Paracoccus alcaliphilus strain TK 1015 = DSM 8512 plasmid p305818, complete sequence.
Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Paracoccaceae; Paracoccus.
Biogeographic distribution of Paracoccus
Submitted (05-JAN-2021) Genomic and Applied Microbiology & Goettingen Genomics Laboratory, Georg-August-University Goettingen, Grisebachstr. 8, Goettingen, Lower Saxony 37077, Germany
REFSEQ INFORMATION: The reference sequence is identical to\nCP067127.1.\nBacteria and source DNA available from Prof. Dr. Thorsten\nBrinkhoff, ICMB, University Oldenburg.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 26-NOV-2020\nAssembly Method :: Unicycler v. 0.4.8\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 148.0x\nSequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/09/2023 17:10:06\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,800\nCDSs (total) :: 4,744\nGenes (coding) :: 4,523\nCDSs (with protein) :: 4,523\nGenes (RNA) :: 56\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 47\nncRNAs :: 3\nPseudo Genes (total) :: 221\nCDSs (without protein) :: 221\nPseudo Genes (ambiguous residues) :: 0 of 221\nPseudo Genes (frameshifted) :: 75 of 221\nPseudo Genes (incomplete) :: 180 of 221\nPseudo Genes (internal stop) :: 34 of 221\nPseudo Genes (multiple problems) :: 61 of 221\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_018065894.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010396953.1
COORDINATES: similar to AA sequence:RefSeq:WP_005859462.1
COORDINATES: similar to AA sequence:RefSeq:WP_004335781.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
TonB-dependent receptor plug domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003088238.1
COORDINATES: similar to AA sequence:RefSeq:WP_011751333.1
esterase-like activity of phytase family protein
COORDINATES: protein motif:HMM:NF016145.2
polysaccharide pyruvyl transferase family protein
COORDINATES: protein motif:HMM:NF024967.2
COORDINATES: similar to AA sequence:RefSeq:WP_009564387.1
GO:0051907 - S-(hydroxymethyl)glutathione synthase activity [Evidence IEA]
GO:0046292 - formaldehyde metabolic process [Evidence IEA]
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_013525295.1
COORDINATES: similar to AA sequence:RefSeq:WP_013525296.1
beta-ketoacyl synthase N-terminal-like domain-containing protein
COORDINATES: protein motif:HMM:NF021456.2
COORDINATES: similar to AA sequence:RefSeq:WP_007799521.1
COORDINATES: protein motif:HMM:TIGR03363.1
COORDINATES: similar to AA sequence:RefSeq:WP_002724310.1
GO:0003674 - molecular_function [Evidence IEA]
GO:0033103 - protein secretion by the type VI secretion system [Evidence IEA]
type VI secretion system contractile sheath small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_008839887.1
GO:0033104 - type VI protein secretion system complex [Evidence IEA]
type VI secretion system contractile sheath large subunit
COORDINATES: protein motif:HMM:NF017454.2
type VI secretion system tube protein Hcp
COORDINATES: similar to AA sequence:RefSeq:WP_002724314.1
type VI secretion system baseplate subunit TssE
COORDINATES: similar to AA sequence:RefSeq:WP_006204796.1
type VI secretion system baseplate subunit TssF
COORDINATES: protein motif:HMM:TIGR03347.1
type VI secretion system baseplate subunit TssG
COORDINATES: protein motif:HMM:TIGR03354.1
type VI secretion system-associated FHA domain protein TagH
COORDINATES: similar to AA sequence:RefSeq:WP_007799498.1
type VI secretion system lipoprotein TssJ
COORDINATES: similar to AA sequence:RefSeq:WP_006204791.1
type VI secretion system baseplate subunit TssK
COORDINATES: similar to AA sequence:RefSeq:WP_002724321.1
type IVB secretion system protein IcmH/DotU
COORDINATES: similar to AA sequence:RefSeq:WP_011842112.1
type VI secretion system membrane subunit TssM
COORDINATES: protein motif:HMM:TIGR03373.1
type VI secretion system-associated protein TagF
COORDINATES: similar to AA sequence:RefSeq:WP_004678717.1
type VI secretion system tip protein TssI/VgrG
COORDINATES: protein motif:HMM:NF018470.2
COORDINATES: similar to AA sequence:RefSeq:WP_011339356.1
COORDINATES: similar to AA sequence:RefSeq:WP_007799517.1
protein phosphatase 2C domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009806921.1
COORDINATES: similar to AA sequence:RefSeq:WP_007791732.1
ShlB/FhaC/HecB family hemolysin secretion/activation protein
COORDINATES: protein motif:HMM:NF017658.2
COORDINATES: similar to AA sequence:RefSeq:WP_011748742.1
COORDINATES: protein motif:HMM:NF012298.2
COORDINATES: similar to AA sequence:RefSeq:WP_007799480.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007800917.1
NAD-dependent succinate-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_014879384.1
aspartate aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007197409.1
Lrp/AsnC family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_007068051.1
hydroxyectoine utilization dehydratase EutB
COORDINATES: similar to AA sequence:RefSeq:WP_007800914.1
COORDINATES: similar to AA sequence:RefSeq:WP_009506016.1
GO:0042400 - ectoine catabolic process [Evidence IEA]
DoeA (degradation of ectoine A) is also called EutD (ectoine utilization D); Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008193305.1
N(2)-acetyl-L-2,4-diaminobutanoate deacetylase DoeB
COORDINATES: protein motif:HMM:NF020137.2
COORDINATES: similar to AA sequence:RefSeq:WP_020048502.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013831375.1
COORDINATES: protein motif:HMM:NF012360.2
COORDINATES: similar to AA sequence:RefSeq:WP_012333234.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007558758.1
COORDINATES: similar to AA sequence:RefSeq:WP_007558760.1
COORDINATES: similar to AA sequence:RefSeq:WP_018859500.1
GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]
LLM class flavin-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_011910489.1
COORDINATES: similar to AA sequence:RefSeq:WP_006727844.1
COORDINATES: similar to AA sequence:RefSeq:WP_011842841.1
sigma-54-dependent Fis family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_009605786.1
alcohol dehydrogenase catalytic domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013383134.1
transporter substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016348179.1
amino acid ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_018262021.1
COORDINATES: similar to AA sequence:RefSeq:WP_012331612.1
COORDINATES: similar to AA sequence:RefSeq:WP_017968455.1
GO:0008678 - 2-deoxy-D-gluconate 3-dehydrogenase activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0000272 - polysaccharide catabolic process [Evidence IEA]
2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD
COORDINATES: similar to AA sequence:RefSeq:WP_011428253.1
GO:0008697 - 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity [Evidence IEA]
GO:0045490 - pectin catabolic process [Evidence IEA]
5-dehydro-4-deoxy-D-glucuronate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_014538113.1
COORDINATES: similar to AA sequence:RefSeq:WP_011000796.1
GO:0004803 - transposase activity [Evidence IEA]
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008219968.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0003979 - UDP-glucose 6-dehydrogenase activity [Evidence IEA]
GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012744.2
COORDINATES: protein motif:HMM:NF020459.2
COORDINATES: similar to AA sequence:RefSeq:WP_011748008.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
branched-chain amino acid ABC transporter permease
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012067080.1
COORDINATES: similar to AA sequence:RefSeq:WP_017929958.1
ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:NF013166.2
COORDINATES: similar to AA sequence:RefSeq:WP_006370451.1
COORDINATES: protein motif:HMM:TIGR01733.1
amino acid adenylation domain-containing protein
COORDINATES: protein motif:HMM:NF012873.2
COORDINATES: protein motif:HMM:NF004282.0
GO:0031177 - phosphopantetheine binding [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
non-ribosomal peptide synthase/polyketide synthase
COORDINATES: protein motif:HMM:NF012869.2
COORDINATES: similar to AA sequence:RefSeq:WP_012484562.1
GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015437.2
COORDINATES: similar to AA sequence:RefSeq:WP_008334862.1
COORDINATES: protein motif:HMM:TIGR01730.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011749356.1
COORDINATES: similar to AA sequence:RefSeq:WP_011749355.1
COORDINATES: similar to AA sequence:RefSeq:WP_007767992.1
COORDINATES: similar to AA sequence:RefSeq:WP_011749647.1
twin-arginine translocation pathway signal
COORDINATES: similar to AA sequence:RefSeq:WP_011749648.1
ferric reductase-like transmembrane domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015007508.1
COORDINATES: similar to AA sequence:RefSeq:WP_010394699.1
COORDINATES: protein motif:HMM:NF012993.2
nitrilase-related carbon-nitrogen hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_043766072.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011750743.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_009178563.1
COORDINATES: similar to AA sequence:RefSeq:WP_011749388.1
COORDINATES: similar to AA sequence:RefSeq:WP_013383469.1
COORDINATES: protein motif:HMM:NF019349.2
COORDINATES: protein motif:HMM:NF014653.2
COORDINATES: similar to AA sequence:RefSeq:WP_010686491.1
isocitrate/isopropylmalate dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008353061.1
COORDINATES: similar to AA sequence:RefSeq:WP_014130527.1
tripartite tricarboxylate transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_005861844.1
tripartite tricarboxylate transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_014130529.1
COORDINATES: similar to AA sequence:RefSeq:WP_019963497.1
tricarballylate utilization 4Fe-4S protein TcuB
COORDINATES: similar to AA sequence:RefSeq:WP_019963496.1
FAD-dependent tricarballylate dehydrogenase TcuA
COORDINATES: similar to AA sequence:RefSeq:WP_019963495.1
COORDINATES: similar to AA sequence:RefSeq:WP_009572516.1
COORDINATES: similar to AA sequence:RefSeq:WP_017846391.1
D-2-hydroxyacid dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019963490.1
COORDINATES: similar to AA sequence:RefSeq:WP_013651296.1
COORDINATES: protein motif:HMM:NF020110.2
COORDINATES: similar to AA sequence:RefSeq:WP_009449226.1
ABC-F family ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012111292.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018209703.1
glutathione S-transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017998445.1
phytanoyl-CoA dioxygenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018690303.1
acetyl-CoA hydrolase/transferase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018690302.1
GO:0070403 - NAD+ binding [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008332057.1
COORDINATES: similar to AA sequence:RefSeq:WP_010336637.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611945.1
COORDINATES: similar to AA sequence:RefSeq:WP_017998790.1
COORDINATES: protein motif:HMM:TIGR01783.1
GO:0019867 - outer membrane [Evidence IEA]
GO:0015343 - siderophore-iron transmembrane transporter activity [Evidence IEA]
GO:0015891 - siderophore transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012371.2
serine hydrolase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011747925.1
COORDINATES: similar to AA sequence:RefSeq:WP_011747926.1
COORDINATES: protein motif:HMM:NF016648.2
COORDINATES: protein motif:HMM:NF019335.2
COORDINATES: protein motif:HMM:NF012801.2
COORDINATES: similar to AA sequence:RefSeq:WP_008125341.1
COORDINATES: similar to AA sequence:RefSeq:WP_018098188.1
COORDINATES: similar to AA sequence:RefSeq:WP_011750803.1
helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF015925.2
COORDINATES: similar to AA sequence:RefSeq:WP_010660989.1
COORDINATES: similar to AA sequence:RefSeq:WP_018425613.1
COORDINATES: similar to AA sequence:RefSeq:WP_012251305.1
COORDINATES: similar to AA sequence:RefSeq:WP_006226162.1
COORDINATES: similar to AA sequence:RefSeq:WP_009337052.1
carboxymuconolactone decarboxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_020607869.1
GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF015431.2
COORDINATES: similar to AA sequence:RefSeq:WP_003265228.1
COORDINATES: similar to AA sequence:RefSeq:WP_014115422.1
GO:0006750 - glutathione biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014683.2
GO:0005886 - plasma membrane [Evidence IEA]
GO:0015129 - lactate transmembrane transporter activity [Evidence IEA]
GO:0015727 - lactate transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012791.2
COORDINATES: similar to AA sequence:RefSeq:WP_011871847.1
COORDINATES: similar to AA sequence:RefSeq:WP_014531491.1
COORDINATES: similar to AA sequence:RefSeq:WP_018634426.1
xanthine dehydrogenase family protein molybdopterin-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_010394751.1
COORDINATES: similar to AA sequence:RefSeq:WP_007628037.1
COORDINATES: similar to AA sequence:RefSeq:WP_006224156.1
COORDINATES: similar to AA sequence:RefSeq:WP_003544767.1
COORDINATES: similar to AA sequence:RefSeq:WP_003569836.1
COORDINATES: similar to AA sequence:RefSeq:WP_008872847.1
COORDINATES: similar to AA sequence:RefSeq:WP_011746432.1
COORDINATES: similar to AA sequence:RefSeq:WP_011746431.1
COORDINATES: similar to AA sequence:RefSeq:WP_012112897.1
COORDINATES: similar to AA sequence:RefSeq:WP_010400456.1
GO:0008490 - arsenite secondary active transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011746562.1
GO:0008794 - arsenate reductase (glutaredoxin) activity [Evidence IEA]
This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite, after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell, providing resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011746563.1
COORDINATES: similar to AA sequence:RefSeq:WP_007693121.1
COORDINATES: protein motif:HMM:NF013088.2
COORDINATES: similar to AA sequence:RefSeq:WP_010657675.1
PhzF family phenazine biosynthesis protein
COORDINATES: similar to AA sequence:RefSeq:WP_016715702.1
COORDINATES: similar to AA sequence:RefSeq:WP_007119203.1
COORDINATES: protein motif:HMM:NF024242.2
COORDINATES: similar to AA sequence:RefSeq:WP_012253878.1
zinc-dependent alcohol dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013360183.1
COORDINATES: protein motif:HMM:NF024989.2
COORDINATES: similar to AA sequence:RefSeq:WP_011750792.1
COORDINATES: similar to AA sequence:RefSeq:WP_009340074.1
COORDINATES: similar to AA sequence:RefSeq:WP_002964979.1
COORDINATES: similar to AA sequence:RefSeq:WP_006090185.1
COORDINATES: similar to AA sequence:RefSeq:WP_004685219.1
winged helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_076611339.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_076611946.1
IS5-like element ISPpa3 family transposase
COORDINATES: protein motif:HMM:NF013593.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008553564.1
COORDINATES: similar to AA sequence:RefSeq:WP_012225768.1
COORDINATES: similar to AA sequence:RefSeq:WP_010188285.1
COORDINATES: similar to AA sequence:RefSeq:WP_076612067.1
GO:0015074 - DNA integration [Evidence IEA]
integrase core domain-containing protein
COORDINATES: nucleotide motif:Rfam:14.4:RF03058
sul1 is cis-regulatory element that is thought to sense ions involved in sulfur or methionine metabolism; They are found in Alphaproteobacteria; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_007607815.1
COORDINATES: protein motif:HMM:NF033550.5
COORDINATES: similar to AA sequence:RefSeq:WP_076611917.1
IS256-like element ISPpa1 family transposase
COORDINATES: similar to AA sequence:RefSeq:WP_010205272.1
COORDINATES: similar to AA sequence:RefSeq:WP_014909044.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611844.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018083854.1
COORDINATES: similar to AA sequence:RefSeq:WP_007439005.1
COORDINATES: protein motif:HMM:NF015527.2
GO:0008146 - sulfotransferase activity [Evidence IEA]
sulfotransferase family 2 domain-containing protein
COORDINATES: protein motif:HMM:NF024860.2
COORDINATES: protein motif:HMM:NF024831.2
COORDINATES: protein motif:HMM:NF040354.1
COORDINATES: similar to AA sequence:RefSeq:WP_009817026.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014889414.1
COORDINATES: similar to AA sequence:RefSeq:WP_028714619.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF033580.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611110.1
COORDINATES: similar to AA sequence:RefSeq:WP_011046914.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0009374 - biotin binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004736 - pyruvate carboxylase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0006090 - pyruvate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_076611527.1
DDE-type integrase/transposase/recombinase
COORDINATES: protein motif:HMM:NF024673.2
COORDINATES: similar to AA sequence:RefSeq:WP_008887936.1
COORDINATES: protein motif:HMM:NF033542.1
COORDINATES: similar to AA sequence:RefSeq:WP_012332941.1
COORDINATES: similar to AA sequence:RefSeq:WP_007765704.1
COORDINATES: similar to AA sequence:RefSeq:WP_007885476.1
COORDINATES: similar to AA sequence:RefSeq:WP_009491434.1
COORDINATES: similar to AA sequence:RefSeq:WP_007765701.1
COORDINATES: similar to AA sequence:RefSeq:WP_018389200.1
COORDINATES: similar to AA sequence:RefSeq:WP_007765699.1
GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO:0009052 - pentose-phosphate shunt, non-oxidative branch [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007885481.1
FadR/GntR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011909670.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013984606.1
type II toxin-antitoxin system CcdA family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_007400721.1