Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence.
Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Paracoccaceae; Paracoccus.
Submitted (31-MAR-2015) CEBITEC, Genome Research of Industrial Microorganisms (GRIM), Universitaetsstrasse 27, 33615, NRW, Germany
REFSEQ INFORMATION: The reference sequence is identical to\nLN832562.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/25/2022 02:10:07\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,943\nCDSs (total) :: 3,881\nGenes (coding) :: 3,739\nCDSs (with protein) :: 3,739\nGenes (RNA) :: 62\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 50\nncRNAs :: 3\nPseudo Genes (total) :: 142\nCDSs (without protein) :: 142\nPseudo Genes (ambiguous residues) :: 0 of 142\nPseudo Genes (frameshifted) :: 68 of 142\nPseudo Genes (incomplete) :: 102 of 142\nPseudo Genes (internal stop) :: 29 of 142\nPseudo Genes (multiple problems) :: 45 of 142\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_011749186.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
ParB N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010398786.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_018000633.1
DnaA N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011749190.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0004076 - biotin synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0009102 - biotin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010398795.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_008557145.1
GO:0004141 - dethiobiotin synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010398798.1
GO:0004015 - adenosylmethionine-8-amino-7-oxononanoate transaminase activity [Evidence IEA]
adenosylmethionine--8-amino-7-oxononanoate transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_011749194.1
COORDINATES: similar to AA sequence:RefSeq:WP_011749195.1
GO:0008168 - methyltransferase activity [Evidence IEA]
methyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015318843.1
COORDINATES: protein motif:HMM:NF024952.2
COORDINATES: similar to AA sequence:RefSeq:WP_011749204.1
COORDINATES: similar to AA sequence:RefSeq:WP_011749205.1
COORDINATES: similar to AA sequence:RefSeq:WP_011292537.1
COORDINATES: similar to AA sequence:RefSeq:WP_018000640.1
COORDINATES: similar to AA sequence:RefSeq:WP_008885119.1
COORDINATES: similar to AA sequence:RefSeq:WP_018389160.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_018389159.1
COORDINATES: protein motif:HMM:TIGR01783.1
GO:0019867 - outer membrane [Evidence IEA]
GO:0015343 - siderophore-iron transmembrane transporter activity [Evidence IEA]
GO:0015891 - siderophore transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018000519.1
COORDINATES: similar to AA sequence:RefSeq:WP_011749207.1
GO:0004160 - dihydroxy-acid dehydratase activity [Evidence IEA]
GO:0009082 - branched-chain amino acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004117265.1
CDP-alcohol phosphatidyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010396501.1
COORDINATES: similar to AA sequence:RefSeq:WP_018000515.1
lysophospholipid acyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018001427.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751250.1
energy-coupling factor transporter transmembrane protein EcfT
COORDINATES: similar to AA sequence:RefSeq:WP_018001425.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0015225 - biotin transmembrane transporter activity [Evidence IEA]
GO:0015878 - biotin transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018001424.1
COORDINATES: similar to AA sequence:RefSeq:WP_007118107.1
COORDINATES: similar to AA sequence:RefSeq:WP_015497142.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001178.1
COORDINATES: similar to AA sequence:RefSeq:WP_015933583.1
GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis, and/or gluconeogenesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018001166.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001161.1
COORDINATES: similar to AA sequence:RefSeq:WP_010397736.1
COORDINATES: similar to AA sequence:RefSeq:WP_011746651.1
LysR substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011746652.1
COORDINATES: similar to AA sequence:RefSeq:WP_010397765.1
COORDINATES: similar to AA sequence:RefSeq:WP_010397784.1
COORDINATES: similar to AA sequence:RefSeq:WP_010397786.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001154.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001153.1
GO:0003824 - catalytic activity [Evidence IEA]
NAD-dependent epimerase/dehydratase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018001152.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001151.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001150.1
COORDINATES: similar to AA sequence:RefSeq:WP_011746668.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001148.1
COORDINATES: similar to AA sequence:RefSeq:WP_011746670.1
biotin carboxylase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011974648.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001145.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001144.1
COORDINATES: similar to AA sequence:RefSeq:WP_018065111.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001141.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001140.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018001139.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001353.1
COORDINATES: similar to AA sequence:RefSeq:WP_011750596.1
COORDINATES: similar to AA sequence:RefSeq:WP_012334278.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001350.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001349.1
COORDINATES: similar to AA sequence:RefSeq:WP_010396418.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007814131.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001344.1
COORDINATES: similar to AA sequence:RefSeq:WP_010396409.1
COORDINATES: similar to AA sequence:RefSeq:WP_012650251.1
COORDINATES: similar to AA sequence:RefSeq:WP_012650249.1
FadR/GntR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_018001343.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001330.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada
COORDINATES: similar to AA sequence:RefSeq:WP_011751322.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751323.1
GO:0009486 - cytochrome bo3 ubiquinol oxidase activity [Evidence IEA]
GO:0015990 - electron transport coupled proton transport [Evidence IEA]
cytochrome o ubiquinol oxidase subunit IV
COORDINATES: similar to AA sequence:RefSeq:WP_011751324.1
cytochrome o ubiquinol oxidase subunit III
COORDINATES: similar to AA sequence:RefSeq:WP_018001322.1
cytochrome o ubiquinol oxidase subunit I
COORDINATES: similar to AA sequence:RefSeq:WP_018001321.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001320.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018001318.1
COORDINATES: similar to AA sequence:RefSeq:WP_011750637.1
CaiB/BaiF CoA-transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018001383.1
COORDINATES: similar to AA sequence:RefSeq:WP_011746657.1
COORDINATES: similar to AA sequence:RefSeq:WP_006700422.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014530139.1
tripartite tricarboxylate transporter substrate binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_018001380.1
tripartite tricarboxylate transporter TctB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007797767.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
tripartite tricarboxylate transporter permease
COORDINATES: protein motif:HMM:NF021456.2
COORDINATES: protein motif:HMM:NF025047.2
COORDINATES: similar to AA sequence:RefSeq:WP_010396497.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001372.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
GO:0006790 - sulfur compound metabolic process [Evidence IEA]
sulfate adenylyltransferase subunit CysN
COORDINATES: similar to AA sequence:RefSeq:WP_018001371.1
GO:0004781 - sulfate adenylyltransferase (ATP) activity [Evidence IEA]
GO:0019419 - sulfate reduction [Evidence IEA]
sulfate adenylyltransferase subunit CysD
COORDINATES: similar to AA sequence:RefSeq:WP_013383255.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011750619.1
GO:0009331 - glycerol-3-phosphate dehydrogenase complex [Evidence IEA]
GO:0004368 - glycerol-3-phosphate dehydrogenase (quinone) activity [Evidence IEA]
GO:0006072 - glycerol-3-phosphate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015920434.1
COORDINATES: similar to AA sequence:RefSeq:WP_011750617.1
COORDINATES: similar to AA sequence:RefSeq:WP_010396463.1
COORDINATES: similar to AA sequence:RefSeq:WP_011337643.1
COORDINATES: similar to AA sequence:RefSeq:WP_003530327.1
COORDINATES: similar to AA sequence:RefSeq:WP_009464527.1
COORDINATES: similar to AA sequence:RefSeq:WP_011748898.1
GO:0004370 - glycerol kinase activity [Evidence IEA]
GO:0006071 - glycerol metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012452277.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006333993.1
YggS family pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_011750810.1
COORDINATES: similar to AA sequence:RefSeq:WP_013503847.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019350.2
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011478812.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
two-component system response regulator NarL
COORDINATES: similar to AA sequence:RefSeq:WP_013214239.1
COORDINATES: similar to AA sequence:RefSeq:WP_015830961.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020087115.1
GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012249952.1
COORDINATES: similar to AA sequence:RefSeq:WP_019858718.1
COORDINATES: similar to AA sequence:RefSeq:WP_012709141.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751287.1
GO:0019346 - transsulfuration [Evidence IEA]
COORDINATES: protein motif:HMM:NF016627.2
GO:0003839 - gamma-glutamylcyclotransferase activity [Evidence IEA]
GO:0006751 - glutathione catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007880304.1
GO:0005992 - trehalose biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013651504.1
COORDINATES: protein motif:HMM:TIGR00685.1
GO:0004805 - trehalose-phosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF005559.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: protein motif:HMM:NF024950.2
COORDINATES: similar to AA sequence:RefSeq:WP_011457065.1
COORDINATES: similar to AA sequence:RefSeq:WP_011457064.1
COORDINATES: similar to AA sequence:RefSeq:WP_007811403.1
COORDINATES: similar to AA sequence:RefSeq:WP_011046426.1
COORDINATES: similar to AA sequence:RefSeq:WP_007119613.1
COORDINATES: similar to AA sequence:RefSeq:WP_012314546.1
GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: protein motif:HMM:NF017690.2
COORDINATES: similar to AA sequence:RefSeq:WP_076611976.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011910674.1
COORDINATES: similar to AA sequence:RefSeq:WP_017361815.1
COORDINATES: similar to AA sequence:RefSeq:WP_009572005.1
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012778788.1
COORDINATES: similar to AA sequence:RefSeq:WP_043766072.1
COORDINATES: similar to AA sequence:RefSeq:WP_020800997.1
COORDINATES: similar to AA sequence:RefSeq:WP_010660436.1
COORDINATES: similar to AA sequence:RefSeq:WP_010394683.1
COORDINATES: similar to AA sequence:RefSeq:WP_010394681.1
nucleobase:cation symporter-2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010394679.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611367.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011842389.1
3-keto-5-aminohexanoate cleavage protein
COORDINATES: similar to AA sequence:RefSeq:WP_008959032.1
aspartate aminotransferase family protein
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: similar to AA sequence:RefSeq:WP_013385371.1
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: similar to AA sequence:RefSeq:WP_010972965.1
GO:0016020 - membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0048038 - quinone binding [Evidence IEA]
membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family
COORDINATES: similar to AA sequence:RefSeq:WP_012187433.1
sigma-54-dependent Fis family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_009570225.1
COORDINATES: similar to AA sequence:RefSeq:WP_014544559.1
COORDINATES: similar to AA sequence:RefSeq:WP_016347966.1
COORDINATES: similar to AA sequence:RefSeq:WP_007007636.1
COORDINATES: protein motif:HMM:NF012786.2
GO:0015473 - fimbrial usher porin activity [Evidence IEA]
GO:0009297 - pilus assembly [Evidence IEA]
fimbria/pilus outer membrane usher protein
COORDINATES: protein motif:HMM:NF017079.2
COORDINATES: similar to AA sequence:RefSeq:WP_011750836.1
COORDINATES: similar to AA sequence:RefSeq:WP_005851883.1
COORDINATES: protein motif:HMM:NF016648.2
COORDINATES: similar to AA sequence:RefSeq:WP_007769158.1
COORDINATES: protein motif:HMM:NF015431.2
COORDINATES: similar to AA sequence:RefSeq:WP_019620258.1
aromatic ring-hydroxylating dioxygenase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_014677167.1
COORDINATES: similar to AA sequence:RefSeq:WP_019620260.1
COORDINATES: similar to AA sequence:RefSeq:WP_019620261.1
COORDINATES: protein motif:HMM:NF018275.2
COORDINATES: similar to AA sequence:RefSeq:WP_011505992.1
COORDINATES: similar to AA sequence:RefSeq:WP_014457351.1
COORDINATES: similar to AA sequence:RefSeq:WP_011907721.1
COORDINATES: similar to AA sequence:RefSeq:WP_008029687.1
COORDINATES: similar to AA sequence:RefSeq:WP_008029689.1
COORDINATES: similar to AA sequence:RefSeq:WP_011748436.1
COORDINATES: similar to AA sequence:RefSeq:WP_011747203.1
COORDINATES: similar to AA sequence:RefSeq:WP_018633630.1
COORDINATES: similar to AA sequence:RefSeq:WP_011747205.1
iron ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011747206.1
GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO
COORDINATES: similar to AA sequence:RefSeq:WP_011747496.1
COORDINATES: similar to AA sequence:RefSeq:WP_011747349.1
COORDINATES: similar to AA sequence:RefSeq:WP_018000969.1
GO:0047789 - creatininase activity [Evidence IEA]
GO:0046449 - creatinine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018000970.1
COORDINATES: similar to AA sequence:RefSeq:WP_011747352.1
spermidine/putrescine ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_018000972.1
COORDINATES: similar to AA sequence:RefSeq:WP_018000973.1
COORDINATES: similar to AA sequence:RefSeq:WP_011747355.1
COORDINATES: similar to AA sequence:RefSeq:WP_017998436.1
COORDINATES: similar to AA sequence:RefSeq:WP_011747250.1
COORDINATES: similar to AA sequence:RefSeq:WP_009521638.1
COORDINATES: similar to AA sequence:RefSeq:WP_018394363.1
COORDINATES: protein motif:HMM:NF013720.2
COORDINATES: similar to AA sequence:RefSeq:WP_007585720.1
electron transfer flavoprotein subunit alpha/FixB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013148092.1
electron transfer flavoprotein subunit beta/FixA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009521629.1
heterodisulfide reductase-related iron-sulfur binding cluster
COORDINATES: similar to AA sequence:RefSeq:WP_020087111.1
COORDINATES: protein motif:HMM:NF019349.2
COORDINATES: similar to AA sequence:RefSeq:WP_019294532.1
COORDINATES: similar to AA sequence:RefSeq:WP_011693237.1
GO:0036361 - racemase activity, acting on amino acids and derivatives [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
aspartate/glutamate racemase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010396477.1
NCS1 family nucleobase:cation symporter-1
COORDINATES: similar to AA sequence:RefSeq:WP_010396479.1
COORDINATES: similar to AA sequence:RefSeq:WP_020186162.1
COORDINATES: similar to AA sequence:RefSeq:WP_015923195.1
COORDINATES: similar to AA sequence:RefSeq:WP_007576211.1
hydantoinase/oxoprolinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_020184743.1
hydantoinase B/oxoprolinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014925617.1
COORDINATES: protein motif:HMM:NF015799.2
COORDINATES: protein motif:HMM:NF024825.2
transporter substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010660441.1
glycine betaine/L-proline transporter ProP
COORDINATES: protein motif:HMM:NF026909.2
COORDINATES: protein motif:HMM:TIGR03696.1
RHS repeat-associated core domain-containing protein
COORDINATES: protein motif:HMM:NF020366.2
COORDINATES: similar to AA sequence:RefSeq:WP_009178544.1
GO:0003674 - molecular_function [Evidence IEA]
GO:0033103 - protein secretion by the type VI secretion system [Evidence IEA]
type VI secretion system tip protein TssI/VgrG
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005859550.1
COORDINATES: similar to AA sequence:RefSeq:WP_013962996.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010393314.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0006783 - heme biosynthetic process [Evidence IEA]; GO:0046500 - S-adenosylmethionine metabolic process [Evidence IEA]
heme d1 biosynthesis radical SAM protein NirJ
COORDINATES: similar to AA sequence:RefSeq:WP_011748773.1
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011748772.1
COORDINATES: similar to AA sequence:RefSeq:WP_010443100.1
COORDINATES: similar to AA sequence:RefSeq:WP_010393308.1
COORDINATES: similar to AA sequence:RefSeq:WP_013651331.1
COORDINATES: similar to AA sequence:RefSeq:WP_008027073.1
GO:0004851 - uroporphyrin-III C-methyltransferase activity [Evidence IEA]
GO:0019354 - siroheme biosynthetic process [Evidence IEA]
uroporphyrinogen-III C-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012179840.1
COORDINATES: similar to AA sequence:RefSeq:WP_013651334.1
COORDINATES: similar to AA sequence:RefSeq:WP_013069297.1
GO:0017013 - protein flavinylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017999249.1
GO:0006744 - ubiquinone biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011909346.1
COORDINATES: similar to AA sequence:RefSeq:WP_011750456.1
SCP2 sterol-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011750455.1
COORDINATES: similar to AA sequence:RefSeq:WP_010397529.1
COORDINATES: protein motif:HMM:NF017727.2
COORDINATES: similar to AA sequence:RefSeq:WP_019173505.1
COORDINATES: similar to AA sequence:RefSeq:WP_018000938.1
methyltetrahydrofolate cobalamin methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_018000937.1
COORDINATES: similar to AA sequence:RefSeq:WP_012651718.1
methylenetetrahydrofolate reductase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019173510.1
COORDINATES: similar to AA sequence:RefSeq:WP_018000934.1
COORDINATES: similar to AA sequence:RefSeq:WP_018000933.1
trimethylamine methyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008876418.1
COORDINATES: similar to AA sequence:RefSeq:WP_018000931.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751338.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751340.1
Lrp/AsnC family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_017999700.1
COORDINATES: similar to AA sequence:RefSeq:WP_011750248.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001204.1
GO:0140737 - encapsulin nanocompartment [Evidence IEA]
family 1 encapsulin nanocompartment shell protein
COORDINATES: similar to AA sequence:RefSeq:WP_012649630.1
COORDINATES: similar to AA sequence:RefSeq:WP_011749294.1
COORDINATES: protein motif:HMM:NF040453.1
COORDINATES: protein motif:HMM:NF013412.2
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: protein motif:HMM:NF014068.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018000887.1
COORDINATES: similar to AA sequence:RefSeq:WP_018000888.1
COORDINATES: similar to AA sequence:RefSeq:WP_018000889.1
COORDINATES: similar to AA sequence:RefSeq:WP_018000890.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
GO:0015220 - choline transmembrane transporter activity [Evidence IEA]
GO:0015871 - choline transport [Evidence IEA]
choline ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007425493.1
metal ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_019297677.1
manganese/iron ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_019997660.1
COORDINATES: similar to AA sequence:RefSeq:WP_013385379.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_010396433.1
GO:0097573 - glutathione oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011750602.1
GO:0009263 - deoxyribonucleotide biosynthetic process [Evidence IEA]
class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI
COORDINATES: similar to AA sequence:RefSeq:WP_011750603.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
class 1b ribonucleoside-diphosphate reductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_018001358.1
GO:0005971 - ribonucleoside-diphosphate reductase complex [Evidence IEA]
GO:0030145 - manganese ion binding [Evidence IEA]; GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]
class 1b ribonucleoside-diphosphate reductase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_018001359.1
bile acid:sodium symporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004691143.1
LLM class flavin-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_018001136.1
COORDINATES: similar to AA sequence:RefSeq:WP_011746675.1
COORDINATES: similar to AA sequence:RefSeq:WP_011746676.1
COORDINATES: similar to AA sequence:RefSeq:WP_011746677.1
COORDINATES: similar to AA sequence:RefSeq:WP_010397829.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001131.1
GO:0006749 - glutathione metabolic process [Evidence IEA]
glutathione S-transferase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009561688.1
GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018001129.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611905.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010665924.1
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018427261.1
COORDINATES: protein motif:HMM:NF012415.2
COORDINATES: similar to AA sequence:RefSeq:WP_018001460.1
GO:0045027 - DNA end binding [Evidence IEA]
GO:0006303 - double-strand break repair via nonhomologous end joining [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014762428.1
COORDINATES: similar to AA sequence:RefSeq:WP_010163358.1
zinc-dependent alcohol dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018001079.1
heme ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_019955022.1
COORDINATES: similar to AA sequence:RefSeq:WP_010397551.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001076.1
ChuX/HutX family heme-like substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011750430.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_076611390.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018001074.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001067.1
BTAD domain-containing putative transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_018001066.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001065.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001064.1
COORDINATES: similar to AA sequence:RefSeq:WP_006698012.1
zinc ribbon domain-containing protein YjdM
COORDINATES: similar to AA sequence:RefSeq:WP_011747981.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001061.1
COORDINATES: similar to AA sequence:RefSeq:WP_008936177.1
COORDINATES: similar to AA sequence:RefSeq:WP_011950286.1
COORDINATES: similar to AA sequence:RefSeq:WP_018094283.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001056.1
COORDINATES: similar to AA sequence:RefSeq:WP_010973576.1
COORDINATES: similar to AA sequence:RefSeq:WP_018235210.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010395387.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001052.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001051.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001050.1
HAMP domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_010395378.1
GO:0004592 - pantoate-beta-alanine ligase activity [Evidence IEA]
GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018001048.1
GO:0003864 - 3-methyl-2-oxobutanoate hydroxymethyltransferase activity [Evidence IEA]
3-methyl-2-oxobutanoate hydroxymethyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_018001047.1
GO:0003942 - N-acetyl-gamma-glutamyl-phosphate reductase activity [Evidence IEA]
GO:0006592 - ornithine biosynthetic process [Evidence IEA]
N-acetyl-gamma-glutamyl-phosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_007668992.1
COORDINATES: similar to AA sequence:RefSeq:WP_010395373.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011747949.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011747948.1
COORDINATES: similar to AA sequence:RefSeq:WP_011747693.1
COORDINATES: similar to AA sequence:RefSeq:WP_013385720.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013385721.1
COORDINATES: similar to AA sequence:RefSeq:WP_013385722.1
COORDINATES: similar to AA sequence:RefSeq:WP_013385723.1
COORDINATES: protein motif:HMM:NF013862.2
GO:0006629 - lipid metabolic process [Evidence IEA]
patatin-like phospholipase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012701796.1
COORDINATES: protein motif:HMM:NF012354.2
COORDINATES: similar to AA sequence:RefSeq:WP_013963210.1
COORDINATES: similar to AA sequence:RefSeq:WP_013963211.1
COORDINATES: similar to AA sequence:RefSeq:WP_013963212.1
COORDINATES: similar to AA sequence:RefSeq:WP_019933496.1
COORDINATES: similar to AA sequence:RefSeq:WP_011580901.1
COORDINATES: similar to AA sequence:RefSeq:WP_004303334.1
COORDINATES: similar to AA sequence:RefSeq:WP_003592482.1
COORDINATES: similar to AA sequence:RefSeq:WP_007427948.1
COORDINATES: similar to AA sequence:RefSeq:WP_013963214.1
GO:0004053 - arginase activity [Evidence IEA]
GO:0019547 - arginine catabolic process to ornithine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008546896.1
COORDINATES: similar to AA sequence:RefSeq:WP_011749307.1
COORDINATES: similar to AA sequence:RefSeq:WP_017998877.1
COORDINATES: similar to AA sequence:RefSeq:WP_014531100.1
COORDINATES: similar to AA sequence:RefSeq:WP_012112893.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_010398862.1
GO:0008794 - arsenate reductase (glutaredoxin) activity [Evidence IEA]
This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite, after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell, providing resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010400456.1
GO:0008490 - arsenite secondary active transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017998456.1
COORDINATES: protein motif:HMM:NF012870.2
Mu transposase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_020041014.1
COORDINATES: protein motif:HMM:NF018259.2
COORDINATES: similar to AA sequence:RefSeq:WP_009722230.1
C45 family autoproteolytic acyltransferase/hydolase
COORDINATES: similar to AA sequence:RefSeq:WP_010322087.1
GO:0015424 - ABC-type amino acid transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0003333 - amino acid transmembrane transport [Evidence IEA]
glutamine ABC transporter ATP-binding protein GlnQ
COORDINATES: similar to AA sequence:RefSeq:WP_007534488.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008921768.1
GO:0015276 - ligand-gated monoatomic ion channel activity [Evidence IEA]
glutamine ABC transporter substrate-binding protein GlnH
COORDINATES: similar to AA sequence:RefSeq:WP_010398755.1
COORDINATES: protein motif:HMM:NF012801.2
COORDINATES: similar to AA sequence:RefSeq:WP_011747925.1
COORDINATES: similar to AA sequence:RefSeq:WP_019473289.1
COORDINATES: similar to AA sequence:RefSeq:WP_012565569.1
PepSY-associated TM helix domain-containing protein
COORDINATES: protein motif:HMM:NF023232.2
COORDINATES: protein motif:HMM:NF036520.2
COORDINATES: similar to AA sequence:RefSeq:WP_019644520.1
COORDINATES: similar to AA sequence:RefSeq:WP_008886116.1
iron chelate uptake ABC transporter family permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_018115338.1
COORDINATES: similar to AA sequence:RefSeq:WP_013690308.1
COORDINATES: similar to AA sequence:RefSeq:WP_014252420.1
COORDINATES: similar to AA sequence:RefSeq:WP_014197892.1
COORDINATES: similar to AA sequence:RefSeq:WP_010485494.1
COORDINATES: similar to AA sequence:RefSeq:WP_018389465.1
COORDINATES: similar to AA sequence:RefSeq:WP_009518926.1
COORDINATES: protein motif:HMM:NF021158.2
COORDINATES: similar to AA sequence:RefSeq:WP_019297199.1
COORDINATES: similar to AA sequence:RefSeq:WP_017999239.1
GO:0008410 - CoA-transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018000689.1
COORDINATES: similar to AA sequence:RefSeq:WP_007204692.1
COORDINATES: similar to AA sequence:RefSeq:WP_008557320.1
GO:0018578 - protocatechuate 3,4-dioxygenase activity [Evidence IEA]
GO:0046278 - 3,4-dihydroxybenzoate metabolic process [Evidence IEA]
protocatechuate 3,4-dioxygenase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_008885168.1
protocatechuate 3,4-dioxygenase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_018304131.1
GO:0047575 - 4-carboxymuconolactone decarboxylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018633650.1
GO:0047570 - 3-oxoadipate enol-lactonase activity [Evidence IEA]
GO:0042952 - beta-ketoadipate pathway [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013382870.1
sugar phosphate isomerase/epimerase and 4-hydroxyphenylpyruvate domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019962929.1
COORDINATES: protein motif:HMM:NF013757.2
COORDINATES: similar to AA sequence:RefSeq:WP_017939004.1
COORDINATES: similar to AA sequence:RefSeq:WP_020041219.1
COORDINATES: similar to AA sequence:RefSeq:WP_013540740.1
COORDINATES: similar to AA sequence:RefSeq:WP_019995611.1
COORDINATES: similar to AA sequence:RefSeq:WP_016882543.1
aromatic acid/H+ symport family MFS transporter
COORDINATES: protein motif:HMM:NF012242.2
COORDINATES: similar to AA sequence:RefSeq:WP_002724863.1
PLP-dependent aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011331271.1
nuclear transport factor 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010396018.1
COORDINATES: similar to AA sequence:RefSeq:WP_009340632.1
GO:0050487 - sulfoacetaldehyde acetyltransferase activity [Evidence IEA]
GO:0019529 - taurine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011747340.1
putative sulfate exporter family transporter
COORDINATES: similar to AA sequence:RefSeq:WP_018063692.1
GO:0008959 - phosphate acetyltransferase activity [Evidence IEA]
GO:0006086 - acetyl-CoA biosynthetic process from pyruvate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011299878.1
COORDINATES: similar to AA sequence:RefSeq:WP_019998835.1
COORDINATES: similar to AA sequence:RefSeq:WP_006350228.1
COORDINATES: similar to AA sequence:RefSeq:WP_007010742.1
COORDINATES: similar to AA sequence:RefSeq:WP_015623585.1
COORDINATES: similar to AA sequence:RefSeq:WP_019998839.1
COORDINATES: similar to AA sequence:RefSeq:WP_008029367.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611129.1
COORDINATES: similar to AA sequence:RefSeq:WP_010926063.1
COORDINATES: similar to AA sequence:RefSeq:WP_018182781.1
COORDINATES: similar to AA sequence:RefSeq:WP_012355476.1
ankyrin repeat domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008093521.1
COORDINATES: similar to AA sequence:RefSeq:WP_019955040.1
COORDINATES: similar to AA sequence:RefSeq:WP_011455736.1
COORDINATES: similar to AA sequence:RefSeq:WP_018239998.1
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020049246.1
glutathione S-transferase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018098767.1
COORDINATES: similar to AA sequence:RefSeq:WP_011750591.1
COORDINATES: similar to AA sequence:RefSeq:WP_011750743.1
COORDINATES: similar to AA sequence:RefSeq:WP_017929093.1
COORDINATES: similar to AA sequence:RefSeq:WP_018000607.1
COORDINATES: similar to AA sequence:RefSeq:WP_017998116.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001621.1
COORDINATES: similar to AA sequence:RefSeq:WP_011748012.1
COORDINATES: similar to AA sequence:RefSeq:WP_008283023.1
COORDINATES: similar to AA sequence:RefSeq:WP_020397477.1
COORDINATES: similar to AA sequence:RefSeq:WP_008936608.1
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_002723937.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001627.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016614 - oxidoreductase activity, acting on CH-OH group of donors [Evidence IEA]
GMC family oxidoreductase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018000777.1
COORDINATES: similar to AA sequence:RefSeq:WP_018000778.1
COORDINATES: similar to AA sequence:RefSeq:WP_009809078.1
GO:0009325 - nitrate reductase complex [Evidence IEA]
GO:0008940 - nitrate reductase activity [Evidence IEA]
GO:0009061 - anaerobic respiration [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010397504.1
COORDINATES: similar to AA sequence:RefSeq:WP_018000781.1
GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051131 - chaperone-mediated protein complex assembly [Evidence IEA]
nitrate reductase molybdenum cofactor assembly chaperone
COORDINATES: similar to AA sequence:RefSeq:WP_018000782.1
GO:0019645 - anaerobic electron transport chain [Evidence IEA]
respiratory nitrate reductase subunit gamma
COORDINATES: similar to AA sequence:RefSeq:WP_009505378.1
COORDINATES: similar to AA sequence:RefSeq:WP_010660819.1
GO:0015205 - nucleobase transmembrane transporter activity [Evidence IEA]
GO:0015851 - nucleobase transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018001630.1
COORDINATES: similar to AA sequence:RefSeq:WP_019443610.1
3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_011750978.1
alpha-ketoacid dehydrogenase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_004681859.1
dihydrolipoamide acetyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018001634.1
GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0051068 - dihydrolipoamide metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018001304.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_018001305.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001306.1
COORDINATES: similar to AA sequence:RefSeq:WP_009756554.1
COORDINATES: similar to AA sequence:RefSeq:WP_011748627.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001388.1
COORDINATES: similar to AA sequence:RefSeq:WP_017958041.1
GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020009816.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001390.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001194.1
COORDINATES: similar to AA sequence:RefSeq:WP_014130911.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751008.1
COORDINATES: similar to AA sequence:RefSeq:WP_005853622.1
COORDINATES: similar to AA sequence:RefSeq:WP_018000795.1
COORDINATES: similar to AA sequence:RefSeq:WP_008033378.1
bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_020200583.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751350.1
COORDINATES: protein motif:HMM:NF019335.2
secretin and TonB N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011751348.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751347.1
COORDINATES: similar to AA sequence:RefSeq:WP_017999524.1
GO:0008726 - alkanesulfonate monooxygenase activity [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]
FMNH2-dependent alkanesulfonate monooxygenase
COORDINATES: protein motif:HMM:NF019604.2
COORDINATES: similar to AA sequence:RefSeq:WP_017999526.1
COORDINATES: similar to AA sequence:RefSeq:WP_019966444.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]; GO:0005488 - binding [Evidence IEA]
GO:0042918 - alkanesulfonate transport [Evidence IEA]
aliphatic sulfonate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_017999528.1
COORDINATES: similar to AA sequence:RefSeq:WP_017999529.1
COORDINATES: protein motif:HMM:NF013126.2
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
glycoside hydrolase family 3 N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015865579.1
COORDINATES: protein motif:HMM:NF012926.2
COORDINATES: protein motif:HMM:NF033157.1
COORDINATES: similar to AA sequence:RefSeq:WP_011747930.1
GO:0004357 - glutamate-cysteine ligase activity [Evidence IEA]
GO:0042398 - cellular modified amino acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004669892.1
COORDINATES: similar to AA sequence:RefSeq:WP_011747932.1
PAS domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_013894162.1
COORDINATES: similar to AA sequence:RefSeq:WP_009804474.1
COORDINATES: similar to AA sequence:RefSeq:WP_011747465.1
COORDINATES: similar to AA sequence:RefSeq:WP_018000324.1
COORDINATES: similar to AA sequence:RefSeq:WP_011747463.1
COORDINATES: similar to AA sequence:RefSeq:WP_018453930.1
COORDINATES: similar to AA sequence:RefSeq:WP_011747461.1
COORDINATES: similar to AA sequence:RefSeq:WP_018916526.1
COORDINATES: similar to AA sequence:RefSeq:WP_018246386.1
COORDINATES: similar to AA sequence:RefSeq:WP_018000325.1
COORDINATES: similar to AA sequence:RefSeq:WP_018181934.1
COORDINATES: similar to AA sequence:RefSeq:WP_028710025.1
COORDINATES: similar to AA sequence:RefSeq:WP_009502582.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011749831.1
TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
IS66 family insertion sequence element accessory protein TnpB
COORDINATES: similar to AA sequence:RefSeq:WP_008554852.1
COORDINATES: similar to AA sequence:RefSeq:WP_007855124.1
GO:0008776 - acetate kinase activity [Evidence IEA]
GO:0006083 - acetate metabolic process [Evidence IEA]; GO:0006113 - fermentation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010652814.1
GO:0016746 - acyltransferase activity [Evidence IEA]
bifunctional enoyl-CoA hydratase/phosphate acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_018001285.1
COORDINATES: similar to AA sequence:RefSeq:WP_002723667.1
COORDINATES: similar to AA sequence:RefSeq:WP_002723666.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001288.1
GO:0003987 - acetate-CoA ligase activity [Evidence IEA]
GO:0019427 - acetyl-CoA biosynthetic process from acetate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010397594.1
COORDINATES: similar to AA sequence:RefSeq:WP_011750404.1
GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018001291.1
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018001292.1
COORDINATES: similar to AA sequence:RefSeq:WP_011750407.1
COORDINATES: similar to AA sequence:RefSeq:WP_014329271.1
COORDINATES: similar to AA sequence:RefSeq:WP_010397581.1
COORDINATES: similar to AA sequence:RefSeq:WP_017967989.1
sugar ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011539368.1
GO:0033739 - preQ1 synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011751167.1
COORDINATES: similar to AA sequence:RefSeq:WP_010395437.1
COORDINATES: protein motif:HMM:NF024758.2
trypsin-like peptidase domain-containing protein
COORDINATES: protein motif:HMM:NF014667.2
COORDINATES: similar to AA sequence:RefSeq:WP_011911086.1
GO:0008767 - UDP-galactopyranose mutase activity [Evidence IEA]
GO:0009273 - peptidoglycan-based cell wall biogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018001299.1
GO:0009279 - cell outer membrane [Evidence IEA]
GO:0015288 - porin activity [Evidence IEA]
efflux transporter outer membrane subunit
COORDINATES: similar to AA sequence:RefSeq:WP_018001300.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001301.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001302.1
COORDINATES: similar to AA sequence:RefSeq:WP_011747991.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008974 - phosphoribulokinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011747990.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001119.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001179.1
flagellar hook capping FlgD N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF014207.2
flagellar hook-length control protein FliK
COORDINATES: similar to AA sequence:RefSeq:WP_011457318.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001182.1
COORDINATES: similar to AA sequence:RefSeq:WP_009565008.1
GO:0005198 - structural molecule activity [Evidence IEA]
GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
COORDINATES: protein motif:HMM:NF009435.1
GO:0044781 - bacterial-type flagellum organization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009810213.1
COORDINATES: similar to AA sequence:RefSeq:WP_011747916.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611526.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611681.1
COORDINATES: similar to AA sequence:RefSeq:WP_011540540.1
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011841962.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001445.1
COORDINATES: similar to AA sequence:RefSeq:WP_010396598.1
sugar ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_018001447.1
COORDINATES: similar to AA sequence:RefSeq:WP_011750987.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001449.1
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_017999704.1
COORDINATES: similar to AA sequence:RefSeq:WP_028713484.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012573.2
COORDINATES: protein motif:HMM:NF013677.2
TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase.; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_076611774.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010394569.1
COORDINATES: similar to AA sequence:RefSeq:WP_011750967.1
COORDINATES: similar to AA sequence:RefSeq:WP_010394573.1
glycine betaine/L-proline ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_010394576.1
glycine betaine ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_010394578.1
COORDINATES: similar to AA sequence:RefSeq:WP_011750971.1
COORDINATES: similar to AA sequence:RefSeq:WP_011750972.1
COORDINATES: similar to AA sequence:RefSeq:WP_010440537.1
dihydrodipicolinate synthase family protein
COORDINATES: protein motif:HMM:NF036525.2
COORDINATES: similar to AA sequence:RefSeq:WP_018000605.1
COORDINATES: similar to AA sequence:RefSeq:WP_011750505.1
COORDINATES: similar to AA sequence:RefSeq:WP_018000603.1
COORDINATES: similar to AA sequence:RefSeq:WP_011747345.1
COORDINATES: similar to AA sequence:RefSeq:WP_011747344.1
COORDINATES: similar to AA sequence:RefSeq:WP_011747343.1
COORDINATES: similar to AA sequence:RefSeq:WP_011747342.1
COORDINATES: similar to AA sequence:RefSeq:WP_018000894.1
COORDINATES: similar to AA sequence:RefSeq:WP_011750508.1
COORDINATES: similar to AA sequence:RefSeq:WP_018000896.1
COORDINATES: similar to AA sequence:RefSeq:WP_018000897.1
COORDINATES: similar to AA sequence:RefSeq:WP_018000898.1
COORDINATES: similar to AA sequence:RefSeq:WP_011750512.1
COORDINATES: similar to AA sequence:RefSeq:WP_011750513.1
COORDINATES: similar to AA sequence:RefSeq:WP_018000901.1
COORDINATES: similar to AA sequence:RefSeq:WP_009178589.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611592.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001245.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001244.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001243.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001242.1
COORDINATES: similar to AA sequence:RefSeq:WP_015635975.1
COORDINATES: similar to AA sequence:RefSeq:WP_016654819.1
GO:0003871 - 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0009086 - methionine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007792467.1
COORDINATES: similar to AA sequence:RefSeq:WP_011047294.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004329 - formate-tetrahydrofolate ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008228106.1
GO:0004488 - methylenetetrahydrofolate dehydrogenase (NADP+) activity [Evidence IEA]
bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD
COORDINATES: similar to AA sequence:RefSeq:WP_018001678.1
COORDINATES: similar to AA sequence:RefSeq:WP_010972361.1
NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_018001199.1
sigma-54 dependent transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_018001200.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001201.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001202.1
COORDINATES: similar to AA sequence:RefSeq:WP_020499096.1
GO:0020037 - heme binding [Evidence IEA]; GO:0004601 - peroxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008828673.1
COORDINATES: similar to AA sequence:RefSeq:WP_018001192.1
GO:0016682 - oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor [Evidence IEA]
cytochrome d ubiquinol oxidase subunit II
COORDINATES: similar to AA sequence:RefSeq:WP_018001193.1
COORDINATES: similar to AA sequence:RefSeq:WP_011750243.1
COORDINATES: similar to AA sequence:RefSeq:WP_014332177.1
COORDINATES: protein motif:HMM:NF014757.2
GO:0070403 - NAD+ binding [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
COORDINATES: protein motif:HMM:NF012928.2
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
3-hydroxyacyl-CoA dehydrogenase family protein
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: similar to AA sequence:RefSeq:WP_076611977.1
COORDINATES: similar to AA sequence:RefSeq:WP_019904767.1
COORDINATES: similar to AA sequence:RefSeq:WP_006815187.1
CstA-like transporter-associated (seleno)protein
COORDINATES: similar to AA sequence:RefSeq:WP_020952385.1
COORDINATES: protein motif:HMM:NF012791.2
COORDINATES: protein motif:HMM:NF015995.2
COORDINATES: protein motif:HMM:NF014126.2
GO:0071705 - nitrogen compound transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF038133.1
choice-of-anchor L domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015772950.1
COORDINATES: protein motif:HMM:NF024629.2
COORDINATES: similar to AA sequence:RefSeq:WP_006621359.1
COORDINATES: protein motif:HMM:NF016060.2
GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_076611978.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_017997123.1
COORDINATES: similar to AA sequence:RefSeq:WP_005631403.1
phospholipase D-like domain-containing protein
COORDINATES: protein motif:HMM:NF025605.2
TetR/AcrR family transcriptional regulator C-terminal domain-containing protein
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
COORDINATES: similar to AA sequence:RefSeq:WP_008510413.1
GO:0003985 - acetyl-CoA C-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002968376.1
COORDINATES: similar to AA sequence:RefSeq:WP_018000628.1
COORDINATES: similar to AA sequence:RefSeq:WP_018000629.1
type II toxin-antitoxin system VapC family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_011940001.1
AbrB/MazE/SpoVT family DNA-binding domain-containing protein