Lentilactobacillus kefiri strain DH5 plasmid pDH5, complete sequence.
type: Entry
definition: Lentilactobacillus kefiri strain DH5 plasmid pDH5, complete sequence.
sequence version: NZ_CP029972.1
sequence date: 2022-10-24
sequence: sequence
division: CON
label: NZ_CP029972.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN09381536
keyword: RefSeq
source: Lentilactobacillus kefiri
organism: Lentilactobacillus kefiri
taxonomy: Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Lentilactobacillus.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP029972.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\nThis genome has a base modification file available.\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 03-MAR-2018\nAssembly Method :: de novo v. March-2018\nAssembly Name :: HGAP3\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 277.0x\nSequencing Technology :: PacBio; Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 10/24/2022 01:56:19\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 2,426\nCDSs (total) :: 2,347\nGenes (coding) :: 2,297\nCDSs (with protein) :: 2,297\nGenes (RNA) :: 79\nrRNAs :: 5, 5, 5 (5S, 16S, 23S)\ncomplete rRNAs :: 5, 5, 5 (5S, 16S, 23S)\ntRNAs :: 61\nncRNAs :: 3\nPseudo Genes (total) :: 50\nCDSs (without protein) :: 50\nPseudo Genes (ambiguous residues) :: 0 of 50\nPseudo Genes (frameshifted) :: 18 of 50\nPseudo Genes (incomplete) :: 26 of 50\nPseudo Genes (internal stop) :: 11 of 50\nPseudo Genes (multiple problems) :: 5 of 50\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 67759
topology: circular
so has quality: SO_0000988
location: 1..67759
location: region:1-67759:1
RO_0002162: 33962

NZ_CP029972
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN09381536
type: BioSample
SIO_000068: biosample

1
title: Genome sequence of Lactobacillus kefiri DH5 isolated from kefir
author: Kim, D.-H.
author: Seo, K.-H.
journal: Unpublished

2
title: Direct Submission
author: Kim, D.-H.
author: Seo, K.-H.
journal: Submitted (08-JUN-2018) Center for One Health, Konkuk University, 120 Neungdong-ro, Kwangjin-gu, Seoul 05079, Korea, Republic of

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67759:1
position: 67759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-67759:1:source
so part of: sequence
organism: Lentilactobacillus kefiri
mol type: genomic DNA
strain: DH5
isolation source: Korean kefir
plasmid: pDH5
country: South Korea: Seoul
collection date: 2014-01-17

33962
type: Taxonomy
SIO_000068: taxonomy

DNL43_RS11610
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11610
old locus tag: DNL43_11730
so part of: sequence
location: complement(join(67437..67759,1..451))
location: region:1-67759:-1
so has part: feature:1-451:-1:exon
so has part: feature:67437-67759:-1:exon
subclass of: SO_0000010

71568163
type: Gene
SIO_000068: ncbigene

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67759:-1
position: 67759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-451:-1:exon

position:451:-1
position: 451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:67437-67759:-1:exon

position:67437:-1
position: 67437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DNL43_RS11610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11610
old locus tag: DNL43_11730
EC number: 1.1.1.304
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017867767.1
GO function: GO:0019152 - acetoin dehydrogenase activity [Evidence IEA]
GO process: GO:0045150 - acetoin catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: (S)-acetoin forming diacetyl reductase
translation: MAEKVALVTGSGQGIGEAIATRLHEDGFKVAVADLNIDNANKVAAKLSPDGSQAIGVKVDVSDRDSVFSAVNETVDKLGGFDVIVNNAGLGPTTPLDTITPDQFRLIYGVNVGGVLWGAQAAHQAFKKLGHGGKIINATSQAGVVGNPNLALYSGTKFAVRGITQVLARDLAEEGITANAYAPGIVKTPMMFDIAHQVGKNAGKDDEWGMQQFAKDIALKRLSEPEDVAAAVSFLAGKDSNYITGQTIIVDGGMQFH
SIO_010081: DNL43_RS11610
subclass of: SO_0000673
so part of: DNL43_RS11610
location: complement(join(67437..67759,1..451))
location: region:1-67759:-1
so has part: feature:1-451:-1:exon
so has part: feature:67437-67759:-1:exon

WP_054769856.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-451:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:67437-67759:-1:exon

DNL43_RS11615
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11615
old locus tag: DNL43_11735
so part of: sequence
location: complement(608..973)
location: region:608-973:-1
so has part: feature:608-973:-1:exon
subclass of: SO_0000010

71568164
type: Gene
SIO_000068: ncbigene

position:608:-1
position: 608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:973:-1
position: 973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:608-973:-1:exon

DNL43_RS11615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11615
old locus tag: DNL43_11735
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003553346.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF5839 family protein
translation: MNQGHRIETVINGHHVNKNHYFSLKSYQWRVRHHKTVGKKNLAIGQLAWVEVTGQPKPVLVIITGIHTLTEPADRQVARQLKTVKTITTNSVKDLDAITQNNFEQYLATHLQGDPFYQPQQ
SIO_010081: DNL43_RS11615
subclass of: SO_0000673
so part of: DNL43_RS11615
location: complement(608..973)
location: region:608-973:-1
so has part: feature:608-973:-1:exon

WP_156645081.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:608-973:-1:exon

DNL43_RS11620
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11620
old locus tag: DNL43_11740
so part of: sequence
location: 1471..2109
location: region:1471-2109:1
so has part: feature:1471-2109:1:exon
subclass of: SO_0000010

71568165
type: Gene
SIO_000068: ncbigene

position:1471:1
position: 1471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2109:1
position: 2109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1471-2109:1:exon

DNL43_RS11620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11620
old locus tag: DNL43_11740
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003554887.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MTKIGYARVSTREQNLARQIEQLQAAGVTKLFQEKLSGKNAARPQLQAMLDYLRDDDEVIVLSLDRLGRNSADLTEIMEAIRHKGATLNILNLPSFNSIEDPNLRNLITNIIIELYKYMAQEERETIKVRQRQGIEIAKRQGKYHGKVREYGPHSPNRQKRYIYKEACRLLTRRERGEELTKRQIARMLGIAPVTLYRIEKYRAEDQIKAAN
SIO_010081: DNL43_RS11620
subclass of: SO_0000673
so part of: DNL43_RS11620
location: 1471..2109
location: region:1471-2109:1
so has part: feature:1471-2109:1:exon

WP_054769858.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1471-2109:1:exon

DNL43_RS11625
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11625
old locus tag: DNL43_11745
so part of: sequence
location: 2201..2695
location: region:2201-2695:1
so has part: feature:2201-2695:1:exon
subclass of: SO_0000010

71568166
type: Gene
SIO_000068: ncbigene

position:2201:1
position: 2201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2695:1
position: 2695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2201-2695:1:exon

DNL43_RS11625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11625
old locus tag: DNL43_11745
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTKLWCAKIQLTTKQRTYRFSNDLQLALNQTAHPQQILQALIVVPLAPYTDKQQPPMGVGKIQKIYKMAWFKTRGLPITRGQLMGAAYWTERPYVQVAGYLTHNYVWWSQQQISKDITYWQRQFYHQTAYHSLLWRKITNWRIRRQLGRIKRQRWKKNIQYWHI
SIO_010081: DNL43_RS11625
subclass of: SO_0000673
so part of: DNL43_RS11625
location: 2201..2695
location: region:2201-2695:1
so has part: feature:2201-2695:1:exon

WP_054769859.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2201-2695:1:exon

DNL43_RS11635
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11635
old locus tag: DNL43_11755
so part of: sequence
location: complement(3401..3871)
location: region:3401-3871:-1
so has part: feature:3401-3871:-1:exon
subclass of: SO_0000010

71568168
type: Gene
SIO_000068: ncbigene

position:3401:-1
position: 3401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3871:-1
position: 3871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3401-3871:-1:exon

DNL43_RS11635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11635
old locus tag: DNL43_11755
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSDIQDRHLSYQLQLRDPQRYRSCELYLSIKGIKSINHTIRDRLRSLTNYSIISGKPVSKLQKINRLRTAIKYPDLGGFSIVAKTNNYRTYSHQLPMNNLSDYQKQHQMLLNLGYSSKLRRAIILNFSGVKQLKFNQVKVFAVPFNNRYTKKYRL
SIO_010081: DNL43_RS11635
subclass of: SO_0000673
so part of: DNL43_RS11635
location: complement(3401..3871)
location: region:3401-3871:-1
so has part: feature:3401-3871:-1:exon

WP_095345103.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3401-3871:-1:exon

DNL43_RS11640
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11640
old locus tag: DNL43_11760
so part of: sequence
location: 4153..4952
location: region:4153-4952:1
so has part: feature:4153-4952:1:exon
subclass of: SO_0000010

71568169
type: Gene
SIO_000068: ncbigene

position:4153:1
position: 4153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4952:1
position: 4952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4153-4952:1:exon

DNL43_RS11640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11640
old locus tag: DNL43_11760
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013727908.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MQHFSHHYQSDISRQQFDLIRQDLEASRKRTHPKHIDPYDIFCAMLYVLKNGCTWRDLPADYPKWSTVYYYWMSWSKAPTPDKPALLTQVLKKLSLNRRLRQGRSARTSFVILDAQSIKNTATAENKGYDGGKKISGIKRHLAVDINGFPQAIHITRANITDCDGAIALVTLNLEQFKLVRTMMVDSGYTGQNFANEISSLTSAKVIVVKKNELHQFLVIPQRWLIERSFSWLGNYHRLWRNCERKLNTSLMMVSLAFIRLFLKRY
SIO_010081: DNL43_RS11640
subclass of: SO_0000673
so part of: DNL43_RS11640
location: join(4153..4441,4441..4952)
location: region:4153-4952:1
so has part: feature:4153-4441:1:exon
so has part: feature:4441-4952:1:exon

WP_179286864.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4153-4441:1:exon

position:4441:1
position: 4441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4441-4952:1:exon

DNL43_RS11645
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11645
old locus tag: DNL43_11765
so part of: sequence
location: 4972..5481
location: region:4972-5481:1
so has part: feature:4972-5481:1:exon
subclass of: SO_0000010

71568170
type: Gene
SIO_000068: ncbigene

position:4972:1
position: 4972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5481:1
position: 5481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4972-5481:1:exon

DNL43_RS11645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11645
old locus tag: DNL43_11765
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010490096.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TetR/AcrR family transcriptional regulator
translation: MTKENFQDISITEIAQTAELSRKTFYHSFKNKEAVINYLCDQLFDQYFEQLLQQKPQVGEMMLKTTFDIFLNFWWQKRDLIQLLIRQGLFDHMNEIWQQKAIPRYQQFAAPWHVQGTPTQVNYVMAFQLGGFTNILRVWLGQDQPESPEQIKDLMLLAAQQLADSLNNN
SIO_010081: DNL43_RS11645
subclass of: SO_0000673
so part of: DNL43_RS11645
location: 4972..5481
location: region:4972-5481:1
so has part: feature:4972-5481:1:exon

WP_095347953.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4972-5481:1:exon

DNL43_RS11650
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11650
old locus tag: DNL43_11770
pseudo: true
so part of: sequence
location: complement(5550..>6008)
location: region:5550-6008:-1
so has part: feature:5550-6008:-1:exon
subclass of: SO_0000010

71568171
type: Gene
SIO_000068: ncbigene

position:5550:-1
position: 5550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6008:-1
position: 6008
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5550-6008:-1:exon

DNL43_RS11650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11650
old locus tag: DNL43_11770
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002328814.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: DNL43_RS11650
subclass of: SO_0000673
so part of: DNL43_RS11650
location: complement(5550..>6008)
location: region:5550-6008:-1
so has part: feature:5550-6008:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5550-6008:-1:exon

DNL43_RS11655
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11655
old locus tag: DNL43_11775
so part of: sequence
location: 6392..6640
location: region:6392-6640:1
so has part: feature:6392-6640:1:exon
subclass of: SO_0000010

71568172
type: Gene
SIO_000068: ncbigene

position:6392:1
position: 6392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6640:1
position: 6640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6392-6640:1:exon

DNL43_RS11655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11655
old locus tag: DNL43_11775
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003568375.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GlsB/YeaQ/YmgE family stress response membrane protein
translation: MHWLWVLIIGAIIGAIAGAITSKGKSMGWIANIVAGLVGSSIGEAILGSWGPQLAGMAIIPSIIGAVIVVAVVSFFVGKSKN
SIO_010081: DNL43_RS11655
subclass of: SO_0000673
so part of: DNL43_RS11655
location: 6392..6640
location: region:6392-6640:1
so has part: feature:6392-6640:1:exon

WP_003606447.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6392-6640:1:exon

DNL43_RS11665
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11665
old locus tag: DNL43_11785
so part of: sequence
location: complement(6976..7863)
location: region:6976-7863:-1
so has part: feature:6976-7863:-1:exon
subclass of: SO_0000010

71568173
type: Gene
SIO_000068: ncbigene

position:6976:-1
position: 6976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7863:-1
position: 7863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6976-7863:-1:exon

DNL43_RS11665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11665
old locus tag: DNL43_11785
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003132622.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GRP family sugar transporter
translation: MQGVLLALVPIFAWGSIGLVANKFGGDANQQTLGMTLGAFVFALIVFLFRMPTLTWQIFLIGFIGGLLWAIGQFGQFKSMKYMGVSVASPLSSGSQLVIGGLLGVFAFHEWTKQIQFILGFIAMAVLAVGFYFSAKRDPENAVVEEGRNYTKGLTALTYSTLGYVIYVILFNNLAVLWFNVHFDTLTIILPMSVGMIFGALVMGRFKIKMEKYVYQNMIDGVMFGVGNIFMLMAASAAGDAIAFSFSQLGVIISTIGGILFLGEKKTKKELVYVGIGIVLFVTGAIQLAIVKSKG
SIO_010081: DNL43_RS11665
subclass of: SO_0000673
so part of: DNL43_RS11665
location: complement(6976..7863)
location: region:6976-7863:-1
so has part: feature:6976-7863:-1:exon

WP_095345064.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6976-7863:-1:exon

DNL43_RS11670
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11670
old locus tag: DNL43_11790
pseudo: true
so part of: sequence
location: complement(8058..>8231)
location: region:8058-8231:-1
so has part: feature:8058-8231:-1:exon
subclass of: SO_0000010

71568174
type: Gene
SIO_000068: ncbigene

position:8058:-1
position: 8058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8231:-1
position: 8231
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8058-8231:-1:exon

DNL43_RS11670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11670
old locus tag: DNL43_11790
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020751524.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: DNL43_RS11670
subclass of: SO_0000673
so part of: DNL43_RS11670
location: complement(8058..>8231)
location: region:8058-8231:-1
so has part: feature:8058-8231:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8058-8231:-1:exon

DNL43_RS11675
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11675
old locus tag: DNL43_11795
so part of: sequence
location: 8302..8981
location: region:8302-8981:1
so has part: feature:8302-8981:1:exon
subclass of: SO_0000010

71568175
type: Gene
SIO_000068: ncbigene

position:8302:1
position: 8302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8981:1
position: 8981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8302-8981:1:exon

DNL43_RS11675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11675
old locus tag: DNL43_11795
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012477736.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS6-like element ISS1N family transposase
translation: MNHFKGKQFKKDVIIVAVGYYLRYNLSYREVQELLYDRGINVCHTTIYRWLQEYSKVLYYLWKKKNRQSFYSWKMDETYIKIKGRWHYLYRAIDADGLTLDIWLRKKRDTQAAYAFLKRLHKQFGEPKAIVTDKAPSLGSAFRKLQSVGLYTKTEHRTVKYLNNLIEQDHRPIKRRNKFYQSLRTASSTIKGMETIRGIYKKNRRNGTLFGFSVSTEIKVLMGITA
SIO_010081: DNL43_RS11675
subclass of: SO_0000673
so part of: DNL43_RS11675
location: join(8302..8452,8452..8981)
location: region:8302-8981:1
so has part: feature:8302-8452:1:exon
so has part: feature:8452-8981:1:exon

WP_095345065.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8302-8452:1:exon

position:8452:1
position: 8452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8452-8981:1:exon

DNL43_RS11680
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11680
old locus tag: DNL43_11800
so part of: sequence
location: complement(9262..9711)
location: region:9262-9711:-1
so has part: feature:9262-9711:-1:exon
subclass of: SO_0000010

71568176
type: Gene
SIO_000068: ncbigene

position:9262:-1
position: 9262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9711:-1
position: 9711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9262-9711:-1:exon

DNL43_RS11680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11680
old locus tag: DNL43_11800
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003600575.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cupin domain-containing protein
translation: MLEKSADLRDYGPAPFAPDLKSAALENENYRTTLWTGDHFQITLMAIPAGGGDIGMEIHHGNDQLIYLVAGIGHVKMGKDKDHLTVDQEIHPGESVVVPDNTWHNVINAGKQTMKVFSIYSPVKHQKGTNEATKADAIKQEGPLEGTGE
SIO_010081: DNL43_RS11680
subclass of: SO_0000673
so part of: DNL43_RS11680
location: complement(9262..9711)
location: region:9262-9711:-1
so has part: feature:9262-9711:-1:exon

WP_054769881.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9262-9711:-1:exon

DNL43_RS11685
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11685
old locus tag: DNL43_11805
so part of: sequence
location: complement(10176..10553)
location: region:10176-10553:-1
so has part: feature:10176-10553:-1:exon
subclass of: SO_0000010

71568177
type: Gene
SIO_000068: ncbigene

position:10176:-1
position: 10176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10553:-1
position: 10553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10176-10553:-1:exon

DNL43_RS11685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11685
old locus tag: DNL43_11805
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004271281.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNNPDFSNQRVQQFFDHDYHDRGMVKWQGFYLSDHTAALHQQAAQLKRQVCPKPQQSLPIITRRLAEAYQRDLIDTLQLNVCQLEDPHRLEITTHILGYQEDNVIGDEAQFIPLAAIRHVDYQTN
SIO_010081: DNL43_RS11685
subclass of: SO_0000673
so part of: DNL43_RS11685
location: complement(10176..10553)
location: region:10176-10553:-1
so has part: feature:10176-10553:-1:exon

WP_054769880.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10176-10553:-1:exon

DNL43_RS11690
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11690
old locus tag: DNL43_11810
so part of: sequence
location: complement(10546..10866)
location: region:10546-10866:-1
so has part: feature:10546-10866:-1:exon
subclass of: SO_0000010

71568178
type: Gene
SIO_000068: ncbigene

position:10546:-1
position: 10546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10866:-1
position: 10866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10546-10866:-1:exon

DNL43_RS11690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11690
old locus tag: DNL43_11810
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003645617.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPSDLKLISERMRRLFKPRSQTRYWLQVVNDRYDQCFNFFFNSQRQGERLKSVPLHTLYHYDLNALEELLRSLRQQTNLTIQLVGFVGLKWPSTQKVIQRRRQPFE
SIO_010081: DNL43_RS11690
subclass of: SO_0000673
so part of: DNL43_RS11690
location: complement(10546..10866)
location: region:10546-10866:-1
so has part: feature:10546-10866:-1:exon

WP_054769879.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10546-10866:-1:exon

DNL43_RS11695
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11695
old locus tag: DNL43_11815
pseudo: true
so part of: sequence
location: complement(10859..>11128)
location: region:10859-11128:-1
so has part: feature:10859-11128:-1:exon
subclass of: SO_0000010

71568179
type: Gene
SIO_000068: ncbigene

position:10859:-1
position: 10859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11128:-1
position: 11128
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10859-11128:-1:exon

DNL43_RS11695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11695
old locus tag: DNL43_11815
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014386908.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: excinuclease ABC subunit A
SIO_010081: DNL43_RS11695
subclass of: SO_0000673
so part of: DNL43_RS11695
location: complement(10859..>11128)
location: region:10859-11128:-1
so has part: feature:10859-11128:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10859-11128:-1:exon

DNL43_RS11700
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11700
old locus tag: DNL43_11820
so part of: sequence
location: 11405..12271
location: region:11405-12271:1
so has part: feature:11405-12271:1:exon
subclass of: SO_0000010

71568180
type: Gene
SIO_000068: ncbigene

position:11405:1
position: 11405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12271:1
position: 12271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11405-12271:1:exon

DNL43_RS11700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11700
old locus tag: DNL43_11820
inference: COORDINATES: protein motif:HMM:NF013753.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MLKNGFKLVKVLGPSLHYEPTIWSIRKQKYLCKPSLNCPQTITKVAKVEDVKYHHHISQAIKQRVMMQLTVNESQTDIAKELGISDWTVRRVIFNLDQFFKPNYHWLPRHIAFDDFKSGRFAPSGMSMILMNIENHRTLDIILSRRSRYLRNYFLRYDRSARLAVQTITVDLYTPYRHLIHELFPHTIIIADHFHVVAQAYRALNQIRIKAMNRAGKGTHQWRALKHFWKLILTPAGLLKYDNYWSRHNFGYAQLTDVEVVHRLLSFDDDLSQAYRYYQDLILVVKIR
SIO_010081: DNL43_RS11700
subclass of: SO_0000673
so part of: DNL43_RS11700
location: 11405..12271
location: region:11405-12271:1
so has part: feature:11405-12271:1:exon

WP_263863754.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11405-12271:1:exon

DNL43_RS11705
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11705
old locus tag: DNL43_11825
pseudo: true
so part of: sequence
location: complement(<12256..12606)
location: region:12256-12606:-1
so has part: feature:12256-12606:-1:exon
subclass of: SO_0000010

71568181
type: Gene
SIO_000068: ncbigene

position:12256:-1
position: 12256
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:12606:-1
position: 12606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12256-12606:-1:exon

DNL43_RS11705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11705
old locus tag: DNL43_11825
inference: COORDINATES: similar to AA sequence:RefSeq:WP_050892470.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase family protein
SIO_010081: DNL43_RS11705
subclass of: SO_0000673
so part of: DNL43_RS11705
location: complement(<12256..12606)
location: region:12256-12606:-1
so has part: feature:12256-12606:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12256-12606:-1:exon

DNL43_RS11710
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11710
old locus tag: DNL43_11830
so part of: sequence
location: complement(12810..14159)
location: region:12810-14159:-1
so has part: feature:12810-14159:-1:exon
subclass of: SO_0000010

71568182
type: Gene
SIO_000068: ncbigene

position:12810:-1
position: 12810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14159:-1
position: 14159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12810-14159:-1:exon

DNL43_RS11710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11710
old locus tag: DNL43_11830
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003625174.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-dependent oxidoreductase
translation: MDKFKNIIIGFGKAGKTLAKYLAQHDETVLLIERSKQMYGGTCINVGCLPSKNLIFNGQRGVDFTTAVNKRGEMTRQLRNKNYHMVADEPLATVWDGSARFIDNYVLAVVMSDGTTKKVRGERIFINTGAVPNWPSIPGLEFSQRIFTSKEAMELEKQPKRLAIIGGGYIGLEFAGMFNSFGTHVTIFDQHTRLLEREDPDIATEVVADLTDAGIEIKPATQLTQVKDNGEKVTLYYQQGDQTNTAKFDAVLVAVGRRPNINSLGLENTDIALTSRGAIQVDDHLRTTVQNVWALGDVNGGPMFTYVSLDDFRIIVDQLFDKGDRSTADRMVIPTASFLNPPLANVGLNERQAKSAGYDLQTFKLSVKAIPKARVLEDQRGLYKVIVDQKTHLILGATLYAAEAHETINLIALAMKAKLPYERLRDMIYTHPTMSEALNDLFKTPVVKS
SIO_010081: DNL43_RS11710
subclass of: SO_0000673
so part of: DNL43_RS11710
location: complement(12810..14159)
location: region:12810-14159:-1
so has part: feature:12810-14159:-1:exon

WP_156645083.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12810-14159:-1:exon

DNL43_RS11715
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11715
old locus tag: DNL43_11835
so part of: sequence
location: 14653..14715
location: region:14653-14715:1
so has part: feature:14653-14715:1:exon
subclass of: SO_0000010

71568183
type: Gene
SIO_000068: ncbigene

position:14653:1
position: 14653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14715:1
position: 14715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14653-14715:1:exon

DNL43_RS11715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11715
old locus tag: DNL43_11835
inference: COORDINATES: protein motif:HMM:NF028245.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: putative holin-like toxin
translation: MLLFGTFLIALLSYIDKHHK
SIO_010081: DNL43_RS11715
subclass of: SO_0000673
so part of: DNL43_RS11715
location: 14653..14715
location: region:14653-14715:1
so has part: feature:14653-14715:1:exon

WP_222843308.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14653-14715:1:exon

DNL43_RS11720
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11720
old locus tag: DNL43_11840
so part of: sequence
location: complement(14872..15051)
location: region:14872-15051:-1
so has part: feature:14872-15051:-1:exon
subclass of: SO_0000010

71568184
type: Gene
SIO_000068: ncbigene

position:14872:-1
position: 14872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15051:-1
position: 15051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14872-15051:-1:exon

DNL43_RS11720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11720
old locus tag: DNL43_11840
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007124643.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LtrC-like protein
translation: MQQQVQQARNPQQKSELKNKLNDIHHEITNRTQKQLQAFTEENSSIKQPKSEFDQSLKR
SIO_010081: DNL43_RS11720
subclass of: SO_0000673
so part of: DNL43_RS11720
location: complement(14872..15051)
location: region:14872-15051:-1
so has part: feature:14872-15051:-1:exon

WP_109249237.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14872-15051:-1:exon

DNL43_RS11725
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11725
old locus tag: DNL43_11845
so part of: sequence
location: complement(15108..17168)
location: region:15108-17168:-1
so has part: feature:15108-17168:-1:exon
subclass of: SO_0000010

71568185
type: Gene
SIO_000068: ncbigene

position:15108:-1
position: 15108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17168:-1
position: 17168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15108-17168:-1:exon

DNL43_RS11725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11725
old locus tag: DNL43_11845
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003603791.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobQ family relaxase
translation: MAIFHMSFSNISAGKGRSAIASAAYRSGEELFDDKEGRRYFYARSVMPESFILTPQNAPAWASDREKLWNEVEKNDRKSNSRYAKEFNVALPVELSESEQKELLTKYVQENFVDQGMVADVAIHRDHPDNPHAHVMLTNRPFNPDGSWGLKAKTQYIKDENGKQLLTKSGFPKQRKIWLVDWDKKEKINEWRHNWATSVNQSLAQKNIPDRISEKSFVDQGIQETPTQHEGINSQRKNRKAFNQQVSAQRNAQAKYHNLDEKIRNHEHFDALTDELSFSEKHTISHLSQQLKAYVDLEHLDDKQRMLFNWKNSLLIKHAIGEDVTQQLLTIDQQTTSLAQANQLLNKVVERATKKLYPELNFEQTTAAERRELIKETNSEQTIFKGSELAERLADIRSDLLTQQLLTFTKRPYTSWQLVNQQAQTIEKQLTTVLAKHGHQLDDLKHTDRGILAAYQPNELEFISKAVKDLRVIREVKAVVQTQYDSILTTAFPDSDLDKLETIDKEQIYTAVVYYDPELKPLSADDLSQLQQQPPVVFTSQQHQAGLNYLLGKMELKDIQDHRLQRVLKHDGTRQLFIGECGQDPKLDHKQIEMVQARLKQQTTRFDQYKQDQIKDYQAINYYPTSPQNYLMNILDEALVTILYAKNTDYLRKQQLRGLKETEWAMTKKQRQHQTRNRHEDGGMHL
SIO_010081: DNL43_RS11725
subclass of: SO_0000673
so part of: DNL43_RS11725
location: complement(15108..17168)
location: region:15108-17168:-1
so has part: feature:15108-17168:-1:exon

WP_054769790.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15108-17168:-1:exon

DNL43_RS11730
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11730
old locus tag: DNL43_11850
so part of: sequence
location: 17421..17648
location: region:17421-17648:1
so has part: feature:17421-17648:1:exon
subclass of: SO_0000010

71568186
type: Gene
SIO_000068: ncbigene

position:17421:1
position: 17421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17648:1
position: 17648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17421-17648:1:exon

DNL43_RS11730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11730
old locus tag: DNL43_11850
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012552807.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIGGIVMSQSNLEKQEAKLKALNQKIKDEKNKIEQRLGKQIINQANLDYANLSNDQIKLLAKQFSEFLKVKPVDH
SIO_010081: DNL43_RS11730
subclass of: SO_0000673
so part of: DNL43_RS11730
location: 17421..17648
location: region:17421-17648:1
so has part: feature:17421-17648:1:exon

WP_162551353.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17421-17648:1:exon

DNL43_RS11735
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11735
old locus tag: DNL43_11855
so part of: sequence
location: 17671..17997
location: region:17671-17997:1
so has part: feature:17671-17997:1:exon
subclass of: SO_0000010

71568187
type: Gene
SIO_000068: ncbigene

position:17671:1
position: 17671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17997:1
position: 17997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17671-17997:1:exon

DNL43_RS11735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11735
old locus tag: DNL43_11855
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003603789.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKQYEKLIEQQARLKQKIEREDFKLRQSKYYENRQARKARSRRLIQKGALLEKYFQANNLSVEQTEELLKTFADYVNSHKPNKKLLPPVYQSLKADEITIDQSKSGF
SIO_010081: DNL43_RS11735
subclass of: SO_0000673
so part of: DNL43_RS11735
location: 17671..17997
location: region:17671-17997:1
so has part: feature:17671-17997:1:exon

WP_225364716.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17671-17997:1:exon

DNL43_RS11740
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11740
old locus tag: DNL43_11860
so part of: sequence
location: complement(18074..18814)
location: region:18074-18814:-1
so has part: feature:18074-18814:-1:exon
subclass of: SO_0000010

71568188
type: Gene
SIO_000068: ncbigene

position:18074:-1
position: 18074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18814:-1
position: 18814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18074-18814:-1:exon

DNL43_RS11740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11740
old locus tag: DNL43_11860
EC number: 1.1.1.47
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002831168.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glucose 1-dehydrogenase
translation: MGRLDKKVAIITGGVKGFGLAMAKLFVKEGAKVVITDVDDQHADEALDEIGRANAIFTKQDVSQEAGWEPVFKTAVEKFGKVNILINNAGILSFNDAETIDLATWHKILSVDLDGVMLGTKCAIKFMKENGGSIVNISSIAGLIGISNLYAYNAAKGGVRMLTKSAALYCAEKHYAIRVNSVHPGYAHTPMVDAYPEMRQKLESLHPMGRLGTADEIANAALYLASDESSFSTGSELVVDGGYTAQ
SIO_010081: DNL43_RS11740
subclass of: SO_0000673
so part of: DNL43_RS11740
location: complement(18074..18814)
location: region:18074-18814:-1
so has part: feature:18074-18814:-1:exon

WP_054769789.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18074-18814:-1:exon

DNL43_RS11745
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11745
old locus tag: DNL43_11865
pseudo: true
so part of: sequence
location: complement(19031..19537)
location: region:19031-19537:-1
so has part: feature:19031-19537:-1:exon
subclass of: SO_0000010

71568189
type: Gene
SIO_000068: ncbigene

position:19031:-1
position: 19031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19537:-1
position: 19537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19031-19537:-1:exon

DNL43_RS11745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11745
old locus tag: DNL43_11865
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002823700.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: DNL43_RS11745
subclass of: SO_0000673
so part of: DNL43_RS11745
location: complement(19031..19537)
location: region:19031-19537:-1
so has part: feature:19031-19537:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19031-19537:-1:exon

DNL43_RS11750
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11750
old locus tag: DNL43_11870
so part of: sequence
location: complement(19527..19808)
location: region:19527-19808:-1
so has part: feature:19527-19808:-1:exon
subclass of: SO_0000010

71568190
type: Gene
SIO_000068: ncbigene

position:19527:-1
position: 19527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19808:-1
position: 19808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19527-19808:-1:exon

DNL43_RS11750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11750
old locus tag: DNL43_11870
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005693113.1
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelB/DinJ family antitoxin
translation: MTVKEKKRVQVKIDKDLADDTEAVLSELGLNPTTAINMFYKRIVANGALPFNASLSEEERANLRFLKATEGTPVTEFKDAKEVADWLNDPDED
SIO_010081: DNL43_RS11750
subclass of: SO_0000673
so part of: DNL43_RS11750
location: complement(19527..19808)
location: region:19527-19808:-1
so has part: feature:19527-19808:-1:exon

WP_054769787.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19527-19808:-1:exon

DNL43_RS11755
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11755
old locus tag: DNL43_11875
so part of: sequence
location: complement(20059..21231)
location: region:20059-21231:-1
so has part: feature:20059-21231:-1:exon
subclass of: SO_0000010

71568191
type: Gene
SIO_000068: ncbigene

position:20059:-1
position: 20059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21231:-1
position: 21231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20059-21231:-1:exon

DNL43_RS11755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11755
old locus tag: DNL43_11875
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012552803.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiator protein A
translation: MTKSKNFNYYEADNVYGALFFQFPKVLMYGEQYKHLSSDAKLAYMVLKDRLEYSLRNHWVDEDNHVYFIFTVQELQDLFNCATEKAVKIKKELQTANLLKQIQMGFNPKTKKNEPNRLYLSKLDVKATDVYLRGEYGQETPKSLATSGISKIESPHDFVGSLATSGISKIESPHDFVGSLATSGISKIESPHDFVDNSSQSLATSGISKIESNLYKDSKNIDTNRYNIDTQKLDFSTAHFSPAEIQKQNQDLVNHANDFLTDEDSGLPVFLEPEAVQLLSFWCRTPQQMRRFIGIILNAKYRVEKDHQDVGFLIPLDDEELKPLMTKALRRYFNALRSNEKHIKNVENYLYGTMQNLFGVWWNKQAAREYAAKHPEEEKSADNDSSGLYY
SIO_010081: DNL43_RS11755
subclass of: SO_0000673
so part of: DNL43_RS11755
location: complement(20059..21231)
location: region:20059-21231:-1
so has part: feature:20059-21231:-1:exon

WP_156645085.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20059-21231:-1:exon

DNL43_RS11760
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11760
old locus tag: DNL43_11880
so part of: sequence
location: 22211..23107
location: region:22211-23107:1
so has part: feature:22211-23107:1:exon
subclass of: SO_0000010

71568192
type: Gene
SIO_000068: ncbigene

position:22211:1
position: 22211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23107:1
position: 23107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22211-23107:1:exon

DNL43_RS11760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11760
old locus tag: DNL43_11880
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010625592.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA superfamily DNA segregation protein PrgP
translation: MGYVIINAQQKGGVGKTTDTVMEAVVASSLFNKKVLVIDTDLQGNATTFLAKTYKDLNINKSFMSCMEDGDLEAGLVHLGPNIDMIASDYDTRKFGDFLADKFKNTIDRTFYLKKLVDKLKDSYDFVFIDVPPSTDIKVDNAMACADYVIVIQETQQFAFDGSKKLVLTYLQTLADDFGDKINLQVAGILPVLLQARRPLQTKIVRETIEYFGKDNVFNNIINNHARLEWYTAQGVQFQDFHDKRIWALFADIFCELQARIESFEKTNDVINFHYDHQYINQNRLTPLGKEMTVNGFN
SIO_010081: DNL43_RS11760
subclass of: SO_0000673
so part of: DNL43_RS11760
location: 22211..23107
location: region:22211-23107:1
so has part: feature:22211-23107:1:exon

WP_095345036.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22211-23107:1:exon

DNL43_RS11765
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11765
old locus tag: DNL43_11885
so part of: sequence
location: 23094..23372
location: region:23094-23372:1
so has part: feature:23094-23372:1:exon
subclass of: SO_0000010

71568193
type: Gene
SIO_000068: ncbigene

position:23094:1
position: 23094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23372:1
position: 23372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23094-23372:1:exon

DNL43_RS11765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11765
old locus tag: DNL43_11885
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010623328.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA segregation protein PrgO
translation: MALIKKDNNQQVRIKHTANVDRNLTPSKKFKSSDRRTLKVDPPVYQLIKSLAYITDKKMYDLVREMANAYLDNNITDRQRENVLRNIDDIER
SIO_010081: DNL43_RS11765
subclass of: SO_0000673
so part of: DNL43_RS11765
location: 23094..23372
location: region:23094-23372:1
so has part: feature:23094-23372:1:exon

WP_057910342.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23094-23372:1:exon

DNL43_RS12255
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS12255
pseudo: true
so part of: sequence
location: complement(23390..>23500)
location: region:23390-23500:-1
so has part: feature:23390-23500:-1:exon
subclass of: SO_0000010

71568281
type: Gene
SIO_000068: ncbigene

position:23390:-1
position: 23390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23500:-1
position: 23500
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23390-23500:-1:exon

DNL43_RS12255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS12255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013727908.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5/IS1182 family transposase
SIO_010081: DNL43_RS12255
subclass of: SO_0000673
so part of: DNL43_RS12255
location: complement(23390..>23500)
location: region:23390-23500:-1
so has part: feature:23390-23500:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23390-23500:-1:exon

DNL43_RS11770
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11770
old locus tag: DNL43_11890
pseudo: true
so part of: sequence
location: 23567..>23812
location: region:23567-23812:1
so has part: feature:23567-23812:1:exon
subclass of: SO_0000010

71568194
type: Gene
SIO_000068: ncbigene

position:23567:1
position: 23567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23812:1
position: 23812
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23567-23812:1:exon

DNL43_RS11770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11770
old locus tag: DNL43_11890
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612162.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: DNL43_RS11770
subclass of: SO_0000673
so part of: DNL43_RS11770
location: 23567..>23812
location: region:23567-23812:1
so has part: feature:23567-23812:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23567-23812:1:exon

DNL43_RS11775
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11775
old locus tag: DNL43_11895
so part of: sequence
location: complement(23810..24613)
location: region:23810-24613:-1
so has part: feature:23810-24613:-1:exon
subclass of: SO_0000010

71568195
type: Gene
SIO_000068: ncbigene

position:23810:-1
position: 23810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24613:-1
position: 24613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23810-24613:-1:exon

DNL43_RS11775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11775
old locus tag: DNL43_11895
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014940606.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AraC family transcriptional regulator
translation: MRIAFNKPVETMPLYCDSVGYDWNQPPIHRLNGYYAYHWLQTQSGSGVITIDHQSISLEPQQGILLRPRVAHECHPTGGSPWKVSFLTFNGTLCRSLADFLKLGDYLVINQVSPELTTFIPEVLNEFNNSHPIALLDQSVQIYKFIMLLKQNNLLNNHRYQDSAITTPILKYIANHYAEPISNEKLAKVTSYSVTYQNRVFKRLYTMTPLEYLTDYRMRKAKELLLTNPTLEIREVAAKVGFHNPSHFIDQFKKFYRTTPSHFRKFI
SIO_010081: DNL43_RS11775
subclass of: SO_0000673
so part of: DNL43_RS11775
location: complement(23810..24613)
location: region:23810-24613:-1
so has part: feature:23810-24613:-1:exon

WP_095345037.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23810-24613:-1:exon

DNL43_RS11780
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11780
old locus tag: DNL43_11900
so part of: sequence
location: 24812..26776
location: region:24812-26776:1
so has part: feature:24812-26776:1:exon
subclass of: SO_0000010

71568196
type: Gene
SIO_000068: ncbigene

position:24812:1
position: 24812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26776:1
position: 26776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24812-26776:1:exon

DNL43_RS11780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11780
old locus tag: DNL43_11900
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008212160.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015486 - glycoside-pentoside-hexuronide:cation symporter activity [Evidence IEA]
GO process: GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0006812 - cation transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PTS sugar transporter subunit IIA
translation: MDAVQKKDRRKKFWSIFNFGFANIGGSAVYMTFGTYFMVYVTSAMFTGVPKAQANKLIAMITGLIFIIRLVEVFIDPIIGNIVDNTNTRWGKFKPWLIGAGTISSLLLALLFSGIFGLSRISATWFTIMFIPIFITFDIFYSFRDVSYWGMVPALTEDSHERSLFTAAANFSAFGQNIVTIIIVPVVTYVTFVFTGSHNEGQPGWTAFGILIAVVGIICSFVVGLGTHEKHNALRAVTKQKTSLKDMFWALAHNDQMLWTAFPYLIYGFGNASTAGLMFYMFKYVMDKPGLFWIAGLIPTIAGFFTSPLYPIINKWVTRKTIYAVSMCSMILAYILLIVSVDDLPMVITAMILYYVPQGFIFMAVILTLTDTIEYGQLKNGTRNEAVTLAIRPMLDKMSGAISNAIVGWVAVAAGMTGTATAASMTPGGISLFKLVAFWISLFLLVAALFIYVFKVKISEKKHDEIVDELQKKLATEGISGAQAADNTTAQTEVTMPGAKAATIAVAAPVSGVCVNLADVVDEHDHKGLPGNGIGIQPTEGKIYAPFDGQVLMLFTTKHVIGLRSNDGLEVLIHVGLGTVNMRGEGFINHVDSGQSFKKGDLLLEFNRDKIQQAGYKDTVVVLLTQGDKVVQTDYTQQEVVSHGDELVKAQLKK
SIO_010081: DNL43_RS11780
subclass of: SO_0000673
so part of: DNL43_RS11780
location: 24812..26776
location: region:24812-26776:1
so has part: feature:24812-26776:1:exon

WP_095345038.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24812-26776:1:exon

DNL43_RS11785
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11785
old locus tag: DNL43_11905
so part of: sequence
location: complement(27029..30034)
location: region:27029-30034:-1
so has part: feature:27029-30034:-1:exon
subclass of: SO_0000010

71568197
type: Gene
SIO_000068: ncbigene

position:27029:-1
position: 27029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30034:-1
position: 30034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27029-30034:-1:exon

DNL43_RS11785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11785
old locus tag: DNL43_11905
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010051905.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tn3 family transposase
translation: MNQVNQIPTNVKGLGNFAGAPSTDQLRLYFQLTDFDRDLIKEMRSAATQLGFAVQLGSVRFLGTFPNDLQQVPQAVIDYLASQLSLSALSFTQYTRRMTISQHQNLIRQRYHYCNFTDPTINQSLTAWLLKRAKYTNETNQLLSDMLLKKCLDEKILLPGITTFERFVSQTIELAADQTDQAIAAIPTVREVHQLRNLLTAVETPVYGATIRLDVLRKPLMDESRKEIQRGFQRLRQFGQFPTETWQLATIPEGKLKQLAKYAFNAKASLIKRMNPTRQTALLVAFVYEYRKRAMDEQLLALSRFYETLFKRAKNKETKERMRTLKDLDQAALTLAKIVGLVLDDTIDQQALRPTILRQYGPDNIQSAVTQVNQLVHNDEEPIAIEELLTAYRKFRKFIPDILATITFAGTHYGQDSLTVWRLIEQRFPRPITYSMFQSIEAQLPKKWRYYINQHPNLTNQCVLIAGIEQLMHGLKRHDIYVTQSERYTDPMACLIDQTTWQSQKAILIQQLNLPETGSAAVEMLETDLNLSYQETLKNWPDSAMARIEQVGGHDKIVVAKLRKTREHKDEAAFRNRVRRLIPKIDLSDLLLEMNQQLQLTHCFTHLNAGETKMKHVDISILAVLLAEACNIGLSPVAKKTDRNLKHDRLLYVDHQYLRLDTLSAANHRIIKAHRQLKTAQIWGDGQMASADGIRYVTPQRSLYSRSNPKYFGRGRGITFYNFVSDQYIGFHGMVVAGTLRDSLYLLEGFLNQTSDLEPQQIMTDTAGYSDLVFGLFGLLGFQFSPRIANNQGTKLWRCDPQADYQILNGVSQNRINRQLIADNWDDILRVAGSLKSGKVNATELTQALQREGHPTQLGKAITEYGKVYKTKHQLRYLSDEGYARQILEQLNKGEARHALCRNIFYGRKGKLYQTYFDGMEEQLNALSLVTNAIIYWNTVYMEAIIAKMKTEGYQCDDEMIGKLSPLMFEHINFIGQYTFQYDEALADGQLRPLDTLEENS
SIO_010081: DNL43_RS11785
subclass of: SO_0000673
so part of: DNL43_RS11785
location: complement(27029..30034)
location: region:27029-30034:-1
so has part: feature:27029-30034:-1:exon

WP_095345039.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27029-30034:-1:exon

DNL43_RS11790
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11790
old locus tag: DNL43_11910
so part of: sequence
location: 30213..30794
location: region:30213-30794:1
so has part: feature:30213-30794:1:exon
subclass of: SO_0000010

71568198
type: Gene
SIO_000068: ncbigene

position:30213:1
position: 30213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30794:1
position: 30794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30213-30794:1:exon

DNL43_RS11790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11790
old locus tag: DNL43_11910
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002330479.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MIIGYARVSKDDQNLNRQVDQLQAYGAEKIIQEKFTGTKRQRPGLDQLLQLIRANDVVVVESISRLGRQTLDILNLIQLLHQKQVKFVSLKENMDTATPTGRAMLQMMSVIAELERNLLADRVKEGIAASRRRGVTVGRPRVPQEKLKIAIRMYRSNEYSVKEILATNQISAGTFYREVNRLKLKKLKRKDEQ
SIO_010081: DNL43_RS11790
subclass of: SO_0000673
so part of: DNL43_RS11790
location: 30213..30794
location: region:30213-30794:1
so has part: feature:30213-30794:1:exon

WP_054769832.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30213-30794:1:exon

DNL43_RS11800
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11800
old locus tag: DNL43_11920
pseudo: true
so part of: sequence
location: complement(30867..32071)
location: region:30867-32071:-1
so has part: feature:30867-32071:-1:exon
subclass of: SO_0000010

71568199
type: Gene
SIO_000068: ncbigene

position:30867:-1
position: 30867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32071:-1
position: 32071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30867-32071:-1:exon

DNL43_RS11800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11800
old locus tag: DNL43_11920
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020751524.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ISL3 family transposase
SIO_010081: DNL43_RS11800
subclass of: SO_0000673
so part of: DNL43_RS11800
location: complement(30867..32071)
location: region:30867-32071:-1
so has part: feature:30867-32071:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30867-32071:-1:exon

DNL43_RS11805
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11805
old locus tag: DNL43_11925
so part of: sequence
location: complement(32107..32882)
location: region:32107-32882:-1
so has part: feature:32107-32882:-1:exon
subclass of: SO_0000010

71568200
type: Gene
SIO_000068: ncbigene

position:32107:-1
position: 32107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32882:-1
position: 32882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32107-32882:-1:exon

DNL43_RS11805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11805
old locus tag: DNL43_11925
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612162.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5-like element ISLpl3 family transposase
translation: MTTPKRYELEDAQWDRIKGYFPPYRTGRPSSLDNRTALNAILWLMRSGAPWRDLPERYGSWKTVYSRFRAWVSSGLFEQVFLELIDDPDMENLSLDSTIVRAHQKATGGKKNAECMVENQAIGLSRGGRTTKIHALVDGLGNPLGFRLTGGQVHDSQVASELLEGFDISQSNIIADKAYGTAKLRQYIEDKAGVYTIPPKENTKDKWTCDYHVYCERHLIENFFNQLKNFRRIATRYDKLAHVYLATVYIASICILLK
SIO_010081: DNL43_RS11805
subclass of: SO_0000673
so part of: DNL43_RS11805
location: complement(join(32107..32558,32558..32882))
location: region:32107-32882:-1
so has part: feature:32558-32882:-1:exon
so has part: feature:32107-32558:-1:exon

WP_086989537.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32558-32882:-1:exon

position:32558:-1
position: 32558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:32107-32558:-1:exon

DNL43_RS11810
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11810
old locus tag: DNL43_11930
so part of: sequence
location: complement(33014..33337)
location: region:33014-33337:-1
so has part: feature:33014-33337:-1:exon
subclass of: SO_0000010

71568201
type: Gene
SIO_000068: ncbigene

position:33014:-1
position: 33014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33337:-1
position: 33337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33014-33337:-1:exon

DNL43_RS11810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11810
old locus tag: DNL43_11930
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNKLNQLLIIAAASVGASFLLLTGVLMPAFAATSPTSTTQTSPITTIATQDQAEDNNSGTLDGGVTWQIANDNLTISGGTIGSRIFGVGKYFHSKSTRPFLITKKGI
SIO_010081: DNL43_RS11810
subclass of: SO_0000673
so part of: DNL43_RS11810
location: complement(33014..33337)
location: region:33014-33337:-1
so has part: feature:33014-33337:-1:exon

WP_095345019.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33014-33337:-1:exon

DNL43_RS11815
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11815
old locus tag: DNL43_11935
so part of: sequence
location: complement(33594..34343)
location: region:33594-34343:-1
so has part: feature:33594-34343:-1:exon
subclass of: SO_0000010

71568202
type: Gene
SIO_000068: ncbigene

position:33594:-1
position: 33594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34343:-1
position: 34343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33594-34343:-1:exon

DNL43_RS11815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11815
old locus tag: DNL43_11935
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003625203.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4430 domain-containing protein
translation: MKKAIGFILAFILTIGIAFGAQQVISSRDAAPKPTTSKQVTSSSSSSTSSSHLKQPSHQQKAKGASKAKPKADRRAQKTANKPQTASSQSSTSPNRTTGSSAKASPNKVAKTKRSNAPKSDKLGKINHKAETKVFQDTHHAAKKSSNAKNTIQIHLTIDGYKKVFYSKRMRVKKGANAFSILKQTNLKFSYIPGPSVYVNGINGLKENDVKAGSGWMFSVNKKFIDHAANLTKLKSGDNVRWYFTTEGY
SIO_010081: DNL43_RS11815
subclass of: SO_0000673
so part of: DNL43_RS11815
location: complement(33594..34343)
location: region:33594-34343:-1
so has part: feature:33594-34343:-1:exon

WP_095345018.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33594-34343:-1:exon

DNL43_RS11820
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11820
old locus tag: DNL43_11940
so part of: sequence
location: complement(34378..35424)
location: region:34378-35424:-1
so has part: feature:34378-35424:-1:exon
subclass of: SO_0000010

71568203
type: Gene
SIO_000068: ncbigene

position:34378:-1
position: 34378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35424:-1
position: 35424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34378-35424:-1:exon

DNL43_RS11820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11820
old locus tag: DNL43_11940
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014919419.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fucose-binding lectin II
translation: MNKYIKSVLTSATLVIAALTLSTTTNAASIRKASTGTIHSSIARTYSYAKKMIKENKTGLSGQSSSIFSKKLNPDTGATAGYSDFLLGLKGNGYKFNTKEKTLLRKNLVIKKTTPAGTMANAVMAVQAMGLNARDYKPYGHKKGINLVTKLYRTSVSKQTTSAQAQVLIAISMSSKFKQPKGAKFSKASLSARLLKAQLNNHGWTYNNQQGVRDADTTSMVLTGLARGKVNTTNVKDSLLKGQKFLTGIVQPSGAFGYTFNGKTTPNANSTAEAIIALSNDFGMKKYVNNTAMKTSQTRTPLYAMLTYVNKSGSIKNAATQLYGVGQVNLAVAAYKAALKNRSVYTIN
SIO_010081: DNL43_RS11820
subclass of: SO_0000673
so part of: DNL43_RS11820
location: complement(34378..35424)
location: region:34378-35424:-1
so has part: feature:34378-35424:-1:exon

WP_095345017.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34378-35424:-1:exon

DNL43_RS11825
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11825
old locus tag: DNL43_11945
so part of: sequence
location: complement(35512..37857)
location: region:35512-37857:-1
so has part: feature:35512-37857:-1:exon
subclass of: SO_0000010

71568204
type: Gene
SIO_000068: ncbigene

position:35512:-1
position: 35512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37857:-1
position: 37857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35512-37857:-1:exon

DNL43_RS11825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11825
old locus tag: DNL43_11945
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013854956.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF5776 domain-containing protein
translation: MKRKQFLYWLSIVLGIFLIFFSGGNSSRADTASDVNSAISTGLTEIAQQGSQIDAWDATCLVFGDNGITDLQAQYAYKSILKNNDFLSGGSQGLNGISDVSAVNGLVAIGKDPTNVNGKNLVADIVKDANNPASDYSIVNDLEALSTGSYGQASETARTSLTKKLIGMQDQKTGLWNGFDKVDYTARAILALSMNTNQPGTADALNTAVKAVSNHLYQENGGFADSSNTMFGAENAYDDVTMTNALASAGVNVYVPLKGKTDYVAPVQRVLDQHPVSAGNSAMLIQQATWTFEQARFTRNGGKGSIFAFNQADAAKPGEIVSIKAAAITKKQSIINDPQATAATKSDALNLVDQILATYVSKLSADSTSSAAIADRAAGVTAFNHVTVSHAAPATPVTPPTVTNNNVTVVNNPASSSSASSSSSATSTSSSSSVPISTPTVSGKPVKKASHRSIVYALTTVKLYRSSNFTKSNLTKTYKKRARINRPMFLVISQQTNKQGHAIYRVKDTNSGKTGYTLFGSKYFAHAYYSAKVTRIKVINPKGINEYGKVNLTSKKRHVKKNASLSVRKVVNYGRSNRMQLTNGRYITANKKLILATKIKKSSQNTRPSTPTATTTGTSTSTPPTNSGSTATTTTTTNSKPTATTGTATGTTTTTNNSPSATPTLPVAPTNPVTPSNDAKTITTTISIHADGATIASGSIKVNSGASALDALQAFAQQQGLALTYTGSGATAYVTGINGYNAGPAGTMTGWLYSVNGTEPSSSMGVYTLKDGDSISMTYNK
SIO_010081: DNL43_RS11825
subclass of: SO_0000673
so part of: DNL43_RS11825
location: complement(35512..37857)
location: region:35512-37857:-1
so has part: feature:35512-37857:-1:exon

WP_095345016.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35512-37857:-1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 33962
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00174
inference: COORDINATES: profile:INFERNAL:1.1.1
note: cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: adenosylcobalamin
so part of: sequence
location: complement(38060..38228)
location: region:38060-38228:-1
so has part: feature:38060-38228:-1:region

position:38060:-1
position: 38060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38228:-1
position: 38228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38060-38228:-1:region

DNL43_RS11830
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11830
old locus tag: DNL43_11950
pseudo: true
so part of: sequence
location: complement(38325..>38786)
location: region:38325-38786:-1
so has part: feature:38325-38786:-1:exon
subclass of: SO_0000010

71568205
type: Gene
SIO_000068: ncbigene

position:38325:-1
position: 38325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38786:-1
position: 38786
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38325-38786:-1:exon

DNL43_RS11830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11830
old locus tag: DNL43_11950
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012211549.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ISLre2 family transposase
SIO_010081: DNL43_RS11830
subclass of: SO_0000673
so part of: DNL43_RS11830
location: complement(38325..>38786)
location: region:38325-38786:-1
so has part: feature:38325-38786:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:38325-38786:-1:exon

DNL43_RS11835
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11835
old locus tag: DNL43_11955
so part of: sequence
location: 39063..39959
location: region:39063-39959:1
so has part: feature:39063-39959:1:exon
subclass of: SO_0000010

71568206
type: Gene
SIO_000068: ncbigene

position:39063:1
position: 39063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39959:1
position: 39959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39063-39959:1:exon

DNL43_RS11835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11835
old locus tag: DNL43_11955
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012212332.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: energy-coupling factor transporter transmembrane component T
translation: MTHTPIKMTFFSQLHPVALTLYFTELIVCLLLFNHVAVAVAEFIALTITATYYLGGQKTARQLKYAVSFLLMILFFNTLLNQKFPPILWHFKWGILTFKFSYPAFLYGIAMAIVLIAMLFVFSVLNAVLTPSKLIYVFSPIAPRLAVLVTISFTLVTSFTDRLKRILRLQKTRNVDVVNGSLKTRTQKTLHIFEILLQDALSSAMETANLMDARGFGAAKRTHYRSYHWQFSDLLFITIATVMLVATIGVRILSMGTSRSVANFTTIFTPGDTWPIVVTALLFLLPLISEGVYRSCKN
SIO_010081: DNL43_RS11835
subclass of: SO_0000673
so part of: DNL43_RS11835
location: 39063..39959
location: region:39063-39959:1
so has part: feature:39063-39959:1:exon

WP_095345015.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39063-39959:1:exon

DNL43_RS11840
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11840
old locus tag: DNL43_11960
so part of: sequence
location: 39947..41611
location: region:39947-41611:1
so has part: feature:39947-41611:1:exon
subclass of: SO_0000010

71568207
type: Gene
SIO_000068: ncbigene

position:39947:1
position: 39947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41611:1
position: 41611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39947-41611:1:exon

DNL43_RS11840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11840
old locus tag: DNL43_11960
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014919415.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding cassette domain-containing protein
translation: MQKLATVTHLTFTYPDQSTPVLDDVNFTIDPGDFIVIAGNTGSGKTTLLNHLKKELMPKGARTGDVQIAETPVADMPKLVSAQTVGYVAQDPQTQPVMATVIEELAFPLENIGCPSNEIERRITELANFLGLDQNLDRQIHQLSGGQLQLVNLASVLILRPKLILLDEPTSQLDPPTAQHFLTVLGRINQELGITIMLTEHRLSTVAAMANRMILLQDYHLTFDGDPHSGLAKMATDAHLTYFVPSIPKLFLDQQIRTSQLPISVADAQSAIRTHHLQFQSVTTGGKVAQLPPAEKPILTVNNISFSFDGQHNVLHHLNLAINPGTWLAIIGKNGSGKSTLLTLICGLMTPQHGKIRFVHQLVWKMAINQRMAKLAFLSQTPRLQFTADTVREELEVQAAELRLPDAKAQVDHMINQFHLNRIEKQNPFDISGGQQQLVGLAIALMATPDLLVLDEPTKGLDPYTKIQVGNLLKQYQQAGMTIVIASHDMEFCAKFADKCTFMFDGHLNTLLATQSFFADNFFFTTPINRIARDQVKDALLPVDLKLANHPERG
SIO_010081: DNL43_RS11840
subclass of: SO_0000673
so part of: DNL43_RS11840
location: 39947..41611
location: region:39947-41611:1
so has part: feature:39947-41611:1:exon

WP_095345014.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39947-41611:1:exon

DNL43_RS11845
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11845
old locus tag: DNL43_11965
so part of: sequence
location: 41619..42329
location: region:41619-42329:1
so has part: feature:41619-42329:1:exon
subclass of: SO_0000010

71568208
type: Gene
SIO_000068: ncbigene

position:41619:1
position: 41619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42329:1
position: 42329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41619-42329:1:exon

DNL43_RS11845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11845
old locus tag: DNL43_11965
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014919416.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ECF transporter S component
translation: MKQSSLLNRYRLLIALLLMFIFLLFIVLLKGKHYLLFSFMCLICSLLPAYWRFEHDPISTQTLVFVAVLIALAVATRVPLGAIPGVQGASFVVILSGVSLGPELGFITGSTTALVSNMFMGQGPWTPWQMVAWGLMGLTAGLFMKARLSHSLIFMIVFACVWGYLFGWIMDLWYALAYVSPLTIKSFILAFAASFFPFDTFHAASNAFLIALFYKPWEKLFHRLVTKYNILPDKNQ
SIO_010081: DNL43_RS11845
subclass of: SO_0000673
so part of: DNL43_RS11845
location: 41619..42329
location: region:41619-42329:1
so has part: feature:41619-42329:1:exon

WP_095345013.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41619-42329:1:exon

DNL43_RS11850
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11850
old locus tag: DNL43_11970
so part of: sequence
location: 42349..42558
location: region:42349-42558:1
so has part: feature:42349-42558:1:exon
subclass of: SO_0000010

71568209
type: Gene
SIO_000068: ncbigene

position:42349:1
position: 42349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42558:1
position: 42558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42349-42558:1:exon

DNL43_RS11850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11850
old locus tag: DNL43_11970
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLTSKLLMISASTLLGFGSIAPAFTANAASVKTASRAYQNSKIKTNYRYAKNLMIKNKTGLSGKTTAT
SIO_010081: DNL43_RS11850
subclass of: SO_0000673
so part of: DNL43_RS11850
location: 42349..42558
location: region:42349-42558:1
so has part: feature:42349-42558:1:exon

WP_225364714.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42349-42558:1:exon

DNL43_RS11855
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11855
old locus tag: DNL43_11975
pseudo: true
so part of: sequence
location: complement(<42552..42758)
location: region:42552-42758:-1
so has part: feature:42552-42758:-1:exon
subclass of: SO_0000010

71568210
type: Gene
SIO_000068: ncbigene

position:42552:-1
position: 42552
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:42758:-1
position: 42758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42552-42758:-1:exon

DNL43_RS11855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11855
old locus tag: DNL43_11975
inference: COORDINATES: similar to AA sequence:RefSeq:WP_050892470.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ISL3 family transposase
SIO_010081: DNL43_RS11855
subclass of: SO_0000673
so part of: DNL43_RS11855
location: complement(<42552..42758)
location: region:42552-42758:-1
so has part: feature:42552-42758:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:42552-42758:-1:exon

DNL43_RS11860
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11860
old locus tag: DNL43_11980
so part of: sequence
location: 42982..43569
location: region:42982-43569:1
so has part: feature:42982-43569:1:exon
subclass of: SO_0000010

71568211
type: Gene
SIO_000068: ncbigene

position:42982:1
position: 42982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43569:1
position: 43569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42982-43569:1:exon

DNL43_RS11860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11860
old locus tag: DNL43_11980
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016366110.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MAKIGYARVSSKEQHLDRQLAALRGVDKLFTDKLSGANTNRPELQKMLAYIREGDIVLVTELDRLGRNNQDLTKIMNTIQNKGATLDVLNLPSMTGIADPNLRQLMTNLIIELYKYQAESERKRIIERQQQGIFLAKQQGKYHGRKPQYTEDDPRLLHAFKLYQTGMSDVDVARNTGIKRTTFIRYRKKCNIKRS
SIO_010081: DNL43_RS11860
subclass of: SO_0000673
so part of: DNL43_RS11860
location: 42982..43569
location: region:42982-43569:1
so has part: feature:42982-43569:1:exon

WP_040168095.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42982-43569:1:exon

misc_binding
type: Miscellaneous Binding Site
subclass of: SO_0000409
RO_0002162: 33962
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00230
inference: COORDINATES: profile:INFERNAL:1.1.1
note: T-box leader; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: tRNA
so part of: sequence
location: 44009..44257
location: region:44009-44257:1
so has part: feature:44009-44257:1:region

position:44009:1
position: 44009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44257:1
position: 44257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44009-44257:1:region

DNL43_RS11865
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
gene: asnB
locus tag: DNL43_RS11865
old locus tag: DNL43_11985
so part of: sequence
location: 44324..45913
location: region:44324-45913:1
so has part: feature:44324-45913:1:exon
subclass of: SO_0000010

71568212
type: Gene
SIO_000068: ncbigene

position:44324:1
position: 44324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45913:1
position: 45913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44324-45913:1:exon

DNL43_RS11865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
gene: asnB
locus tag: DNL43_RS11865
old locus tag: DNL43_11985
EC number: 6.3.5.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012391036.1
GO function: GO:0004066 - asparagine synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006529 - asparagine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: asparagine synthase B
translation: MCGFLAVDSKEFDLTTFCDALEKNVDRGPDMTETVEEDAVMFGFNRLAIMDLSDDGMQPFKGEDCTLVCNGEIYNFLQLKENVKDDFSFQSSSDCEVLIPLYRKYGLDTMCKMLDAEFAFVLYDKVAKKVVAGRDPIGIRPMFYGYTKEKGEIAFGSTAKTLMDLCDQIFPFPPGHYYDGEKFVTYRDPAMVTRMHTPSFEEATTGIRDYLVKGVEKRLYADAPVGYLLSGGLDSSLVCSIASKLMPGKKLRTFAIGMDRNPIDLKYAREVADYLGTDHTEFIMTRDDVLGALRKVIYTLETWDITTIRASIGMYLLCKKIHETTDLKVILTGECSDEMFGYKYTDYAPNAEAFQSESMKRVRELYMYDVLRADRCISANSLEGRVPFADLDFVEYVMSLDPDMKMNHYDKGKYLLRMAFAGQDYLPDDILMREKAAFSDAVGHSLVDDLKEYADAKYTDEDVAKASEKYAYKTPFTKESLLYRDIFEEFFPGKAEWIKDYWMPNSDWEGCDVDDPSARVLSNYGDSGK
SIO_010081: DNL43_RS11865
subclass of: SO_0000673
so part of: DNL43_RS11865
location: 44324..45913
location: region:44324-45913:1
so has part: feature:44324-45913:1:exon

WP_156645087.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44324-45913:1:exon

DNL43_RS11875
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11875
old locus tag: DNL43_12000
so part of: sequence
location: complement(46773..47560)
location: region:46773-47560:-1
so has part: feature:46773-47560:-1:exon
subclass of: SO_0000010

71568214
type: Gene
SIO_000068: ncbigene

position:46773:-1
position: 46773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47560:-1
position: 47560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46773-47560:-1:exon

DNL43_RS11875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11875
old locus tag: DNL43_12000
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013727908.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MKNYPSNITRQQFELIRPALENFRKRTKPRKYDLYEVFCAVLYVLKTGCQWRQVPGDFPEWRSVYNYYKIWSTKAEPTADSLLEQVFKKIVFTLRSQQDRSALTSFIIVDAQSVKNTATAENKGYDAGKKISGIKRHLAVDINGFPQAIHMTRANVSDRDGASAMIALHAMHLRQVQNVLVDGGYSGVNFQLDVASNLNATVQVAKRNELHRFEVMPQRWVVERSFSWLENCRRLWKNCERQLTTSLQMVVLAFLALLLKRF
SIO_010081: DNL43_RS11875
subclass of: SO_0000673
so part of: DNL43_RS11875
location: complement(join(46773..47302,47302..47560))
location: region:46773-47560:-1
so has part: feature:47302-47560:-1:exon
so has part: feature:46773-47302:-1:exon

WP_156645089.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47302-47560:-1:exon

position:47302:-1
position: 47302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:46773-47302:-1:exon

DNL43_RS12300
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS12300
so part of: sequence
location: complement(47630..48025)
location: region:47630-48025:-1
so has part: feature:47630-48025:-1:exon
subclass of: SO_0000010

75692407
type: Gene
SIO_000068: ncbigene

position:47630:-1
position: 47630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48025:-1
position: 48025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47630-48025:-1:exon

DNL43_RS12300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS12300
inference: COORDINATES: protein motif:HMM:NF024673.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MCRILGVSRAQYYRYRSPKPSKRQAEDEDLKQRILRIFAEFKQRYGVMKIHHELNLELQPLQRRCSPRRISRLMKELDIHSVTVNKWKAASASKTKVEQRLNLLKQDFSTTGLNQKWTADMTYIQTKRNGY
SIO_010081: DNL43_RS12300
subclass of: SO_0000673
so part of: DNL43_RS12300
location: complement(47630..48025)
location: region:47630-48025:-1
so has part: feature:47630-48025:-1:exon

WP_263863753.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47630-48025:-1:exon

DNL43_RS12305
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS12305
so part of: sequence
location: complement(48079..48330)
location: region:48079-48330:-1
so has part: feature:48079-48330:-1:exon
subclass of: SO_0000010

75692408
type: Gene
SIO_000068: ncbigene

position:48079:-1
position: 48079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48330:-1
position: 48330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48079-48330:-1:exon

DNL43_RS12305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS12305
inference: COORDINATES: protein motif:HMM:NF013677.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MPTRYDKEFKQNIINLYKQGESAAQLAREYGIGYSTVHKWIQGQAKTQSGKSPDEIKAMEKRLASLSEENEILKKALGFLAQK
SIO_010081: DNL43_RS12305
subclass of: SO_0000673
so part of: DNL43_RS12305
location: complement(48079..48330)
location: region:48079-48330:-1
so has part: feature:48079-48330:-1:exon

WP_002816285.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48079-48330:-1:exon

DNL43_RS11885
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11885
old locus tag: DNL43_12010
so part of: sequence
location: complement(48360..48539)
location: region:48360-48539:-1
so has part: feature:48360-48539:-1:exon
subclass of: SO_0000010

71568216
type: Gene
SIO_000068: ncbigene

position:48360:-1
position: 48360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48539:-1
position: 48539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48360-48539:-1:exon

DNL43_RS11885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11885
old locus tag: DNL43_12010
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKNNRVFVIFFSILLFLTVGMSEKAYAEQISGTVHNELVGTFGCKLISETTFKRGYNE
SIO_010081: DNL43_RS11885
subclass of: SO_0000673
so part of: DNL43_RS11885
location: complement(48360..48539)
location: region:48360-48539:-1
so has part: feature:48360-48539:-1:exon

WP_156645091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48360-48539:-1:exon

DNL43_RS11890
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11890
old locus tag: DNL43_12015
so part of: sequence
location: complement(48523..48876)
location: region:48523-48876:-1
so has part: feature:48523-48876:-1:exon
subclass of: SO_0000010

71568217
type: Gene
SIO_000068: ncbigene

position:48523:-1
position: 48523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48876:-1
position: 48876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48523-48876:-1:exon

DNL43_RS11890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11890
old locus tag: DNL43_12015
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKRKLLVFAIIAVALIFFGGIYLNSDIYVTHQVNTKVNRVIQAGNTKELKRISNDKTTYKFLISLSNSTRCKDTSDFQGGTNKNAYYVTTLNKQKIGVHMYKASLFNWRIKYVEKQ
SIO_010081: DNL43_RS11890
subclass of: SO_0000673
so part of: DNL43_RS11890
location: complement(48523..48876)
location: region:48523-48876:-1
so has part: feature:48523-48876:-1:exon

WP_046783642.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48523-48876:-1:exon

DNL43_RS11895
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11895
old locus tag: DNL43_12020
pseudo: true
so part of: sequence
location: 49171..49724
location: region:49171-49724:1
so has part: feature:49171-49724:1:exon
subclass of: SO_0000010

71568218
type: Gene
SIO_000068: ncbigene

position:49171:1
position: 49171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49724:1
position: 49724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49171-49724:1:exon

DNL43_RS11895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11895
old locus tag: DNL43_12020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015474649.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: recombinase family protein
SIO_010081: DNL43_RS11895
subclass of: SO_0000673
so part of: DNL43_RS11895
location: 49171..49724
location: region:49171-49724:1
so has part: feature:49171-49724:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:49171-49724:1:exon

DNL43_RS11900
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11900
old locus tag: DNL43_12025
so part of: sequence
location: 50022..50809
location: region:50022-50809:1
so has part: feature:50022-50809:1:exon
subclass of: SO_0000010

71568219
type: Gene
SIO_000068: ncbigene

position:50022:1
position: 50022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50809:1
position: 50809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50022-50809:1:exon

DNL43_RS11900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11900
old locus tag: DNL43_12025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013727908.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MPNYPSNITRQQFEVIRSELENFCQRTKPRQVDLYDVFCAILYILKTGAQWRALPHDFPKWQTVYTYFRLWSRQPTPAEPSLLDQVFKKIVATLRSKQDRSALTSFIIVDAQSVKNTETAENKGYDAGKKISGIKRHLAVDMNGFPQAIHLTRANVSDRDGASAMLALNAENLRRVRSVLVDGGYSGRNFAMDVQLNLKATTQVAKRNELPKFEVLPQRWIIERSFSWLEKYRRLWKNCERQLHTSTTMVTLAFVSVFLRRF
SIO_010081: DNL43_RS11900
subclass of: SO_0000673
so part of: DNL43_RS11900
location: join(50022..50280,50280..50809)
location: region:50022-50809:1
so has part: feature:50022-50280:1:exon
so has part: feature:50280-50809:1:exon

WP_156645093.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50022-50280:1:exon

position:50280:1
position: 50280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:50280-50809:1:exon

DNL43_RS11905
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11905
so part of: sequence
location: complement(51277..51453)
location: region:51277-51453:-1
so has part: feature:51277-51453:-1:exon
subclass of: SO_0000010

71568220
type: Gene
SIO_000068: ncbigene

position:51277:-1
position: 51277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51453:-1
position: 51453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51277-51453:-1:exon

DNL43_RS11905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11905
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MISLLEKHPNKITPHIPIEKPKKQLPQRFPVKTPPEPPQINPEKIYPEKQPEEPVRRD
SIO_010081: DNL43_RS11905
subclass of: SO_0000673
so part of: DNL43_RS11905
location: complement(51277..51453)
location: region:51277-51453:-1
so has part: feature:51277-51453:-1:exon

WP_156645095.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51277-51453:-1:exon

DNL43_RS11910
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11910
old locus tag: DNL43_12030
so part of: sequence
location: complement(51453..51671)
location: region:51453-51671:-1
so has part: feature:51453-51671:-1:exon
subclass of: SO_0000010

71568221
type: Gene
SIO_000068: ncbigene

position:51671:-1
position: 51671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51453-51671:-1:exon

DNL43_RS11910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11910
old locus tag: DNL43_12030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003687813.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPWNEQNYPPSMKNLKKVVRKKAIEIANALKEKNYDDKRAISIATEQAEKWYQHRSDLKDDTPFKKNLRRHS
SIO_010081: DNL43_RS11910
subclass of: SO_0000673
so part of: DNL43_RS11910
location: complement(51453..51671)
location: region:51453-51671:-1
so has part: feature:51453-51671:-1:exon

WP_010579558.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51453-51671:-1:exon

DNL43_RS11915
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11915
old locus tag: DNL43_12035
so part of: sequence
location: complement(51935..52734)
location: region:51935-52734:-1
so has part: feature:51935-52734:-1:exon
subclass of: SO_0000010

71568222
type: Gene
SIO_000068: ncbigene

position:51935:-1
position: 51935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52734:-1
position: 52734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51935-52734:-1:exon

DNL43_RS11915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11915
old locus tag: DNL43_12035
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013727908.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MQHFSHHYQSDISRQQFDLIRQDLEASRKRTHPKHIDPYDIFCAMLYVLKNGCTWRDLPADYPKWSTVYYYWMSWSKAPTPDKPALLTQVLKKLSLNRRLRQGRSARTSFVILDAQSIKNTATAENKGYDGGKKISGIKRHLAVDINGFPQAIHITRANITDCDGAIALVTLNLEQFKLVRTMMVDSGYTGQNFANEISSLTSAKVIVVKKNELHQFLVIPQRWLIERSFSWLGNYHRLWRNCERKLNTSLMMVSLAFIRLFLKRY
SIO_010081: DNL43_RS11915
subclass of: SO_0000673
so part of: DNL43_RS11915
location: complement(join(51935..52446,52446..52734))
location: region:51935-52734:-1
so has part: feature:52446-52734:-1:exon
so has part: feature:51935-52446:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:52446-52734:-1:exon

position:52446:-1
position: 52446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:51935-52446:-1:exon

DNL43_RS11920
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11920
old locus tag: DNL43_12040
pseudo: true
so part of: sequence
location: complement(<52806..53420)
location: region:52806-53420:-1
so has part: feature:52806-53420:-1:exon
subclass of: SO_0000010

71568223
type: Gene
SIO_000068: ncbigene

position:52806:-1
position: 52806
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:53420:-1
position: 53420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52806-53420:-1:exon

DNL43_RS11920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11920
old locus tag: DNL43_12040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_053338758.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS30-like element ISLpl1 family transposase
SIO_010081: DNL43_RS11920
subclass of: SO_0000673
so part of: DNL43_RS11920
location: complement(<52806..53420)
location: region:52806-53420:-1
so has part: feature:52806-53420:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:52806-53420:-1:exon

DNL43_RS11925
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11925
old locus tag: DNL43_12050
so part of: sequence
location: 53612..55351
location: region:53612-55351:1
so has part: feature:53612-55351:1:exon
subclass of: SO_0000010

71568224
type: Gene
SIO_000068: ncbigene

position:53612:1
position: 53612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55351:1
position: 55351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53612-55351:1:exon

DNL43_RS11925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11925
old locus tag: DNL43_12050
EC number: 1.2.3.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005691647.1
GO function: GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyruvate oxidase
translation: MAQKASEQLVDVLIDWHVKHVYGLPGDSIDTTVDALRKQQDQIGFVQVRHEEVASLAAAAEAKLTGKLGVCLSIGGPGAIHMLNGLYDAKMDHVPVLALLGQVDTQFLNEEYFQEVNTPQLFADVAVYNKLISATDNLAEIVDEAIRTAYEKHGVAVLTIPDNLPEQRVSDHYISSASSFQLTSPQIDDNRLNTAAKLIRDSKKPLALVGLGAKKAGSQVAAFLEQNHIPFISTLPAKGIIGDNHPNSLGNVGKLGTKPAYEAMQNTDLLLMFGTNYPYTAYLPKPGTAKSIQINTSASAIGKRYPADVGLVADIKDVIKQLNSSETTILHPDDGFLKACQENVANWNRWMTGKRELDSKPVAPEALFNDINETAPLNTIYSIDVGTATSWSARFLNVSPTQKFILSSYLGTMGCALPGAIAAKINYPDRPVISVNGDGAFAMVMQDFITAVKYKLPLINIVLNNSKLAFIEYEQQAAGQLNYQIDLQDMDYAKFADAAGGVGITAKTSEEFKNALNRAYRVQNMPVLINAYVSDDAPLPGKIVGQEAKGYMKFGSQYLKEEKKIPELPPLKDILRQFF
SIO_010081: DNL43_RS11925
subclass of: SO_0000673
so part of: DNL43_RS11925
location: 53612..55351
location: region:53612-55351:1
so has part: feature:53612-55351:1:exon

WP_003560513.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53612-55351:1:exon

DNL43_RS11930
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11930
old locus tag: DNL43_12055
so part of: sequence
location: 55754..55996
location: region:55754-55996:1
so has part: feature:55754-55996:1:exon
subclass of: SO_0000010

71568225
type: Gene
SIO_000068: ncbigene

position:55754:1
position: 55754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55996:1
position: 55996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55754-55996:1:exon

DNL43_RS11930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11930
old locus tag: DNL43_12055
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003554089.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GlsB/YeaQ/YmgE family stress response membrane protein
translation: MGFIWAIIVGAVIGALAGAITNNGQSMGWIANIVAGLIGSAIGQALLGSWGPSLAGMALIPSIIGAVILVLIVSFVVKRS
SIO_010081: DNL43_RS11930
subclass of: SO_0000673
so part of: DNL43_RS11930
location: 55754..55996
location: region:55754-55996:1
so has part: feature:55754-55996:1:exon

WP_003560515.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55754-55996:1:exon

DNL43_RS12135
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS12135
so part of: sequence
location: 56014..56166
location: region:56014-56166:1
so has part: feature:56014-56166:1:exon
subclass of: SO_0000010

71568257
type: Gene
SIO_000068: ncbigene

position:56014:1
position: 56014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56166:1
position: 56166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56014-56166:1:exon

DNL43_RS12135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS12135
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003554091.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDALKAVFKFMIASTLIVSGVLLGGTLFATKKIDIFGDKLQNEIYGSKSN
SIO_010081: DNL43_RS12135
subclass of: SO_0000673
so part of: DNL43_RS12135
location: 56014..56166
location: region:56014-56166:1
so has part: feature:56014-56166:1:exon

WP_080467032.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56014-56166:1:exon

DNL43_RS12310
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS12310
old locus tag: DNL43_12060
so part of: sequence
location: 56354..56605
location: region:56354-56605:1
so has part: feature:56354-56605:1:exon
subclass of: SO_0000010

75692409
type: Gene
SIO_000068: ncbigene

position:56354:1
position: 56354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56605:1
position: 56605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56354-56605:1:exon

DNL43_RS12310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS12310
old locus tag: DNL43_12060
inference: COORDINATES: protein motif:HMM:NF013677.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MPTRYDKEFKQNIINLYKQGESAAQLAREYGIGYSTVHKWIQGQAKNQSGKSPDEIKAMEKRLASLSEENEILKKTLGFLAQK
SIO_010081: DNL43_RS12310
subclass of: SO_0000673
so part of: DNL43_RS12310
location: 56354..56605
location: region:56354-56605:1
so has part: feature:56354-56605:1:exon

WP_095347954.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56354-56605:1:exon

DNL43_RS11940
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11940
old locus tag: DNL43_12065
so part of: sequence
location: 56659..57501
location: region:56659-57501:1
so has part: feature:56659-57501:1:exon
subclass of: SO_0000010

71568226
type: Gene
SIO_000068: ncbigene

position:56659:1
position: 56659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57501:1
position: 57501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56659-57501:1:exon

DNL43_RS11940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11940
old locus tag: DNL43_12065
inference: COORDINATES: protein motif:HMM:NF033516.0
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MCRILGVSRAQYYRYRSPKPSKRRAEDEDLKQRILRIFAEFKQRYGVMKIHHELNLELQPLQRRCSPRRISRLMKELDTHSGTVNKWKAASASKTKVEQRPNLLKQDFSTTGLNQKWTADMTYIQTKRNGWCYLSTIMDLHSRRIIGYSFSKKMDTDLVLKTLESAVKNRTITGDLIIHTDLGSQYTSDDYNQRLTELHIRHSYNRKGCPYDNAPMESFHASLKKECVYPVPVFENYETAAAVLFEYVHAFYNRKRIHSSLGYQTPLQVEIATLTSQMAA
SIO_010081: DNL43_RS11940
subclass of: SO_0000673
so part of: DNL43_RS11940
location: 56659..57501
location: region:56659-57501:1
so has part: feature:56659-57501:1:exon

WP_109249240.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56659-57501:1:exon

DNL43_RS11945
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11945
old locus tag: DNL43_12070
pseudo: true
so part of: sequence
location: complement(<57626..57871)
location: region:57626-57871:-1
so has part: feature:57626-57871:-1:exon
subclass of: SO_0000010

71568227
type: Gene
SIO_000068: ncbigene

position:57626:-1
position: 57626
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:57871:-1
position: 57871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57626-57871:-1:exon

DNL43_RS11945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11945
old locus tag: DNL43_12070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013355080.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
SIO_010081: DNL43_RS11945
subclass of: SO_0000673
so part of: DNL43_RS11945
location: complement(<57626..57871)
location: region:57626-57871:-1
so has part: feature:57626-57871:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:57626-57871:-1:exon

DNL43_RS11950
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11950
old locus tag: DNL43_12075
so part of: sequence
location: 58057..58977
location: region:58057-58977:1
so has part: feature:58057-58977:1:exon
subclass of: SO_0000010

71568228
type: Gene
SIO_000068: ncbigene

position:58057:1
position: 58057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58977:1
position: 58977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58057-58977:1:exon

DNL43_RS11950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11950
old locus tag: DNL43_12075
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003646535.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: prenyltransferase
translation: MDIPTRRQQFKALVQAQSTVISALPYLLGCAFTYFYYDHFNIGDAARLFIAVICFHLAVNGHNQYTDYRRFNASGSVSENNIIAKFKISLSWARLIIGSLVLLSAVIGIYLTFKTGWPLLLIGLLSFLIGYAYSGGPHPILKTPLGEPASGITMGYNITLLAIYVNIYNSPQFDPFFWLKGLIVALPAILVISNVMLGNNICDRDEDIQIGKHTLVYYIGRSAAMKVLIACYVLSYIMIIVAVVLHYLPVLTLLSLVTIPIVYQRIKVFVQHPDKMTTFFNILIGLQLILVSEILFTIIGIIIKVI
SIO_010081: DNL43_RS11950
subclass of: SO_0000673
so part of: DNL43_RS11950
location: 58057..58977
location: region:58057-58977:1
so has part: feature:58057-58977:1:exon

WP_003646535.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58057-58977:1:exon

DNL43_RS12260
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS12260
pseudo: true
so part of: sequence
location: 59087..>59308
location: region:59087-59308:1
so has part: feature:59087-59308:1:exon
subclass of: SO_0000010

71568282
type: Gene
SIO_000068: ncbigene

position:59087:1
position: 59087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59308:1
position: 59308
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59087-59308:1:exon

DNL43_RS12260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS12260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611862.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: DNL43_RS12260
subclass of: SO_0000673
so part of: DNL43_RS12260
location: 59087..>59308
location: region:59087-59308:1
so has part: feature:59087-59308:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:59087-59308:1:exon

DNL43_RS11960
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11960
old locus tag: DNL43_12085
pseudo: true
so part of: sequence
location: complement(<59411..59757)
location: region:59411-59757:-1
so has part: feature:59411-59757:-1:exon
subclass of: SO_0000010

71568229
type: Gene
SIO_000068: ncbigene

position:59411:-1
position: 59411
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:59757:-1
position: 59757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59411-59757:-1:exon

DNL43_RS11960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11960
old locus tag: DNL43_12085
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013727908.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: DNL43_RS11960
subclass of: SO_0000673
so part of: DNL43_RS11960
location: complement(<59411..59757)
location: region:59411-59757:-1
so has part: feature:59411-59757:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:59411-59757:-1:exon

DNL43_RS11965
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11965
old locus tag: DNL43_12090
so part of: sequence
location: 60067..61014
location: region:60067-61014:1
so has part: feature:60067-61014:1:exon
subclass of: SO_0000010

71568230
type: Gene
SIO_000068: ncbigene

position:60067:1
position: 60067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61014:1
position: 61014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60067-61014:1:exon

DNL43_RS11965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11965
old locus tag: DNL43_12090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016176888.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: magnesium transporter CorA family protein
translation: MLKTYSLTTDTLLVSSESDIKNSSVVYVYGDEREYIESFEHKYDLKIGNILTFDDQVAYDTMIDRNDEKNFLVSFLFPKIHEGGHLDNLTTSVVFLVFKNKLIIFTNQKLNSISELLSNMVLRDINNFTEEVLLKIMQKDFYAMLNDLRGIKEKIDDLDSKISTSGPLRPTFGDLLTLQKYMIALSSTYKANHKELDFIKKNFTTIDDIDFSTKKIIDDLYDTSDTMDRIILGYSQYLDNLENMINNMISYQLNMIMKTLTEISIILTIPAIIFGFWGINVDVPFEKSSYGFFAVLIISVILSLICWFWLRRKKY
SIO_010081: DNL43_RS11965
subclass of: SO_0000673
so part of: DNL43_RS11965
location: 60067..61014
location: region:60067-61014:1
so has part: feature:60067-61014:1:exon

WP_095347957.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60067-61014:1:exon

DNL43_RS11970
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11970
old locus tag: DNL43_12095
so part of: sequence
location: complement(61118..61633)
location: region:61118-61633:-1
so has part: feature:61118-61633:-1:exon
subclass of: SO_0000010

71568231
type: Gene
SIO_000068: ncbigene

position:61118:-1
position: 61118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61633:-1
position: 61633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61118-61633:-1:exon

DNL43_RS11970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11970
old locus tag: DNL43_12095
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005875614.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dihydrofolate reductase family protein
translation: MAKIFFYGAVSLDGYLSDVNDGLQWLFDTEVGDKLTTDAFLDTVETVVMGRITYEEARKYVQPLYPGKDVVVFTHNTNFDVQEGFAVSEDPVDYLRKLKEQPSGNIWVVGGVNLLKNIIVADLIDEWWIQIALVLLGNGKRLFEQSDYQTRLELIDITQMKQLTELHFRRN
SIO_010081: DNL43_RS11970
subclass of: SO_0000673
so part of: DNL43_RS11970
location: complement(61118..61633)
location: region:61118-61633:-1
so has part: feature:61118-61633:-1:exon

WP_054769888.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61118-61633:-1:exon

DNL43_RS11975
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11975
old locus tag: DNL43_12100
so part of: sequence
location: 62126..62890
location: region:62126-62890:1
so has part: feature:62126-62890:1:exon
subclass of: SO_0000010

71568232
type: Gene
SIO_000068: ncbigene

position:62126:1
position: 62126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62890:1
position: 62890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62126-62890:1:exon

DNL43_RS11975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11975
old locus tag: DNL43_12100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011668989.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MSFKDDIKTLRRQSNLTQEALAQKLHVTRQTVSTWETGKNMPSLETLHALSQLFNISLEKLLFNEEIAMKKDKEPSLATQIDHDVKLKSRYRRWTFGLGGLIVLALVSIGILCLGYYKGIGTIDRFDPFLSYKVGYTKLPSEKEISPNNKATNGYWTAWFTDNTMGNEWTKLTLTTGLNPGVKDPYVMAYHKGSYVKVARIVPRTYINQTYVSNLAALDALLNNKGNTATNNHDLKKYKTQIHISDIVQQLVTE
SIO_010081: DNL43_RS11975
subclass of: SO_0000673
so part of: DNL43_RS11975
location: 62126..62890
location: region:62126-62890:1
so has part: feature:62126-62890:1:exon

WP_095347958.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62126-62890:1:exon

DNL43_RS11980
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11980
old locus tag: DNL43_12105
so part of: sequence
location: complement(63035..63379)
location: region:63035-63379:-1
so has part: feature:63035-63379:-1:exon
subclass of: SO_0000010

71568233
type: Gene
SIO_000068: ncbigene

position:63035:-1
position: 63035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63379:-1
position: 63379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63035-63379:-1:exon

DNL43_RS11980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11980
old locus tag: DNL43_12105
EC number: 3.1.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011241744.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system PemK/MazF family toxin
translation: MVSQGDIFYVNFNPSRGHEQMNKRPAIALSNDLVCQTSNMTIVAPISSTERNFPMYHRLTSSQTVHGKVLLDQTIALDLRARHVTDEAIVDHVSREELEEIIFLYKLLFSIDDE
SIO_010081: DNL43_RS11980
subclass of: SO_0000673
so part of: DNL43_RS11980
location: complement(63035..63379)
location: region:63035-63379:-1
so has part: feature:63035-63379:-1:exon

WP_095347959.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63035-63379:-1:exon

DNL43_RS11985
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11985
old locus tag: DNL43_12110
so part of: sequence
location: complement(63373..63636)
location: region:63373-63636:-1
so has part: feature:63373-63636:-1:exon
subclass of: SO_0000010

71568234
type: Gene
SIO_000068: ncbigene

position:63373:-1
position: 63373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63636:-1
position: 63636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63373-63636:-1:exon

DNL43_RS11985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11985
old locus tag: DNL43_12110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003715897.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AbrB/MazE/SpoVT family DNA-binding domain-containing protein
translation: MELIKEQTRLAKWGNSKAARIPSQIIKQLKLDDNQDMTITIENGSIVLTPIKKNPTNIHELFKDWQDDGKRDHELDWGKSEGNELQW
SIO_010081: DNL43_RS11985
subclass of: SO_0000673
so part of: DNL43_RS11985
location: complement(63373..63636)
location: region:63373-63636:-1
so has part: feature:63373-63636:-1:exon

WP_001748109.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63373-63636:-1:exon

DNL43_RS11990
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11990
old locus tag: DNL43_12115
so part of: sequence
location: 63954..64922
location: region:63954-64922:1
so has part: feature:63954-64922:1:exon
subclass of: SO_0000010

71568235
type: Gene
SIO_000068: ncbigene

position:63954:1
position: 63954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64922:1
position: 64922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63954-64922:1:exon

DNL43_RS11990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11990
old locus tag: DNL43_12115
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003555476.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS30 family transposase
translation: MTYTHLTIDELTTIYSFWKLNKKAYRVAPALHRSAETVYRIYRFLDAGGTLIDYQQHYRRHKQHCGRKPIQLAPDELVYIQAKIQAGWQPDTIINRHERSFSCGVRTLYRIFKHDAFGLFAKDLPMHGQRHPNGYVERRGKAGQLGRDLKTRYQDYPNFKREFGHLEDDTVQGKNHQGAVTTLVERQTKVAIVLNSHTKSSQNVNRSLAAWLTKLPRHLFKSITFDNGKEFAGWRTIANQFDLNIYFAAVGAPNQRGLNENTNNLLRKDGLHHDLIMDQLSDEFVQAVASRRNHIPRKSLNYQTPLEAFVNQITDEQLKFLT
SIO_010081: DNL43_RS11990
subclass of: SO_0000673
so part of: DNL43_RS11990
location: 63954..64922
location: region:63954-64922:1
so has part: feature:63954-64922:1:exon

WP_156645097.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63954-64922:1:exon

DNL43_RS11995
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS11995
old locus tag: DNL43_12120
so part of: sequence
location: complement(64956..65312)
location: region:64956-65312:-1
so has part: feature:64956-65312:-1:exon
subclass of: SO_0000010

71568236
type: Gene
SIO_000068: ncbigene

position:64956:-1
position: 64956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65312:-1
position: 65312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64956-65312:-1:exon

DNL43_RS11995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS11995
old locus tag: DNL43_12120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002834562.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system YafQ family toxin
translation: MKKLRFKPRATFNADLKRLASLDKSIIDEVRAAIDLLLEQQQLPPEFEDHELNRRMSGYNEFHLRDTPKNKTPSETNDVLVVYTIDKDELVLIGIRVGSHDRLFPGQNRSKRYRKNDE
SIO_010081: DNL43_RS11995
subclass of: SO_0000673
so part of: DNL43_RS11995
location: complement(64956..65312)
location: region:64956-65312:-1
so has part: feature:64956-65312:-1:exon

WP_002834562.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64956-65312:-1:exon

DNL43_RS12000
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS12000
old locus tag: DNL43_12125
so part of: sequence
location: complement(65312..65590)
location: region:65312-65590:-1
so has part: feature:65312-65590:-1:exon
subclass of: SO_0000010

71568237
type: Gene
SIO_000068: ncbigene

position:65590:-1
position: 65590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65312-65590:-1:exon

DNL43_RS12000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS12000
old locus tag: DNL43_12125
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003586674.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system prevent-host-death family antitoxin
translation: MTLALTQSDFRANLKKYLDQVNDEDETVYIARSNSRAVAIVSQEKMDWLERALKAKEGSLEYAIARDQLIKRHVLPDDEIVESNDDYWGQFK
SIO_010081: DNL43_RS12000
subclass of: SO_0000673
so part of: DNL43_RS12000
location: complement(65312..65590)
location: region:65312-65590:-1
so has part: feature:65312-65590:-1:exon

WP_002834561.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65312-65590:-1:exon

DNL43_RS12005
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS12005
old locus tag: DNL43_12130
so part of: sequence
location: complement(65727..66514)
location: region:65727-66514:-1
so has part: feature:65727-66514:-1:exon
subclass of: SO_0000010

71568238
type: Gene
SIO_000068: ncbigene

position:65727:-1
position: 65727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66514:-1
position: 66514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65727-66514:-1:exon

DNL43_RS12005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS12005
old locus tag: DNL43_12130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013727908.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MPNYPSNITCQQFEVIRSELENFCQRTKPRQVDLYDVFCAILYILKTGAQWRALPHDFPKWQTVYTYFRLWSRQPTPAEPSLLDQVFKKIVATLRSKQDRSALTSFIIVDAQSVKNTETAENKGYDAGKKISGIKRHLAVDMNGFPQAIHLTRANVSDRDGASAMLALNAENLRRVRSVLVDGGYSGRNFAMDVQLNLKATTQVAKRNELPKFEVLPQRWIIERSFSWLEKYRRLWKNCERQLHTSTTMVTLAFVSVFLRRF
SIO_010081: DNL43_RS12005
subclass of: SO_0000673
so part of: DNL43_RS12005
location: complement(join(65727..66256,66256..66514))
location: region:65727-66514:-1
so has part: feature:66256-66514:-1:exon
so has part: feature:65727-66256:-1:exon

WP_109249239.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66256-66514:-1:exon

position:66256:-1
position: 66256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:65727-66256:-1:exon

DNL43_RS12140
type: Gene
subclass of: SO_0000704
RO_0002162: 33962
locus tag: DNL43_RS12140
old locus tag: DNL43_12135
so part of: sequence
location: 66644..67153
location: region:66644-67153:1
so has part: feature:66644-67153:1:exon
subclass of: SO_0000010

71568258
type: Gene
SIO_000068: ncbigene

position:66644:1
position: 66644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67153:1
position: 67153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66644-67153:1:exon

DNL43_RS12140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33962
locus tag: DNL43_RS12140
old locus tag: DNL43_12135
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003623743.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Mobilization protein MobB
translation: MTQLNQTIAELRNYQGTQIQLQATAKTSLDQQLRQIEQTAQQVNQQFQTTLNNLDSSNANSQPQLKQTLQSAYATFQKQTNLISQENLTALKRIQTEQGQNNQRLSQLSDQVNQAIQETLAQVANQVEQQLQTTKRRFSWYEIKNYLLAVIPTGILTGLIFWLLIRYFG
SIO_010081: DNL43_RS12140
subclass of: SO_0000673
so part of: DNL43_RS12140
location: 66644..67153
location: region:66644-67153:1
so has part: feature:66644-67153:1:exon

WP_179286863.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66644-67153:1:exon