVVYWILIG
SIO_010081: SGP1_RS02425
subclass of: SO_0000673
so part of: SGP1_RS02425
location: 472254..473075
location: region:472254-473075:1
so has part: feature:472254-473075:1:exon

WP_011410120.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:472254-473075:1:exon

SGP1_RS02430
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02430
old locus tag: SG0258
so part of: sequence
location: complement(473230..474477)
location: region:473230-474477:-1
so has part: feature:473230-474477:-1:exon
subclass of: SO_0000010

position:473230:-1
position: 473230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:474477:-1
position: 474477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473230-474477:-1:exon

SGP1_RS02430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02430
old locus tag: SG0258
EC number: 2.7.7.72
EC number: 3.1.3.-
EC number: 3.1.4.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410121.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004810 - CCA tRNA nucleotidyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0001680 - tRNA 3'-terminal CCA addition [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: multifunctional CCA addition/repair protein
translation: MKKYLVGGAVRDGLLQLPVKERDWVVVGATPQEMLAQGYQHVGKDFPVFLHPDSREEYALARTERKSGQGYTGFICYASPEVTLEEDLRRRDLTINAIARDDEGNLIDPYQGQQDIRQRWLRHVSDAFGEDPLRVLRVARFAARFAHLNFRIAPETMALMQQMTDELPLLAPERVWKETERTLATRNPQVYFQVLRDCGALKALFPEVDALFGVPAPAKWHPEIDTGIHTLMTVSMAARLTDDIAVRFATLCHDVGKALTPRELWPSHHGHGPAGVKVVEALCQRLKVPNPLRDLATIVARYHDLLHGAQSLTPKTLIKLFSAIDVWRRPARLEQMILASEADARGRTGFENHAYPQGDFLRDAFRVASSVSARDVMAAGFSGAQIGEELNRRRQQALASWKRQQENSDTETIQD
SIO_010081: SGP1_RS02430
subclass of: SO_0000673
so part of: SGP1_RS02430
location: complement(473230..474477)
location: region:473230-474477:-1
so has part: feature:473230-474477:-1:exon

WP_011410121.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:473230-474477:-1:exon

SGP1_RS02435
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02435
old locus tag: SG0259
so part of: sequence
location: complement(474578..475198)
location: region:474578-475198:-1
so has part: feature:474578-475198:-1:exon
subclass of: SO_0000010

position:474578:-1
position: 474578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475198:-1
position: 475198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:474578-475198:-1:exon

SGP1_RS02435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02435
old locus tag: SG0259
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008806527.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TIGR04211 family SH3 domain-containing protein
translation: MLKLRHIYFVAVGLGLACAANADEPRYVSDNLLTYIHSGPGNQYRIVGTLNSGDTVTLLCQNDDTGFAQVRDEKGRTAWIPQEQLSAQPSLRTRVPALEQQVQDLTQKLNTIDASWNQRTADMQKKVATSDGVINDLKEQNQALKDQLSTAQKKVNAAAVQLDDKQRTIIMQWFMYGGGVAGVGLLLGLLLPHIIPRRKRDNCWMN
SIO_010081: SGP1_RS02435
subclass of: SO_0000673
so part of: SGP1_RS02435
location: complement(474578..475198)
location: region:474578-475198:-1
so has part: feature:474578-475198:-1:exon

WP_011410122.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:474578-475198:-1:exon

SGP1_RS02440
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02440
so part of: sequence
location: 475603..476004
location: region:475603-476004:1
so has part: feature:475603-476004:1:exon
subclass of: SO_0000010

position:475603:1
position: 475603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476004:1
position: 476004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:475603-476004:1:exon

SGP1_RS02440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02440
inference: COORDINATES: protein motif:HMM:NF014038.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CYTH domain-containing protein
translation: MNEEIKLKFIVQPEMLPALRQRLLAMGHDGNALRQLTNTYFETDGFDLRRHGIGLRIRQVDGQCEMTMKTAGQVIGGLHQHPEFNVPLSGPTLDLARLPAQTWPPELDPAAQATVEEGMSAALHMALDHWQYH
SIO_010081: SGP1_RS02440
subclass of: SO_0000673
so part of: SGP1_RS02440
location: 475603..476004
location: region:475603-476004:1
so has part: feature:475603-476004:1:exon

WP_050747360.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:475603-476004:1:exon

SGP1_RS23180
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS23180
so part of: sequence
location: 476010..476252
location: region:476010-476252:1
so has part: feature:476010-476252:1:exon
subclass of: SO_0000010

position:476010:1
position: 476010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476252:1
position: 476252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476010-476252:1:exon

SGP1_RS23180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS23180
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVVRACAGQGRRAGESGQPQSQLRGLLADIVPLIGAYRPTEVVAYLMHWTALHQSIVQPGSDDREHLRRQELAQVGFWLK
SIO_010081: SGP1_RS23180
subclass of: SO_0000673
so part of: SGP1_RS23180
location: 476010..476252
location: region:476010-476252:1
so has part: feature:476010-476252:1:exon

WP_050747361.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:476010-476252:1:exon

SGP1_RS02445
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: glnE
locus tag: SGP1_RS02445
old locus tag: SG0260
so part of: sequence
location: 476313..479126
location: region:476313-479126:1
so has part: feature:476313-479126:1:exon
subclass of: SO_0000010

position:476313:1
position: 476313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479126:1
position: 479126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476313-479126:1:exon

SGP1_RS02445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: glnE
locus tag: SGP1_RS02445
old locus tag: SG0260
EC number: 2.7.7.42
EC number: 2.7.7.89
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012764461.1
GO function: GO:0008882 - [glutamate-ammonia-ligase] adenylyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase
translation: MNARPLPPLLHKQGQQSAAGLPAPADDATLRALAMSDFISDALQSHPAWQQALVTEVPQPGEWRDYAALLAARLAAVDDESALMRELRLFRRRMLVRIGWAQILGLCDTRETLTQLSQLAETLIIAARDWLWQACCREWGTPCGADGTPQPLLILGMGKLGGGELNFSSDIDLIFAYPENGFTRGGGRELDNAQFFIRLGQRVIKALDQPTVDGFVYRVDMRLRPFGDSGQLVLSFAALEDYYQEQGRDWERYAMIKARLMGGDGDPYSQELRSMLRPFIYRRYIDFSVIQSLRNMKQMIAREVRRRGLKDNIKLGAGGIREIEFIAQVFQLIRGGREPRLQSRALLPTLETIGALGLLTPAQSARLSAAYLYLRRLENLLQGINDQQTQTLPADALNQARLAWGMDEADWPQLTRTLDAHMQAVRAVFDELIGDDAPDAEDNDTPGPAVVLWQEPMSQATEVDGEGVPWPRLAQYVADFRRDVAKRTLGPRGREVLDALMPRLLAHIGERDAADEAFARLAPVLLSIVSRTTYLELLLEYPGALGLLTRLCAVSPMIASQLARHPLLLDELLDPATLYHPPAPAAYGDELRQYLLRVPEEDEEQQLEALRQFKQAQQLRIAAADIAGVLPVMKVSDHLTYLAEAMIQAVIRQAWKSMVVRHGRPSHLHDGQDAGFAVIGYGKLGGWELGYSSDLDLVFLHQCPDDAVTDGPCVIDGRQFYLRLAQRVMHLFSIRTPAGVLYEVDARLRPSGAAGMLVSTLSAFEDYQLNEAWTWEHQALVRARMVYGSPELQEGFNTIRRRVLCLPRDPATLRREVSEMRAKMRQHLASKQTDVFDIKTDEGGITDIEFLAQYLVLRYAAEKPELTRWSDNVRLFELVAREGIMDGDDADGLRASYTTLRDTLHHLALQALPGRVPEAQFARERALIVRCWRQWLD
SIO_010081: SGP1_RS02445
subclass of: SO_0000673
so part of: SGP1_RS02445
location: 476313..479126
location: region:476313-479126:1
so has part: feature:476313-479126:1:exon

WP_011410123.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:476313-479126:1:exon

SGP1_RS02450
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: hldE
locus tag: SGP1_RS02450
old locus tag: SG0261
so part of: sequence
location: 479305..480750
location: region:479305-480750:1
so has part: feature:479305-480750:1:exon
subclass of: SO_0000010

position:479305:1
position: 479305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480750:1
position: 480750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:479305-480750:1:exon

SGP1_RS02450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: hldE
locus tag: SGP1_RS02450
old locus tag: SG0261
EC number: 2.7.1.167
EC number: 2.7.7.70
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410124.1
GO function: GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
GO process: GO:0009058 - biosynthetic process [Evidence IEA]; GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE
translation: MKVTLPDFRRAGVLVVGDVMLDRYWYGPTSRISPEAPVPIVKVDAIEERPGGAANVAMNIAALGCHSRLVGLTGIDDAARALGARLSEVDVTCDFVAVATHPTVTKLRVLSRNQQLIRLDFEQGFDDVDAAPMIERIQLALPKTGALVLSDYAKGALARVREMITLARAAGVPVLVDPKGTDFDRYRGATLLTPNLSEFEAVAGPCKDEETLVSRGMKLIADYQLSALLITRSEQGMTLLQPGKDPLHLPTQAQEVYDVTGAGDTVIGVLAAALAAGNSLEDSCFLANAAAGVVVGKLGTSTVSPIELENAIRGRAETGFGVMTESELKQAVAVARQRGEKVVMTNGIFDILHAGHVSYLANAQRLGDRLIVAVNSDESTKRLKGESRPVNPLAQRMTVLAALEAVDWVVPFSEDTPQRLIADVLPDVLVKGGDYQPHQIAGSKEVWDNGGDVLVLNFEDGCSTTNIINAIKRRAGQRTVV
SIO_010081: SGP1_RS02450
subclass of: SO_0000673
so part of: SGP1_RS02450
location: 479305..480750
location: region:479305-480750:1
so has part: feature:479305-480750:1:exon

WP_011410124.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:479305-480750:1:exon

SGP1_RS02455
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02455
old locus tag: SG0262
so part of: sequence
location: complement(480997..481293)
location: region:480997-481293:-1
so has part: feature:480997-481293:-1:exon
subclass of: SO_0000010

position:480997:-1
position: 480997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481293:-1
position: 481293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:480997-481293:-1:exon

SGP1_RS02455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02455
old locus tag: SG0262
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017145410.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: accessory factor UbiK family protein
translation: MIDPKKLEQLARQVQESLPKGIRDLGDDVEKKIRQLLQNQFSRMDLVSREEFDVQTQVLLRTREKLSQLELRLNALETMPKSDPVVSPATPAGGARGG
SIO_010081: SGP1_RS02455
subclass of: SO_0000673
so part of: SGP1_RS02455
location: complement(480997..481293)
location: region:480997-481293:-1
so has part: feature:480997-481293:-1:exon

WP_011410125.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:480997-481293:-1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 343509
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00050
inference: COORDINATES: profile:INFERNAL:1.1.4
note: FMN riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: flavin mononucleotide
so part of: sequence
location: 481423..481583
location: region:481423-481583:1
so has part: feature:481423-481583:1:region

position:481423:1
position: 481423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481583:1
position: 481583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:481423-481583:1:region

SGP1_RS02460
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: ribB
locus tag: SGP1_RS02460
old locus tag: SG0263
so part of: sequence
location: 481694..482347
location: region:481694-482347:1
so has part: feature:481694-482347:1:exon
subclass of: SO_0000010

position:481694:1
position: 481694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:482347:1
position: 482347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:481694-482347:1:exon

SGP1_RS02460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: ribB
locus tag: SGP1_RS02460
old locus tag: SG0263
EC number: 4.1.99.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013316626.1
GO function: GO:0008686 - 3,4-dihydroxy-2-butanone-4-phosphate synthase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3,4-dihydroxy-2-butanone-4-phosphate synthase
translation: MNQTLLSEFGSPSQRVENALESLRNGRGVLVLDDEDRENEGDMIFAAQNMTVEQMALTIRYGSGIVCLCLTEERRQQLALPMMVERNSSHYQTAFTVTIEAAEGVSTGVSAADRLTTIRAAIKDNAKPTDLNRPGHVFPLCAQPGGVLVRGGHTEAAVDLTTLAGLKPAGVLCEVTNDDGSMAHAPEIIAFGRRHNMPVLTIEDLVAYRRALMREVS
SIO_010081: SGP1_RS02460
subclass of: SO_0000673
so part of: SGP1_RS02460
location: 481694..482347
location: region:481694-482347:1
so has part: feature:481694-482347:1:exon

WP_011410126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:481694-482347:1:exon

SGP1_RS02465
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02465
so part of: sequence
location: 483091..483597
location: region:483091-483597:1
so has part: feature:483091-483597:1:exon
subclass of: SO_0000010

position:483091:1
position: 483091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:483597:1
position: 483597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:483091-483597:1:exon

SGP1_RS02465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02465
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002212189.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dioxygenase
translation: MSSPRMPALFLGHGSPMNVLEDNRYTRSWQQLGQTLPWPEAILAISAHWYRQGTAVTAVAQPRTVHDFGGFPQALFDQRYLAPGSPALAQRGQSLLAPVPVQADIDEWEPHPLIAYQQHQDAALANPSPEHFLPLLYVLGSRIGDEPVSVPVDGITLGYISMLSVQVG
SIO_010081: SGP1_RS02465
subclass of: SO_0000673
so part of: SGP1_RS02465
location: 483091..483597
location: region:483091-483597:1
so has part: feature:483091-483597:1:exon

WP_041866569.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:483091-483597:1:exon

SGP1_RS02470
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02470
old locus tag: SG0264
so part of: sequence
location: complement(483635..484795)
location: region:483635-484795:-1
so has part: feature:483635-484795:-1:exon
subclass of: SO_0000010

position:483635:-1
position: 483635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:484795:-1
position: 484795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:483635-484795:-1:exon

SGP1_RS02470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02470
old locus tag: SG0264
EC number: 6.3.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014913883.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutathionylspermidine synthase family protein
translation: MKRVTIDERPDWREKATEYGFNFHTLYGEPYWCEDAYYQFTLAQIETLEEATADLHQMCLQVVEKVVASDELMTKFRIPRHTWSFVRNAWQTRQPSLYSRLDLVYDGQHPPKLLENNADTPTSLYEAAFFQWIWLEDQINAGKLPTNADQYNSLQEKLIARFAELQSQHGFSLLHLACCQDTEEDRGTVQYLQDCATEAGLPNTFLYIEELGLGEKGQFTDMQDQVISNLFKLYPWEFMLREMFSTKLEDAGVRWLEPAWKCILSNKALLPMLWQMFPDHPNLLPAYFAEDDYPPMDNYVVKPLFSREGANVRVFEQGRETARVDGPYGEEGSIVQAFCPLPRFGDSYTVIGSWLVNDEPCGIGLREDRQIITQDLSRFCPHIILD
SIO_010081: SGP1_RS02470
subclass of: SO_0000673
so part of: SGP1_RS02470
location: complement(483635..484795)
location: region:483635-484795:-1
so has part: feature:483635-484795:-1:exon

WP_011410127.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:483635-484795:-1:exon

SGP1_RS02475
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02475
old locus tag: SG0265
so part of: sequence
location: complement(484802..485449)
location: region:484802-485449:-1
so has part: feature:484802-485449:-1:exon
subclass of: SO_0000010

position:484802:-1
position: 484802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485449:-1
position: 485449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:484802-485449:-1:exon

SGP1_RS02475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02475
old locus tag: SG0265
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012146973.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1190 family protein
translation: MKRTKQINHASFRKHWRAYRMAPVALAVGAVFVLAGCEKSDENVSLYMNSDDCARANPSLSEQCTTAYNAAQQEAVKTAPKYASRADCVAEFGEEQCTQVPAQAGMAAESQHSGSMWMPLMAGYMMGRMMVGGYSQQPLFTSLAANSPARGQFVDARGRNYGASTSGRSMTVPKTALAPKPATTQTITRGGFGETVAKQNALRSSSATPHRTMGG
SIO_010081: SGP1_RS02475
subclass of: SO_0000673
so part of: SGP1_RS02475
location: complement(484802..485449)
location: region:484802-485449:-1
so has part: feature:484802-485449:-1:exon

WP_011410128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:484802-485449:-1:exon

SGP1_RS02480
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: tolC
locus tag: SGP1_RS02480
old locus tag: SG0266
so part of: sequence
location: complement(485666..487177)
location: region:485666-487177:-1
so has part: feature:485666-487177:-1:exon
subclass of: SO_0000010

position:485666:-1
position: 485666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487177:-1
position: 487177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485666-487177:-1:exon

SGP1_RS02480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: tolC
locus tag: SGP1_RS02480
old locus tag: SG0266
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015695859.1
GO function: GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane channel protein TolC
translation: MKKLLPLLIGLSLGSFSAMSQAENLLQVYQQARSSNPDLRRSAADRDAAFEKINEQRAPLLPQLGLGVDYTYTQGFRDNRDINSNESSTALQLTQTIFDMSKWRALTLQEKTAGIQDVSYQTDQQSLIINTATAYFNVLNAIDTLSYTEAQKQALYRQLDQTTQRFNVGLVAITDVQNARSEYDTVLASEVRAHNDLDNALEALRQITGMEYPQLATLNIASFKTQHPDAITSLLKEAENRNLSLLSARLSQDLAREDIRYYQAGHLPTLDLNASSTVSNSDYNGSRNNSVTNPNKHIGGNAIGLSLNVPLYSGGSVTSQVKQAQYSFVSASEQLESVHRSMVMTLRSSFNNISASISSIAAYEQAVVSAQSSLDASEAGYQVGTRTIVDVLDATTTLYDRKRNLSQARYQYLINQLNLKYALGTLNETDLVTLNNTLGKTVPTDPQTVAPENASQDARADGTGTTSPGASAAQTAFQPRAASVTTAPATGTGRTSGRNRFQH
SIO_010081: SGP1_RS02480
subclass of: SO_0000673
so part of: SGP1_RS02480
location: complement(485666..487177)
location: region:485666-487177:-1
so has part: feature:485666-487177:-1:exon

WP_011410129.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:485666-487177:-1:exon

SGP1_RS02485
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: nudF
locus tag: SGP1_RS02485
old locus tag: SG0267
so part of: sequence
location: 487382..487948
location: region:487382-487948:1
so has part: feature:487382-487948:1:exon
subclass of: SO_0000010

position:487382:1
position: 487382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:487948:1
position: 487948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:487382-487948:1:exon

SGP1_RS02485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: nudF
locus tag: SGP1_RS02485
old locus tag: SG0267
EC number: 3.6.1.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010297426.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ADP-ribose diphosphatase
translation: MTSSFVTPVIFGGDDVEMLSRETLYDGFFKMELYHFRHRLFNGGMSQMVTREIFERGHAVVLLPYDARRDQVILLEQIRIAAYDSSPTPWLLEQVARREAVEETGLTVGRCKRMLSYLASPGGTSECLTVMVGEVDALKAEGIHGLVEENEDIRLHAVSREQAYRWVEEGVIDNAASVIALQWLALHH
SIO_010081: SGP1_RS02485
subclass of: SO_0000673
so part of: SGP1_RS02485
location: 487382..487948
location: region:487382-487948:1
so has part: feature:487382-487948:1:exon

WP_011410130.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:487382-487948:1:exon

SGP1_RS02490
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02490
old locus tag: SG0268
so part of: sequence
location: 487975..488400
location: region:487975-488400:1
so has part: feature:487975-488400:1:exon
subclass of: SO_0000010

position:487975:1
position: 487975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:488400:1
position: 488400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:487975-488400:1:exon

SGP1_RS02490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02490
old locus tag: SG0268
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004948286.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1249 family protein
translation: MMKRYTSDFPEMMRLCETNFAQLRRLLPPINEVGETVAYQVHGASYRLTIQESTRYTTLVEITQTAPVASYWSLPSMTVRLYHDAMVAEVCSSQQISRFKARYDYPNKKLHQRDEKHQINQFLADWLRYCLAYGAMSVPVC
SIO_010081: SGP1_RS02490
subclass of: SO_0000673
so part of: SGP1_RS02490
location: 487975..488400
location: region:487975-488400:1
so has part: feature:487975-488400:1:exon

WP_011410131.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:487975-488400:1:exon

SGP1_RS02495
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: cpdA
locus tag: SGP1_RS02495
old locus tag: SG0269
so part of: sequence
location: 488428..489255
location: region:488428-489255:1
so has part: feature:488428-489255:1:exon
subclass of: SO_0000010

position:488428:1
position: 488428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:489255:1
position: 489255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:488428-489255:1:exon

SGP1_RS02495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: cpdA
locus tag: SGP1_RS02495
old locus tag: SG0269
EC number: 3.1.4.53
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005975549.1
GO function: GO:0004115 - 3',5'-cyclic-AMP phosphodiesterase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3',5'-cyclic-AMP phosphodiesterase
translation: MESLLKLPVARGANIRILQITDTHLFAGEDETLLGVKTFRSYSAVLKAVQAEQRHFDLVVATGDLAQDHSPQAYRHFAAGIARLPAPCVWLPGNHDFQPAMVDVLAECGISCAKQVLIGDEWQLLLLDSQVYGVPHGELSDYQLEWLARALASQPERHTLLLLHHHPFPSGCIWLDQHSLRNAHMLAEVLQPHQRVKTLLCGHIHQELDVDWLGRRVLATPSTCVQFKPHCTNFTIDTLGPGWRYLDLLPGGLLQTEVHRLDGAEHQPDTDYEGY
SIO_010081: SGP1_RS02495
subclass of: SO_0000673
so part of: SGP1_RS02495
location: 488428..489255
location: region:488428-489255:1
so has part: feature:488428-489255:1:exon

WP_011410132.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:488428-489255:1:exon

SGP1_RS02500
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: yqiA
locus tag: SGP1_RS02500
old locus tag: SG0270
so part of: sequence
location: 489255..489836
location: region:489255-489836:1
so has part: feature:489255-489836:1:exon
subclass of: SO_0000010

position:489836:1
position: 489836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489255-489836:1:exon

SGP1_RS02500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: yqiA
locus tag: SGP1_RS02500
old locus tag: SG0270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012883076.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: esterase YqiA
translation: MATLLYLHGFNSSPLSAKANALGAWLARHHPEIELLVPQLPVYPADAAEMMETLVMERAGETLGLVGSSLGGYFATWLSQSFLLPAVVVNPAVRPFDLLTGYLGENLNPFTGETYVLAPRHIYDLKVMQIDVLESPDLIWLLAQSCDEILDYRQAVAYYTHCRQTVESGGNHAFVGFDHYFSSIVHFLRLTVG
SIO_010081: SGP1_RS02500
subclass of: SO_0000673
so part of: SGP1_RS02500
location: 489255..489836
location: region:489255-489836:1
so has part: feature:489255-489836:1:exon

WP_011410133.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:489255-489836:1:exon

SGP1_RS02505
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: parE
locus tag: SGP1_RS02505
old locus tag: SG0271
so part of: sequence
location: 489931..491826
location: region:489931-491826:1
so has part: feature:489931-491826:1:exon
subclass of: SO_0000010

position:489931:1
position: 489931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491826:1
position: 491826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489931-491826:1:exon

SGP1_RS02505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: parE
locus tag: SGP1_RS02505
old locus tag: SG0271
EC number: 5.6.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016257886.1
GO component: GO:0009340 - DNA topoisomerase IV complex [Evidence IEA]
GO function: GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA topoisomerase IV subunit B
translation: MTQSSYNADAIEVLSGLEPVRRRPGMYTDTLRPNHLGQEVIDNSVDEALAGHARRIDVILHPDQSLEVTDDGRGMPVDIHPEEGVPAVELILCRLHAGGKFSNKNYQFSGGLHGVGISVVNALSTRVEVTVRRNGNVYRIAFENGDKVEDLSVVGTCPKRNTGTSVHFWPDEHFFDSPRFSVSRLTHLLKAKAVLCPGVEIVFQDRVNNTEQRWCYEAGLTDYLNEAINGLITLPETPFVGAVSGDTETVDWVLLWLPEGGELLTESYVNLIPTPQGGTHVNGLRQGLLDAMREFCEYRNILPRGVKLSADDIWERCTYVLSVKMQDPQFAGQTKERLSSRQSAAFVSGVVKDAFILWLNQNIQVAEQLAELAIASAQRRLRAAKKVVRKKLTSGPALPGKLADCTAQDLVRTELFLVEGDSAGGSAKQARDREYQAIMPLKGKILNTWEVSSDEVLASQEVHDISVALGIDPDSNDLSQLRYGKICILADADSDGLHIATLLCALFMQHFRKLVEEGHVYVAMPPLYRIDLGKEVYYALDEEEKTGVLEQLKRKKGKPNVQRFKGLGEMNPLQLRETTLDPNTRRLVQLTVGADDVQQTLAMMDMLLAKKRSEDRRNWLQEKGDEAEIEV
SIO_010081: SGP1_RS02505
subclass of: SO_0000673
so part of: SGP1_RS02505
location: 489931..491826
location: region:489931-491826:1
so has part: feature:489931-491826:1:exon

WP_011410134.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:489931-491826:1:exon

SGP1_RS02515
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02515
old locus tag: SG0272
so part of: sequence
location: 492210..492812
location: region:492210-492812:1
so has part: feature:492210-492812:1:exon
subclass of: SO_0000010

position:492210:1
position: 492210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492812:1
position: 492812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492210-492812:1:exon

SGP1_RS02515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02515
old locus tag: SG0272
EC number: 4.2.1.109
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410135.1
GO function: GO:0046872 - metal ion binding [Evidence IEA]
GO process: GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methylthioribulose 1-phosphate dehydratase
translation: MQLAELVAACRWIGAKGWSPATGGNMSQRRDVHSCYITESGLDKGHLDAGDFLTVDIQTGAAQPGRRPSAETGLHTFLYRRFPEVGCVLHTHSVSATVLSRAEQGSTLRLSGYEMQKSLTGQTDHREEVAIAVFDNSQDIPALVQRIALQDALTPLRYGFLMCGHGLTCWGRDVREARLHLEGLEFLFECEWRRRLLEAQ
SIO_010081: SGP1_RS02515
subclass of: SO_0000673
so part of: SGP1_RS02515
location: 492210..492812
location: region:492210-492812:1
so has part: feature:492210-492812:1:exon

WP_011410135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:492210-492812:1:exon

SGP1_RS02520
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02520
pseudo: true
so part of: sequence
location: 492809..493432
location: region:492809-493432:1
so has part: feature:492809-493432:1:exon
subclass of: SO_0000010

position:492809:1
position: 492809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:493432:1
position: 493432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492809-493432:1:exon

SGP1_RS02520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02520
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016928998.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: acireductone synthase
SIO_010081: SGP1_RS02520
subclass of: SO_0000673
so part of: SGP1_RS02520
location: 492809..493432
location: region:492809-493432:1
so has part: feature:492809-493432:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:492809-493432:1:exon

SGP1_RS02525
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02525
old locus tag: SG0273
so part of: sequence
location: 493432..493977
location: region:493432-493977:1
so has part: feature:493432-493977:1:exon
subclass of: SO_0000010

position:493977:1
position: 493977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:493432-493977:1:exon

SGP1_RS02525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02525
old locus tag: SG0273
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410136.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acireductone dioxygenase
translation: MRALTIYSDTDATAPRWQSHEGDAIQRELNAIGVRFERWQTDRELGANPDADTVIAAYQDAIDRLVAEKGYQSWDVISMRPDNPQRETLRTKFLAEHTHGEDEVRFLVEGAGLFCLHVQGKIYQILCEKNDLISVPAGTAHWFDMGEAPSFTAIRVFDNPEGWIARFTGDAIADEYPRLVR
SIO_010081: SGP1_RS02525
subclass of: SO_0000673
so part of: SGP1_RS02525
location: 493432..493977
location: region:493432-493977:1
so has part: feature:493432-493977:1:exon

WP_011410136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:493432-493977:1:exon

SGP1_RS02530
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02530
pseudo: true
so part of: sequence
location: complement(494075..494725)
location: region:494075-494725:-1
so has part: feature:494075-494725:-1:exon
subclass of: SO_0000010

position:494075:-1
position: 494075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:494725:-1
position: 494725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494075-494725:-1:exon

SGP1_RS02530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02530
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016928996.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: SGP1_RS02530
subclass of: SO_0000673
so part of: SGP1_RS02530
location: complement(494075..494725)
location: region:494075-494725:-1
so has part: feature:494075-494725:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:494075-494725:-1:exon

SGP1_RS02535
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: mtnK
locus tag: SGP1_RS02535
pseudo: true
so part of: sequence
location: 494880..496079
location: region:494880-496079:1
so has part: feature:494880-496079:1:exon
subclass of: SO_0000010

position:494880:1
position: 494880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496079:1
position: 496079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494880-496079:1:exon

SGP1_RS02535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: mtnK
locus tag: SGP1_RS02535
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009485216.1
GO function: GO:0046522 - S-methyl-5-thioribose kinase activity [Evidence IEA]
GO process: GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: S-methyl-5-thioribose kinase
SIO_010081: SGP1_RS02535
subclass of: SO_0000673
so part of: SGP1_RS02535
location: 494880..496079
location: region:494880-496079:1
so has part: feature:494880-496079:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:494880-496079:1:exon

SGP1_RS02540
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02540
old locus tag: SG0274
so part of: sequence
location: complement(496501..496812)
location: region:496501-496812:-1
so has part: feature:496501-496812:-1:exon
subclass of: SO_0000010

position:496501:-1
position: 496501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:496812:-1
position: 496812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:496501-496812:-1:exon

SGP1_RS02540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02540
old locus tag: SG0274
EC number: 1.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013573969.1
GO function: GO:0004497 - monooxygenase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: putative quinol monooxygenase
translation: MITVIAEIKVKPGRREAVLAAIESLRPNVLAEDGCGEYTLLTDYKAQIPWRKTTPDSIFMLEQWKSIRHLEQHQQMAHMDAHRANIRDDVMDVTFHILEKRNA
SIO_010081: SGP1_RS02540
subclass of: SO_0000673
so part of: SGP1_RS02540
location: complement(496501..496812)
location: region:496501-496812:-1
so has part: feature:496501-496812:-1:exon

WP_011410137.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:496501-496812:-1:exon

SGP1_RS02545
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: parC
locus tag: SGP1_RS02545
old locus tag: SG0275
so part of: sequence
location: 497085..499358
location: region:497085-499358:1
so has part: feature:497085-499358:1:exon
subclass of: SO_0000010

position:497085:1
position: 497085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499358:1
position: 499358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:497085-499358:1:exon

SGP1_RS02545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: parC
locus tag: SGP1_RS02545
old locus tag: SG0275
EC number: 5.6.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019453059.1
GO component: GO:0009340 - DNA topoisomerase IV complex [Evidence IEA]
GO function: GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA topoisomerase IV subunit A
translation: MSELTHDGAERLALHKFTENAYLNYSMYVIMDRALPFIGDGLKPVQRRIVYAMSELGLNANAKYKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPMVDGQGNWGAPDDPKSFAAMRYTESRLSRYAEVLLGELGQGTVDYVPNFDGTLDEPKMLPARLPNVLLNGTTGIAVGMATDIPPHNVNEVAAAAIALLGNPAATLEQLLEHVKGPDFPTEAEIITPQDDLRKIYHTGRGSVRMRALWTVEDGEAVISALPHQVSGAKVLEQIANQMRAKKLPMVEDLRDESDHENPTRLVIVPRSNRVDLTQVMNHLFATTDLERSYRVNMNMIGLDGRPAVKNLHEILSEWLVYRRDTVRRRLNFRLEKVLRRLHILTGLLVAYLNLDEVIHIIRTKDEPKQVLMQRFELSETQADAILELKLRHLAKLEEMKLRGEQDELEKERDKIQAILASERKLSNLLKKEIEADDAAYGDARRSPLIERGEAKALSENELMPSEPVTVILSTMGWVRSAKGHDIDPSGLGYRSGDNYLSSVRGKSNQPVVFIDSTGRSYALEPACLPSARGQGEPLTGKLTLPPGAAVEQMLTGADERKLLMASDAGYGFVCSFSDLVARNRAGKALLTLPENAKVMPPLWLNGAADKLLALTEAGRLLMFPVDDLPQLSKGKGNKIISIPSADAAAGKDRLAGLYLLSTKASVTFYVGKRKLTLRPEDLQKFSAERGRKGTLLPRGLQHIDRVEITDPLAGVGDEETA
SIO_010081: SGP1_RS02545
subclass of: SO_0000673
so part of: SGP1_RS02545
location: 497085..499358
location: region:497085-499358:1
so has part: feature:497085-499358:1:exon

WP_011410138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:497085-499358:1:exon

SGP1_RS02550
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02550
old locus tag: SG0276
so part of: sequence
location: 499514..500248
location: region:499514-500248:1
so has part: feature:499514-500248:1:exon
subclass of: SO_0000010

position:499514:1
position: 499514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500248:1
position: 500248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:499514-500248:1:exon

SGP1_RS02550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02550
old locus tag: SG0276
EC number: 2.3.1.51
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014888345.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 1-acylglycerol-3-phosphate O-acyltransferase
translation: MLAIVRTILVMLLSILICVFGLIYCLFSPRDPRHVATFGRWFGRMSPLFGIRVEVRRPEGVTLPQNCIYIANHQNNYDMVTAAYVVQPRTVTVGKKSLLWIPLFGPLYWLTGNLLIDRDNSARAHNTLTEIVQSIKKRNISIWMFPEGTRSRGRGLLPFKTGAFYTAIAAGVPIVPICVSNTSNKIKLNRWSNGLVIIEILPPVETSGYSREQVRALTRHCRDVMKNKLDELNAEVARWESLER
SIO_010081: SGP1_RS02550
subclass of: SO_0000673
so part of: SGP1_RS02550
location: 499514..500248
location: region:499514-500248:1
so has part: feature:499514-500248:1:exon

WP_011410139.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:499514-500248:1:exon

SGP1_RS02555
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: ftsP
locus tag: SGP1_RS02555
old locus tag: SG0277
so part of: sequence
location: 500479..501900
location: region:500479-501900:1
so has part: feature:500479-501900:1:exon
subclass of: SO_0000010

position:500479:1
position: 500479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501900:1
position: 501900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500479-501900:1:exon

SGP1_RS02555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: ftsP
locus tag: SGP1_RS02555
old locus tag: SG0277
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005174091.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
GO process: GO:0043093 - FtsZ-dependent cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cell division protein FtsP
translation: MSLSRRRFIQATGATLAASALPLQAQAAETPVALPIPPLLESRRGQPLFLTLQRLHWTFAAGRRAATWGINGGYLGPTVRVYNGDDVNIIYNNRLTEPVAMTVSGLQVPGTLMGGAARMMSPGADWSPVLPIRQTAGTCWYHANTPNRMAPHIYNGLAGLWLVEDAVSKVLPLPNHYGVDDFPLIIQDKRLDNFGQPVYNPPASGGFLGDTLLVNGAQSPFVEVSRGWVRLRLLNASNSRCYQLQLSDGRAMHVVAGDQGFLPAPVPVIRLSLAPGERREILIDMSKGEEVAITAGEAAGLMDRVRGFFEPSSILVNTTVLTLKPTGLLPLVTDNLPMRLLSDQLIDGGISRTREFSLGGSTPDINGALWNMSRNDFQSLQGSFERWIVHTNTPQAFHIQGVAFLIKRVNGNTPLPEDQGWKDTVWVDNEVELLVWFPQVAPDHFPYLYYSQTLEMADRGAAGQFVVRPQSVG
SIO_010081: SGP1_RS02555
subclass of: SO_0000673
so part of: SGP1_RS02555
location: 500479..501900
location: region:500479-501900:1
so has part: feature:500479-501900:1:exon

WP_011410140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:500479-501900:1:exon

SGP1_RS02560
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02560
old locus tag: SG0278
pseudo: true
so part of: sequence
location: complement(502117..502881)
location: region:502117-502881:-1
so has part: feature:502117-502881:-1:exon
subclass of: SO_0000010

position:502117:-1
position: 502117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502881:-1
position: 502881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:502117-502881:-1:exon

SGP1_RS02560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02560
old locus tag: SG0278
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008815440.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: aldo/keto reductase
SIO_010081: SGP1_RS02560
subclass of: SO_0000673
so part of: SGP1_RS02560
location: complement(502117..502881)
location: region:502117-502881:-1
so has part: feature:502117-502881:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:502117-502881:-1:exon

SGP1_RS02565
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02565
old locus tag: SG0279
so part of: sequence
location: complement(503035..503697)
location: region:503035-503697:-1
so has part: feature:503035-503697:-1:exon
subclass of: SO_0000010

position:503035:-1
position: 503035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:503697:-1
position: 503697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:503035-503697:-1:exon

SGP1_RS02565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02565
old locus tag: SG0279
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013027223.1
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DedA family protein
translation: MNLLEEIIRALWHQDFAALADPQMIWVVYGVIFTTLFLENGLLPASFLPGDSLLLLSGAMVAKGVMAFFPTLIILSAAAGLGCWFSYLQDRWLGDTRIMRSWLPHLPAHYHLRAYTMFNRHGLTALLVGRFLAFVRTLLPTMAGISGLSNTRFQLFNWLSALIWVTVLVSLGYAISHVPMVKHHEDKVMMALIILPLVLLVTGLIGSVLLIIRRRRVKNA
SIO_010081: SGP1_RS02565
subclass of: SO_0000673
so part of: SGP1_RS02565
location: complement(503035..503697)
location: region:503035-503697:-1
so has part: feature:503035-503697:-1:exon

WP_041867343.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:503035-503697:-1:exon

SGP1_RS02570
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: metC
locus tag: SGP1_RS02570
old locus tag: SG0280
so part of: sequence
location: complement(503845..505041)
location: region:503845-505041:-1
so has part: feature:503845-505041:-1:exon
subclass of: SO_0000010

position:503845:-1
position: 503845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505041:-1
position: 505041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:503845-505041:-1:exon

SGP1_RS02570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: metC
locus tag: SGP1_RS02570
old locus tag: SG0280
EC number: 4.4.1.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013814596.1
GO function: GO:0004121 - cystathionine beta-lyase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO process: GO:0006520 - amino acid metabolic process [Evidence IEA]; GO:0019346 - transsulfuration [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cystathionine beta-lyase
translation: MTSKKLETVLISAGRKPAFTQGSVNPIIQRASSLVFDSVQHKKKATAGRASGELYYGRRGTLTHFSLQQAMVELEGGAGCAFYPCGTAAVSNAILSFVSAGDHILVTGSAYEPTQDFCRQILGKMNITTTWFDPLIGADIGDLIQDNTRVVMLESPGSITMEVQDIPAIVRAVRAKNPDIIIMLDNTWAAGVLLKALDLGVDISLQAGTKYLIGHSDAMIGTAVANARCWDQLREQSYLMGQMVDADTAYMAERGLRTLGIRLKQHEENGLRVARWLTQRPEVAVVNHPALPGCKGHEAFLRDFTGASGLFSFVLKQRLSDDQLAHYLDHFTHFSISYSWGGFESLIMANQPEELAAIRPAGGVDFTGTLVRLHIGLESCEDLIDDLASGFARIASSK
SIO_010081: SGP1_RS02570
subclass of: SO_0000673
so part of: SGP1_RS02570
location: complement(503845..505041)
location: region:503845-505041:-1
so has part: feature:503845-505041:-1:exon

WP_011410143.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:503845-505041:-1:exon

SGP1_RS02575
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: exbB
locus tag: SGP1_RS02575
old locus tag: SG0281
so part of: sequence
location: 505472..506407
location: region:505472-506407:1
so has part: feature:505472-506407:1:exon
subclass of: SO_0000010

position:505472:1
position: 505472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506407:1
position: 506407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:505472-506407:1:exon

SGP1_RS02575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: exbB
locus tag: SGP1_RS02575
old locus tag: SG0281
EC number: 3.1.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006320629.1
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tol-pal system-associated acyl-CoA thioesterase
translation: MLRAIFLSLLLGSGVAGNALAAPATAATQSDAAAADAGAANTTPAPAAAQPATSGPLSMQVPVGATPAQQQLMQMDLSVWGMYQHADVVVKIVMIGLLLASVVTWALFFGKGAELLAVKRRLRRELLLLKDVRSLDQATTVAANFSPRSLSVSLLAETANELDLSARLSDNNGIKERVAFRLERRVAGVSRAMGKGNGFLATIGAISPFIGLFGTVWGIMNSFIGIAHTQTTNLAVVAPGIAEALLATAIGLFAAIPAVVIYNVFARTIAGYKAMVGDCAAQLLLLLGRDLDLAAEAGSQVSAQVTKFRVG
SIO_010081: SGP1_RS02575
subclass of: SO_0000673
so part of: SGP1_RS02575
location: 505472..506407
location: region:505472-506407:1
so has part: feature:505472-506407:1:exon

WP_083764648.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:505472-506407:1:exon

SGP1_RS02580
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
gene: exbD
locus tag: SGP1_RS02580
old locus tag: SG0282
so part of: sequence
location: 506411..506839
location: region:506411-506839:1
so has part: feature:506411-506839:1:exon
subclass of: SO_0000010

position:506411:1
position: 506411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506839:1
position: 506839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:506411-506839:1:exon

SGP1_RS02580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
gene: exbD
locus tag: SGP1_RS02580
old locus tag: SG0282
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015835631.1
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TonB system transport protein ExbD
translation: MAMHLNEDVDTDGEMHDINVTPFIDVMLVLLIIFMIAAPLATVDIRVDLPNSTAKPQPRPADKPLYLSVKADKQLYIGDKTVTMATLAQMLDEQTQGNKETPIFFQADKSVDYATLMSVMDSLRKAGYFKVGLVGLESPGQG
SIO_010081: SGP1_RS02580
subclass of: SO_0000673
so part of: SGP1_RS02580
location: 506411..506839
location: region:506411-506839:1
so has part: feature:506411-506839:1:exon

WP_011410145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:506411-506839:1:exon

SGP1_RS02585
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02585
pseudo: true
so part of: sequence
location: complement(507104..507984)
location: region:507104-507984:-1
so has part: feature:507104-507984:-1:exon
subclass of: SO_0000010

position:507104:-1
position: 507104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:507984:-1
position: 507984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507104-507984:-1:exon

SGP1_RS02585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02585
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020455261.1
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: SDR family oxidoreductase
SIO_010081: SGP1_RS02585
subclass of: SO_0000673
so part of: SGP1_RS02585
location: complement(507104..507984)
location: region:507104-507984:-1
so has part: feature:507104-507984:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:507104-507984:-1:exon

SGP1_RS02590
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02590
old locus tag: SG0284
so part of: sequence
location: 508464..509093
location: region:508464-509093:1
so has part: feature:508464-509093:1:exon
subclass of: SO_0000010

position:508464:1
position: 508464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509093:1
position: 509093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:508464-509093:1:exon

SGP1_RS02590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02590
old locus tag: SG0284
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002211858.1
GO function: GO:0016740 - transferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyl-homoserine-lactone synthase
translation: MFNLINVEYKDIINDRLEELYLLRKRTFKDRLNWKVSCKGEREFDEYDNENTHYLLGCYNGELICSVRFISMKYPNMITGPFRDFFRYEAPADDALFESSRFFVDKDRVKSLTETKLPFCHLLFLGMINYTRAVGMKGILTVCSRSMYTILKRSGWLIEVQTIGSSEKDEPVYLLRLPIDDDSQANLIKYIRRYHYCDEYYLKKWPVYL
SIO_010081: SGP1_RS02590
subclass of: SO_0000673
so part of: SGP1_RS02590
location: 508464..509093
location: region:508464-509093:1
so has part: feature:508464-509093:1:exon

WP_011410147.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:508464-509093:1:exon

SGP1_RS02595
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02595
old locus tag: SG0285
so part of: sequence
location: complement(509237..509974)
location: region:509237-509974:-1
so has part: feature:509237-509974:-1:exon
subclass of: SO_0000010

position:509237:-1
position: 509237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:509974:-1
position: 509974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:509237-509974:-1:exon

SGP1_RS02595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02595
old locus tag: SG0285
inference: COORDINATES: protein motif:HMM:NF015437.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LuxR family transcriptional regulator
translation: MFSIIKPFTSRENGLVTAEIHDLLQHEMNINQPIRFAYFIFNKSQDEKPVIYSNYPKEWVEKYMKNKLYKQDPVLLVASQKIMSFPWQKNYFKKTKHQKSNIFAQSSEYNITRGYTFPLHDHENNLAMLSLYTESDPDQLMKCISDHEDRLYLLFLSIHNRFLAEKAQQTNTSNTKIEKRLTSREIEALHWASIGKTYREIAIIMGITESTVKFHIGNLIVKLDVINAKHAIKKATDLHLLNFNE
SIO_010081: SGP1_RS02595
subclass of: SO_0000673
so part of: SGP1_RS02595
location: complement(509237..509974)
location: region:509237-509974:-1
so has part: feature:509237-509974:-1:exon

WP_011410148.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:509237-509974:-1:exon

SGP1_RS02600
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02600
old locus tag: SG0286
so part of: sequence
location: 510600..511235
location: region:510600-511235:1
so has part: feature:510600-511235:1:exon
subclass of: SO_0000010

position:510600:1
position: 510600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:511235:1
position: 511235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510600-511235:1:exon

SGP1_RS02600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02600
old locus tag: SG0286
inference: COORDINATES: protein motif:HMM:NF024202.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CSS-motif domain-containing protein
translation: MLFVSQQNSKTQARHDIHSLVGFIDTVMDNGDKAAQQALMLAGCPCATVLETLSGLARQYPLPLGQFGGSKWPLLFSAAGNRDKRGAGTHARRWKGAALSLHAGPAAAEIVLQQRRGQPRAVVIIDSHTLRTIMNTLSPSRPVILAIGDTLLTPAGTHTPLGAQDPHRHIVTGASARYPYRLQAVMTPGVPWSYFLINDGHMILLVAAIER
SIO_010081: SGP1_RS02600
subclass of: SO_0000673
so part of: SGP1_RS02600
location: 510600..511235
location: region:510600-511235:1
so has part: feature:510600-511235:1:exon

WP_158302315.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:510600-511235:1:exon

SGP1_RS02605
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02605
so part of: sequence
location: 511235..511909
location: region:511235-511909:1
so has part: feature:511235-511909:1:exon
subclass of: SO_0000010

position:511909:1
position: 511909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511235-511909:1:exon

SGP1_RS02605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02605
inference: COORDINATES: protein motif:HMM:NF012772.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EAL domain-containing protein
translation: MMALLIHHMMLGLKRNEFEAYYQPVMNVARGYCSCVEILVCWRRHPVDGIISPDVFVPLAETSGLILPLTAKLMAQVADDLAQHWRADDETLHVAFNIAAIHLQSDYIVKDCRQFLHKVHRRRILLVLELTERQYIEFNAATRHVLASLQALGVIIAIDDFGTGYSGLSYLGNMQINLLKIDRSFVAMIGLEDSATDLVTGRDPFSLSLPATGHLQNQVNYGLH
SIO_010081: SGP1_RS02605
subclass of: SO_0000673
so part of: SGP1_RS02605
location: 511235..511909
location: region:511235-511909:1
so has part: feature:511235-511909:1:exon

WP_050747363.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:511235-511909:1:exon

SGP1_RS02610
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS02610
old locus tag: SG0287
pseudo: true
so part of: sequence
location: complement(512234..513140)
location: region:512234-513140:-1
so has part: feature:512234-513140:-1:exon
subclass of: SO_0000010

position:512234:-1
position: 512234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:513140:-1
position: 513140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512234-513140:-1:exon

SGP1_RS02610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS02610
old locus tag: SG0287
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000082157.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: SGP1_RS02610
subclass of: SO_0000673
so part of: SGP1_RS02610
location: complement(512234..513140)
location: region:512234-513140:-1
so has part: feature:512234-513140:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:512234-513140:-1:exon

SGP1_RS32500
type: Gene
subclass of: SO_0000704
RO_0002162: 343509
locus tag: SGP1_RS32500
pseudo: true
so part of: sequence
location: 514071..>514753
location: region:514071-514753:1
so has part: feature:514071-514753:1:exon
subclass of: SO_0000010

position:514071:1
position: 514071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:514753:1
position: 514753
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:514071-514753:1:exon

SGP1_RS32500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 343509
locus tag: SGP1_RS32500
inference: COORDINATES: protein motif:HMM:NF012544.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: amino acid permease
SIO_010081: SGP1_RS32500
subclass of: SO_0000673
so part of: SGP1_RS32500
location: 514071..>514753
location: region:514071-514753:1
so has part: feature:514071-514753:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:514071-514753:1:exon