Mycoplasmopsis felis strain Myco-2 chromosome, complete genome.
Bacteria; Mycoplasmatota; Mollicutes; Mycoplasmataceae; Mycoplasmopsis.
Complete genome sequence of Mycoplasma felis strain Myco-2
Submitted (16-JAN-2020) Contact:Yuta Kinoshita Equine Research Institute; 1400-4 Shiba, Shimotsuke, Tochigi 329-0412, Japan
REFSEQ INFORMATION: The reference sequence is identical to\nAP022325.1.\nAnnotated by DFAST v.1.2.4 (https://dfast.nig.ac.jp).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Unicycler v. 0.4.8\nGenome Coverage :: 767x\nSequencing Technology :: Oxford Nanopore MinION; IonPGM\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 10/19/2022 05:41:45\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 781\nCDSs (total) :: 740\nGenes (coding) :: 729\nCDSs (with protein) :: 729\nGenes (RNA) :: 41\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 29\nncRNAs :: 3\nPseudo Genes (total) :: 11\nCDSs (without protein) :: 11\nPseudo Genes (ambiguous residues) :: 0 of 11\nPseudo Genes (frameshifted) :: 1 of 11\nPseudo Genes (incomplete) :: 5 of 11\nPseudo Genes (internal stop) :: 5 of 11\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF012915.2
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011283169.1
RNA-binding S4 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004795313.1
GO:0015109 - chromate transmembrane transporter activity [Evidence IEA]
GO:0015703 - chromate transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF014471.2
COORDINATES: similar to AA sequence:RefSeq:WP_015286999.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011283519.1
GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004796013.1
GO:0003674 - molecular_function [Evidence IEA]
GO:0008150 - biological_process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004795304.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004796015.1
GO:0006166 - purine ribonucleoside salvage [Evidence IEA]
COORDINATES: protein motif:HMM:NF013860.2
COORDINATES: similar to AA sequence:RefSeq:WP_004795785.1
COORDINATES: similar to AA sequence:RefSeq:WP_004796726.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011283456.1
COORDINATES: similar to AA sequence:RefSeq:WP_013456196.1
GO:0004845 - uracil phosphoribosyltransferase activity [Evidence IEA]
GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013622.2
COORDINATES: similar to AA sequence:RefSeq:WP_004796479.1
COORDINATES: similar to AA sequence:RefSeq:WP_004797158.1
COORDINATES: similar to AA sequence:RefSeq:WP_013448073.1
COORDINATES: protein motif:HMM:TIGR04313.1
COORDINATES: protein motif:HMM:TIGR02012.1
GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020002849.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: similar to AA sequence:RefSeq:WP_013054700.1
GO:0005887 - integral component of plasma membrane [Evidence IEA]
GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO:0043952 - protein transport by the Sec complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015286916.1
COORDINATES: similar to AA sequence:RefSeq:WP_013354845.1
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011283714.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004025773.1
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015286921.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004023933.1
COORDINATES: similar to AA sequence:RefSeq:WP_004796152.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
DNA-directed RNA polymerase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_015286924.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010320988.1
COORDINATES: protein motif:HMM:NF013579.2
GO:0006304 - DNA modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF012579.2
COORDINATES: similar to AA sequence:RefSeq:WP_004795903.1
COORDINATES: similar to AA sequence:RefSeq:WP_004795258.1
GO:0004743 - pyruvate kinase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015287008.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005683463.1
Nif3-like dinuclear metal center hexameric protein
COORDINATES: similar to AA sequence:RefSeq:WP_013054143.1
COORDINATES: protein motif:HMM:TIGR01391.1
GO:0003896 - DNA primase activity [Evidence IEA]
GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004795073.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF020048.2
COORDINATES: similar to AA sequence:RefSeq:WP_004024266.1
tRNA (cytidine(34)-2'-O)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004795981.1
COORDINATES: similar to AA sequence:RefSeq:WP_005683764.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005683297.1
COORDINATES: similar to AA sequence:RefSeq:WP_006886649.1
COORDINATES: similar to AA sequence:RefSeq:WP_005683402.1
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: protein motif:HMM:NF013383.2
NAD(P)-binding domain-containing protein
COORDINATES: protein motif:HMM:NF014186.2
COORDINATES: similar to AA sequence:RefSeq:WP_006608397.1
GO:0004526 - ribonuclease P activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006886182.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004796541.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF013752.2
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010321214.1
COORDINATES: similar to AA sequence:RefSeq:WP_006886705.1
COORDINATES: similar to AA sequence:RefSeq:WP_004795635.1
COORDINATES: protein motif:HMM:NF019887.2
COORDINATES: similar to AA sequence:RefSeq:WP_004794616.1
GO:0004731 - purine-nucleoside phosphorylase activity [Evidence IEA]
GO:0043096 - purine nucleobase salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004023924.1
GO:0016154 - pyrimidine-nucleoside phosphorylase activity [Evidence IEA]
GO:0006213 - pyrimidine nucleoside metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004796679.1
GO:0004139 - deoxyribose-phosphate aldolase activity [Evidence IEA]
GO:0009264 - deoxyribonucleotide catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004416338.1
COORDINATES: similar to AA sequence:RefSeq:WP_012498071.1
COORDINATES: similar to AA sequence:RefSeq:WP_004795262.1
GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004796429.1
GO:0004816 - asparagine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04526.1
GO:0005515 - protein binding [Evidence IEA]
putative immunoglobulin-blocking virulence protein
COORDINATES: similar to AA sequence:RefSeq:WP_004797262.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: similar to AA sequence:RefSeq:WP_013054377.1
sigma factor-like helix-turn-helix DNA-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_015510731.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]
signal recognition particle-docking protein FtsY
COORDINATES: similar to AA sequence:RefSeq:WP_004794463.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00168
Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis, transport and catabolism; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_013054465.1
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004794752.1
COORDINATES: similar to AA sequence:RefSeq:WP_004795768.1
COORDINATES: similar to AA sequence:RefSeq:WP_013054230.1
COORDINATES: protein motif:HMM:NF012235.2
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003245567.1
COORDINATES: protein motif:HMM:NF024438.2
COORDINATES: similar to AA sequence:RefSeq:WP_004426901.1
nicotinamide mononucleotide transporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004796176.1
GO:0003999 - adenine phosphoribosyltransferase activity [Evidence IEA]
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: protein motif:HMM:NF012956.2
COORDINATES: protein motif:HMM:NF019192.2
COORDINATES: protein motif:HMM:NF033559.1
COORDINATES: similar to AA sequence:RefSeq:WP_004796974.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014679.2
COORDINATES: similar to AA sequence:RefSeq:WP_013054311.1
GO:0019843 - rRNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013354641.1
COORDINATES: similar to AA sequence:RefSeq:WP_015287277.1
COORDINATES: similar to AA sequence:RefSeq:WP_004796779.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004797 - thymidine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015286989.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005683250.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015287382.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010874777.1
COORDINATES: similar to AA sequence:RefSeq:WP_013302092.1
GO:0008081 - phosphoric diester hydrolase activity [Evidence IEA]
GO:0006629 - lipid metabolic process [Evidence IEA]
glycerophosphodiester phosphodiesterase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004794209.1
GO:0004370 - glycerol kinase activity [Evidence IEA]
GO:0006071 - glycerol metabolic process [Evidence IEA]
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012751239.1
COORDINATES: similar to AA sequence:RefSeq:WP_004796570.1
GO:0004371 - glycerone kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015287378.1
COORDINATES: similar to AA sequence:RefSeq:WP_004794217.1
COORDINATES: protein motif:HMM:TIGR00613.1
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013354744.1
COORDINATES: similar to AA sequence:RefSeq:WP_015287647.1
GO:0043811 - phosphate:acyl-[acyl carrier protein] acyltransferase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015287646.1
GO:0004525 - ribonuclease III activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013054425.1
COORDINATES: protein motif:HMM:NF013768.2
heat-inducible transcriptional repressor HrcA
COORDINATES: protein motif:HMM:NF013212.2
GO:0000774 - adenyl-nucleotide exchange factor activity [Evidence IEA]; GO:0051087 - chaperone binding [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004796660.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004797146.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004797145.1
COORDINATES: similar to AA sequence:RefSeq:WP_016340207.1
type III restriction endonuclease subunit M
COORDINATES: similar to AA sequence:RefSeq:WP_004796054.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006886279.1
COORDINATES: similar to AA sequence:RefSeq:WP_015287068.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
ribosome small subunit-dependent GTPase A
COORDINATES: protein motif:HMM:NF012298.2
COORDINATES: similar to AA sequence:RefSeq:WP_013527123.1
GO:0004385 - guanylate kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004795426.1
GO:0004730 - pseudouridylate synthase activity [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004796521.1
COORDINATES: protein motif:HMM:NF013621.2
COORDINATES: similar to AA sequence:RefSeq:WP_004024390.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004795432.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006886884.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013421.2
COORDINATES: similar to AA sequence:RefSeq:WP_004796248.1
COORDINATES: similar to AA sequence:RefSeq:WP_011949713.1
COORDINATES: similar to AA sequence:RefSeq:WP_004794230.1
COORDINATES: similar to AA sequence:RefSeq:WP_004794806.1
GO:0050661 - NADP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005683492.1
GO:0015267 - channel activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004794767.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00059
TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF018367.2
COORDINATES: similar to AA sequence:RefSeq:WP_005683520.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0032549 - ribonucleoside binding [Evidence IEA]
DNA-directed RNA polymerase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_011283622.1
DNA-directed RNA polymerase subunit beta'
COORDINATES: similar to AA sequence:RefSeq:WP_004794556.1
COORDINATES: similar to AA sequence:RefSeq:WP_004797039.1
GO:0008776 - acetate kinase activity [Evidence IEA]
GO:0006083 - acetate metabolic process [Evidence IEA]; GO:0006113 - fermentation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013354425.1
GO:0004595 - pantetheine-phosphate adenylyltransferase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
pantetheine-phosphate adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004796178.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
ribosome biogenesis GTP-binding protein YihA/YsxC
COORDINATES: protein motif:HMM:TIGR00115.1
GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015287718.1
COORDINATES: protein motif:HMM:NF012210.0
COORDINATES: similar to AA sequence:RefSeq:WP_005683566.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014886665.1
COORDINATES: similar to AA sequence:RefSeq:WP_006608411.1
COORDINATES: similar to AA sequence:RefSeq:WP_015287153.1
COORDINATES: similar to AA sequence:RefSeq:WP_004797067.1
COORDINATES: similar to AA sequence:RefSeq:WP_010869302.1
COORDINATES: protein motif:HMM:NF024863.2
COORDINATES: similar to AA sequence:RefSeq:WP_004794938.1
COORDINATES: similar to AA sequence:RefSeq:WP_013054635.1
GO:0008965 - phosphoenolpyruvate-protein phosphotransferase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0006808 - regulation of nitrogen utilization [Evidence IEA]
phosphoenolpyruvate--protein phosphotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_006886807.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006608841.1
GO:0016791 - phosphatase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004796451.1
GO:0016021 - integral component of membrane [Evidence IEA]
GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
GO:0009249 - protein lipoylation [Evidence IEA]
prolipoprotein diacylglyceryl transferase
COORDINATES: similar to AA sequence:RefSeq:WP_011264704.1
COORDINATES: similar to AA sequence:RefSeq:WP_004794246.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011283442.1
bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_004794251.1
COORDINATES: similar to AA sequence:RefSeq:WP_010925199.1
COORDINATES: similar to AA sequence:RefSeq:WP_004023838.1
COORDINATES: similar to AA sequence:RefSeq:WP_006886374.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004797059.1
COORDINATES: protein motif:HMM:NF012651.2
COORDINATES: similar to AA sequence:RefSeq:WP_004794522.1
COORDINATES: similar to AA sequence:RefSeq:WP_013302040.1
COORDINATES: similar to AA sequence:RefSeq:WP_004795649.1
COORDINATES: protein motif:HMM:NF020118.2
COORDINATES: similar to AA sequence:RefSeq:WP_004796174.1
COORDINATES: similar to AA sequence:RefSeq:WP_004794452.1
COORDINATES: similar to AA sequence:RefSeq:WP_013354511.1
COORDINATES: similar to AA sequence:RefSeq:WP_011283740.1
COORDINATES: similar to AA sequence:RefSeq:WP_004796342.1
COORDINATES: similar to AA sequence:RefSeq:WP_005683116.1
COORDINATES: similar to AA sequence:RefSeq:WP_006886905.1
division/cell wall cluster transcriptional repressor MraZ
COORDINATES: similar to AA sequence:RefSeq:WP_005683122.1
GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
COORDINATES: similar to AA sequence:RefSeq:WP_015287298.1
COORDINATES: protein motif:HMM:NF024486.2
COORDINATES: similar to AA sequence:RefSeq:WP_004795916.1
helix-turn-helix transcriptional regulator
COORDINATES: protein motif:HMM:NF012869.2
COORDINATES: similar to AA sequence:RefSeq:WP_015287293.1
COORDINATES: similar to AA sequence:RefSeq:WP_004794624.1
COORDINATES: protein motif:HMM:NF012413.2
COORDINATES: similar to AA sequence:RefSeq:WP_006886493.1
COORDINATES: similar to AA sequence:RefSeq:WP_004795748.1
COORDINATES: similar to AA sequence:RefSeq:WP_004795749.1
COORDINATES: similar to AA sequence:RefSeq:WP_004797053.1
GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004794504.1
COORDINATES: similar to AA sequence:RefSeq:WP_004794503.1
GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
class II fructose-1,6-bisphosphate aldolase
COORDINATES: similar to AA sequence:RefSeq:WP_011949846.1
GO:0008444 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004796364.1
GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013954838.1
DNA integrity scanning protein DisA nucleotide-binding domain protein
COORDINATES: similar to AA sequence:RefSeq:WP_004796114.1
GO:0004071 - aspartate-ammonia ligase activity [Evidence IEA]
GO:0006529 - asparagine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004794909.1
replication-associated recombination protein A
COORDINATES: similar to AA sequence:RefSeq:WP_015287327.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
phenylalanine--tRNA ligase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_020002953.1
GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013054594.1
COORDINATES: similar to AA sequence:RefSeq:WP_013054504.1
COORDINATES: similar to AA sequence:RefSeq:WP_004794966.1
COORDINATES: similar to AA sequence:RefSeq:WP_010924872.1
COORDINATES: similar to AA sequence:RefSeq:WP_013954629.1
GO:0052913 - 16S rRNA (guanine(966)-N(2))-methyltransferase activity [Evidence IEA]
GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
COORDINATES: protein motif:HMM:TIGR00479.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
COORDINATES: similar to AA sequence:RefSeq:WP_004794495.1
GO:0006450 - regulation of translational fidelity [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00023
COORDINATES: protein motif:HMM:NF015210.2
COORDINATES: similar to AA sequence:RefSeq:WP_004794499.1
COORDINATES: protein motif:HMM:NF012774.2
COORDINATES: similar to AA sequence:RefSeq:WP_011264999.1
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
4'-phosphopantetheinyl transferase superfamily protein
COORDINATES: similar to AA sequence:RefSeq:WP_015287252.1
lysophospholipid acyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006608425.1
COORDINATES: similar to AA sequence:RefSeq:WP_004794236.1
GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004795703.1
COORDINATES: similar to AA sequence:RefSeq:WP_013526681.1
COORDINATES: similar to AA sequence:RefSeq:WP_004794593.1
COORDINATES: similar to AA sequence:RefSeq:WP_013022336.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
COORDINATES: similar to AA sequence:RefSeq:WP_015287186.1
YhjD/YihY/BrkB family envelope integrity protein
COORDINATES: protein motif:HMM:NF021427.2
COORDINATES: protein motif:HMM:NF022525.2
COORDINATES: similar to AA sequence:RefSeq:WP_013729261.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004795285.1
COORDINATES: similar to AA sequence:RefSeq:WP_004795287.1
COORDINATES: similar to AA sequence:RefSeq:WP_004796390.1
GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024729.2
GO:0015074 - DNA integration [Evidence IEA]
COORDINATES: protein motif:HMM:NF023978.2
COORDINATES: similar to AA sequence:RefSeq:WP_010925200.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006886653.1
GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]
GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015377.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]
cysteine peptidase family C39 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004024295.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004794865.1
GO:0004126 - cytidine deaminase activity [Evidence IEA]
GO:0008655 - pyrimidine-containing compound salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013354351.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004796788.1
COORDINATES: protein motif:HMM:NF013327.2
COORDINATES: similar to AA sequence:RefSeq:WP_006886685.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010875019.1
GO:0033743 - peptide-methionine (R)-S-oxide reductase activity [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
peptide-methionine (R)-S-oxide reductase MsrB
COORDINATES: similar to AA sequence:RefSeq:WP_004796210.1
COORDINATES: similar to AA sequence:RefSeq:WP_010320981.1
COORDINATES: similar to AA sequence:RefSeq:WP_017698162.1
COORDINATES: similar to AA sequence:RefSeq:WP_013054588.1
COORDINATES: similar to AA sequence:RefSeq:WP_015287119.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013054532.1
COORDINATES: similar to AA sequence:RefSeq:WP_005683453.1
GO:0004347 - glucose-6-phosphate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020003094.1
GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004794825.1
23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
COORDINATES: similar to AA sequence:RefSeq:WP_005683642.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]; GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
COORDINATES: similar to AA sequence:RefSeq:WP_004797150.1
GO:0008176 - tRNA (guanine-N7-)-methyltransferase activity [Evidence IEA]
tRNA (guanosine(46)-N7)-methyltransferase TrmB
COORDINATES: similar to AA sequence:RefSeq:WP_004796197.1
COORDINATES: similar to AA sequence:RefSeq:WP_004794526.1
COORDINATES: similar to AA sequence:RefSeq:WP_015287541.1
COORDINATES: similar to AA sequence:RefSeq:WP_020003254.1
COORDINATES: similar to AA sequence:RefSeq:WP_011283557.1
COORDINATES: protein motif:HMM:NF012311.2
COORDINATES: similar to AA sequence:RefSeq:WP_015287177.1
GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006886634.1
COORDINATES: similar to AA sequence:RefSeq:WP_004794577.1
COORDINATES: similar to AA sequence:RefSeq:WP_004794575.1
COORDINATES: similar to AA sequence:RefSeq:WP_004794573.1
COORDINATES: similar to AA sequence:RefSeq:WP_004794571.1
GO:0000276 - mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045264 - plasma membrane proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013054208.1
COORDINATES: similar to AA sequence:RefSeq:WP_015287170.1
COORDINATES: protein motif:HMM:NF021069.2
COORDINATES: similar to AA sequence:RefSeq:WP_004797099.1
COORDINATES: protein motif:HMM:NF016146.2
GO:0004518 - nuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004024017.1
COORDINATES: similar to AA sequence:RefSeq:WP_004794421.1
GO:0015934 - large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004797056.1
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0008973 - phosphopentomutase activity [Evidence IEA]
GO:0043094 - cellular metabolic compound salvage [Evidence IEA]; GO:0009117 - nucleotide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004795891.1
COORDINATES: protein motif:HMM:NF018855.2
COORDINATES: similar to AA sequence:RefSeq:WP_004795979.1
fibronectin type III domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004794360.1
COORDINATES: similar to AA sequence:RefSeq:WP_006608738.1
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005683267.1
bifunctional oligoribonuclease/PAP phosphatase NrnA
COORDINATES: similar to AA sequence:RefSeq:WP_004796697.1
COORDINATES: similar to AA sequence:RefSeq:WP_004796691.1
COORDINATES: similar to AA sequence:RefSeq:WP_004794644.1
COORDINATES: similar to AA sequence:RefSeq:WP_004794643.1
COORDINATES: similar to AA sequence:RefSeq:WP_014829958.1
COORDINATES: protein motif:HMM:NF015276.2
COORDINATES: similar to AA sequence:RefSeq:WP_004794632.1
GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004024370.1
tRNA1(Val) (adenine(37)-N6)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004794628.1
GO:0008997 - ribonuclease R activity [Evidence IEA]
GO:0006401 - RNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006608870.1
COORDINATES: similar to AA sequence:RefSeq:WP_011283665.1
5'-3' exonuclease H3TH domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004795046.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004795050.1
COORDINATES: protein motif:HMM:NF012745.2
COORDINATES: similar to AA sequence:RefSeq:WP_013021874.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0009378 - four-way junction helicase activity [Evidence IEA]
Holliday junction branch migration DNA helicase RuvB
COORDINATES: similar to AA sequence:RefSeq:WP_015287196.1
Holliday junction branch migration protein RuvA
COORDINATES: similar to AA sequence:RefSeq:WP_011283326.1
COORDINATES: similar to AA sequence:RefSeq:WP_006886859.1
helix-hairpin-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004797215.1
COORDINATES: similar to AA sequence:RefSeq:WP_015287301.1
GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
peptide chain release factor N(5)-glutamine methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011283345.1
GO:0016149 - translation release factor activity, codon specific [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014335388.1
GO:0033744 - L-methionine:thioredoxin-disulfide S-oxidoreductase activity [Evidence IEA]; GO:0008113 - peptide-methionine (S)-S-oxide reductase activity [Evidence IEA]
peptide-methionine (S)-S-oxide reductase MsrA
COORDINATES: similar to AA sequence:RefSeq:WP_004796234.1
COORDINATES: similar to AA sequence:RefSeq:WP_004795030.1
COORDINATES: similar to AA sequence:RefSeq:WP_015287333.1
COORDINATES: similar to AA sequence:RefSeq:WP_015287332.1
transcription termination/antitermination protein NusG
COORDINATES: protein motif:HMM:NF024910.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0004140 - dephospho-CoA kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013054544.1
GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013216.2
transcription antitermination factor NusB
COORDINATES: similar to AA sequence:RefSeq:WP_004795331.1
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: protein motif:HMM:NF013738.2
iron-sulfur cluster assembly scaffold protein
COORDINATES: protein motif:HMM:NF013015.2
COORDINATES: similar to AA sequence:RefSeq:WP_013354405.1
nicotinate-nucleotide adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004795339.1
COORDINATES: similar to AA sequence:RefSeq:WP_013354563.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015287029.1
COORDINATES: similar to AA sequence:RefSeq:WP_015287359.1
phospholipase D-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004794702.1
COORDINATES: similar to AA sequence:RefSeq:WP_011949292.1
RpiB/LacA/LacB family sugar-phosphate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_015287557.1
GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO:0009451 - RNA modification [Evidence IEA]
23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
COORDINATES: similar to AA sequence:RefSeq:WP_013021709.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015287570.1
COORDINATES: similar to AA sequence:RefSeq:WP_004797116.1
GO:0046537 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity [Evidence IEA]
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
COORDINATES: similar to AA sequence:RefSeq:WP_011283616.1
GO:0015935 - small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004796567.1
COORDINATES: similar to AA sequence:RefSeq:WP_004795398.1
COORDINATES: similar to AA sequence:RefSeq:WP_015287058.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004795394.1
COORDINATES: similar to AA sequence:RefSeq:WP_013455947.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004795390.1
COORDINATES: similar to AA sequence:RefSeq:WP_002946164.1
COORDINATES: similar to AA sequence:RefSeq:WP_004795387.1
COORDINATES: similar to AA sequence:RefSeq:WP_004795385.1
COORDINATES: similar to AA sequence:RefSeq:WP_004023950.1
COORDINATES: similar to AA sequence:RefSeq:WP_015511243.1
COORDINATES: similar to AA sequence:RefSeq:WP_004795377.1
COORDINATES: similar to AA sequence:RefSeq:WP_004023953.1
COORDINATES: similar to AA sequence:RefSeq:WP_011283773.1
COORDINATES: similar to AA sequence:RefSeq:WP_004795370.1
COORDINATES: similar to AA sequence:RefSeq:WP_004023956.1
COORDINATES: similar to AA sequence:RefSeq:WP_020003153.1
COORDINATES: similar to AA sequence:RefSeq:WP_004796033.1
COORDINATES: similar to AA sequence:RefSeq:WP_004795360.1
COORDINATES: similar to AA sequence:RefSeq:WP_004795358.1
COORDINATES: similar to AA sequence:RefSeq:WP_004796031.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004795356.1
COORDINATES: similar to AA sequence:RefSeq:WP_004796912.1
COORDINATES: similar to AA sequence:RefSeq:WP_015287613.1
COORDINATES: protein motif:HMM:TIGR01427.1
GO:0022877 - protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity [Evidence IEA]
fructose-specific PTS transporter subunit EIIC
COORDINATES: protein motif:HMM:NF014437.2
GO:0022877 - protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity [Evidence IEA]; GO:0008982 - protein-N(PI)-phosphohistidine-sugar phosphotransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015545601.1
COORDINATES: similar to AA sequence:RefSeq:WP_013302467.1
COORDINATES: similar to AA sequence:RefSeq:WP_004795787.1
COORDINATES: protein motif:HMM:NF022351.2
COORDINATES: similar to AA sequence:RefSeq:WP_004796929.1
COORDINATES: protein motif:HMM:NF024702.2
COORDINATES: similar to AA sequence:RefSeq:WP_013302017.1
GO:0008801 - beta-phosphoglucomutase activity [Evidence IEA]
GO:0046352 - disaccharide catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015084072.1
COORDINATES: similar to AA sequence:RefSeq:WP_014335437.1
GO:0003824 - catalytic activity [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004794311.1
COORDINATES: similar to AA sequence:RefSeq:WP_004796601.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013302025.1
COORDINATES: similar to AA sequence:RefSeq:WP_013054351.1
COORDINATES: similar to AA sequence:RefSeq:WP_015084078.1
COORDINATES: similar to AA sequence:RefSeq:WP_015084079.1
COORDINATES: similar to AA sequence:RefSeq:WP_013302029.1
COORDINATES: similar to AA sequence:RefSeq:WP_014335443.1
COORDINATES: similar to AA sequence:RefSeq:WP_015286934.1
COORDINATES: protein motif:HMM:NF012356.2
GO:0034257 - nicotinamide riboside transmembrane transporter activity [Evidence IEA]
GO:0034258 - nicotinamide riboside transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF024787.2
HNH endonuclease domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011283176.1
COORDINATES: similar to AA sequence:RefSeq:WP_013054343.1
GO:0009019 - tRNA (guanine-N1-)-methyltransferase activity [Evidence IEA]
tRNA (guanosine(37)-N1)-methyltransferase TrmD
COORDINATES: similar to AA sequence:RefSeq:WP_004024029.1
COORDINATES: similar to AA sequence:RefSeq:WP_004797013.1
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012372.2
COORDINATES: similar to AA sequence:RefSeq:WP_015287535.1
COORDINATES: similar to AA sequence:RefSeq:WP_004794772.1
DnaB-like helicase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004797120.1
COORDINATES: similar to AA sequence:RefSeq:WP_006886799.1
COORDINATES: similar to AA sequence:RefSeq:WP_015287531.1
COORDINATES: similar to AA sequence:RefSeq:WP_013054704.1
YebC/PmpR family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_005683629.1
GO:0008795 - NAD+ synthase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015286932.1
COORDINATES: similar to AA sequence:RefSeq:WP_015287103.1
GO:0009228 - thiamine biosynthetic process [Evidence IEA]; GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005683343.1
COORDINATES: protein motif:HMM:NF015325.2
COORDINATES: similar to AA sequence:RefSeq:WP_004795034.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_006886528.1
GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
energy-coupling factor transporter ATPase
COORDINATES: similar to AA sequence:RefSeq:WP_006608621.1
COORDINATES: similar to AA sequence:RefSeq:WP_004795140.1
energy-coupling factor transporter transmembrane component T
COORDINATES: similar to AA sequence:RefSeq:WP_005683461.1
GO:0008982 - protein-N(PI)-phosphohistidine-sugar phosphotransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004796252.1
N-acetylmuramic acid 6-phosphate etherase
COORDINATES: similar to AA sequence:RefSeq:WP_004797097.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004797096.1
GO:0004342 - glucosamine-6-phosphate deaminase activity [Evidence IEA]
GO:0006046 - N-acetylglucosamine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015287274.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00011
COORDINATES: similar to AA sequence:RefSeq:WP_005683225.1
COORDINATES: similar to AA sequence:RefSeq:WP_013054270.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0000451 - rRNA 2'-O-methylation [Evidence IEA]
16S rRNA (cytidine(1402)-2'-O)-methyltransferase
COORDINATES: protein motif:HMM:NF024575.2
COORDINATES: similar to AA sequence:RefSeq:WP_013354987.1
GO:0004798 - thymidylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015287686.1
COORDINATES: similar to AA sequence:RefSeq:WP_004795197.1
YbaB/EbfC family nucleoid-associated protein
COORDINATES: protein motif:HMM:NF004046.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004794260.1
DnaJ C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004794842.1
GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004794844.1
GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004795978.1
COORDINATES: similar to AA sequence:RefSeq:WP_004024476.1
COORDINATES: similar to AA sequence:RefSeq:WP_004416331.1
GO:0003725 - double-stranded RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006886247.1
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0019104 - DNA N-glycosylase activity [Evidence IEA]; GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]; GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008534 - oxidized purine nucleobase lesion DNA N-glycosylase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
COORDINATES: similar to AA sequence:RefSeq:WP_015287202.1
isochorismatase family cysteine hydrolase
COORDINATES: protein motif:HMM:NF013844.2
COORDINATES: protein motif:HMM:NF012578.2
COORDINATES: similar to AA sequence:RefSeq:WP_005683949.1
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: similar to AA sequence:RefSeq:WP_004796955.1
COORDINATES: similar to AA sequence:RefSeq:WP_004796954.1
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
COORDINATES: similar to AA sequence:RefSeq:WP_013054322.1
COORDINATES: similar to AA sequence:RefSeq:WP_015084259.1
COORDINATES: protein motif:HMM:NF014068.2
COORDINATES: similar to AA sequence:RefSeq:WP_004795507.1
GO:0042586 - peptide deformylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014690.2
GO:0005886 - plasma membrane [Evidence IEA]
GO:0008374 - O-acyltransferase activity [Evidence IEA]
GO:0006654 - phosphatidic acid biosynthetic process [Evidence IEA]
glycerol-3-phosphate 1-O-acyltransferase PlsY
COORDINATES: similar to AA sequence:RefSeq:WP_011283241.1
COORDINATES: similar to AA sequence:RefSeq:WP_013456157.1
COORDINATES: similar to AA sequence:RefSeq:WP_004797108.1
16S rRNA (uracil(1498)-N(3))-methyltransferase
COORDINATES: protein motif:HMM:NF024783.2
HNH endonuclease signature motif containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_020104579.1
COORDINATES: similar to AA sequence:RefSeq:WP_004795762.1
COORDINATES: similar to AA sequence:RefSeq:WP_011283292.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013021989.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
COORDINATES: similar to AA sequence:RefSeq:WP_006608830.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
COORDINATES: similar to AA sequence:RefSeq:WP_004796945.1
COORDINATES: protein motif:HMM:NF013734.2
COORDINATES: similar to AA sequence:RefSeq:WP_011283758.1
GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF024880.2
COORDINATES: similar to AA sequence:RefSeq:WP_011283759.1
COORDINATES: similar to AA sequence:RefSeq:WP_004794870.1
COORDINATES: similar to AA sequence:RefSeq:WP_011283211.1
COORDINATES: similar to AA sequence:RefSeq:WP_013054539.1
COORDINATES: similar to AA sequence:RefSeq:WP_004024001.1
COORDINATES: similar to AA sequence:RefSeq:WP_004795273.1
DNA starvation/stationary phase protection protein
COORDINATES: similar to AA sequence:RefSeq:WP_015287651.1
COORDINATES: similar to AA sequence:RefSeq:WP_004421043.1
GO:0004127 - cytidylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013456382.1
COORDINATES: similar to AA sequence:RefSeq:WP_004797231.1
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004794185.1
COORDINATES: similar to AA sequence:RefSeq:WP_004794184.1
COORDINATES: similar to AA sequence:RefSeq:WP_011283813.1
GO:0033862 - UMP kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004795514.1
GO:0008135 - translation factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004796666.1
COORDINATES: protein motif:HMM:NF012514.2
signal recognition particle sRNA small type
COORDINATES: nucleotide motif:Rfam:14.4:RF00169
COORDINATES: similar to AA sequence:RefSeq:WP_011283175.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004796888.1
GO:0043937 - regulation of sporulation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013054790.1
GO:0048501 - signal recognition particle, plasma membrane targeting [Evidence IEA]
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005048 - signal sequence binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004794224.1
COORDINATES: similar to AA sequence:RefSeq:WP_004794222.1
COORDINATES: similar to AA sequence:RefSeq:WP_010321346.1
COORDINATES: protein motif:HMM:NF017181.2
COORDINATES: similar to AA sequence:RefSeq:WP_016340238.1
COORDINATES: similar to AA sequence:RefSeq:WP_013301991.1
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006886875.1
GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004795998.1
COORDINATES: protein motif:HMM:NF014575.2
GO:0006364 - rRNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006886461.1
COORDINATES: similar to AA sequence:RefSeq:WP_004796847.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016724.2
GO:0019812 - type I site-specific deoxyribonuclease complex [Evidence IEA]
GO:0009035 - type I site-specific deoxyribonuclease activity [Evidence IEA]
GO:0009307 - DNA restriction-modification system [Evidence IEA]
HsdR family type I site-specific deoxyribonuclease
COORDINATES: protein motif:HMM:TIGR00497.1
GO:0015666 - restriction endodeoxyribonuclease activity [Evidence IEA]; GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]; GO:0009307 - DNA restriction-modification system [Evidence IEA]
type I restriction-modification system subunit M
COORDINATES: protein motif:HMM:NF023583.2
type I restriction-modification system subunit M N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF013577.2
MurR/RpiR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_004796985.1
COORDINATES: similar to AA sequence:RefSeq:WP_011206510.1
COORDINATES: similar to AA sequence:RefSeq:WP_004795755.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012730.2
COORDINATES: similar to AA sequence:RefSeq:WP_015287628.1
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_013354583.1
COORDINATES: similar to AA sequence:RefSeq:WP_004797102.1
COORDINATES: similar to AA sequence:RefSeq:WP_020862461.1
COORDINATES: protein motif:HMM:NF016443.2
DpnII family type II restriction endonuclease
COORDINATES: similar to AA sequence:RefSeq:WP_004795058.1
ABC transporter ATP-binding protein/permease
COORDINATES: similar to AA sequence:RefSeq:WP_004795060.1
COORDINATES: protein motif:HMM:NF013704.2
COORDINATES: similar to AA sequence:RefSeq:WP_004796005.1
COORDINATES: protein motif:HMM:NF014684.2
COORDINATES: similar to AA sequence:RefSeq:WP_015286993.1
COORDINATES: protein motif:HMM:NF014647.2
BMP family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_010925271.1
COORDINATES: similar to AA sequence:RefSeq:WP_005683775.1
COORDINATES: similar to AA sequence:RefSeq:WP_006608351.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004796533.1
GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006608353.1
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024991.2