Rhodoferax ferrireducens T118, complete sequence.
type: Entry
definition: Rhodoferax ferrireducens T118, complete sequence.
sequence version: NC_007908.1
sequence date: 2023-04-20
sequence: sequence
division: CON
label: NC_007908.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02598320
keyword: RefSeq
source: Rhodoferax ferrireducens T118 (Albidiferax ferrireducens T118)
organism: Rhodoferax ferrireducens T118
taxonomy: Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP000267.1.\nURL -- http://www.jgi.doe.gov\nSource DNA available from Derek Lovley (dlovley@microbio.umass.edu)\nBacteria available from DSMZ: DSM 15236\nContacts: Derek Lovley (dlovley@microbio.umass.edu)\n Paul Richardson (microbes@cuba.jgi-psf.org)\nQuality assurance done by JGI-Stanford\nAnnotation done by JGI-ORNL and JGI-PGF\nFinishing done by JGI-LANL\nFinished microbial genomes have been curated to close all gaps with\ngreater than 98% coverage of at least two independent clones. Each\nbase pair has a minimum q (quality) value of 30 and the total error\nrate is less than one per 50000.\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. It is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/20/2023 01:22:40\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,646\nCDSs (total) :: 4,592\nGenes (coding) :: 4,533\nCDSs (with protein) :: 4,533\nGenes (RNA) :: 54\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 45\nncRNAs :: 3\nPseudo Genes (total) :: 59\nCDSs (without protein) :: 59\nPseudo Genes (ambiguous residues) :: 0 of 59\nPseudo Genes (frameshifted) :: 12 of 59\nPseudo Genes (incomplete) :: 52 o…

sequence
subclass of: SO_0000340
sequence length: 4712337
topology: circular
so has quality: SO_0000988
location: 1..4712337
location: region:1-4712337:1
RO_0002162: 338969

NC_007908
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02598320
type: BioSample
SIO_000068: biosample

1
title: Complete sequence of Chromosome of Rhodoferax ferrireducens DSM 15236
author: Copeland, A.
author: Lucas, S.
author: Lapidus, A.
author: Barry, K.
author: Detter, J.C.
author: Glavina del Rio, T.
author: Hammon, N.
author: Israni, S.
author: Pitluck, S.
author: Brettin, T.
author: Bruce, D.
author: Han, C.
author: Tapia, R.
author: Gilna, P.
author: Kiss, H.
author: Schmutz, J.
author: Larimer, F.
author: Land, M.
author: Kyrpides, N.
author: Ivanova, N.
author: Richardson, P.
journal: Unpublished

2
title: Direct Submission
author: Copeland, A.
author: Lucas, S.
author: Lapidus, A.
author: Barry, K.
author: Detter, J.C.
author: Glavina del Rio, T.
author: Hammon, N.
author: Israni, S.
author: Pitluck, S.
author: Brettin, T.
author: Bruce, D.
author: Han, C.
author: Tapia, R.
author: Gilna, P.
author: Kiss, H.
author: Schmutz, J.
author: Larimer, F.
author: Land, M.
author: Kyrpides, N.
author: Ivanova, N.
author: Richardson, P.
journal: Submitted (27-FEB-2006) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4712337:1
position: 4712337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-4712337:1:source
so part of: sequence
organism: Rhodoferax ferrireducens T118
mol type: genomic DNA
strain: DSM 15236
type material: type strain of Rhodoferax ferrireducens

338969
type: Taxonomy
SIO_000068: taxonomy

RFER_RS00005
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: dnaA
locus tag: RFER_RS00005
old locus tag: Rfer_0001
so part of: sequence
location: 7..1419
location: region:7-1419:1
so has part: feature:7-1419:1:exon
subclass of: SO_0000010

position:7:1
position: 7
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1419:1
position: 1419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7-1419:1:exon

RFER_RS00005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: dnaA
locus tag: RFER_RS00005
old locus tag: Rfer_0001
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011807219.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO process: GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chromosomal replication initiator protein DnaA
translation: MTEGQYANHPDFKGTGDGQSLWQTCVDQLAQELPEQQFNTWIKPLSAQVTDDLAQITIFVANRFKLDWIRAQYSKRITSLLEMFSGQTIHLELALAPREIFVRSQLTHRSMEPIPMDGVAELGEDRNPSSLKNRLNTALTFDTLIEGTANRMARAAAMHVAGMPGHLYNPLFIYGGVGLGKTHLMHAVGNRLLADQPNAKVLYIHAEQFVSDVVKAYQRKTFDEFKERYHSLDLLLIDDVQFFANKERTQEEFFNAFEALLAKKSHIVMTSDTYPKGLTDIHERLVSRFDSGLTVAIEPPELEMRVAILINKARVEGIVMPEEVAFFVAKNVRSNVRELEGALRKILAYSRFNQKDISILLAREALRDLLSIQNRQISVENIQKTVADYYKIKIADMYSKKRPASIARPRQIAMYLAKELTQKSLPEIGELFGGRDHTTVLHAVRKIGGERQQMTELNQQLHVLEQTLKG
SIO_010081: RFER_RS00005
subclass of: SO_0000673
so part of: RFER_RS00005
location: 7..1419
location: region:7-1419:1
so has part: feature:7-1419:1:exon

WP_011462336.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7-1419:1:exon

RFER_RS00010
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: dnaN
locus tag: RFER_RS00010
old locus tag: Rfer_0002
so part of: sequence
location: 1515..2618
location: region:1515-2618:1
so has part: feature:1515-2618:1:exon
subclass of: SO_0000010

position:1515:1
position: 1515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2618:1
position: 2618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1515-2618:1:exon

RFER_RS00010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: dnaN
locus tag: RFER_RS00010
old locus tag: Rfer_0002
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019700677.1
GO component: GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit beta
translation: MIVLKATQDKVLSVLQSVAGIVERRHTLPILANVLIRKTGTSLQLTTSDLEIQIRTTAELDGDTGDFTTVGARKLIDILRTMPADQTVSLESSAAKLILKGGKSRFTLQTMAAEDFPLVQEAASFGPVFSVPQKTLKDLLSQVSFAMAVHDIRYYLNGILFVAEGSQLSLVATDGHRLAFASATLDVEVPKQEVILPRKTVIELQRLLSDTQGAIEMQFANNQAKFSFDGMEFVTKLVEGKFPDYNRVIPKNHQNSITLGRSALLATLQRTAILTSEKFKGVRLNIDPGTLRVASNNAEQEEAVDELDIDYGGDSIEIGFNVTYLIDALANMSQDMVRLELSDGNSSALFTIPDNATFKYVVMPMRI
SIO_010081: RFER_RS00010
subclass of: SO_0000673
so part of: RFER_RS00010
location: 1515..2618
location: region:1515-2618:1
so has part: feature:1515-2618:1:exon

WP_011462337.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1515-2618:1:exon

RFER_RS00015
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: gyrB
locus tag: RFER_RS00015
old locus tag: Rfer_0003
so part of: sequence
location: 2723..5335
location: region:2723-5335:1
so has part: feature:2723-5335:1:exon
subclass of: SO_0000010

position:2723:1
position: 2723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5335:1
position: 5335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2723-5335:1:exon

RFER_RS00015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: gyrB
locus tag: RFER_RS00015
old locus tag: Rfer_0003
EC number: 5.6.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015011830.1
GO component: GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO function: GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA topoisomerase (ATP-hydrolyzing) subunit B
translation: MTEENKPVQPPENEVNGEDAVHTGEGASDSSNFQPTIDAHQIGASEAYGEGSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVVDNSIDESLAGHCDDILVTIHSDNSVSVVDNGRGIPTGVKMDDKHEPKRSAAEIALTELHAGGKFNQNSYKVSGGLHGVGVSCVNALSKMLRLTIRRDGKVHVMEFSRGFVQNRVTEVVNGVEVSPMKVIGTTEKRGTEVHFLPDSEIFQQNSDFHYEILSKRLRELSFLNNGVRIRLKDERSGKEDDFSGAGGVRGFVNFINKGKTVLNPNIFHALGDRQSDQDTNIGVEVAMQWNSGYNEQVLCFTNNIPQRDGGTHLTGLRAAMTRVINKYIDDSELAKKAKVEVTGDDMREGLTCVLSVKVPEPKFSSQTKDKLVSSEVRGPVEDIVSKLLYDYLQERPADAKIIVGKIIEAARAREAARKARDMTRRKGVLDGMGLPGKLADCQEKDPALCEIYIVEGDSAGGSAKQGRDRKFQAILPLRGKILNVEKARYEKLLTSNEILTLITALGTGIGNAGGSTGSDDFNVAKLRYHRIIIMTDADVDGAHICTLLLTFFYRQMPELVERGHIYIAQPPLYKVKAGKEELYLKDGDELDRFLLRIALVNASVFTGGENGTTLKGETLAELARKHQTTQAVIARLRNFLDAEALRSVADGVALNLDTVADAEISAAALQARLPDAEVAGEFDVASDKPILRISRRHHGNIKSSVLTQDFVHGADYAVLADAASTFKDLLSPGAIVMRGEGERQKEEKVSDFRQAMTWLLAQAEHATSRQRYKGLGEMNPAQLWETTMDPTVRRLLRVQIDDAIETDRVFTMLMGDEVEPRREFIEANALRAGNIDV
SIO_010081: RFER_RS00015
subclass of: SO_0000673
so part of: RFER_RS00015
location: 2723..5335
location: region:2723-5335:1
so has part: feature:2723-5335:1:exon

WP_011462338.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2723-5335:1:exon

RFER_RS00020
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00020
old locus tag: Rfer_0004
so part of: sequence
location: complement(5397..5825)
location: region:5397-5825:-1
so has part: feature:5397-5825:-1:exon
subclass of: SO_0000010

position:5397:-1
position: 5397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5825:-1
position: 5825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5397-5825:-1:exon

RFER_RS00020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00020
old locus tag: Rfer_0004
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007833856.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CBS domain-containing protein
translation: MKPVLELLKNRNSTVFQVSPSVTVFEALKLLANYGVGALTVMENGKLAGIVSERDYTRKVALMGKNSKETTVADIMTRDVITVTPNTGTHACMALMSQKKIRHLPVLDGAEVVGLISIRDLMDDIIADQEQTISQLTSYINS
SIO_010081: RFER_RS00020
subclass of: SO_0000673
so part of: RFER_RS00020
location: complement(5397..5825)
location: region:5397-5825:-1
so has part: feature:5397-5825:-1:exon

WP_011462339.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5397-5825:-1:exon

RFER_RS00025
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00025
old locus tag: Rfer_0005
so part of: sequence
location: 6309..7871
location: region:6309-7871:1
so has part: feature:6309-7871:1:exon
subclass of: SO_0000010

position:6309:1
position: 6309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7871:1
position: 7871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6309-7871:1:exon

RFER_RS00025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00025
old locus tag: Rfer_0005
EC number: 2.7.7.65
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019700522.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GGDEF domain-containing protein
translation: MIAKKPFEIARETLRQLTARKLAPTPINYQAIYNEVAGVATDPPFPTDRLRDIAQALPTKTPGQQKQRALLDSAIGQLNWDGVKSALMAYGGFSPPAADPATATPSTGLPMPGASAPGDVSAPALTFDFLQQMARLIEFTLPALGSDDARFNEQTQTLLKAMRQPGADVVALKLMLGSFSDRLSFAAEDQAEIKVTLLKLLHLIIENIGELSLDDRWLKGQIEALMTASTPPLTLRRLDDVERRLKDVIFKQTEAKGRALEAQEEMRQMLATFIERLSQMTESTSAYRGKLDDNARLIEQARTLAEIAPVLKEVVGATRTMAHDSLTARDELRGMREKAQSTEAELVKLHQELDRVSSQARHDPLTGALNRKGLEEAVNREVSNVRRKETPLCVALLDIDNFKKLNDALGHASGDVALAHLATVTREVMRPHDTLARYGGEEFVILMPDTALDNGIEAMTRLQRELTTRFFLAGTEKVLITFSAGVAQLATDETGQSAIKRADQAMYLAKRAGKNRVLGA
SIO_010081: RFER_RS00025
subclass of: SO_0000673
so part of: RFER_RS00025
location: 6309..7871
location: region:6309-7871:1
so has part: feature:6309-7871:1:exon

WP_011462340.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6309-7871:1:exon

RFER_RS00030
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00030
old locus tag: Rfer_0006
so part of: sequence
location: 7888..8466
location: region:7888-8466:1
so has part: feature:7888-8466:1:exon
subclass of: SO_0000010

position:7888:1
position: 7888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8466:1
position: 8466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7888-8466:1:exon

RFER_RS00030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00030
old locus tag: Rfer_0006
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011480985.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NnrU family protein
translation: MTYLILGLIVFLGVHSVRIVADDWRTQTRARIGPLAWKGLYSVLSLLGFALIVWGFGLARQQPVQLWSPPVALRHLASLLTLLSFVLLAAAYVPGNIIKERIHHPMVLGVKLWALAHLLANGNLGHVVLFGSFLAWAIVDFTASRRRDRTLGTRYPGGTAGATGITVALGVGAWIAFALWLHGLLIGVRPLG
SIO_010081: RFER_RS00030
subclass of: SO_0000673
so part of: RFER_RS00030
location: 7888..8466
location: region:7888-8466:1
so has part: feature:7888-8466:1:exon

WP_011462341.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7888-8466:1:exon

RFER_RS00035
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00035
old locus tag: Rfer_0007
so part of: sequence
location: 8487..11159
location: region:8487-11159:1
so has part: feature:8487-11159:1:exon
subclass of: SO_0000010

position:8487:1
position: 8487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11159:1
position: 11159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8487-11159:1:exon

RFER_RS00035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00035
old locus tag: Rfer_0007
EC number: 2.3.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009552488.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase
translation: MSIRNLDSLFAPASIAVFGASLRVGSVGATVWHNLSSGHYQGALYAVNPKHHKLGNHPVVAKASDLPEVPALAVICTPPASVPGLIETLGRLGTRAAVVMTAGMNDQQKQAMLDAAGAHLLRILGPNCIGLLAPHQGLNASFSHIDAQPGEVAFVSQSGALVTAMLDWAQGRGIGFSYFVSLGEHADVDFGDMLDYLASDAKTRAILLYAESIESPRKFMSAARAAARNKPVIVVKAGRSALGQLAAASHTGALAGSDMVFEAAIARAGMLRVNTLQELFLAAETLSRFRTNTSETITILTNGGGAGVMAADAAAFAEVELTQLSGSTRQKLDAVLPANWSHGNPVDIIGDAPVSRYEQALQVLKDDPGSGAVLFIHAPTAIVPSADIARALVPLAQHQPGMPPRLMSCWLGDKAVQQARQLFQDADIASFDTPEQAISAFSMLQRYRRNQAELMEAPPALLAELRPDTATIRALVLDALASGREMLTEPEAKAVLDACHIPVVPTRRIRATAAAAVKAALTIGFPVVLKILSDDISHKSDVGGVALNLQDENDVRAAARTMLARVKRQQPNARIQGFTVQAMVRRPHAQELIVGSTIDPVFGPVILFGQGGTAVEVTADRAIALPPLNEPLARALVSRTRVARLLAGWRDTPAVDEAALHRVLVAVSQLLAEIPEIAELDINPLIVNFEGAMALDARIRLSAAAPAGASNFAIRPYPAQLEETVQWQGRDLFLRPIRPEDEALHMAFLQQLDPEDVRMRVFYTRRNIERSELARLVQIDYAREMAFVAQATGPDGQLQTLGVARAMADPDNVDAEFGVIVRSDLKGTGLGRLLMEKLVAYLRAQGTQRLVATVLDYNERMLKLARDMGFQEDPTSKNGEGTKGIFLPLT
SIO_010081: RFER_RS00035
subclass of: SO_0000673
so part of: RFER_RS00035
location: 8487..11159
location: region:8487-11159:1
so has part: feature:8487-11159:1:exon

WP_011462342.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8487-11159:1:exon

RFER_RS00040
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00040
old locus tag: Rfer_0008
so part of: sequence
location: complement(11152..11364)
location: region:11152-11364:-1
so has part: feature:11152-11364:-1:exon
subclass of: SO_0000010

position:11152:-1
position: 11152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11364:-1
position: 11364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11152-11364:-1:exon

RFER_RS00040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00040
old locus tag: Rfer_0008
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011800465.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2788 domain-containing protein
translation: MFGYSEEQIAAFGLSFGVGGFMLYMLFIIGHLAWESKAGKFGTFVIFLGLAFGMTGFVAKYLIQWAIGIK
SIO_010081: RFER_RS00040
subclass of: SO_0000673
so part of: RFER_RS00040
location: complement(11152..11364)
location: region:11152-11364:-1
so has part: feature:11152-11364:-1:exon

WP_011462343.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11152-11364:-1:exon

RFER_RS00045
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00045
old locus tag: Rfer_0009
so part of: sequence
location: complement(11364..12215)
location: region:11364-12215:-1
so has part: feature:11364-12215:-1:exon
subclass of: SO_0000010

position:12215:-1
position: 12215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11364-12215:-1:exon

RFER_RS00045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00045
old locus tag: Rfer_0009
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019575241.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2189 domain-containing protein
translation: MHLSTLPAASPVSAMPAVRCIPLTRPLHWLRLAWRDLVRCGWTSLAHGLALALAGAVIVAITYNRFWLLAGAISGFLVVAPVLATSLYALSRALERGETADARVVLKTWLNWQNNHFNKWGNDYWCLVQFGALLALAGTGWVLTSAALITLLAPLPINNPVDFVQHVMLADRGFLFELWLVLGGVLAGPIFASTVITIPLLLDRRLGLLQAVLTSWRAVLANPLPMAFWGALIMALTLLGMATALMGLVLVMPLLGHASWHAYRDLVDASGLPPRDAPDQEAS
SIO_010081: RFER_RS00045
subclass of: SO_0000673
so part of: RFER_RS00045
location: complement(11364..12215)
location: region:11364-12215:-1
so has part: feature:11364-12215:-1:exon

WP_011462344.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11364-12215:-1:exon

RFER_RS00050
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00050
old locus tag: Rfer_0010
so part of: sequence
location: 12308..12673
location: region:12308-12673:1
so has part: feature:12308-12673:1:exon
subclass of: SO_0000010

position:12308:1
position: 12308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12673:1
position: 12673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12308-12673:1:exon

RFER_RS00050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00050
old locus tag: Rfer_0010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009856018.1
GO function: GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutaredoxin domain-containing protein
translation: MPRPILAESNIHPAIREKIATHEQGIVREVQAAVAKHAVVVVGMGLNPFPKKARKALDAAGVAHHYLEYGNYFSNWRQRNALKLWTGWPTLPMVFVKGVLVGGADDLIKLIDNGELTKLLA
SIO_010081: RFER_RS00050
subclass of: SO_0000673
so part of: RFER_RS00050
location: 12308..12673
location: region:12308-12673:1
so has part: feature:12308-12673:1:exon

WP_011462345.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12308-12673:1:exon

RFER_RS00055
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00055
old locus tag: Rfer_0011
so part of: sequence
location: complement(12743..13288)
location: region:12743-13288:-1
so has part: feature:12743-13288:-1:exon
subclass of: SO_0000010

position:12743:-1
position: 12743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13288:-1
position: 13288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12743-13288:-1:exon

RFER_RS00055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00055
old locus tag: Rfer_0011
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019653644.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Spy/CpxP family protein refolding chaperone
translation: MKSFFKPVLIASLLATAGFAAFSQVPAAGQDCMMGQGAMYGGMHHERMGKFDPAKMQARMDQRSAALKAQLKLTPAQETAWTTFTAAMKPPAAMMANRPDYAELIKLPTPERIDKMKALHTQRMADMTAAMEQRGEATKAFYAVLTPEQQKVFDAGTARHFGSVGRKGGHMGHMGVPAPKQ
SIO_010081: RFER_RS00055
subclass of: SO_0000673
so part of: RFER_RS00055
location: complement(12743..13288)
location: region:12743-13288:-1
so has part: feature:12743-13288:-1:exon

WP_011462346.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12743-13288:-1:exon

RFER_RS00060
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00060
old locus tag: Rfer_0012
so part of: sequence
location: 13475..14371
location: region:13475-14371:1
so has part: feature:13475-14371:1:exon
subclass of: SO_0000010

position:13475:1
position: 13475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14371:1
position: 14371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13475-14371:1:exon

RFER_RS00060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00060
old locus tag: Rfer_0012
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007836799.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombination-associated protein RdgC
translation: MFKNIIVYRIGAGWSATVAQMEEGLEADRFVECGASQEKSVGWVEPRGEAHGLLVEAVGGQLILKLMVESRALPGSVVTRKVKERVAQIEASTGRKPGKKEIRDLKDDIRLELLPMAFTKQAAVLIWIDPQARWLVIDASSQARADEVVTLLVKSLTGLAVTLLNTQVSPTAAMSEWLISQEPPAGFTVDRECELKAADESKAVVRYARHPLDNEEVKQHVVGGKLPTRLALTWDSRVSFVLTEGLQLKKLTFLEVVFEGAAAGKDDGFDADTAIATGELRKLLPDLLQALGGEVALA
SIO_010081: RFER_RS00060
subclass of: SO_0000673
so part of: RFER_RS00060
location: 13475..14371
location: region:13475-14371:1
so has part: feature:13475-14371:1:exon

WP_041791116.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13475-14371:1:exon

RFER_RS00065
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00065
old locus tag: Rfer_0013
so part of: sequence
location: complement(14571..15326)
location: region:14571-15326:-1
so has part: feature:14571-15326:-1:exon
subclass of: SO_0000010

position:14571:-1
position: 14571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15326:-1
position: 15326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14571-15326:-1:exon

RFER_RS00065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00065
old locus tag: Rfer_0013
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020206045.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GntR family transcriptional regulator
translation: MREPLYAQIARELAQGIASGKFPEGSLLSSEFDLCNQYQASRQTVRAALRELMDLGLVSRRKGVGTRVEARTKAQGYDHSLGSLDDLVQLAMTNPRVVKRTNEVVADRELAKAIGCAPGSRWLHIASIRQDSDKSAPPVCWTDTYVNTAYSDLSQLVRQDPTPLISELIEKHYGRRSAEVHQTISAVTISPLLAEELQVEPGSPALRIVRRYIDRVGETIETTISVHPAERYTFSMVLKRSSIGQDANLTT
SIO_010081: RFER_RS00065
subclass of: SO_0000673
so part of: RFER_RS00065
location: complement(14571..15326)
location: region:14571-15326:-1
so has part: feature:14571-15326:-1:exon

WP_011462348.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14571-15326:-1:exon

RFER_RS00070
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00070
old locus tag: Rfer_0014
so part of: sequence
location: 15516..16868
location: region:15516-16868:1
so has part: feature:15516-16868:1:exon
subclass of: SO_0000010

position:15516:1
position: 15516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16868:1
position: 16868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15516-16868:1:exon

RFER_RS00070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00070
old locus tag: Rfer_0014
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006158167.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: adenylosuccinate lyase family protein
translation: MASTVFDSILFRDAFGTPAMRAVFDDNELIRKYVQVEIALAKAEARCGVIPVAAAEEIAACCNGDTLDFDLLRHETEIVGYPILPLVHQISKQAGESGGYVHWGATTQDIMDTAVVLQLRDAFDLVEADIKTLRHTLAGLAKRYRDTPMAGRTHLQQALPITFGYKVAIWLDMFDRHAERVAQARPRIMVGEFAGAAGTLASLGDKGLAVQKAMMEELGLGVPVSTWHVARDGFAEAVNLLGLITGSLGKIAYDVMIMASNEFGELYEPFVKGRGASSTMPQKRNPISSELMLACAKGVRQNAGLMLDAMVQDLERATGPWHAEWIAIPEAFILAAGALNQAKFMLGGLIVDEKAMLKNLGMTNGLIVAEAVMMGLAPHIGRQDAHDVVYDACRVVNEQGGRLADALNAIPSVASRLQPELIERLTDPANYLGSASQMVDQVLASSARLG
SIO_010081: RFER_RS00070
subclass of: SO_0000673
so part of: RFER_RS00070
location: 15516..16868
location: region:15516-16868:1
so has part: feature:15516-16868:1:exon

WP_011462349.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15516-16868:1:exon

RFER_RS00075
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00075
old locus tag: Rfer_0015
so part of: sequence
location: 16906..18333
location: region:16906-18333:1
so has part: feature:16906-18333:1:exon
subclass of: SO_0000010

position:16906:1
position: 16906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18333:1
position: 18333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16906-18333:1:exon

RFER_RS00075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00075
old locus tag: Rfer_0015
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016474814.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0008509 - monoatomic anion transmembrane transporter activity [Evidence IEA]
GO process: GO:0006820 - monoatomic anion transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DASS family sodium-coupled anion symporter
translation: MSSNGTTSNRKQVIAAAVPIILGLAIWFTPAPQGLSLQAWHMFAIFAATIAGILTQPLPSGAVMLIAICVTIFTKTLTEAKALSGFASGTVWLIFCAYILSLGFVTSGLGKRIAYKMLSKFGGSSLGIAYSLGVSDLIMAPAMPSVTARSGGIIFPIVRSINEVLGSGPGPSGKKIGDFLTMVCFQFTPITGAMFLTGMAANPLVGNLAKSALGVEVTWVGWFTAAVVPGLVCFFLMPLLVYKILNPDLKRTPEAKEMGRRSLSELGPMTRTEKKVAFGFALALIGWGTSLMTGLGATTVGLGLAAYLFATNAVSWKDLLKDHAAWDTVIWFGAIISLAGGLSDLGFIKWMTGALGSSLTGMGAMETFVILGLLYIYVHYLFATASGHVAALYAPFAATAIAAGAPPMMVAICFGIFSNLMWGNTEYGGGPGPIYFAQGYFERPRFYTINFFVVTFNVILTFMVGGVWWKVLGYY
SIO_010081: RFER_RS00075
subclass of: SO_0000673
so part of: RFER_RS00075
location: 16906..18333
location: region:16906-18333:1
so has part: feature:16906-18333:1:exon

WP_011462350.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16906-18333:1:exon

RFER_RS00080
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00080
old locus tag: Rfer_0016
so part of: sequence
location: 18731..19351
location: region:18731-19351:1
so has part: feature:18731-19351:1:exon
subclass of: SO_0000010

position:18731:1
position: 18731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19351:1
position: 19351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18731-19351:1:exon

RFER_RS00080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00080
old locus tag: Rfer_0016
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011799597.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TetR/AcrR family transcriptional regulator
translation: MLIDQSGAKHHILDCGERLVASKGFVGVGLAEILSVAGVPKGSFYHYFGSKERFGEELLVRYLGQYLSRLDTLLQADGTPARARLMRYWSYWNITQCGTAADGCSEPQAGAKCLIVKLSAEVADISETMRLTLRDGTDRVVQRIAQCLEEARFDGSVPPTLVADATALTLYELWLGASLLAKLRRDGSPFEHALRSTELLLGSPRI
SIO_010081: RFER_RS00080
subclass of: SO_0000673
so part of: RFER_RS00080
location: 18731..19351
location: region:18731-19351:1
so has part: feature:18731-19351:1:exon

WP_011462351.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18731-19351:1:exon

RFER_RS00085
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00085
old locus tag: Rfer_0017
so part of: sequence
location: 19454..20614
location: region:19454-20614:1
so has part: feature:19454-20614:1:exon
subclass of: SO_0000010

position:19454:1
position: 19454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20614:1
position: 20614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19454-20614:1:exon

RFER_RS00085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00085
old locus tag: Rfer_0017
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004198074.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: iron-containing alcohol dehydrogenase
translation: MLNFDFYNPTQIVFGKDRIADLAKLVPAEARVLILVGGASAEKTGTLAEVRQALGTRQHETFSGIEPNPGFDTSMQAVQKVREGGFDFLLAVGGGSVIDAAKFIAAAVPFEGDAWDILLQGGRNIKAALPFGAVLTLPATGSEMNNGSVITRRDIGAKLPFRSRLLFPQFSVLDPTKTYTLPPQQLANGVVDAFVHTVEQYLTYPVNAPLQDRFAESLLQTLVDIGPRLLAAPEPDYDDRASLMWAATLALNGLIGAGVPQDWATHMMGHELTALHNIDHARTLAIVLPAMLNERRVQKRAKLLQYGERVWGIRSGNDEERITAAIDQTRDFFERMGIPTRLGAYGLGTEAIDAVIRQLEAHGMTQLGEHRDVTPAVSRRVLEAAL
SIO_010081: RFER_RS00085
subclass of: SO_0000673
so part of: RFER_RS00085
location: 19454..20614
location: region:19454-20614:1
so has part: feature:19454-20614:1:exon

WP_011462352.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19454-20614:1:exon

RFER_RS00090
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00090
old locus tag: Rfer_0018
so part of: sequence
location: 20653..21687
location: region:20653-21687:1
so has part: feature:20653-21687:1:exon
subclass of: SO_0000010

position:20653:1
position: 20653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21687:1
position: 21687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20653-21687:1:exon

RFER_RS00090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00090
old locus tag: Rfer_0018
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016835911.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADP-dependent oxidoreductase
translation: MTQTTTLNRQVQLAARPVGTPTAADFHLATTAVPVAGPGQLLLRTVYLSLDPYMRGRMSDAASYAASVAIGATMVGATVCRVQSSQHAGFAVGDWVLAYTGWQDYALSDGTGLTKLDPGLARPSYALGVLGMPGFTAYMGLLDIGAPKAGETVVVAAATGAVGSVVGQIAKLKGCRVVGIAGGADKCRSAVQELGFDACIDHHNPDLAALLAAACPKGIDVYFENVGGKVFDAVLPLLNTAARVPVCGLIAQYNATALPEGPDRSPLLMRTLLTKRIRMQGFIIFDDYGHRYPEFAKDMSQWLANGQIKFREDIVNGLENAPQAFIGLLEGKNFGKLIVRVAND
SIO_010081: RFER_RS00090
subclass of: SO_0000673
so part of: RFER_RS00090
location: 20653..21687
location: region:20653-21687:1
so has part: feature:20653-21687:1:exon

WP_011462353.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20653-21687:1:exon

RFER_RS00095
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00095
old locus tag: Rfer_0019
so part of: sequence
location: 21742..22434
location: region:21742-22434:1
so has part: feature:21742-22434:1:exon
subclass of: SO_0000010

position:21742:1
position: 21742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22434:1
position: 22434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21742-22434:1:exon

RFER_RS00095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00095
old locus tag: Rfer_0019
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008903116.1
GO function: GO:0019172 - glyoxalase III activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type 1 glutamine amidotransferase domain-containing protein
translation: MKKILMVLTSHSQLGHTGAKTGFWLEEFAAPYYVFKDAGAAITLASPLGGQPPLDPKSDEAASQTDATRRFKADPAAQALLASTHPLRELSAADFDAVFYPGGHGPLWDLAENYYSIALIEATLAAGKPVAAVCHASAALRHPKAADGLPVVHGKSVTGFTNTEEAAVGLTQVVPFLVEDMLKANGGRYSKGADWQAFVVTDGLLITGQNPASSEPAAKALLEKLSQVSS
SIO_010081: RFER_RS00095
subclass of: SO_0000673
so part of: RFER_RS00095
location: 21742..22434
location: region:21742-22434:1
so has part: feature:21742-22434:1:exon

WP_011462354.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21742-22434:1:exon

RFER_RS00100
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00100
old locus tag: Rfer_0020
so part of: sequence
location: 22508..23584
location: region:22508-23584:1
so has part: feature:22508-23584:1:exon
subclass of: SO_0000010

position:22508:1
position: 22508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23584:1
position: 23584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22508-23584:1:exon

RFER_RS00100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00100
old locus tag: Rfer_0020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012249626.1
GO function: GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO process: GO:1905887 - autoinducer AI-2 transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AI-2E family transporter
translation: MNPSDNPVSASFKNQALLPLMVAVSIALGWILLPFYGTIMWGAIIALLFTPVYRRLLARLKWRRTPAALLTLLLVLLLLVLPFALLTAALAREAAQVYQQLQSGELNPSLYFQGLFDALPDWLTALLDSFGLVNFAALQRRLIAALAQGSQFLATQAMGIGQITFEFVTSLFITLYLAFFLIRDGDSVARALRHAVPLAPEHKKELIGKFTTVIRATVKGNLLVAVIQGALGGIAFWFLGVGGALLWAVLMAFLSLLPAVGAGLVWLPVAIYFFLTGATWQGIALCAWGVLVIGLIDNLLRPILVGKDTRMPDYVVMITTLGGMVVFGINGFVIGPAIAAMFMAVWEIYVTTRIDPAP
SIO_010081: RFER_RS00100
subclass of: SO_0000673
so part of: RFER_RS00100
location: 22508..23584
location: region:22508-23584:1
so has part: feature:22508-23584:1:exon

WP_011462355.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22508-23584:1:exon

RFER_RS00105
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00105
old locus tag: Rfer_0021
so part of: sequence
location: complement(23634..23831)
location: region:23634-23831:-1
so has part: feature:23634-23831:-1:exon
subclass of: SO_0000010

position:23634:-1
position: 23634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23831:-1
position: 23831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23634-23831:-1:exon

RFER_RS00105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00105
old locus tag: Rfer_0021
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018912689.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2892 domain-containing protein
translation: MKTNEGGIDRILRIVAGLVLMGLTLTGTIGAWGWIGVVPLATGLIGWCPLYTLLGINSCPMKSNS
SIO_010081: RFER_RS00105
subclass of: SO_0000673
so part of: RFER_RS00105
location: complement(23634..23831)
location: region:23634-23831:-1
so has part: feature:23634-23831:-1:exon

WP_011462356.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23634-23831:-1:exon

RFER_RS00110
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00110
old locus tag: Rfer_0022
so part of: sequence
location: complement(23927..24616)
location: region:23927-24616:-1
so has part: feature:23927-24616:-1:exon
subclass of: SO_0000010

position:23927:-1
position: 23927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24616:-1
position: 24616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23927-24616:-1:exon

RFER_RS00110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00110
old locus tag: Rfer_0022
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014426290.1
GO function: GO:0030552 - cAMP binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Crp/Fnr family transcriptional regulator
translation: MLCQPQARAAANVMMATALRPTELYPALAQVQPSLAELGPGAAPMSVPAGTVLFSENTPCQGFPLVLGGEIKVSRSSGDGRALELYRVVAGELCLVSSSCLFRSQPLSAHGITTQASTLMLIAPDIFRRWLETPAFRNEVLGLFAERMADLTSLIDAVAFHKLDRRLAAALLGHGQQRKVTHQMLADELGTVREIVTRLLRRFEREGWVTLGREQIQIVDGAALRALGN
SIO_010081: RFER_RS00110
subclass of: SO_0000673
so part of: RFER_RS00110
location: complement(23927..24616)
location: region:23927-24616:-1
so has part: feature:23927-24616:-1:exon

WP_011462357.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23927-24616:-1:exon

RFER_RS00115
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: cueR
locus tag: RFER_RS00115
so part of: sequence
location: complement(24678..25133)
location: region:24678-25133:-1
so has part: feature:24678-25133:-1:exon
subclass of: SO_0000010

position:24678:-1
position: 24678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25133:-1
position: 25133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24678-25133:-1:exon

RFER_RS00115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: cueR
locus tag: RFER_RS00115
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013592557.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006878 - cellular copper ion homeostasis [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Cu(I)-responsive transcriptional regulator
translation: MKMTLPAPMEAATLEGTLWPVAIGVAARLSNVSAKMVRHYESLGLLAPVTRTDSGYRQYNAADVRTLQFIKRGRDLGFSMAEIAELVSLWRNRQRASASVKRIAQKHVNELAHRIEAMQAMQRTLTALLDHCQGDERPDCPILDDLAGTCC
SIO_010081: RFER_RS00115
subclass of: SO_0000673
so part of: RFER_RS00115
location: complement(24678..25133)
location: region:24678-25133:-1
so has part: feature:24678-25133:-1:exon

WP_244095771.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24678-25133:-1:exon

RFER_RS00120
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00120
so part of: sequence
location: complement(25130..25327)
location: region:25130-25327:-1
so has part: feature:25130-25327:-1:exon
subclass of: SO_0000010

position:25130:-1
position: 25130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25327:-1
position: 25327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25130-25327:-1:exon

RFER_RS00120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005799410.1
GO function: GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heavy-metal-associated domain-containing protein
translation: MKQTFTVTGMTCGHCEKAVTRAVKQADPQAEVSIDRAANKVDVQSEQPRELLAQAIAEEGYTVAA
SIO_010081: RFER_RS00120
subclass of: SO_0000673
so part of: RFER_RS00120
location: complement(25130..25327)
location: region:25130-25327:-1
so has part: feature:25130-25327:-1:exon

WP_041789950.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25130-25327:-1:exon

RFER_RS00125
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00125
old locus tag: Rfer_0024
so part of: sequence
location: 25444..27717
location: region:25444-27717:1
so has part: feature:25444-27717:1:exon
subclass of: SO_0000010

position:25444:1
position: 25444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27717:1
position: 27717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25444-27717:1:exon

RFER_RS00125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00125
old locus tag: Rfer_0024
EC number: 7.2.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006299064.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0019829 - ATPase-coupled monoatomic cation transmembrane transporter activity [Evidence IEA]
GO process: GO:0006812 - monoatomic cation transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heavy metal translocating P-type ATPase
translation: MNTAAAPAISPGSLDIGIGGMTCASCVGRVERALKKVPGVQSVAVNLATESARIAYAPTEQMEARLRRAVRDAGYEPLAADATIDAPDASPWAGFMPVAIGLALSAPLVLPMLGNLAGWHWMLPAWLQFALATPVQFILGARFYKAGWHALKNLAGNMDLLVALGTTAGWLLSMWLWLNAAPGVMAHLYFEGSAVVITMVLLGKWLEARAKRQTTSAIRALHGLRPATAHLISIDGEVDVPVAEVLVGDRLVVKPGERLPVDGLLQEGQTQVDESMLTGEPLPIVKDPGAALTGGSINGDGRIVMQVKAVGSETVLAHIIRLVEDAQAAKAPIQRLVDQVSAVFVPVVLGIALITLLGWWLSGHPFEVAVINAVTVLVIACPCALGLATPAAIMAGTGVAAKYGILIKDAQALELAHKVDVVVFDKTGTLTVGQPRLTAFQAVAGGDEVTLLAAAASLQSGSEHPLARAVVAVASERGLAIHPPITVRAVPGRGTEGELRATDGNEAAQPSYLIGSLRWMDELGVDWRALAAPAATLQGSGATVSLLARRWVATAAQAERIEILALLAFADEPKPGAQAAVAALRARSIKTVMISGDNQGAARAMARRLGFRPESDEVRAEVLPGDKAAQVLALKNGGHTVAMVGDGVNDAPALTAADVGMAMANAGGGGSDVAMHAAGITLMRGDPGLVAAALDISDRTVAKIRQNLFWAFAYNVAGIPLAALGFLNPVVAGAAMAMSSVSVMSNALLLKRWKPRK
SIO_010081: RFER_RS00125
subclass of: SO_0000673
so part of: RFER_RS00125
location: 25444..27717
location: region:25444-27717:1
so has part: feature:25444-27717:1:exon

WP_011462359.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25444-27717:1:exon

RFER_RS00130
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00130
old locus tag: Rfer_0025
so part of: sequence
location: complement(27784..28506)
location: region:27784-28506:-1
so has part: feature:27784-28506:-1:exon
subclass of: SO_0000010

position:27784:-1
position: 27784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28506:-1
position: 28506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27784-28506:-1:exon

RFER_RS00130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00130
old locus tag: Rfer_0025
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: nucleotidyl transferase AbiEii/AbiGii toxin family protein
translation: MTRPLNPNDPNVVMLELVARRLGADLCSRFAFVGGSIAGLLITDPANPPIRSTEDVDIVAEVLALSGYHGIEKALRERGFTQDMSADAPICRWQVEGVTVDVMPTLEEILGFANRWYPLCVSTAESLELPSGVAIRVVQAPVFIGTKLEAFHGRGGGDYLFSHDLGDIISVVDGRDSLLGECEQMPEELRGYLAEQFSALLADRRFLDALPGHLPGDVMNQSRLPDLEAKIQQLATLSKI
SIO_010081: RFER_RS00130
subclass of: SO_0000673
so part of: RFER_RS00130
location: complement(27784..28506)
location: region:27784-28506:-1
so has part: feature:27784-28506:-1:exon

WP_011462360.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27784-28506:-1:exon

RFER_RS00135
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00135
old locus tag: Rfer_0026
so part of: sequence
location: complement(28503..29048)
location: region:28503-29048:-1
so has part: feature:28503-29048:-1:exon
subclass of: SO_0000010

position:28503:-1
position: 28503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29048:-1
position: 29048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28503-29048:-1:exon

RFER_RS00135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00135
old locus tag: Rfer_0026
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYRSKSNPQIVLRPQDVVVLLRLSLQRGPAPTYAALAEELKLTASEIHAGVERAMAAQLLRKDAAGKPAVLLEPLRLFVLHGVRYCFPATRGEMTRGVPTSYAAPPMLALIVQPNEAPPVWPHKAGTVRGAAFYPLYPTVPDAALANPALYELLVLVDAIRGGSLRERALAIAELDKRWSA
SIO_010081: RFER_RS00135
subclass of: SO_0000673
so part of: RFER_RS00135
location: complement(28503..29048)
location: region:28503-29048:-1
so has part: feature:28503-29048:-1:exon

WP_011462361.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28503-29048:-1:exon

RFER_RS00140
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00140
old locus tag: Rfer_0027
so part of: sequence
location: complement(29130..29516)
location: region:29130-29516:-1
so has part: feature:29130-29516:-1:exon
subclass of: SO_0000010

position:29130:-1
position: 29130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29516:-1
position: 29516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29130-29516:-1:exon

RFER_RS00140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00140
old locus tag: Rfer_0027
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006496937.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-binding protein
translation: MKSLPPSPNPWPRLAPSALEAVIHSQNCHAAFVLSGIGSLSTAGLRFAGADQPERLTGDIQILSLSGTVAFDGVKSSSHLHMALSTSTGQVPGGYIPAGCIVRTTAEVLVLLLEWAFSREPDALTGFE
SIO_010081: RFER_RS00140
subclass of: SO_0000673
so part of: RFER_RS00140
location: complement(29130..29516)
location: region:29130-29516:-1
so has part: feature:29130-29516:-1:exon

WP_011462362.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29130-29516:-1:exon

RFER_RS00145
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00145
old locus tag: Rfer_0028
so part of: sequence
location: complement(29673..32813)
location: region:29673-32813:-1
so has part: feature:29673-32813:-1:exon
subclass of: SO_0000010

position:29673:-1
position: 29673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32813:-1
position: 32813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29673-32813:-1:exon

RFER_RS00145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00145
old locus tag: Rfer_0028
EC number: 3.1.21.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019573278.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0009035 - type I site-specific deoxyribonuclease activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I restriction endonuclease subunit R
translation: MVESDLEQLALTWFQDTGWDYRAGPDIAPDSDSPQRSDYRQMLLQGELREALSRLNPQVPAAVLDDVAHQLSKPDHPSLIQSNRAFHEALVGGVPVEVEVNGERRGDRVVLVDFDTPERNRFLVVNQFTVQGSKQPRRPDLVCFINGLPIAVIELKNLAAEQVGVQDAFHQLQTYKDELADLFVTNEALVASDGLHARIGSLTASFERFLPWRTVKNENDRPLLEFELEKVVRGFFAPALLLDYLRYFVLFEMADGQVVKKIAAYHQFHAVRAAVKAAVIAATPPATNAAQEQWASYAERVKPGSRMGGIVWHTQGSGKSISMVCFAAKLMQQPEMHNPTLVVVTDRNDLDGQLFQTFVGARSLLREQPQQAGSRDELRALLAGRPSGGIIFTTVQKFTPDAGEEVFPLLSERNNIVVMADEAHRSQYGFRAVLDKKTGKYKYGFAKHLRDALKNATFVGFTGTPIEAGDHDTRAVFGEYVSIYDIQDAVDDGATVPIFYESRLAKLNLNQVEMEKLNADVEDVFEDEEDAALIEAEKTRWAALEKLVGAKERVDLVAADIVQHFEARNTAVAGKGMVVAMSREICARLYAAIIKLRPDWHSDDPAQGAIKVVMTGSAADATLLQPHIYNSAAKKLLERRFKDATDPLKLVIVRDMWLTGFDVPCLHTMYIDKPMRDHNLMQAIARVNRVFRDKEGGLVVDYIGIAAELRKALRTYTESKGKGQPTLDATEALAKLQELMEVARHLLHGFDFSAYRTQATTLLLPAANFVLGLDDGKKRWADVVLAITKAFSLCGTLDDAALLREEIAFFQAIKAVIAKATTSDAKLSEEGRNAVLKQILDNAVVAEGVEDIFKLAGLERPDIGILSDAFLEEVRQLPQRNFAVELLQKLLNDQVKSRMRTNVVMERKFSERLQAALNRYLSRAVESAQVIEELIAMAKEFREAALRGNKLGLNTSELAFYDALTDNESAVREMDDEVLKKIAVEITEKLRNSTSVDWQKRESVRARLRNLVRITLRRYKYPPDMQEEAIRLVLEQAERLSDAWTK
SIO_010081: RFER_RS00145
subclass of: SO_0000673
so part of: RFER_RS00145
location: complement(29673..32813)
location: region:29673-32813:-1
so has part: feature:29673-32813:-1:exon

WP_011462363.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29673-32813:-1:exon

RFER_RS00150
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00150
old locus tag: Rfer_0029
so part of: sequence
location: complement(32826..33959)
location: region:32826-33959:-1
so has part: feature:32826-33959:-1:exon
subclass of: SO_0000010

position:32826:-1
position: 32826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33959:-1
position: 33959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32826-33959:-1:exon

RFER_RS00150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00150
old locus tag: Rfer_0029
inference: COORDINATES: protein motif:HMM:NF024685.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SIR2 family protein
translation: MSEIDQNDRRMLETAIAILTDQYQENGEFNEHIDAEEPVVIGESEYLRSSVLFWVDPEAYEVEKENWQRSESDAKHEKALELIRSNGVVGLVEDMLLAVERGRVVPFVGAGLSKPLGMPLWGDALTQLLGRLPGADAPKIQALIASGQYLEAAQELAAYDKVQTSHFVKTTYRASQLKLKAGPLQHLPRFARGCIVTTNFDDAIEKTYEGATHQGKQLVFDAYMHGTQENKFFSRLVRGDRCLLKLHGDAESEATHILTAEQYELAYGQPFDFQKSLPKALRQIYISQSLLFLGCGLEQDWTMELFKAARDSDGYQVPNHYAIVEAPVDVKVKQQKETRLLDLNIQPIWYPNGEHQMVENVIDLVADVAEKRFVFKG
SIO_010081: RFER_RS00150
subclass of: SO_0000673
so part of: RFER_RS00150
location: complement(32826..33959)
location: region:32826-33959:-1
so has part: feature:32826-33959:-1:exon

WP_011462364.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32826-33959:-1:exon

RFER_RS00155
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00155
old locus tag: Rfer_0030
so part of: sequence
location: complement(33956..35299)
location: region:33956-35299:-1
so has part: feature:33956-35299:-1:exon
subclass of: SO_0000010

position:33956:-1
position: 33956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35299:-1
position: 35299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33956-35299:-1:exon

RFER_RS00155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00155
old locus tag: Rfer_0030
EC number: 3.1.21.-
inference: COORDINATES: protein motif:HMM:NF013579.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006304 - DNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: restriction endonuclease subunit S
translation: MSEWIETTVGEIAASSRNALVGGPFGSNLVSKDYVDQGVPVIRGQNMGGRWVAGDFACVSTEKAAALSANTARPGDIVFTQRGTLGQVALVPDSPYETYVVSQSQMKLTVDPEKADSLFLYYLFSSPIQQEYIRQNSIQVGVPHTNLGILRDTPVVLPKSVDVQKDIARQLGTLDDKIELNRRMNETLEAMARAIFQSWFVDFDPVRAKASGESADSICQRLGLTPKLLALFPDSFEDSELGEIPSGWMIGSIGTLANVTGGSTPNTKEPKYWDDGVHCWATPKDLSRLSSPVLLETERKVSDDGLAQIGSGLLKPGAVLLSSRAPIGYRVINEVPVAVNQGFIAMTPNSGVSKYFLLYWAEWAHDEIVSRANGSTFLEISKANFRPIPVVRPTDALFEKFDQYVGPLYKRIVSNEQEKQLLVAQRDSLLPKLLSGEVMVAAEEEAS
SIO_010081: RFER_RS00155
subclass of: SO_0000673
so part of: RFER_RS00155
location: complement(33956..35299)
location: region:33956-35299:-1
so has part: feature:33956-35299:-1:exon

WP_011462365.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33956-35299:-1:exon

RFER_RS00160
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00160
old locus tag: Rfer_0031
so part of: sequence
location: complement(35292..36422)
location: region:35292-36422:-1
so has part: feature:35292-36422:-1:exon
subclass of: SO_0000010

position:35292:-1
position: 35292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36422:-1
position: 36422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35292-36422:-1:exon

RFER_RS00160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00160
old locus tag: Rfer_0031
inference: COORDINATES: protein motif:HMM:NF036995.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PDDEXK nuclease domain-containing protein
translation: MNTDTAFNFSSLVESIRQADTALAEQASRAVNISLTLRNWFIGYYIAEFELQGADRANYGDKLLTELAKALRGQAISNSGRRQLYGYLAFYRAYPQIVRTASALSAQVVPHPLLEQKVRTLSAPSSSIAGTDPETLIARLSYSHMEKLVELGDPLQRAFYEGEALRGNWSVRELKRQIATQYYQRTGLSTDKAAIAALAHGTAEQAKSSQIIRDPYVFEFLGLKPQEVMSEGHLEDALLDKLQTFLLELGHGFCFEARQKRLLIGGEHFFVDLVFYHRVLKCHVLIELKNDAFKHENLGQLNSYVSYYKQHHMTEGDQPPIGILLCTRKNAELVQYALADMSNQLFVSRYQVQLPGKAEMAAFLHKAVEELGGGDE
SIO_010081: RFER_RS00160
subclass of: SO_0000673
so part of: RFER_RS00160
location: complement(35292..36422)
location: region:35292-36422:-1
so has part: feature:35292-36422:-1:exon

WP_011462366.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35292-36422:-1:exon

RFER_RS00165
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00165
old locus tag: Rfer_0032
so part of: sequence
location: complement(36476..38110)
location: region:36476-38110:-1
so has part: feature:36476-38110:-1:exon
subclass of: SO_0000010

position:36476:-1
position: 36476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38110:-1
position: 38110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36476-38110:-1:exon

RFER_RS00165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00165
old locus tag: Rfer_0032
EC number: 2.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018714806.1
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent DNA methyltransferase
translation: MNDEEQQYLNNLDKQLWAAADRLRAAVNPSEYMHVVLGLVFLKYISDAFKERRLELQAAFQDPANDYYLGTDADELIAQELEARDYYTETNVFWVPALARWDFLKDNAKVAIDTVLTVKNGKTFEYKFKGIGRLLDDALEAVEKDNPKLKGVLDKSYARWRVDEALPGLIDEFSKIPFNHGALKAKDILGHIYEYFLGEFSIAAGKRGGEFYTPKSIVSVIVEMLEPFEGRVYDPCCGSGGFFVQSERFVLEHGGKIGQLSIYGQEFNPTTWRLASMNMAIRGLDFDFGKEPASTYTRPQHPDLRADFIMANPPFNMKAWKEGVKDDDPRWKYGVPPDGNANFAWMQHMIHHLAPHGSMALLLANGSMSSNTNNEGEIRKALIEADLVECMVALPGQLFTNTQIPACIWFLTRSKAERKAKRSRHGEVLFIDARQLGYMKDRVLRDFKPEDLAKVADTFHAWQRGVGYADEAGFCKAATLADIGKADYVLTPGRYVGAAAQEADAEPFEDKMARLTAALGDQFKESARLEAAIRKNLAGLGYEV
SIO_010081: RFER_RS00165
subclass of: SO_0000673
so part of: RFER_RS00165
location: complement(36476..38110)
location: region:36476-38110:-1
so has part: feature:36476-38110:-1:exon

WP_011462367.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36476-38110:-1:exon

RFER_RS23230
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS23230
old locus tag: Rfer_0033
so part of: sequence
location: complement(38073..38348)
location: region:38073-38348:-1
so has part: feature:38073-38348:-1:exon
subclass of: SO_0000010

position:38073:-1
position: 38073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38348:-1
position: 38348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38073-38348:-1:exon

RFER_RS23230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS23230
old locus tag: Rfer_0033
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSPEQKARVSIDALLQQAGWHVCHMADANIHAARGVALREFPLNTGYGFADYLLYIDDKAAGSSQIASRPRSKRQSHQKYERRRTTISQQP
SIO_010081: RFER_RS23230
subclass of: SO_0000673
so part of: RFER_RS23230
location: complement(38073..38348)
location: region:38073-38348:-1
so has part: feature:38073-38348:-1:exon

WP_011462368.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38073-38348:-1:exon

RFER_RS00175
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: minE
locus tag: RFER_RS00175
old locus tag: Rfer_0034
so part of: sequence
location: complement(38578..38838)
location: region:38578-38838:-1
so has part: feature:38578-38838:-1:exon
subclass of: SO_0000010

position:38578:-1
position: 38578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38838:-1
position: 38838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38578-38838:-1:exon

RFER_RS00175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: minE
locus tag: RFER_RS00175
old locus tag: Rfer_0034
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019429987.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cell division topological specificity factor MinE
translation: MSFFSFFVGEKKKSASVAKERLQIILAHERSGRNAAEPDYLPALQRELMAVISKYVKINLEDIKVNVERQDDLEVLEVKIELPDSR
SIO_010081: RFER_RS00175
subclass of: SO_0000673
so part of: RFER_RS00175
location: complement(38578..38838)
location: region:38578-38838:-1
so has part: feature:38578-38838:-1:exon

WP_011462369.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38578-38838:-1:exon

RFER_RS00180
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: minD
locus tag: RFER_RS00180
old locus tag: Rfer_0035
so part of: sequence
location: complement(38843..39658)
location: region:38843-39658:-1
so has part: feature:38843-39658:-1:exon
subclass of: SO_0000010

position:38843:-1
position: 38843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39658:-1
position: 39658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38843-39658:-1:exon

RFER_RS00180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: minD
locus tag: RFER_RS00180
old locus tag: Rfer_0035
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011793315.1
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO process: GO:0000918 - division septum site selection [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: septum site-determining protein MinD
translation: MAKIIVVTSGKGGVGKTTTSASFATGLALRGHKTAVIDFDVGLRNLDLIMGCERRVVYDLINVIHGEANLNQALIKDKQCDHLYVLAASQTRDKDALTQDGVEKVLSDLTAMDFEFIVCDSPAGIETGALMAMHFADEALVVTNPEVSSVRDSDRILGMLSSKTRRGMEGLEPVKEHLLITRYNPARVDQGQMLSLEDIQDILRIKLIGVIPESEAVLQASNQGVPAVHMKGSDVSEAYKDVIDRFLGEERPMRFTDAPKQGFLKRLFGGK
SIO_010081: RFER_RS00180
subclass of: SO_0000673
so part of: RFER_RS00180
location: complement(38843..39658)
location: region:38843-39658:-1
so has part: feature:38843-39658:-1:exon

WP_011462370.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38843-39658:-1:exon

RFER_RS00185
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: minC
locus tag: RFER_RS00185
old locus tag: Rfer_0036
so part of: sequence
location: complement(39734..40519)
location: region:39734-40519:-1
so has part: feature:39734-40519:-1:exon
subclass of: SO_0000010

position:39734:-1
position: 39734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40519:-1
position: 40519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39734-40519:-1:exon

RFER_RS00185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: minC
locus tag: RFER_RS00185
old locus tag: Rfer_0036
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010465259.1
GO function: GO:0004857 - enzyme inhibitor activity [Evidence IEA]
GO process: GO:0000918 - division septum site selection [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: septum site-determining protein MinC
translation: MSVSSAANPPSSVPASFEIKSAQLPLVALLLKTPDWDLLASDLLKQFGPQGESPDFFDNDPLVLDFSSLPPDSPVQDLKPLLQTLRACRLLAVAARGAGAVWMQAALALGLVEAPLDLPRVRPARAEPVRQAAAVEPVREAARKVPGPATLVIDKPLRSGQKVYARGGDLVVLAMVNQGAEVVADGNIHVYAPLRGKAMAGASGNTQARIFSLCLEPELISIAGVYRTSENPLAPDIHGKPAQVRLSNDGQDKLLFEALNT
SIO_010081: RFER_RS00185
subclass of: SO_0000673
so part of: RFER_RS00185
location: complement(39734..40519)
location: region:39734-40519:-1
so has part: feature:39734-40519:-1:exon

WP_011462371.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39734-40519:-1:exon

RFER_RS22845
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: ccmI
locus tag: RFER_RS22845
old locus tag: Rfer_0037
so part of: sequence
location: complement(41353..42753)
location: region:41353-42753:-1
so has part: feature:41353-42753:-1:exon
subclass of: SO_0000010

position:41353:-1
position: 41353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42753:-1
position: 42753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41353-42753:-1:exon

RFER_RS22845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: ccmI
locus tag: RFER_RS22845
old locus tag: Rfer_0037
inference: COORDINATES: protein motif:HMM:TIGR03142.1
GO function: GO:0051082 - unfolded protein binding [Evidence IEA]
GO process: GO:0017004 - cytochrome complex assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: c-type cytochrome biogenesis protein CcmI
translation: MTVFIAIAVLLTLLVMAWIVRPLLRPAPAAGVSSERLNASIYRDQLDTLERDLARGVISPADCEATRDELQLRLLDDTEEPAPIQHTSGTSIWTGRLTAALIVVLMPLGSAGMYWLLGTPAAIDPAASQKANEDQAMKMVNSLAARLQANPDNPQGWAMLARSYKVMGRFDEAEQAFKKAGDLVNTNPDLMVDYADLLAVRANNNIEGKSLELVNKALSIDPQHPMGLMMAGVAAYRRSDFKGAVNRWETLLTLLEPGSPDAQQVETDIADARAKAGLPAAQKVTAPPVTPAAGPGAEAGKLPPVDPAAAAAMTPEMINQMVDRLAARQKANPDDLPGWVRLAHAYKVQGRLADAEQAYAKASKLVDSDPDLLTQYADVLATRADNKIEGRPLALVNKALALNPKHPTALMMAGTAAYRRADYAQAVAHWEKVLSVLPPGSSDATQVQAEIADARAKGGLGLLAKP
SIO_010081: RFER_RS22845
subclass of: SO_0000673
so part of: RFER_RS22845
location: complement(41353..42753)
location: region:41353-42753:-1
so has part: feature:41353-42753:-1:exon

WP_011462372.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41353-42753:-1:exon

RFER_RS00195
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00195
old locus tag: Rfer_0038
so part of: sequence
location: complement(42750..43217)
location: region:42750-43217:-1
so has part: feature:42750-43217:-1:exon
subclass of: SO_0000010

position:42750:-1
position: 42750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43217:-1
position: 43217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42750-43217:-1:exon

RFER_RS00195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00195
old locus tag: Rfer_0038
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009552678.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c-type biogenesis protein CcmH
translation: MKYWLALVLALQCALSSYAGEATPLAEDPVVEQRMIAISEELRCLVCQNESLAGSRADLAQDLRRELRELIKANKTDAEIMEYMVSRYGDFVRYRPAVKPITWLLWFGPFLLLIGAIVMLVRMVRRNQRSAESPVLDAAQRKKAQSLLKDSETPS
SIO_010081: RFER_RS00195
subclass of: SO_0000673
so part of: RFER_RS00195
location: complement(42750..43217)
location: region:42750-43217:-1
so has part: feature:42750-43217:-1:exon

WP_011462373.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42750-43217:-1:exon

RFER_RS00200
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00200
old locus tag: Rfer_0039
so part of: sequence
location: complement(43214..43738)
location: region:43214-43738:-1
so has part: feature:43214-43738:-1:exon
subclass of: SO_0000010

position:43214:-1
position: 43214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43738:-1
position: 43738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43214-43738:-1:exon

RFER_RS00200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00200
old locus tag: Rfer_0039
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012358245.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DsbE family thiol:disulfide interchange protein
translation: MKKKLIPLGIFAVLVVFLAIGLTRDPHEIPSPLIGKAAPMFNAPLLQTPEQQFSAKDMLGQVWLLNTWASWCVACRQEHPILMEFAKTKTLPIVGLDYKDQNPEGLKWLARFGNPYDHAITDKDGRIGIDFGVYGVPESFLIDKAGVIRYKQIGPVTEEALRDKIVPLIRELQK
SIO_010081: RFER_RS00200
subclass of: SO_0000673
so part of: RFER_RS00200
location: complement(43214..43738)
location: region:43214-43738:-1
so has part: feature:43214-43738:-1:exon

WP_011462374.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43214-43738:-1:exon

RFER_RS00205
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00205
old locus tag: Rfer_0040
so part of: sequence
location: complement(43735..45708)
location: region:43735-45708:-1
so has part: feature:43735-45708:-1:exon
subclass of: SO_0000010

position:43735:-1
position: 43735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45708:-1
position: 45708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43735-45708:-1:exon

RFER_RS00205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00205
old locus tag: Rfer_0040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003803787.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heme lyase CcmF/NrfE family subunit
translation: MIPEIGHFSLILALFVALALGTLSVVGGQQGRADWMAMARPGAQALWLLTALSFGCLTYAFFTNDFSVSYVAQHSNTKLPDIYRIAGVWGGHEGSLLLWLMMLCTWMMAVSLFSRQLPEVMVSRVLGVLALVAVGFLLFMLITSNPFLRLSDIPADGRDLNPLLQDPGLVFHPPMLYMGYVGMSVPFAFAIAALLNGRLDAAWARWSRPWATAAWICLTIGIAMGSWWAYYELGWGGWWFWDPVENASFLPWLVGTALIHSLAVTEKRGLFRNWTIILAITAFSLSLLGTFLVRSGVLTSVHAFATDPKRGVFILLFLSVVVGGSLTLFAMRASKVRAGGAFALVSRETFLLVNNVLLTTAAAAVLLGTLYPLIVDALNLGKLSVGPPYFNSVFAPIMLPVLFFMVLGSFARWKNDSVAELTKKLRPVAILSVLLGCSAPFLAGEWSPLVALSLTLVFWIVLASIQQIYRQLKDTVNWRSTPISFWGMHVAHIGIAVFVVGVTMVKAYENEKDVRMVVGDTVEVADYTFRLTGIREVPGPNYTADQGDVEVLRGGKLLKTLHPEKRTYFSSTMPMTETAIDSNLLRDVYVSLGERLEGGDKPAWAMRVYHKPFIVWIWLGSLMMALGGGMAALDRRYRRKVTASAGAVNPKIKGVAA
SIO_010081: RFER_RS00205
subclass of: SO_0000673
so part of: RFER_RS00205
location: complement(43735..45708)
location: region:43735-45708:-1
so has part: feature:43735-45708:-1:exon

WP_011462375.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43735-45708:-1:exon

RFER_RS00210
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: ccmE
locus tag: RFER_RS00210
old locus tag: Rfer_0041
so part of: sequence
location: complement(45719..46162)
location: region:45719-46162:-1
so has part: feature:45719-46162:-1:exon
subclass of: SO_0000010

position:45719:-1
position: 45719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46162:-1
position: 46162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45719-46162:-1:exon

RFER_RS00210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: ccmE
locus tag: RFER_RS00210
old locus tag: Rfer_0041
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011462376.1
GO function: GO:0020037 - heme binding [Evidence IEA]
GO process: GO:0017004 - cytochrome complex assembly [Evidence IEA]; GO:0017003 - protein-heme linkage [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c maturation protein CcmE
translation: MKPRHKRAAIIAGGLAALGIAAYLVLNAFQSNLVFFFSPTQVFAGEAPKNRAFRIGGLVKEGTVKRDNLTVAFVVTDTAKEVPVSYTGILPDLFKEGKGVVAQGKLDENGHFTATEVLAKHDENYMPPEAKAALDQAQIQKTIKSLK
SIO_010081: RFER_RS00210
subclass of: SO_0000673
so part of: RFER_RS00210
location: complement(45719..46162)
location: region:45719-46162:-1
so has part: feature:45719-46162:-1:exon

WP_011462376.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45719-46162:-1:exon

RFER_RS00215
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: ccmD
locus tag: RFER_RS00215
old locus tag: Rfer_0042
so part of: sequence
location: complement(46159..46338)
location: region:46159-46338:-1
so has part: feature:46159-46338:-1:exon
subclass of: SO_0000010

position:46159:-1
position: 46159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46338:-1
position: 46338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46159-46338:-1:exon

RFER_RS00215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: ccmD
locus tag: RFER_RS00215
old locus tag: Rfer_0042
EC number: 7.6.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012358248.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0017004 - cytochrome complex assembly [Evidence IEA]; GO:0015886 - heme transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heme exporter protein CcmD
translation: MQWNSVSEFFAMGGYAFYVWGSFGVTAAVMGIETLVIRRQRQELLRNLRNELLSEGASS
SIO_010081: RFER_RS00215
subclass of: SO_0000673
so part of: RFER_RS00215
location: complement(46159..46338)
location: region:46159-46338:-1
so has part: feature:46159-46338:-1:exon

WP_011462377.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46159-46338:-1:exon

RFER_RS00220
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00220
old locus tag: Rfer_0043
so part of: sequence
location: complement(46325..47065)
location: region:46325-47065:-1
so has part: feature:46325-47065:-1:exon
subclass of: SO_0000010

position:46325:-1
position: 46325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47065:-1
position: 47065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46325-47065:-1:exon

RFER_RS00220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00220
old locus tag: Rfer_0043
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012358249.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heme ABC transporter permease
translation: MNTRVIHWFKFASPQNFYVLAGRMQPWFTALAIVLMAVGLWISFFVAPTDAQQGEGYRIIFVHVPASQMSMFIYLVMAAWAGFGLAFNTRLSGMMASALAPTGALFAFLSLITGSLWGKPMWGAWWVWDARLTSELILLFLYLGFLALQSSIDDPRRADKACAVLALVGVVNVPIIYFSVKWWNTLHQGASVSLTRSPTMASTMLAGMLIMVVAFWMYTIATTLARVRNIILDRERHTEWVKNAVE
SIO_010081: RFER_RS00220
subclass of: SO_0000673
so part of: RFER_RS00220
location: complement(46325..47065)
location: region:46325-47065:-1
so has part: feature:46325-47065:-1:exon

WP_011462378.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46325-47065:-1:exon

RFER_RS00225
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: ccmB
locus tag: RFER_RS00225
old locus tag: Rfer_0044
so part of: sequence
location: complement(47062..47745)
location: region:47062-47745:-1
so has part: feature:47062-47745:-1:exon
subclass of: SO_0000010

position:47062:-1
position: 47062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47745:-1
position: 47745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47062-47745:-1:exon

RFER_RS00225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: ccmB
locus tag: RFER_RS00225
old locus tag: Rfer_0044
EC number: 7.6.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003149819.1
GO function: GO:0015232 - heme transmembrane transporter activity [Evidence IEA]
GO process: GO:0015886 - heme transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heme exporter protein CcmB
translation: MKKLGLGSVLLAVLRREVSLALRQKGEVLTPLVFFVVIASLFPLGVGPESALLLRMAPGVLWVSALLAAMLSLQRLFATDYADGSLEQMALSSTPLGLLVLAKALSHFLLSGLPLVLMAPVLGLQFGLDGRALGILMLTLLLGTPTLSLIGSIGAALTLGVRGAGVLLSLLILPLYIPVLIFGAGAVEADAAGLGMGGHLSLLAALLVLSIFFAPLATTTALRISLE
SIO_010081: RFER_RS00225
subclass of: SO_0000673
so part of: RFER_RS00225
location: complement(47062..47745)
location: region:47062-47745:-1
so has part: feature:47062-47745:-1:exon

WP_011462379.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47062-47745:-1:exon

RFER_RS00230
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: ccmA
locus tag: RFER_RS00230
old locus tag: Rfer_0045
so part of: sequence
location: complement(47742..48374)
location: region:47742-48374:-1
so has part: feature:47742-48374:-1:exon
subclass of: SO_0000010

position:47742:-1
position: 47742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48374:-1
position: 48374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47742-48374:-1:exon

RFER_RS00230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: ccmA
locus tag: RFER_RS00230
old locus tag: Rfer_0045
EC number: 7.6.2.-
inference: COORDINATES: protein motif:HMM:NF010061.0
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0017004 - cytochrome complex assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c biogenesis heme-transporting ATPase CcmA
translation: MKTVPTLSFSKLGCSRGGRQLFQNIDCVLESGHWLYVAGANGVGKTSLLRMVCGLAPIESGEIFWNGTPIHAQADAYRQDLCYLGHLNALQESMTVHENLAFTAALGGMAPDMAQTQSVLAHFGVAGRDRQLVRHLSQGQKRRVALSRLALSQARLWVLDEPFVAMDEAGVRMLADLIAAHLTQGGLAVLTSHQQVDIGAIPAQLLELRA
SIO_010081: RFER_RS00230
subclass of: SO_0000673
so part of: RFER_RS00230
location: complement(47742..48374)
location: region:47742-48374:-1
so has part: feature:47742-48374:-1:exon

WP_011462380.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47742-48374:-1:exon

RFER_RS00235
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00235
old locus tag: Rfer_0046
so part of: sequence
location: 48665..49135
location: region:48665-49135:1
so has part: feature:48665-49135:1:exon
subclass of: SO_0000010

position:48665:1
position: 48665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49135:1
position: 49135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48665-49135:1:exon

RFER_RS00235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00235
old locus tag: Rfer_0046
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012348006.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKFKVLGILACATMALPALAADVTYRADVQPILKAQCDDCHGAEAPTLKEFDLAKEKYTKEKSGPRLSTYETLLQLIAYPDSGAFMRRLDDGSGSADKKPGNMYKHLGETDGQRAANLKVIKAWVGEGGWNPNRWTARGDVPAITKEQLDKLQLKY
SIO_010081: RFER_RS00235
subclass of: SO_0000673
so part of: RFER_RS00235
location: 48665..49135
location: region:48665-49135:1
so has part: feature:48665-49135:1:exon

WP_011462381.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48665-49135:1:exon

RFER_RS00240
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: gstA
locus tag: RFER_RS00240
old locus tag: Rfer_0047
so part of: sequence
location: complement(49239..49847)
location: region:49239-49847:-1
so has part: feature:49239-49847:-1:exon
subclass of: SO_0000010

position:49239:-1
position: 49239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49847:-1
position: 49847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49239-49847:-1:exon

RFER_RS00240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: gstA
locus tag: RFER_RS00240
old locus tag: Rfer_0047
EC number: 2.5.1.18
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019653612.1
GO function: GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0006749 - glutathione metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutathione transferase GstA
translation: MKLYYSPGACSLSPHIALQEAGLAFEAIRAPTKTHQLADGTDYYTINPLGYVPLLALDDGTQLREGPAIVQYIADQVPAKQLAPANGTFARYKLQEWLNFIGTELHKGFSPLFTPGMPEEAKTIAKTRLNSRLQWVDGELAKTPYLMGDTFTVADGYLFVVAGWTKHVGIDISALANLGAFMSRVGERPAVQAALRAEGLLK
SIO_010081: RFER_RS00240
subclass of: SO_0000673
so part of: RFER_RS00240
location: complement(49239..49847)
location: region:49239-49847:-1
so has part: feature:49239-49847:-1:exon

WP_011462382.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49239-49847:-1:exon

RFER_RS00245
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00245
old locus tag: Rfer_0048
so part of: sequence
location: complement(50035..51486)
location: region:50035-51486:-1
so has part: feature:50035-51486:-1:exon
subclass of: SO_0000010

position:50035:-1
position: 50035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51486:-1
position: 51486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50035-51486:-1:exon

RFER_RS00245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00245
old locus tag: Rfer_0048
EC number: 1.2.1.68
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010397098.1
GO function: GO:0050269 - coniferyl-aldehyde dehydrogenase activity [Evidence IEA]
GO process: GO:0006081 - cellular aldehyde metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: coniferyl aldehyde dehydrogenase
translation: MNTNPLYRAAPPTDLNPLDNGLEATLKLQRAAYFAHPYPSFSERKADLLQLKALIRDNRDAIVAAISADYGNRSRHETLFAEIFSVMDGVDHTLKHLKQWMKPQRRGVDWKNFFGASNRVIPQPLGIVGAIVPWNFPINLSFSGLIATFAAGNRSMVKMSENSRHLAKLLIEKCPAYFPREKLAFFDETGGVGIEFSKLKFDHLLFTGSGLTGRAVMAAAAPNLCPVTLEMGGKSPAIICDDYPLRKAAERLLFVKCFNAGQICTTVDHAYIPTAKVNEFAAMAKEIVSMRYPTLDTPDYTSMIDERSFNRVVAALEEAQERGATLVQLIPGKQWDSASRKIAPHIVLNAPPDCALRTREIFGPVLPIIAYTSMEEPIQAINAGPRPLALYPFSNDKPLVEHLLRHVISGGVSVNDGLFHVGQHDLPFGGVGDSGMGHYHGHDGFVTFSKMRPVFYQAPFSAIKFLWPPYGKFATRYLDFLTR
SIO_010081: RFER_RS00245
subclass of: SO_0000673
so part of: RFER_RS00245
location: complement(50035..51486)
location: region:50035-51486:-1
so has part: feature:50035-51486:-1:exon

WP_011462383.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50035-51486:-1:exon

RFER_RS00250
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: mnmG
locus tag: RFER_RS00250
old locus tag: Rfer_0049
so part of: sequence
location: 51689..53728
location: region:51689-53728:1
so has part: feature:51689-53728:1:exon
subclass of: SO_0000010

position:51689:1
position: 51689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53728:1
position: 53728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51689-53728:1:exon

RFER_RS00250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: mnmG
locus tag: RFER_RS00250
old locus tag: Rfer_0049
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011462384.1
GO function: GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
GO process: GO:0008033 - tRNA processing [Evidence IEA]; GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
translation: MLYPQHFDVIVVGGGHAGTEAALAAARMGCKTLLLSHNIETLGQMSCNPSIGGIGKGHLVKEVDALGGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRLLYKAAIRRRLENQPNLWLFQQAVDDLMVEGDRVVGAVTQAGIKFRAKTVVLTAGTFLDGKIHVGLNNYAAGRAGDPPAVRLSARLKELKLPQGRLKTGTPPRLDGRSIDFSKCGEQPGDGMPGGMSPVMPVFSFMGRVEQHPPQMSCWTTHTNERTHEIIRSGFDRSPMFTGKIEGVGPRYCPSVEDKINRFADKDSHQIFLEPEGLTTNEYYPNGISTSLPFDIQYALVRSMAGLENAHILRPGYAIEYDYFDPQQLKSSFETRAIGGLFFAGQINGTTGYEEAAAQGLFAGVNAALQAGAQTSWQQETWVPGRDEAYLGVLVDDLITKGVTEPYRMFTSRAEFRLQLREDNADMRLTETGRRLGLVDDARWEAFSRKREAVSRETERLRSLWVSPKNLTATESERVLGKSIEHEYSLADLLRRPDVNYANLMSLEGGKYASAELNIPVSRETPAVPLPEAVFAAVVIEQVEIVAKYAGYIDRQIEEVGRAAHYENLKLPLELDYLQVSALSFEARQKLSKHRPETLGQASRLSGITPAAISLLLVHLKKSNFKGFAAAGKVTAPSESGDVQQGVI
SIO_010081: RFER_RS00250
subclass of: SO_0000673
so part of: RFER_RS00250
location: 51689..53728
location: region:51689-53728:1
so has part: feature:51689-53728:1:exon

WP_011462384.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51689-53728:1:exon

RFER_RS00255
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: rsmG
locus tag: RFER_RS00255
old locus tag: Rfer_0050
so part of: sequence
location: 53728..54402
location: region:53728-54402:1
so has part: feature:53728-54402:1:exon
subclass of: SO_0000010

position:54402:1
position: 54402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53728-54402:1:exon

RFER_RS00255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: rsmG
locus tag: RFER_RS00255
old locus tag: Rfer_0050
EC number: 2.1.1.170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011462385.1
GO component: GO:0005575 - cellular_component [Evidence IEA]
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]
GO process: GO:0046118 - 7-methylguanosine biosynthetic process [Evidence IEA]; GO:0031167 - rRNA methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG
translation: MRELEQALRGGLADLALVLEDRQIALLLDYLALIQKWTQVYNLTAVREPAEMLTHHLLDSLAVIQPLRRQLAGLRDQTPDTDTANVRLLDVGSGAGLPGVVIAICCPEITVDCVDTVAKKVAFIRQVAATLKLANLHGLHARVESLTGPYRVICSRAFASLADFTRLSSAALAPQGLWLAMKAKDPAEEVAALPATVKVFHVEHLVVPGLGADRCIVWMRQSAV
SIO_010081: RFER_RS00255
subclass of: SO_0000673
so part of: RFER_RS00255
location: 53728..54402
location: region:53728-54402:1
so has part: feature:53728-54402:1:exon

WP_011462385.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53728-54402:1:exon

RFER_RS00260
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00260
old locus tag: Rfer_0051
so part of: sequence
location: 54656..55441
location: region:54656-55441:1
so has part: feature:54656-55441:1:exon
subclass of: SO_0000010

position:54656:1
position: 54656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55441:1
position: 55441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54656-55441:1:exon

RFER_RS00260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00260
old locus tag: Rfer_0051
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011481053.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MAKIFCVANQKGGVGKTTTTVNLAAGLAKVGQRVLMVDLDPQGNATMGSGVDKRQLELTIYDVLLEAASVAEARVKSDRLIEAGCGYDILGANRELTGAEVEMVAMERRERRLKEALTEVEKDYDFILIDCPPSLSMLTLNGLCCAHGVIVPMQCEYFALEGLTDLVNTIKQVHANLNKDLAIIGLLRVMFDPRITLQQQVSEQLKAHFADKVFNTVIPRNVRLAEAPSYGVPGVVFDPLAKGAQAYVAFAQEMVARIETL
SIO_010081: RFER_RS00260
subclass of: SO_0000673
so part of: RFER_RS00260
location: 54656..55441
location: region:54656-55441:1
so has part: feature:54656-55441:1:exon

WP_011462386.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54656-55441:1:exon

RFER_RS00265
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00265
old locus tag: Rfer_0052
so part of: sequence
location: 55517..56152
location: region:55517-56152:1
so has part: feature:55517-56152:1:exon
subclass of: SO_0000010

position:55517:1
position: 55517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56152:1
position: 56152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55517-56152:1:exon

RFER_RS00265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00265
old locus tag: Rfer_0052
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013516979.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta hydrolase
translation: MMTHDLPTPQVLLLPGWQNAGPAHWLSRWQAAHGYRRVEQHDWLRPLRGDWLMQLEEAVLRSKSAPGPGLTLVAHGLGCLLVAAWATHSRHTHLVKAALLVAPTDVEREALRALLASWSPIPWQPLPFSSMLLGSRDDPDCSFERAQAFAHAWGAEFIDGGPHGQINAESGLGDWPQGHALLQLVEGRTQGLSQVKTGESSAGLTVCAAHY
SIO_010081: RFER_RS00265
subclass of: SO_0000673
so part of: RFER_RS00265
location: 55517..56152
location: region:55517-56152:1
so has part: feature:55517-56152:1:exon

WP_011462387.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55517-56152:1:exon

RFER_RS00270
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00270
old locus tag: Rfer_0053
so part of: sequence
location: 56171..57112
location: region:56171-57112:1
so has part: feature:56171-57112:1:exon
subclass of: SO_0000010

position:56171:1
position: 56171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57112:1
position: 57112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56171-57112:1:exon

RFER_RS00270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00270
old locus tag: Rfer_0053
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005798438.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB/RepB/Spo0J family partition protein
translation: MVTKKPKGLGRGLDALLGPKVAESAALDGSVPGAGNAGLPTTLLLIDLVPGQYQPRTRMDEGALYELAESIKAQGIMQPILVRQLLDGVSQGKYEIIAGERRFRAAKLAGLDSVPVLVRDVANEDAAAMALIENIQREDLNPLEEAQGLQRLVKEFGHTHEQAAQAVGRSRSAASNLLRLLNLADPVQTMLMAGDLDMGHARALLVLDRATQITAATQISARSLSVREAERLAKKLSADFSLTSVRPKPEKSRDMKRVEEELSDLLTAAVEVRVKKRVKRAGRLEEMGELSIQFGSLDELNGLIDKLRRAATR
SIO_010081: RFER_RS00270
subclass of: SO_0000673
so part of: RFER_RS00270
location: 56171..57112
location: region:56171-57112:1
so has part: feature:56171-57112:1:exon

WP_011462388.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56171-57112:1:exon

RFER_RS00275
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00275
old locus tag: Rfer_0054
so part of: sequence
location: 57198..57941
location: region:57198-57941:1
so has part: feature:57198-57941:1:exon
subclass of: SO_0000010

position:57198:1
position: 57198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57941:1
position: 57941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57198-57941:1:exon

RFER_RS00275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00275
old locus tag: Rfer_0054
EC number: 2.1.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008904645.1
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MLVHLRWPLPALLTWGAAWASFWGLQRLGLSAWVALAVAAALGVVLSGWAASWWRRAIIGLGFPVSLALSGSASLPAWAWLLPLALLLLIYPLNAWRDAPLFPTPEHALRDLAGQAPLPAGALVLDAGCGLGAGLRALREAYPAAQLHGLEWSWPLRALCALRCPWARVRQGDIWRADWAPYTLVYLFQRPESMARAVAKARAQLKPGAWLVSLEFEASALVPQAVLSAPDGRPVWLYRMPLQARQP
SIO_010081: RFER_RS00275
subclass of: SO_0000673
so part of: RFER_RS00275
location: 57198..57941
location: region:57198-57941:1
so has part: feature:57198-57941:1:exon

WP_011462389.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57198-57941:1:exon

RFER_RS00280
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00280
old locus tag: Rfer_0055
so part of: sequence
location: 58043..58789
location: region:58043-58789:1
so has part: feature:58043-58789:1:exon
subclass of: SO_0000010

position:58043:1
position: 58043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58789:1
position: 58789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58043-58789:1:exon

RFER_RS00280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00280
old locus tag: Rfer_0055
inference: COORDINATES: protein motif:HMM:NF014069.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HD domain-containing phosphohydrolase
translation: MTRPDPSPPPAADPMYAAMAVAAFAIVTLAGTRSSDTGQHILRVQQYVQALVQRLKEHPRFAAALTESYCRVLFQSALLHDMGTIGIPDRILLKPAALTPAEYEIIKSHTTLARDAIEQAELTLGYQAPLLQTVKELAYSHHEKWDGSGYPQGLSEENIPLSARLMAIADVYDALISERVYRAGLPHDQAVGIIFQGRASHFDPDMVDVFIEIQDEFRAIALRFADTGQDMQRKMAYMANAIAEEVQL
SIO_010081: RFER_RS00280
subclass of: SO_0000673
so part of: RFER_RS00280
location: 58043..58789
location: region:58043-58789:1
so has part: feature:58043-58789:1:exon

WP_011462390.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58043-58789:1:exon

RFER_RS00285
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00285
old locus tag: Rfer_0056
so part of: sequence
location: 58963..60168
location: region:58963-60168:1
so has part: feature:58963-60168:1:exon
subclass of: SO_0000010

position:58963:1
position: 58963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60168:1
position: 60168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58963-60168:1:exon

RFER_RS00285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00285
old locus tag: Rfer_0056
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011484419.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4382 domain-containing protein
translation: MKLSRNSKLALGGVLVAGLAACGGGGGSASTDNGSLRLALTDAPACGYDAVNVTIQKVRVHQSGSASDTDSGWSEIVMNPALRVDLLKLQNGDLAELGEVTLPAGSYNQMRLVLAENSTNPTAVLANSVVLTSDPTKTELALKTPSGQQSGVKAKQFNITIAPNQLANFVIDFDACKSVVVAGNSGQYLLKPQLSVLARFISGVTGFVDTATLANGNTSVSLQQGGVVIKATAPDNFGKFMLQPVAPGNYSLVLTAPGRTTAVVTNVAVAADTVTSVNTSGTALNPAVSTSATVTGTAPVDTLVRVLQPLPSTLAGGAVTTVEIAGRFVDGATGLYTYPLVVNAPLVAPYVAAPGALVFTADLAAAGKYTLNASLTGFADKTTVLPTLASGATVTTNFTFP
SIO_010081: RFER_RS00285
subclass of: SO_0000673
so part of: RFER_RS00285
location: 58963..60168
location: region:58963-60168:1
so has part: feature:58963-60168:1:exon

WP_011462391.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58963-60168:1:exon

RFER_RS00290
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00290
old locus tag: Rfer_0057
so part of: sequence
location: 60184..60690
location: region:60184-60690:1
so has part: feature:60184-60690:1:exon
subclass of: SO_0000010

position:60184:1
position: 60184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60690:1
position: 60690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60184-60690:1:exon

RFER_RS00290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00290
old locus tag: Rfer_0057
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007866885.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVKITQVTTGRAPAFLLAGLLVTAGAMAAKPDWVAGGKPGKSGQHQQTQVQERQDSPSQGRPDRAAGHFGDDQRAVIRNYYSEQYRVGRCPPGLAKKNNGCMPPGQARKWALGQPLPRDVVVYSLPPAIVVQLGVAPAGHRYVRVASDILLIAIGTGLVVDAIQDLGR
SIO_010081: RFER_RS00290
subclass of: SO_0000673
so part of: RFER_RS00290
location: 60184..60690
location: region:60184-60690:1
so has part: feature:60184-60690:1:exon

WP_011462392.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60184-60690:1:exon

RFER_RS00295
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00295
old locus tag: Rfer_0058
so part of: sequence
location: complement(60804..61241)
location: region:60804-61241:-1
so has part: feature:60804-61241:-1:exon
subclass of: SO_0000010

position:60804:-1
position: 60804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61241:-1
position: 61241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60804-61241:-1:exon

RFER_RS00295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00295
old locus tag: Rfer_0058
inference: COORDINATES: protein motif:HMM:NF024824.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MYSTIRQRTLLGCAALITGFVIWSAQGAAPNTLIALGDQQWAAGQLELAQKTFEHAVKAEPRSVDAHMKLAGLQLSRQEFKACIETYQRAIGLDANNARAWLGLGFAYLHTGQNDLSLAALDEAIRIDPGNQEKLAPVLAKLGTP
SIO_010081: RFER_RS00295
subclass of: SO_0000673
so part of: RFER_RS00295
location: complement(60804..61241)
location: region:60804-61241:-1
so has part: feature:60804-61241:-1:exon

WP_011462393.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60804-61241:-1:exon

RFER_RS00300
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00300
old locus tag: Rfer_0059
so part of: sequence
location: complement(61322..62839)
location: region:61322-62839:-1
so has part: feature:61322-62839:-1:exon
subclass of: SO_0000010

position:61322:-1
position: 61322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62839:-1
position: 62839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61322-62839:-1:exon

RFER_RS00300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00300
old locus tag: Rfer_0059
inference: COORDINATES: protein motif:HMM:NF025890.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: multiheme c-type cytochrome
translation: MRRIGRFAAPMGWAIACLLSLSLAVPAFAVNQTAAKKVGADQMIKKSPADAAIGKKCISCHGAEDDPGIYGEWKKSSHAAKNVDCYDCHKAKQGEKAAFAHHGASIQVIVTPNTCANCHAAEVAQQQRSHHAKAGNILASLDNLLGEVIGGPAAVNAGCLQCHGSTVVLDDKGRPTPQTWPNTGIGRINPDGSLGSCSACHARHSFSSAQARTPDTCGKCHLGPDHPQLEIYNESKHGILYRAKIKEMNLDSKKWVVGADYTAAPTCATCHMSATREQKVTHDVGERISWTLRPAISTKLNMIRLSTGDEFDQPEGQPLPKVGDEVKGAKVTEILTWTQRRDKMKDVCVACHSANTVAGQYKQFDDLVELYNDKYAKPIAAVMKELEDKGYLTHQPMDAKIKWTWFEIWHHEGRRARHGAAMNGPDYTWWHGIYEVSQHTYFKWIPELKEVVRQKDGNEDFANALLDKHFKPIAGHDWFFNGMGKDAIEKVRKGYDERYGKGALK
SIO_010081: RFER_RS00300
subclass of: SO_0000673
so part of: RFER_RS00300
location: complement(61322..62839)
location: region:61322-62839:-1
so has part: feature:61322-62839:-1:exon

WP_011462394.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61322-62839:-1:exon

RFER_RS00305
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00305
old locus tag: Rfer_0060
so part of: sequence
location: complement(62970..63674)
location: region:62970-63674:-1
so has part: feature:62970-63674:-1:exon
subclass of: SO_0000010

position:62970:-1
position: 62970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63674:-1
position: 63674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62970-63674:-1:exon

RFER_RS00305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00305
old locus tag: Rfer_0060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011805155.1
GO function: GO:0030552 - cAMP binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Crp/Fnr family transcriptional regulator
translation: MNPEPFDIQRLLSALPLFSDLSQLERERIARGCRLVRLARGEMFFRVGEACEAFHVVVSGQIKLYVSSPAGQEKVIEIIGPGRSFAEALVFLGQPHIVNAQSLTDTLLVSVAKAAVLAEVERDPRFSLHMLAGISRRLHSLIHDVEGYALQSGMQRLIGYLLRDVEAAVGHGSGNVSVSVHLPASKATIASRLSLTPEYFSRVLHELETQGLIQIDKREIRILDVHRLANFESH
SIO_010081: RFER_RS00305
subclass of: SO_0000673
so part of: RFER_RS00305
location: complement(62970..63674)
location: region:62970-63674:-1
so has part: feature:62970-63674:-1:exon

WP_011462395.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62970-63674:-1:exon

RFER_RS00310
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00310
old locus tag: Rfer_0061
so part of: sequence
location: complement(63721..64143)
location: region:63721-64143:-1
so has part: feature:63721-64143:-1:exon
subclass of: SO_0000010

position:63721:-1
position: 63721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64143:-1
position: 64143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63721-64143:-1:exon

RFER_RS00310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00310
old locus tag: Rfer_0061
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019653575.1
GO function: GO:0016790 - thiolester hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hotdog fold thioesterase
translation: MLIWKRPISVAELTAISVNTAVDHLGMEFLEVGEDFIRARVPVDHRTQQPYGLLHGGVSVVLAETLGSCGAAYASPAGQLAVGLDINANHLKGVTSGWVTGTARPVHIGRTTQVWQIDLQNDAGELTCVSRITMAVLPPR
SIO_010081: RFER_RS00310
subclass of: SO_0000673
so part of: RFER_RS00310
location: complement(63721..64143)
location: region:63721-64143:-1
so has part: feature:63721-64143:-1:exon

WP_011462396.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63721-64143:-1:exon

RFER_RS00315
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00315
old locus tag: Rfer_0062
so part of: sequence
location: complement(64247..65950)
location: region:64247-65950:-1
so has part: feature:64247-65950:-1:exon
subclass of: SO_0000010

position:64247:-1
position: 64247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65950:-1
position: 65950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64247-65950:-1:exon

RFER_RS00315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00315
old locus tag: Rfer_0062
EC number: 1.-.-.-
inference: COORDINATES: protein motif:HMM:NF012656.2
GO function: GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyl-CoA dehydrogenase family protein
translation: MLLLNPRHLVRNYPDQRSREIMEKTVAFFEKTGLTKLKADFHGAVWYEDFLNFCKEEGIFASMMTPAEHGKEGEHAVWDTWRVCGFAEILGFYGLPYWYAYQVSVLGIGPIWMSKNKKAQAKAKRLLDEGGIFAFGLSEKEHGADIYSSDMIVTQLEDGSYRACGGKYYIGNANQARMVSTFGKMADTGEYIYFVADSQHPKYELVKNVVYSQNYVAEFRLHDYPLTEEDILHHGDDAWNAALNTVNVGKYNLGWASIGICTHAFYEAFDHAANRHLYKLTVTDFPHVRQLFTDAYARLVAMKLFALRAADYMKAASNEDRRYLLFNPIQKMKVTTQGEEVINLLWDVIAAKGFEKDMYFAMAAVEIRGLPKLEGTVHVNMALIIKFMANYFFAPAEYPEVPRRDEGSNDSFLFDQGPTKGLGKIKFHDYHIAYDSVDSPNLSVFKAQIETFKQMAMLAPPTPAQAKDIDFLLTVGEMFTLVVYGQLVLENARIYKIEPELLDQVFDFMVRDFSKFALQMYSKPSSTEGQMAQCLKMIRKPVTDDVRYARVWSEHVSKMQGQYKMPD
SIO_010081: RFER_RS00315
subclass of: SO_0000673
so part of: RFER_RS00315
location: complement(64247..65950)
location: region:64247-65950:-1
so has part: feature:64247-65950:-1:exon

WP_011462397.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64247-65950:-1:exon

RFER_RS00320
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00320
old locus tag: Rfer_0063
so part of: sequence
location: 66180..66437
location: region:66180-66437:1
so has part: feature:66180-66437:1:exon
subclass of: SO_0000010

position:66180:1
position: 66180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66437:1
position: 66437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66180-66437:1:exon

RFER_RS00320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00320
old locus tag: Rfer_0063
inference: COORDINATES: protein motif:HMM:NF015956.2
GO function: GO:0046914 - transition metal ion binding [Evidence IEA]
GO process: GO:0055072 - iron ion homeostasis [Evidence IEA]; GO:0006811 - monoatomic ion transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FeoA family protein
translation: MLLSQLSNGAHAVVQRVLPSSADVGAATLRRLGELGFIAGEPVQVLRRGPGGREPLAVQVGETLFALRLLEAQCIEVQAMDVCVN
SIO_010081: RFER_RS00320
subclass of: SO_0000673
so part of: RFER_RS00320
location: 66180..66437
location: region:66180-66437:1
so has part: feature:66180-66437:1:exon

WP_011462398.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66180-66437:1:exon

RFER_RS00325
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00325
old locus tag: Rfer_0064
so part of: sequence
location: 66445..68331
location: region:66445-68331:1
so has part: feature:66445-68331:1:exon
subclass of: SO_0000010

position:66445:1
position: 66445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68331:1
position: 68331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66445-68331:1:exon

RFER_RS00325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00325
old locus tag: Rfer_0064
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011794306.1
GO function: GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
GO process: GO:0006826 - iron ion transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ferrous iron transporter B
translation: MSQSLGVEPTLPIRCIALVGNPNCGKTALFNLLTGARQKVANYAGVTVERKVGLVHLHNGQTVSVVDLPGAYSLTAATPDEQVTLEVIEGRRAGEDTPDAIVAVVDATNLRMNLRLVLELKRLGRPLLVAVNMADVARAQGLKIDLARLAIELGLPVVETVAIKHNGHAQLLAQLEQHLAQPWPSAPASTASASSADLQREVRRILALVAPLAPTLGRFQYRLDAVVMHPVWGLVVLAAVLFLIFQAVFSWANWPMDAIKGAMAAVGDWILAHMASGPLRSLLVDGVVAGVGGVLVFMPQILILFFFILLLEDSGYLPRAAFLLDNLMGKVGLSGRAFIPLLSSFACAIPGIMATRTIANWKDRLATIMVAPLMTCSARLPVYALLIGAFVPERRLGGLSLRGLTLFGLYVAGVVSAMGVAWVFKRVWMKDGYQPLMLELPPYRRPSLRNLAQGLWERAHIFLRRVGGIIFALMVVLWFLSTYPAPPAGWDAAQGPAIQYSFAGMMGHALQWIFAPIGFNWQISIALVPGMAAREVVVGALGTVYALSGVDASVADALSPVIAQGWSLATAYALLAWFVFAPQCLSTLAVVRRETNSWRYPLFMAAYLFVLAYAAAFATYRITLWLGG
SIO_010081: RFER_RS00325
subclass of: SO_0000673
so part of: RFER_RS00325
location: 66445..68331
location: region:66445-68331:1
so has part: feature:66445-68331:1:exon

WP_011462399.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66445-68331:1:exon

RFER_RS00330
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00330
old locus tag: Rfer_0065
so part of: sequence
location: 68336..68626
location: region:68336-68626:1
so has part: feature:68336-68626:1:exon
subclass of: SO_0000010

position:68336:1
position: 68336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68626:1
position: 68626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68336-68626:1:exon

RFER_RS00330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00330
old locus tag: Rfer_0065
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MWLQSLLVLLLVAGSSIYAAWALLPQAARRSLAQGLLRWPLPRSLAGYLQQAARAPAGCHCSGCDRAPANVKQGNKRGPTDGLLAKPLVFHPRKRD
SIO_010081: RFER_RS00330
subclass of: SO_0000673
so part of: RFER_RS00330
location: 68336..68626
location: region:68336-68626:1
so has part: feature:68336-68626:1:exon

WP_011462400.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68336-68626:1:exon

RFER_RS00335
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00335
old locus tag: Rfer_0066
so part of: sequence
location: complement(68690..69757)
location: region:68690-69757:-1
so has part: feature:68690-69757:-1:exon
subclass of: SO_0000010

position:68690:-1
position: 68690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69757:-1
position: 69757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68690-69757:-1:exon

RFER_RS00335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00335
old locus tag: Rfer_0066
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007731521.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AbrB family transcriptional regulator
translation: MFASPFRAMTALWWSVLLLISAVLGWALTALHLPAGVLLGCMLAGIVLSSQEIRLGIPTTLFALAQGVVGCLMAKSLQPSTLAKVASDWPIFLGATFSIVAASAALGWLLMHRQVFPGTTAVWGLAPGAASAMVLMAEAYGADVRLVAFMQYLRVAVVTAVAALVAHFWTTRAAPMTPEVHWFAVINPGDLGWTLLLAFAVSSIAGWLHIPGGPMVVPLVLGAALQAMGWLVIELPPALLAVSYAVIGWSIGLRFTRAILRHALRALPAVLGSIFALMGVGLVIAVGLTQWAGHDPLTAYLASSPGGADSVAIIAATSAVDAGFVMAMQLARFLMVLVLGPRVSKFVATQSRTDR
SIO_010081: RFER_RS00335
subclass of: SO_0000673
so part of: RFER_RS00335
location: complement(68690..69757)
location: region:68690-69757:-1
so has part: feature:68690-69757:-1:exon

WP_011462401.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68690-69757:-1:exon

RFER_RS00340
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00340
old locus tag: Rfer_0067
so part of: sequence
location: 69848..70219
location: region:69848-70219:1
so has part: feature:69848-70219:1:exon
subclass of: SO_0000010

position:69848:1
position: 69848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70219:1
position: 70219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69848-70219:1:exon

RFER_RS00340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00340
old locus tag: Rfer_0067
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016452383.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioredoxin family protein
translation: MTPAALPSPAAVLVVCLCAEWCGVCRDYRQRFAQVQTQFPGVRFLWIDVEDEAELLDPLDVEDFPTLLLAVGDRPHFFGPLTPQTDTLARLVRSLIEDSSSPALADPSLTALVARLRAAHPFL
SIO_010081: RFER_RS00340
subclass of: SO_0000673
so part of: RFER_RS00340
location: 69848..70219
location: region:69848-70219:1
so has part: feature:69848-70219:1:exon

WP_011462402.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69848-70219:1:exon

RFER_RS00345
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00345
old locus tag: Rfer_0068
so part of: sequence
location: 70250..70840
location: region:70250-70840:1
so has part: feature:70250-70840:1:exon
subclass of: SO_0000010

position:70250:1
position: 70250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70840:1
position: 70840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70250-70840:1:exon

RFER_RS00345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00345
old locus tag: Rfer_0068
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008443385.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chalcone isomerase family protein
translation: MSTRNSLKQLLAIGLLALVSVLPSWAAEVGGVKIDEAVTVEGQPLKLNGAGVRTKFVFKVYAMGLYLTDHKTTPSDIQALAGPKRVTIVMLREVASDELAKTFVAGLNNNSNAAEKAKVSDQTQKFEKMFTTVPVVKKGDVITLDWLPATGTVSQLNGKPLGEALPDAAFYNAVLRIWLGEKPVDDALKSALLGAK
SIO_010081: RFER_RS00345
subclass of: SO_0000673
so part of: RFER_RS00345
location: 70250..70840
location: region:70250-70840:1
so has part: feature:70250-70840:1:exon

WP_011462403.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70250-70840:1:exon

RFER_RS00350
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00350
old locus tag: Rfer_0069
so part of: sequence
location: complement(70953..72239)
location: region:70953-72239:-1
so has part: feature:70953-72239:-1:exon
subclass of: SO_0000010

position:70953:-1
position: 70953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72239:-1
position: 72239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70953-72239:-1:exon

RFER_RS00350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00350
old locus tag: Rfer_0069
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013517011.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: solute carrier family 23 protein
translation: MPLFNWTVKSASVLQQGGVIAPDERLPWPQTAVMGMQHVIAMFGATVLAPILMGFDPNLAILMSGIGTLIFFVVTGGKVPSYLGSSFAFIGVVIAATGYAGKGLNPNIGVALGGIIACGAAYTAIGLLVQVVGTNWIEKLMPPVVTGAVVAVIGLNLASVPIKNMAASNFDSWMQAVTFVCVALVAVFTRGMVQRLLILVGLIVATAVYAVLTNGLGLGKALDVSTLLNAAWIGAPGFAAPVFEPKAMLMIVPVAIILVAENLGHLKAVSAMTGKNMDPYMGRAFIGDGIATMVSASAGGTGVTTYAENIGVMAATKIYSTALFLVAALLAVVLGFSPKFGAIIAAIPLPVMGGVSIVVFGLIAVAGARIWVQNKVDFADNKNLLVAAITLILGTGDFTLKFGGFALGGIGTATFGAIFLYALLNRKR
SIO_010081: RFER_RS00350
subclass of: SO_0000673
so part of: RFER_RS00350
location: complement(70953..72239)
location: region:70953-72239:-1
so has part: feature:70953-72239:-1:exon

WP_011462404.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70953-72239:-1:exon

RFER_RS00355
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00355
old locus tag: Rfer_0070
so part of: sequence
location: complement(72547..72756)
location: region:72547-72756:-1
so has part: feature:72547-72756:-1:exon
subclass of: SO_0000010

position:72547:-1
position: 72547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72756:-1
position: 72756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72547-72756:-1:exon

RFER_RS00355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00355
old locus tag: Rfer_0070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012433657.1
GO component: GO:0019867 - outer membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycine zipper 2TM domain-containing protein
translation: MKIIQKYSVGVLAAALVVLSGCAGMTHQEKGTAAGAVIGGVVGSASGGGVLGTAAGAAVGGVIGHEVTK
SIO_010081: RFER_RS00355
subclass of: SO_0000673
so part of: RFER_RS00355
location: complement(72547..72756)
location: region:72547-72756:-1
so has part: feature:72547-72756:-1:exon

WP_041789958.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72547-72756:-1:exon

RFER_RS00360
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00360
old locus tag: Rfer_0071
so part of: sequence
location: complement(72818..73465)
location: region:72818-73465:-1
so has part: feature:72818-73465:-1:exon
subclass of: SO_0000010

position:72818:-1
position: 72818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73465:-1
position: 73465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72818-73465:-1:exon

RFER_RS00360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00360
old locus tag: Rfer_0071
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020229928.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTPAAHAIVLAIGLALSVGAMAQGMTKVQYETARTGVSAELKLARAACDSFSAHAKDLCLAEASGKEKVATAELNARLAPSEQASYKVRLTRADAQYTLAREKCDDLAGHAKDVCVREAKAKAVTAKANAKAHMRTAVAHDAAYDKTRKAQGVADEKAAQAQAKADDISTAARTDAVKEKSTAAYTVAKEKCDALAGDAKGNCVKDATARSSKP
SIO_010081: RFER_RS00360
subclass of: SO_0000673
so part of: RFER_RS00360
location: complement(72818..73465)
location: region:72818-73465:-1
so has part: feature:72818-73465:-1:exon

WP_011462406.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72818-73465:-1:exon

RFER_RS00365
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00365
old locus tag: Rfer_0072
so part of: sequence
location: complement(73485..73958)
location: region:73485-73958:-1
so has part: feature:73485-73958:-1:exon
subclass of: SO_0000010

position:73485:-1
position: 73485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73958:-1
position: 73958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73485-73958:-1:exon

RFER_RS00365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00365
old locus tag: Rfer_0072
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011871845.1
GO component: GO:0019867 - outer membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycine zipper 2TM domain-containing protein
translation: MKTMNKAGSVLALAALLALGGCQNMTPPNTYDSGTAYPQSSSGAGAYTGYGVVQSIDLVRQGGSTGIGGAIVGGVVGGILGHQVGSGQGNTAATVLGAAGGAYAGHEIEKRNQPQADAYKFTIRMRDGSYQTVTQTSIDDIRVGDRVRIDNGVARRY
SIO_010081: RFER_RS00365
subclass of: SO_0000673
so part of: RFER_RS00365
location: complement(73485..73958)
location: region:73485-73958:-1
so has part: feature:73485-73958:-1:exon

WP_011462407.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73485-73958:-1:exon

RFER_RS00370
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00370
old locus tag: Rfer_0073
so part of: sequence
location: complement(73992..74582)
location: region:73992-74582:-1
so has part: feature:73992-74582:-1:exon
subclass of: SO_0000010

position:73992:-1
position: 73992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74582:-1
position: 74582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73992-74582:-1:exon

RFER_RS00370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00370
old locus tag: Rfer_0073
inference: COORDINATES: protein motif:HMM:NF016836.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BON domain-containing protein
translation: MRTRFELLALSTALAALTALSVGCSKAPEATGASASGASTPSTTVGTVIDDSIVTASVKAALLADPDLKGFDFKVVTRKGEVQLSGFVDKQTQIDIAVTVAGAVTGVKSVQNNVSLRSVAPTVGGKVDDTLITAKVKTALLADESIKSLDIAVITRQGDVQLSGFVNNQSQIDRAIAVVSGIAGVSHVSNEMSIKK
SIO_010081: RFER_RS00370
subclass of: SO_0000673
so part of: RFER_RS00370
location: complement(73992..74582)
location: region:73992-74582:-1
so has part: feature:73992-74582:-1:exon

WP_011462408.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73992-74582:-1:exon

RFER_RS00375
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00375
old locus tag: Rfer_0074
so part of: sequence
location: 74835..75050
location: region:74835-75050:1
so has part: feature:74835-75050:1:exon
subclass of: SO_0000010

position:74835:1
position: 74835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75050:1
position: 75050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74835-75050:1:exon

RFER_RS00375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00375
old locus tag: Rfer_0074
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011793272.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNPTKMIGIILIAAGCLGLAFGGFSYTKETTGMKLGPLELKVQEKQTVNVPLIVSAGGIILGVFLLVVGRK
SIO_010081: RFER_RS00375
subclass of: SO_0000673
so part of: RFER_RS00375
location: 74835..75050
location: region:74835-75050:1
so has part: feature:74835-75050:1:exon

WP_011462409.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74835-75050:1:exon

RFER_RS00380
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00380
old locus tag: Rfer_0075
so part of: sequence
location: 75237..76511
location: region:75237-76511:1
so has part: feature:75237-76511:1:exon
subclass of: SO_0000010

position:75237:1
position: 75237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76511:1
position: 76511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75237-76511:1:exon

RFER_RS00380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00380
old locus tag: Rfer_0075
inference: COORDINATES: protein motif:HMM:NF021427.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2130 domain-containing protein
translation: MTEPTIICPNCRTEIKLTESLAAPLLAATRQQFEAQLARKDHDIAQRESAMREKEKALTDAKRDLDEQVADQVASQLKTERSRVAAEEAKKARAAAANELEAKARELAELRGVLTVQDAKLAEAQQAQAEVIKQQRELDDAKRELDLTVEKRVQTSLSEVRTLAKREAEDGMKLRVAEKDQTIASMQQKIEELKQKAEQGSQQLQGEVQELELENLLRAKFPFDLIEPVPKGEFGGDALHRVNSQSGVLCGSILWESKRTRNWSDGWLPKLREDQRCAKAEVCVLVSQVLPKGVETFDLVDGVWITSPRVAIPVAIMLRQALLQISQTRALSDGMQTKTEMVYQYLTGPRFRQRVEAIVEAFSSMQDDLDKERKVIMKQWAKRQEQIERVMGATVGMYGDLQGIAGKSLQEIEGLELSALEMKR
SIO_010081: RFER_RS00380
subclass of: SO_0000673
so part of: RFER_RS00380
location: 75237..76511
location: region:75237-76511:1
so has part: feature:75237-76511:1:exon

WP_011462410.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75237-76511:1:exon

RFER_RS00385
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00385
old locus tag: Rfer_0076
so part of: sequence
location: complement(76523..77026)
location: region:76523-77026:-1
so has part: feature:76523-77026:-1:exon
subclass of: SO_0000010

position:76523:-1
position: 76523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77026:-1
position: 77026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76523-77026:-1:exon

RFER_RS00385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00385
old locus tag: Rfer_0076
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011485350.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CinA family protein
translation: MTQKLSKSELSTQYLCGLVADLMLRNRLKLVTAESCTGGMIAAACTDLAGSSDWFERGFVTYSNEAKTELLDVQAQLLLSEGAVSEAVARAMVRGALAHAHAQVAVAVTGVAGPTGGSPAKPVGTVWFGFAVPGQVITEKRHFDGDRAQVRAATVRHTFTRLVELLG
SIO_010081: RFER_RS00385
subclass of: SO_0000673
so part of: RFER_RS00385
location: complement(76523..77026)
location: region:76523-77026:-1
so has part: feature:76523-77026:-1:exon

WP_011462411.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76523-77026:-1:exon

RFER_RS00390
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00390
old locus tag: Rfer_0077
so part of: sequence
location: complement(77023..77604)
location: region:77023-77604:-1
so has part: feature:77023-77604:-1:exon
subclass of: SO_0000010

position:77023:-1
position: 77023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77604:-1
position: 77604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77023-77604:-1:exon

RFER_RS00390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00390
old locus tag: Rfer_0077
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005799867.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphatidylglycerophosphatase A
translation: MPVDEPFFDPPIAARPITPEPVLPSARFLYTHPAHLMALGFGSGLSPLAPGTAGTLWAWLTFVLLQPGMNDARWALLIALSLPLGWWACSVTAKHMRVLDPSSIVWDEIAAFWLVLWLVTPAGFWGQLVAFGLFRFFDAAKPGPVRWADQLFHGVNVTSDPAAWRKAGFGIMLDDLVAAACALLVIAGWRYFQ
SIO_010081: RFER_RS00390
subclass of: SO_0000673
so part of: RFER_RS00390
location: complement(77023..77604)
location: region:77023-77604:-1
so has part: feature:77023-77604:-1:exon

WP_011462412.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77023-77604:-1:exon

RFER_RS00395
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: cls
locus tag: RFER_RS00395
old locus tag: Rfer_0078
so part of: sequence
location: complement(77643..79031)
location: region:77643-79031:-1
so has part: feature:77643-79031:-1:exon
subclass of: SO_0000010

position:77643:-1
position: 77643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79031:-1
position: 79031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77643-79031:-1:exon

RFER_RS00395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: cls
locus tag: RFER_RS00395
old locus tag: Rfer_0078
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006413584.1
GO function: GO:0008808 - cardiolipin synthase activity [Evidence IEA]
GO process: GO:0032049 - cardiolipin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cardiolipin synthase
translation: MTLHTLLRSAATAVGALAFAACATLPDTDELIQRHAGQAARFETARGALPAQKSAAILAQLKSQSGDIDILDKQIALEQAVNDSPLVLGNKVTLLQDGAATYPAMFAAIRSARDHINLESYIIENDEVGRQFSDLLLAQQARGVQVNVIYDSVGALNTPKAFFERLKQGGIEVLEFNPINPLTAKGPWMINHRDHRKLLLVDGRIAFIGGINISSVYGSGSIPSRSHKAAANTDEWRDTDLQIEGPVVSEFQKLFLQTWEKQRGRPLATKNYFPALKVQGKDIVRTIGSTPDDPFSLMYLTLISAIGNAEKQVHLTQAYFVPDPQLLQALVAAAGRGVDVKLILPSHSDSGLVFHAGRAHYTELLQGGVKLYERVGGLLHAKTAVIDGVWSTVGSSNLDWRSFLDNNEIDAVVLGQEFAQKMEAMFASDLQASQAIDLQGWQHRPLQFRIKEWLARVWERLL
SIO_010081: RFER_RS00395
subclass of: SO_0000673
so part of: RFER_RS00395
location: complement(77643..79031)
location: region:77643-79031:-1
so has part: feature:77643-79031:-1:exon

WP_011462413.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77643-79031:-1:exon

RFER_RS00400
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00400
old locus tag: Rfer_0079
so part of: sequence
location: complement(79028..81010)
location: region:79028-81010:-1
so has part: feature:79028-81010:-1:exon
subclass of: SO_0000010

position:79028:-1
position: 79028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81010:-1
position: 81010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79028-81010:-1:exon

RFER_RS00400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00400
old locus tag: Rfer_0079
inference: COORDINATES: protein motif:HMM:NF017021.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AsmA family protein
translation: MTLPRSLKWIAGAVIAPVVLALLFIAIFGWNWLRAPIERMALEKTGRVLAINGDLRVTLGWPRPRLRANAVTFANPLWTQEKQMLAADAVEITLDLSQLLGRKLVFPELRLERPVVFLEQGTEGRKSWLLDQQQQDPGARIQIDRLTLDQGTLGYDDAVQKTSIRAELASLTPPAGSTADTGLTFSAHGRYKGQALTAQGNGGPVLALRDESTPYPLTIDASVGHTRVRAEGSVTSLLKFTAVDLALALSGDNLAQLYPLLGITFPATRSYVTAGHLLHSGNSWRYEKFSGRIGTSDIAGSLQVKTGGQRPALTAELTSSVLDLADLGPLIGSRPGSVQAAKQAARQLPTEPPQTAAVTPAQARVLPDQSFNTERWRSVDAEVSLRAKALKREKELPLEDLVAHLSLQDGLLTLDPLNFGLAGGQLNSVVTLDGRTDPITAHAKVRARKILLAKLFPTAELNQASIGQINGEFDLAGQGNSVGRMLAGSNGKVGLVVSGGEISKLMMEKAGLHLWEILQLSLSGDRLIKLRCAVADFEVKNGKMQTDALVLDTQVTTLLGSGNVDLAQERLDLTFNQKTKATSPLALRSPIYVRGSFAKPELGVDKTRVAVRALGALALGVVNPFLTLLPLIDAGPGQDSDCGQLVRDARALPHPKSQKK
SIO_010081: RFER_RS00400
subclass of: SO_0000673
so part of: RFER_RS00400
location: complement(79028..81010)
location: region:79028-81010:-1
so has part: feature:79028-81010:-1:exon

WP_166485615.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79028-81010:-1:exon

RFER_RS00405
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00405
old locus tag: Rfer_0080
so part of: sequence
location: complement(81242..81565)
location: region:81242-81565:-1
so has part: feature:81242-81565:-1:exon
subclass of: SO_0000010

position:81242:-1
position: 81242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81565:-1
position: 81565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81242-81565:-1:exon

RFER_RS00405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00405
old locus tag: Rfer_0080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019572499.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKYSNLLLATAASLALAGCFSLPAGPAGPQGATGATGDTGYTGATGRTGGTGATGATGYTGATGGAGATGDTGATGYTGATGSTGATGRTGATGSVPAGTVVIVPAQ
SIO_010081: RFER_RS00405
subclass of: SO_0000673
so part of: RFER_RS00405
location: complement(81242..81565)
location: region:81242-81565:-1
so has part: feature:81242-81565:-1:exon

WP_011462415.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81242-81565:-1:exon

RFER_RS00410
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00410
old locus tag: Rfer_0081
so part of: sequence
location: 81897..82316
location: region:81897-82316:1
so has part: feature:81897-82316:1:exon
subclass of: SO_0000010

position:81897:1
position: 81897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82316:1
position: 82316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81897-82316:1:exon

RFER_RS00410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00410
old locus tag: Rfer_0081
inference: COORDINATES: protein motif:HMM:NF024189.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YXWGXW repeat-containing protein
translation: MKPSNKVRHLVLSVLVAASAVAVPAFAQVSVNINLAPPAPLYEVRPVIAPGYAWAPGYWVLMGDRHVWVRGRTIVQREGYRWAPDHWEQRNNIYVRQPGYWQRDDNYKSIKMEKQKKPKHWDKGQGQGGKHGNKGKRND
SIO_010081: RFER_RS00410
subclass of: SO_0000673
so part of: RFER_RS00410
location: 81897..82316
location: region:81897-82316:1
so has part: feature:81897-82316:1:exon

WP_011462416.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81897-82316:1:exon

RFER_RS00415
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00415
old locus tag: Rfer_0082
so part of: sequence
location: complement(82418..83161)
location: region:82418-83161:-1
so has part: feature:82418-83161:-1:exon
subclass of: SO_0000010

position:82418:-1
position: 82418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83161:-1
position: 83161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82418-83161:-1:exon

RFER_RS00415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00415
old locus tag: Rfer_0082
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011802353.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: general secretion pathway protein GspB
translation: MSYILDALKRADTERERGNVPGLHTRQLATPTGPTVPGARSSLWLAVAAAVALGGIGVGLWLWLTPADTPRPVVLKPVVVQPPVNAPAPVAAVAPKSTPAPTATPAATATLPPTVAAPPTQVAALPVMPTTVKPRPEPTRAAPAVATPAPPKAEVKPGPIPPAAAPATAALTAVPLLSDLPEDLRRQVPALTITGAVYSENPAQRLLLVNNLVLAQGALAAPEVKLEEIQARSSVFSFRGTRFRVAH
SIO_010081: RFER_RS00415
subclass of: SO_0000673
so part of: RFER_RS00415
location: complement(82418..83161)
location: region:82418-83161:-1
so has part: feature:82418-83161:-1:exon

WP_011462417.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82418-83161:-1:exon

RFER_RS00420
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00420
old locus tag: Rfer_0083
pseudo: true
so part of: sequence
location: complement(83166..84864)
location: region:83166-84864:-1
so has part: feature:83166-84864:-1:exon
subclass of: SO_0000010

position:83166:-1
position: 83166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84864:-1
position: 84864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83166-84864:-1:exon

RFER_RS00420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00420
old locus tag: Rfer_0083
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017878777.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: AAA family ATPase
SIO_010081: RFER_RS00420
subclass of: SO_0000673
so part of: RFER_RS00420
location: complement(83166..84864)
location: region:83166-84864:-1
so has part: feature:83166-84864:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:83166-84864:-1:exon

RFER_RS00425
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00425
old locus tag: Rfer_0084
so part of: sequence
location: 84980..85756
location: region:84980-85756:1
so has part: feature:84980-85756:1:exon
subclass of: SO_0000010

position:84980:1
position: 84980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85756:1
position: 85756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84980-85756:1:exon

RFER_RS00425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00425
old locus tag: Rfer_0084
EC number: 1.18.1.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013517177.1
GO function: GO:0004324 - ferredoxin-NADP+ reductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ferredoxin--NADP reductase
translation: MSAFLEETVLSVHHWTDRLFSFTTTRDPTLRFSNGHFTMIGLRLETGKPLLRAYSIVSANYEDHLEFLSIKVQDGPLTSRLQHIKVGDKIVVGRKPTGTLLIDYLLSGKNLYLIGTGTGLAPFLSIVRDPETYERFEKVILVHGVREVAELAYHDYLTYELPEHEFLGDMVTQQLLYYPTVTREAFVHQGRVTTLLESGQLQTDLGLSKFDPAHDRVMLCGSPDMLRDLKHLLEKRDFMEGNTTKQGDFVIERAFVEQ
SIO_010081: RFER_RS00425
subclass of: SO_0000673
so part of: RFER_RS00425
location: 84980..85756
location: region:84980-85756:1
so has part: feature:84980-85756:1:exon

WP_011462418.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84980-85756:1:exon

RFER_RS00430
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00430
old locus tag: Rfer_0085
so part of: sequence
location: 85846..86664
location: region:85846-86664:1
so has part: feature:85846-86664:1:exon
subclass of: SO_0000010

position:85846:1
position: 85846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86664:1
position: 86664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85846-86664:1:exon

RFER_RS00430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00430
old locus tag: Rfer_0085
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019573858.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotidyltransferase family protein
translation: MLLAAGRGERMRPLTDTTPKPLLPVRGKPLMQWQLEALARAGVGRVVVNTAWLGPQIAAQFNDVFRLQPASNKHEQLSIQDSLQIRYSHEGQDFGAALETAGGIARALPLLCPPTGAGARAEVFWVLAGDVYVPDFVFSPAAVARFLAGDKLAHLWLVPNPAHNLRGDFGLGTVDTGGPTPVGLALNLPAADPRPRYTYSTIGLYRRALFESPWCDIAAGNPLGIKAPLAPLLRAAMDNGFVSAELYGGRWTDVGTPERLRALNLNPPSAQP
SIO_010081: RFER_RS00430
subclass of: SO_0000673
so part of: RFER_RS00430
location: 85846..86664
location: region:85846-86664:1
so has part: feature:85846-86664:1:exon

WP_011462419.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:85846-86664:1:exon

RFER_RS00435
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00435
old locus tag: Rfer_0086
so part of: sequence
location: 86684..88093
location: region:86684-88093:1
so has part: feature:86684-88093:1:exon
subclass of: SO_0000010

position:86684:1
position: 86684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88093:1
position: 88093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86684-88093:1:exon

RFER_RS00435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00435
old locus tag: Rfer_0086
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019653739.1
GO function: GO:0030145 - manganese ion binding [Evidence IEA]; GO:0070006 - metalloaminopeptidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminopeptidase P N-terminal domain-containing protein
translation: MTATPLAKTADTGYAQRRAQVAKLIGPHGIAIIPTAPEQQRNRDNDFLFRPDSYFYYLTGFTEPKAWLVITGDGKTSLFCQAKDQEREIWDGYRLGPQAAPAALGVDAAFAVADLDAQLPGLLDGRDAVWYPFATHKGLETRIDGWLGSVRARVRYGTLCPEQQRDLCGLLDEMRLVKDAHEQATMRRAAQISAGAHIRAMQLSARMLRGGQEVREYHLDAELLHEFRRHGSQSPAYGSIVAAGANACVLHYRADAGQVRAGELVLIDAACELDGYASDITRTFPANGKFSGPQRALYELVLAAQEAAVAATRAGARFTDPHEASVKVLAQGMLDLGLLERNKVGSLEDVIDKRAYFQFYMHRTGHWIGMDVHDCGAYTEPSEIGQVSTRKDALTGDLIKDRPARILQPGMVLTIEPGIYVRPAAGVPAQFHNIGIRIEDDAIVTASGCELISRGVPVQADDIEALMRG
SIO_010081: RFER_RS00435
subclass of: SO_0000673
so part of: RFER_RS00435
location: 86684..88093
location: region:86684-88093:1
so has part: feature:86684-88093:1:exon

WP_011462420.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:86684-88093:1:exon

RFER_RS00440
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00440
old locus tag: Rfer_0087
so part of: sequence
location: 88135..88647
location: region:88135-88647:1
so has part: feature:88135-88647:1:exon
subclass of: SO_0000010

position:88135:1
position: 88135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88647:1
position: 88647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88135-88647:1:exon

RFER_RS00440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00440
old locus tag: Rfer_0087
inference: COORDINATES: protein motif:HMM:NF020123.2
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TlpA disulfide reductase family protein
translation: MKTVFSLILLCLVATTNLAAAKTPGEVEVGSVLREATMLGLSGPSRQLSQYRGKPLIINVWASWCGPCQQEMGSLERLARSKTGQQVTLIGISTDDYPEAARAFLKRYPTSFSHYIDQQLLLENMLGAAQLPLTLLVDAQGRVLAKHVGAQQWDSPQALQFIGKTLRLKP
SIO_010081: RFER_RS00440
subclass of: SO_0000673
so part of: RFER_RS00440
location: 88135..88647
location: region:88135-88647:1
so has part: feature:88135-88647:1:exon

WP_011462421.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88135-88647:1:exon

RFER_RS00445
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: ppdK
locus tag: RFER_RS00445
old locus tag: Rfer_0088
so part of: sequence
location: complement(88705..91500)
location: region:88705-91500:-1
so has part: feature:88705-91500:-1:exon
subclass of: SO_0000010

position:88705:-1
position: 88705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91500:-1
position: 91500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88705-91500:-1:exon

RFER_RS00445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: ppdK
locus tag: RFER_RS00445
old locus tag: Rfer_0088
EC number: 2.7.9.1
inference: COORDINATES: protein motif:HMM:TIGR01828.1
GO function: GO:0050242 - pyruvate, phosphate dikinase activity [Evidence IEA]
GO process: GO:0015976 - carbon utilization [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyruvate, phosphate dikinase
translation: MTSSKKYVYAFEEGDGKNKMLLGGKGANLCEMTQIGLNVPPGFTASTDACNAYLEKNQLPPGLMDEIRTHMAALEKKTGKGFGDAKNPLLISVRSGAAMSMPGMMDTILNLGLNEVSLKGLITQTGNERFAYDAYRRFIQLFGKIALNISDEHFDERMVAIKRKYGAPQDVDLNTEHLKELAGEFLAIVQRQTGQAFPQDPFVQLEIAVGAVFRSWMGKRAVDYRKQFRITKAQANGTAVSICTMVFGNMGNDSGTGVGFTRNPGTGENVIYGEYLVNAQGEDVVAGIRTPKAIAEMEQEMPEIHRQLIQLRSRLESHYHEVQDFEFTIEKGILYCLQTRNGKMNARAMVRTSVEMFHQGLITKERALLRTEPAVLEQLLVPQLAPNFHAKSLAQGLSASPGAASGKIVFDADTAETRGRAGEKIILVREETKPEDIHGFFQAQGILTSRGGKTSHAAVVARGMGKPCVSGCEQIVINDQLRSAKVGDTVLREGDVITIDGGTGHVYAGEIPTVEAEFSEEMNTLLGWADEVAALKVMANADSPVDALRAREFGAMGIGLCRTERMFNATDRLPIVQEMILAETLEERQAALDRLLPIQRADFKGIFKAMKGLPVTVRLLDPPMHEFLPTAAQLELEIAHLHQLRDTIKALEDLPETLKMLNPKLYQQYADGLTPLMGALGTFKKSHMEDEVIAKKEKILKKVRALAEVNPMLGHRGVRLGITYPEIYSMQIRAILEAAALCGKQGIEIYPEIMVPQVATVEELKRIHSYVQRIRQEVRATHGIDVQFKFGSMLEVVRACMRSGRMAEIAEFFSFGTNDLSQATFSFSREDAENKFLPFYNETGILEDNPFEVLDIKGVGQLMKMAVQNGRVTNPDLKVGICGEHGGHPGSIRFCHHIKLNYVSCSGPRVPIARLAAAQAKLLEDQYREPV
SIO_010081: RFER_RS00445
subclass of: SO_0000673
so part of: RFER_RS00445
location: complement(88705..91500)
location: region:88705-91500:-1
so has part: feature:88705-91500:-1:exon

WP_011462422.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88705-91500:-1:exon

RFER_RS00450
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: pip
locus tag: RFER_RS00450
old locus tag: Rfer_0089
so part of: sequence
location: complement(91596..92561)
location: region:91596-92561:-1
so has part: feature:91596-92561:-1:exon
subclass of: SO_0000010

position:91596:-1
position: 91596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92561:-1
position: 92561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91596-92561:-1:exon

RFER_RS00450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: pip
locus tag: RFER_RS00450
old locus tag: Rfer_0089
EC number: 3.4.11.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017878044.1
GO function: GO:0004177 - aminopeptidase activity [Evidence IEA]
GO process: GO:0030163 - protein catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: prolyl aminopeptidase
translation: MSADALNPLYPAIAPYRTGQLPVDDIHTLYWEECGNPDGVPALFLHGGPGAGLSPQHRQFFDPAYYRIVLFDQRGAGQSTPLGEALENTTDLLIHDIERLREQLGIAQWLVFGGSWGSTLALAYGEAHPERCTGFVLRGIFLCTRSEIDWFLNGIRLFFPQEHARFVADIPETERGNLLQAYARRLFSGNPAENMRAARTWSRYEGSCLHLLPHPEVAETFGSAAVGLGLGRLEAHYFLHDAFLSEDQLVRNVDRIRHLPAVIIQGRYDVVCPPVSAWRLHEAWPEASFQMIEDAGHAAFEPGIASALIAATNQFKRDGTL
SIO_010081: RFER_RS00450
subclass of: SO_0000673
so part of: RFER_RS00450
location: complement(91596..92561)
location: region:91596-92561:-1
so has part: feature:91596-92561:-1:exon

WP_041791146.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91596-92561:-1:exon

RFER_RS00455
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00455
old locus tag: Rfer_0090
so part of: sequence
location: 92806..93288
location: region:92806-93288:1
so has part: feature:92806-93288:1:exon
subclass of: SO_0000010

position:92806:1
position: 92806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93288:1
position: 93288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92806-93288:1:exon

RFER_RS00455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00455
old locus tag: Rfer_0090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011485715.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rubrerythrin family protein
translation: MTAKQRPEIKTMANLESAFAGESMAHIKYRYFAKLAREMGDEDTARVFEATADQEVMHAFGHLDLLYPKATMTAAKALQIAIDGETYEYTEMYPGFRATAEAEGHAAAVAEMDEQIGESKEHAAQFRATLEKAQKRFAALAKVEERHANHYKAQLAKAQA
SIO_010081: RFER_RS00455
subclass of: SO_0000673
so part of: RFER_RS00455
location: 92806..93288
location: region:92806-93288:1
so has part: feature:92806-93288:1:exon

WP_011462424.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92806-93288:1:exon

RFER_RS00460
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00460
old locus tag: Rfer_0091
so part of: sequence
location: 93415..93579
location: region:93415-93579:1
so has part: feature:93415-93579:1:exon
subclass of: SO_0000010

position:93415:1
position: 93415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93579:1
position: 93579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93415-93579:1:exon

RFER_RS00460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00460
old locus tag: Rfer_0091
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008906794.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rubredoxin
translation: MKTYLCIVCGFIYDEAAGRPEDGIAPGTRWADVPDTWACPDCGVAKADFEPVEI
SIO_010081: RFER_RS00460
subclass of: SO_0000673
so part of: RFER_RS00460
location: 93415..93579
location: region:93415-93579:1
so has part: feature:93415-93579:1:exon

WP_011462425.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93415-93579:1:exon

RFER_RS00465
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00465
old locus tag: Rfer_0092
so part of: sequence
location: 93595..94899
location: region:93595-94899:1
so has part: feature:93595-94899:1:exon
subclass of: SO_0000010

position:93595:1
position: 93595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94899:1
position: 94899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93595-94899:1:exon

RFER_RS00465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00465
old locus tag: Rfer_0092
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011485718.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-dependent oxidoreductase
translation: MAPPIIIIGAGLAGWTTVRELRKLDQRTPVLLITADSGDFYAKPALSNALQQQRTPAQLVTTPAAQMAATHKVRLLAHTRVLVIDALTRTLRSTRGEFSYRHLVLATGAQPIRLPLAGDAADQVQSINSLDDFSRFHQRLTRAAGCGDKGVGGGSPLNLQSASEHSRRHALIMGAGLIGCEFANDLAAAGYRVTVVDPSTGPMTALLPASASAQLQQALAGLGVRWHFGATVKSVNWAKTGGSIAVAESARVHQVESVLQVELSNGSLAPVDIVLSAIGLKSDTALAQAAGLVCERGIVVDATLQTSSPHIYALGDAAQYATGRWGVAADAAATSVAGARTMPYVMPIMSAARALAATLAGTPTAVAFALMPVAIKTPALPIVVAAPAPGTAGEWRSEASGQWQFMDGQHQVRGFALTGTQTARRAEQAKLVLA
SIO_010081: RFER_RS00465
subclass of: SO_0000673
so part of: RFER_RS00465
location: 93595..94899
location: region:93595-94899:1
so has part: feature:93595-94899:1:exon

WP_011462426.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93595-94899:1:exon

RFER_RS00470
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00470
old locus tag: Rfer_0093
so part of: sequence
location: 94994..97303
location: region:94994-97303:1
so has part: feature:94994-97303:1:exon
subclass of: SO_0000010

position:94994:1
position: 94994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97303:1
position: 97303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94994-97303:1:exon

RFER_RS00470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00470
old locus tag: Rfer_0093
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006408722.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADP-dependent malic enzyme
translation: MPHTTATAADKRAELRRATLEYHEFPTPGKISIAPTKQLINQHDLGLAYTPGVAIPCEEIVKDPNNAYKYTSRGNLVAVVTNGTAVLGLGDIGPLAGKPVMEGKAVLFKKFAGIDVFDIEINEKHDLDKLVDIIASLEPTFGGINLEDIKAPDCFYVERKLRERMKIPVFHDDQHGTAITVGAAILNGLKVAGKDPKDVKLVTSGAGAAALACVGLLVKLGIPRENVWVTDLAGVVYEGRTELMDPDKIIYSQKTSARTLGEVIEGADVFLGLSAGGVLKGEMVKRMAPRPIIFALANPTPEITPEEVKAVRSDAIIGTGRSDYPNQINNILCFPYIFRGALDAGASTITVEMEMAAVHAIADLAQAEQSEVVAAAYVGEPLAFGPEYLIPKPFDPRLMIKVAPAVAQAAFDSGVALRPIADMDAYREKLQSFVYASGTVMKPIFAAAKSALKKRIAYAEGEDERVLRAAQIVVDEGLALPTLIGRPLVIAERINKFGLRLEEGQDYSVVNVEQDHRYRDFWQTYHRMTERKGMTAQVAKIEMRRRLTLIGSMLLQKGDVDGLICGTWGTTAMHLQYLDQVIGKRTGVNTYACMNCLMLPERQLFIVDTHVNYDPTAEQLAEITILAAEEMVRFGIRPKAALLSHSNFGSSNQPSAVKMREALDLLRVKAPWLEVDGEMHGDVALDGAARAALMPNSTLAGDANLLVLPNIDAANIAYNLLKTAAGGNIAVGPVLLGAAKPVHILTASATVRRIVNMTALTVADANASR
SIO_010081: RFER_RS00470
subclass of: SO_0000673
so part of: RFER_RS00470
location: 94994..97303
location: region:94994-97303:1
so has part: feature:94994-97303:1:exon

WP_011462427.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94994-97303:1:exon

RFER_RS00475
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00475
old locus tag: Rfer_0094
so part of: sequence
location: 97461..97853
location: region:97461-97853:1
so has part: feature:97461-97853:1:exon
subclass of: SO_0000010

position:97461:1
position: 97461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97853:1
position: 97853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97461-97853:1:exon

RFER_RS00475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00475
old locus tag: Rfer_0094
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013903129.1
GO function: GO:0004521 - endoribonuclease activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease domain-containing protein
translation: MLRLKSSKLVLTSFFLAAIFACAGVLAKGPAPADAATAIAVTALPKQGVQTYDLIHQGGPFAHEKDGVVFGNRERLLPLQKRGYYREYTVATPNLHARGARRIVCGGAARAPDACYYTADHYASFRRIVP
SIO_010081: RFER_RS00475
subclass of: SO_0000673
so part of: RFER_RS00475
location: 97461..97853
location: region:97461-97853:1
so has part: feature:97461-97853:1:exon

WP_011462428.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97461-97853:1:exon

RFER_RS00480
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00480
old locus tag: Rfer_0095
so part of: sequence
location: 97894..98337
location: region:97894-98337:1
so has part: feature:97894-98337:1:exon
subclass of: SO_0000010

position:97894:1
position: 97894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98337:1
position: 98337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97894-98337:1:exon

RFER_RS00480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00480
old locus tag: Rfer_0095
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019429907.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: barstar family protein
translation: MSLSQETAALQRAATDVPLRGVRPNIVQSIRAFRVPELQGAAQSLGQHFLYANLANAQTKQDVLDLIAQQFMLSVHVGKNFDALYDSMTDPLHKSGPQPGFIVVLEHIPAHAKFDKEAREQLLDIFRDAADYWADRKIPFRCFYSFL
SIO_010081: RFER_RS00480
subclass of: SO_0000673
so part of: RFER_RS00480
location: 97894..98337
location: region:97894-98337:1
so has part: feature:97894-98337:1:exon

WP_244095772.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97894-98337:1:exon

RFER_RS23235
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS23235
so part of: sequence
location: 98316..98537
location: region:98316-98537:1
so has part: feature:98316-98537:1:exon
subclass of: SO_0000010

position:98316:1
position: 98316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98537:1
position: 98537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98316-98537:1:exon

RFER_RS23235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS23235
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005798162.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFLFFSVARSAHTSQAERANEAKGNGVGSQTLSGIELTTESGEKMPTDKLLDISPLALRMSSPFNSGYWLTAA
SIO_010081: RFER_RS23235
subclass of: SO_0000673
so part of: RFER_RS23235
location: 98316..98537
location: region:98316-98537:1
so has part: feature:98316-98537:1:exon

WP_084795411.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:98316-98537:1:exon

RFER_RS00485
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: rsmA
locus tag: RFER_RS00485
old locus tag: Rfer_0096
so part of: sequence
location: complement(98638..99423)
location: region:98638-99423:-1
so has part: feature:98638-99423:-1:exon
subclass of: SO_0000010

position:98638:-1
position: 98638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99423:-1
position: 99423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98638-99423:-1:exon

RFER_RS00485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: rsmA
locus tag: RFER_RS00485
old locus tag: Rfer_0096
EC number: 2.1.1.182
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011462430.1
GO function: GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
translation: MKHIARKRFGQHFLTDGAMIEAIVDAIGPRPGQAMVEIGPGLAALTQPLVERLGQLTVIELDRDLAARLRAHPQLVVIESDVLKVDFAQVAQALTTTKLRVVGNLPYNISTPILFHLLNFIDVIEDQHFMLQKEVIDRMVAGPCTAAYGRLSVMLQWRYAMENVLLVPPESFEPPPRVNSAVVRMVPHVNPAAVDGHLLSELVQVAFSQRRKLLRHTLGQWLQQKGYADEFDVQRRAEEVPVAEYLALALKLATHSQAASH
SIO_010081: RFER_RS00485
subclass of: SO_0000673
so part of: RFER_RS00485
location: complement(98638..99423)
location: region:98638-99423:-1
so has part: feature:98638-99423:-1:exon

WP_011462430.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:98638-99423:-1:exon

RFER_RS00490
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00490
old locus tag: Rfer_0097
so part of: sequence
location: complement(99450..100829)
location: region:99450-100829:-1
so has part: feature:99450-100829:-1:exon
subclass of: SO_0000010

position:99450:-1
position: 99450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100829:-1
position: 100829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99450-100829:-1:exon

RFER_RS00490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00490
old locus tag: Rfer_0097
EC number: 5.2.1.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011462431.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptidylprolyl isomerase
translation: MNHRLVALSVASLALLAPLTVPAQGLRPSSATVGAGVLAPARVPAATGLAADYIVAVVNSEPITNNEVRAALQRVLQQLAQQGNPQVDSKTLVRQVLERLINEKAQLQLARESGIAADEAAIDQAEQNIARQNQLTVAELRRRLTQEGGVPGQFRNQLRDQILLTRLREREVEPRARVSELEIDQFLREQQSSTPAVQQINLAQVLVSVPDTATPVQVTALQARAQRALARARAGEDFVTLVREFSDASDKASLANGGELGLRTADRYPPLFLEATHNLAVGEISALVRSGAGFHILKVLEKKSAALPAMTVTQSRARHILLRVSPQLTESAARDKLNEFKKRVAAGQADFAALARDHSQDGSAAQGGDLGWANPGMFVPEFEAVMNSLTPGQISEPLVSRFGVHLIQLMERRQATLSPQEQREAVRAMLHEKKLDEAYISWAQDVRGRAYVELREPPQ
SIO_010081: RFER_RS00490
subclass of: SO_0000673
so part of: RFER_RS00490
location: complement(99450..100829)
location: region:99450-100829:-1
so has part: feature:99450-100829:-1:exon

WP_011462431.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:99450-100829:-1:exon

RFER_RS00495
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00495
old locus tag: Rfer_0098
so part of: sequence
location: complement(100836..103232)
location: region:100836-103232:-1
so has part: feature:100836-103232:-1:exon
subclass of: SO_0000010

position:100836:-1
position: 100836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103232:-1
position: 103232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100836-103232:-1:exon

RFER_RS00495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00495
old locus tag: Rfer_0098
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011462432.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LPS-assembly protein LptD
translation: MHELDLRPHLARFAQRPLALLAWALLQGTSVNAQVAQVAPDEPPLPLKTSPLLQEQVAPALRSSLPTFISAEHIFGRPDLETVLEGRAELRRGDLVIKADRLEYDQPSDLATASGNVLINRAGNVYEGPLLELKLDTFEGFFNQPRYYFLKNDAHGQADRVDFIDDQRAVIHNATFTTCRRLPGPSWLPDWILRAASISLDNEEDVGTAKGALLSFKGVPLLPIPYLSFPLSDKRKSGVLPPILGLDNVNGAEVSVPYYWNIAPNRDATFTPTLMSKRGVNLSSELRYLEADYAGQVQLDLMPSDQLRDSTRWGLTYTHQATLQNSWTRPFTAGGVALNLNLNRVSDDNYWRDFTRASTGSLTQRLLTNDASLSWTEGNFSNTVRTLKWQTLQDVSAPITPPYDRLPQLATRYARSNVGGFDYSVDADYTRFQSERSLTLQPNAQRVFSVLQLSRPWVTAAGFITPKLQLNVSNYQFDTPLSNGARAASRVVPTLSVDSGLVFERDARYFGMNFRQTLEPRAFYVNTPFRDQRLLPNYDSGAVDFNFATIYTDNAFVGNDRISDSDLLTLGVSTRLLDPATGAQVARFGVAQRLRFRDQNVTLLPTDAPVTDRISDLLLGAAVNWDPKWAFDSTVQFNPTTKQSVRSTIGARYSAGHYRTVSAAYRYQRESSEQLDIGWQWPINDLWGERGQELGAGRGQGEGRWYSVGRLNYSMQERKLVDAVLGFEYDAGCWLGRIVLEQLQTSTASANQRIMFQLEFVGLTRLGVNPLKSLKDNIPGYQYLREQTSPPSRFSNYD
SIO_010081: RFER_RS00495
subclass of: SO_0000673
so part of: RFER_RS00495
location: complement(100836..103232)
location: region:100836-103232:-1
so has part: feature:100836-103232:-1:exon

WP_049765587.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100836-103232:-1:exon

RFER_RS00500
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00500
old locus tag: Rfer_0099
so part of: sequence
location: 103322..104410
location: region:103322-104410:1
so has part: feature:103322-104410:1:exon
subclass of: SO_0000010

position:103322:1
position: 103322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104410:1
position: 104410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103322-104410:1:exon

RFER_RS00500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00500
old locus tag: Rfer_0099
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013903134.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphotransferase
translation: MSTAFPPETTPATAPIWPDAQRAADFSVWLAGLAPAHGLVIDSLRTASADASFRRYLRVDGTQGSYIIMDAPPDKEDCQPFVKVAQLLHQAQVHAPEVLAWDAAHGFMLLTDLGAQTMMQVIKRDDPQANQGLYLQAVDALIAWQSASKPGVLPPYDEALLRRELELFPDWYLARHRGVAVEGEVRRTLDQAFAQIMAHNLAWPSVYVHRDFMPRNLMVAPAGAGQRMGVLDFQDAVYGPITYDIASLMRDAFLSWEEDFCLDITIRYWEKARKAGLAVGDDFGEFYRGVEWMGLQRHLKVAGIFARLTLRDGKPQYLADTPRFISYIRATCARYRELKPLLRLIERIEGLVVADGYAFGRI
SIO_010081: RFER_RS00500
subclass of: SO_0000673
so part of: RFER_RS00500
location: 103322..104410
location: region:103322-104410:1
so has part: feature:103322-104410:1:exon

WP_011462433.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103322-104410:1:exon

RFER_RS00505
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00505
old locus tag: Rfer_0100
so part of: sequence
location: complement(104452..104991)
location: region:104452-104991:-1
so has part: feature:104452-104991:-1:exon
subclass of: SO_0000010

position:104452:-1
position: 104452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104991:-1
position: 104991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104452-104991:-1:exon

RFER_RS00505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00505
old locus tag: Rfer_0100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011481307.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2946 family protein
translation: MDDIVKQALLKWPNVPDCYGWLGLDARGNWFMRDERAQAQGPFAGGSAAGKGSELKHDKLIEFIQRNYQPTTEGQWFFQNGPQRVYVELEATPLIWRVNHDLSIQDHCGRAASVQHCLLDELGHVYLDTSTGFGLVHSMDMDYVADAVLQGLWQPQDVLHADLPSRFNYVPSPYSLQKA
SIO_010081: RFER_RS00505
subclass of: SO_0000673
so part of: RFER_RS00505
location: complement(104452..104991)
location: region:104452-104991:-1
so has part: feature:104452-104991:-1:exon

WP_011462434.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:104452-104991:-1:exon

RFER_RS00510
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00510
old locus tag: Rfer_0101
so part of: sequence
location: complement(105077..105526)
location: region:105077-105526:-1
so has part: feature:105077-105526:-1:exon
subclass of: SO_0000010

position:105077:-1
position: 105077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105526:-1
position: 105526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105077-105526:-1:exon

RFER_RS00510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00510
old locus tag: Rfer_0101
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011481305.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nuclear transport factor 2 family protein
translation: MSKAKKQAASVGGSADEIEASFYEALQTADIDKLMACWADEDEIVCVHPGGPRLVGLGAIRAAFDAIFNNGSIRVQPQAVRKIESLASVVHNVRERIEVLTEDGLVQAFVIATNVYHRTAQGWRMVAHHASPGSQQEAQDGSEIPPVFH
SIO_010081: RFER_RS00510
subclass of: SO_0000673
so part of: RFER_RS00510
location: complement(105077..105526)
location: region:105077-105526:-1
so has part: feature:105077-105526:-1:exon

WP_011462435.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:105077-105526:-1:exon

RFER_RS00515
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00515
old locus tag: Rfer_0102
so part of: sequence
location: 105677..106264
location: region:105677-106264:1
so has part: feature:105677-106264:1:exon
subclass of: SO_0000010

position:105677:1
position: 105677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106264:1
position: 106264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105677-106264:1:exon

RFER_RS00515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00515
old locus tag: Rfer_0102
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013543848.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LemA family protein
translation: MTRWLLILLTALSLTGCGYNDFQRLDEQTKSAWSEVLNQYQRRADLVPNIVATVKGEAAFEQETLTKVIEARAKATSIQVTPETLNNPEAFNKFQAAQGELGSALSRLMAVSEQYPSLKANQGFSDLRVQLEGTENRVTVARNRYIQAVQAYNVLVRSFPSNLTAMVFSYQPKPSFTVQNEAAITTPPVVDFNKK
SIO_010081: RFER_RS00515
subclass of: SO_0000673
so part of: RFER_RS00515
location: 105677..106264
location: region:105677-106264:1
so has part: feature:105677-106264:1:exon

WP_041791150.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:105677-106264:1:exon

RFER_RS00520
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00520
old locus tag: Rfer_0103
so part of: sequence
location: 106284..107204
location: region:106284-107204:1
so has part: feature:106284-107204:1:exon
subclass of: SO_0000010

position:106284:1
position: 106284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107204:1
position: 107204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106284-107204:1:exon

RFER_RS00520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00520
old locus tag: Rfer_0103
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012346104.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TPM domain-containing protein
translation: MRPLFLLQRWPAQLRRLGRWLAVASVGLLLLLSQAQAQLAVPTLVAHVMDATGTLNAVQVQQLEAKLTAFEQSRGTQMVLLLVPTTQPEDIASYSNRVANSWKIGRKEIGDGLLLVVAKDDRRVRIEVAKTLEGAIPDLAAKRVIDQAITPRFKQGDFAGGLDAAVDQLMALIKGEALPVPVAAVRGVKNGFQWTDLAIFMFFAVPVVGAVARSIFGTKLGSLATGGLVGGIALLVTASLAIAALAALVGFVFALFSGLMPGGGRGVGRHGGWGAGGGGFGGGFGGGGFGSGGGGDFGGGGASGRW
SIO_010081: RFER_RS00520
subclass of: SO_0000673
so part of: RFER_RS00520
location: 106284..107204
location: region:106284-107204:1
so has part: feature:106284-107204:1:exon

WP_011462437.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106284-107204:1:exon

RFER_RS00525
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00525
old locus tag: Rfer_0104
so part of: sequence
location: 107204..107725
location: region:107204-107725:1
so has part: feature:107204-107725:1:exon
subclass of: SO_0000010

position:107725:1
position: 107725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107204-107725:1:exon

RFER_RS00525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00525
old locus tag: Rfer_0104
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013899677.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TPM domain-containing protein
translation: MLNRIKRIFRHRWVDESATQHASAPDMLQRLQQRVAASEQRHSGEVRIYIEAGLPLSYLWTNAPTRQIARQRALDLFSQLGVWDTAANNGVLIYLLLAEHAIEVVADRGVNGRVHPSVWPALVTRMSAAFKQAQFEDGLTNALAEVSALLVQHFPLGANEVNPNELPDAPILN
SIO_010081: RFER_RS00525
subclass of: SO_0000673
so part of: RFER_RS00525
location: 107204..107725
location: region:107204-107725:1
so has part: feature:107204-107725:1:exon

WP_011462438.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107204-107725:1:exon

RFER_RS00530
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00530
old locus tag: Rfer_0105
so part of: sequence
location: complement(107821..108237)
location: region:107821-108237:-1
so has part: feature:107821-108237:-1:exon
subclass of: SO_0000010

position:107821:-1
position: 107821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108237:-1
position: 108237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107821-108237:-1:exon

RFER_RS00530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00530
old locus tag: Rfer_0105
EC number: 7.1.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011799689.1
GO function: GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO process: GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: F0F1 ATP synthase subunit epsilon
translation: MNTIHVDVVSAEESIFSGEARFVALPGEVGELGIYPRHTPLISRIKAGSVRIEKADGSEEFVFVAGGLLEVQPNCVTVLSDTAIRGKDLDEEKANAAKLAAEEAMKNAKTDIDLARATSELAVMAAQIAALRKYRQKK
SIO_010081: RFER_RS00530
subclass of: SO_0000673
so part of: RFER_RS00530
location: complement(107821..108237)
location: region:107821-108237:-1
so has part: feature:107821-108237:-1:exon

WP_011462439.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107821-108237:-1:exon

RFER_RS00535
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: atpD
locus tag: RFER_RS00535
old locus tag: Rfer_0106
so part of: sequence
location: complement(108239..109663)
location: region:108239-109663:-1
so has part: feature:108239-109663:-1:exon
subclass of: SO_0000010

position:108239:-1
position: 108239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109663:-1
position: 109663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108239-109663:-1:exon

RFER_RS00535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: atpD
locus tag: RFER_RS00535
old locus tag: Rfer_0106
EC number: 7.1.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011462440.1
GO component: GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
GO function: GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO process: GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: F0F1 ATP synthase subunit beta
translation: MAQDTQTNTAVQGKIVQCIGAVVDVEFPRDQMPKIYDALKLEGSALTLEVQQQLGDGIVRTIALGSSDGLRRGLMVSNTANPIMVPVGTATLGRIMDVLGTPIDERGPVSTEKYASIHRKAPTYDELSPSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMADSGVVNLENLGESKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGKDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPNVVGQDHYETARAVQGTLQRYKELRDIIAILGMDELAPEDKLTVARARKIQRFLSQPFHVAEVFTGSPGKYVSLAETIRGFKMIVAGECDHLPEQAFYMVGTIDEAFEKAKKI
SIO_010081: RFER_RS00535
subclass of: SO_0000673
so part of: RFER_RS00535
location: complement(108239..109663)
location: region:108239-109663:-1
so has part: feature:108239-109663:-1:exon

WP_011462440.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108239-109663:-1:exon

RFER_RS00540
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: atpG
locus tag: RFER_RS00540
old locus tag: Rfer_0107
so part of: sequence
location: complement(109715..110611)
location: region:109715-110611:-1
so has part: feature:109715-110611:-1:exon
subclass of: SO_0000010

position:109715:-1
position: 109715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110611:-1
position: 110611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109715-110611:-1:exon

RFER_RS00540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: atpG
locus tag: RFER_RS00540
old locus tag: Rfer_0107
EC number: 7.1.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011462441.1
GO component: GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
GO function: GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO process: GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: F0F1 ATP synthase subunit gamma
translation: MATGKEIRGKIKNFESTKKITKAMEMISVSKMRKAQERMRAARPYADKVRNIAANLGQANPEYIHAFMKTNEAPVVGMIVVTTDKGLCGGLNTNVLRSVTNKLRDLQSAGMSAQTVAIGNKGFGFLNRIGAKVVSHVTQLGDKPHLERLIGPVKVLLDAYARGEISAVYLSYTKFINTMKQEVVLEQLLPLSAARMQAETEASETASGAKHGWDYIYEPDAQSVIDDLLVRYVEALVYQSVAENMASEHAARMVAMKAATDNAGNVIGELKLVYNKTRQAAITKELSEIVSGAAAIGA
SIO_010081: RFER_RS00540
subclass of: SO_0000673
so part of: RFER_RS00540
location: complement(109715..110611)
location: region:109715-110611:-1
so has part: feature:109715-110611:-1:exon

WP_011462441.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:109715-110611:-1:exon

RFER_RS00545
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: atpA
locus tag: RFER_RS00545
old locus tag: Rfer_0108
so part of: sequence
location: complement(110641..112194)
location: region:110641-112194:-1
so has part: feature:110641-112194:-1:exon
subclass of: SO_0000010

position:110641:-1
position: 110641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112194:-1
position: 112194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110641-112194:-1:exon

RFER_RS00545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: atpA
locus tag: RFER_RS00545
old locus tag: Rfer_0108
EC number: 7.1.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011808279.1
GO component: GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
GO function: GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO process: GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: F0F1 ATP synthase subunit alpha
translation: MQLNPAEISELIKSRIEGLTAGANIRNQGTVVSVTDGIVRIHGLSDVMQGEMLEFPADAEGQPSYGLALNLERDSVGAVILGAYEHISEGNTVKCTGRILEVPVGPELKGRVVNALGQPIDGKGPIDAKMTDVIEKVAPGVIARQSVSQPMQTGLKSIDSMVPVGRGQRELIIGDRQTGKTAVAIDAIINQKGQNMTCVYVAIGQKASSVKNVVRSLEQAGAMEYTIVVAATASESAAMQYVAAYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARVNEKYVEDFTKGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETSLFNAGIRPAINAGISVSRVGGAAQTKLIKNLSGGIRTDLAQYRELAAFAQFASDLDEATRKQLERGARVTELLKQAQYSPLPISLMGATLFAVNKGYLDDIAVNKLLSFEHGLHGYLKDKHAALLAKLEADKAMDKDAEAELNAATAAFKKSFA
SIO_010081: RFER_RS00545
subclass of: SO_0000673
so part of: RFER_RS00545
location: complement(110641..112194)
location: region:110641-112194:-1
so has part: feature:110641-112194:-1:exon

WP_011462442.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110641-112194:-1:exon

RFER_RS00550
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00550
old locus tag: Rfer_0109
so part of: sequence
location: complement(112245..112775)
location: region:112245-112775:-1
so has part: feature:112245-112775:-1:exon
subclass of: SO_0000010

position:112245:-1
position: 112245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112775:-1
position: 112775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112245-112775:-1:exon

RFER_RS00550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00550
old locus tag: Rfer_0109
EC number: 7.1.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011481296.1
GO function: GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO process: GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: F0F1 ATP synthase subunit delta
translation: MAELATIARPYAEALFKASLSDLNGAAVWVEELETIAKNPQLLQFADNPNVTAAQVYELIAGIAQGALPAMAQNFLRTVIENGRLSALPEIAAQFRVMKNAQSGSSDAVVYSAFAIDSTALAELAATLEQRFARKLNVSVQLQPELIGGIRVVVGDEVLDSSVKARLEQMKMALTA
SIO_010081: RFER_RS00550
subclass of: SO_0000673
so part of: RFER_RS00550
location: complement(112245..112775)
location: region:112245-112775:-1
so has part: feature:112245-112775:-1:exon

WP_011462443.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:112245-112775:-1:exon

RFER_RS00555
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00555
old locus tag: Rfer_0110
so part of: sequence
location: complement(112786..113256)
location: region:112786-113256:-1
so has part: feature:112786-113256:-1:exon
subclass of: SO_0000010

position:112786:-1
position: 112786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113256:-1
position: 113256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112786-113256:-1:exon

RFER_RS00555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00555
old locus tag: Rfer_0110
EC number: 7.1.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011481295.1
GO function: GO:0015078 - proton transmembrane transporter activity [Evidence IEA]
GO process: GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: F0F1 ATP synthase subunit B
translation: MNINSTLFLQAIVFAILVWFTMKFVWPPITKALDERAQKIADGLAAADKAKSELSSANKRVEAELALSRTETTARLADADRRGQSIVEEAKSKATEEANKIIAAAKVEAEQQSNKAREVLREQVAALAVKGAEQILRKEVNASVHADLLGRLKLEL
SIO_010081: RFER_RS00555
subclass of: SO_0000673
so part of: RFER_RS00555
location: complement(112786..113256)
location: region:112786-113256:-1
so has part: feature:112786-113256:-1:exon

WP_011462444.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:112786-113256:-1:exon

RFER_RS00560
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: atpE
locus tag: RFER_RS00560
old locus tag: Rfer_0111
so part of: sequence
location: complement(113294..113539)
location: region:113294-113539:-1
so has part: feature:113294-113539:-1:exon
subclass of: SO_0000010

position:113294:-1
position: 113294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113539:-1
position: 113539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113294-113539:-1:exon

RFER_RS00560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: atpE
locus tag: RFER_RS00560
old locus tag: Rfer_0111
EC number: 7.1.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011462445.1
GO function: GO:0015078 - proton transmembrane transporter activity [Evidence IEA]
GO process: GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: F0F1 ATP synthase subunit C
translation: MENILGLVALACGIIVGLGALGASIGIALMGGKFLESSARQPELMNELQTKMFILAGLIDAAFLIGVAIALLFAFAKPFAI
SIO_010081: RFER_RS00560
subclass of: SO_0000673
so part of: RFER_RS00560
location: complement(113294..113539)
location: region:113294-113539:-1
so has part: feature:113294-113539:-1:exon

WP_011462445.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113294-113539:-1:exon

RFER_RS00565
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: atpB
locus tag: RFER_RS00565
old locus tag: Rfer_0112
so part of: sequence
location: complement(113596..114486)
location: region:113596-114486:-1
so has part: feature:113596-114486:-1:exon
subclass of: SO_0000010

position:113596:-1
position: 113596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114486:-1
position: 114486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113596-114486:-1:exon

RFER_RS00565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: atpB
locus tag: RFER_RS00565
old locus tag: Rfer_0112
EC number: 7.1.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018906551.1
GO component: GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]
GO function: GO:0015078 - proton transmembrane transporter activity [Evidence IEA]
GO process: GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: F0F1 ATP synthase subunit A
translation: MAAEHAEVHAQTAGEYIQHHLHHLQKNFSFENVEQHSIVDFSVFNFDSLIYSILLGAMACYFLWRAASKATSGVPGRFQAAVEILSEMVDTQAKGVIHNATSRKLVAPLALTVFVWIFLMNAMDMLPVDAIPALWHTAGPAMGYMNYMRVVPTADLSTTLGMSVSVLLVCLVYNVKIKGLGGWIHELLSAPFGDKFFLYPVNLLMQLIEFAAKTVSHGMRLFGNMFAGELIFMLIALMGGTWAWQFNPLSGWFWLGFGHVIAGTAWSIFHILVITLQAFIFMMLTLIYVGQAHSSH
SIO_010081: RFER_RS00565
subclass of: SO_0000673
so part of: RFER_RS00565
location: complement(113596..114486)
location: region:113596-114486:-1
so has part: feature:113596-114486:-1:exon

WP_011462446.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113596-114486:-1:exon

RFER_RS00570
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00570
old locus tag: Rfer_0113
so part of: sequence
location: complement(114501..114980)
location: region:114501-114980:-1
so has part: feature:114501-114980:-1:exon
subclass of: SO_0000010

position:114501:-1
position: 114501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114980:-1
position: 114980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114501-114980:-1:exon

RFER_RS00570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00570
old locus tag: Rfer_0113
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007847755.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP synthase subunit I
translation: MPLFEFDTDASDEPGFKQLNAEEAQALRERHPSLSPWRVVVWQAAVGLLVALGTWGLTQNLVAGASAAYGAMAVILPAALFARGLSRQRRAANAGSALTGFFVWEMVKIALTVAMLIVAPRLILGLNWLALLAGFVVTMKVYWVAVWLRPVSRQSLNKN
SIO_010081: RFER_RS00570
subclass of: SO_0000673
so part of: RFER_RS00570
location: complement(114501..114980)
location: region:114501-114980:-1
so has part: feature:114501-114980:-1:exon

WP_011462447.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114501-114980:-1:exon

RFER_RS00575
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00575
old locus tag: Rfer_0114
so part of: sequence
location: 115452..116717
location: region:115452-116717:1
so has part: feature:115452-116717:1:exon
subclass of: SO_0000010

position:115452:1
position: 115452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116717:1
position: 116717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115452-116717:1:exon

RFER_RS00575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00575
old locus tag: Rfer_0114
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013901634.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MPDQDFVIRVLDSPLKVDAVAWNTLLAAQDLADEPSPFMRHEYLAAMLESGSATPATGWTARFVTLWQHGQLVGACALYLKDQSYGEYVFDHAWANAYQQLGLAYYPKAVVASPFTPVPGARLLARDADTRTLLVKALLAWCGEQGLSSLHLLFASDADVRACEAAGLMLRHNVQFHWTNRAPTVAPAPAMSVAGTGGYLDFDDFLRSLSREKRKKIGQERRKVRDAGVSFRWSQGTAIASVDWDFFYRCYEHTYDEHGNAPYLSRDFFQRMADTMAEHWLLFVAERNGRPIASSLIALSGVIKGVNGDFGKKTRAKIAYGRYWGALEQVDCLHFEACYYQPLAWCIEHGYQRFEGGAQGEHKMARALMPVKTNSAHWLAHPAFAAAVGRFLAREDEGIHGYLEELARRNPFRRDGSAENL
SIO_010081: RFER_RS00575
subclass of: SO_0000673
so part of: RFER_RS00575
location: 115452..116717
location: region:115452-116717:1
so has part: feature:115452-116717:1:exon

WP_011462448.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:115452-116717:1:exon

RFER_RS00580
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00580
old locus tag: Rfer_0115
so part of: sequence
location: complement(116778..117440)
location: region:116778-117440:-1
so has part: feature:116778-117440:-1:exon
subclass of: SO_0000010

position:116778:-1
position: 116778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117440:-1
position: 117440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116778-117440:-1:exon

RFER_RS00580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00580
old locus tag: Rfer_0115
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019428666.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DsbA family oxidoreductase
translation: MSRPLKIDFVSDISCPWCAIGLSALEQALDRLQNEVAAELHFQPFELNPQMPAGGQDIGEHLAQKYGSTPEQQTQIRDTIRQRGAEVGFSFNPAGRGRIYNTFDAHRLLHWAGLETPSRQPALKKALLVACHSQGQNMESHEVLLAAVAQAGLDVARARAILASDEFAPEVREREAFYTSQGIHSVPTVIINDRHLISGGQPVAVFEQALRQIAANQPGD
SIO_010081: RFER_RS00580
subclass of: SO_0000673
so part of: RFER_RS00580
location: complement(116778..117440)
location: region:116778-117440:-1
so has part: feature:116778-117440:-1:exon

WP_041789963.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:116778-117440:-1:exon

RFER_RS22850
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS22850
old locus tag: Rfer_0116
so part of: sequence
location: 117774..118970
location: region:117774-118970:1
so has part: feature:117774-118970:1:exon
subclass of: SO_0000010

position:117774:1
position: 117774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118970:1
position: 118970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117774-118970:1:exon

RFER_RS22850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS22850
old locus tag: Rfer_0116
inference: COORDINATES: protein motif:HMM:TIGR00254.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GGDEF domain-containing protein
translation: MKSSRNPNKSLWLVLLALMLAFVFETAAWWWASQTPRASSLQGPIWLGLGAALCGLAAAVLLWRQLRTATRATRRARQLLASSLDTLDVGLEIWDEHDRLVLYNKKINLIYKGFHTPADIGQTFEALMRAKLKRQAIPAAIGCEQEWLAQRLASRGTHKAHTLKELTRNQWVNFYETRTSEGYLVAAWVDVTELVLKGKVLEANNQRLAQQTAMDGLTGLANRRRFDEALTVEWQRAARGRTPLSLLMVDIDHFKNYNDNYGHLAGDQCLRRVSSVLSRCVRRAGELVARYGGEEFVLLLPGADMAHACEIAQMCLDLMQQECVAHAASPTSVYVTLSIGVACALPDAMLDDPASLVNAADAAMYRAKSSGRAHYEVADQADWEIDDNTPRTQPSSLS
SIO_010081: RFER_RS22850
subclass of: SO_0000673
so part of: RFER_RS22850
location: 117774..118970
location: region:117774-118970:1
so has part: feature:117774-118970:1:exon

WP_011462450.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:117774-118970:1:exon

RFER_RS00595
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00595
old locus tag: Rfer_0117
so part of: sequence
location: 119521..121602
location: region:119521-121602:1
so has part: feature:119521-121602:1:exon
subclass of: SO_0000010

position:119521:1
position: 119521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121602:1
position: 121602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119521-121602:1:exon

RFER_RS00595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00595
old locus tag: Rfer_0117
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013901259.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MSDLSKPSDAAADSTGSWPVIKKTAGRLLDWFVIQPVIVKLTVLVLAVLIPATAIYSFTLIQKQAAMAEQVKTMTVAGQAGEGVWELNDKLPVVFGSGSLPSFLESKPVERITVVYEPLLWNASERIILIESQGRQYAYYPSDMETRIFTDKAVTAPWGAKLAFIPRSELKPGGVALFERLDQRFAGARPQAGKDSWKAGVSGVLSATLMLGVLAFLYLQLKGQFKSLKFIEPAQVHGSIDDLVGMDDIKAEVAQIKDQYERGAAYAEYGISKPFNVMFSGPAGTGKTKLASYLAKELRLPILFHSAANLETGFVAGGSNTLSRIMAMAKRRKHCIVFLDEAQDLFMKRGGRRKFDDDTANTLLSVLDGVRSKNDAEIIWIVASNFNSETMEMDEAMLRRFQMKVDFRMPNREERLAIIGHYLSQRAGKVLPDLDLRHLVDVTEGRSPADLETIVNQAGIAAVQAGEMIDAATLMQAAERVLVGNVNTNTTQERARDRRIIAVHEWGHFLVDLEHERQLPNSNWEQILADMKTIKISLKANPRTNALGFVFHKQGSNLLKTKSDIEHDVRVLLGGMANEELFFGEEGTTNGAHNDITRVTQLLHHAVGEMGMYRKTRLNFGSLAKDSRRSGEVDEETRSIMEAQSERLYGETKAVLARLKPLTEHLVGKLLEAGEMSLSEALYQIRSFEAKVV
SIO_010081: RFER_RS00595
subclass of: SO_0000673
so part of: RFER_RS00595
location: 119521..121602
location: region:119521-121602:1
so has part: feature:119521-121602:1:exon

WP_011462451.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:119521-121602:1:exon

RFER_RS00600
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00600
old locus tag: Rfer_0118
so part of: sequence
location: complement(121603..121884)
location: region:121603-121884:-1
so has part: feature:121603-121884:-1:exon
subclass of: SO_0000010

position:121603:-1
position: 121603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121884:-1
position: 121884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121603-121884:-1:exon

RFER_RS00600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00600
old locus tag: Rfer_0118
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNLSSSCTTLPLAPAEDPWLARLLRRTARTSGRYLATFWNLRLGRPAVEGRRLPVREMSTDMLRDLNLQHCFHAQRELDRYEQTRAGLPLSHF
SIO_010081: RFER_RS00600
subclass of: SO_0000673
so part of: RFER_RS00600
location: complement(121603..121884)
location: region:121603-121884:-1
so has part: feature:121603-121884:-1:exon

WP_166485616.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:121603-121884:-1:exon

RFER_RS00605
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00605
old locus tag: Rfer_0119
so part of: sequence
location: 121970..122905
location: region:121970-122905:1
so has part: feature:121970-122905:1:exon
subclass of: SO_0000010

position:121970:1
position: 121970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122905:1
position: 122905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121970-122905:1:exon

RFER_RS00605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00605
old locus tag: Rfer_0119
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010930705.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR substrate-binding domain-containing protein
translation: MLTSMPRIPLQTLPTFRAVARLSNLRAAAEQLHLTHSAISQQMRVLEQQLGFALFDRRGRRVVLNAAGAALLGAVEPALEQIDAGVRAAALAASGTEQSLRLTTLPSFAQHWLLPRMARWREQHPGIAIDLHTSLQVIDLQREGYHAALRQGKGPWQGLTATCLIDSPLIVVASPEVARRLAGGDPAALVHEPLLGEAQRWNRWFALAGQRCRIKPVAVFNDMGMLLLAAEQGLGVALGRQLLAADALRDGRLVQLSPIALADQGADTFWLLHPPELQDWPPLVALRDWLQQELLSSASQLEQPPVGSASL
SIO_010081: RFER_RS00605
subclass of: SO_0000673
so part of: RFER_RS00605
location: 121970..122905
location: region:121970-122905:1
so has part: feature:121970-122905:1:exon

WP_041789967.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:121970-122905:1:exon

RFER_RS00610
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00610
old locus tag: Rfer_0120
so part of: sequence
location: complement(123047..124606)
location: region:123047-124606:-1
so has part: feature:123047-124606:-1:exon
subclass of: SO_0000010

position:123047:-1
position: 123047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124606:-1
position: 124606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123047-124606:-1:exon

RFER_RS00610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00610
old locus tag: Rfer_0120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015013173.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PAS domain-containing methyl-accepting chemotaxis protein
translation: MRMNLPVTQREFDYPAEHMLVSTTDSKGFITHCNRAFVAVSGYTYDELIGQNHNLIRHPDMPAAAFKDLWSSVGRGRPWTGMVKNRRADGDHYWVQANVTPIMENGKPRGYMSVRIKPSRQEIKAAEGLYAQMNAAQESGKLPFHLQGGQVHYKGVRGMAGRIRRMTLTSRLGLALGFMIALGMLPQWLDLQGMSGLGLKLGSLLAGAALVLLWFHKNFDTAMGEAGRFADDLAGCNLTTSVATHFPPPLDSLIRSLRQIQANLQAVVGDVRGEIASFTRSAAEIAAGSLNLSARTESQASSLQQTAASMEEISSTVRQTADTAAQVSAQSAISTRVATRGGEAMHQVGLAMQAIESSSTEVREIVDVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRALATRSAVAAKEIRTLIAQSVDQISQVTQQMTGAGDTIDEVVQSVRQVGELIQQISNTTQEQSLGISQVNEAVIQLDAVTQQNAALVEESAASANGLSDSAVTLARSVQVFRLG
SIO_010081: RFER_RS00610
subclass of: SO_0000673
so part of: RFER_RS00610
location: complement(123047..124606)
location: region:123047-124606:-1
so has part: feature:123047-124606:-1:exon

WP_011462454.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123047-124606:-1:exon

RFER_RS00615
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00615
old locus tag: Rfer_0121
so part of: sequence
location: 124739..125845
location: region:124739-125845:1
so has part: feature:124739-125845:1:exon
subclass of: SO_0000010

position:124739:1
position: 124739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125845:1
position: 125845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124739-125845:1:exon

RFER_RS00615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00615
old locus tag: Rfer_0121
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019451408.1
GO function: GO:0004024 - alcohol dehydrogenase activity, zinc-dependent [Evidence IEA]; GO:0051903 - S-(hydroxymethyl)glutathione dehydrogenase activity [Evidence IEA]
GO process: GO:0006113 - fermentation [Evidence IEA]; GO:0009404 - toxin metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase
translation: MKTRAAVAWKAGAPLSIETVDLQGPKFGEVLVEIKATGICHTDYYTLSGADPEGIFPAILGHEGAGIVVDVGPGVTSLQKGDHVIPLYTPECRRCKYCLSRKTNLCQLIRGTQGQGLMPDASSRFSLDGKPIFHYMGTSTFSNYTVVPEIALAKIRKDAPFDKVCYIGCGVTTGIGAVLFTAKVEVGANVVVFGLGGIGLNVIQGAKMVGADKIIGVDINPARQEMARKFGMTHFINPKEVDNVVETIVQLTDGGADYSFECIGNTKVMRQALECTHKGWGRSIIIGVAEAGAEISTRPFQLVTGRKWEGSAFGGARGRTDVPKIVDWYMEGKINIDDLITHTMPLEDINKGFDLMKSGESIRGVVLF
SIO_010081: RFER_RS00615
subclass of: SO_0000673
so part of: RFER_RS00615
location: 124739..125845
location: region:124739-125845:1
so has part: feature:124739-125845:1:exon

WP_011462455.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:124739-125845:1:exon

RFER_RS00620
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: fghA
locus tag: RFER_RS00620
old locus tag: Rfer_0122
so part of: sequence
location: 125842..126711
location: region:125842-126711:1
so has part: feature:125842-126711:1:exon
subclass of: SO_0000010

position:125842:1
position: 125842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126711:1
position: 126711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125842-126711:1:exon

RFER_RS00620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: fghA
locus tag: RFER_RS00620
old locus tag: Rfer_0122
EC number: 3.1.2.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011805957.1
GO function: GO:0018738 - S-formylglutathione hydrolase activity [Evidence IEA]
GO process: GO:0046292 - formaldehyde metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S-formylglutathione hydrolase
translation: MMAALELLSEHACFGGVQRFYRHVSTVIGLPMRFSVYLPPQARSQTVPAVMYLAGLTCTEETFMAKAGAQRVAAELGLALIAPDTSPRGAGVPGEAESWDFGVGAGFYLDATQAPWSRHYRMETCLISELLPLLAPALPVDAQRLGISGHSMGGHGALTLALRHPGLFKSVSAFAPICAPTQCPWGHKAFAAYLGADTTQWAAHDASALMSECSTAPYPAGILIDQGLADKFLPTQLNPHLFEAACAKAGQPLTLRRHAGYDHGYYFISTFMADHLAHHAQTLLAPRSS
SIO_010081: RFER_RS00620
subclass of: SO_0000673
so part of: RFER_RS00620
location: 125842..126711
location: region:125842-126711:1
so has part: feature:125842-126711:1:exon

WP_085998754.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:125842-126711:1:exon

RFER_RS00625
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00625
old locus tag: Rfer_0123
so part of: sequence
location: complement(126815..127846)
location: region:126815-127846:-1
so has part: feature:126815-127846:-1:exon
subclass of: SO_0000010

position:126815:-1
position: 126815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127846:-1
position: 127846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126815-127846:-1:exon

RFER_RS00625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00625
old locus tag: Rfer_0123
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019572580.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MSSIVPENNPSSAHKSSARDWIMKIFLHWGVMPFLLVIAVVTFSLMSSRFLTTDNLINLFRQSVYLVLVSLGQMLALISGGFDLSVGTIVAVSSVVSALTMGALALSFPDAIWLVITLGCLAGLGAAMLIGMVNGAGVAVFGVSPFIMTLGMQSIGFGIALFLTAGVPVSNLPDTLGDVFGFGVLLGVPVPILMMLLILALMFVLLNYSAWGRHLYAVGSNPKAALLSGIRVKPVLISAYVLCALIAGVSGLLLTARTASGDANLGGSMALESIAACVIGGVSLRGGIGRLENVVLGAIFIGLVQNGMNLAQIGSYLQIVVLGVLLIIAVVFDRIRQKRLYRL
SIO_010081: RFER_RS00625
subclass of: SO_0000673
so part of: RFER_RS00625
location: complement(126815..127846)
location: region:126815-127846:-1
so has part: feature:126815-127846:-1:exon

WP_011462457.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:126815-127846:-1:exon

RFER_RS00630
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00630
old locus tag: Rfer_0124
so part of: sequence
location: complement(127875..129368)
location: region:127875-129368:-1
so has part: feature:127875-129368:-1:exon
subclass of: SO_0000010

position:127875:-1
position: 127875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129368:-1
position: 129368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127875-129368:-1:exon

RFER_RS00630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00630
old locus tag: Rfer_0124
EC number: 7.5.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010104439.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sugar ABC transporter ATP-binding protein
translation: MSDVLLSIEGLSKKFPGVRALDGVDFELLAGEVHAIFGENGAGKSTLISIIAGAQPQGSGIIRMHGEELRFSSVADARRHGISAVFQEFSLAPHLTVEENLCLGEERLHQRFGLLQLSAMSRHASALLQRLNFDIDPQRVVATLSRAEQQMVEIAKALRAKLSVLILDEPTASLTERESEQLFATVRSLKQQGVGIIYITHRIQEIKRLADRVTVLRDGKHIGVVDAATTTEAKLIEMMAGRTVEKIYPSIAANPGRTILELSQMRGGVGIDVDHFVAREGEVVGVAGLVGCGKSELLRMAFGIEPMKSGVVKLDGQTIKKPTPRRMLDAGVFYLPPDRREEGLMLSASTADNISLNALTQQPIHFRSGFLSLSAERTVTRDIGRRVDIHPSNMPRATALLSGGNQQKVLFGRGLTRSIKLYIFDEPTVGVDVGTRSAIYYLIKELCEKGAAVILISSDLPEILHLSHRAYVMRSGRIAAEIDRSCLTEAAVLQHFF
SIO_010081: RFER_RS00630
subclass of: SO_0000673
so part of: RFER_RS00630
location: complement(127875..129368)
location: region:127875-129368:-1
so has part: feature:127875-129368:-1:exon

WP_011462458.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:127875-129368:-1:exon

RFER_RS00635
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: torT
locus tag: RFER_RS00635
old locus tag: Rfer_0125
so part of: sequence
location: complement(129460..130530)
location: region:129460-130530:-1
so has part: feature:129460-130530:-1:exon
subclass of: SO_0000010

position:129460:-1
position: 129460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:130530:-1
position: 130530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129460-130530:-1:exon

RFER_RS00635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: torT
locus tag: RFER_RS00635
old locus tag: Rfer_0125
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010104437.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TMAO reductase system periplasmic protein TorT
translation: MKKISAPTLFAGVLLTASFAAPAANWYPYAAEQTEPAFSDTGVKKPIDYSPLPKASKKWKLCVSFPHMKDAYWLGVDYGVVEEAKRLGVSAQVLEAGGYTNLNKQISQIEDCVAGGGQAVVIGGISADGLVNLVKSLKAKNIPTVDVINGINSPDLTAKSLVSFYTMGQEAGAYLAKKHPAGSAKAVVAWFPGPAGAGWVEAANKGFAEAVKGSSLEVMAPIYGDTGKEVQAKLVEDALQSNPAIRYIAGTAVTAEVSQGIVRARNLKDKVQVISFYLTPDVYAGIEKGTIMASPADAMVIQGRIAIDQAVRALEGKDLIKHVGPKIVTIDKANLKQIRRDDVLPPASFKPLFEVK
SIO_010081: RFER_RS00635
subclass of: SO_0000673
so part of: RFER_RS00635
location: complement(129460..130530)
location: region:129460-130530:-1
so has part: feature:129460-130530:-1:exon

WP_011462459.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:129460-130530:-1:exon

RFER_RS00640
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00640
old locus tag: Rfer_0126
so part of: sequence
location: complement(130638..131615)
location: region:130638-131615:-1
so has part: feature:130638-131615:-1:exon
subclass of: SO_0000010

position:130638:-1
position: 130638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131615:-1
position: 131615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130638-131615:-1:exon

RFER_RS00640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00640
old locus tag: Rfer_0126
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012201949.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: biotin-dependent carboxyltransferase family protein
translation: MAIKVLQPGLATTVQDAGRIGYYHLGIPLSGALDQYSFRAANLLVGNSEDAATLEITMLGPKLEFMHDAAIALTGANLPAKLDGVPIPNNQVVAVKAGSVLSFDFLKDGVRAYLAVAGGIDVPEVLGSRSTYTLGAIGGFCGRKLQAGDVLPVGAFQGPSHVGKKLPDHLKQALPKQVQVRVLPGLYFHWLTQASGKSFFEDTWQVGPEADRIGYRFKHGRPLEFEPRERPFGAGSDPSNIVDAGYPIGSIQVPGGLEPIVLHRDAVSGGGYAMIGTVISADMDVVAQLQPNFQTQFVAVDMAQALSARAKRNQRLADLRQALLN
SIO_010081: RFER_RS00640
subclass of: SO_0000673
so part of: RFER_RS00640
location: complement(130638..131615)
location: region:130638-131615:-1
so has part: feature:130638-131615:-1:exon

WP_011462460.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:130638-131615:-1:exon

RFER_RS00645
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00645
old locus tag: Rfer_0127
so part of: sequence
location: complement(131605..132489)
location: region:131605-132489:-1
so has part: feature:131605-132489:-1:exon
subclass of: SO_0000010

position:131605:-1
position: 131605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132489:-1
position: 132489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131605-132489:-1:exon

RFER_RS00645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00645
old locus tag: Rfer_0127
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019572576.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: allophanate hydrolase subunit 1
translation: MSLPPARYSFGGDEHIFVELNHEMSLEAFFKGMSITNAIAQRKIAGVTEICPANASYQVRFDPDLMAPDKLMEILKSIEIELGDGALELNTRIIEIPVFYNDPWTNETQQRFRERHQDPTSTDLEYGARVNGYANVDAFIAAHAASPWFVSMVGFVAGLPFMFQMVERTKQIQVPKYLRPRTDTPKLTIGHGGCFGCIYSVRGAGGYQMFGITPAPIFDPQQSLPYVKDFMVFFRPGDIVKFKPINRSEYDAALTKVQDGSFDLRIREVKFSLQDFVKDPSAYNQQLTETLYGN
SIO_010081: RFER_RS00645
subclass of: SO_0000673
so part of: RFER_RS00645
location: complement(131605..132489)
location: region:131605-132489:-1
so has part: feature:131605-132489:-1:exon

WP_011462461.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:131605-132489:-1:exon

RFER_RS00650
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00650
old locus tag: Rfer_0128
pseudo: true
so part of: sequence
location: complement(132522..133917)
location: region:132522-133917:-1
so has part: feature:132522-133917:-1:exon
subclass of: SO_0000010

position:132522:-1
position: 132522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133917:-1
position: 133917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132522-133917:-1:exon

RFER_RS00650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00650
old locus tag: Rfer_0128
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006388079.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: acetyl-CoA carboxylase biotin carboxylase subunit
SIO_010081: RFER_RS00650
subclass of: SO_0000673
so part of: RFER_RS00650
location: complement(132522..133917)
location: region:132522-133917:-1
so has part: feature:132522-133917:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:132522-133917:-1:exon

RFER_RS00655
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00655
old locus tag: Rfer_0129
so part of: sequence
location: complement(133964..134197)
location: region:133964-134197:-1
so has part: feature:133964-134197:-1:exon
subclass of: SO_0000010

position:133964:-1
position: 133964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134197:-1
position: 134197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133964-134197:-1:exon

RFER_RS00655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00655
old locus tag: Rfer_0129
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017775139.1
GO component: GO:0009317 - acetyl-CoA carboxylase complex [Evidence IEA]
GO function: GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]
GO process: GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetyl-CoA carboxylase
translation: MAEIISPLPGTFYRRPAPDAPNYKQVGDSVAIDEVIGLVEVMKMFNEVRAEVSGKVVRYTIDNEDPVEAGQVLMIIE
SIO_010081: RFER_RS00655
subclass of: SO_0000673
so part of: RFER_RS00655
location: complement(133964..134197)
location: region:133964-134197:-1
so has part: feature:133964-134197:-1:exon

WP_011462462.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133964-134197:-1:exon

RFER_RS00660
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00660
old locus tag: Rfer_0130
so part of: sequence
location: complement(134275..135039)
location: region:134275-135039:-1
so has part: feature:134275-135039:-1:exon
subclass of: SO_0000010

position:134275:-1
position: 134275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135039:-1
position: 135039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134275-135039:-1:exon

RFER_RS00660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00660
old locus tag: Rfer_0130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011812259.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 5-oxoprolinase subunit PxpA
translation: MDLNSDMGEGFGPWSIGEGADEAIMSQISSANIATGFHAGDPNIMQRMVSYAKQYGVGIGAHPGFRDLVGFGRRDIKASSSELLNDVIYQTGALREFAHWQGVRLQHVKLHGALYMRAAVDEEFSIALIKALQEIEPSLYLYCMEASVTYQVAKRMGHPVVREFYGDRNYDKTGSIVFTRQVGQLDPATVAARALRACTHGVVRTVEGEDIAIDFDSICIHSDTPGALALIKATKNALTSNGIKIASLSEVVPR
SIO_010081: RFER_RS00660
subclass of: SO_0000673
so part of: RFER_RS00660
location: complement(134275..135039)
location: region:134275-135039:-1
so has part: feature:134275-135039:-1:exon

WP_244095773.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134275-135039:-1:exon

RFER_RS00665
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00665
old locus tag: Rfer_0131
so part of: sequence
location: 135237..136160
location: region:135237-136160:1
so has part: feature:135237-136160:1:exon
subclass of: SO_0000010

position:135237:1
position: 135237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136160:1
position: 136160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135237-136160:1:exon

RFER_RS00665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00665
old locus tag: Rfer_0131
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010107472.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MRFSLRQIKYFAATAELGQISRAAVELSVSQSAVTISIRDLEEGLGYKLFIRQSHGMELTDNGRHFLTRAYAILAAVDDARNMPQEIAPVSGELTLAATYTVMGYFLPDHLQRLSLLYPALRIRMLELDRDTIESGLLAQNYDMAMLLTSNVRNPAIQTETLFSSQRRLWVSPQHRFAAKRQVSFADIAQEPFIMLTVDEAADSALRYWHLHGFEPNVALNTKSIEAVRSLVANDLGVAILSDMVYRPWSLEGKRIETIKPVESIPSMNVGLAWRADASMSPAMNTVRQYFKQRYLDPQNPHGSSHR
SIO_010081: RFER_RS00665
subclass of: SO_0000673
so part of: RFER_RS00665
location: 135237..136160
location: region:135237-136160:1
so has part: feature:135237-136160:1:exon

WP_011462464.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:135237-136160:1:exon

RFER_RS00670
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: ubiD
locus tag: RFER_RS00670
old locus tag: Rfer_0132
so part of: sequence
location: complement(136207..137691)
location: region:136207-137691:-1
so has part: feature:136207-137691:-1:exon
subclass of: SO_0000010

position:136207:-1
position: 136207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137691:-1
position: 137691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136207-137691:-1:exon

RFER_RS00670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: ubiD
locus tag: RFER_RS00670
old locus tag: Rfer_0132
EC number: 4.1.1.98
inference: COORDINATES: similar to AA sequence:RefSeq:WP_041322210.1
GO function: GO:0016831 - carboxy-lyase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4-hydroxy-3-polyprenylbenzoate decarboxylase
translation: MAYRDLRDFITQLEHLGELKRVQAEVSPYLEMTALCDRTLRAGGPALLFENPTGHNTPVLGNLFGTTRRVALGMGVNDVSELRQFGHVLASLKEPEAPKGFKELMGLGSLVKTLWAMAPKELRSAPCQEIIWEGADVDLARLPIQHCWPGDVAPLITWGLVITQGPHKARQNLGIYRQQVLARNKVIMRWLAQRGGALDFKEHAALNPGQPYPVCVALGADPATILGAVTPVPDSLSEYQFAGLLRGSRTELVKALGSELRVPAFAEIVLEGHIYPDATHASGFEHALEGPFGDHTGYYNEQDWFPVFTIDRITQRRDPIYHSTYTGKPPDEPAMLALALNELFVPLLQRQYPEITDFYLPPEGCSYRLAVVQIKKSYPGHARRVMFGIWSFLRQFMYTKFIVVVDDDVNIRDWKDVIWAITTRVDPTRDTLLADSTPIDYLDFASPVSGLGSKMGLDATNKWPGETSREWGRPLTMSADVTARVEQVWQTLGL
SIO_010081: RFER_RS00670
subclass of: SO_0000673
so part of: RFER_RS00670
location: complement(136207..137691)
location: region:136207-137691:-1
so has part: feature:136207-137691:-1:exon

WP_011462465.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:136207-137691:-1:exon

RFER_RS00675
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00675
old locus tag: Rfer_0133
so part of: sequence
location: complement(137732..138322)
location: region:137732-138322:-1
so has part: feature:137732-138322:-1:exon
subclass of: SO_0000010

position:137732:-1
position: 137732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138322:-1
position: 138322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137732-138322:-1:exon

RFER_RS00675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00675
old locus tag: Rfer_0133
EC number: 2.5.1.129
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016346372.1
GO function: GO:0016831 - carboxy-lyase activity [Evidence IEA]; GO:0106141 - flavin prenyltransferase activity [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UbiX family flavin prenyltransferase
translation: MDATAIPLKRVIVAISGASGAVYGVRLLQMLRGMQGVQTHLTVSEAGWLNVQQELDMARAEVEALADVVYPVQNVGAAIASGSFQCDGMVVAPCAMRTLAAVALGLSDNLITRAADVMLKERRRLILMVRETPLNLAHLRNMTSVTEMGGIIFPPVPGFYHRPQSINEMVDHSVSRVIDLLGLPQPDATRWTGLAS
SIO_010081: RFER_RS00675
subclass of: SO_0000673
so part of: RFER_RS00675
location: complement(137732..138322)
location: region:137732-138322:-1
so has part: feature:137732-138322:-1:exon

WP_049765589.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:137732-138322:-1:exon

RFER_RS00680
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00680
old locus tag: Rfer_0134
so part of: sequence
location: complement(138298..138780)
location: region:138298-138780:-1
so has part: feature:138298-138780:-1:exon
subclass of: SO_0000010

position:138298:-1
position: 138298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138780:-1
position: 138780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138298-138780:-1:exon

RFER_RS00680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00680
old locus tag: Rfer_0134
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011871161.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SCP2 sterol-binding domain-containing protein
translation: MSAKPLLIPTPLGAMLGRLPAYPGSLFFVTGLNLALSKQLAPDVTQMLLGKKLRLRVTDAHWAFDFEWRNKHFAACQNVGEADLTISASAHDFVLLARRQEDPDTLFFSRRLAMEGDTELGLLVKNTIDAIELPMVNLEPFKPAQVLARLRARWTLRQSH
SIO_010081: RFER_RS00680
subclass of: SO_0000673
so part of: RFER_RS00680
location: complement(138298..138780)
location: region:138298-138780:-1
so has part: feature:138298-138780:-1:exon

WP_011462467.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:138298-138780:-1:exon

RFER_RS00685
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00685
old locus tag: Rfer_0135
so part of: sequence
location: complement(138799..139707)
location: region:138799-139707:-1
so has part: feature:138799-139707:-1:exon
subclass of: SO_0000010

position:138799:-1
position: 138799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139707:-1
position: 139707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138799-139707:-1:exon

RFER_RS00685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00685
old locus tag: Rfer_0135
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013519935.1
GO process: GO:0006744 - ubiquinone biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: U32 family peptidase
translation: MKLALGPILYYWPRDEVLAFYDAVAQSPVDIVYLGEAVCSRRHEVRLNDWLDIAAALRDAGKEVVLSTQVLIESGADVTVLHKIAANGQFMVEANDMGAVHCLEGKVPFVAGPHLNIYNVPTLQWMAALGIKRWVMPLEMGRDDLALLLAGCPPGVQTEVFAYGRMPLAFSARCFTARHCNLPKDDCQFKCIEHPDGLVMRTRESEEFLVLNGIQTQSARVHNLLAELPAMRDMGVDVVRISPQSRHTVRIVELFQAVIQGRMGVTAASTELAALMPEKACNGYWYGQPGLEQVAASPEQVS
SIO_010081: RFER_RS00685
subclass of: SO_0000673
so part of: RFER_RS00685
location: complement(138799..139707)
location: region:138799-139707:-1
so has part: feature:138799-139707:-1:exon

WP_011462468.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:138799-139707:-1:exon

RFER_RS00690
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00690
old locus tag: Rfer_0136
so part of: sequence
location: complement(139829..140887)
location: region:139829-140887:-1
so has part: feature:139829-140887:-1:exon
subclass of: SO_0000010

position:139829:-1
position: 139829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140887:-1
position: 140887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139829-140887:-1:exon

RFER_RS00690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00690
old locus tag: Rfer_0136
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012763159.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptidase U32 family protein
translation: MNTILDNSLVPPLAVPVAASMELVCPAGSLPALKAAVDNGADCVYLGFRDATNARNFAGLNFDEAAIETGIRYAHDRGRKVFVALNTYPQAAKAELWQRAVDRAAHSGVDAVILADPGMMAYAVKHQPQLRLHLSVQGSATNYEALDFYYQHFGIARAVLPRVLSLTQVEQVLEKTSVEIEVFGFGSLCVMVEGRCALSSYVTGEAPNTNGVCSPPKAVRWVETPQGRESRLNGVLIDRYATGENAGYPTLCKGRFDVGDEKNYYAIEEPTSLNTLSLLPELMRIGVRAIKIEGRQRSPAYVAQVTKVWREAIDSCRTNPQLYAAKPAWMSSLDKVAEGQQHTLGAYHRPWK
SIO_010081: RFER_RS00690
subclass of: SO_0000673
so part of: RFER_RS00690
location: complement(139829..140887)
location: region:139829-140887:-1
so has part: feature:139829-140887:-1:exon

WP_041791162.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:139829-140887:-1:exon

RFER_RS00695
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00695
old locus tag: Rfer_0137
so part of: sequence
location: complement(141058..141354)
location: region:141058-141354:-1
so has part: feature:141058-141354:-1:exon
subclass of: SO_0000010

position:141058:-1
position: 141058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141354:-1
position: 141354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141058-141354:-1:exon

RFER_RS00695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00695
old locus tag: Rfer_0137
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013722241.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2249 domain-containing protein
translation: MSACFATTIDLRRVAPPARHSLIFSSFSDLLPGQSLELINDHDPQPLNEQFQMRSPGVFSWSYLEKGPQVWRVQIGKNAASAASGASDSCCSGGACCG
SIO_010081: RFER_RS00695
subclass of: SO_0000673
so part of: RFER_RS00695
location: complement(141058..141354)
location: region:141058-141354:-1
so has part: feature:141058-141354:-1:exon

WP_011462470.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:141058-141354:-1:exon

RFER_RS00700
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00700
old locus tag: Rfer_0138
so part of: sequence
location: complement(141488..142135)
location: region:141488-142135:-1
so has part: feature:141488-142135:-1:exon
subclass of: SO_0000010

position:141488:-1
position: 141488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142135:-1
position: 142135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141488-142135:-1:exon

RFER_RS00700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00700
old locus tag: Rfer_0138
inference: COORDINATES: protein motif:HMM:TIGR03308.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DapH/DapD/GlmU-related protein
translation: MHYTHIAAHNLPPPASLGLAPTLSASAIVRDCRFGRYTQVGEQTRMGDCLLDDYAYVQHNCDLMSTDIGKFANIANMVRINPGFHPMERPTLHHFTYRPTMYGMDTQDDADFFAWRLRQRVVIGHDTWIGHGAVIMPGVHIGNGAVVGSNSVVTRDVASYAIVAGAPATVIRQRFPRAIAQALEATAWWDWDHDTLTERMPDFKDMRCFLAKYAP
SIO_010081: RFER_RS00700
subclass of: SO_0000673
so part of: RFER_RS00700
location: complement(141488..142135)
location: region:141488-142135:-1
so has part: feature:141488-142135:-1:exon

WP_011462471.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:141488-142135:-1:exon

RFER_RS00705
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00705
old locus tag: Rfer_0139
so part of: sequence
location: complement(142208..143350)
location: region:142208-143350:-1
so has part: feature:142208-143350:-1:exon
subclass of: SO_0000010

position:142208:-1
position: 142208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143350:-1
position: 143350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142208-143350:-1:exon

RFER_RS00705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00705
old locus tag: Rfer_0139
EC number: 3.6.1.63
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013901571.1
GO function: GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
GO process: GO:0019700 - organic phosphonate catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase
translation: MKQRIFRNARIVTPDNEFTGCLVVEDGIIRSMDSGNTSVPGAQDWAGDWLLPGLVEVHTDNLEKHLSPRPGVLWNAHSAMTVHDAQCAAAGITTVLDSVVIGDLDDDGTRSQTQHTSIAALHQCHEEGLMRVEHLLHLRCELSAPDMLEVFHEYADDSLLALVSMMDHTPGQRQWRDLKSYRRYTERNGSYNDAEFAAMIAQRKADQQAFSLPHRVEIVRECQARGLPLASHDDTLLSDIAQAVAEGVAMSEFPTTVAAAQAARAAGMAIIMGGPNMVKGGSHSGNVSAAELAQLDLLDIFSSDYVPSSLLLGTFMLGQLEGWTLPKAVRTVTVNPARAIRLQDRGDVAPGQRADLLRVRMNRVGMPVVLEAWLAGKRAF
SIO_010081: RFER_RS00705
subclass of: SO_0000673
so part of: RFER_RS00705
location: complement(142208..143350)
location: region:142208-143350:-1
so has part: feature:142208-143350:-1:exon

WP_011462472.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:142208-143350:-1:exon

RFER_RS00710
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: phnL
locus tag: RFER_RS00710
old locus tag: Rfer_0140
so part of: sequence
location: complement(143370..144068)
location: region:143370-144068:-1
so has part: feature:143370-144068:-1:exon
subclass of: SO_0000010

position:143370:-1
position: 143370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144068:-1
position: 144068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143370-144068:-1:exon

RFER_RS00710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: phnL
locus tag: RFER_RS00710
old locus tag: Rfer_0140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013901572.1
GO function: GO:0018835 - carbon phosphorus lyase activity [Evidence IEA]
GO process: GO:0019634 - organic phosphonate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphonate C-P lyase system protein PhnL
translation: MTALIETLCLSKTFTLHGRGGLQLPVFAGIDLSVHPGECLALTGHSGSGKSSLLRCLYGNYGASSGEVRIRHSGDWVSLSSAAPREVFEVRRRTLGYVSQFLRVIPRVSTLDIVADPLRRLGVGAEEARAQAAQWLKRLNLHEHLWHLPPATFSGGEQQRVNIAHGMITAPPVLLLDEPTASLDADNRHVVVELIHAARAQGSAIVGIFHDDEVRAAVATRCFDVEQHRNPV
SIO_010081: RFER_RS00710
subclass of: SO_0000673
so part of: RFER_RS00710
location: complement(143370..144068)
location: region:143370-144068:-1
so has part: feature:143370-144068:-1:exon

WP_011462473.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:143370-144068:-1:exon

RFER_RS00715
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: phnK
locus tag: RFER_RS00715
old locus tag: Rfer_0141
so part of: sequence
location: complement(144065..144949)
location: region:144065-144949:-1
so has part: feature:144065-144949:-1:exon
subclass of: SO_0000010

position:144065:-1
position: 144065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144949:-1
position: 144949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144065-144949:-1:exon

RFER_RS00715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: phnK
locus tag: RFER_RS00715
old locus tag: Rfer_0141
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006222785.1
GO function: GO:0018835 - carbon phosphorus lyase activity [Evidence IEA]
GO process: GO:0019634 - organic phosphonate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphonate C-P lyase system protein PhnK
translation: MSAAPGRPQASSHRSAQHEGTPVIPPVLLSARQVGKAFVHQGQPRWACRGVSFDLYPGEVLAVVGESGSGKSTLLRLLAARLACDEGSVHYDVRAESPNESGSESTGLVDLAELSEARLRWLARTDWGFVEQHARDGLRMNVSGGANVGERLMALGARHYGHLRSEASSWMQRVELDAGRMDDLPATYSGGMQQRLQIARNLVTHPRLVFMDEPTTGLDVSVQARLLDLLRELVDELQLAAVVVTHDLAVARLLAQRMLVMKDGCVVEQGLTDRVLDDPQHPYTQLLVSSVLTP
SIO_010081: RFER_RS00715
subclass of: SO_0000673
so part of: RFER_RS00715
location: complement(144065..144949)
location: region:144065-144949:-1
so has part: feature:144065-144949:-1:exon

WP_011462474.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:144065-144949:-1:exon

RFER_RS00720
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00720
old locus tag: Rfer_0142
so part of: sequence
location: complement(144946..145866)
location: region:144946-145866:-1
so has part: feature:144946-145866:-1:exon
subclass of: SO_0000010

position:144946:-1
position: 144946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145866:-1
position: 145866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144946-145866:-1:exon

RFER_RS00720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00720
old locus tag: Rfer_0142
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018442556.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ
translation: MDQHYNFAFLDERTKKHIRRALLKAVAVPGYQVPFGSREMPFAYGWGTGGVQITASIIGSSDVLKVIDQGSDDTTNAVNIRRFFARTTGVTTTEKTREATLIQTRHRIPEAPLTESQTLVYQVPMPEPLSKLEPRRRETIKMHALSEYGLMHVRLYEDIAQLGAISHAYDYPVMVNERYLMSPSPIPKFDNPKMHMNPALQLFGAGREKRLYAIPPYTPVRSLDFEDHPFEVQRWDHACALCGASESYLDEMIVDDAGSRLFVCSDSDYCEERRDAGQVGTQQAVTLHDALATPSEAVTPSEQEAA
SIO_010081: RFER_RS00720
subclass of: SO_0000673
so part of: RFER_RS00720
location: complement(144946..145866)
location: region:144946-145866:-1
so has part: feature:144946-145866:-1:exon

WP_166485617.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:144946-145866:-1:exon

RFER_RS00725
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00725
old locus tag: Rfer_0143
so part of: sequence
location: complement(145866..147050)
location: region:145866-147050:-1
so has part: feature:145866-147050:-1:exon
subclass of: SO_0000010

position:147050:-1
position: 147050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145866-147050:-1:exon

RFER_RS00725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00725
old locus tag: Rfer_0143
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007587841.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbon-phosphorus lyase complex subunit PhnI
translation: MYVAVKGGAAAIESSWRLLEAQRRGDTAIAELSVAQIRAQLSLAVDRVMSEGSLYDPELAALAIKQASGDLMEAIFLLRAYRTTLPRLGYSEPLDTARIALVRRISATFKEVPGGQLLGPTYDYTQRLLDFALLAEGENTGHSPAASDTAPDCLAKAFTDPLEKYLAIETPSATVPRINELLAREGLLETPQPFDAAPPGDLTRDPLMFPADRALRLQALARGDEGWLLAMGYSTQRGYANSHPFAGEIRRGFVSVELVPDELGFALDIGELEITECQMINQFSGSREVPPQFTQGYGLAFGGAERKAMAMALVDRALRADELGEPRVAPAQDEEFVLSHADNVEASGFVQHLKLPHYVDFQAELELVRKLRAAHAAPARDSASAFNPTQQEAA
SIO_010081: RFER_RS00725
subclass of: SO_0000673
so part of: RFER_RS00725
location: complement(145866..147050)
location: region:145866-147050:-1
so has part: feature:145866-147050:-1:exon

WP_011462476.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:145866-147050:-1:exon

RFER_RS00730
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: phnH
locus tag: RFER_RS00730
old locus tag: Rfer_0144
so part of: sequence
location: complement(147140..147739)
location: region:147140-147739:-1
so has part: feature:147140-147739:-1:exon
subclass of: SO_0000010

position:147140:-1
position: 147140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147739:-1
position: 147739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147140-147739:-1:exon

RFER_RS00730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: phnH
locus tag: RFER_RS00730
old locus tag: Rfer_0144
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013901576.1
GO process: GO:0019634 - organic phosphonate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphonate C-P lyase system protein PhnH
translation: MNGAQTLAPGLLDGVHDSQQAFRAVLDALARPGQVRRIGPALPDVALGGAMARLLLSLSDDETPVWWQRADAGLQHWLRFHTGAGLAERPEAASFAVFTGIHQGFALSDFASGTAAAPEFSSTLLIELPGLADGPALEWRGPGIRDVQCVGLQGLPDDFWAQWQANHAAFPRGVDIVFTCGEDALGLPRTTRVRRLEGV
SIO_010081: RFER_RS00730
subclass of: SO_0000673
so part of: RFER_RS00730
location: complement(147140..147739)
location: region:147140-147739:-1
so has part: feature:147140-147739:-1:exon

WP_011462477.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147140-147739:-1:exon

RFER_RS00735
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: phnG
locus tag: RFER_RS00735
old locus tag: Rfer_0145
so part of: sequence
location: complement(147736..148200)
location: region:147736-148200:-1
so has part: feature:147736-148200:-1:exon
subclass of: SO_0000010

position:147736:-1
position: 147736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148200:-1
position: 148200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147736-148200:-1:exon

RFER_RS00735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: phnG
locus tag: RFER_RS00735
old locus tag: Rfer_0145
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006025334.1
GO process: GO:0019634 - organic phosphonate metabolic process [Evidence IEA]; GO:0015716 - organic phosphonate transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphonate C-P lyase system protein PhnG
translation: MTSNILTSDYPTRLAWLAVLARATLTQLEDMLPAAGELPELKPVRAPEIGMVMLRGRVGGTGNPFNLGEASVVRCAVRLGNGPLGVSYALGRDKRRAELAALFDALLQDPQHHDDLQRDLIAPLALGQAQARAQKQRDGAGSKVEFFTFVRGEA
SIO_010081: RFER_RS00735
subclass of: SO_0000673
so part of: RFER_RS00735
location: complement(147736..148200)
location: region:147736-148200:-1
so has part: feature:147736-148200:-1:exon

WP_011462478.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147736-148200:-1:exon

RFER_RS00740
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: phnF
locus tag: RFER_RS00740
old locus tag: Rfer_0146
so part of: sequence
location: 148533..149291
location: region:148533-149291:1
so has part: feature:148533-149291:1:exon
subclass of: SO_0000010

position:148533:1
position: 148533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149291:1
position: 149291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148533-149291:1:exon

RFER_RS00740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: phnF
locus tag: RFER_RS00740
old locus tag: Rfer_0146
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013901578.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0015716 - organic phosphonate transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphonate metabolism transcriptional regulator PhnF
translation: MTFEQLTTSSPGRRSGVAVWRQIADTLTTEIRDRAYAGTGRLPGEVELSARFAVNRHTLRQAVAALQSEGLLRIEPGRGMFVQHELMDYALSRRTRFSENLLRQGLLPSKQLLTAREMPAPERAARELKLDKGAKVLMVEMLDEANDAPIGLATAYYPALRFAGLLEMLAEGTRTTDILKHFGVQDYVREQSRITTQMPNDETARLLRQPGTRPLLCVECLDVDMDGTPIKYGETVFCGDRVQLVVNAGGTA
SIO_010081: RFER_RS00740
subclass of: SO_0000673
so part of: RFER_RS00740
location: 148533..149291
location: region:148533-149291:1
so has part: feature:148533-149291:1:exon

WP_011462479.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:148533-149291:1:exon

RFER_RS00745
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00745
old locus tag: Rfer_0147
so part of: sequence
location: 149288..149983
location: region:149288-149983:1
so has part: feature:149288-149983:1:exon
subclass of: SO_0000010

position:149288:1
position: 149288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149983:1
position: 149983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149288-149983:1:exon

RFER_RS00745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00745
old locus tag: Rfer_0147
inference: COORDINATES: protein motif:HMM:TIGR03223.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1045 domain-containing protein
translation: MKPRYAVYFAPEQGSPWWEFGSRWLGRDECEDVNKVQHALAEIGPVELREITAQPRRYGFHATLKAPFSLSGSHNAADLTARLRALAATRKPVLLGPMQAVMLGDFVALVPALGSDELMALAAACVTTLDDLRRPLSEADLARRRVEQLDAREQELLQQYGYPYVLECFRFHLTLSGPLARPTAQRVLQAVAAPVAQLNATAPLVLDRLCLFVEPAPGQPFQRMADVALSA
SIO_010081: RFER_RS00745
subclass of: SO_0000673
so part of: RFER_RS00745
location: 149288..149983
location: region:149288-149983:1
so has part: feature:149288-149983:1:exon

WP_011462480.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:149288-149983:1:exon

RFER_RS00750
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00750
old locus tag: Rfer_0148
so part of: sequence
location: 149980..150537
location: region:149980-150537:1
so has part: feature:149980-150537:1:exon
subclass of: SO_0000010

position:149980:1
position: 149980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150537:1
position: 150537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149980-150537:1:exon

RFER_RS00750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00750
old locus tag: Rfer_0148
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: phosphonate metabolism, 1,5-bisphosphokinase (PRPP-forming) PhnN
translation: MSGLWVFVCGPSGAGKDSVMGWAATQLAARQDIVFARRMVTRPALPGSDHDPVTVRQFEHSMAAGGLVWRWEAHGFHYGIEARYAAQVAAGKIVVVNGSRAHASGLDATAQVRVVQIVADAAQLASRLEQRGRDAPHEVSRRLARNALFKDLRADHTILNQGALADAGRQLVDYLVAGALSSAWR
SIO_010081: RFER_RS00750
subclass of: SO_0000673
so part of: RFER_RS00750
location: 149980..150537
location: region:149980-150537:1
so has part: feature:149980-150537:1:exon

WP_011462481.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:149980-150537:1:exon

RFER_RS00755
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00755
old locus tag: Rfer_0149
pseudo: true
so part of: sequence
location: complement(150598..>151044)
location: region:150598-151044:-1
so has part: feature:150598-151044:-1:exon
subclass of: SO_0000010

position:150598:-1
position: 150598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151044:-1
position: 151044
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150598-151044:-1:exon

RFER_RS00755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00755
old locus tag: Rfer_0149
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011462489.1
GO process: GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: nitrilase-related carbon-nitrogen hydrolase
SIO_010081: RFER_RS00755
subclass of: SO_0000673
so part of: RFER_RS00755
location: complement(150598..>151044)
location: region:150598-151044:-1
so has part: feature:150598-151044:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:150598-151044:-1:exon

RFER_RS00760
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00760
old locus tag: Rfer_0150
so part of: sequence
location: complement(151079..152194)
location: region:151079-152194:-1
so has part: feature:151079-152194:-1:exon
subclass of: SO_0000010

position:151079:-1
position: 151079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152194:-1
position: 152194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151079-152194:-1:exon

RFER_RS00760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00760
old locus tag: Rfer_0150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015012471.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA alkylation repair protein
translation: MAEPLKTQFGTEVPVRIAAMISRAWHAFDQDAFLKDALDGYTSLELMPRGRWIAQALHRHLPQDYEVALAVLMDSIGPKLDGTEDFGMASFFYLPHTCFVAAFGLDHFEVSMRAQYELTQRFTAEFSIRPFLERHPQATLSRLKDWASDPSPHVRRLVSEGTRPRLPWALRLRAFQQDPQPVLALLELLKDDPELYVRRSVANSLNDIGKDHPLLLVETARRWLVDAPDERRWLVQHALRSAVKRGEAGALGVLGFGVSAMVSVSGARIAPQRVVMGGAVTIAFDVCNTESRPQRALVDLRVHFVKANGKSSPKVFKLKVLDLQQQTTVRLSKTISLVVMTTRKHYPGVHQVDVVINGTTQALGQFELAHD
SIO_010081: RFER_RS00760
subclass of: SO_0000673
so part of: RFER_RS00760
location: complement(151079..152194)
location: region:151079-152194:-1
so has part: feature:151079-152194:-1:exon

WP_011462483.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:151079-152194:-1:exon

RFER_RS00765
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00765
old locus tag: Rfer_0151
so part of: sequence
location: complement(152208..152966)
location: region:152208-152966:-1
so has part: feature:152208-152966:-1:exon
subclass of: SO_0000010

position:152208:-1
position: 152208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152966:-1
position: 152966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152208-152966:-1:exon

RFER_RS00765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00765
old locus tag: Rfer_0151
inference: COORDINATES: protein motif:HMM:NF024676.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YafY family protein
translation: MTPIRTRCHTANFTSQFSHTVMSKAERLFHLYALLRSRRTAMTAEAIAAVLEVSVRTVYRDVQALSQSGAPIDGEAGVGYLLRPGFDLPPLMFTPEELLALMVGARMVQAFTDPDLARSARQSEQKIRSILTDSLKLNAERQPYRIPILDSDDGLREVHRTLRLACEGRKKVRAVYCDEQQQRTERVLWPLGIIGWTGRWTLLAWCETRSDYRNFRFDRFDAVACLDERFPPRPDVNITHYFETVLGVPDKD
SIO_010081: RFER_RS00765
subclass of: SO_0000673
so part of: RFER_RS00765
location: complement(152208..152966)
location: region:152208-152966:-1
so has part: feature:152208-152966:-1:exon

WP_244095774.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:152208-152966:-1:exon

RFER_RS00770
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00770
old locus tag: Rfer_0152
so part of: sequence
location: complement(152914..153213)
location: region:152914-153213:-1
so has part: feature:152914-153213:-1:exon
subclass of: SO_0000010

position:152914:-1
position: 152914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153213:-1
position: 153213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152914-153213:-1:exon

RFER_RS00770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00770
old locus tag: Rfer_0152
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIKTVEAFTYKLAVGTVPSAFVAANGKVNEWLKKQPGFLKRELSQLEDDSWLDIAHWKSAAEAKQAGEKFMTELSDCECMSMIDPDSNKMSHGELHLAI
SIO_010081: RFER_RS00770
subclass of: SO_0000673
so part of: RFER_RS00770
location: complement(152914..153213)
location: region:152914-153213:-1
so has part: feature:152914-153213:-1:exon

WP_011462485.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:152914-153213:-1:exon

RFER_RS00775
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00775
old locus tag: Rfer_0153
so part of: sequence
location: complement(153291..153851)
location: region:153291-153851:-1
so has part: feature:153291-153851:-1:exon
subclass of: SO_0000010

position:153291:-1
position: 153291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153851:-1
position: 153851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153291-153851:-1:exon

RFER_RS00775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00775
old locus tag: Rfer_0153
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014004149.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1697 domain-containing protein
translation: MRTPPATMHYAAFFRNLNLGRPNAPTKVQLEQAFLDAGAQEAASFLTNGTLVFSVGARRSPDRVLAKASKLLNSVCGLVEPGFLRSVPYLAGLVAADPFATVVDASVYEYCVTFLHPAAEVPATLSLRSRRGDVEVFRFTGTEALSLSRKIGNTAGSPNALLEKQLGLPATTRNWNTVRRLALAHS
SIO_010081: RFER_RS00775
subclass of: SO_0000673
so part of: RFER_RS00775
location: complement(153291..153851)
location: region:153291-153851:-1
so has part: feature:153291-153851:-1:exon

WP_244095775.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:153291-153851:-1:exon

RFER_RS00780
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00780
old locus tag: Rfer_0154
so part of: sequence
location: complement(153968..154474)
location: region:153968-154474:-1
so has part: feature:153968-154474:-1:exon
subclass of: SO_0000010

position:153968:-1
position: 153968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:154474:-1
position: 154474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153968-154474:-1:exon

RFER_RS00780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00780
old locus tag: Rfer_0154
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013123635.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DinB family protein
translation: MSQKILSSLFAQKSWANRELFDVLASMTSTDQAASLHTAIRTLNHIYVVDRIFRAHLAGEKHPYTATNTPETPALGELHIAVAETDLWFEDYASKITGQALAESLSFQFTDGDSGSMTREEMLFHVLTHGSYHRGNVGQILKGISVAPPRDLYTKFLHVHEPARREAE
SIO_010081: RFER_RS00780
subclass of: SO_0000673
so part of: RFER_RS00780
location: complement(153968..154474)
location: region:153968-154474:-1
so has part: feature:153968-154474:-1:exon

WP_011462487.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:153968-154474:-1:exon

RFER_RS00785
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00785
old locus tag: Rfer_0155
so part of: sequence
location: complement(154779..155309)
location: region:154779-155309:-1
so has part: feature:154779-155309:-1:exon
subclass of: SO_0000010

position:154779:-1
position: 154779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155309:-1
position: 155309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154779-155309:-1:exon

RFER_RS00785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00785
old locus tag: Rfer_0155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011462489.1
GO process: GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrilase-related carbon-nitrogen hydrolase
translation: MHRTVESCGERGQAQAFGGILGMAICNDRRWAETYRVMGLQGVEMVLIGYNTPVHNAPAPEHDDLSLFHNQLSMQAGAYQNGTWVVGVAKAGVEEGVDSIAGSCIIAQSGEVVARCLSKGDEVAIARCDLDFCAVYKRSTFNFDLHRQPQAYGLITERKGETLAADGTLWAASSGV
SIO_010081: RFER_RS00785
subclass of: SO_0000673
so part of: RFER_RS00785
location: complement(154779..155309)
location: region:154779-155309:-1
so has part: feature:154779-155309:-1:exon

WP_279587686.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:154779-155309:-1:exon

RFER_RS00790
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00790
old locus tag: Rfer_0156
so part of: sequence
location: complement(155317..156291)
location: region:155317-156291:-1
so has part: feature:155317-156291:-1:exon
subclass of: SO_0000010

position:155317:-1
position: 155317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156291:-1
position: 156291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155317-156291:-1:exon

RFER_RS00790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00790
old locus tag: Rfer_0156
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNLLPPFDSSALSRLAERTEYETWFLEAVYTLVEQELFPTWPDAVVYPVDKSKAQFLAYLRGNIILGDWRSGFLNAGAPLVFVSTFKLLDMLIEWILEENGIPPTFRFQQKLQNLKSSLIFPQFIESRPWLKERLTGLYSTLEPLRGTIIHDRHFTATDGAVRVSSSRKGIIGSAIDISATQLRKLTVTIMSVLRYVDGTWQLDEFREKILRHELDELVTLHGLPLIGQKLPFHTCVRVYLKGSDPFDVDPMVIRRDIATRYVDQDCSFDLRVLMVKGHEVVDAYLFPWTLVATARSDWHQGIDAQHFRTTIPEDIKPDHFDTG
SIO_010081: RFER_RS00790
subclass of: SO_0000673
so part of: RFER_RS00790
location: complement(155317..156291)
location: region:155317-156291:-1
so has part: feature:155317-156291:-1:exon

WP_244095776.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:155317-156291:-1:exon

RFER_RS23810
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS23810
so part of: sequence
location: complement(156383..156586)
location: region:156383-156586:-1
so has part: feature:156383-156586:-1:exon
subclass of: SO_0000010

position:156383:-1
position: 156383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156586:-1
position: 156586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156383-156586:-1:exon

RFER_RS23810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS23810
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNDPAVVGLADRVSVLWPTLAGGRSGYASVLVSTRLQVCQRCGHREWGRRTDTQSTSRVAVWVEPRL
SIO_010081: RFER_RS23810
subclass of: SO_0000673
so part of: RFER_RS23810
location: complement(156383..156586)
location: region:156383-156586:-1
so has part: feature:156383-156586:-1:exon

WP_166485618.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:156383-156586:-1:exon

RFER_RS00795
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00795
old locus tag: Rfer_0157
so part of: sequence
location: complement(156648..157613)
location: region:156648-157613:-1
so has part: feature:156648-157613:-1:exon
subclass of: SO_0000010

position:156648:-1
position: 156648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157613:-1
position: 157613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156648-157613:-1:exon

RFER_RS00795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00795
old locus tag: Rfer_0157
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005799762.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N-carbamoyl-D-amino-acid hydrolase
translation: MPRYLNVALGQLGPIQRADSRTQVVARLCELMRQAHAVGAQLIVFPELALTTFFPRWYIEDEAEINSFFEQSMPNAATQPLFDLSKALGVGFYLGYAELAQEATGAVRYNTSILVDRSGQIVAKYRKVHLPGHKEHEPWRRFQHLEKRYFTAGDGWEVTQAFGGVVGMAICNDRRWAETYRVMGLQGVEMVLIGYNTPVHNAPAPEHDDLSLFHNQLSMQAGAYQNGTWVVGVAKAGVEEGVDSIGGSCIIAPSGEVVARCLTKGDEMAIARCDLDFCAIYKRTTFNFDLHRQPQAYGLITQRKGETLGADGTVWAAPSGV
SIO_010081: RFER_RS00795
subclass of: SO_0000673
so part of: RFER_RS00795
location: complement(156648..157613)
location: region:156648-157613:-1
so has part: feature:156648-157613:-1:exon

WP_011462489.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:156648-157613:-1:exon

RFER_RS00800
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00800
old locus tag: Rfer_0158
so part of: sequence
location: complement(157597..158868)
location: region:157597-158868:-1
so has part: feature:157597-158868:-1:exon
subclass of: SO_0000010

position:157597:-1
position: 157597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158868:-1
position: 158868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157597-158868:-1:exon

RFER_RS00800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00800
old locus tag: Rfer_0158
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011482445.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Zn-dependent hydrolase
translation: MTSPQINAGRLLASLHALGQIGALPGGGVNRLALSDADREGRDWTVARMRELSMRVDIDAIGNIVGTFPGTEDLPPVMVGSHIDTVRTGGLYDGNYGVLSGLEVVTALREAGVQPRRPLAVAVFTNEEGARFQPDMMGSLVYVGGLPLPDALATCDADGVSVQAELQRIGYQGTAPVGAPLVDSYVELHIEQGPVLEQLGLQIGVVEGVQGISWTEFTVEGQSNHAGTTPMALRHDAALVAAQVAVFMRALSARLGGRQLATVGAVRLSPNLVNVIAQKAVFTVDLRNTDSAALAQAESDLHAYAQQAAQAEGVRITSRTLARFEPVAFDPMVVNLVEQQTQALGCTYQRMPSGAGHDAQMLARVCPSAMVFVPSVGGLSHNVREHTAPADLQRGAQVLLQVVLALANRPSQLLPLNFYAPLP
SIO_010081: RFER_RS00800
subclass of: SO_0000673
so part of: RFER_RS00800
location: complement(157597..158868)
location: region:157597-158868:-1
so has part: feature:157597-158868:-1:exon

WP_011462490.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:157597-158868:-1:exon

RFER_RS00805
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00805
old locus tag: Rfer_0159
so part of: sequence
location: complement(158865..160097)
location: region:158865-160097:-1
so has part: feature:158865-160097:-1:exon
subclass of: SO_0000010

position:158865:-1
position: 158865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160097:-1
position: 160097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158865-160097:-1:exon

RFER_RS00805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00805
old locus tag: Rfer_0159
EC number: 4.3.1.15
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011482446.1
GO function: GO:0008838 - diaminopropionate ammonia-lyase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: diaminopropionate ammonia-lyase
translation: MPQLAKHPFTLLPNARFQQAEPYGAHRSTLLSASALAQAQTVITSWPGYTVTRLCSLPVLARTAGVASIHYKDEATRFGLGSFKGLGGAYAVARLLCRELGQRLGRPVSHADLQSDPALRQACGDITVTCATDGNHGRSVAWGAQMLGCRCVIYIHATVSEGRKDAIARYGAQVVRTAGNYDDSVQQADRDAKTNGWFVISDTSYPGYMDIPRDVMQGYQLMVHEAVSALPQWPTHVFVQAGVGGFAAAVCAYFWERSAEQRPVFVVVEPERADCLLQSARAGAVVAVKGDLDTLMAGLACGEVSLLAWDILATGANAFCTIPDAAAVDTMRLLASPQGGDPVIVAGESAVAGLAAALLAAHDSTARASLGLGVESRVLLFGSEGDTDPALYQQLVGRSAAQVLQDGASV
SIO_010081: RFER_RS00805
subclass of: SO_0000673
so part of: RFER_RS00805
location: complement(158865..160097)
location: region:158865-160097:-1
so has part: feature:158865-160097:-1:exon

WP_011462491.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:158865-160097:-1:exon

RFER_RS00810
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00810
old locus tag: Rfer_0160
so part of: sequence
location: complement(160112..160963)
location: region:160112-160963:-1
so has part: feature:160112-160963:-1:exon
subclass of: SO_0000010

position:160112:-1
position: 160112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160963:-1
position: 160963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160112-160963:-1:exon

RFER_RS00810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00810
old locus tag: Rfer_0160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011482447.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MurR/RpiR family transcriptional regulator
translation: MTQIITLRERIQAHYEALSLVDRKLADVVLVHEKDLLAYSATELAALAGVSKASTARFFKRLGFADFLAFRQHQRKSAPQPSPLGRVAQQGLRANPLQQHVAQDAQQLQALADAVTDQSVQQAAKLLAGARRVWVVGYRNGYMTASYARALLSQVRAEVHLLNEGAGEDAELLAEIQRGDVLLAMDFRRRTRRLSQVVGIACDAGAALVLVSDARVSTLAARAQALFICPPQGEAIFDSYVGVISLINYLATATLAHLPQKARARMAAIEQVHAQLDDLEPSL
SIO_010081: RFER_RS00810
subclass of: SO_0000673
so part of: RFER_RS00810
location: complement(160112..160963)
location: region:160112-160963:-1
so has part: feature:160112-160963:-1:exon

WP_011462492.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160112-160963:-1:exon

RFER_RS00815
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00815
old locus tag: Rfer_0161
so part of: sequence
location: 161181..161978
location: region:161181-161978:1
so has part: feature:161181-161978:1:exon
subclass of: SO_0000010

position:161181:1
position: 161181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161978:1
position: 161978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161181-161978:1:exon

RFER_RS00815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00815
old locus tag: Rfer_0161
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011482448.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transporter substrate-binding domain-containing protein
translation: MKFKLLSTLAGVFASAVLSLATPAHAADDSLSSILAKKSIALGVASDFPPYGYMGPDFKLTGVDVATAQLIADKLGVKAELVPVSTPNRIPYLQTKKIDLIVSALGKNPEREKVIDFTVAYAPFFQAVFGPKALSIKSFDDLAGKSIAVTRGTIQDDVLQKVAPPTLKIQRFEDDATTVAAFISQQTQLLATGAAVAAAAVQKNPQVQAEYKLLLKDSPNFIGVRKGETALMTKVNEILLAAKADGTLEKYSQKWLGRGTGVLPE
SIO_010081: RFER_RS00815
subclass of: SO_0000673
so part of: RFER_RS00815
location: 161181..161978
location: region:161181-161978:1
so has part: feature:161181-161978:1:exon

WP_011462493.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:161181-161978:1:exon

RFER_RS00820
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00820
old locus tag: Rfer_0162
so part of: sequence
location: 162015..162677
location: region:162015-162677:1
so has part: feature:162015-162677:1:exon
subclass of: SO_0000010

position:162015:1
position: 162015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162677:1
position: 162677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162015-162677:1:exon

RFER_RS00820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00820
old locus tag: Rfer_0162
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011482449.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO process: GO:0006865 - amino acid transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amino acid ABC transporter permease
translation: MIEFNFGTVLAQWPMLLRGLGLTVTLTAFSALLGTLAGTACAWARLHGGPMLKRVVGAYVELVRNTPFIIQLFFIFFGLPSLGLRLSVEMASVLAMVLNLGAYACEIVRAGLQTTPRGQLEAAMSLALTPWQTFSRVVLPPALARIWPALVSQIIIVMLGSAVCGQISAEELSQAANLISSRTFRSFESYIIVTGIYLLLAIALRQLLYWVGPRFIFSSR
SIO_010081: RFER_RS00820
subclass of: SO_0000673
so part of: RFER_RS00820
location: 162015..162677
location: region:162015-162677:1
so has part: feature:162015-162677:1:exon

WP_011462494.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:162015-162677:1:exon

RFER_RS00825
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00825
old locus tag: Rfer_0163
so part of: sequence
location: 162688..163332
location: region:162688-163332:1
so has part: feature:162688-163332:1:exon
subclass of: SO_0000010

position:162688:1
position: 162688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163332:1
position: 163332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162688-163332:1:exon

RFER_RS00825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00825
old locus tag: Rfer_0163
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005799479.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO process: GO:0006865 - amino acid transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amino acid ABC transporter permease
translation: MVQFSLWDIFTFLLGALRWTAALSLIAFIGGGLVGLGLLMLRFAKLRGAATAVAWYVQIFQGTPLLMQLFLVYFGLALLGMDTSPLVAAAICLTLYASAYLTEIWRGCVNAIPKGQWEASTSLALNFTQQMRHVILPQALHVAIAPTVGFLVQIIKGTALASVIGFVELTKAGQMISNATYQPFLAYIFVGLLYFALCYPLSWWSQRLENRRLA
SIO_010081: RFER_RS00825
subclass of: SO_0000673
so part of: RFER_RS00825
location: 162688..163332
location: region:162688-163332:1
so has part: feature:162688-163332:1:exon

WP_011462495.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:162688-163332:1:exon

RFER_RS00830
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00830
old locus tag: Rfer_0164
so part of: sequence
location: 163336..164094
location: region:163336-164094:1
so has part: feature:163336-164094:1:exon
subclass of: SO_0000010

position:163336:1
position: 163336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164094:1
position: 164094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163336-164094:1:exon

RFER_RS00830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00830
old locus tag: Rfer_0164
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011482451.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amino acid ABC transporter ATP-binding protein
translation: MTTSPNSPFALVDIRGLHKSFGATEVLKGIDLQVGRKEVVSIIGKSGSGKSTLLRCINGLETFERGTLTVDGQALQHGDANAMRELRQQVGMIFQSFNLFPHLSAGRNVMLAPTLVKDLPKEEAKARAQALLERVGLGSLFDRMPDQLSGGQQQRVAIARALAMAPTVLLCDEITSALDPELVGEVLQVVEMLAVDGMTLILVTHEMAFARKVSDRVVFMHQGLIHEAGTPDEIFNRPQTPELRQFLSALRD
SIO_010081: RFER_RS00830
subclass of: SO_0000673
so part of: RFER_RS00830
location: 163336..164094
location: region:163336-164094:1
so has part: feature:163336-164094:1:exon

WP_011462496.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:163336-164094:1:exon

RFER_RS00835
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: uraD
locus tag: RFER_RS00835
old locus tag: Rfer_0165
so part of: sequence
location: 164145..165929
location: region:164145-165929:1
so has part: feature:164145-165929:1:exon
subclass of: SO_0000010

position:164145:1
position: 164145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165929:1
position: 165929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164145-165929:1:exon

RFER_RS00835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: uraD
locus tag: RFER_RS00835
old locus tag: Rfer_0165
EC number: 4.1.1.97
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019425505.1
GO process: GO:0019628 - urate catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase
translation: MATPPLTLDQLNAASLDDARAMVAGLYEHSPWIARAALQQRPFRSLAQFKYALCQVATNAGKDAQLALLRAHPELAGRALADKSLTVESTHEPNKAGLTHCTPAEFEKIQQLNSDYNARFGFPFILALRGPRGLGLQKAEIMATFERRLQSHPDHEFQEGLRNVHRMAEIRLNDRFGRSIERGNLVWDWQEALAQYSDPGYAELGQLTVTYLTDAHRACAQRISNNMREAGCDKVHIDAVGNVVGRYKGTGASPKALMTGSHYDTVRNGGKYDGRLGIFVPLACVQGLKRANKRLPFDLEIIAFAEEEGQRYKATFLGSGALTGDFKPDWLDQVDADGISMRQAMKQAGLCIDDIPKLKRIASDYMGFVEVHIEQGPVLSELNLPLGIVTSINASVRHTGEMLGMTSHAGTTPMDRRRDAAAGVAELMLYVESRAAADSDSVGTVGILNVPGGSINVVPGRCQFSLDLRAPTDAQRDAMASDVLARIEQIAKARGLHYHLTETLRASAAPSAPAWQQRWEAAVAALGLPLHRMPSGAGHDAMKLHDLLPQAMLFVRGENAGISHNPLESTSSDDMQLAVQAFEHLLNSLAQELS
SIO_010081: RFER_RS00835
subclass of: SO_0000673
so part of: RFER_RS00835
location: 164145..165929
location: region:164145-165929:1
so has part: feature:164145-165929:1:exon

WP_011462497.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:164145-165929:1:exon

RFER_RS00840
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00840
old locus tag: Rfer_0166
so part of: sequence
location: 165970..167193
location: region:165970-167193:1
so has part: feature:165970-167193:1:exon
subclass of: SO_0000010

position:165970:1
position: 165970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167193:1
position: 167193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165970-167193:1:exon

RFER_RS00840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00840
old locus tag: Rfer_0166
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019655078.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ArgE/DapE family deacylase
translation: MNHHEQLDAWIDTHFDEQVKFLQQLIQVPTDTPPGNNTPHAERAADLLDAMGLTTERHAVPHELVKAAGLQTITNLVVRRQYGVGRTIALNAHGDVVPPGEGWVHGPYGGEIENGKIYGRAAAVSKCDFSTYAFAVRALESLGIALHGNVELLFTYDEEFGGEVGPAWLLQNKLTKPDLMIAAGFSYQVVTAHNGCLQMQVTVHGKMAHAAIPETGIDALQGANKILTALYAQNTLYEQITSNVAGIKHPYLNVGSIEGGTNTNVVPARVTLKLDRRMIPEETPAEVEANIRQVIADAAALTPGITVEVKRILLANALKPLPGNKPLVQVLQKHASEVFGETIPVLGTPLYTDVRIFCEAGIPGVIYGAGPRTVLESNAKRADENLDLQDLRRATKVIARSLLDLLS
SIO_010081: RFER_RS00840
subclass of: SO_0000673
so part of: RFER_RS00840
location: 165970..167193
location: region:165970-167193:1
so has part: feature:165970-167193:1:exon

WP_011462498.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:165970-167193:1:exon

RFER_RS00845
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00845
old locus tag: Rfer_0167
so part of: sequence
location: 167332..167970
location: region:167332-167970:1
so has part: feature:167332-167970:1:exon
subclass of: SO_0000010

position:167332:1
position: 167332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167970:1
position: 167970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167332-167970:1:exon

RFER_RS00845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00845
old locus tag: Rfer_0167
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015012134.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MBL fold metallo-hydrolase
translation: MLRYLTVPVTPYQQNCSLLWCDQTMKTAVLDPGGDLERVLAQVARAGLVLDQIWLTHGHIDHAGGAAELALRFGLPIIGPHQADQFLIDGLALQGKMFGFAHVQTFTPTRWLNDGDTVKLGHSTLTVRHCPGHTPGHVVFYSSEANRAFVGDVLFAGSIGRTDLPQGDHDTLIASITQRLWPMGNDTVFVPGHGPESTFGIERRSNPYVRDT
SIO_010081: RFER_RS00845
subclass of: SO_0000673
so part of: RFER_RS00845
location: 167332..167970
location: region:167332-167970:1
so has part: feature:167332-167970:1:exon

WP_011462499.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:167332-167970:1:exon

RFER_RS00850
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00850
old locus tag: Rfer_0168
so part of: sequence
location: 168082..169398
location: region:168082-169398:1
so has part: feature:168082-169398:1:exon
subclass of: SO_0000010

position:168082:1
position: 168082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169398:1
position: 169398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168082-169398:1:exon

RFER_RS00850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00850
old locus tag: Rfer_0168
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005666707.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKNRTSLHQLPQQNIFHKDDVFVLFGELFGRGYANGLVNEARKAGMQIVGITVGRRDADNVLRPLNDQELAAAEAGLGGKIINVPLMAGFDLDAPAGEPTPTDLLGSMTLKTWMDDKLDWAHIEKCREVGIRRFRDSVAEVMTLLNGMVPDGRNVFFAHTMAGGIPKAKVFLAIANRVYKGRGDRFMSSQVLLESDLGKLILKNFDEVSANTFQHLIDASQTIRARVETSGGQVRYSAYGYHGTEVLIDDSYEWQTYTNYTQGRAKMRLECIAQAAWSHNIKATVYNCPEIRTNSSDIFAGVELPLILLLNALKKEGGGAWAEAQWQACRELLLEGVTLEDVLQKVADFQGSEVMQGFRDFAAWPMPNSPAQADLTIGTSDEILKMHKDNKALITDLLSSFVIEATGPLIFRESSAPAGPVLWLNHDIIARQLNQLHA
SIO_010081: RFER_RS00850
subclass of: SO_0000673
so part of: RFER_RS00850
location: 168082..169398
location: region:168082-169398:1
so has part: feature:168082-169398:1:exon

WP_011462500.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:168082-169398:1:exon

RFER_RS00855
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00855
old locus tag: Rfer_0169
so part of: sequence
location: 169851..170921
location: region:169851-170921:1
so has part: feature:169851-170921:1:exon
subclass of: SO_0000010

position:169851:1
position: 169851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170921:1
position: 170921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169851-170921:1:exon

RFER_RS00855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00855
old locus tag: Rfer_0169
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010458709.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HlyD family secretion protein
translation: MKTNLKTAITSALLLAAAAAALLGWGPWREQGLGEGFVSGNGRIEATEIAIATKLAGRVERILVAEGEFVKAGQPLAQMQIESLQAQREEALARLQQAQQAVSGAEVQVAQQEANYQATLAVVAQRESDLDTAQRRLPRSEKLAQEGFFSSQLLDDDRAKVRSLQASVSAAKSQAKAAQVGISAARNQISGAQANVRALEATLARIDVELADSELKSPRDGRVQFLVAQPGEVLGGGGRVLNLVDLSDVYMTFFLPETVAGRVALGSDVRIVLDAAPQFVIPAKVSFVASTAQFTPKTVETASERQKLMFRVRAQIDPGLLQRHLEQVKTGLPGVAWLKLDSKAQWPSHLTVKAEP
SIO_010081: RFER_RS00855
subclass of: SO_0000673
so part of: RFER_RS00855
location: 169851..170921
location: region:169851-170921:1
so has part: feature:169851-170921:1:exon

WP_011462501.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:169851-170921:1:exon

RFER_RS00860
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: rbbA
locus tag: RFER_RS00860
old locus tag: Rfer_0170
so part of: sequence
location: 170945..173710
location: region:170945-173710:1
so has part: feature:170945-173710:1:exon
subclass of: SO_0000010

position:170945:1
position: 170945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173710:1
position: 173710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170945-173710:1:exon

RFER_RS00860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: rbbA
locus tag: RFER_RS00860
old locus tag: Rfer_0170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016453978.1
GO component: GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome-associated ATPase/putative transporter RbbA
translation: MARLQGVTLRYKKNTALNDVTLDIPAGCMVGLIGPDGVGKSSLLALVAGARAVQLGRVEVLGGDMARRLHRQAVCPNIAFMPQGLGKNLYPTLSVEENLQFFARLFGHDVSERRRRIDGLTRSTGLHPFLARPVGKLSGGMKQKLGLCCALIHDPDLLILDEPTTGVDPLARAQFWELITRIRGQHPGMSVVVATAYMEEAQRFDWLVAMDDGRVLDTGTPTELLARTGHSTLESAFIAMLPEEKRRGHQRVEIVPLTLDDQAEVAIEARDLTMRFGDFVAVDHVSFRIQRGEIFGFIGSNGCGKSTTMKMLTGLLPASEGQAWLFGKLVDSRDMATRSRVGYMSQSFSLYGELTVQQNLALHARLFHVPDADLLSRVAESLARFGLREVQDALPEQLPLGMRQRLSLAVATVHKPELLILDEPTSGVDPIARDNFWRLMIELARRDKVTIFISTHFMNEAERCDRISLMHAGQVLESASPAQIMAKRGAATLEDAFIGYLKDADGDAVDDTTGAPLSTETPAVVPAPDPVGAALGQTPAKGLAARLRRSLARIYSYQWRESLELQRDPVRGALALLGSLLLMFVMGYGISMDVGNLRFAVLDRDQTTLSRDYTLNLAGSRYFVERPPITDYAELDRRMRSGELSLALEIPPGFARDVARGQSVQIGAWIDGAMPQRAETVIGYAQGMHQQWYAQQVRDQTGITPSSLISVETRYRYNPDVRSLPAMVPAVIPLLLLMLPAMLTALAVVREKELGSIINLYVTPVTRTEFLIGKQLPYLMLAMFNYGLMCLAAVTVFGVPMTGSFATLTLAALIFSVCSTGMGLLASTVTRSQIAAMFFAMVGTMLPAVQFAGLINPVSSLEGSGRWIGEIYPASHMLTISRGVFSKALGFADLQASFWPMLVAVPVIMGLAIVLLKKQEA
SIO_010081: RFER_RS00860
subclass of: SO_0000673
so part of: RFER_RS00860
location: 170945..173710
location: region:170945-173710:1
so has part: feature:170945-173710:1:exon

WP_279587687.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:170945-173710:1:exon

RFER_RS00865
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00865
old locus tag: Rfer_0171
so part of: sequence
location: 173712..174839
location: region:173712-174839:1
so has part: feature:173712-174839:1:exon
subclass of: SO_0000010

position:173712:1
position: 173712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174839:1
position: 174839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173712-174839:1:exon

RFER_RS00865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00865
old locus tag: Rfer_0171
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019044259.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MRHHLANIYRLGIKELWSLWRDPMMLFLIVYTFTVAIYTAGTAMPETMHRAPIAVVDEDDSVLSARITAAFYPPQFTPPTRITLSEVDPGLDSGRYTFVLNIPPNFQRDVLGGHAPQLQLNIDATRMSQAFAGNGAIQQIVMGEVNEFVQGYRGTTPMPVELATRARFNPALQPSWFGSLMEVINNITMLSIILTGAALIREREHGTVEHLLVMPVTPLEIMLAKVWSMALVVLLAAVVSLTVVIQGVLKVPIEGSIALFLIGATLHLFATTSMGIFMATLARSMPQFGLLMMLTMMPLQMLSGGMTPRESMPVWVQQVMSLAPTTHFTELSQAILYRGAGLAVVWTSFAALLLIGSALFALSLARFRKTISQMA
SIO_010081: RFER_RS00865
subclass of: SO_0000673
so part of: RFER_RS00865
location: 173712..174839
location: region:173712-174839:1
so has part: feature:173712-174839:1:exon

WP_011462503.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:173712-174839:1:exon

RFER_RS23815
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS23815
so part of: sequence
location: complement(174867..175037)
location: region:174867-175037:-1
so has part: feature:174867-175037:-1:exon
subclass of: SO_0000010

position:174867:-1
position: 174867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175037:-1
position: 175037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174867-175037:-1:exon

RFER_RS23815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS23815
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSANIKSLAIVITFAFLAAVKLRRESGVLHSLFCVYCVGLWQAGFAIALPKINACC
SIO_010081: RFER_RS23815
subclass of: SO_0000673
so part of: RFER_RS23815
location: complement(174867..175037)
location: region:174867-175037:-1
so has part: feature:174867-175037:-1:exon

WP_166485619.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:174867-175037:-1:exon

RFER_RS00870
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00870
old locus tag: Rfer_0172
so part of: sequence
location: 175024..175545
location: region:175024-175545:1
so has part: feature:175024-175545:1:exon
subclass of: SO_0000010

position:175024:1
position: 175024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175545:1
position: 175545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175024-175545:1:exon

RFER_RS00870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00870
old locus tag: Rfer_0172
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLALKPPFERVAARHRGLLYGAAFVSALLLAGCAVEVENRQAAQEVARLSKPPGSVYIGWRVFQGRCALCHGFVATGTAGAPDLLPIVREMGAHQFVSLVLKRYDWNLPAAQAGSEGAAREALVEDIVQRKEQYMLTMPAWQGEPVASAHIMDLYAYLSARAQGTQGPGRPAQ
SIO_010081: RFER_RS00870
subclass of: SO_0000673
so part of: RFER_RS00870
location: 175024..175545
location: region:175024-175545:1
so has part: feature:175024-175545:1:exon

WP_041789974.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:175024-175545:1:exon

RFER_RS00875
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00875
old locus tag: Rfer_0173
so part of: sequence
location: 175699..176055
location: region:175699-176055:1
so has part: feature:175699-176055:1:exon
subclass of: SO_0000010

position:175699:1
position: 175699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176055:1
position: 176055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175699-176055:1:exon

RFER_RS00875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00875
old locus tag: Rfer_0173
inference: COORDINATES: protein motif:HMM:NF021119.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: spore germination protein GerW family protein
translation: MADIDNLFGKAISEIERMLNTKTVVGEPITVEGNTLIPLISVGFGFGVGAGEGTDPKKGGGTGTGGGAAGGGGVKPVALIIINKDGVRVEPVKGGAASLLDKIADVAGKFAPNKPTAA
SIO_010081: RFER_RS00875
subclass of: SO_0000673
so part of: RFER_RS00875
location: 175699..176055
location: region:175699-176055:1
so has part: feature:175699-176055:1:exon

WP_011462505.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:175699-176055:1:exon

RFER_RS00880
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00880
old locus tag: Rfer_0174
so part of: sequence
location: 176077..176676
location: region:176077-176676:1
so has part: feature:176077-176676:1:exon
subclass of: SO_0000010

position:176077:1
position: 176077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176676:1
position: 176676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176077-176676:1:exon

RFER_RS00880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00880
old locus tag: Rfer_0174
inference: COORDINATES: protein motif:HMM:NF022615.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2953 domain-containing protein
translation: MPVILAIIVGLPLLLLALPIDLAFRVEGIETFNGQIAIRWMFGLVRFRVRIPGVNKSSRAPKVAPQATKVRVKPDKRSGRPNVLAVLRQAAFRRRVYRLATDLVRAAHLHRLHLRMRLGLGDPADTGRLWALVGPLNAVAQNLRNADVQIEAEYLDPVFEFQARGRLLLVPLQFLILAIGFALSPASIRAWRTLKGRHA
SIO_010081: RFER_RS00880
subclass of: SO_0000673
so part of: RFER_RS00880
location: 176077..176676
location: region:176077-176676:1
so has part: feature:176077-176676:1:exon

WP_166485620.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:176077-176676:1:exon

RFER_RS00885
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00885
old locus tag: Rfer_0175
so part of: sequence
location: 176699..176950
location: region:176699-176950:1
so has part: feature:176699-176950:1:exon
subclass of: SO_0000010

position:176699:1
position: 176699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176950:1
position: 176950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176699-176950:1:exon

RFER_RS00885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00885
old locus tag: Rfer_0175
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRAGTPVTHGAVMLLPIERVVLHSGRGDDRGSTRVWFSAIKEPYALIVRDAGGLWAIDTDAAAVSLEALRQRVPELDTVLAAM
SIO_010081: RFER_RS00885
subclass of: SO_0000673
so part of: RFER_RS00885
location: 176699..176950
location: region:176699-176950:1
so has part: feature:176699-176950:1:exon

WP_166485621.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:176699-176950:1:exon

RFER_RS24785
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS24785
old locus tag: Rfer_0176
so part of: sequence
location: 176947..177093
location: region:176947-177093:1
so has part: feature:176947-177093:1:exon
subclass of: SO_0000010

position:176947:1
position: 176947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177093:1
position: 177093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176947-177093:1:exon

RFER_RS24785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS24785
old locus tag: Rfer_0176
inference: COORDINATES: protein motif:HMM:NF013522.2
GO function: GO:0016853 - isomerase activity [Evidence IEA]
GO process: GO:0006725 - cellular aromatic compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tautomerase family protein
translation: MSFSGLRRRDRPLVEATGTPMVNMRVWIHDVPKESWGIAGVSAENLGR
SIO_010081: RFER_RS24785
subclass of: SO_0000673
so part of: RFER_RS24785
location: 176947..177093
location: region:176947-177093:1
so has part: feature:176947-177093:1:exon

WP_279587688.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:176947-177093:1:exon

RFER_RS00890
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00890
old locus tag: Rfer_0177
so part of: sequence
location: 177400..177918
location: region:177400-177918:1
so has part: feature:177400-177918:1:exon
subclass of: SO_0000010

position:177400:1
position: 177400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177918:1
position: 177918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177400-177918:1:exon

RFER_RS00890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00890
old locus tag: Rfer_0177
inference: COORDINATES: protein motif:HMM:NF025052.2
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MTNSQTVHLIYGATAAGKSTYAKALATEKNAVRFAIDDWMHSLYGQDKPEAMSMEWVMSRVARCQSRIWTTCLQILATGTDVVLELGLLREQVRDRMQAMVEEAGHQASFSFVDADLQVRKQRVLHRNMEKGDTYSFNVTPAMFDAMERYFERPSQAELGRSLVIAEDIKHG
SIO_010081: RFER_RS00890
subclass of: SO_0000673
so part of: RFER_RS00890
location: 177400..177918
location: region:177400-177918:1
so has part: feature:177400-177918:1:exon

WP_011462508.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:177400-177918:1:exon

RFER_RS00895
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00895
old locus tag: Rfer_0178
so part of: sequence
location: 177911..178387
location: region:177911-178387:1
so has part: feature:177911-178387:1:exon
subclass of: SO_0000010

position:177911:1
position: 177911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178387:1
position: 178387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177911-178387:1:exon

RFER_RS00895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00895
old locus tag: Rfer_0178
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017877731.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MarR family transcriptional regulator
translation: MGKPTNVKFTTKNSSESLEFCLRLTRAYATLTRRLDNALSNLHGLSFSDFMILYYLDRAPDSRLRRIDLAERLGVTASGVTRSLLPMEKLGLVSRQPDPRDARVGYASLTDAGQQLLKYALASIEPIAKEAIQKVPAEQIGPFLLVLGELAGINLSNN
SIO_010081: RFER_RS00895
subclass of: SO_0000673
so part of: RFER_RS00895
location: 177911..178387
location: region:177911-178387:1
so has part: feature:177911-178387:1:exon

WP_011462509.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:177911-178387:1:exon

RFER_RS00900
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00900
old locus tag: Rfer_0179
so part of: sequence
location: 178617..178910
location: region:178617-178910:1
so has part: feature:178617-178910:1:exon
subclass of: SO_0000010

position:178617:1
position: 178617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178910:1
position: 178910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178617-178910:1:exon

RFER_RS00900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00900
old locus tag: Rfer_0179
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006683276.1
GO function: GO:0003729 - mRNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system HicA family toxin
translation: MLALSKDNAIILPMNSKHRKTLEALLADPVNGNIEWARIEALLVALGCRVIEGPGSAVTFEHNGRRANFHRPHPAKEALRYRVKAAREFIEKIGAST
SIO_010081: RFER_RS00900
subclass of: SO_0000673
so part of: RFER_RS00900
location: 178617..178910
location: region:178617-178910:1
so has part: feature:178617-178910:1:exon

WP_011462510.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:178617-178910:1:exon

RFER_RS00905
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00905
old locus tag: Rfer_0180
so part of: sequence
location: 178907..179242
location: region:178907-179242:1
so has part: feature:178907-179242:1:exon
subclass of: SO_0000010

position:178907:1
position: 178907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179242:1
position: 179242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178907-179242:1:exon

RFER_RS00905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00905
old locus tag: Rfer_0180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018443951.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system HicB family antitoxin
translation: MNKMTYKGYTAQMEFDTEDKIIVGRVIDIDDIITFHGASVVEFEKAMQTAIDGYLFACEQLGQSAEKPASGRLMLRIDPAVHAAAAKASARSGQSLNKWAEKALNQAAHAG
SIO_010081: RFER_RS00905
subclass of: SO_0000673
so part of: RFER_RS00905
location: 178907..179242
location: region:178907-179242:1
so has part: feature:178907-179242:1:exon

WP_011462511.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:178907-179242:1:exon

RFER_RS00910
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00910
old locus tag: Rfer_0181
so part of: sequence
location: complement(179328..180770)
location: region:179328-180770:-1
so has part: feature:179328-180770:-1:exon
subclass of: SO_0000010

position:179328:-1
position: 179328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180770:-1
position: 180770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179328-180770:-1:exon

RFER_RS00910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00910
old locus tag: Rfer_0181
EC number: 1.8.1.4
inference: COORDINATES: protein motif:HMM:NF004939.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dihydrolipoyl dehydrogenase
translation: MKPIHVNVAVIGAGTAGMGAYRAARAHTDSVLLIEGDVYGTTCARVGCMPSKLLIAAAEAAHQARHTEAFGVQVKDITIDGAAVMARVQRERNRFVGFVLETVEAIPPCDRLKAKVSFQDANTLVTEHGQLIHAQRVVIATGSIPMLPPVLKGLSAHLLTNESVFDLPTLPTSLAVFGPGILGMELAQAMSRLGVKVKVFGVGGGIAGIRDPAIRDYANKVLNEEFYLDASAQVKSVKEWAGGVEVHYLHRDGAWQTEPFEYVLAAAGRTPNLAGLVLENTGLQLNERGVPVFDRFTQQCGSSAIFIAGDASNDIPLLHEAADQGRIAGENAGRYPDIQPGLRRTPLAVVFTDPQIASVGFNLKQLNQQFKDRFAEGLVSFEDQGRSRVMLRNKGILKVYGEHGSGLFLGAEMFGPAAEHTGHLLAWAAQQRMTVSGMLEMPFYHPVIEEGLRTALRDLNHKLRIGPPVIERCMDCGPGA
SIO_010081: RFER_RS00910
subclass of: SO_0000673
so part of: RFER_RS00910
location: complement(179328..180770)
location: region:179328-180770:-1
so has part: feature:179328-180770:-1:exon

WP_041791182.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:179328-180770:-1:exon

RFER_RS00915
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00915
old locus tag: Rfer_0182
so part of: sequence
location: 180982..181188
location: region:180982-181188:1
so has part: feature:180982-181188:1:exon
subclass of: SO_0000010

position:180982:1
position: 180982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181188:1
position: 181188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180982-181188:1:exon

RFER_RS00915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00915
old locus tag: Rfer_0182
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011799440.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKHSPNPRDKQAPHTGKVENDSNKQGEQAPTQLNQGQRTPDSRSDRESHVGGSNQSQSRRGPVGTPKR
SIO_010081: RFER_RS00915
subclass of: SO_0000673
so part of: RFER_RS00915
location: 180982..181188
location: region:180982-181188:1
so has part: feature:180982-181188:1:exon

WP_011462513.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:180982-181188:1:exon

RFER_RS00920
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: phnE
locus tag: RFER_RS00920
old locus tag: Rfer_0183
so part of: sequence
location: complement(181202..181966)
location: region:181202-181966:-1
so has part: feature:181202-181966:-1:exon
subclass of: SO_0000010

position:181202:-1
position: 181202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181966:-1
position: 181966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181202-181966:-1:exon

RFER_RS00920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: phnE
locus tag: RFER_RS00920
old locus tag: Rfer_0183
EC number: 7.3.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015012331.1
GO component: GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015416 - ABC-type phosphonate transporter activity [Evidence IEA]
GO process: GO:0015716 - organic phosphonate transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphonate ABC transporter, permease protein PhnE
translation: MQTPRTNLLGLLAWGLLLALLAGSWRGADMRPFDLVRDAGNMATYAFDFFPPKFGDWRLYLQEMIVTLEIALWGTALAVVFAVPLGLLSSVNITPWWIHQPIRRLMDAARAINEMVFAMLFIVAVGLGPFAGVLALFVHTTGILAKLFSEAVESIDAQPVEGIRATGAHALEEIVYGIIPQVLPLWISYSLYRFESNVRSASVVGMVGAGGIGVILWEIIRGFQYAETCAVMIIIIVTVTVIDVISARIRKSLI
SIO_010081: RFER_RS00920
subclass of: SO_0000673
so part of: RFER_RS00920
location: complement(181202..181966)
location: region:181202-181966:-1
so has part: feature:181202-181966:-1:exon

WP_244095777.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:181202-181966:-1:exon

RFER_RS00925
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: phnD
locus tag: RFER_RS00925
old locus tag: Rfer_0184
so part of: sequence
location: complement(182005..182973)
location: region:182005-182973:-1
so has part: feature:182005-182973:-1:exon
subclass of: SO_0000010

position:182005:-1
position: 182005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182973:-1
position: 182973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182005-182973:-1:exon

RFER_RS00925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: phnD
locus tag: RFER_RS00925
old locus tag: Rfer_0184
EC number: 7.3.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014008087.1
GO component: GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
GO process: GO:0015716 - organic phosphonate transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphonate ABC transporter substrate-binding protein
translation: MIKKLLASLAGAALIAIHPVSAQELKEINFGIISTESSQNLRSDWQPVLDGMAKKTGMKVNAFFAPDYAGIIEGMRFNKVHVAWFGNKSAMEAVDRAGGEVFAQMVNADGTQGYYSHLIVHKDSPIKSLDDMLKQGKNLSFGNGDPNSTSGFLVPSYYVFAQNKIDPKTFFKLTRSANHESNALAVANKQVDVATNNSENLDKLKEKLPEKFNDIRVIWTSPLIPLDPLVIRKDLPEATKAKVRDFFYTYGQGGQQEKDNLFKLSKLSGFKASSNGQLIPIRQLELFKARNKFEADANLAAADKQSKLADIDKQLAALGKVQ
SIO_010081: RFER_RS00925
subclass of: SO_0000673
so part of: RFER_RS00925
location: complement(182005..182973)
location: region:182005-182973:-1
so has part: feature:182005-182973:-1:exon

WP_011462515.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:182005-182973:-1:exon

RFER_RS00930
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: phnC
locus tag: RFER_RS00930
old locus tag: Rfer_0185
so part of: sequence
location: complement(183015..183896)
location: region:183015-183896:-1
so has part: feature:183015-183896:-1:exon
subclass of: SO_0000010

position:183015:-1
position: 183015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183896:-1
position: 183896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183015-183896:-1:exon

RFER_RS00930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: phnC
locus tag: RFER_RS00930
old locus tag: Rfer_0185
EC number: 7.3.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011462516.1
GO component: GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO function: GO:0015416 - ABC-type phosphonate transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0015716 - organic phosphonate transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphonate ABC transporter ATP-binding protein
translation: MGIAISINALNKTFRGGRKALHDIHLDIKAGEMVALIGASGSGKSTLLRHMAGLMAGDGAGQGLIQIHGQTVQQNGRIAADIRRTRAGVGFVFQQFNLVDRLPVIVNVLAGTLHRVPLWRSLLRWFTPSEVARGVEALRRVGIAECCAQRASTLSGGQQQRAAIARAMVQGARVILADEPIASLDPESSRKVMDILARVNREDQCTVVVSLHQVNVAIKYCPRTVALHQGRVVYDGPSVALTPTLLRELYGADADDILALGDHITSLQDNKPVAPHLVWPAALAARAPLASAA
SIO_010081: RFER_RS00930
subclass of: SO_0000673
so part of: RFER_RS00930
location: complement(183015..183896)
location: region:183015-183896:-1
so has part: feature:183015-183896:-1:exon

WP_011462516.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:183015-183896:-1:exon

RFER_RS00935
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00935
old locus tag: Rfer_0186
so part of: sequence
location: 184049..185218
location: region:184049-185218:1
so has part: feature:184049-185218:1:exon
subclass of: SO_0000010

position:184049:1
position: 184049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185218:1
position: 185218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184049-185218:1:exon

RFER_RS00935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00935
old locus tag: Rfer_0186
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011485727.1
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MNRHLWLLAICQGLFLTNNVTFIAINGLVGLSLAPLGWMATLPVMGYVVGGALSTGLVARTQHRFGRKVSFQMGLLVALASSLLCAYAAVSRNFWLLCSATVVAGYYNANANLYRFAAAELTTLAWREEAVSLVMAGGLIGAVLGPNLAAQTRTLTSVPFAGAYLALAGVALLAMLVLAFINFPPPPVKKSTGSGRPLGEIMRQPVFIVAAAAGALSFGVMNLLMAATPLAMQQCSLPFSDVALVLEWHVIGMFAPGFFTGHLIKRFGTLTIMGVGVALNALCILVALSGVDLQQFLIALFLLGVGWNFLFTGSTTLSLQTYSPEEKDRAQGALNFFVFATLAVSSLASGVLVTTRGWQLLNVGSLLPVACTAAALVWLWLRQVRARVA
SIO_010081: RFER_RS00935
subclass of: SO_0000673
so part of: RFER_RS00935
location: 184049..185218
location: region:184049-185218:1
so has part: feature:184049-185218:1:exon

WP_041789978.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:184049-185218:1:exon

RFER_RS00940
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00940
old locus tag: Rfer_0187
so part of: sequence
location: complement(185215..186105)
location: region:185215-186105:-1
so has part: feature:185215-186105:-1:exon
subclass of: SO_0000010

position:185215:-1
position: 185215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186105:-1
position: 186105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185215-186105:-1:exon

RFER_RS00940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00940
old locus tag: Rfer_0187
EC number: 3.2.2.27
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011827904.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: uracil-DNA glycosylase
translation: MSLALDPRQRAMLQEMGVRVWLPAAAADLAAPALPAAVQAAPEAPSNAIENVATNITTTGATAQKILKTSAPPETRGTATGSGVPATDVAGLDWPALTQAIATCQACPLCIGRRTAVQAAPDAPRLADWLLVGEPPDDADEQAGAPFAGAAGQLLDNMLKALGLSRHAGSGVAAPAAQATTAAYVTPIVKCRPAQTRNPTQAELASCENYLRREVALVQPKVILALGRFAAQGLLQGSLPGLAGTPLGQLRGQIYRYQGIPVIVSYPPSYLLRSPQHKARAWVDLCQAQEALRRGG
SIO_010081: RFER_RS00940
subclass of: SO_0000673
so part of: RFER_RS00940
location: complement(185215..186105)
location: region:185215-186105:-1
so has part: feature:185215-186105:-1:exon

WP_011462518.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:185215-186105:-1:exon

RFER_RS00945
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: rimI
locus tag: RFER_RS00945
old locus tag: Rfer_0188
so part of: sequence
location: complement(186147..186614)
location: region:186147-186614:-1
so has part: feature:186147-186614:-1:exon
subclass of: SO_0000010

position:186147:-1
position: 186147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186614:-1
position: 186614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186147-186614:-1:exon

RFER_RS00945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: rimI
locus tag: RFER_RS00945
old locus tag: Rfer_0188
EC number: 2.3.1.266
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013596838.1
GO function: GO:0008999 - peptide-alanine-alpha-N-acetyltransferase activity [Evidence IEA]
GO process: GO:0036211 - protein modification process [Evidence IEA]; GO:0042254 - ribosome biogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosomal protein S18-alanine N-acetyltransferase
translation: MSAVPKTVEVRFEPLTPGQLDAVLHVEQQAYAHPWGRRNFEDSLKAGNQIQLLMAQDTLLGYFVAMKGVDEVHLLNITVAPDYQRQGWAQVLLDALTLWARGQGAEWLWLEVRVGNARAIKVYEAHGFCRVGQRKNYYPGDDGQREDAIVMSLRL
SIO_010081: RFER_RS00945
subclass of: SO_0000673
so part of: RFER_RS00945
location: complement(186147..186614)
location: region:186147-186614:-1
so has part: feature:186147-186614:-1:exon

WP_011462519.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:186147-186614:-1:exon

RFER_RS00950
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: tsaB
locus tag: RFER_RS00950
old locus tag: Rfer_0189
so part of: sequence
location: complement(186611..187330)
location: region:186611-187330:-1
so has part: feature:186611-187330:-1:exon
subclass of: SO_0000010

position:186611:-1
position: 186611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187330:-1
position: 187330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186611-187330:-1:exon

RFER_RS00950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: tsaB
locus tag: RFER_RS00950
old locus tag: Rfer_0189
EC number: 2.3.1.234
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016449115.1
GO function: GO:0003725 - double-stranded RNA binding [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
translation: MNLLAFDTSTDIMSVAVQRANAAGAATAQPSVWQHSGPGGAQTSAQLIPTIQRLMAQAGLQFADLDAIVFGRGPGSFTGLRTACSVAQGLAFGANLKVLPIDTLLAVAEEARFQQASALAHWQVLALLDARMDEMYAASYVFNSGKWKQIKDYSLIRPENLTQDDDCPLAGNVFANYGARLPGVAPRIEALPAACALLRLAPALLSAGGAVAAGQALPLYIRDKVAKTTLERATEKAAP
SIO_010081: RFER_RS00950
subclass of: SO_0000673
so part of: RFER_RS00950
location: complement(186611..187330)
location: region:186611-187330:-1
so has part: feature:186611-187330:-1:exon

WP_011462520.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:186611-187330:-1:exon

RFER_RS00955
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00955
old locus tag: Rfer_0190
so part of: sequence
location: complement(187418..188449)
location: region:187418-188449:-1
so has part: feature:187418-188449:-1:exon
subclass of: SO_0000010

position:187418:-1
position: 187418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188449:-1
position: 188449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187418-188449:-1:exon

RFER_RS00955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00955
old locus tag: Rfer_0190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019426755.1
GO function: GO:0005215 - transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DMT family transporter
translation: MHAASPSNSNAFSPRTIGIAAAVVTVLVWTSFILIARASSDPARGGTLTPFDLAFCRIVGASLVLLPWGALLVYRDRDRGIHQSSLLGVSPLSWRVTATVGLFGGLLYALLAYNGFVFAPAAHASVLMPGSLPLWTALLAALILHDHITPVRALGLGLIVLGDLLVGGRSLIGAFDGGEVWKGDLLFMLAALTWACYSVLARRHHLNAVRATIAITAFAFVTYVPVYTVLLLGGWVHGQVFSAPLREVLFQAVFQGWGSVVVSGITFTKMIQHFGPVRSTMITALVPGLSALGAVLLLGEPLYWNLAAGLVLVTLGILFGIRVALPVATKTIAAQAGSTVARG
SIO_010081: RFER_RS00955
subclass of: SO_0000673
so part of: RFER_RS00955
location: complement(187418..188449)
location: region:187418-188449:-1
so has part: feature:187418-188449:-1:exon

WP_041791184.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:187418-188449:-1:exon

RFER_RS00960
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: dacB
locus tag: RFER_RS00960
old locus tag: Rfer_0191
so part of: sequence
location: 188493..189962
location: region:188493-189962:1
so has part: feature:188493-189962:1:exon
subclass of: SO_0000010

position:188493:1
position: 188493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189962:1
position: 189962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188493-189962:1:exon

RFER_RS00960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: dacB
locus tag: RFER_RS00960
old locus tag: Rfer_0191
EC number: 3.4.16.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019576931.1
GO function: GO:0004175 - endopeptidase activity [Evidence IEA]; GO:0009002 - serine-type D-Ala-D-Ala carboxypeptidase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
translation: MSSPIRLLAILIGALTLWPALAQNLPPEVDAALARARVPRDAVSLLVMDAEGKLPPRLSHRATVPMSPASVMKLVTTYAALDLLGPAYSWRTPVYVEGSVKNGTLFGNLYIKGQGDPKLVAERLWLLLRRVQGLGIQKIAGDVVLDHSAFEPLDVDPASFDGEPLRPYNVAPDALLLNFKSVVMTFVPDLVANSASVQFEPPLYGVQMQASVPLANGTNGTKGAQGTNGSCGDYRAALKADFSDPARIRFAGSYPASCLEKAWPVAYADPASYNARAVQGLWQQMGGQLGGTVRLGSVPPQALGLPPKFEVASPPLAEVIRDINKYSNNVMAQQLFLTLSLNAQGQGTRAASRDLVQRWWQQRISATDVPTLDNGAGLSREARISAQALARLLQTAYVSPLMPELMSSLPIAGVDGTLKRSQAQSQGRAHLKTGSLRDVVAVAGYVHAASGRRYVLVALINHPNANAARPALEALLDWTVRDNGAHVPD
SIO_010081: RFER_RS00960
subclass of: SO_0000673
so part of: RFER_RS00960
location: 188493..189962
location: region:188493-189962:1
so has part: feature:188493-189962:1:exon

WP_041789980.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:188493-189962:1:exon

RFER_RS00965
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00965
old locus tag: Rfer_0192
so part of: sequence
location: 189949..190203
location: region:189949-190203:1
so has part: feature:189949-190203:1:exon
subclass of: SO_0000010

position:189949:1
position: 189949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190203:1
position: 190203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189949-190203:1:exon

RFER_RS00965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00965
old locus tag: Rfer_0192
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019576930.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SemiSWEET transporter
translation: MSLTELFGYCAAVLTTISFVPQAWHTFKTRDVRGISLGMYSVFTFGVACWLIYGLLLGAWPIVIANVVTLVLAGGILVMKLRFR
SIO_010081: RFER_RS00965
subclass of: SO_0000673
so part of: RFER_RS00965
location: 189949..190203
location: region:189949-190203:1
so has part: feature:189949-190203:1:exon

WP_011462523.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:189949-190203:1:exon

RFER_RS22855
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS22855
old locus tag: Rfer_0193
so part of: sequence
location: 190357..192348
location: region:190357-192348:1
so has part: feature:190357-192348:1:exon
subclass of: SO_0000010

position:190357:1
position: 190357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192348:1
position: 192348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190357-192348:1:exon

RFER_RS22855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS22855
old locus tag: Rfer_0193
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKQFRVLATALAAALLVAACGGGGNGDQTPPVKYSAVVSFGDSLSDAGTYNVGPIKNAGGGMFTVNGIAGAIGADTVPSDNWAQLVSASAVGKTSCSARVGGFGVAETAVAGCTNYAQGGSRVTDPNGIGNASGGAVAAGTTTAGALTEPVVTQIANYVKDSGGFTGNELITVLAGPNDLFAQLTKLTVDATAAGNAAGNTAFATAVVGALAADSTNPATAATAIGTAMPQAQAAAAKVAGATTTTIMQAAVTGAVQAAALAGNTKVMDMTYINGVVTTAKDFATAAGTAAGNQTFAGTLIGALAADATTPATAGPIIQTAFVTEAAKGSAMNVVVGAAAAAAAGQGNTKVVTDPTYVPTLVANATTAANAAGAAAGATAFATKLAGLLAADATVPATAGPAIGAAMAAAKATASAAPGATADSVNTAVVTAAVQAAAAAGNTKVMNMTYINAIAASAQASATTAGTAAGNQYVATTGAANAGVGVVTAAATLAGYVKDMVNKGAKHVVVLNLPDMSLTPSARSTIIYNADGSIKDNSSQRLVLALVKAFNAELQKDLGVTLGVPANGVLLVDFFTNMQNNVNDPGHYALTNTKDVACNLTAPANALATVGLDDGSSLVCNGSNLIAGDTSHYMFADKVHPTPYSHKLLSQVVNKIMIQAGWL
SIO_010081: RFER_RS22855
subclass of: SO_0000673
so part of: RFER_RS22855
location: 190357..192348
location: region:190357-192348:1
so has part: feature:190357-192348:1:exon

WP_011462524.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:190357-192348:1:exon

RFER_RS00980
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00980
old locus tag: Rfer_0194
so part of: sequence
location: 192375..193058
location: region:192375-193058:1
so has part: feature:192375-193058:1:exon
subclass of: SO_0000010

position:192375:1
position: 192375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193058:1
position: 193058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192375-193058:1:exon

RFER_RS00980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00980
old locus tag: Rfer_0194
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004340371.1
GO component: GO:0019867 - outer membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: OmpW family outer membrane protein
translation: MKHQMKFLAIAAAAMLAAGSVCAQTAGTWMVRAGATRLAPVGPSGCMTAPDYGDGSGCTRSNVSANTQLAGGITYMYTDNISVDVPLALPFKHDVIGAGSMEGAGKLGEVKALPMTVFLQYRFLEANAKFRPYVGLGVTYAYFFDEQGSYHLTQTTNPGGPPTSFTVDAKFILTPQIGATLALNDKWFIDVFYSKAKLSTTTHFSSGQTMPADLDPAAYGIAVGYKF
SIO_010081: RFER_RS00980
subclass of: SO_0000673
so part of: RFER_RS00980
location: 192375..193058
location: region:192375-193058:1
so has part: feature:192375-193058:1:exon

WP_011462525.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:192375-193058:1:exon

RFER_RS00985
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00985
old locus tag: Rfer_0195
so part of: sequence
location: complement(193116..194285)
location: region:193116-194285:-1
so has part: feature:193116-194285:-1:exon
subclass of: SO_0000010

position:193116:-1
position: 193116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194285:-1
position: 194285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193116-194285:-1:exon

RFER_RS00985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00985
old locus tag: Rfer_0195
EC number: 2.7.7.87
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013723208.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003725 - double-stranded RNA binding [Evidence IEA]; GO:0061710 - L-threonylcarbamoyladenylate synthase [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: L-threonylcarbamoyladenylate synthase
translation: MILDGFAASSIALGAQRIRAGGLLGLPTETVYGLAADAENDTAVAQIFTAKGRPADHPLIVHVRDAVCVGHFAAQVPDFADRLMQAFWPGPLTLILPRRPGVASAAAGGQDTIGLRCPSHPVAQMLLQALLQNGGQNPTHSESAKPQAKELASQPHGVWGIAAPSANQFGRVSPTTAAHVQSEFGPDLLILDGGACTVGIESTIIDCTRGQPVLLRPGAITREQVQAACGLKVLLKDELATDAAPAPKASGTLESHYAPKATVRLMDAAALRAALARWVADEAAMGPAAGVAVATRARAQAPALPTIAVYARSVHPNQSSRLLSQHMPADATAAARELFAVLRRLDAQGVQQIWIETPPAGAEWDGVRDRLQRAASQVGNPSWRDRRQP
SIO_010081: RFER_RS00985
subclass of: SO_0000673
so part of: RFER_RS00985
location: complement(193116..194285)
location: region:193116-194285:-1
so has part: feature:193116-194285:-1:exon

WP_011462526.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:193116-194285:-1:exon

RFER_RS00990
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS00990
old locus tag: Rfer_0196
so part of: sequence
location: complement(194300..195514)
location: region:194300-195514:-1
so has part: feature:194300-195514:-1:exon
subclass of: SO_0000010

position:194300:-1
position: 194300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195514:-1
position: 195514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194300-195514:-1:exon

RFER_RS00990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS00990
old locus tag: Rfer_0196
EC number: 6.3.4.18
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015914518.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004638 - phosphoribosylaminoimidazole carboxylase activity [Evidence IEA]
GO process: GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 5-(carboxyamino)imidazole ribonucleotide synthase
translation: MSGKTILPGTTGTAATAGSGQQTTLGVMGGGQLGRMFVQAAQAMGYFTAVLDPDVISPAGLVSHYHIQSDYLDQQGLAQLMQRCAAITTEFENVPAPALVTLGAHRPVAPGAEAVGIAQDRIKEKAHFVRCGVPVAPYAVIESAAQLAAVADDLLPGILKTARLGYDGKGQLRVSSRAELAAAWDELKNVACVLEKMLPLQAECSVIVARGWDGSCVNFAPQLNLHRDGILAVTQAYEGNMPSALVQQAVEATKSIANELRYVGVLCVEFFLLQDDSKAAQTLGSLIVNEMAPRPHNSGHYTLDACDLSQFDLQVRTLTGLPLLQPRQHSPAIMLNLLGDLWIDGASPPWDQVLALPGAHLHLYGKLKASKGRKMGHLTFTGATVAEVRATALAAARLLGIEAF
SIO_010081: RFER_RS00990
subclass of: SO_0000673
so part of: RFER_RS00990
location: complement(194300..195514)
location: region:194300-195514:-1
so has part: feature:194300-195514:-1:exon

WP_011462527.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:194300-195514:-1:exon

RFER_RS00995
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: purE
locus tag: RFER_RS00995
old locus tag: Rfer_0197
so part of: sequence
location: complement(195511..196002)
location: region:195511-196002:-1
so has part: feature:195511-196002:-1:exon
subclass of: SO_0000010

position:195511:-1
position: 195511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196002:-1
position: 196002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195511-196002:-1:exon

RFER_RS00995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: purE
locus tag: RFER_RS00995
old locus tag: Rfer_0197
EC number: 4.1.1.21
EC number: 5.4.99.18
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010464253.1
GO component: GO:0009320 - phosphoribosylaminoimidazole carboxylase complex [Evidence IEA]
GO function: GO:0004638 - phosphoribosylaminoimidazole carboxylase activity [Evidence IEA]
GO process: GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 5-(carboxyamino)imidazole ribonucleotide mutase
translation: MKIQIGVVMGSSSDWDTMQHAVHILQQFGITHEARVVSAHRMPDDMFAYAETARARGLQAIIAGAGGAAHLPGMLAAKTTVPVLGVPVASRHLSGVDSLHSIVQMPKGVPVATFAIGAAGAANAALFAVAMLANHDTALRTQLDAFRAAQTETARGMTLPPRL
SIO_010081: RFER_RS00995
subclass of: SO_0000673
so part of: RFER_RS00995
location: complement(195511..196002)
location: region:195511-196002:-1
so has part: feature:195511-196002:-1:exon

WP_041789984.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:195511-196002:-1:exon

RFER_RS01000
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: trxA
locus tag: RFER_RS01000
old locus tag: Rfer_0198
so part of: sequence
location: 196109..197017
location: region:196109-197017:1
so has part: feature:196109-197017:1:exon
subclass of: SO_0000010

position:196109:1
position: 196109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197017:1
position: 197017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196109-197017:1:exon

RFER_RS01000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: trxA
locus tag: RFER_RS01000
old locus tag: Rfer_0198
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015016134.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioredoxin
translation: MMNVTIANFDAEVVAASMTVPVLVDFWAPWCGPCKVIGPLLEKLETAYAGRFKLVKIDSDQEQELSQAFGVRSIPTCVLMFQGKPVDGFMGALPEGEIKAFLDKHLPAGEVLEAEVTAETVSDAPDENDPDAIREALQQAVLKNPDDEEARFNYVKRLLQEGRTDDAKVAFAPVIAKTALVRRFDSLQRWMDAIDFVADRADLTGAISGFDAKIAANKRDFDARFGKAQSLIAAQDWTDAMDELLEILMRDKSWADDLARKTYIAILDIIEPPKVKVADGQIPPVDPVVASYRRRLSSVVLS
SIO_010081: RFER_RS01000
subclass of: SO_0000673
so part of: RFER_RS01000
location: 196109..197017
location: region:196109-197017:1
so has part: feature:196109-197017:1:exon

WP_041791193.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:196109-197017:1:exon

RFER_RS01005
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01005
old locus tag: Rfer_0199
so part of: sequence
location: complement(197046..198479)
location: region:197046-198479:-1
so has part: feature:197046-198479:-1:exon
subclass of: SO_0000010

position:197046:-1
position: 197046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198479:-1
position: 198479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197046-198479:-1:exon

RFER_RS01005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01005
old locus tag: Rfer_0199
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018313770.1
GO function: GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
GO process: GO:0019516 - lactate oxidation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LutB/LldF family L-lactate oxidation iron-sulfur protein
translation: MSQVIKIHPMEDFKERSRGVLNDPGQRKNFRGAMDFLMAKRRAQFPDPEELQGLRDLGSAIRRYSLAHLPRLLEQLEAKLTANGVRVHWAQTPDEANAIALGIAQRVKAKRIIKGKSMVSEEVGFNHAMEAAGIEAFESDMGEYIVQLAGETPSHIIMPAIHKTKQEIAKLFADEIAGVAYTEDVDALIRIGRKVLRHKFADADIGLSGVNFCVAETGTLCLVENEGNGRMCTTVPRVHIAITGIEKVVEKLEHVPPLYSLLSRSATGQAVTTYFNLISGPRQPGEKDGPEEVHLILLDNGRTQAYADEELRETLKCIRCGACMNHCPVYARIGGHAYGTTYPGPIGAIISPHMLGLDATYPLAFASTLCGACVEVCPVKIPITDILVRLRNEAQARPDSMEATLRGSGAARTTAGTAVWSVWAQVYSRLGLYKLASWFMSRGRALSPTEQGAWTRSRTPLIPAPKRLRDLLKDRKP
SIO_010081: RFER_RS01005
subclass of: SO_0000673
so part of: RFER_RS01005
location: complement(197046..198479)
location: region:197046-198479:-1
so has part: feature:197046-198479:-1:exon

WP_011462530.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:197046-198479:-1:exon

RFER_RS01010
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01010
old locus tag: Rfer_0200
so part of: sequence
location: complement(198476..199150)
location: region:198476-199150:-1
so has part: feature:198476-199150:-1:exon
subclass of: SO_0000010

position:198476:-1
position: 198476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199150:-1
position: 199150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198476-199150:-1:exon

RFER_RS01010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01010
old locus tag: Rfer_0200
inference: COORDINATES: protein motif:HMM:NF014628.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lactate utilization protein
translation: MSARDSILARLRATSIAETLPLPDVKTWFDAHRRNEDTDQRVTRLRAALQAVKTEVHDVSATDWIEALLRIAASKGLRNLLIGTGTAHGAALQARQPEHLKLLPYADAIDSWRDVLFDDIDASLTLARSAIAEIGSLILWPNASEPRLMSLVPSVHFVLLDVATIHSDFHSAITTEGWKDGLPTNALLICGPSKTADIQQTLAYGAHGPRELVVLLRHAEGAAA
SIO_010081: RFER_RS01010
subclass of: SO_0000673
so part of: RFER_RS01010
location: complement(198476..199150)
location: region:198476-199150:-1
so has part: feature:198476-199150:-1:exon

WP_011462531.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:198476-199150:-1:exon

RFER_RS01015
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01015
old locus tag: Rfer_0201
so part of: sequence
location: complement(199147..199950)
location: region:199147-199950:-1
so has part: feature:199147-199950:-1:exon
subclass of: SO_0000010

position:199147:-1
position: 199147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199950:-1
position: 199950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199147-199950:-1:exon

RFER_RS01015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01015
old locus tag: Rfer_0201
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017874547.1
GO function: GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: (Fe-S)-binding protein
translation: MEPTTQFPRQYPPKPRDVYLFATCLIDQFTPEAGLDTVRLLEREGIKVHYLEQQTCCGQPAHSSGFPDEARAVALQQLNLFVEPWPVVIPSGSCGGMIRKHYPHLFANDPVLHAKAVDLSERVYELSEFLVHVVNFSQPDLGTPCTVALHTSCHARREMGSHETSAALLDSLAHVNVVEQARIEECCGFGGTFAMRYPDISEAIATDKVAAIKDTGAERVVSADCGCLLNITGRAAKQDEVAGRTNPTLPGEHLASFLWRRTTQAAS
SIO_010081: RFER_RS01015
subclass of: SO_0000673
so part of: RFER_RS01015
location: complement(199147..199950)
location: region:199147-199950:-1
so has part: feature:199147-199950:-1:exon

WP_011462532.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:199147-199950:-1:exon

RFER_RS01020
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01020
old locus tag: Rfer_0202
so part of: sequence
location: complement(200101..200874)
location: region:200101-200874:-1
so has part: feature:200101-200874:-1:exon
subclass of: SO_0000010

position:200101:-1
position: 200101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200874:-1
position: 200874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200101-200874:-1:exon

RFER_RS01020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01020
old locus tag: Rfer_0202
inference: COORDINATES: protein motif:HMM:NF019349.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FadR/GntR family transcriptional regulator
translation: MPARRPAITRLADTVAGELEKRILEGSLKPGDLLPSERDLAVELGVSRPSLREAIQKLVAKGLLSTHHGSGTHVTDRLEAHFVDPWQDMLNGHPLLHQDLLEFRQMLESQAACLAAERALDVDIQRLDAVYAALETTFASNDLQACIDQDVLFHQVIAEAAHNVLIGHLSASLMRVIHGHISGSLAHLHAQPQRWEQLQSQHRAIWQAVREHRPEAAARAARSHIEFVRQSMEDSARQEERRLSAMRRLGTLAPVSV
SIO_010081: RFER_RS01020
subclass of: SO_0000673
so part of: RFER_RS01020
location: complement(200101..200874)
location: region:200101-200874:-1
so has part: feature:200101-200874:-1:exon

WP_011462533.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:200101-200874:-1:exon

RFER_RS01025
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01025
old locus tag: Rfer_0203
so part of: sequence
location: complement(200927..201844)
location: region:200927-201844:-1
so has part: feature:200927-201844:-1:exon
subclass of: SO_0000010

position:200927:-1
position: 200927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201844:-1
position: 201844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200927-201844:-1:exon

RFER_RS01025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01025
old locus tag: Rfer_0203
EC number: 6.3.2.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011462534.1
GO function: GO:0004639 - phosphoribosylaminoimidazolesuccinocarboxamide synthase activity [Evidence IEA]
GO process: GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoribosylaminoimidazolesuccinocarboxamide synthase
translation: MNTSQPALHTSMLTSLPLLARGKVRDNYAVGIDRILMVASDRLSAFDVIMGEPIPGKGALLTQMALFWFDKLGPKGLNLCPIHLTGDAPESVVTAAEVPQVTGRSMLVKRLKPLPVEAVVRGYLAGSGWKEYQHNGAVCGVKLPAGLQNASKLPEPIYTPAAKAAAGDHDENITFEQTVEMIGLDLATRIRDISIAIYKAASEIARAKGIIIADTKFEFGLDADGTLTLMDEVLTPDSSRFWPAESYQEGINPPSFDKQFVRDWLEQVQVNGKPWNKTPPAPRVPDEVIAKTAAKYQEALTRLIG
SIO_010081: RFER_RS01025
subclass of: SO_0000673
so part of: RFER_RS01025
location: complement(200927..201844)
location: region:200927-201844:-1
so has part: feature:200927-201844:-1:exon

WP_011462534.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:200927-201844:-1:exon

RFER_RS01030
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: fba
locus tag: RFER_RS01030
old locus tag: Rfer_0204
so part of: sequence
location: complement(202100..203164)
location: region:202100-203164:-1
so has part: feature:202100-203164:-1:exon
subclass of: SO_0000010

position:202100:-1
position: 202100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:203164:-1
position: 203164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202100-203164:-1:exon

RFER_RS01030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: fba
locus tag: RFER_RS01030
old locus tag: Rfer_0204
EC number: 4.1.2.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011803231.1
GO function: GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis, and/or gluconeogenesis; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis, and/or gluconeogenesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class II fructose-bisphosphate aldolase
translation: MALVSMRELLDHAALNGYGIPAFNVNNLEQVQAVMSAADEVGAPVILQASAGARKYAGEPFIKHLILAAIEAYPHIPLVMHQDHGQSPDVCQGAINLGFSSVMMDGSLMSDGKTIASYDYNVEVTRKVVAMAHAVGVTVEGELGCLGSLETMKGDKEDGHGTEATMTREQMLTDPEQAADFVKRTQLDALAIAIGTSHGAYKFTRKPTGDILAIDRVMAINKRIPNTHLVMHGSSSVPQESLAIINQFGGKMRETYGVPVEEIQKAIKFGVRKINIDTDIRLAMTGAVRKYMFENPEKFDARDWLKPAREAAKALCKQRYLEFGCEGQGSKIKSHSLSVVAGQYARGELAQVVK
SIO_010081: RFER_RS01030
subclass of: SO_0000673
so part of: RFER_RS01030
location: complement(202100..203164)
location: region:202100-203164:-1
so has part: feature:202100-203164:-1:exon

WP_011462535.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:202100-203164:-1:exon

RFER_RS23820
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS23820
so part of: sequence
location: 203324..203473
location: region:203324-203473:1
so has part: feature:203324-203473:1:exon
subclass of: SO_0000010

position:203324:1
position: 203324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203473:1
position: 203473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203324-203473:1:exon

RFER_RS23820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS23820
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKPAVTRFANLLLLLPWPGVVQVPGGPMAKAPVKTPAAYAVCGLDGEGR
SIO_010081: RFER_RS23820
subclass of: SO_0000673
so part of: RFER_RS23820
location: 203324..203473
location: region:203324-203473:1
so has part: feature:203324-203473:1:exon

WP_166485622.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:203324-203473:1:exon

RFER_RS01035
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: pyk
locus tag: RFER_RS01035
old locus tag: Rfer_0205
so part of: sequence
location: complement(203470..204900)
location: region:203470-204900:-1
so has part: feature:203470-204900:-1:exon
subclass of: SO_0000010

position:203470:-1
position: 203470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204900:-1
position: 204900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203470-204900:-1:exon

RFER_RS01035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: pyk
locus tag: RFER_RS01035
old locus tag: Rfer_0205
EC number: 2.7.1.40
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019426766.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004743 - pyruvate kinase activity [Evidence IEA]
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyruvate kinase
translation: MPRRATKIVATLGPASSDPALLEQMIRSGVNVVRLNFSHGTAQDHIDRARLVREAAKRAGREIAIMADLQGPKIRVGKFADGKVLLEPGQKFVLDAARTELGDIDAVGLDYKALPNEVKAGDVLLLNDGLIVITVDAVQGAAIHTTVKLGGELSNNKGINKQGGGLSAPALTAKDMDDIRTAMSFHADYVAVSFPKNATDMEMARQLCNVAAENGHRPGLIAKIERAEAIPKLEEILLASDGIMVARGDLAVEVGNAVVPALQKRMIKLAREHDKVVITATQMMESMINNPVPTRAEVSDVANAVLDGTDAVMLSAETAAGKYPLETVVEMAKICHAAEGGEDFKLEADFTGKTFKRIDQSIAMGALFTAHHLGAKAIVAMTDSGSTALWMSRHLIQVPIYALTSKVATQRKMTLYRNVRPLFIDTSADRDTALNEAENYLKTRGIVQAGDIYAITCGEPMGSPGGTNMLKICRVR
SIO_010081: RFER_RS01035
subclass of: SO_0000673
so part of: RFER_RS01035
location: complement(203470..204900)
location: region:203470-204900:-1
so has part: feature:203470-204900:-1:exon

WP_011462536.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:203470-204900:-1:exon

RFER_RS01040
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01040
old locus tag: Rfer_0206
so part of: sequence
location: complement(205013..205666)
location: region:205013-205666:-1
so has part: feature:205013-205666:-1:exon
subclass of: SO_0000010

position:205013:-1
position: 205013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:205666:-1
position: 205666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205013-205666:-1:exon

RFER_RS01040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01040
old locus tag: Rfer_0206
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019430325.1
GO function: GO:0042834 - peptidoglycan binding [Evidence IEA]; GO:0015288 - porin activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: OmpA family protein
translation: MKTIASKTRTLVFGVSAVALLVSGCANMTETQRSSAIGAGVGALAGAAIGDSREATVIGAGVGALGGYIWSTQMAKKKADMERATAGTGVDVMQTADNQLKLNIPSDISFDINRFDIKPNMRPILDQFAQGLSSQPNTEIRIIGHTDSTGSDSINDPLSVNRAASARDYLVARGVDGRRIQINGRGSHEPIADNNTERGRAQNRRIEIFLAERSVAR
SIO_010081: RFER_RS01040
subclass of: SO_0000673
so part of: RFER_RS01040
location: complement(205013..205666)
location: region:205013-205666:-1
so has part: feature:205013-205666:-1:exon

WP_011462537.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:205013-205666:-1:exon

RFER_RS01045
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01045
old locus tag: Rfer_0207
so part of: sequence
location: complement(205907..206689)
location: region:205907-206689:-1
so has part: feature:205907-206689:-1:exon
subclass of: SO_0000010

position:205907:-1
position: 205907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206689:-1
position: 206689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205907-206689:-1:exon

RFER_RS01045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01045
old locus tag: Rfer_0207
EC number: 2.1.1.193
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019427464.1
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]
GO process: GO:0006364 - rRNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (uracil(1498)-N(3))-methyltransferase
translation: MPRFYCPTSLRCGDLLDLPASAARHVQVLRLQPGDSITLFNGGPGWDERDSEHTQGGEFEASVTRMGRSDVQVKVGAYHAVEREAAHRVHLAVGMPANERMDWLVEKATELGVASIQPLMTERSVLRLNPERAGKKQAHWQSVAVAACEQCGGNRVPVIHAVMTLAAWIKAQPAQASDQRLLLSLRPGAQSVRAAVKAFADPASAGAHTEAITFLSGPEGGLSPAEEDIALACGFAPVTLGARVLRAETAALAALAALLL
SIO_010081: RFER_RS01045
subclass of: SO_0000673
so part of: RFER_RS01045
location: complement(205907..206689)
location: region:205907-206689:-1
so has part: feature:205907-206689:-1:exon

WP_011462538.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:205907-206689:-1:exon

RFER_RS01050
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01050
old locus tag: Rfer_0208
so part of: sequence
location: complement(206825..207367)
location: region:206825-207367:-1
so has part: feature:206825-207367:-1:exon
subclass of: SO_0000010

position:206825:-1
position: 206825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:207367:-1
position: 207367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206825-207367:-1:exon

RFER_RS01050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01050
old locus tag: Rfer_0208
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007868923.1
GO function: GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: c-type cytochrome
translation: MTDNSPATVHDEAHSGPIKNPKQMLLAVTFSFVVPIFAIIGLVYYVTMGNKPAATEANSEQAVAARIQKIGRIEIRDANRPLRTGEEVFKAQCTACHTAGLVGAPKFGDAAAWAPRIQTGYDALLNSALKGKNAMVAQGGGEFQDLEVGRAVVYMVNAAGGKFAEPQAAAAPAEAASAAK
SIO_010081: RFER_RS01050
subclass of: SO_0000673
so part of: RFER_RS01050
location: complement(206825..207367)
location: region:206825-207367:-1
so has part: feature:206825-207367:-1:exon

WP_011462539.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:206825-207367:-1:exon

RFER_RS01055
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01055
old locus tag: Rfer_R0001
so part of: sequence
location: 207459..207534
location: region:207459-207534:1
so has part: feature:207459-207534:1:exon
subclass of: SO_0000663

position:207459:1
position: 207459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207534:1
position: 207534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207459-207534:1:exon

RFER_RS01055
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 338969
locus tag: RFER_RS01055
old locus tag: Rfer_R0001
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:207492..207494,aa:Arg,seq:ccg)
SIO_010081: RFER_RS01055
subclass of: SO_0000673
so part of: RFER_RS01055
location: 207459..207534
location: region:207459-207534:1
so has part: feature:207459-207534:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:207459-207534:1:exon

RFER_RS01060
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01060
old locus tag: Rfer_0210
so part of: sequence
location: complement(207965..208678)
location: region:207965-208678:-1
so has part: feature:207965-208678:-1:exon
subclass of: SO_0000010

position:207965:-1
position: 207965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:208678:-1
position: 208678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207965-208678:-1:exon

RFER_RS01060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01060
old locus tag: Rfer_0210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012348650.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MNRDLIVDARGIHAWYGSSHVLHGAQLQIARGQTVGLLGRNGMGKSTLIRTLLGHVAQRDGHITLFGKDASRFKPHKVARLGVAYVPEGRGVFPNLTVRENLVMAARRGVDGRNDWSFERVMATFPRLKERLTNLGAQLSGGEQQMLSIGRALMTHPELIVLDEATEGLAPLIVADIWRVIGEIRKSGIATLIVDRDYRRVLAHADQALVLQKGQVLLQGTAEDVANDPALSTYLGV
SIO_010081: RFER_RS01060
subclass of: SO_0000673
so part of: RFER_RS01060
location: complement(207965..208678)
location: region:207965-208678:-1
so has part: feature:207965-208678:-1:exon

WP_011462540.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:207965-208678:-1:exon

RFER_RS01065
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01065
old locus tag: Rfer_0211
so part of: sequence
location: complement(208680..209432)
location: region:208680-209432:-1
so has part: feature:208680-209432:-1:exon
subclass of: SO_0000010

position:208680:-1
position: 208680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:209432:-1
position: 209432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208680-209432:-1:exon

RFER_RS01065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01065
old locus tag: Rfer_0211
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009551810.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MSPSDMLLRGHEITRRWGGLLALNKVSLALQRGTVHAVIGTNGAGKSTLINILSGEIQPSSGKVELLGQDVTTWSQPRRARAGLGRSYQRNTIYPSFTVLENCRLAAQANVQKPWAWWSDAQRCSASMDSARAAATRAGLDDLLDRQAGLLSHGQKRQLEIAMCLATKPQVLLLDEPLAGMGAEETERMLTLLAELKASHAILLVEHDMDAVFRIADCITVMVNGTVIACGSPDFVRNSPEVRIAYLGEH
SIO_010081: RFER_RS01065
subclass of: SO_0000673
so part of: RFER_RS01065
location: complement(208680..209432)
location: region:208680-209432:-1
so has part: feature:208680-209432:-1:exon

WP_041789986.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:208680-209432:-1:exon

RFER_RS01070
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01070
old locus tag: Rfer_0212
so part of: sequence
location: complement(209419..210432)
location: region:209419-210432:-1
so has part: feature:209419-210432:-1:exon
subclass of: SO_0000010

position:209419:-1
position: 209419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210432:-1
position: 210432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209419-210432:-1:exon

RFER_RS01070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01070
old locus tag: Rfer_0212
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011802325.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO process: GO:0015803 - branched-chain amino acid transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: branched-chain amino acid ABC transporter permease
translation: MKSSKFFFVAAAFVLLALWPLMAGQYGVDLVTKIMVFAIFALSLELLVGSTGLVCFGQAAFFGIGAYATVLLTPQDGAPSLLWLLPACVLAAALYALLVGALSLRTKGVYFIMVTLAFAQMAYYVVHDTPLGGGTDGIYLMAKPVVLGTLLDLDKPMAFYGFTLACLTAVFGFLTLLLRSRFGRALAGIRVNEQRMRATGFSTYPYKLAAFVISGGMAGLAGFLFAVKDGFVNPELISWHLSGEVLIMIILGGLGHLRGALIGAFAFALLQEFFKSEAIFGEFAKHWHLGLGLSIIACVALLPRGLVGVPEQVITRLRGRSGRVRDDSVVEVSHESV
SIO_010081: RFER_RS01070
subclass of: SO_0000673
so part of: RFER_RS01070
location: complement(209419..210432)
location: region:209419-210432:-1
so has part: feature:209419-210432:-1:exon

WP_011462542.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:209419-210432:-1:exon

RFER_RS01075
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01075
old locus tag: Rfer_0213
so part of: sequence
location: complement(210447..211328)
location: region:210447-211328:-1
so has part: feature:210447-211328:-1:exon
subclass of: SO_0000010

position:210447:-1
position: 210447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211328:-1
position: 211328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210447-211328:-1:exon

RFER_RS01075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01075
old locus tag: Rfer_0213
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011462543.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO process: GO:0015803 - branched-chain amino acid transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: branched-chain amino acid ABC transporter permease
translation: MDLTTFLIQCLNALQYGLLLFLVASGLTLIFGIMGVINLAHGSFYMIGAYMAYALAPIVGGTFSGGFFATLAVGLVLAVLLGYVLEWAFFSFLYERDHLQQVLMTYGLILVFEELRSLLVGDDVHGVQAPDFLAGTLPLGELMTYPVYRLFISGVCLVLALAMYFVFTRTRLGMMIRAGSANREMVQSLGIDIKFLYRVVFAAGVAIAVFAGMIAAPVSSVYPGMGNTVLIICFVVVVIGGIGSIRGALLAALLIGVVDTFGKVLLPQASGVLVYVLMALILLVKPDGLFKAG
SIO_010081: RFER_RS01075
subclass of: SO_0000673
so part of: RFER_RS01075
location: complement(210447..211328)
location: region:210447-211328:-1
so has part: feature:210447-211328:-1:exon

WP_011462543.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:210447-211328:-1:exon

RFER_RS01080
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01080
old locus tag: Rfer_0214
so part of: sequence
location: complement(211341..212522)
location: region:211341-212522:-1
so has part: feature:211341-212522:-1:exon
subclass of: SO_0000010

position:211341:-1
position: 211341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212522:-1
position: 212522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211341-212522:-1:exon

RFER_RS01080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01080
old locus tag: Rfer_0214
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012348654.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MSSSHKTLISRAVATLALSALSALPTLAQGLPKLKVGLMLPYTGTYAALGNAIENGFRLHIAEQGGKLGGREIEFVKVDDESDPSKATDNVNKLIKRDNVDVLIGSVHSGVAMAMAKVAKDTGTVLIVPNAGADAVTGPMCASNIFRSSFSNWQPGYAMGEVVAKKGHKKVVTITWKYAAGDESIRGFKESFEKGGGKVVKELNLPFPNVEFQALLTEIAAAKPDAVYTFFAGGGAVKFVKDYAAAGLKKTIPLYGAGFLTDGTLDAQGADAADLLTTLHYADSLNTPRDNAFRLSYAKAYKLQPDVYAVQGYDAAQMLAVGLAAVKGDIGKKAEFTTAIEKAKIDSPRGPFTLSRSHNPVQDIYLRQVGGKENKLASIASKALADPGRGCRL
SIO_010081: RFER_RS01080
subclass of: SO_0000673
so part of: RFER_RS01080
location: complement(211341..212522)
location: region:211341-212522:-1
so has part: feature:211341-212522:-1:exon

WP_011462544.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:211341-212522:-1:exon

RFER_RS01085
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01085
old locus tag: Rfer_0215
so part of: sequence
location: complement(212519..213334)
location: region:212519-213334:-1
so has part: feature:212519-213334:-1:exon
subclass of: SO_0000010

position:212519:-1
position: 212519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213334:-1
position: 213334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212519-213334:-1:exon

RFER_RS01085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01085
old locus tag: Rfer_0215
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011802322.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta hydrolase
translation: MSEAFAFVEVDWAGRTVCIEHRWIAPERTTAPLIVFLHEGLGSLAMWKDFPQRLCDAALCRGLVYSRPGYGRSTPRAAQEAWGLDFMHQQAHVVLPAFLHAVGIDPVAQAPWLLGHSDGASIALLYAAQFAQAIAGAIVVAPHILVEELSLTSIAAARTAYLETDLRQRLAKYHDDPDSAFWGWNNIWLHPPFREWSIEAEIEAIRCPLLAAQGMDDEYGTLEQIHGIARRVPQTELLELSDCGHSPHRDQAERLIAAASAFITQQTGDKP
SIO_010081: RFER_RS01085
subclass of: SO_0000673
so part of: RFER_RS01085
location: complement(212519..213334)
location: region:212519-213334:-1
so has part: feature:212519-213334:-1:exon

WP_011462545.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:212519-213334:-1:exon

RFER_RS01090
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01090
old locus tag: Rfer_0216
so part of: sequence
location: complement(213331..214929)
location: region:213331-214929:-1
so has part: feature:213331-214929:-1:exon
subclass of: SO_0000010

position:213331:-1
position: 213331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214929:-1
position: 214929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213331-214929:-1:exon

RFER_RS01090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01090
old locus tag: Rfer_0216
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012348656.1
GO function: GO:0016405 - CoA-ligase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: benzoate-CoA ligase family protein
translation: MNASTTTDMPAVTPPGDSFNFAQHLLSCNSQRASKVAFIDDQGALSYGQLNERVRRVAAGLRSLGIKREERVLLLMHDCNDWPVSFLGAMYAGIVPVAVNTLLTADDYAYMLEHSRAQAVLVSGALLPALTAAMTKSDHEVGKVIVSRPVAPLHPAEVEYETFVQAQSPLLKPAATSPDDPGFWLYSSGSTGRPKGAVHSHGNPYWTAELYGKAVLSLTERDTCFSAAKLFFAYGLGNALSFPMSVGATTILMAERATPDATFKRWLGQVGGVKPTVFYGAPTGFAGMLASPNLPARSDVALALVSSAGEALPAELGERFKRHFGVDIVDGIGSTEMLHIFLSNTPQRVRYGTTGWPVPGYDIELRGEDGAAVPDGEPGDLYIHGPSAAMMYWGNRAKTRETFQGGWTKSGDKYVRNSDGSYTYGGRSDDMLKVSGIYVSPFEVEATLVQHPSVLEAAVIGVPDAQGLTKTKAFVVLKAGAQATEAELQAFVKDKLAPYKYPRQIAFVDDLPKTATGKIQRFKLRELEAHAA
SIO_010081: RFER_RS01090
subclass of: SO_0000673
so part of: RFER_RS01090
location: complement(213331..214929)
location: region:213331-214929:-1
so has part: feature:213331-214929:-1:exon

WP_011462546.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:213331-214929:-1:exon

RFER_RS01095
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01095
old locus tag: Rfer_0217
so part of: sequence
location: complement(214978..216540)
location: region:214978-216540:-1
so has part: feature:214978-216540:-1:exon
subclass of: SO_0000010

position:214978:-1
position: 214978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216540:-1
position: 216540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214978-216540:-1:exon

RFER_RS01095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01095
old locus tag: Rfer_0217
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011802320.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase
translation: MTELIPNFFAGQWQTGSAAGTPLLDPVLGTELVRVDATGLDLAAGFAFAREQGGAALRALNYRERAAMLAAAVKVLQANRDAYYEIATANSGTVKNDSAVDIDGAIFTLGTYAKLGETLGERHHLLDSEATRLGKDPLFQSQHVLVPTRGVALFINAFNFPAWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVKDVVDAGILPSGALSVICGGSAGLMDALQAFDVVSFTGSAETAAVIRSHPAVAQRFVRVNIEADSVNSALLLPDAAPGSEAFDLLVKEVVREMTVKSGQKCTAIRRIFVPEASYDAAAQAIAARLAKTTVGNPRNEAVRMGALVNRAQLTSVRQGLDYLKQQAEMLHDGATHALVDADPAMACCVGPALLGVSDVDGADRVHDTEVFGPVATLLPYRDTTHALSLVRRGQGSLVASLYGSDSASLGATALELADSHGRVHVISPDVGQLHTGHGNVMPQSLHGGPGRAGGGEELGGLRALGFYHRRSAVQASTAVLATLQPPQAA
SIO_010081: RFER_RS01095
subclass of: SO_0000673
so part of: RFER_RS01095
location: complement(214978..216540)
location: region:214978-216540:-1
so has part: feature:214978-216540:-1:exon

WP_011462547.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:214978-216540:-1:exon

RFER_RS01100
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01100
old locus tag: Rfer_0218
so part of: sequence
location: complement(216546..217010)
location: region:216546-217010:-1
so has part: feature:216546-217010:-1:exon
subclass of: SO_0000010

position:216546:-1
position: 216546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217010:-1
position: 217010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:216546-217010:-1:exon

RFER_RS01100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01100
old locus tag: Rfer_0218
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012356426.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4863 family protein
translation: MPSTQFREQIAELSAQLAGRPLDASLDAWLNAKHGVETPTFEHLKQSCQAGVSEGWLCDREGGGIRYGRIFKPAPDLHGFSVDVVDMQDIAGPHHTHPNGEIDLIMPLDAGAQFDGRPAGWLVCPPGSSHRPTVTGGRALVLYLLPEGSITFTR
SIO_010081: RFER_RS01100
subclass of: SO_0000673
so part of: RFER_RS01100
location: complement(216546..217010)
location: region:216546-217010:-1
so has part: feature:216546-217010:-1:exon

WP_011462548.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:216546-217010:-1:exon

RFER_RS01105
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01105
old locus tag: Rfer_0219
so part of: sequence
location: 217100..218074
location: region:217100-218074:1
so has part: feature:217100-218074:1:exon
subclass of: SO_0000010

position:217100:1
position: 217100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218074:1
position: 218074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217100-218074:1:exon

RFER_RS01105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01105
old locus tag: Rfer_0219
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013953517.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MSSTILHTSGFTPSISSADQDSSPTFVNPAEGGGDGEKNPFLAALGERVRALRARRGMTRKALAMVADVSERHLANLEYGVGNASILVLLQVAGALQCSLGELIGDVTTSSPEWLMIRELLEQRDDATLQRVRIAIGEMLGTGGGNAGLSPRIALIGLRGAGKSTLGQMLADDLGFPFVELSREIEKFAGCSVSEIQALYGVSAYRRYERRALEEAIQIYPEAVIATPGGLVSDAATFNELLAHCTTVWLQADPEDHMKRVTAQGDLRPMAASKEAMEDLKGILHGRAPFYSKAQFKLDTSAQPLGPTFNALRDMVRKVLQLPA
SIO_010081: RFER_RS01105
subclass of: SO_0000673
so part of: RFER_RS01105
location: 217100..218074
location: region:217100-218074:1
so has part: feature:217100-218074:1:exon

WP_011462549.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:217100-218074:1:exon

RFER_RS01110
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: boxC
locus tag: RFER_RS01110
old locus tag: Rfer_0220
so part of: sequence
location: 218191..219849
location: region:218191-219849:1
so has part: feature:218191-219849:1:exon
subclass of: SO_0000010

position:218191:1
position: 218191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219849:1
position: 219849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218191-219849:1:exon

RFER_RS01110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: boxC
locus tag: RFER_RS01110
old locus tag: Rfer_0220
EC number: 4.1.2.44
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018308957.1
GO function: GO:0016830 - carbon-carbon lyase activity [Evidence IEA]
GO process: GO:0010128 - benzoate catabolic process via CoA ligation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2,3-epoxybenzoyl-CoA dihydrolase
translation: MSTPSRVEYQITPSQYKHWKLEFNGPVATLKADFDENAGLRPGYKLKLNSYDLGVDIELNDAISRIRFEHPEVRTVVVTSARDRVFCSGANIFMLGVSSHAWKVNFCKFTNETRNGLEDSSAHSGLKFLAAVNGACAGGGYELALACDEIILVDDRSSAVSLPEVPLLGVLPGTGGLTRITDKRHVRHDLADLFCTSAEGVRGDKAVAWRLVDAVAKPAVFAQKVQERALALAAQSDRPADAKGVALTPLERSIEADALRYTHVTVEIDRAKRTATFTVKAPTGVQPSDIAGIEAAGAAWYPLAMARELEDAILNMRTNETEIGTWLIKTEGEAKAVLAMDATLLAHKNHWLVRETLGLLRRTFSRLDVSSRSLFALIEAGSCFAGTLLELALACDRSYQLVLPNDEASTPRITVTETNFGLYPMATTQSRLGRRFYDEQSALDSVRARIGEALDADAAFALGLVTSNPDDIDWADEVRIAIEERVSMSPDSLTGLEANLRFNGQENMSTRIFGRLTAWQNWIFQRPNAVGEKGALKVYGKGDKAAFDWNRV
SIO_010081: RFER_RS01110
subclass of: SO_0000673
so part of: RFER_RS01110
location: 218191..219849
location: region:218191-219849:1
so has part: feature:218191-219849:1:exon

WP_041789987.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:218191-219849:1:exon

RFER_RS01115
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: boxB
locus tag: RFER_RS01115
old locus tag: Rfer_0221
so part of: sequence
location: 219922..221349
location: region:219922-221349:1
so has part: feature:219922-221349:1:exon
subclass of: SO_0000010

position:219922:1
position: 219922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221349:1
position: 221349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219922-221349:1:exon

RFER_RS01115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: boxB
locus tag: RFER_RS01115
old locus tag: Rfer_0221
EC number: 1.14.13.208
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015003274.1
GO function: GO:0051213 - dioxygenase activity [Evidence IEA]
GO process: GO:0010128 - benzoate catabolic process via CoA ligation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: benzoyl-CoA 2,3-epoxidase subunit BoxB
translation: MSSITYSDKIPNNVNLSEDRTLQRALEQWQPNYLKWWGDMGPDDSQNFDVYLRTAVSVDPQGWAQFGHVKMPDYRWGIFLNPAEKDRKIHFGDHKGEDAWQDVPGEYRANLRRIIVTQGDTEPASVEQQRHLGLTAPSQYDLRNLFQVNVEEGRHLWAMVYLLHKYFGRDGREEGEALLARRSGQENNPRILQAFNEETPDWLSFFMFTYFTDRDGKFQLCALAESSFDPLARTTKFMLTEEAHHMFVGESGISRIIQRTCQAMNEMKTDDVSKLRAAGVIDLPTIQRYLNFHFSVTIDLFGADESSNAATFYNTGLKGRFEEGKRMDDHQLKGGTYKVLNVQGGQLVEKEVPMLNALNEVLRDDYIKDSIGGVERWNKVIEKSGIPFKLKVPHKAFHRNIGALAQVKVSPEGRVLSDAEWKANVDNWLPSETDRAFVGSLMGRVVEAGKFANWIAPPMLGINRQSADFEYVRFN
SIO_010081: RFER_RS01115
subclass of: SO_0000673
so part of: RFER_RS01115
location: 219922..221349
location: region:219922-221349:1
so has part: feature:219922-221349:1:exon

WP_011462551.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:219922-221349:1:exon

RFER_RS01120
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: boxA
locus tag: RFER_RS01120
old locus tag: Rfer_0222
so part of: sequence
location: 221364..222635
location: region:221364-222635:1
so has part: feature:221364-222635:1:exon
subclass of: SO_0000010

position:221364:1
position: 221364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222635:1
position: 222635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221364-222635:1:exon

RFER_RS01120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: boxA
locus tag: RFER_RS01120
old locus tag: Rfer_0222
EC number: 1.14.13.208
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018008456.1
GO function: GO:0051213 - dioxygenase activity [Evidence IEA]
GO process: GO:0010128 - benzoate catabolic process via CoA ligation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: benzoyl-CoA 2,3-epoxidase subunit BoxA
translation: MDMSDLQAIKQHLIDPEICIRCNTCEAICPVAAITHDTRNYVVDADKCNLCMDCISPCPTGSIDNWRNMPRVGAYSVEEQLTWDELPPELTVEQLAELGVAADTPPVEAPVPQSAAGVPDSFNSAQYGATLPPWSAAHAYTNLYGPKAAEKTITATVAGNVRVTAVGHEYDTHHVVLDFGSLPLPVLEGQSIGIIPRGVDASGRPHHARQYSVASPRNGERPGYNNLSLTIKRVLQDHQGNAVRGVGSNYMCDLQVGDKVQVIGPFGASFLMPNQPRSHIVMICTGTGSAPMRAMTEWRRRLRQSGKFEGGKLMLFFGARTKEELPYFGPLQNLPKDFIDINFAFSRTPEQPKRYVQDLMRERAADLADLLADSNTYFYVCGLKSMEEGVVLALRDVAQQAGLSWETMGAALKAEGRLHLETY
SIO_010081: RFER_RS01120
subclass of: SO_0000673
so part of: RFER_RS01120
location: 221364..222635
location: region:221364-222635:1
so has part: feature:221364-222635:1:exon

WP_011462552.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:221364-222635:1:exon

RFER_RS01125
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01125
old locus tag: Rfer_0223
so part of: sequence
location: 222635..223432
location: region:222635-223432:1
so has part: feature:222635-223432:1:exon
subclass of: SO_0000010

position:223432:1
position: 223432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:222635-223432:1:exon

RFER_RS01125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01125
old locus tag: Rfer_0223
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011802314.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: enoyl-CoA hydratase-related protein
translation: MRVWETLVLSQRAPGVAQVTMARPAVFNAFDETMITELGEVFTELADDASVRVVVLAGDGKHFSAGADLQWMQRASAASTQWNLQDARRFAAMLAGIENCPKPTVARIQGAALGGGVGLTCACDIAIATENAYFAVSEAKFGILPAVIGPYLVNAVGKRQAKRLALTTTRITAAQAQVMGLVQQVVAGDALDVAVDASVTELLAGGPQAQSEIKQLYAQLEVGPVSAEVRELTAQTISRVRGTDEAREGFAAFLGKRAANWIPKA
SIO_010081: RFER_RS01125
subclass of: SO_0000673
so part of: RFER_RS01125
location: 222635..223432
location: region:222635-223432:1
so has part: feature:222635-223432:1:exon

WP_011462553.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:222635-223432:1:exon

RFER_RS01130
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01130
old locus tag: Rfer_0224
so part of: sequence
location: 223429..224937
location: region:223429-224937:1
so has part: feature:223429-224937:1:exon
subclass of: SO_0000010

position:223429:1
position: 223429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224937:1
position: 224937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223429-224937:1:exon

RFER_RS01130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01130
old locus tag: Rfer_0224
EC number: 1.1.1.35
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013104587.1
GO function: GO:0070403 - NAD+ binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO process: GO:0006631 - fatty acid metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-hydroxyacyl-CoA dehydrogenase
translation: MTNKLKDAPMLVVGAGIMGVGIAQVAAQAGHTVLLFDARDGAAEQAREKLAKTFEGLVAKGKLSADDAAQTLSRIEPIASLDAAAGVRLVVEAIVEKLDAKRGLFQQLEAIIATDCVLASNTSSISVTAIANGLQHPQRLVGMHFFNPVPLMKLVEVVSGLQTAAAVAAAIFDLSKDWGKVPVSARSTPGFIVNRIARPYYAEALALLQEQAAAPAVLDACLRAAGFRMGPCELMDLIGHDTNFSVTQSVFEANFYDKRYVPSLVQRELVDGGLLGRKSGRGFYDYAEGVSAPELETVEPVLLPTAQLLRVYGQGPVADRLAASLVQAGQAFLRVPSSDWVGLGVEGAQLRLTDGRTATQLGVEVAVFDLPLNGASGAALAWAPSLRASSAWTRAAPRWLATLGFKPQRVADAPALVVARTLAMLINEAADAVQQGVCTQDGADAAMKLGVNYPAGPFEWLAQWSTPAVLGVLDALDNHYRGERYRVSPWLRQRPWMDSEAS
SIO_010081: RFER_RS01130
subclass of: SO_0000673
so part of: RFER_RS01130
location: 223429..224937
location: region:223429-224937:1
so has part: feature:223429-224937:1:exon

WP_041789989.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:223429-224937:1:exon

RFER_RS01135
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01135
old locus tag: Rfer_0225
so part of: sequence
location: 224934..225389
location: region:224934-225389:1
so has part: feature:224934-225389:1:exon
subclass of: SO_0000010

position:224934:1
position: 224934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225389:1
position: 225389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224934-225389:1:exon

RFER_RS01135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01135
old locus tag: Rfer_0225
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013538581.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MaoC family dehydratase
translation: MKFADFYAGQIIQAGPVAVSEAEVIGFASAYDPQWFHTDADAAQHGRFGGLIASGWHTCGLAMRLVADAALHGSESFASPGLAYVKWPHPVRPGDHLSLTATVLESRRSSGKSHLGILRWRWQLFNNKGTEVLDLEATSLFDLSTSTSIPP
SIO_010081: RFER_RS01135
subclass of: SO_0000673
so part of: RFER_RS01135
location: 224934..225389
location: region:224934-225389:1
so has part: feature:224934-225389:1:exon

WP_011462555.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:224934-225389:1:exon

RFER_RS01140
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: pcaF
locus tag: RFER_RS01140
old locus tag: Rfer_0226
so part of: sequence
location: 225386..226588
location: region:225386-226588:1
so has part: feature:225386-226588:1:exon
subclass of: SO_0000010

position:225386:1
position: 225386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226588:1
position: 226588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225386-226588:1:exon

RFER_RS01140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: pcaF
locus tag: RFER_RS01140
old locus tag: Rfer_0226
EC number: 2.3.1.174
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005799654.1
GO function: GO:0016747 - acyltransferase activity, transferring groups other than amino-acyl groups [Evidence IEA]
GO process: GO:0019619 - 3,4-dihydroxybenzoate catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-oxoadipyl-CoA thiolase
translation: MTHAFICDAIRTPFGRYGGALSGVRADDLGAIPLRALMARNPQVDWAALTDVLLGCANQAGEDNRNVARMSALLAGLPQEVPGATINRLCGSSLDAVGAAARAIKSGEAQLMIAGGVESMSRAPFVMPKMDAAFSRSNAVYDTTIGWRFVNKLMKAQYGVDSMPETAENVATDFHIEREAQDLMALRSQQNALRAQQSGFFDVEITPVSISQKKGDPLLVTQDEHPRATTLESLAKLKGVVRPDGTVTAGNASGVNDGACALLLANEAAAARYGLSPRARVVGMAAAGVAPRIMGFGPAPATRKVLELTGLSLAQMDVIELNEAFAAQGLAVLRDLGLADDDARVNPNGGAIALGHPLGASGARLVTTAVNQLHRSAGRYALCTMCIGVGQGIALVLERV
SIO_010081: RFER_RS01140
subclass of: SO_0000673
so part of: RFER_RS01140
location: 225386..226588
location: region:225386-226588:1
so has part: feature:225386-226588:1:exon

WP_011462556.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:225386-226588:1:exon

RFER_RS01145
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01145
old locus tag: Rfer_0227
so part of: sequence
location: complement(226601..227182)
location: region:226601-227182:-1
so has part: feature:226601-227182:-1:exon
subclass of: SO_0000010

position:226601:-1
position: 226601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227182:-1
position: 227182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226601-227182:-1:exon

RFER_RS01145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01145
old locus tag: Rfer_0227
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015011908.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hemerythrin domain-containing protein
translation: MSRESLRIIHDEHDALSAMLRSIGMMVDRGPGNEPESFFDVLRAMLFYIDEFPERLHHTKETELLFPRVVRLAPETAQAIEQLDKDHTRGESAVRELQHLLLAWELVGDSRRVAFETAVKVYLAFYLEHMRLEETVILPVAQKVLSAADWDELDAAFATNCDPLTGKYPRDPAYDRLFTRIVSQAPAPIGLGA
SIO_010081: RFER_RS01145
subclass of: SO_0000673
so part of: RFER_RS01145
location: complement(226601..227182)
location: region:226601-227182:-1
so has part: feature:226601-227182:-1:exon

WP_011462557.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:226601-227182:-1:exon

RFER_RS01150
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: boxB
locus tag: RFER_RS01150
old locus tag: Rfer_0228
so part of: sequence
location: complement(227325..228827)
location: region:227325-228827:-1
so has part: feature:227325-228827:-1:exon
subclass of: SO_0000010

position:227325:-1
position: 227325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228827:-1
position: 228827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227325-228827:-1:exon

RFER_RS01150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: boxB
locus tag: RFER_RS01150
old locus tag: Rfer_0228
EC number: 1.14.13.208
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008905742.1
GO function: GO:0051213 - dioxygenase activity [Evidence IEA]
GO process: GO:0010128 - benzoate catabolic process via CoA ligation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: benzoyl-CoA 2,3-epoxidase subunit BoxB
translation: MSEPTPTEIIEPVEAIQNDAFVAVSYDDLIPNNVDLSSDKQLQRALEGWQPNYIDWWKDMGPEGFQNADVYLRTAVGVDPSGWAKFGHVKMPDYRWGILLAPKEEGRTIPCGRHKGEPAWQEVPGEYRSLLRRLIVVQGDTEPASVEQQRFLGATAPSLYDMRNLFQVNVEEGRHLWAMVYLLVKYFGRDGREEAQALLERRSGQQDNPRILGAFNERTPDWLSFFMFTYFTDRDGKMQLAALAQSGFDPLSRSCRFMLTEEAHHLFVGETGVGRTIEATCLAMKAAGITDPYAKEAIRKLGVIDLPTLQKKANFHMSVTRDLFGSEISSNAASAFSTGLKGRFNETALDDDHQLENATYPVQRVIDGQLVTEEVPALRAINSRLLDDYIADCQGGIDRWNKVIEKCGIAFRFSQPHKGFNRRIGEFAETHVSPAGELLSAQAWHAGKSDWLCSDEDHTFINSLMKPCVQPGQYASWIAPPRVGINNQPKDFEYVRIEHS
SIO_010081: RFER_RS01150
subclass of: SO_0000673
so part of: RFER_RS01150
location: complement(227325..228827)
location: region:227325-228827:-1
so has part: feature:227325-228827:-1:exon

WP_011462558.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:227325-228827:-1:exon

RFER_RS23825
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS23825
old locus tag: Rfer_0229
so part of: sequence
location: complement(228957..229193)
location: region:228957-229193:-1
so has part: feature:228957-229193:-1:exon
subclass of: SO_0000010

position:228957:-1
position: 228957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229193:-1
position: 229193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228957-229193:-1:exon

RFER_RS23825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS23825
old locus tag: Rfer_0229
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTMDATPQIPFIDTINTRYLETLLGYNARRDSLVGTAQSHHRWKHLHCDVPPYMTHPAASSLQQTGTKVHIFVCGTL
SIO_010081: RFER_RS23825
subclass of: SO_0000673
so part of: RFER_RS23825
location: complement(228957..229193)
location: region:228957-229193:-1
so has part: feature:228957-229193:-1:exon

WP_166485623.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:228957-229193:-1:exon

RFER_RS01155
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01155
old locus tag: Rfer_0230
so part of: sequence
location: complement(229420..230013)
location: region:229420-230013:-1
so has part: feature:229420-230013:-1:exon
subclass of: SO_0000010

position:229420:-1
position: 229420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230013:-1
position: 230013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229420-230013:-1:exon

RFER_RS01155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01155
old locus tag: Rfer_0230
inference: COORDINATES: protein motif:HMM:NF013234.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cupin domain-containing protein
translation: MKKQTTASADAQKMGLGMQVRQRRRIKGLTLTELSQQSGLSVGLLSQIERGLSSPSLKSMTQICTALGVPLSWLFDNGPLENPAEKGLVVRRGSRRRLDLGTYGVTKELLSPDLGGEMQIYLVSIRPGGQSGPETYTHRGEEGGLVLTGTLELTVDDRIVLLYEGDSFRFRSSLAHRFANPGTTQANVVWANSLAFY
SIO_010081: RFER_RS01155
subclass of: SO_0000673
so part of: RFER_RS01155
location: complement(229420..230013)
location: region:229420-230013:-1
so has part: feature:229420-230013:-1:exon

WP_011462560.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:229420-230013:-1:exon

RFER_RS01160
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01160
old locus tag: Rfer_0231
so part of: sequence
location: 230160..231443
location: region:230160-231443:1
so has part: feature:230160-231443:1:exon
subclass of: SO_0000010

position:230160:1
position: 230160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231443:1
position: 231443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230160-231443:1:exon

RFER_RS01160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01160
old locus tag: Rfer_0231
EC number: 1.-.-.-
inference: COORDINATES: protein motif:HMM:NF013434.2
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-binding oxidoreductase
translation: MSQPNCSSLWASTAAPDIEASALQGTVPADVVIVGAGFTGCAAALAMAQRGARVRLLEANVVGWGASGRTGGQVIPGLKFDPDEIEAMFGPDLGPRMVNAVGSVGDEVFGLIEQHAISCDAQRKGWLQPAFSTRSLDLALRRCDSWQRRGADVAPVGRSEMARLLGTDHYLGGWEDRRAGHVQPMSYVRGLAGAAQRAGAVIHIDSPALSLTRQGAKWRVSTPQGAVDADQVLLATNGYTDGLWPGLARTVVPMMSFQAATIPISEDLGKSILPEGHAASDTRRLLWYFRRDAHGRLTMGGRAPYREDLGAADADYVRNAVNRLYPQFKNTPFEFHWAGRVAMTQDHIPHLNRLDNGLWAALGYNGRGVGMATLFGRYLADLASGVPAQDIPFPVTSMRPIQGYPFTRLVARALVSYYRIRDQLEAV
SIO_010081: RFER_RS01160
subclass of: SO_0000673
so part of: RFER_RS01160
location: 230160..231443
location: region:230160-231443:1
so has part: feature:230160-231443:1:exon

WP_011462561.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:230160-231443:1:exon

RFER_RS01165
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01165
old locus tag: Rfer_0232
so part of: sequence
location: 231496..232242
location: region:231496-232242:1
so has part: feature:231496-232242:1:exon
subclass of: SO_0000010

position:231496:1
position: 231496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232242:1
position: 232242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231496-232242:1:exon

RFER_RS01165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01165
old locus tag: Rfer_0232
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006463753.1
GO component: GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MSRLLRLFTLCLVFIGSLASAQAPLRVGSTPSGIPFTFLDTKTNKISGVMVDLISEIGKDQGFAVEINAMAWGSLIAALQGNKIDVIAAAMYITPPRQEVVDFSDPIYTYGEGLFVAASDAKDYKTYEDLKGEVVGVQIGTAYVKPLQASGLFKEVKVYDSISDIMRDVNLGRIKAGFGDYPIVAYQLGQGAFPETRLVKGYKSVWVGSVGIAVRKGDKATIDKINAALRKFKADGTIDRVLARWNLK
SIO_010081: RFER_RS01165
subclass of: SO_0000673
so part of: RFER_RS01165
location: 231496..232242
location: region:231496-232242:1
so has part: feature:231496-232242:1:exon

WP_011462562.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:231496-232242:1:exon

RFER_RS01170
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01170
old locus tag: Rfer_0233
so part of: sequence
location: 232263..232916
location: region:232263-232916:1
so has part: feature:232263-232916:1:exon
subclass of: SO_0000010

position:232263:1
position: 232263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232916:1
position: 232916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232263-232916:1:exon

RFER_RS01170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01170
old locus tag: Rfer_0233
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011807997.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO process: GO:0006865 - amino acid transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amino acid ABC transporter permease
translation: MAAFALKDLIEFAPILAQGAVVTVEVFACGLIVATLLGLVWALMRVSGVAALAVFSKGLINTIRGIPILVQLFFIYFVLPDVGIQLSAFQAGFIGLGFAYSCYMAEVFRGGIEAVDPGQVEAAKSLGMGRAMTMWRVVLPQAFKVALPPYGNTCIMLIKDTSQASIITVTELTFQSKVIAASTFKNAEVFTLVALFYLLLCIPLIMIVGRLEKRFGR
SIO_010081: RFER_RS01170
subclass of: SO_0000673
so part of: RFER_RS01170
location: 232263..232916
location: region:232263-232916:1
so has part: feature:232263-232916:1:exon

WP_011462563.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:232263-232916:1:exon

RFER_RS01175
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01175
old locus tag: Rfer_0234
so part of: sequence
location: 232916..233647
location: region:232916-233647:1
so has part: feature:232916-233647:1:exon
subclass of: SO_0000010

position:233647:1
position: 233647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232916-233647:1:exon

RFER_RS01175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01175
old locus tag: Rfer_0234
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006224000.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amino acid ABC transporter ATP-binding protein
translation: MISIRNIRKSFGSNLVLDDISLDVSQGEVVCVIGASGSGKSTLLRCVNGLETYDAGDITVDGQRVDHVGRQMVAIREKVAMVFQRFNLFPHRTALENVMEGPIYVKRESRESAMRNARALLAQVGLAGKEDAYPASLSGGQQQRVAIARALAMQPRAILFDEPTSALDPELVGEVLSVMRALANQGMTMMVVTHEMGFAREVADRVIFIDRGHIVEQGPARAVLAAPQHERTQDFLRRVTHPM
SIO_010081: RFER_RS01175
subclass of: SO_0000673
so part of: RFER_RS01175
location: 232916..233647
location: region:232916-233647:1
so has part: feature:232916-233647:1:exon

WP_011462564.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:232916-233647:1:exon

RFER_RS01180
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01180
old locus tag: Rfer_0235
so part of: sequence
location: 233909..234439
location: region:233909-234439:1
so has part: feature:233909-234439:1:exon
subclass of: SO_0000010

position:233909:1
position: 233909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234439:1
position: 234439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233909-234439:1:exon

RFER_RS01180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01180
old locus tag: Rfer_0235
inference: COORDINATES: protein motif:HMM:NF013224.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Lrp/AsnC family transcriptional regulator
translation: MREFIDPTDRRLAKLLSSDAQDSVNQLADKLQLSPPTVRTRLRSLIEKNVLKIVGLLNLSERPELIAAVVGINANAQGHMDDLMKKIAELPFVTSVSLVTGRFDLIVEVLVAGDVQDLYRVTSELLPKVAGPGVVSRSETFVVMKSHNKWINLPRGCWEQGGNEEQLTTLSKPKKR
SIO_010081: RFER_RS01180
subclass of: SO_0000673
so part of: RFER_RS01180
location: 233909..234439
location: region:233909-234439:1
so has part: feature:233909-234439:1:exon

WP_011462565.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:233909-234439:1:exon

RFER_RS01185
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01185
old locus tag: Rfer_0236
so part of: sequence
location: 234509..235303
location: region:234509-235303:1
so has part: feature:234509-235303:1:exon
subclass of: SO_0000010

position:234509:1
position: 234509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235303:1
position: 235303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234509-235303:1:exon

RFER_RS01185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01185
old locus tag: Rfer_0236
inference: COORDINATES: protein motif:HMM:NF012707.2
GO component: GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MSNFLPAILLACAGFAGVAATAHASTLDDIQKRGELRIAVQTQGPPFSMIDKNGERTGSSVELAKLMAKEMGVKAVFLDLDWDGLLPALISGKADLLAADMTPTLARATKVAFTKPFIYIGPVVAAKAGSKFTSTAACKAPGTKIAVLFGSTGEKLAKTVFEKGEIKSYKGGGTLLLDAVKNGQADCLLNDSSAVAGQAAGYPAGTFKVMPELLAKEPLAYATRYDSLDLLTWINLFIDQTTLDGRLQQNLDYWVNSAKWKEAH
SIO_010081: RFER_RS01185
subclass of: SO_0000673
so part of: RFER_RS01185
location: 234509..235303
location: region:234509-235303:1
so has part: feature:234509-235303:1:exon

WP_279587714.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:234509-235303:1:exon

RFER_RS01190
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01190
old locus tag: Rfer_0237
so part of: sequence
location: 235386..236054
location: region:235386-236054:1
so has part: feature:235386-236054:1:exon
subclass of: SO_0000010

position:235386:1
position: 235386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236054:1
position: 236054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235386-236054:1:exon

RFER_RS01190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01190
old locus tag: Rfer_0237
inference: COORDINATES: protein motif:HMM:NF012738.2
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO process: GO:0006865 - amino acid transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amino acid ABC transporter permease
translation: MLLNLNFRVIGETLPEFWVGFVSTLSISLTAFAGAIAIGIIACAMSIQPSRLVRAPAVAYVDVIRATPLLAQLYFLYFGLPSFGVIMPETVIGIIALSINSGAYVSEIIRSGIMSIPHGQVEASASSGMNYWQQMRLIILPQALRPMVSPLIGQAIVLVKDSSLLSLISVLELTRAGQTLANDRFMPVEGLATTAVGYLIIYFGLKLMAAAWMRINHPSERH
SIO_010081: RFER_RS01190
subclass of: SO_0000673
so part of: RFER_RS01190
location: 235386..236054
location: region:235386-236054:1
so has part: feature:235386-236054:1:exon

WP_011462567.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:235386-236054:1:exon

RFER_RS01195
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01195
old locus tag: Rfer_0238
so part of: sequence
location: 236071..236715
location: region:236071-236715:1
so has part: feature:236071-236715:1:exon
subclass of: SO_0000010

position:236071:1
position: 236071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236715:1
position: 236715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236071-236715:1:exon

RFER_RS01195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01195
old locus tag: Rfer_0238
inference: COORDINATES: protein motif:HMM:NF012738.2
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO process: GO:0006865 - amino acid transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amino acid ABC transporter permease
translation: MFLEQIHGIAQYYPVILKGIGVTLALSFIGIVAGTLIGFVLGIGRASSHKLLSLVVGAYTDIFRGTPVLVQVFVVFFILPEAGIELDSFTAGALALSNIAACFISEIVASGIRAVPIGQVEAAASAGLTRLQQLRLVVMPQATRMIVPSLVGQFVLLVKDSSVVSAIGLLDLTRSGWIIVQSVPNGMLVFSVVGIGYFLICYPLLHLSRRMEKT
SIO_010081: RFER_RS01195
subclass of: SO_0000673
so part of: RFER_RS01195
location: 236071..236715
location: region:236071-236715:1
so has part: feature:236071-236715:1:exon

WP_041789991.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:236071-236715:1:exon

RFER_RS01200
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01200
old locus tag: Rfer_0239
so part of: sequence
location: 236787..237512
location: region:236787-237512:1
so has part: feature:236787-237512:1:exon
subclass of: SO_0000010

position:236787:1
position: 236787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:237512:1
position: 237512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236787-237512:1:exon

RFER_RS01200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01200
old locus tag: Rfer_0239
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003818574.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amino acid ABC transporter ATP-binding protein
translation: MIKFNELNKWYGAHHVLQNINLEVAKGEVVVVCGPSGSGKSTLIRCVNGLEKFQSGTLIVDGLSVANEANLRQLRMELGFVFQQFNLYPHKTALENVTLAPIHVRKLPRKEAISRGREILEKVGLGDKFDAYPQQLSGGQQQRVAIARSLCMQPKVMLFDEPTSALDPEMINEVLDVMVSLAKDGMTMIVVTHEMGFARKVADRVVFIDKGVIVEVAEPEAFFTAPKNERTREFLGKILQH
SIO_010081: RFER_RS01200
subclass of: SO_0000673
so part of: RFER_RS01200
location: 236787..237512
location: region:236787-237512:1
so has part: feature:236787-237512:1:exon

WP_011462569.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:236787-237512:1:exon

RFER_RS01205
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01205
old locus tag: Rfer_0240
so part of: sequence
location: 237561..238838
location: region:237561-238838:1
so has part: feature:237561-238838:1:exon
subclass of: SO_0000010

position:237561:1
position: 237561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:238838:1
position: 238838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237561-238838:1:exon

RFER_RS01205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01205
old locus tag: Rfer_0240
EC number: 1.-.-.-
inference: COORDINATES: protein motif:HMM:NF013434.2
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-binding oxidoreductase
translation: MSHTGNTGTESKRSIAIIGAGVVGAASALALAAEGYLVTVFDHGEIGAGTSSGNAGGIVTGAVTPTATPGVLRSIPSYILDPHGAAVLRPSYFFQVLPWLLRFIEAGRPTRVSTIARALDPLVSKAMQSHLALADVSGSRDLIRPVGWLKVYGSDAGFSETELERELMTRHGVNFSVLTADEVADLEPKLNKNSYTRGLFQPDSGFVNYPMGLTQAYFEGARQRQAQYIQECVLEVRPSEGGGISIKTDKTSRRFDSVVVAAGAWSKKFAKQIGDSVSLDTERGYHISFGSTGDELLRRPVGFPEKHCVLSPMHDGISLVSGDELAGLTAPPDYRRIRALAPFARSVLPGLAEQTIQREWMGYRPSTPDSLPVIGRSPSCRNVFYAFGHGHLGLTLAAITAQLIAGMVSGRPDPFDLSPYRIDRF
SIO_010081: RFER_RS01205
subclass of: SO_0000673
so part of: RFER_RS01205
location: 237561..238838
location: region:237561-238838:1
so has part: feature:237561-238838:1:exon

WP_011462570.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:237561-238838:1:exon

RFER_RS01210
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01210
old locus tag: Rfer_0241
so part of: sequence
location: 238882..239595
location: region:238882-239595:1
so has part: feature:238882-239595:1:exon
subclass of: SO_0000010

position:238882:1
position: 238882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239595:1
position: 239595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238882-239595:1:exon

RFER_RS01210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01210
old locus tag: Rfer_0241
inference: COORDINATES: protein motif:HMM:NF005679.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aspartate/glutamate racemase family protein
translation: MINETESAKIGILCWETGQVPRGLQQLESLRGNSTNPASYGYPVRLHPVRGANVHTILENPDQTVLGTMIADARTMVSEGIKAITTSCGFNAIFQRELVESVGVPVFTSSLLQVPLARRICGLQSEICIITANAGALRSEHLTSVGIAGTDGLHILGLEQCAEWNRMFAEPDAEIDLDVIEQEVLGTARRALDEHPGIRAFALECTDLPPYSAAIRSQSGLPVFDFITMVNYLHSTL
SIO_010081: RFER_RS01210
subclass of: SO_0000673
so part of: RFER_RS01210
location: 238882..239595
location: region:238882-239595:1
so has part: feature:238882-239595:1:exon

WP_011462571.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:238882-239595:1:exon

RFER_RS23830
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS23830
so part of: sequence
location: complement(239607..239750)
location: region:239607-239750:-1
so has part: feature:239607-239750:-1:exon
subclass of: SO_0000010

position:239607:-1
position: 239607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239750:-1
position: 239750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239607-239750:-1:exon

RFER_RS23830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS23830
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFLRISANERGNREFSQNLSQPHRAAGLRMGFVRQERQAHANPMRPL
SIO_010081: RFER_RS23830
subclass of: SO_0000673
so part of: RFER_RS23830
location: complement(239607..239750)
location: region:239607-239750:-1
so has part: feature:239607-239750:-1:exon

WP_166485624.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:239607-239750:-1:exon

RFER_RS01215
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01215
old locus tag: Rfer_0242
so part of: sequence
location: 239749..240939
location: region:239749-240939:1
so has part: feature:239749-240939:1:exon
subclass of: SO_0000010

position:239749:1
position: 239749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240939:1
position: 240939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239749-240939:1:exon

RFER_RS01215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01215
old locus tag: Rfer_0242
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020722945.1
GO function: GO:0033926 - glycopeptide alpha-N-acetylgalactosaminidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycoside hydrolase 100 family protein
translation: MTNLIGDGLAKIEACAQASLALLQHNLTPHGILAASRTEAAIARRYTRIFARDAAICVLAMCGSGDELLEQGAVDSLDVLATQQAGNGQIPKYVDPEGQDADFWYLGCIDSTLWWLIAVDHVHRQGVIDPERWQVEVQRAIAWLLAQEHQHFRLLQQNEASDWADIMPRSGYVLYSNALWYEVKRRYGLTSIQTTHHHFNHLFNPFQRDLPEYHRARLLQHYARRGQRDPGLYLSFVNLSFAGNEGDVFGNLLAILCGLASESTGHRIVKTIIAANASQPYPIRVVLHPLSRQHELWRPYMARHQQNLMHQYHNGGIWPFVGGFWVMALVRLGLRELAWQELTRLSSVNELDDWRFTEWFHGHSLQPMGMAGQSWNAAAFLLARRAVLGVSSFSAP
SIO_010081: RFER_RS01215
subclass of: SO_0000673
so part of: RFER_RS01215
location: 239749..240939
location: region:239749-240939:1
so has part: feature:239749-240939:1:exon

WP_041789993.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:239749-240939:1:exon

RFER_RS01220
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01220
old locus tag: Rfer_0243
so part of: sequence
location: complement(241060..241338)
location: region:241060-241338:-1
so has part: feature:241060-241338:-1:exon
subclass of: SO_0000010

position:241060:-1
position: 241060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241338:-1
position: 241338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241060-241338:-1:exon

RFER_RS01220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01220
old locus tag: Rfer_0243
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPLWQRVGKIIQGEPQVADASAFYNQLQERLNQNQPLAADALAKLGAQRTEAILAALKEAGVDPARAAAAAPEKVESDVGKPVPLKLGLVAK
SIO_010081: RFER_RS01220
subclass of: SO_0000673
so part of: RFER_RS01220
location: complement(241060..241338)
location: region:241060-241338:-1
so has part: feature:241060-241338:-1:exon

WP_011462573.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:241060-241338:-1:exon

RFER_RS01225
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01225
old locus tag: Rfer_0244
so part of: sequence
location: complement(241500..242285)
location: region:241500-242285:-1
so has part: feature:241500-242285:-1:exon
subclass of: SO_0000010

position:241500:-1
position: 241500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242285:-1
position: 242285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241500-242285:-1:exon

RFER_RS01225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01225
old locus tag: Rfer_0244
inference: COORDINATES: protein motif:HMM:NF021235.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c3 family protein
translation: MNHNIVARKMLLPCESKCWLRLCVEIFFGRTELIDPIRMLVGAMLFLILGVATAQTAGAGIKGTAHDPGIWSFGFEQQVCVMCHAPHNTNTQGPLWNRAANNTSYTLYASSTMNATPGQPGSVSKLCLSCHDGTVGVLDYGGATGGMTLAEASSCTNPLGCSGVLGTNLSNDHPIGITYDAALATADKGLNDPSTKTVTIGSTASRSGTIATMMLSGGKVECSSCHDVHNIYTVAGSTGTSKGLVKVGMAGSSLCLQCHTK
SIO_010081: RFER_RS01225
subclass of: SO_0000673
so part of: RFER_RS01225
location: complement(241500..242285)
location: region:241500-242285:-1
so has part: feature:241500-242285:-1:exon

WP_011462574.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:241500-242285:-1:exon

RFER_RS01230
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01230
old locus tag: Rfer_0245
so part of: sequence
location: 242614..243378
location: region:242614-243378:1
so has part: feature:242614-243378:1:exon
subclass of: SO_0000010

position:242614:1
position: 242614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243378:1
position: 243378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242614-243378:1:exon

RFER_RS01230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01230
old locus tag: Rfer_0245
inference: COORDINATES: protein motif:HMM:NF023273.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3365 domain-containing protein
translation: MQKLKPFTPFEVFQTLEAVLQPLRKIRKWGALQTRKFGKEVQNRAKNRRPLTTGILLFLTIRFLAGVLTTVSMAGFSPAAHSQESTESRSVQDSRKVALQVSQDLRTQLIREMQLSGPLRSLVACKYTCPEILSMQSRKTGWRVAAVSLKPRNSALGMADAWEQKVIADFDRRVAKGEKGETLEFVEIVSEPQGRYFRYAKAMMVERLCLQCHGSSDQRPDSVKAQLATDYPFDQAVDFRIGQVYGIVSIKRGV
SIO_010081: RFER_RS01230
subclass of: SO_0000673
so part of: RFER_RS01230
location: 242614..243378
location: region:242614-243378:1
so has part: feature:242614-243378:1:exon

WP_049765591.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:242614-243378:1:exon

RFER_RS01235
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01235
old locus tag: Rfer_0246
so part of: sequence
location: 243448..244908
location: region:243448-244908:1
so has part: feature:243448-244908:1:exon
subclass of: SO_0000010

position:243448:1
position: 243448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244908:1
position: 244908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243448-244908:1:exon

RFER_RS01235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01235
old locus tag: Rfer_0246
inference: COORDINATES: protein motif:HMM:NF014567.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAMP domain-containing sensor histidine kinase
translation: MKLTLRAKGILAFMALVAYVGAGDLILSQERSNLLLYFSEMERIYTTESALGKTTYAVSHSMLKLEERFFSNDSLPPAFEEHIALDVELIQAGLMGLQDYYPWLKKRNDRLDQDMARLRTEPSHGSMVSLREHGKELSSELDQITRELRERKSLLWQRYRNEYDIMSFTAAVMTLVGALIFGALIALFLTRLASDIRRLATRALDIVVGYRGPPVEVTRDDEVGDLMKAINRMQSELRLRERQLEISREQRFHKEKMAAIGSLAAAVAHEINNPIAAIAGIAQSLKDSGRHASCAEFGIDPSDLILEQAKRITAISRQIAELTAPHSPEHELLDLNSLVRNTCNFIAYDKRFDKIEMALNLDSQIPAINAIADHLTQVLMNLLINAADALEDVHQRSPTIWVATLATKSELLLTVSDNGKGMDSSVLAHAFDEAYTTKPPNKGRGLGLFLCKSLLESCGNRIELESTLGVGTSVRVRLTLASHPGA
SIO_010081: RFER_RS01235
subclass of: SO_0000673
so part of: RFER_RS01235
location: 243448..244908
location: region:243448-244908:1
so has part: feature:243448-244908:1:exon

WP_049765592.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:243448-244908:1:exon

RFER_RS01240
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01240
old locus tag: Rfer_0247
so part of: sequence
location: 244915..246318
location: region:244915-246318:1
so has part: feature:244915-246318:1:exon
subclass of: SO_0000010

position:244915:1
position: 244915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246318:1
position: 246318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244915-246318:1:exon

RFER_RS01240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01240
old locus tag: Rfer_0247
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012349112.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sigma-54 dependent transcriptional regulator
translation: MPSLNVLVVDDEPALRQILAAAVIKAGYSVEQANGVKQAATMLSRGDFDVALCDIKMPDGNGIELVRNCRAAGIETTFIMVTGFASIETAVEALQAGASDYITKPVRYEEVAHRLSQIDALRGLREENKALRKVVSDSSPKLYRFTSPGMLEVERLAGKVAPTDCTVLITGESGTGKGVVARLINDQSKRRTGPFLQVNCSAVPEHLLESEFFGHTKGAFTGADHARKGLFLQANGGTLFLDEIGELPLHMQTKLLHMVEDKEVRALGSEQVRHVDTRIIAATNADLVNLVKEGKFREDLYFRLSMFQIQIPPLNERQTDMPGLIRFLLHNLCPSGLGTMEIDPLAEEILLAHRWPGNVRELENVITRACILAEDNRISVADLPATIIQTNLPKTLAGAAIGSNGSLRDQMRKLELEILQRAIEGAGGDRKLAAQKLGIGLSSLYRKFDEFQPDALSSGDAAPVHPS
SIO_010081: RFER_RS01240
subclass of: SO_0000673
so part of: RFER_RS01240
location: 244915..246318
location: region:244915-246318:1
so has part: feature:244915-246318:1:exon

WP_011462577.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:244915-246318:1:exon

RFER_RS01245
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01245
old locus tag: Rfer_0248
so part of: sequence
location: 246341..247348
location: region:246341-247348:1
so has part: feature:246341-247348:1:exon
subclass of: SO_0000010

position:246341:1
position: 246341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247348:1
position: 247348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246341-247348:1:exon

RFER_RS01245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01245
old locus tag: Rfer_0248
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hydrolase
translation: MDFKLIHVLKWGLLALTAIVTFESLAVGSDASVTLGTRVVAGKITEWQVPVPKFARDPAIGRDGNVYFAVRSGDQIARFDPKLKIFQDWNVPVGTQPLGVVVARDGKVLFGGFGNGTVGELDPSTGKIKIYLIPSVDSNPYTLVLDGEDNIWFTLRKVGKVARLERASGKITEYPIGDKPYSVALDQSGNVWVTRMAADRIVRLEPKTGKVTELLLGSGSHPRRTAVAPDGMLWVSLYGTGKLVKIDPTVCRVIKEYALPGGPNAGPYAVNADANGRIWVSEIQTDSVIMLDPRSEDIQIFKLPTKNTGIRNAAIDSEGHYWYVGSQAGKLGVIE
SIO_010081: RFER_RS01245
subclass of: SO_0000673
so part of: RFER_RS01245
location: 246341..247348
location: region:246341-247348:1
so has part: feature:246341-247348:1:exon

WP_011462578.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:246341-247348:1:exon

RFER_RS01250
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01250
old locus tag: Rfer_0249
so part of: sequence
location: complement(247380..247940)
location: region:247380-247940:-1
so has part: feature:247380-247940:-1:exon
subclass of: SO_0000010

position:247380:-1
position: 247380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247940:-1
position: 247940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247380-247940:-1:exon

RFER_RS01250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01250
old locus tag: Rfer_0249
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIPVAASTSSRPAYRRQINYVDKSIQRSLLIALVVLEVALVCVSTWVTYWHLNNLLEESLYRVHLVQTEPILTRLVTEGFAVLGVFALVNLTALMVAQKIWSRHENLVLKDFTKLIAKTRKLDFSSDPSSHPQTEVLALAMAWRAQERTRFTAIRNQVAKLEASVSAGKSPQTLLLAVEDLNKLLS
SIO_010081: RFER_RS01250
subclass of: SO_0000673
so part of: RFER_RS01250
location: complement(247380..247940)
location: region:247380-247940:-1
so has part: feature:247380-247940:-1:exon

WP_011462579.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:247380-247940:-1:exon

RFER_RS23250
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS23250
old locus tag: Rfer_0250
so part of: sequence
location: complement(247937..248728)
location: region:247937-248728:-1
so has part: feature:247937-248728:-1:exon
subclass of: SO_0000010

position:247937:-1
position: 247937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248728:-1
position: 248728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247937-248728:-1:exon

RFER_RS23250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS23250
old locus tag: Rfer_0250
inference: COORDINATES: protein motif:HMM:NF025890.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c3 family protein
translation: MSTYKWFIAGFGVAALGMAALLHADVGRGNGHPARTDCGVCHLAGPNVDQDQASKLVSSQELLCARCHARAIEVSHPSGFAPKRSLPAEYPLDWKGDLTCSTCHLPHGREPGLLRGKKHGKDFCLTCHDQAFFRSMKDAGTSMVISGHLDVSRGRSTIDIDVHSLHCLGCHAGSHSDGGSVSIGSSGVLRHASGAAPHPIGRSYRDASKRGGFQPENQLAQKKILLSDGRISCISCHEAYKKEHGKLVVSNERSALCLACHAK
SIO_010081: RFER_RS23250
subclass of: SO_0000673
so part of: RFER_RS23250
location: complement(247937..248728)
location: region:247937-248728:-1
so has part: feature:247937-248728:-1:exon

WP_084795413.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:247937-248728:-1:exon

RFER_RS01265
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01265
old locus tag: Rfer_0251
so part of: sequence
location: complement(248715..249260)
location: region:248715-249260:-1
so has part: feature:248715-249260:-1:exon
subclass of: SO_0000010

position:248715:-1
position: 248715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249260:-1
position: 249260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248715-249260:-1:exon

RFER_RS01265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01265
old locus tag: Rfer_0251
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRKSHHVHVAPDVRMVAKIGLRVAVASFLGLLLVLILVSDGKASGYRQIISAFALSKVSLGPAMLVFGFALVSFAGITAWLFSIYASFRIAGPLYRISRNLELLINHGLVAPLPIRHTDSLQREWEEFEASVSALRAQHEELKQALGEVENALAPISEAEDSTALATGIARLKKAEQLVNL
SIO_010081: RFER_RS01265
subclass of: SO_0000673
so part of: RFER_RS01265
location: complement(248715..249260)
location: region:248715-249260:-1
so has part: feature:248715-249260:-1:exon

WP_011462581.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:248715-249260:-1:exon

RFER_RS01270
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01270
old locus tag: Rfer_0252
so part of: sequence
location: 249696..250364
location: region:249696-250364:1
so has part: feature:249696-250364:1:exon
subclass of: SO_0000010

position:249696:1
position: 249696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:250364:1
position: 250364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:249696-250364:1:exon

RFER_RS01270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01270
old locus tag: Rfer_0252
inference: COORDINATES: protein motif:HMM:NF025875.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c3 family protein
translation: MAIVYMLLLSPALYGGSVIGTRHDLSTAGTPQVCEFCHTPHGANTNLQAPLWNRAETTQVFTLYGSPTMNVAVGQPRVASRLCLSCHDGVNASTVVHGNSVSTKHDLVKPPGHPAPDMTSEPNCERCHSDMYGGKKRTLVLGTDLSNDHPISIDYPTAAQDSAFKAPTDAQKGWGGTSPNEVKLYAGAVECGSCHNVHSNDFAPFLRKSNAASALCTTCHAK
SIO_010081: RFER_RS01270
subclass of: SO_0000673
so part of: RFER_RS01270
location: 249696..250364
location: region:249696-250364:1
so has part: feature:249696-250364:1:exon

WP_166485625.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:249696-250364:1:exon

RFER_RS01275
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01275
old locus tag: Rfer_0253
so part of: sequence
location: 250521..251522
location: region:250521-251522:1
so has part: feature:250521-251522:1:exon
subclass of: SO_0000010

position:250521:1
position: 250521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251522:1
position: 251522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250521-251522:1:exon

RFER_RS01275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01275
old locus tag: Rfer_0253
inference: COORDINATES: protein motif:HMM:NF025890.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c3 family protein
translation: MLAEKAAAAPAGRASAPRSLVPLPAKPAPTSSHAPFEAGDCKICHQNADPKHPGPVFKKGPALCLDCHEEFNGVMKRAHTHAPARTDCTSCHNPHNSVFSKLLHLEPRALCVSCHEKIGKLHDSAKVPHKALTTGKYCSNCHNPHGSTVEKLLIQLPFDLCVNCHSVDTMADANGKKLQNIKAWLLDNPKQHGPVASKDCNDCHEPHGGDLFRLINQDYPPEFYAPYDAKNYGLCFGCHREKAFSTAQTATLTSFRNGATNLHYLHLQQSGRGRTCRACHEVHAAKQDHLIRDGVPYGSGGWILKLNYKKTATGGSCEKTCHAEKSYANRTAP
SIO_010081: RFER_RS01275
subclass of: SO_0000673
so part of: RFER_RS01275
location: 250521..251522
location: region:250521-251522:1
so has part: feature:250521-251522:1:exon

WP_166485626.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:250521-251522:1:exon

RFER_RS01280
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01280
old locus tag: Rfer_0254
so part of: sequence
location: 251525..252337
location: region:251525-252337:1
so has part: feature:251525-252337:1:exon
subclass of: SO_0000010

position:251525:1
position: 251525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252337:1
position: 252337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251525-252337:1:exon

RFER_RS01280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01280
old locus tag: Rfer_0254
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNIAALLVLVGLVAVFQPASAAHAAIGTPVASTEMPTLEGGKAQVMGNVEANVLVFFRPDQPRSAGALRELARCQKDFAGKSVRWVAVVPSSASLPGVMTLMRDTSFAAPVLLDNGDALYGSLGLDLHPVVVIVGRDQKLAAFEPFRVLDYCTVISARIRHVLREISDAELGAVLDPPKATQGGNEQVARRYRAFAEVQFKNKDYDKALVSVRKGLAKDPLLAPAHALLGQILLAQGNCADAVPAFNQALLLDGASTVARDGLERCKSAR
SIO_010081: RFER_RS01280
subclass of: SO_0000673
so part of: RFER_RS01280
location: 251525..252337
location: region:251525-252337:1
so has part: feature:251525-252337:1:exon

WP_011462584.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:251525-252337:1:exon

RFER_RS23255
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS23255
old locus tag: Rfer_0255
so part of: sequence
location: 252623..253312
location: region:252623-253312:1
so has part: feature:252623-253312:1:exon
subclass of: SO_0000010

position:252623:1
position: 252623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253312:1
position: 253312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252623-253312:1:exon

RFER_RS23255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS23255
old locus tag: Rfer_0255
inference: COORDINATES: protein motif:HMM:NF021235.2
GO function: GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c3 family protein
translation: MKSQLRCLKWAGLAAASLLLTLGATSAQAAIGTIVGSVHDFSTTGPNATYKGTSTQVCIYCHAPHNTGSTLLWNRATNGATYSLYSSTVSSTMNATTGQPGAVSKLCLSCHDGTVAIDSFGGATGSKMVTGAPLLGTDLSNDHPIGFPYNAALVTADPGLRAVSTAATIGTGNVGTIESKMLFGASGAATVECASCHDVHNSTSGTAVQAKLLKVTTVGSALCTTCHIK
SIO_010081: RFER_RS23255
subclass of: SO_0000673
so part of: RFER_RS23255
location: 252623..253312
location: region:252623-253312:1
so has part: feature:252623-253312:1:exon

WP_011462585.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:252623-253312:1:exon

RFER_RS01290
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01290
old locus tag: Rfer_0256
so part of: sequence
location: 253580..254734
location: region:253580-254734:1
so has part: feature:253580-254734:1:exon
subclass of: SO_0000010

position:253580:1
position: 253580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:254734:1
position: 254734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:253580-254734:1:exon

RFER_RS01290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01290
old locus tag: Rfer_0256
inference: COORDINATES: protein motif:HMM:NF013595.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NHL repeat-containing protein
translation: MPNSSTTMFLPTRLRFFSALLGALMLLSGCVTQPTKAPLQKEAVFYPRAPDAPRVQHLATFASARDLETAKESGGLKDFLLGEEKVEDALVRPYGVAMSDSKIYVADSRGPGLAVFDLKTRKFSLMSGSGAGRMQRPINVAIDADDTKYVTDTARNQVLVYDKGDRYLAAYGGKDEFKPVDVAIAGDRLYVVDIEHHEVQVLDKRSGKLQFKFGKSDVDKEKSLHQPTNLAVGRDGDIYVVETGNFRVARFTPEGKFVRHYGEAGQAPGQFARPKGIAMDRSGRMYVSDAAFQNVQIFDGQGRVLMAFGQPGGDLPGLNLPAGVAIDYDNVALFRSLADPKFSIEHLILVVSQFGPNQVDVFGFGKMAGVDYPQDEKLESKPVP
SIO_010081: RFER_RS01290
subclass of: SO_0000673
so part of: RFER_RS01290
location: 253580..254734
location: region:253580-254734:1
so has part: feature:253580-254734:1:exon

WP_011462586.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:253580-254734:1:exon

RFER_RS01295
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01295
old locus tag: Rfer_0257
so part of: sequence
location: 254793..256850
location: region:254793-256850:1
so has part: feature:254793-256850:1:exon
subclass of: SO_0000010

position:254793:1
position: 254793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:256850:1
position: 256850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254793-256850:1:exon

RFER_RS01295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01295
old locus tag: Rfer_0257
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPNRAACLITRLAIGVALLPVVSSCWAQASAPLRLKSASEIAPFRIIGIDGYVKARYLTDDSSSVGAAGGTPVRATQSNLSEEIYLMTHSYIYHPSLLLLDLGGGPIIDKSQDGGDGVGTSARRQMFNLNGRATFLRDKPYTGAFFYDRSNQTQSMGPAQQMFNENTRYGATFSLLSPVTPVPMQVELTRSTSQGKGAEQVMDDRIDQLRIKMDATISKLGGSTFQFVGTRQDSASGSSGLPIQASRSASDRANLDTRLKFGSTNEYELSNAVALNRSSFTGGQGSLANQKDASFGLDLRGRHSEELQTYGRYNVNASRQDGQSMTLNAASAGLSYRVNPDLSGALAVRGEVNRASQLSSTFYAIDGSAQYRQTLPLGQATAGYNVSYSQRDQQATSLQTKMLGEHVTLGSTSFVSLSKPQIIASTVVVTNLTRTQTFVEGGDYLLSQIGLELRIQRLIGGNILDGQEVLIDYDYSSGGSYAASQLDNTLSLSWSYKSYLNFFVRHLASTPRLESGSPTSPLNSVNSTFYGARTDIPLSLLTQEFLLGGSAEREVRRETISSYRRANLEAYVQTDLPLVRSGNIHIGARQMQVNYEDSPLQAVKLTAVDIRLWARIGYGIDLSAEASRHRDTGAPELREGSAASVRAQWRQRKLLWTLDLTRVHDAQGLAERTRTYGQLLLRRDF
SIO_010081: RFER_RS01295
subclass of: SO_0000673
so part of: RFER_RS01295
location: 254793..256850
location: region:254793-256850:1
so has part: feature:254793-256850:1:exon

WP_011462587.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:254793-256850:1:exon

RFER_RS01300
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01300
old locus tag: Rfer_0258
so part of: sequence
location: 256853..257884
location: region:256853-257884:1
so has part: feature:256853-257884:1:exon
subclass of: SO_0000010

position:256853:1
position: 256853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:257884:1
position: 257884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256853-257884:1:exon

RFER_RS01300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01300
old locus tag: Rfer_0258
inference: COORDINATES: protein motif:HMM:NF028479.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 6-bladed beta-propeller
translation: MTRAYRFAMALGLLLALGVLGACAPLPPKPADQAPLAWPDLPNPPRITFVRQFSKPDDFSIGKGFFQRLGDLLFGARGERLIRPLAVVTNNGVVFVADPGANGVHRFDQTKARYDLIVGEGGQALPSPVALALGSAGEVYLTDSNRAQVLVIQPGAAMATPLALPDMAQPTGIAFDKSNGNLYVVDTGAHRVNVFKPDGTLVFSFGARGDGAGQFNYPTMIWFDRGGRLYVTDSLNFRIQMFSRNGKYLSGFGQVGDGLGDNIRPKSVATDSHGHVYVVDALHNALQIFDVLGRYLLSVGSIGNDRGEFWLPAGIFIDENDLIYIADSYNQRVQVFRYIGGPS
SIO_010081: RFER_RS01300
subclass of: SO_0000673
so part of: RFER_RS01300
location: 256853..257884
location: region:256853-257884:1
so has part: feature:256853-257884:1:exon

WP_011462588.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:256853-257884:1:exon

RFER_RS22865
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS22865
old locus tag: Rfer_0259
so part of: sequence
location: 257881..259638
location: region:257881-259638:1
so has part: feature:257881-259638:1:exon
subclass of: SO_0000010

position:257881:1
position: 257881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259638:1
position: 259638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257881-259638:1:exon

RFER_RS22865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS22865
old locus tag: Rfer_0259
inference: COORDINATES: protein motif:HMM:NF021235.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c3 family protein
translation: MIKHQFAALAAAATMVLLLWAGAPAQSASIVANKHNLSATGPGTIKATSEGEVCVFCHVPHNSRATGPLWNRDQPVGSYTPYTSSTRKISAPGQPTGASLLCLSCHDGTIALGKVSSRTANIAIAGGKNNFLLGDQSYIGTDLSDDHPVSFLYSSVLSNTELRTPTGAVKLDASGQMQCTSCHSPHDNANGKFLVVSNIKSGLCTNCHNKSYWAASDHQTSTKTWNGVGTNPWLHTTNTPQNVTNNACESCHRPHTAPGRQQLLNSATEETNCLVCHSGTVATSAKNIQIELNKTSQHSVGAYLNVHDAGEANLMTTAHVECQDCHNPHSANSTAGSAPGTTPIALPGSLSNVRGITISGAAVSPVTAEYQICLRCHGDSTSRTPASRTARVIVQTNTRLEFDTANPSYHPIAGVGKATGVTGKTVPSLIAPWTTTSVMNCSDCHNNNAGPNTGGTGPNGPHGSTNPLLLERSYVVTDPATESAANYALCYKCHSRTAIIGTGAGSFKEHNKHIVGETTSCNVCHDPHGISSTQGTALSNSRLINFQTGVVTKSGAQAIRWERVGTTGGRCYLSCHGKDHNGLSY
SIO_010081: RFER_RS22865
subclass of: SO_0000673
so part of: RFER_RS22865
location: 257881..259638
location: region:257881-259638:1
so has part: feature:257881-259638:1:exon

WP_049765595.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:257881-259638:1:exon

RFER_RS23835
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS23835
old locus tag: Rfer_0260
so part of: sequence
location: 259727..260365
location: region:259727-260365:1
so has part: feature:259727-260365:1:exon
subclass of: SO_0000010

position:259727:1
position: 259727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260365:1
position: 260365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259727-260365:1:exon

RFER_RS23835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS23835
old locus tag: Rfer_0260
inference: COORDINATES: protein motif:HMM:NF025890.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c3 family protein
translation: MKNTPSLKASLAWALALTFTFALPVLAQNRDKDKDKDKACLECHAAVAQKKVVHAAVHMGCNSCHNEVELNTVPHKSRSKTAKERSAENAAMCANCHDKKLFEGKVVHAPIAAGECNDCHDPHASDNLGLLKKEPATLCLDCHPDIKKGPHVVAGFTRSGHPLGDEKKEAKDPLRSGKKFYCGSCHEPHSSERPKLNRFGLGMVACQKCHEK
SIO_010081: RFER_RS23835
subclass of: SO_0000673
so part of: RFER_RS23835
location: 259727..260365
location: region:259727-260365:1
so has part: feature:259727-260365:1:exon

WP_011462590.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:259727-260365:1:exon

RFER_RS01315
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01315
old locus tag: Rfer_0261
so part of: sequence
location: complement(260475..263909)
location: region:260475-263909:-1
so has part: feature:260475-263909:-1:exon
subclass of: SO_0000010

position:260475:-1
position: 260475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263909:-1
position: 263909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260475-263909:-1:exon

RFER_RS01315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01315
old locus tag: Rfer_0261
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010398534.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF748 domain-containing protein
translation: MARQSLQWTNIRWKRWVAGAAGLLAAYTVAGFWLVPPLIKHQVPQFGQTELARQATIGEVRFNPFTLRLEAQDLRLAEADGTPLFAVGKLAVALQWKSLIRRAWSFSDIRITAPSANLAIAPDGKFNLAELLATLERRPHEASTDASLPRVIVEQLALEQGTVDMHDRRAGYDNTFAPIDFSLSNFSTLPEQNDAHTFTAQSARGGKMRWKGTASVNPIRASGEVTLENASLPELAVYLKSYTRARVAAGQLSATLPYSLSYADGKFEASLEGAKVSLRDLALAREGVTDSFAALTRLDINDVNADLARRQVTVGEVRADGGKLSVKRDAKGELDLTNLMIASAGPAASGPAAAVAVNNWKLAVKQVLFDQMAVSAVDETAKPPLKLNAGKVRLQLQVAAEQAGANFQLKLSQAALSLAGLTLASGAQAPFKLAQLGFSDGMLDLAARQASIGRLYAEGGQLQLVRARDGKLNLMELLPRSSAIGPQAAAAAGKPWVAVAKTVELSKFGADVADEGAGVKVQVTDLALKLEGASSDLKQTVKFNTDLKLREGGQFTAQGSVVPANGEVQADVRLKQLALAPLQPLLAHYLKLKIARGNVSAQGLLTTGAGTAKSPSLRYVGALNVAGLTLNEEDGGLFAAWKNASADKFTASLNPNRLDVPELRIVEPNATLIIEDDRSFNAARLLVQPNAGAKVEVPTQAKAKADDDPFPVRIRRLRLQNAKLDFTDLSLRPQFSAKIYELNGVINGLSSNREARSQIELDGRVDEFGLARIRGELNPFAPRNNTDINVVFKNVDMVPASPYSMKFAGYKVAEGKISLDLQYKIRDSQLEGANQIVIDKLTLGERVDSPDALKLPLQLAIAILKDSEGRIDLGLPISGNLSDPQFSYGAIIWKAIGNLLTRIVTAPFRALGSLLGVSGEKLESIDFDAGSDRLLPPEREKLKQVAQILGKRAQLKLSVPAQYSETADGAALRAGAVRVEIARRAGIKLQAGEEPGPLNLSDRAVRGAMRDLYAERFGEAELDKQKKAAEGGGAPAAAASMPDTKTAAAQAKLPLWQRVGKMIQGEPQVADASAFYNQLQERLNQNQPLAADALAKLGAQRAEAILAALKEAGVDPARADAAAPEKVESDIGKPVPLKLGLVAK
SIO_010081: RFER_RS01315
subclass of: SO_0000673
so part of: RFER_RS01315
location: complement(260475..263909)
location: region:260475-263909:-1
so has part: feature:260475-263909:-1:exon

WP_011462591.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:260475-263909:-1:exon

RFER_RS01320
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: pta
locus tag: RFER_RS01320
old locus tag: Rfer_0262
so part of: sequence
location: complement(264127..266178)
location: region:264127-266178:-1
so has part: feature:264127-266178:-1:exon
subclass of: SO_0000010

position:264127:-1
position: 264127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266178:-1
position: 266178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264127-266178:-1:exon

RFER_RS01320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: pta
locus tag: RFER_RS01320
old locus tag: Rfer_0262
EC number: 2.3.1.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010258038.1
GO function: GO:0016407 - acetyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphate acetyltransferase
translation: MRTYFLAPTQPNVGLTSVSLGLLRALQRRGLKVAFVKPITKRTADTEPSVLFARSICHLQNTPDPLPMSLVTQRVSSGQTDELLEEIVSLAMSCTKEADVLLVEGIHADPSRIFIPRLSGQIARSLQADVVLVASAADAQGIAETNYLIAQIRNVGRNVVGVIFNRAPADFDEAAAAMQLDGVPIWGVVKNNPALSAPRMIDVARHLGAEVMIEGDIATRRMLETVLCGRSVAEVIPRLKPGTLVVTAGDRDDVILATALAASNGVELAGLMLTHHSAISPRIERFASLAFHSGLPVLRTDGDSYETAASISRLPLAVPQDDLARMDNVIESVAEQLDGNMIFAGLERAAPARVSPPAFRHQLIQKARAANKRIVLPEGDEPRTIRAAVICTEKGIARCVLLGKRKVIHSVADALGIELPKGLEILEPSEIAERYVAPMVELRKSKGLTPGQALVALEDTVVLGTMMLAVGEVDGLVSGAVHTTASTVRPALQLIKTAPGSSIVSSCFFMLMPEQVLVYADCAINPNPTAQELADIAKQSADSALAFGIEPKVAMISYSTGESGSGDDVEKVRTATALAHARWPELVLDGPMQYDAAAVREVGEQKAPGSAVAGQATVFIFPDLNTGNTTYKAVQRSAKVVSVGPMLQGLRKPVNDLSRGALVDDIVFTIALTAIQAEAMARQ
SIO_010081: RFER_RS01320
subclass of: SO_0000673
so part of: RFER_RS01320
location: complement(264127..266178)
location: region:264127-266178:-1
so has part: feature:264127-266178:-1:exon

WP_011462592.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:264127-266178:-1:exon

RFER_RS01325
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01325
old locus tag: Rfer_0263
so part of: sequence
location: complement(266435..266890)
location: region:266435-266890:-1
so has part: feature:266435-266890:-1:exon
subclass of: SO_0000010

position:266435:-1
position: 266435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266890:-1
position: 266890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266435-266890:-1:exon

RFER_RS01325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01325
old locus tag: Rfer_0263
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007872005.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MarR family transcriptional regulator
translation: MDEITKISFVEEVDTSYLETLMGYNSRRAALAIIGVFLERMAKYELRPVDFSVLSLVSHNPGITSRQLCNALGVLAPNLVGMVTALEKRGLITRCPHPHDGRAMGLHLTEDGKTLLKAAEETASKLEFDCTPNLSSAERKTLIRLLKKIYK
SIO_010081: RFER_RS01325
subclass of: SO_0000673
so part of: RFER_RS01325
location: complement(266435..266890)
location: region:266435-266890:-1
so has part: feature:266435-266890:-1:exon

WP_011462593.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:266435-266890:-1:exon

RFER_RS01330
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01330
old locus tag: Rfer_0264
so part of: sequence
location: complement(267006..268715)
location: region:267006-268715:-1
so has part: feature:267006-268715:-1:exon
subclass of: SO_0000010

position:267006:-1
position: 267006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268715:-1
position: 268715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:267006-268715:-1:exon

RFER_RS01330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01330
old locus tag: Rfer_0264
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011484027.1
GO function: GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyl-CoA dehydrogenase family protein
translation: MRYEPPLQDIQFILHEVLNAPACLQSLPTFAEVDADLMHQVLDEAGKFVGEVIAPLNRSGDEVGCQFANGQVTTPPGFKAAYQAFWQAGWPALACAVEDGGQGLPGLLEAVLYEMLSAANHGWTMAPGLLHGAYECVKHHASDELKTRYLGKIATGEWLATMCLTEPQAGSDLGLVRTKAQPQADGSCRLSGTKIFISGGEHDLTDNIVHLVLARLPDAPPGPKGLSLFLSPKFMPDGARNPVHCERIEEKMGLHGSATCVMRFDEATGWIVGEPGRGLNAMFVMMNAARLHVGLQGIGLLDAAWQKADAYAKERRQMRAPVRGTSAAEADLIVEHPAMRRILDTQRAWIDGGRVLAYKTALELDVIKHHPNSKRKAEAERWCSLVTPVLKAAWTAQAFNGASDCLQVFGGHGYVREWGIEQIVRDSRVAMIYEGTNEIQAIDLLVRKVLPDGGAGLTALLQQLSDDLVCSEVADKAFQTQVTVLCDLTRQLVAASALDRQLPYWVADDYLHAVAMTLLAWAWSQIRPAVPADVQGSDAARWLLPAAALQLWILPGFAMRVQIVADRLP
SIO_010081: RFER_RS01330
subclass of: SO_0000673
so part of: RFER_RS01330
location: complement(267006..268715)
location: region:267006-268715:-1
so has part: feature:267006-268715:-1:exon

WP_011462594.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:267006-268715:-1:exon

RFER_RS01335
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01335
old locus tag: Rfer_0265
so part of: sequence
location: complement(268733..269854)
location: region:268733-269854:-1
so has part: feature:268733-269854:-1:exon
subclass of: SO_0000010

position:268733:-1
position: 268733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269854:-1
position: 269854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268733-269854:-1:exon

RFER_RS01335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01335
old locus tag: Rfer_0265
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011484026.1
GO component: GO:0009279 - cell outer membrane [Evidence IEA]
GO function: GO:0015288 - porin activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: porin
translation: MKISSLITLSGLLATGAVQAQTQSATLYGMIDTGVEAVSNVSGAGTLTRMPSTTGILPSRLGFRGKEDLGGGLSAVYTLEMGFAPDTGASGQGGRLFGRQSTVGFSGDWGAVTLGRQWTMLFWSILDSDIVGPAVYGLGSLDSYIPNSRIDNSLAYKGKFGNVTVGGTYSLGRDTVNAGPSPAGTNCAGESGADTQACREWSALVKYDTASWGAAVAYDSLNGRTPASGTDVVLPAGLTSSAKSDARLMLNGYVKFSDVKLAGGVIRRTNDGSATKPKSDLWYVGASYPLSPAWTIDGTYAKLSYKDIANFDSSLLVVRSLYKMSKRTTLYVQLGGISNDSLANVSVSGGAPGSNPALGDSQTGVMLGMNHAF
SIO_010081: RFER_RS01335
subclass of: SO_0000673
so part of: RFER_RS01335
location: complement(268733..269854)
location: region:268733-269854:-1
so has part: feature:268733-269854:-1:exon

WP_011462595.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:268733-269854:-1:exon

RFER_RS01340
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01340
old locus tag: Rfer_0266
so part of: sequence
location: complement(269984..270733)
location: region:269984-270733:-1
so has part: feature:269984-270733:-1:exon
subclass of: SO_0000010

position:269984:-1
position: 269984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270733:-1
position: 270733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269984-270733:-1:exon

RFER_RS01340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01340
old locus tag: Rfer_0266
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008332226.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MKPPVLTVKGLRAGYGRAEVLHGIDLQAFQGSVITVIGPNGAGKSTFLNALMGVLPAQGQIEFEGQPINTLSLEERVMLGIALVPEKRELFGSMSVEDNLVLGAFRQVRLRNPKWREQMDVVFDLFPRLKERRTQAAGTLSGGERQMLAVGRAMMSRPTLLMLDEPSLGLAPLVVKEIFRTIDTLRKTGVTTLLVEQNARAALEAADDGYVLEMGEIALHGPAQDLATDPRVIDTYLGAARKKDTATRP
SIO_010081: RFER_RS01340
subclass of: SO_0000673
so part of: RFER_RS01340
location: complement(269984..270733)
location: region:269984-270733:-1
so has part: feature:269984-270733:-1:exon

WP_011462596.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:269984-270733:-1:exon

RFER_RS01345
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01345
old locus tag: Rfer_0267
so part of: sequence
location: complement(270735..272531)
location: region:270735-272531:-1
so has part: feature:270735-272531:-1:exon
subclass of: SO_0000010

position:270735:-1
position: 270735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272531:-1
position: 272531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270735-272531:-1:exon

RFER_RS01345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01345
old locus tag: Rfer_0267
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007877156.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: branched-chain amino acid ABC transporter ATP-binding protein/permease
translation: MSFTTQLQHWAHNAKIQRVVVVACMLLYAVSPVPEFWITQLNYIALYSLVILGLVLLTGIGGLTSFGQAAFVGIGAYTSAYLTVHMGWSPWLTVFAGLFITGISALVVGWITLRMSGHYLPLATIAWGLSLYYLMGNLDALGKYDGILGVPALTVWGWDISQGRSFFVLAWGMVLFAAFALLNLMDSRTGRAIKAMRASTLMAEAMGVDTLRHKVGIFLIAALFASLSGWLFAHFQRTVNPSPFGLKMGIEYLFMTVLGGAGYVWGAISGAVMTKLLEDELQVLLPKLLGTSGSYEVIVFGIVLVLVLKYLPDGVWSLVGRFLPKPNRVEDWHAAAALPERAKPALGDTVLEVKDIRKQFGGLTAVNNIGFSIQAGQIVGLIGPNGAGKSTTFNLITGVLGLSSGEVKFRGQTISGLPSREIARRGMSRTFQHVKMIPEMTVLENVALGAQLRGSKGALSSMLRLDRAEEQSLLREAARQLERIGMGHAMHELAGNLAMGPQRLLEIARALCSDPALLLLDEPAAGLRHKEKQALAAVLRQLRSEGMSILLVEHDMDLVMDVTDHIVVMEFGTLLMQGTPEEVQQSPKVRAAYLGVEH
SIO_010081: RFER_RS01345
subclass of: SO_0000673
so part of: RFER_RS01345
location: complement(270735..272531)
location: region:270735-272531:-1
so has part: feature:270735-272531:-1:exon

WP_011462597.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:270735-272531:-1:exon

RFER_RS01350
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01350
old locus tag: Rfer_0268
so part of: sequence
location: complement(272533..273570)
location: region:272533-273570:-1
so has part: feature:272533-273570:-1:exon
subclass of: SO_0000010

position:272533:-1
position: 272533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273570:-1
position: 273570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272533-273570:-1:exon

RFER_RS01350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01350
old locus tag: Rfer_0268
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011800215.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO process: GO:0015803 - branched-chain amino acid transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: branched-chain amino acid ABC transporter permease
translation: MDFSIASILLLDGITNGAVYALLGLATVLVFSVTRVIFIPQGEFVAYGALTLAIFQTGKVPGTVWLLLIMAVLAALMDARLSWQHTGDAKRALKAGLSALAAPLVVSLLSIWAAPHQLPLLVQALLTVAIVTAFGPLVYRLAYQSLADASSLVLLIVSVGVHFAMTGLGLLFFGAEGFRNPSFWDERLNLGPLAITGQAIIIVLTSLAMIVLLWQFFNRTLYGKALQATAVNRLGARLMGISTHGAGQATFAMAALIGALSGLLIGPTTTVFYDSGFLIGLKGFVAAVMGGLHSYPLAALGALFVGLVESFGSFWASAFKEVIVFTLVLPILLWRSVAGGNEEEH
SIO_010081: RFER_RS01350
subclass of: SO_0000673
so part of: RFER_RS01350
location: complement(272533..273570)
location: region:272533-273570:-1
so has part: feature:272533-273570:-1:exon

WP_011462598.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:272533-273570:-1:exon

RFER_RS01355
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01355
old locus tag: Rfer_0269
so part of: sequence
location: complement(273660..274793)
location: region:273660-274793:-1
so has part: feature:273660-274793:-1:exon
subclass of: SO_0000010

position:273660:-1
position: 273660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274793:-1
position: 274793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273660-274793:-1:exon

RFER_RS01355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01355
old locus tag: Rfer_0269
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011800214.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MKAFKTLIATAAAALVTGSALADITIGISLPLSGPASGLGIPMGNQIKLWPTSIAGEKLKVIVLDDATDPTNGVKNAKRFVTEDKADIIMGSAATPVAIPMAAVAAEAETVQIAFSPAVLPPGKDAWTFRLPQSNDVMAHAMVALMKKQGVKTVGFLGYTDAYGESWLKEFTAQANANGIKLIGTERFARSDTSVTAQALKLVAANPDAMLIVASGSGAAMPHMAVVDRGYKGKIYQTHAAASRDLMRVGGKAVEGAYVVSGPAVIAEQLPDSHPSKKVAIDFVQQYEKAYGPGSRNQFAGHSYDAVLILEKVVPVALKKGKPGTKEFRAALRDAMETMGRTVVSHGVLNWTHDNHWGFTNETGVMLKVVNGDWKVE
SIO_010081: RFER_RS01355
subclass of: SO_0000673
so part of: RFER_RS01355
location: complement(273660..274793)
location: region:273660-274793:-1
so has part: feature:273660-274793:-1:exon

WP_011462599.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:273660-274793:-1:exon

RFER_RS01360
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01360
old locus tag: Rfer_0270
so part of: sequence
location: complement(274861..275277)
location: region:274861-275277:-1
so has part: feature:274861-275277:-1:exon
subclass of: SO_0000010

position:274861:-1
position: 274861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275277:-1
position: 275277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274861-275277:-1:exon

RFER_RS01360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01360
old locus tag: Rfer_0270
EC number: 3.1.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019430319.1
GO function: GO:0016790 - thiolester hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyl-CoA thioesterase
translation: MSKTVVYEVNVMFGDCDPAGIVFFPNFAKWMDASSLNFFIQSGVPPWRELVKTTGIIGTPLLEINTKFLRPATYGETLQIHTSIEEWRDKVFVHRHLIKRGDELLCEGTEVRAFCMRLPDSDRIKAIPVPADIKALCC
SIO_010081: RFER_RS01360
subclass of: SO_0000673
so part of: RFER_RS01360
location: complement(274861..275277)
location: region:274861-275277:-1
so has part: feature:274861-275277:-1:exon

WP_011462600.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:274861-275277:-1:exon

RFER_RS01365
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01365
old locus tag: Rfer_0271
so part of: sequence
location: complement(275287..276051)
location: region:275287-276051:-1
so has part: feature:275287-276051:-1:exon
subclass of: SO_0000010

position:275287:-1
position: 275287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276051:-1
position: 276051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275287-276051:-1:exon

RFER_RS01365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01365
old locus tag: Rfer_0271
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010466903.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family NAD(P)-dependent oxidoreductase
translation: MNIQGQAALVTGGGSGLGEATARELARLGAKVAILDVNLANAEKVAAEIGGVACQCDVTSPDSVQAAIDTATAAHGPARILMQIAGIGSAKRVVGKDGNAAPLEDFVRVVNVNLIGTYNVARLFAAACAKLEPMEDGERGAMVFTASVAAFDGQVGQQAYSASKAGVAGMTLPMARDLAQHGIRVCTIAPGLFATPLMKTLPEAVQVSLAASIPFPQRLGKPEEFAQLAAHIVSNCHLNGEVIRLDGALRMAPR
SIO_010081: RFER_RS01365
subclass of: SO_0000673
so part of: RFER_RS01365
location: complement(275287..276051)
location: region:275287-276051:-1
so has part: feature:275287-276051:-1:exon

WP_011462601.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:275287-276051:-1:exon

RFER_RS01370
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01370
old locus tag: Rfer_0272
so part of: sequence
location: complement(276153..277403)
location: region:276153-277403:-1
so has part: feature:276153-277403:-1:exon
subclass of: SO_0000010

position:276153:-1
position: 276153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277403:-1
position: 277403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276153-277403:-1:exon

RFER_RS01370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01370
old locus tag: Rfer_0272
EC number: 2.3.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019430317.1
GO function: GO:0016746 - acyltransferase activity [Evidence IEA]
GO process: GO:0006635 - fatty acid beta-oxidation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thiolase family protein
translation: MASKGFFNAFDDIWMLDGMRTPLVDYCGALGHISPTDLGIKAARAALERAAVPAAHINSVLTGNMAPGDFEQFMLPRHIGLYAGVPQDVPALMAQRICGTGFELFRQAGEQIESSCADVTLVVGTESMTRNPIAAFEHRTGFKLGAPVGFKDYMWEALNDSAAGINMIQTAENLAKQYGITREEVDAFASSSFAKAVAAQQSGFHAGEIVPVVSENFALEGYATRAIKLQGKSSEVALDTHARISPVEVLAKLRSVYPGGVQTGGNSAALVDAAAAVVVASGGYVRAEGKKPLARVVAAAVVGVPPEIMGIGPAPAIRLLLERAGLTLDQIGRFEINEAQGAQTLSVGRELGLDLSKLNVNGGAIALGHPLACTGVRLTLTLAREMQRSHVRYGVSSACIGGGQGIALLLENPLTV
SIO_010081: RFER_RS01370
subclass of: SO_0000673
so part of: RFER_RS01370
location: complement(276153..277403)
location: region:276153-277403:-1
so has part: feature:276153-277403:-1:exon

WP_011462602.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:276153-277403:-1:exon

RFER_RS01375
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01375
old locus tag: Rfer_0273
so part of: sequence
location: complement(277417..279276)
location: region:277417-279276:-1
so has part: feature:277417-279276:-1:exon
subclass of: SO_0000010

position:277417:-1
position: 277417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279276:-1
position: 279276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277417-279276:-1:exon

RFER_RS01375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01375
old locus tag: Rfer_0273
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011484021.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: feruloyl-CoA synthase
translation: MTEPKFRPLTFGVTRVDLRDGAPGVHYLKAEQALQDYPERITDRLAHWAATAPDRIYIAQREKLPDGSKGEWKCITYGQAWRHARCIAQALIHRGLSTKNPVVILSENDLEHALLALGCLVAGVPFVPTSPAYSLVSVDYDKLRHVIKTVTPGLVFAADATRYAKAINAALPADIEVVLTQGQIDGRDHTTFADLLNTPVTPAVDAAMQATGPDTIVKFLFTSGSTSLPKAVINTQRMWCANQQQMAQSMPVLAQEPLVLVDWLPWNHTFGGNHNFGMVLYHGGTLYIDDGKPTPALMAETLRNLREIAPTVYFNVPTGFEAIAAAMQTDDVLRKNLLSRVKMFFYAGAAMAQPIWDSLFESEEREIGERIVMSTGLGMTESGPFAIFVTNPNVKAGDLGVPTPGMDLKLVDVDGKTEVRYRGPNITPGYWRAPNETAKHFDEEGYFCSGDAVKWIDETDVHQGLKFDGRIAEDFKLATGTFVSVGPLRAKIIAAGAPYIQDVVLTGINLKEVGAMVFPTQAVRALSGLPASTPMADVLTRAPVLDQFQKVMNELNKIATGSASRIARMCLLAEPPTLDRGEVTDKGSINQRAVLTHRAETVAALHDDSLASILKPQSL
SIO_010081: RFER_RS01375
subclass of: SO_0000673
so part of: RFER_RS01375
location: complement(277417..279276)
location: region:277417-279276:-1
so has part: feature:277417-279276:-1:exon

WP_011462603.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:277417-279276:-1:exon

RFER_RS01380
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01380
old locus tag: Rfer_0274
so part of: sequence
location: complement(279359..280141)
location: region:279359-280141:-1
so has part: feature:279359-280141:-1:exon
subclass of: SO_0000010

position:279359:-1
position: 279359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:280141:-1
position: 280141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279359-280141:-1:exon

RFER_RS01380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01380
old locus tag: Rfer_0274
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007871990.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: crotonase/enoyl-CoA hydratase family protein
translation: MDKKHIHFELYGEQQEVAIIRLTRGSKRNALNDGLILALRGLFEKMPASVRAAVIDGEGEHFCAGLDLSELQERDASQGVFHSRMWHAALEHVQYGPVPVIAALHGAVVGGGLELASACHIRVADDTTFYALPEGSRGIFVGGGGAVRIPRLIGTARMTDMMLTGRVFNAQDGERIGLAQYLVPAGTAFDKACELAVRIAGNAPMTNYALTHVLPRIADQPADQGFMTEAMMAAIAQSAPAAKERVRAFLEGRADKVRIA
SIO_010081: RFER_RS01380
subclass of: SO_0000673
so part of: RFER_RS01380
location: complement(279359..280141)
location: region:279359-280141:-1
so has part: feature:279359-280141:-1:exon

WP_011462604.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:279359-280141:-1:exon

RFER_RS01385
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01385
old locus tag: Rfer_0275
so part of: sequence
location: 280255..281118
location: region:280255-281118:1
so has part: feature:280255-281118:1:exon
subclass of: SO_0000010

position:280255:1
position: 280255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281118:1
position: 281118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280255-281118:1:exon

RFER_RS01385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01385
old locus tag: Rfer_0275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013543432.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4-hydroxyphenyl-beta-ketoacyl-CoA hydrolase
translation: MDVKNLVAIDIHTHAEVSCWNPFDSYGEEYDRAADKYFRNSRRPTIAETIAYYRERKIGLIMFTVDAETQMGRRRIPNEEIAEAAKANSDMMMAFASIDPHKGKMGAREARKLIEEFGIKGFKFHPTVQGYHPYDKMAWPIYEVIAEYKMPAIFHTGHSGIGSGMRCGGGLRLAYSNPMHLDDVAVDFPDMQIVMAHPSFPWQDEALSVATHKPNVWIDLSGWSPKYFPKQLVQYANTLLKDRILFGSDYPLITPDRWMKDFEEAGFKPEVMPGILKDNAVRLLGLG
SIO_010081: RFER_RS01385
subclass of: SO_0000673
so part of: RFER_RS01385
location: 280255..281118
location: region:280255-281118:1
so has part: feature:280255-281118:1:exon

WP_011462605.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:280255-281118:1:exon

RFER_RS01390
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01390
old locus tag: Rfer_0276
so part of: sequence
location: 281156..281860
location: region:281156-281860:1
so has part: feature:281156-281860:1:exon
subclass of: SO_0000010

position:281156:1
position: 281156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281860:1
position: 281860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281156-281860:1:exon

RFER_RS01390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01390
old locus tag: Rfer_0276
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNPSTILPQADVLDHAGLNRQHVFDLAALPPDLVAPLEPVPHERQLILFGHAGRRLWECVQAEGIHSAHPIDEYSVRTVERWLAQALPQVRSRVVFPGAQRIGLQRLGAIAGWHRAAPFMVGIDSVWGSWFAYRVAILTDTALPPSAPIDNGYPCDSCVNKPCISACPAGALVSGSFNLQACNTGRLAADSDCALGCTARSACPVGAEHRYDESQIRHSAAGSLATIRSYPACP
SIO_010081: RFER_RS01390
subclass of: SO_0000673
so part of: RFER_RS01390
location: 281156..281860
location: region:281156-281860:1
so has part: feature:281156-281860:1:exon

WP_011462606.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:281156-281860:1:exon

RFER_RS01395
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01395
old locus tag: Rfer_0277
so part of: sequence
location: complement(281882..282772)
location: region:281882-282772:-1
so has part: feature:281882-282772:-1:exon
subclass of: SO_0000010

position:281882:-1
position: 281882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282772:-1
position: 282772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281882-282772:-1:exon

RFER_RS01395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01395
old locus tag: Rfer_0277
EC number: 1.6.5.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014428279.1
GO function: GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MTSTLLVTGASGHLGQRVIHHLLETLKVAPQRIIATTRKPETLKDLAAKGITVRGADFDDAASLRSAFAGADRLLLISTDALDRPGRRLAQQQAAVAAAQQAGVAHVVYTSMPLPENSPLLIAPDHAGTEKALASSALKGWTLLRNHWYFENLFMWLPSALASGQWYSAAEQGKVAHIARDDLARAAAAALLKDTGKNTYTLSGAEAFTTEQIAQQVSQATGKPLQVVPVPLAGLIQGMVSAGFPEPLAAVFASFDTNTAAGRVAEVTGDFQKLTGVAPQPFAGWLSANAAALAAL
SIO_010081: RFER_RS01395
subclass of: SO_0000673
so part of: RFER_RS01395
location: complement(281882..282772)
location: region:281882-282772:-1
so has part: feature:281882-282772:-1:exon

WP_011462607.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:281882-282772:-1:exon

RFER_RS01400
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01400
old locus tag: Rfer_0278
so part of: sequence
location: 282960..283346
location: region:282960-283346:1
so has part: feature:282960-283346:1:exon
subclass of: SO_0000010

position:282960:1
position: 282960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283346:1
position: 283346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282960-283346:1:exon

RFER_RS01400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01400
old locus tag: Rfer_0278
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009856201.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MAVHKSKVDWAERCPIRDVLERMGDRWSMLVLFTLGDHQSLRFSVLKTTIGDISQRMLSQTLRRLEQDGLVLRTAHATVPPRVDYELTALGQSFLLPMRNLLHWAEQNHQQVRDARVAYVPPPRHEAL
SIO_010081: RFER_RS01400
subclass of: SO_0000673
so part of: RFER_RS01400
location: 282960..283346
location: region:282960-283346:1
so has part: feature:282960-283346:1:exon

WP_011462608.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:282960-283346:1:exon

RFER_RS01405
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01405
old locus tag: Rfer_0279
so part of: sequence
location: 283566..284042
location: region:283566-284042:1
so has part: feature:283566-284042:1:exon
subclass of: SO_0000010

position:283566:1
position: 283566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284042:1
position: 284042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283566-284042:1:exon

RFER_RS01405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01405
old locus tag: Rfer_0279
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013091135.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MarR family transcriptional regulator
translation: MTQATSQAPAFTLYDEPGHLIRRAQQIAVSKFHEVHGRQVTPIQYAILRTLFESPGVDQVTLAQLIALDTSSTADIATRLEAKGWILREVLPRRQRSLSLTPAGEAVLQGMRSGIEQMYLGMMDSLDAAEQREFMRLLRKFVHLNDQQNQADEPKTKG
SIO_010081: RFER_RS01405
subclass of: SO_0000673
so part of: RFER_RS01405
location: 283566..284042
location: region:283566-284042:1
so has part: feature:283566-284042:1:exon

WP_011462609.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:283566-284042:1:exon

RFER_RS01410
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01410
old locus tag: Rfer_0280
so part of: sequence
location: 284179..285234
location: region:284179-285234:1
so has part: feature:284179-285234:1:exon
subclass of: SO_0000010

position:284179:1
position: 284179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285234:1
position: 285234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284179-285234:1:exon

RFER_RS01410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01410
old locus tag: Rfer_0280
EC number: 1.14.13.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019572292.1
GO function: GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aromatic ring-hydroxylating dioxygenase subunit alpha
translation: MFPKNTWYVAATPNEIDEKPLGRTICGERIAFYRGEENKVAAVEDFCPHRGAPLSLGYVSEGKLVCGYHGLEMGCQGKTIAMPGQRVRGFPAIKAYPVVERYGFIWVWPGDAAQADEAKIPHMAWYDNPEWAYGGGLYHINCDYRLMIDNLMDLTHETYVHASSIGQKEIDETPCKTTVEGDTVVTSRFMSGIQPPPFWQMALRANHLADDVPVDRWQICRFTPPSHVMIEVGVAHQGHGGYDAPNDKKAYSVVVDFITPETETSIHYFWGMARKFNPADKALTASIREGQGKIFGEDLEMLERQQQNLLAHPERALLMLNIDAGGVQSRRILERVIAQEKQGAGPVGTSV
SIO_010081: RFER_RS01410
subclass of: SO_0000673
so part of: RFER_RS01410
location: 284179..285234
location: region:284179-285234:1
so has part: feature:284179-285234:1:exon

WP_011462610.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:284179-285234:1:exon

RFER_RS01415
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01415
old locus tag: Rfer_0281
so part of: sequence
location: 285245..286216
location: region:285245-286216:1
so has part: feature:285245-286216:1:exon
subclass of: SO_0000010

position:285245:1
position: 285245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286216:1
position: 286216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285245-286216:1:exon

RFER_RS01415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01415
old locus tag: Rfer_0281
EC number: 1.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011802103.1
GO function: GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PDR/VanB family oxidoreductase
translation: MSSTSALSVRVARKATVATDICTLELVAAQDGTALPGFSAGSHVDVHLPGGLTRPYSLCNDPKETHRYLIGVLRDPASRGGSQAVHEQVQEGQVLQISAPKNHFPLAHDAKHSLLLGGGIGITPILCMAERLANTGADFELHYCTRSIERTAFRERIAASSFADQVQFHFDDGDAAQKLNLATLLCAPKAGCHLYVCGPKGFMDAVLKTARDIGWPEGRLHYEFFAAEVLKSEADASFEVKLASSGRIITVAKDQTVTKALSDAGVEVQTACEQGVCGTCLTRVLEGVPDHKDQYLTPEEQAANDQFLPCCSRAKTARLVLDL
SIO_010081: RFER_RS01415
subclass of: SO_0000673
so part of: RFER_RS01415
location: 285245..286216
location: region:285245-286216:1
so has part: feature:285245-286216:1:exon

WP_011462611.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:285245-286216:1:exon

RFER_RS23840
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS23840
old locus tag: Rfer_0282
so part of: sequence
location: complement(286528..287214)
location: region:286528-287214:-1
so has part: feature:286528-287214:-1:exon
subclass of: SO_0000010

position:286528:-1
position: 286528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287214:-1
position: 287214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286528-287214:-1:exon

RFER_RS23840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS23840
old locus tag: Rfer_0282
inference: COORDINATES: protein motif:HMM:NF015639.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YkgJ family cysteine cluster protein
translation: MNTSVPVNKLAEVEAGDFGVWLTQVLASFRGSAGTDVPCGSCRGCCTSSYFIHVRPSDLKTIGAVPKSLLTAAPGLPQGYKLIGFTSNGFCALLKNGDCSIYSSRLQTCRDYDCRVFTAAGINAGGADKAAINQRVQEWQFSYATGQDQQIHNAIKKAASFIVKNRAAFPGGRAPVAPSDIAVLAIKVHGVFLLPEMGSQTPSEIAEAIIRASREFEASRSTDGTEKQ
SIO_010081: RFER_RS23840
subclass of: SO_0000673
so part of: RFER_RS23840
location: complement(286528..287214)
location: region:286528-287214:-1
so has part: feature:286528-287214:-1:exon

WP_011462612.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:286528-287214:-1:exon

RFER_RS01425
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01425
old locus tag: Rfer_0283
so part of: sequence
location: 287356..287922
location: region:287356-287922:1
so has part: feature:287356-287922:1:exon
subclass of: SO_0000010

position:287356:1
position: 287356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287922:1
position: 287922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287356-287922:1:exon

RFER_RS01425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01425
old locus tag: Rfer_0283
inference: COORDINATES: protein motif:HMM:NF024212.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MarR family transcriptional regulator
translation: MAATVGTGPGPLLGECWREFSWRFAGSDLLLAFLKSMIRILTMKGQALELISEIHLDWKRHVARALAPHGITPKQIFLLRKLKESATLTPSEVAVLIHGDRPSTTSMLDTLERSGWICRQRDPSNGKRVIITMTDAGMEKLASVPERLWRSGKVPSDPESCLERDEREELTRLLQKMHRCMNANPQER
SIO_010081: RFER_RS01425
subclass of: SO_0000673
so part of: RFER_RS01425
location: 287356..287922
location: region:287356-287922:1
so has part: feature:287356-287922:1:exon

WP_166485628.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:287356-287922:1:exon

RFER_RS01430
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01430
old locus tag: Rfer_0284
so part of: sequence
location: 287927..288817
location: region:287927-288817:1
so has part: feature:287927-288817:1:exon
subclass of: SO_0000010

position:287927:1
position: 287927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288817:1
position: 288817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287927-288817:1:exon

RFER_RS01430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01430
old locus tag: Rfer_0284
inference: COORDINATES: protein motif:HMM:NF013088.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EamA family transporter
translation: MLAWLAYLTASVVWGSTFLAIAFAIETFTPFGLSAVRFIPAGILALLIGQIRKERFPSWREIPHIALVGITLLGVCMGLIGWAEGRVSSGVTAALGATVPLFLALMDPRGLDPKAWCGLGMGFLGVLVLLWPSGQGPALSGAAALVLSASLWAYGTLYGKRHADESGHFSQIGVEMLVAGVLSLLAASLTGGISHGTWNPRSLLAVGYLITFGSILAYSAYIYLSKVWPCAKAGTYAYWNPIVGVLLGCWFRGETFHARMLPGLACILLGVALVQIPWPKALRFGSANQGAKQISR
SIO_010081: RFER_RS01430
subclass of: SO_0000673
so part of: RFER_RS01430
location: 287927..288817
location: region:287927-288817:1
so has part: feature:287927-288817:1:exon

WP_011462614.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:287927-288817:1:exon

RFER_RS01435
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01435
old locus tag: Rfer_0285
so part of: sequence
location: 288968..289435
location: region:288968-289435:1
so has part: feature:288968-289435:1:exon
subclass of: SO_0000010

position:288968:1
position: 288968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289435:1
position: 289435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288968-289435:1:exon

RFER_RS01435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01435
old locus tag: Rfer_0285
inference: COORDINATES: protein motif:HMM:NF018184.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GyrI-like domain-containing protein
translation: MEVVEQGGMTVAGVLVQAPWQRLWDEVPKAWQQVFQRAPELQALQQGPFMDVSLGLVDSAYLQLVGVRLREGAAVPRGFTAVHIPAQKLLRHRHVGPAAGIADSFGAMYAWARRHGVALGDFKLDFGYLPSGDETEHELLAGLLPEVAWRSAHAG
SIO_010081: RFER_RS01435
subclass of: SO_0000673
so part of: RFER_RS01435
location: 288968..289435
location: region:288968-289435:1
so has part: feature:288968-289435:1:exon

WP_166485629.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:288968-289435:1:exon

RFER_RS23845
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS23845
pseudo: true
so part of: sequence
location: <289598..289825
location: region:289598-289825:1
so has part: feature:289598-289825:1:exon
subclass of: SO_0000010

position:289598:1
position: 289598
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:289825:1
position: 289825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289598-289825:1:exon

RFER_RS23845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS23845
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007848532.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: RFER_RS23845
subclass of: SO_0000673
so part of: RFER_RS23845
location: <289598..289825
location: region:289598-289825:1
so has part: feature:289598-289825:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:289598-289825:1:exon

RFER_RS01440
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01440
old locus tag: Rfer_0287
so part of: sequence
location: 289750..290361
location: region:289750-290361:1
so has part: feature:289750-290361:1:exon
subclass of: SO_0000010

position:289750:1
position: 289750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:290361:1
position: 290361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289750-290361:1:exon

RFER_RS01440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01440
old locus tag: Rfer_0287
inference: COORDINATES: protein motif:HMM:NF013237.2
GO function: GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO process: GO:0019346 - transsulfuration [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PLP-dependent transferase
translation: MDNTWATALGFRALDAGVDYCVQALTKYVGGHSDLLMGAVSTRDVAAYHALRDTAELLGYYVAPDECFLALRGLPTLALRLERQYASALRIATFLQSHAAISQVNYPPRPGDTYHHLWQRDFKLGNGLLSFTLRQNDMQAIENFVAALQLFTLGNSWGGVHSLVAVAPQRATSSGWLLRLHVGVEQADDLLADLAQALTVLEG
SIO_010081: RFER_RS01440
subclass of: SO_0000673
so part of: RFER_RS01440
location: 289750..290361
location: region:289750-290361:1
so has part: feature:289750-290361:1:exon

WP_049765596.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:289750-290361:1:exon

RFER_RS01445
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01445
old locus tag: Rfer_0288
so part of: sequence
location: 290698..291870
location: region:290698-291870:1
so has part: feature:290698-291870:1:exon
subclass of: SO_0000010

position:290698:1
position: 290698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291870:1
position: 291870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:290698-291870:1:exon

RFER_RS01445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01445
old locus tag: Rfer_0288
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011802109.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MNKRQFIHAIALAVSLLAASNSIAQGNTFKIGLILPMTGQQASTGRQIEAAAKLYMAQNGDTVAGKKVGLIVKDDTSIPDVTKRLAQDLVVNDKVNVLAGFGITPSALATAPIATQSKTPLVVMAAATSSITQASPYVVRTSFTLAQAAVAMGDWAPKNGIKKVVTLVSDYGPGIDAEKYFKERFLFNGGQVPESLRVPLRNPDFAPFLQKVRDLKPDALFVFVPSGAGAAVMKQFLERGMDKAGIKLIGTGDVTDDDQLNGMGDGALGVVTSHHYSTAHPSAVNKKFVEAFGKANPGLRPNFMAVGGYDGMRVIYEALKATKGQGGGDALLAAMKGQIFESPRGPMFIDAQTRDVVHNIYLRKVEKKDGQLYNVEFDVIKDVKDPGKAK
SIO_010081: RFER_RS01445
subclass of: SO_0000673
so part of: RFER_RS01445
location: 290698..291870
location: region:290698-291870:1
so has part: feature:290698-291870:1:exon

WP_011462616.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:290698-291870:1:exon

RFER_RS01450
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01450
old locus tag: Rfer_0289
so part of: sequence
location: 291939..292811
location: region:291939-292811:1
so has part: feature:291939-292811:1:exon
subclass of: SO_0000010

position:291939:1
position: 291939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292811:1
position: 292811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291939-292811:1:exon

RFER_RS01450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01450
old locus tag: Rfer_0289
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007849923.1
GO component: GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0015658 - branched-chain amino acid transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: branched-chain amino acid ABC transporter permease
translation: MLTILFDGIAYGMLLFILAVGLAVTMGLMNFINLAHGAFAMVGGYITVLLMQKFGVPFLLCLPLAFVGSALLGALLERTLYRPLYHKPHLDQVLFSIGLTFMAVASADYFIGSGQQIIQLPEWLKGRTEFGDGAWMLGMGHYRLFIIAVCAALTVALQYVLTKTRFGSRLRASVDDQRVAAGMGINVNLVFLTTFAVGSGLAGLGGALGAEVLGLDPSFPLKFMIYFLIVVAVGGTSSITGPLLAALLLGIADVAGKYYIPKLGGFIVYSLMIAILIWRPQGLFVRKGGK
SIO_010081: RFER_RS01450
subclass of: SO_0000673
so part of: RFER_RS01450
location: 291939..292811
location: region:291939-292811:1
so has part: feature:291939-292811:1:exon

WP_011462617.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:291939-292811:1:exon

RFER_RS01455
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01455
old locus tag: Rfer_0290
so part of: sequence
location: 292811..293788
location: region:292811-293788:1
so has part: feature:292811-293788:1:exon
subclass of: SO_0000010

position:293788:1
position: 293788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292811-293788:1:exon

RFER_RS01455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01455
old locus tag: Rfer_0290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015016186.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO process: GO:0015803 - branched-chain amino acid transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: branched-chain amino acid ABC transporter permease
translation: MSNTQDLLRQTGRWKRWEVPLWLLALASPLLLSGHALIINEIAIVALFALSLDLILGFTGIVSLGHAAFFGMGAYSAALFAKLVMPDPLVGLAVGIACAALLGALCSATILRGTDLTRLMVTLGVALILGELANKLDWLTGGADGLQGVMMGPLLGQFEFDLTGRTAAWYSLTVLLVVFVITRRFVNSPFGATLKAIRDNRLRAMAIGIAVNSRMALVYTVAAALAGAAGALLAQTTGFASLDLFEFHRSADVMLILVIGGVGWLYGGITGAIVFKLMQDAISSITPQYWTFWIGLFLVVLVLVGRERLIRPWTWFGKGKTGGAA
SIO_010081: RFER_RS01455
subclass of: SO_0000673
so part of: RFER_RS01455
location: 292811..293788
location: region:292811-293788:1
so has part: feature:292811-293788:1:exon

WP_011462618.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:292811-293788:1:exon

RFER_RS01460
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01460
old locus tag: Rfer_0291
so part of: sequence
location: 293785..294591
location: region:293785-294591:1
so has part: feature:293785-294591:1:exon
subclass of: SO_0000010

position:293785:1
position: 293785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294591:1
position: 294591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293785-294591:1:exon

RFER_RS01460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01460
old locus tag: Rfer_0291
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018903039.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MSDTVLSAQGLVMKFGGITATNNVTLDLKQGARHALIGPNGAGKTTLINLLTGVLQPTSGKIVLEGQDITTLAPYQRVRRGMVRTFQINQLFDTLTPLETLAMVVSQQQGLGNKWWQALGANQRVTERCEQLLEQFHLTAVMTQPTRVLAYGKRRLLEIAIALACEPRVLLLDEPVAGVPAGEREELLQTVAALPADVSILLIEHDMDLVFSFAKRMTVLVNGTVLTEGDPDQIAHDPQVKAVYLGHGDEINDAMGGMMASAGGTHHG
SIO_010081: RFER_RS01460
subclass of: SO_0000673
so part of: RFER_RS01460
location: 293785..294591
location: region:293785-294591:1
so has part: feature:293785-294591:1:exon

WP_011462619.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:293785-294591:1:exon

RFER_RS01465
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01465
old locus tag: Rfer_0292
so part of: sequence
location: 294584..295321
location: region:294584-295321:1
so has part: feature:294584-295321:1:exon
subclass of: SO_0000010

position:294584:1
position: 294584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295321:1
position: 295321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294584-295321:1:exon

RFER_RS01465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01465
old locus tag: Rfer_0292
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011484284.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MGELLKVENLSAGYGEAVVLHGVSLSIAEGQTLALLGRNGTGKTTLINTLAGATRQHGGSISLGTGATSVTLHKLPSHERAAAGIGWVPQERNIFKSLTVHENLTAVARPARAGRASRPWTPERVYELFPRLAERKSNLGTQLSGGEQQMLALGRALVLNPTLLLLDEPCEGLAPIIVQELLRAIRRITRDEGLSAIIVEQHPQAILAISDTAAVLDRGTVVHTGTARSLQEQPALLDKLLGVAR
SIO_010081: RFER_RS01465
subclass of: SO_0000673
so part of: RFER_RS01465
location: 294584..295321
location: region:294584-295321:1
so has part: feature:294584-295321:1:exon

WP_011462620.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:294584-295321:1:exon

RFER_RS01470
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01470
old locus tag: Rfer_0293
so part of: sequence
location: 295428..296012
location: region:295428-296012:1
so has part: feature:295428-296012:1:exon
subclass of: SO_0000010

position:295428:1
position: 295428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296012:1
position: 296012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295428-296012:1:exon

RFER_RS01470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01470
old locus tag: Rfer_0293
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011462557.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hemerythrin domain-containing protein
translation: MEPSSIHIIRDEHATLAAMLRSLGMMVARGPGAHPQNFFDVLRAMLFYIDEFPERLHHPKETELLFPKVAARSPETAALIAQLDREHELGESNVRELQHLLLAWELLGESRREPFDVAAKRYLSFYLEHMRLEETVILPAAMKVLSAADWKDIDAAFETNCDPLTGQYPRDPLYDQLFTRIVNHAPAPIGLGED
SIO_010081: RFER_RS01470
subclass of: SO_0000673
so part of: RFER_RS01470
location: 295428..296012
location: region:295428-296012:1
so has part: feature:295428-296012:1:exon

WP_041790007.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:295428-296012:1:exon

RFER_RS01475
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01475
old locus tag: Rfer_0294
so part of: sequence
location: complement(296062..296913)
location: region:296062-296913:-1
so has part: feature:296062-296913:-1:exon
subclass of: SO_0000010

position:296062:-1
position: 296062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296913:-1
position: 296913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296062-296913:-1:exon

RFER_RS01475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01475
old locus tag: Rfer_0294
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006296240.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class III extradiol dioxygenase family protein
translation: MAKIIGGLGTSHIPAIGGAIHKGLQQDPYWKPFFDGFPPIHEWLKAQKPDVMVIFYNDHGLNFFLDKMPTFAVGAAPQYVNSDEGWGIPSLEALKGEVDLSWQIINHLVDKEFDITTCQELLVDHACSLPLKLFFPEGNYPVTVVPVCINTVQFPLPKAHRVYTLGRAVGEAVAAWDSSKKVAFIASGGLSHQLEGTRAGFINKDFDLKFMESLLTNPEWATQFSIHELVEKTGTQGIELLTWLAMRAALTVGEGAGVRKVHSNYHIPISNTATGLLALEKVS
SIO_010081: RFER_RS01475
subclass of: SO_0000673
so part of: RFER_RS01475
location: complement(296062..296913)
location: region:296062-296913:-1
so has part: feature:296062-296913:-1:exon

WP_011462622.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:296062-296913:-1:exon

RFER_RS01480
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01480
old locus tag: Rfer_0295
so part of: sequence
location: complement(296929..297282)
location: region:296929-297282:-1
so has part: feature:296929-297282:-1:exon
subclass of: SO_0000010

position:296929:-1
position: 296929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297282:-1
position: 297282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296929-297282:-1:exon

RFER_RS01480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01480
old locus tag: Rfer_0295
EC number: 1.13.11.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015016195.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protocatechuate 4,5-dioxygenase subunit alpha
translation: MVSRTPLPQIPGTNPFDGELAKKGYALNKMCFSFNSAENRAEFKNDEEAYMRKYGLTKPQAAAIRAKNVLQLLDAGGNAYYLAKFAGIFGLDMQDIGAQQTGMTKEEFKAKLVAAGK
SIO_010081: RFER_RS01480
subclass of: SO_0000673
so part of: RFER_RS01480
location: complement(296929..297282)
location: region:296929-297282:-1
so has part: feature:296929-297282:-1:exon

WP_011462623.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:296929-297282:-1:exon

RFER_RS01485
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01485
old locus tag: Rfer_0296
so part of: sequence
location: 297415..298338
location: region:297415-298338:1
so has part: feature:297415-298338:1:exon
subclass of: SO_0000010

position:297415:1
position: 297415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298338:1
position: 298338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297415-298338:1:exon

RFER_RS01485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01485
old locus tag: Rfer_0296
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009550665.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MSKFNYTDLDGHLLQLLVAVVEVGSITGAAQRLGVTQSAVSHLLDKLRAITGDALFVKSGRGIVATAHAEQLAGKARELLMAMEGFAMSGAFDPARWRCTFTIAANDFQRDVLLPPLMAQLRQEAPGVTLRVIPSNIPSLEMLRQEHCQLVISPRPPVGGDVMQKRLFEDSYRVYYDPNQRDAPQTLADYLAAEHITVVYEPKRALDLDQWLAGRGVQRQFRVMVPGMAALPAFMRGSQLLATAPGLLQQHLFKDLASAPVPLDCPKMPMYMIWHLRYQNDPAHQWLRAGLSQISLKVASTELAAPS
SIO_010081: RFER_RS01485
subclass of: SO_0000673
so part of: RFER_RS01485
location: 297415..298338
location: region:297415-298338:1
so has part: feature:297415-298338:1:exon

WP_011462624.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:297415-298338:1:exon

RFER_RS01490
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01490
old locus tag: Rfer_0297
so part of: sequence
location: complement(298346..299269)
location: region:298346-299269:-1
so has part: feature:298346-299269:-1:exon
subclass of: SO_0000010

position:298346:-1
position: 298346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299269:-1
position: 299269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298346-299269:-1:exon

RFER_RS01490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01490
old locus tag: Rfer_0297
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019575092.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MTISNKTRVPKRKAQAIPTFALYGESVTSAQDMLHIEDVQSRSQLYQWEIEPHVHHGLYQVLWLQQGTADVLLDERREAVRGPTAIVVPPGVVHGFRFAPATDGLVLTLSAKFLEAGEFQAVGEAFRALFAAPGLLPFEPGQVTAVRLNALFRELLAEFLLPGSDGSPVPVWLARSLVWRLAQASARGQQVQGKRAYGHQALFTRFLLLVEQHFLEHWPLERYASRLGLSTPRLNRLVREQRGVSALELVHERLTREACRRLIYIAAPAARLAAELGFEDPAYFSRFFKRRMGVSPQRYRSEHGGQD
SIO_010081: RFER_RS01490
subclass of: SO_0000673
so part of: RFER_RS01490
location: complement(298346..299269)
location: region:298346-299269:-1
so has part: feature:298346-299269:-1:exon

WP_011462625.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:298346-299269:-1:exon

RFER_RS01495
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01495
old locus tag: Rfer_0298
so part of: sequence
location: 299379..300557
location: region:299379-300557:1
so has part: feature:299379-300557:1:exon
subclass of: SO_0000010

position:299379:1
position: 299379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300557:1
position: 300557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299379-300557:1:exon

RFER_RS01495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01495
old locus tag: Rfer_0298
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009550667.1
GO function: GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome P450
translation: MFSFDPYAPAVDANPFPFYKTLRDEHPCFWSPEADMWILSRYADIVSAGQDAQTYSSASGNLMTELPGRAGATLGTTDAPRHDRLRGLIQHAFMKRNLESLSEPIRDIAREVAESLRGKKQFDFISEFSSKFTVRVLFAALGLPTGAEVTVPESTVRDKAVMMVQSDPVTRTKGPEHIAAYNWMQDYAAGVIAERRASPRNDLISHFSMAEIDGDKLDEREVLLTTTTLIMAGIESLGGFMAMFALNMADFADARRQCVANPALLADAVEESLRFNTSAQRFRRRLMKDVTLHGQTMKAGDFVCLAYGSGNRDERQYPNPDAYDITRKPRGHLGFGGGVHACLGTAIARLAVKIAFDEFHKVVPEYHRVQEQLPWMPSSTFRSPLVLELAVV
SIO_010081: RFER_RS01495
subclass of: SO_0000673
so part of: RFER_RS01495
location: 299379..300557
location: region:299379-300557:1
so has part: feature:299379-300557:1:exon

WP_011462626.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:299379-300557:1:exon

RFER_RS01500
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01500
old locus tag: Rfer_0299
so part of: sequence
location: 300562..300885
location: region:300562-300885:1
so has part: feature:300562-300885:1:exon
subclass of: SO_0000010

position:300562:1
position: 300562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300885:1
position: 300885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300562-300885:1:exon

RFER_RS01500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01500
old locus tag: Rfer_0299
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009550668.1
GO function: GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2Fe-2S iron-sulfur cluster-binding protein
translation: MANITYIEASGQATTLKLADGWSLMQGATANGVDGILGECGGSCACATCHCYVDEARLADLPPASDNELAMLDNVAAERRPGSRLACQIKASAALDGLIIHLPDMQE
SIO_010081: RFER_RS01500
subclass of: SO_0000673
so part of: RFER_RS01500
location: 300562..300885
location: region:300562-300885:1
so has part: feature:300562-300885:1:exon

WP_011462627.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:300562-300885:1:exon

RFER_RS01505
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01505
old locus tag: Rfer_0300
so part of: sequence
location: 300889..302124
location: region:300889-302124:1
so has part: feature:300889-302124:1:exon
subclass of: SO_0000010

position:300889:1
position: 300889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302124:1
position: 302124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300889-302124:1:exon

RFER_RS01505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01505
old locus tag: Rfer_0300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019575089.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-dependent oxidoreductase
translation: MTAHIVIIGAGQAGVQTAEALRAGGFAGAITLLGDEPHGPYHRPPLSKAWLAGDIGAEQLVMRAPEALARKNIALRTHTQVNAIDRAARQVKLADGSALSYSGLVLATGSTPRRLPLPGGDAKGVLALRSRMDASAIAERMAMCIEQQLPVVVIGGGFIGLEVAATARKKGLRVTVLEAAPRLLGRVLAPLLSDWYAQLHRSHGVNLVLGAQITALEADRQGTVSGVRMADGTLHPAALVVVGIGVSANEQLARDAGLACERGIVVDACGRTSDPVIVAAGDCAARRLPDGSLLRLESVQNAIEQGKSVAAALLGQERPFTATPWFWSDQYDKKLQMAGLSGGADQWAVRGDMDSGSFSVYHLRAGQLLAVDSVNASRDHLQARKLLDAGVSPTPAQVGDAAFDLGTLLLK
SIO_010081: RFER_RS01505
subclass of: SO_0000673
so part of: RFER_RS01505
location: 300889..302124
location: region:300889-302124:1
so has part: feature:300889-302124:1:exon

WP_011462628.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:300889-302124:1:exon

RFER_RS24790
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS24790
so part of: sequence
location: complement(302128..302262)
location: region:302128-302262:-1
so has part: feature:302128-302262:-1:exon
subclass of: SO_0000010

position:302128:-1
position: 302128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302262:-1
position: 302262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302128-302262:-1:exon

RFER_RS24790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS24790
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDSRYGAAIIHLIGAGAVGHAALGAVTGDLGRPWGLNPASVTHG
SIO_010081: RFER_RS24790
subclass of: SO_0000673
so part of: RFER_RS24790
location: complement(302128..302262)
location: region:302128-302262:-1
so has part: feature:302128-302262:-1:exon

WP_279587689.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:302128-302262:-1:exon

RFER_RS24415
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS24415
pseudo: true
so part of: sequence
location: complement(<302554..>302658)
location: region:302554-302658:-1
so has part: feature:302554-302658:-1:exon
subclass of: SO_0000010

position:302554:-1
position: 302554
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:302658:-1
position: 302658
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302554-302658:-1:exon

RFER_RS24415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS24415
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007830136.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DNA-binding response regulator
SIO_010081: RFER_RS24415
subclass of: SO_0000673
so part of: RFER_RS24415
location: complement(<302554..>302658)
location: region:302554-302658:-1
so has part: feature:302554-302658:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:302554-302658:-1:exon

RFER_RS01510
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01510
old locus tag: Rfer_0302
so part of: sequence
location: complement(302713..303717)
location: region:302713-303717:-1
so has part: feature:302713-303717:-1:exon
subclass of: SO_0000010

position:302713:-1
position: 302713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:303717:-1
position: 303717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302713-303717:-1:exon

RFER_RS01510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01510
old locus tag: Rfer_0302
EC number: 1.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011801414.1
GO function: GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aldo/keto reductase
translation: MHLRKLGPFQVSAIGLGCMNLSHAYGAPVSAEQGERVLLSALDAGVTLFDTAALYGFGANEILVGRVLKPHRQKFTLASKCGMQGVDVNGDGKLLRVIDGRPQTIRKTCEDSLRRLQTDVIDLYYLHRWDKKVPVEDSVGALSDLVRKGHIRSIGLSEVSAATLRRAHAVHPIAAVQTEYSLWTRNPEIAVLDACKELGVAFVAFSPVARGFLCGQLQDVNTLDAKDIRRSMPRFAPDTYAANLKLLPAYQQVAQEVGCSPAQLALAWLLHRGEHIIPIPGTTSVAHLAEDLAAVDLRLSPAVMARLDALINQKNVVGSRYNAQGNSEVDTEDF
SIO_010081: RFER_RS01510
subclass of: SO_0000673
so part of: RFER_RS01510
location: complement(302713..303717)
location: region:302713-303717:-1
so has part: feature:302713-303717:-1:exon

WP_011462630.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:302713-303717:-1:exon

RFER_RS01515
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01515
old locus tag: Rfer_0303
so part of: sequence
location: 303928..304545
location: region:303928-304545:1
so has part: feature:303928-304545:1:exon
subclass of: SO_0000010

position:303928:1
position: 303928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:304545:1
position: 304545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:303928-304545:1:exon

RFER_RS01515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01515
old locus tag: Rfer_0303
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016446385.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TetR/AcrR family transcriptional regulator
translation: MMLVMRNSPSNIRTAAKEASHERIVDAAARAIRRSGYDGTGVADIMKEAGLTHGAFYAHFASREAMLAEAADRAGAEANAAAASVIAAVPPERALQALMQVYLSKEHLESIETGCPISALGSEMPRQSPEVRRAATRRIKEMVDLVARQFPDWGQPGAHERALVTVATMVGTLMLARAVNDSALSDALRSATLKSLSLAKPASTD
SIO_010081: RFER_RS01515
subclass of: SO_0000673
so part of: RFER_RS01515
location: 303928..304545
location: region:303928-304545:1
so has part: feature:303928-304545:1:exon

WP_041790009.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:303928-304545:1:exon

RFER_RS01520
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01520
old locus tag: Rfer_0304
so part of: sequence
location: 304645..305646
location: region:304645-305646:1
so has part: feature:304645-305646:1:exon
subclass of: SO_0000010

position:304645:1
position: 304645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305646:1
position: 305646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304645-305646:1:exon

RFER_RS01520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01520
old locus tag: Rfer_0304
EC number: 1.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016446384.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADP-dependent oxidoreductase
translation: MKAFTIDRYGKKSALRLADVPTPELRDDEILVQVHAAGVNLVDAKVRNGEFKLIVPYRLPLILGHDVAGEVVKVGRRVRQFKPGDAVYARPDDLRIGTFAEFVPVKEASLALKPKGLTMEEAASIPLVALTAWQALVEKAKLKKGQKVFIQAGSGGVGTFAIQLAKHLGATVATTTSSGNVALVKSLGADVVIDYKTQDFEDVLRDYDVVLNSQDNKTLVKSLSVLKPGGKLISISGPPDPAFGKEIKAPGFVRLVMRLLSAGVRRKAKRLGVDFSFLFMKANGSQLREITRLLDAGVIRPVVDRVFPFAETNAALAYVEAGRAKGKVVVKVK
SIO_010081: RFER_RS01520
subclass of: SO_0000673
so part of: RFER_RS01520
location: 304645..305646
location: region:304645-305646:1
so has part: feature:304645-305646:1:exon

WP_011462632.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:304645-305646:1:exon

RFER_RS01525
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01525
old locus tag: Rfer_0305
so part of: sequence
location: 305681..306385
location: region:305681-306385:1
so has part: feature:305681-306385:1:exon
subclass of: SO_0000010

position:305681:1
position: 305681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306385:1
position: 306385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305681-306385:1:exon

RFER_RS01525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01525
old locus tag: Rfer_0305
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007830028.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MKIENAVVLVTGANRGIGLAFARELLARGARKVYATARDPATVTLAGVQALQLDVTNAWQVAAAAHQAADVTLVINNAGIAQPGGFLAQDSEAVARRIFETNFFGMLNMSKAFAPVLKANGGGALLNVLSVASWVNGGELAAYSASKSAAWSLTNALRHELAGQKTQVLGLHMAYVDTDLTRGFEVPKSSAEEIVQRALDGLETGAEEVLADALTQQVRQGLTAPRPGYLPQAN
SIO_010081: RFER_RS01525
subclass of: SO_0000673
so part of: RFER_RS01525
location: 305681..306385
location: region:305681-306385:1
so has part: feature:305681-306385:1:exon

WP_011462633.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:305681-306385:1:exon

RFER_RS01530
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01530
old locus tag: Rfer_0306
so part of: sequence
location: 306423..307499
location: region:306423-307499:1
so has part: feature:306423-307499:1:exon
subclass of: SO_0000010

position:306423:1
position: 306423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307499:1
position: 307499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:306423-307499:1:exon

RFER_RS01530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01530
old locus tag: Rfer_0306
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013209950.1
GO function: GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alkene reductase
translation: MLFTPLKASSLQLSNRVVMSPLTRSRASQDNIPTALMAEYYGQRATAGLIITEGTSPSPNGLGYPRMPGLFNAVQVAGWKQVTDAVHAKGGKIVIQLMHTGRVTHVANLPAGAEVVGPSADPCPGEMITDAQGMQPHSTPWAMTQADITTAVDEYVQSAKLAIEAGFDGVELHAANGYLIEQFLNANVNKRTDGYGSSIEGRNRFALEVARATAAAIGADKVGIRLSPHGVLGGTGTFPEVDAQYLALTDALSSLELAYIHVLDHSALGTPPVPEATKKALRAAFKGTFILAGGFDRASAEAALAEGRADLIAFGRPFIANPDWVARMRNGAAVSALDMSTFYTPGPKGYTDYPSLGA
SIO_010081: RFER_RS01530
subclass of: SO_0000673
so part of: RFER_RS01530
location: 306423..307499
location: region:306423-307499:1
so has part: feature:306423-307499:1:exon

WP_011462634.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:306423-307499:1:exon

RFER_RS01535
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01535
old locus tag: Rfer_0307
so part of: sequence
location: 307517..308485
location: region:307517-308485:1
so has part: feature:307517-308485:1:exon
subclass of: SO_0000010

position:307517:1
position: 307517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308485:1
position: 308485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307517-308485:1:exon

RFER_RS01535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01535
old locus tag: Rfer_0307
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003268990.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta hydrolase
translation: MQHFLKAALVGLAMAATLLPASVSAADAVSTGMPQALQTSGQTLGNSWKSVATQTITAGDISFAYRELGKQNGGTPVVLLAHLAAVLDNWDPRIMDGIAAKHHVIAFDNRGIGASSGSPSNAMEQMADDAVTFIKAMGFQQVDLLGFSMGGMVAQEIVLKEPQLVRKMILAGTGPAGGEGISSVSGVTFYDMLRGFFTGQDAKQYLFFTRTPNGIEAGKAFLERLKERSENRDKDISVSAFLAQLQALRAWGQKEPADLSVVKQPVLVVNGDADRMVPTPNTHDLARRLPNSTLIIYPDAGHGGIFQFHAEFVPSALEFLAR
SIO_010081: RFER_RS01535
subclass of: SO_0000673
so part of: RFER_RS01535
location: 307517..308485
location: region:307517-308485:1
so has part: feature:307517-308485:1:exon

WP_011462635.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:307517-308485:1:exon

RFER_RS01540
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01540
old locus tag: Rfer_0308
so part of: sequence
location: 308539..309339
location: region:308539-309339:1
so has part: feature:308539-309339:1:exon
subclass of: SO_0000010

position:308539:1
position: 308539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309339:1
position: 309339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308539-309339:1:exon

RFER_RS01540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01540
old locus tag: Rfer_0308
EC number: 1.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015865605.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MTNPSSKKVALITGASSGIGAVYADRLAARGYDLILVARRADRLEALCTQISKAHGIKAEPVVADLTKDQDVARIETILATHGDVHVLVNNAGVARLAPAAQTSANDALTQIALNITALTRLTQAVMPAFVARNQGLIINIASALAVHSLPISAIYSGTKAFVLQYSRGLQQELAETGVKVQLVLPAATATELWDLSGVPLAALNKETLMTTEHMVDAALAGLDQGEMITWPSVADASLWDKYEAARTELFAGTQAGTPAPRYKIG
SIO_010081: RFER_RS01540
subclass of: SO_0000673
so part of: RFER_RS01540
location: 308539..309339
location: region:308539-309339:1
so has part: feature:308539-309339:1:exon

WP_011462636.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:308539-309339:1:exon

RFER_RS01545
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01545
old locus tag: Rfer_0309
so part of: sequence
location: 309384..310370
location: region:309384-310370:1
so has part: feature:309384-310370:1:exon
subclass of: SO_0000010

position:309384:1
position: 309384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310370:1
position: 310370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309384-310370:1:exon

RFER_RS01545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01545
old locus tag: Rfer_0309
EC number: 1.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018907357.1
GO function: GO:0030554 - adenyl nucleotide binding [Evidence IEA]; GO:0004024 - alcohol dehydrogenase activity, zinc-dependent [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MDR family oxidoreductase
translation: MTFQALLASKTGDKITTSVVSLSDADLMPGDVVVDIDYSTVNYKDAIAITGRAEVIRQFPLIPGIDFAGTVKTSSYPGIAAGDRVVANGWGLSQTHHGGYAQQARVKGEWLIKLPAALSTKDAMAIGTAGYTAMLSVMALEHGGLTPQHGDILVTGANGGVGSVAIALLSGLGYRVVASTGRLEESEYLRSLGAADIIDRRTLSEPGAPIAGEKWAGAVDSVGSHTLANVLAQTKYRGVVTACGLAQGMDLPASVLPFILRNVTLAGIDSVNAPQQVRIEAWSRLARDLDLAKLARATHVVGLAEVPTVAAQMLEGRVQGRVVVDVNA
SIO_010081: RFER_RS01545
subclass of: SO_0000673
so part of: RFER_RS01545
location: 309384..310370
location: region:309384-310370:1
so has part: feature:309384-310370:1:exon

WP_011462637.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:309384-310370:1:exon

RFER_RS01550
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01550
old locus tag: Rfer_0310
so part of: sequence
location: 310387..311211
location: region:310387-311211:1
so has part: feature:310387-311211:1:exon
subclass of: SO_0000010

position:310387:1
position: 310387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311211:1
position: 311211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310387-311211:1:exon

RFER_RS01550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01550
old locus tag: Rfer_0310
EC number: 1.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015866230.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MSTNTTVKMAKRALVTGASSGIGAAIARELAALGIDLVLTARRRAALEAVAASCKGVKVEIVTADLGKPDAAHALWAAATASGPIDILINNAGFGYFRRFDEVDWARDAELVQLNMTSLVALARCFVDAHRAGTTPAHMLNIASTGAYQSVPNMALYAASKAFVRNFSEALHDEYRGTPLSVTCICPGGTETAFHAASGGGDYSWIANASTKSAEFVAHAAVRAMLAGKRTVVPGLFNQLSTFGVRFLSRRVASKVATQVLGKPRLALPVRSAT
SIO_010081: RFER_RS01550
subclass of: SO_0000673
so part of: RFER_RS01550
location: 310387..311211
location: region:310387-311211:1
so has part: feature:310387-311211:1:exon

WP_041790010.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:310387-311211:1:exon

RFER_RS01555
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01555
old locus tag: Rfer_0311
so part of: sequence
location: 311249..312094
location: region:311249-312094:1
so has part: feature:311249-312094:1:exon
subclass of: SO_0000010

position:311249:1
position: 311249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312094:1
position: 312094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311249-312094:1:exon

RFER_RS01555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01555
old locus tag: Rfer_0311
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018421929.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta hydrolase
translation: MSYNHLTATTRFVEVDGDKFAYRRWGNATSDQPPMLLLQHFRGGMDHWDPLMTDGLAEGREVILYNGRGIASSGGKPRTRIEDMADDAAAFVRALGLQQIDLLGFSLGGFQALDLTWRHPTLVRKLMLLGTGPRGGNPDMEQRVLTTAVNPVPDFEDFLYLFFGRSAQAEQAAKAFWERRHQRKDQDPPSSQEAGIAQIEANILYLPRLSEDDPFAYLRGVHHPTFILNGVNDVMVPTINSFYMARNMPNAQLFIYPDAGHAAQFQYPQRFLRHAVQFLSE
SIO_010081: RFER_RS01555
subclass of: SO_0000673
so part of: RFER_RS01555
location: 311249..312094
location: region:311249-312094:1
so has part: feature:311249-312094:1:exon

WP_011462639.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:311249-312094:1:exon

RFER_RS01560
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01560
old locus tag: Rfer_0312
so part of: sequence
location: 312148..312546
location: region:312148-312546:1
so has part: feature:312148-312546:1:exon
subclass of: SO_0000010

position:312148:1
position: 312148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312546:1
position: 312546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312148-312546:1:exon

RFER_RS01560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01560
old locus tag: Rfer_0312
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018609943.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLKFKFLLWALAQMLQRKIKHSPDCAQYVGAKRLLFQIRTASGAGRHYVIENGAIQSFAGLSPNAQFTLSFTNAAKGFSILSAKDAQAAFIRGVGSKDLTISGDFREVMWFQGLTAFLQPPKIVSPYDRTAF
SIO_010081: RFER_RS01560
subclass of: SO_0000673
so part of: RFER_RS01560
location: 312148..312546
location: region:312148-312546:1
so has part: feature:312148-312546:1:exon

WP_011462640.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:312148-312546:1:exon

RFER_RS01565
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01565
old locus tag: Rfer_0313
so part of: sequence
location: 312554..313798
location: region:312554-313798:1
so has part: feature:312554-313798:1:exon
subclass of: SO_0000010

position:312554:1
position: 312554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313798:1
position: 313798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312554-313798:1:exon

RFER_RS01565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01565
old locus tag: Rfer_0313
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018421931.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH:flavin oxidoreductase/NADH oxidase family protein
translation: MKTDLLNQPLTLRNGTVLRNRLAKAAMSETLATYDNRPTPDFVRLYRRWGSSGLGMILTGNVMIDRRALGEPGNVAIEDETDLSVLRQWAQAATEQGTAIWVQLNHPGKQSTKGLNAYNLAPSAVPFREDMAAIFETPREATPSEIQDIIERFGRSAAICKKAGFSGVQIHGAHGYLVSQFLSPHHNRRNDEWGGTSEKRRRFVLAVYAEIRRQVGPDFPVAIKLNSADFQRGGFTEEESLETIRALADAGIDLIEISGGTYEMPAMGGATQEPQKVSTVAREAYFIEFAEKVRAAVKVPLMVTGGFRTAAGMNAALRSGALDVVGLARLLAIDPDAPAALLQGRDSPQQVRPIKTGIKAVDRMGMMEVWWYERQLKRIARGQSPRPNESGLSAFLKSAASSGWGTFRTRRMRA
SIO_010081: RFER_RS01565
subclass of: SO_0000673
so part of: RFER_RS01565
location: 312554..313798
location: region:312554-313798:1
so has part: feature:312554-313798:1:exon

WP_011462641.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:312554-313798:1:exon

RFER_RS01570
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01570
old locus tag: Rfer_0314
so part of: sequence
location: 313865..315076
location: region:313865-315076:1
so has part: feature:313865-315076:1:exon
subclass of: SO_0000010

position:313865:1
position: 313865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315076:1
position: 315076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313865-315076:1:exon

RFER_RS01570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01570
old locus tag: Rfer_0314
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003803419.1
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MFHSVRRPDLLIIVLASAGILMVTMGIRQSFGLFVSPVNTSTGLGVVTISFALAIGQFTWGAVQPVAGAIADHYGPRPVLIAGLVILALGCLITPFVSSGFGLAASLGLLASVGSGMGSFSVLIGAAARRLPVESRGAASGIINAGGSFGQFVFAPLLQKLIQSIGWMGAIGSMAIVALAAIPLVSRVTGTQPALDAHGVHNGGLKRAILDALKNPSYLLLHAGFFTCGFHIAFLVTHLPGEVGLCGLPPNVASWSLALIGIANILGSLIAGSFVAKYRSKYILSVMYGSRTLLILGYLMMPKVEWTYYLFAIGLGLTWLATVPPTAAIVGKLFGTRYLATLFGLTLLSHQIGGFLGAWLGGISMSQFGDFTWMWYADMVLAALAALLNLPIREERVKRLVTA
SIO_010081: RFER_RS01570
subclass of: SO_0000673
so part of: RFER_RS01570
location: 313865..315076
location: region:313865-315076:1
so has part: feature:313865-315076:1:exon

WP_011462642.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:313865-315076:1:exon

RFER_RS01575
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01575
old locus tag: Rfer_0315
so part of: sequence
location: 315154..315717
location: region:315154-315717:1
so has part: feature:315154-315717:1:exon
subclass of: SO_0000010

position:315154:1
position: 315154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315717:1
position: 315717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315154-315717:1:exon

RFER_RS01575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01575
old locus tag: Rfer_0315
EC number: 3.1.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008112412.1
GO function: GO:0047617 - acyl-CoA hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PaaI family thioesterase
translation: MNVDQVVANWMAEEEETCAHLIAPDIATKEQLAGLSGMEFFERIRTGKLPPAPIGETLDFVAIRIEPGSVVFQGRPHRRHYNPLGTVHGGWFATLLDTAVGCAVHSTLQAGKGFTTLELKVNMVRALTDRVPLIRAIGKLVHAGRQVATAEGRIVGPDGKLYAHATTTCLIFDHPKVKMGSGTAPSR
SIO_010081: RFER_RS01575
subclass of: SO_0000673
so part of: RFER_RS01575
location: 315154..315717
location: region:315154-315717:1
so has part: feature:315154-315717:1:exon

WP_011462643.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:315154-315717:1:exon

RFER_RS23270
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS23270
old locus tag: Rfer_0316
so part of: sequence
location: 316029..316151
location: region:316029-316151:1
so has part: feature:316029-316151:1:exon
subclass of: SO_0000010

position:316029:1
position: 316029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316151:1
position: 316151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:316029-316151:1:exon

RFER_RS23270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS23270
old locus tag: Rfer_0316
inference: COORDINATES: protein motif:HMM:NF019540.2
GO function: GO:0003729 - mRNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system HicA family toxin
translation: MKHIVILAVQPNKVTVPHPKKDLPQPTQRSILKQAGLADH
SIO_010081: RFER_RS23270
subclass of: SO_0000673
so part of: RFER_RS23270
location: 316029..316151
location: region:316029-316151:1
so has part: feature:316029-316151:1:exon

WP_244095778.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:316029-316151:1:exon

RFER_RS01580
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01580
old locus tag: Rfer_0318
so part of: sequence
location: complement(316348..317961)
location: region:316348-317961:-1
so has part: feature:316348-317961:-1:exon
subclass of: SO_0000010

position:316348:-1
position: 316348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317961:-1
position: 317961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:316348-317961:-1:exon

RFER_RS01580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01580
old locus tag: Rfer_0318
inference: COORDINATES: protein motif:HMM:NF012935.2
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GMC family oxidoreductase
translation: MKFDFDWLVIGSGFGGSVSALRLTEKGYSVGVLERGRRFRDEDLAESAWQLGRFVWAPILGLKGVMRMRVFRHVFFPSQSAVGGGSTVYGGVLYRARDKFFENAQWRGLGDWARELRPHYEQAERMLGVSTVPFTSTNQRLALSMARHFGREDDFVLSPTGVYFGDPGVTVKDPFFGGQGPDRTGCMRCGSCMVGCRTGAMNTLTKNYLWFAEKLGAQIKAEREVVDVRPIGAADGSEGYQVTTQRPGAWFGRGRQVHTARGIVLAGGTLGTNELLANCKLSGSLPRISDRLGDLVRTNSESVLNVRLPTDMETWKDVTASSCVRLDDETQIEFLTYGRRADLMGMMYTLLVGRGNRVTRPLKWLGAITHHPVQWLKTLWPFGWSRHMVTLLVMQTLDNAIALKPRKRWLGGGWRVVTEQNRERPNPTYIDVANQATQWLARHTGGIAQSNIVEALANIPTTAHVLGGAVIGADASSGVIDQQLRIFGYKNMLVCDGSAMPANPGVNPALTITALAEYAMSHVPSATTHRLGTAGQP
SIO_010081: RFER_RS01580
subclass of: SO_0000673
so part of: RFER_RS01580
location: complement(316348..317961)
location: region:316348-317961:-1
so has part: feature:316348-317961:-1:exon

WP_011462645.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:316348-317961:-1:exon

RFER_RS01585
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01585
old locus tag: Rfer_0319
so part of: sequence
location: complement(318065..318766)
location: region:318065-318766:-1
so has part: feature:318065-318766:-1:exon
subclass of: SO_0000010

position:318065:-1
position: 318065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318766:-1
position: 318766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318065-318766:-1:exon

RFER_RS01585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01585
old locus tag: Rfer_0319
inference: COORDINATES: protein motif:HMM:NF024895.2
GO component: GO:0019867 - outer membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: OmpW family outer membrane protein
translation: MYTKRLNPICAATLAIAASLPMAAHADDPDNIFRIGYAHVGFDLKSSDLTGPPGTTPPGLRINVKDLDILALSYERRLSPNWGVQFQAGIPPTLTTVGAGAAVPVGTVAKARIWFPTVLARYTFTGVPTVRPYVGVGVTYTFFTDEEVTTGYTAALQGSSSSMKLEDSWSPYVRLGVEYPIDKNWIVNVEYSTFQIKSTATVVTQTPGLGPIPRRVDIKDTPQIFGVTIGYRF
SIO_010081: RFER_RS01585
subclass of: SO_0000673
so part of: RFER_RS01585
location: complement(318065..318766)
location: region:318065-318766:-1
so has part: feature:318065-318766:-1:exon

WP_011462646.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:318065-318766:-1:exon

RFER_RS01590
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01590
old locus tag: Rfer_0320
so part of: sequence
location: complement(318867..319676)
location: region:318867-319676:-1
so has part: feature:318867-319676:-1:exon
subclass of: SO_0000010

position:318867:-1
position: 318867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319676:-1
position: 319676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318867-319676:-1:exon

RFER_RS01590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01590
old locus tag: Rfer_0320
inference: COORDINATES: protein motif:HMM:NF006123.0
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MSMTGSAHQSRPAIFVTGAATGIGRACAERFARHGWFVGLYDIDADGAAEVAATLEHGCVVAGALDVTDPDAWRVALAQFWEKSGQRLDVLFNNAGVLTAGPFETVELARHQGMLNVNVLGMINGCHSAFDYLRRTPGARVINMASATAIYGQPDLVTYSATKFAVRGFTEGLELEWHRHGIRVSDVWPSFVRTDMAKKFERIASAKSLGVRLMPDDVAATVWACATSQSLVPKTHWTVGLQARLLAIATSVSPAPISRWVVRQLAHQT
SIO_010081: RFER_RS01590
subclass of: SO_0000673
so part of: RFER_RS01590
location: complement(318867..319676)
location: region:318867-319676:-1
so has part: feature:318867-319676:-1:exon

WP_244095779.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:318867-319676:-1:exon

RFER_RS01595
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01595
old locus tag: Rfer_0321
so part of: sequence
location: complement(319673..321130)
location: region:319673-321130:-1
so has part: feature:319673-321130:-1:exon
subclass of: SO_0000010

position:319673:-1
position: 319673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321130:-1
position: 321130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:319673-321130:-1:exon

RFER_RS01595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01595
old locus tag: Rfer_0321
inference: COORDINATES: protein motif:HMM:NF012711.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AMP-binding protein
translation: MTRFSDLPSSRAAAAPDAPCIADASAALSNSDFHLCVLRAAGVFETHGIKAGDVVALMLPNQAEFVVAMFAAWHLGAAMTPINPALTQKEASHQIVDSRAKLLINSTGEAVVAGVTTLPATAQKDGPRHEGKPVDDPSALALLIYTSGTTGLPKGVMLDHANIEAMTEMGREGLQITSADHCLLILPLFHVNGIVVSVLTPLASGAHVTIRRRFDIDTFFADIERLRPTFFSAVPTIYTMLGALPSDVRPDVSSLRYGVCGAAPASAELLTGFEARYGFPLVEAYGLSEGTCGSTLNPVDGVRKAGTVGLPLPGQKIAIADGKGAHLPPGSTGEVLVAGPNVMRGYLNQPDATAKTIVNGWLHTGDIGRIDDDGYLSIVGRLKEMIIRGGENIYPKEIEDVLVEHPSVLEAAVVGAPDERLGEIVVAFVSRRPGATVTVDALNAHCASRLARHKLPAIIHIIESLPKNAVGKIAKPVLREQVRGQ
SIO_010081: RFER_RS01595
subclass of: SO_0000673
so part of: RFER_RS01595
location: complement(319673..321130)
location: region:319673-321130:-1
so has part: feature:319673-321130:-1:exon

WP_041791234.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:319673-321130:-1:exon

RFER_RS01600
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01600
old locus tag: Rfer_0322
so part of: sequence
location: complement(321278..321727)
location: region:321278-321727:-1
so has part: feature:321278-321727:-1:exon
subclass of: SO_0000010

position:321278:-1
position: 321278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321727:-1
position: 321727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321278-321727:-1:exon

RFER_RS01600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01600
old locus tag: Rfer_0322
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017452027.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2147 domain-containing protein
translation: MKLNTLALVTLSAACMALPASANEASPTGLWKNIDDATGKPRGMIRITESNGTLQGKIEKLFPAPNEDLNPTCKKCEGTLKDAPVIGLTILSGMSKEGDQYAGGQILDPDNGKTYRSQLRLIEDGKKLEVRGYIGVPLLGRSQTWVRQE
SIO_010081: RFER_RS01600
subclass of: SO_0000673
so part of: RFER_RS01600
location: complement(321278..321727)
location: region:321278-321727:-1
so has part: feature:321278-321727:-1:exon

WP_041790015.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:321278-321727:-1:exon

RFER_RS01605
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01605
old locus tag: Rfer_0323
so part of: sequence
location: complement(321747..322697)
location: region:321747-322697:-1
so has part: feature:321747-322697:-1:exon
subclass of: SO_0000010

position:321747:-1
position: 321747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:322697:-1
position: 322697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321747-322697:-1:exon

RFER_RS01605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01605
old locus tag: Rfer_0323
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012372481.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta fold hydrolase
translation: MNRSSKQHMQVVRHDVRFDSGETYCSAWLFLPVGVERPPVVVLGHGLGAIREMRLDAFAERFAAQGIAALAFTYRYFGDSGGQPRQLMSVPRQLEDWEAALNFVKSRQDLDDSRLAVWGSSFGGGHSITMASRHPELRAAVAQCPFSDGLASATAQGLIAGMKGSMRLLPLAMRDFAARRKGRAPVTVPIAGDPGQLALMSTHDALNGYLKLVPKGSEFVNHVAARVIPEIVRYRPGLSAHKIKCPILFCVSETDTVTPPGRTLVLARRAPRGDIKCYNAGHFDFYLGAVFEQLVSDQSRFLVEHLVPTTPHPISH
SIO_010081: RFER_RS01605
subclass of: SO_0000673
so part of: RFER_RS01605
location: complement(321747..322697)
location: region:321747-322697:-1
so has part: feature:321747-322697:-1:exon

WP_011462650.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:321747-322697:-1:exon

RFER_RS01610
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01610
old locus tag: Rfer_0324
so part of: sequence
location: complement(322694..323668)
location: region:322694-323668:-1
so has part: feature:322694-323668:-1:exon
subclass of: SO_0000010

position:322694:-1
position: 322694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323668:-1
position: 323668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:322694-323668:-1:exon

RFER_RS01610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01610
old locus tag: Rfer_0324
inference: COORDINATES: protein motif:HMM:NF012596.2
GO function: GO:0003824 - catalytic activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: enoyl-CoA hydratase/isomerase family protein
translation: MSNTPPMPGRINVESLDSVWVAHLDGGAFGLMGLNMAEELAALLDRVEANAAVDAVVFTGMHPGRFIGHADVRWLQEGGASIPRLGLGTSSAVARASKAVRGVPGLEAIAGLTPLDGGMQLDKLHETFFRMNRSGVIFIAALNGSALGLGSEFAQACDVRLMADGDFFIGQPEVLLGINPGGGGTQRLPRLVGNHRALLLMLEGRPVPPRKALEIGYIDEVVPPDELLERAIARARYLGCRPRKARQAIKRAVYIGGSATLEEGLHMERTEFIHISPSETAQTLMSEYLRRTDQDGDVPFYNPEILEETLQHGSLPVQGKGSNK
SIO_010081: RFER_RS01610
subclass of: SO_0000673
so part of: RFER_RS01610
location: complement(322694..323668)
location: region:322694-323668:-1
so has part: feature:322694-323668:-1:exon

WP_011462651.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:322694-323668:-1:exon

RFER_RS01615
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01615
old locus tag: Rfer_0325
so part of: sequence
location: 323822..324535
location: region:323822-324535:1
so has part: feature:323822-324535:1:exon
subclass of: SO_0000010

position:323822:1
position: 323822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324535:1
position: 324535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323822-324535:1:exon

RFER_RS01615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01615
old locus tag: Rfer_0325
inference: COORDINATES: protein motif:HMM:NF024701.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TetR/AcrR family transcriptional regulator
translation: MVNPDPRSRLLKAAIRLLATHGPTEIKARSVSSEAGLSTMGVYTHFGGVSELLQAVAEEGFRQQADIFRQVANTQDAMTDLCAIALACRDFAMRNAHLYDLMFGLSIQGRYGPVRGESTTAPKVGADAFMASYSHLRGGCERLIKGNCVRQMEPDLMAAQLWSTLHGFILLELGGHFAATLNPPIEILVPMCINLVVGLGADRERAKASAAIAVADWASRQCDTKSMAQFLNAVNTI
SIO_010081: RFER_RS01615
subclass of: SO_0000673
so part of: RFER_RS01615
location: 323822..324535
location: region:323822-324535:1
so has part: feature:323822-324535:1:exon

WP_011462652.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:323822-324535:1:exon

RFER_RS24795
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS24795
so part of: sequence
location: 324784..324909
location: region:324784-324909:1
so has part: feature:324784-324909:1:exon
subclass of: SO_0000010

position:324784:1
position: 324784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324909:1
position: 324909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324784-324909:1:exon

RFER_RS24795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS24795
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTDTHFFTINIGKRALVTGASSGIGAAIYHCCSCNHVRIRN
SIO_010081: RFER_RS24795
subclass of: SO_0000673
so part of: RFER_RS24795
location: 324784..324909
location: region:324784-324909:1
so has part: feature:324784-324909:1:exon

WP_279587690.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:324784-324909:1:exon

RFER_RS01620
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01620
so part of: sequence
location: 325051..325545
location: region:325051-325545:1
so has part: feature:325051-325545:1:exon
subclass of: SO_0000010

position:325051:1
position: 325051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325545:1
position: 325545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:325051-325545:1:exon

RFER_RS01620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01620
inference: COORDINATES: protein motif:HMM:NF014639.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: disulfide bond formation protein B
translation: MFDFFARPNRMLLIFGTLCLGAVIAAVSVGLTFSLEVCSMCWFQRLALILAAIGLLLTATGSAIRRTAQRAAELSFVLGWVSSCRQVYLLFHQEAAIGSCGRGLVYFFKNGNYFGFFRSGLVGGMECATDQAAFLGLPIPVLSLMVFTGIGLMYLYWLISMPDQ
SIO_010081: RFER_RS01620
subclass of: SO_0000673
so part of: RFER_RS01620
location: 325051..325545
location: region:325051-325545:1
so has part: feature:325051-325545:1:exon

WP_041790018.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:325051-325545:1:exon

RFER_RS01625
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01625
old locus tag: Rfer_0326
so part of: sequence
location: 325664..326134
location: region:325664-326134:1
so has part: feature:325664-326134:1:exon
subclass of: SO_0000010

position:325664:1
position: 325664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326134:1
position: 326134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:325664-326134:1:exon

RFER_RS01625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01625
old locus tag: Rfer_0326
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014426277.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CreA family protein
translation: MKLRHTIAFAISIPFASATIAQQIGEVDTAFKLLGPDHKIVVEAFDDPKVAGITCYVSRSKAGGLKGALGVATEKSESSIACRQVGLISSTVPIPKSEEVFSESRSLLFKKMRVVRMVDPTRQVLLYLTYSDKLVDGSPKNSLTAVPLNGAKLQFK
SIO_010081: RFER_RS01625
subclass of: SO_0000673
so part of: RFER_RS01625
location: 325664..326134
location: region:325664-326134:1
so has part: feature:325664-326134:1:exon

WP_011462653.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:325664-326134:1:exon

RFER_RS01630
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01630
old locus tag: Rfer_0327
so part of: sequence
location: complement(326141..327445)
location: region:326141-327445:-1
so has part: feature:326141-327445:-1:exon
subclass of: SO_0000010

position:326141:-1
position: 326141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327445:-1
position: 327445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326141-327445:-1:exon

RFER_RS01630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01630
old locus tag: Rfer_0327
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013594444.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lytic murein transglycosylase
translation: MATTPYFFAPAGHGLVPALLAILALAGCASTPSVEPGAAAPSTTSANPTPAGATPATLDAVENSQKFARWVAEFSATARTAGIDEATLHIAFDNARFLPRVIESDRAQPEFTRTPWDYLDTAVSALRVTRGQDKLLQLRQQIDPIAVRYGVPTEVLLAIWGMESSYGSFVGDLPTIDALATLGFEGRREAWARNQLLVALKILQSHDIVRVQMVGSWAGAMGQTQFLPSVFLAYAVDADGDGRRDIWGSVPDVMASTANFLVGSGWQAGQPWGAEVRLPPGFDYARTDADVRQPTAAWVGAGVQAMDGTVLPSFADGSILLPAGARGPAFLVGSNFRTILRYNNSTSYALGVHLLAQRLAGGPAIQAAWPRDLHALTSDQMLALQTALNARGFDSGTPNGKMGPATQRGIRRYQRSLDLPTDGYPTLDLLQRLQ
SIO_010081: RFER_RS01630
subclass of: SO_0000673
so part of: RFER_RS01630
location: complement(326141..327445)
location: region:326141-327445:-1
so has part: feature:326141-327445:-1:exon

WP_011462654.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:326141-327445:-1:exon

RFER_RS01635
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01635
old locus tag: Rfer_0328
so part of: sequence
location: complement(327448..328236)
location: region:327448-328236:-1
so has part: feature:327448-328236:-1:exon
subclass of: SO_0000010

position:327448:-1
position: 327448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328236:-1
position: 328236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327448-328236:-1:exon

RFER_RS01635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01635
old locus tag: Rfer_0328
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007848971.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHIVVNEDLKAYIDPLTPDEHDALERSLLAEGCRDALVLWGDVLVDGHNRYGICQKHGIPFQTLQSTLFTSMEDVHLWMIDQHLGRRSVSDFQRGVLALRKREILNDRRLKAAPPVGPGSTAPAFETTDASTPAAPATTEPLKSREDIAKAARLSSSQVVLIEKIQKQAAPEVVAAVKSGAISLNAAAAVATLPEQEQVAAAQGGKELLRQAAKRVRESKKRAPVDEAQDSAEDSVAALKARVTELEAENAKLRAQLATLMG
SIO_010081: RFER_RS01635
subclass of: SO_0000673
so part of: RFER_RS01635
location: complement(327448..328236)
location: region:327448-328236:-1
so has part: feature:327448-328236:-1:exon

WP_011462655.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:327448-328236:-1:exon

RFER_RS01640
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01640
old locus tag: Rfer_0329
so part of: sequence
location: complement(328325..329281)
location: region:328325-329281:-1
so has part: feature:328325-329281:-1:exon
subclass of: SO_0000010

position:328325:-1
position: 328325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329281:-1
position: 329281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328325-329281:-1:exon

RFER_RS01640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01640
old locus tag: Rfer_0329
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012206246.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Gfo/Idh/MocA family oxidoreductase
translation: MSKIIKVALAGAGAFGIKHLDGIQNIDGVEVVSLVSRDLEKTKEVAARYGIKHVTTELADSLALPEVDAVILCTPTQMHAAQSIACLKAGKHVQVEIPLADTLHGALEVAAMQEQTGLVAMCGHTRRFNPSHQYVHRQIAAGKFNIQQMDVQTYFFRRTNMNALGQARSWTDHLLWHHAAHTVDLFAYQCGSPIVKANAVQGPIHPVLGIAMDMSIQLKAANGAICTLSLSFNNDGPLGTFFRYIGDTATYIARYDDLFTAKEEKIDVSQVDVSMNGIELQDREFFAAIREGRAPNSSVAQLLPCYQVLHDLEQQLLS
SIO_010081: RFER_RS01640
subclass of: SO_0000673
so part of: RFER_RS01640
location: complement(328325..329281)
location: region:328325-329281:-1
so has part: feature:328325-329281:-1:exon

WP_011462656.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:328325-329281:-1:exon

RFER_RS01645
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01645
old locus tag: Rfer_0330
so part of: sequence
location: complement(329282..330163)
location: region:329282-330163:-1
so has part: feature:329282-330163:-1:exon
subclass of: SO_0000010

position:329282:-1
position: 329282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330163:-1
position: 330163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329282-330163:-1:exon

RFER_RS01645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01645
old locus tag: Rfer_0330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019042090.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class III extradiol dioxygenase subunit beta
translation: MAKITASVYTSHVPAIGAAIDLGKTQEPYWQPLFKGYEFSKQWMKDNKPDVIFLVYNDHATAFSLDMIPTFAIGTAAQFLPADEGFGPRPVPKVIGHPDLASHIAHSVIQQDFDLTIVNKMEVDHGLTVPLSLMCGQPDAWPCPVIPFAVNVVQYPVPSGQRCFNLGKAIRKAVESYDQDLKVQIWGTGGMSHQLQGPRAGLINKEFDNAFLDRLIADPQGQASVPHIDYVREAGSEGVELVMWLIARGAMDDVAGNAANSIATHAGSVRVRHRFYHVPASNTAVGHLILENI
SIO_010081: RFER_RS01645
subclass of: SO_0000673
so part of: RFER_RS01645
location: complement(329282..330163)
location: region:329282-330163:-1
so has part: feature:329282-330163:-1:exon

WP_011462657.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:329282-330163:-1:exon

RFER_RS01650
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: ligA
locus tag: RFER_RS01650
old locus tag: Rfer_0331
so part of: sequence
location: complement(330166..330609)
location: region:330166-330609:-1
so has part: feature:330166-330609:-1:exon
subclass of: SO_0000010

position:330166:-1
position: 330166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330609:-1
position: 330609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330166-330609:-1:exon

RFER_RS01650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: ligA
locus tag: RFER_RS01650
old locus tag: Rfer_0331
EC number: 1.13.11.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011801417.1
GO function: GO:0018579 - protocatechuate 4,5-dioxygenase activity [Evidence IEA]
GO process: GO:0046278 - 3,4-dihydroxybenzoate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protocatechuate 4,5-dioxygenase subunit alpha
translation: MALDKPYKDIPGTIIFDADQSRKGYHLNQFCMSLMKAENRERFKRDQRAYLDEWPMSEEQKQAVLDMDLNRAMALGGNIYFLAKIGATHGKSFQQMAGSMTGMSEEEYRAMMLAGGRSIEGNRHLGEDGDAQPQHQPQGQAGRKASV
SIO_010081: RFER_RS01650
subclass of: SO_0000673
so part of: RFER_RS01650
location: complement(330166..330609)
location: region:330166-330609:-1
so has part: feature:330166-330609:-1:exon

WP_011462658.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:330166-330609:-1:exon

RFER_RS01655
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01655
old locus tag: Rfer_0332
so part of: sequence
location: complement(330617..331558)
location: region:330617-331558:-1
so has part: feature:330617-331558:-1:exon
subclass of: SO_0000010

position:330617:-1
position: 330617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331558:-1
position: 331558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330617-331558:-1:exon

RFER_RS01655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01655
old locus tag: Rfer_0332
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013901808.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amidohydrolase family protein
translation: MSKPTTGDFTQSEAFTKTPGWLDWYSGPAKPRFQLPAGSVDAHCHVFGPGAEFPYAPERKYTPCDASKAQLFALRDHLGFEKNVIVQATCHGADNRALVDALRSSKGKARGVATVKRSVSDAELQAMHDAGVRGVRFNFVKRLVDFTPKDELMEIAARIKAWGWHVVIYFEAVDLPELWDFFTALPTTVVVDHMGRPDVSLPVDGPQFALFQKFMREHGNVWSKVSCPERLSLTGPKALNGEQNAYRDVIPFAKAIVEEFSDRVLWGTDWPHPNLKDHMPDDGLLVDFIPHIAPTPELQRKLLVDNPNRLYWS
SIO_010081: RFER_RS01655
subclass of: SO_0000673
so part of: RFER_RS01655
location: complement(330617..331558)
location: region:330617-331558:-1
so has part: feature:330617-331558:-1:exon

WP_011462659.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:330617-331558:-1:exon

RFER_RS01660
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01660
old locus tag: Rfer_0333
so part of: sequence
location: 331910..332434
location: region:331910-332434:1
so has part: feature:331910-332434:1:exon
subclass of: SO_0000010

position:331910:1
position: 331910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:332434:1
position: 332434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:331910-332434:1:exon

RFER_RS01660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01660
old locus tag: Rfer_0333
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010398132.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MepB family protein
translation: MPHLDSMDLHALVKNVYESAGMKLSDAVVREMESADYGACRFEVDAKRVVFRVAKTTPTKVGQFVTLWKRPQPSGVIAPIDANDPVDFVVVYTSNTESCGQFVFDKSILIKMGILSSQKHAGKRAIRVYPPWSHPVAKQAVKTQSWQLPYFLELAEDGSTDLARARKLFACDHV
SIO_010081: RFER_RS01660
subclass of: SO_0000673
so part of: RFER_RS01660
location: 331910..332434
location: region:331910-332434:1
so has part: feature:331910-332434:1:exon

WP_011462660.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:331910-332434:1:exon

RFER_RS01665
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01665
old locus tag: Rfer_0334
so part of: sequence
location: 332568..333386
location: region:332568-333386:1
so has part: feature:332568-333386:1:exon
subclass of: SO_0000010

position:332568:1
position: 332568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333386:1
position: 333386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332568-333386:1:exon

RFER_RS01665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01665
old locus tag: Rfer_0334
inference: COORDINATES: protein motif:HMM:NF024109.2
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta hydrolase
translation: MKLHQFGSTHGKLVIYFHGAPGAPEEGQLFDLEAKKHGLTVLCLDRFAIHPSITGEAYYRLLAEEIAKEAGGQAVDFIGFSIGAFIALQTCRYMPNGVTSLHLVSAAAPLEAGEFLPAMAGQQVFQLAKAAPVLFLLLSYWQSLLAWLAPKALFRLLFASAEGADKALAADPEFQARITAILRSCFLGRVRGYARDVGAYVQPWSATLADIAVPTHLWHGDADNWSPPQMAHYLASAIPGAASAQSFSGLSHYSCLYRAVPEICRVLGRAYT
SIO_010081: RFER_RS01665
subclass of: SO_0000673
so part of: RFER_RS01665
location: 332568..333386
location: region:332568-333386:1
so has part: feature:332568-333386:1:exon

WP_244095780.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:332568-333386:1:exon

RFER_RS01670
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01670
old locus tag: Rfer_0335
so part of: sequence
location: 333720..335267
location: region:333720-335267:1
so has part: feature:333720-335267:1:exon
subclass of: SO_0000010

position:333720:1
position: 333720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335267:1
position: 335267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333720-335267:1:exon

RFER_RS01670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01670
old locus tag: Rfer_0335
inference: COORDINATES: protein motif:HMM:NF014825.2
GO function: GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SEC-C metal-binding domain-containing protein
translation: MKAITRSKGVTDTERVLARLCDQTFLDLWSYPSLYTSEGRKGDKGVGKELCDMLVVFGSDLLIFSDKDISFNAEIDVTIAWPRWRRKSIDESKSQLYGAYKWLKEHPGKLYFDPQCQKPFPFIEPGTDYRIHLIAVTKNTQKAAAELFGMNSSGSFILYSVDADEIDDHPFSVLDDRSKPYVHVFDEVTLELVLRELDTAPDFIKYLKVKEDAIRRGRIRVITGEEELLAVYMKQGGPMVDKPFAEYEKAAPAEFEIIQIPEGEWADYVNSGARARLKQLHKGSYFWDELISRFTKAILTATAPNPLNASVNMHETAVRMLASETRFTRGQLAKEYQAKIRGTPSHVRTSKIFRSPITPHACIILVIIPQDVGQTSDEYRARRLDLLYAYGLVAKLKMPDLTIFTMIGTEPGGSELRSEDVLALKIEKLGPEEVAQAQTLMKDGKILSHVWHEKPAGNAVISAFKAPKKNTTYRNKMFTPGRNDPCPCNSGLKFKKCCFGRNEDIGVLYGLAKPR
SIO_010081: RFER_RS01670
subclass of: SO_0000673
so part of: RFER_RS01670
location: 333720..335267
location: region:333720-335267:1
so has part: feature:333720-335267:1:exon

WP_049765598.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:333720-335267:1:exon

RFER_RS01675
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01675
old locus tag: Rfer_0336
so part of: sequence
location: complement(335656..336582)
location: region:335656-336582:-1
so has part: feature:335656-336582:-1:exon
subclass of: SO_0000010

position:335656:-1
position: 335656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336582:-1
position: 336582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335656-336582:-1:exon

RFER_RS01675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01675
old locus tag: Rfer_0336
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012348635.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)-dependent oxidoreductase
translation: MNNPIDWKVGLVGYGEVGRILAEDLRAQGVAVSAYDIKLDQPATAAPLQAHAAQHGVQLATNSAALAAQADFIVSAVTASQTVGVAQACAPAVQPGTFFLDFNSASPGAKQRAASLIDAAGGRYVEGAVMTSVPPYRIKVPLLLGGVFATELAPLINSLGFAAKVASDKLGVASATKMCRSVMIKGLEAMVIESFTTARHYGVEDAVVASLYETFPGIDWEKQAAYFFQRVIEHGRRRSEEVREVAETVVDAGLTPWSATGTAERQTWVADGADQGWFGEKGTPEFARSADWRVEADRMLAHSRLKSD
SIO_010081: RFER_RS01675
subclass of: SO_0000673
so part of: RFER_RS01675
location: complement(335656..336582)
location: region:335656-336582:-1
so has part: feature:335656-336582:-1:exon

WP_011462663.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:335656-336582:-1:exon

RFER_RS01680
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: ligK
locus tag: RFER_RS01680
old locus tag: Rfer_0337
so part of: sequence
location: complement(336627..337310)
location: region:336627-337310:-1
so has part: feature:336627-337310:-1:exon
subclass of: SO_0000010

position:336627:-1
position: 336627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337310:-1
position: 337310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336627-337310:-1:exon

RFER_RS01680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: ligK
locus tag: RFER_RS01680
old locus tag: Rfer_0337
EC number: 4.1.1.112
EC number: 4.1.3.17
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007863804.1
GO function: GO:0047443 - 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase
translation: MNQLGIVKRNITRAEPAAVEKLSRFGVATIHEAMGRVGLMKPYMRPIYNEARICGTAVTVLLQPGDNWMMHVAAEQLQPGDVAVAACTTDNADGFFGDLLATSFQARGAVGLIIDGGVRDVKDLTEMKFPVFSKAIHAKGTIKATLGSVNVPVVCAGAQVNPGDVVIADIDGVVVVPAAIAQKVADAAEAREANEGDKRAIFASGVLGLDYYKMREGLAKAGLRYID
SIO_010081: RFER_RS01680
subclass of: SO_0000673
so part of: RFER_RS01680
location: complement(336627..337310)
location: region:336627-337310:-1
so has part: feature:336627-337310:-1:exon

WP_011462664.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:336627-337310:-1:exon

RFER_RS01685
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01685
old locus tag: Rfer_0338
so part of: sequence
location: complement(337394..338422)
location: region:337394-338422:-1
so has part: feature:337394-338422:-1:exon
subclass of: SO_0000010

position:337394:-1
position: 337394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338422:-1
position: 338422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337394-338422:-1:exon

RFER_RS01685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01685
old locus tag: Rfer_0338
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019430297.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amidohydrolase family protein
translation: MIIDCHGHYTTAPKALETWRNQQIAGIKDPSSMPKIADLKISDDELIETIETNQLRLMKERGSDLTLFSPRASFMAHHIGDFNVSSTWAAICNELCYRVSTLFPDHFVPVAMLPQSPGVDPATCIPELEKCVKEYGAVGINLNPDPSGGHWTSPPLSDKHWYPIYEKMVEYDLPAMIHVSTSCNACFHTTGAHYLNADTTAFMQCLTSDLFKEFPTLKFLIPHGGGAVPYHWGRFRGLAQELKKPLLQDHLLNNIFFDTCVYHQPGIDLLNTVIPVKNVLFASEMIGAVRGIDPETGNYYDDTKRYIEASKILSDADRQQIFEANARRVFPRLDALLTAKSQ
SIO_010081: RFER_RS01685
subclass of: SO_0000673
so part of: RFER_RS01685
location: complement(337394..338422)
location: region:337394-338422:-1
so has part: feature:337394-338422:-1:exon

WP_011462665.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:337394-338422:-1:exon

RFER_RS01690
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: pobA
locus tag: RFER_RS01690
old locus tag: Rfer_0339
so part of: sequence
location: complement(338499..339692)
location: region:338499-339692:-1
so has part: feature:338499-339692:-1:exon
subclass of: SO_0000010

position:338499:-1
position: 338499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339692:-1
position: 339692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338499-339692:-1:exon

RFER_RS01690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: pobA
locus tag: RFER_RS01690
old locus tag: Rfer_0339
EC number: 1.14.13.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010459540.1
GO function: GO:0018659 - 4-hydroxybenzoate 3-monooxygenase activity [Evidence IEA]
GO process: GO:0018874 - benzoate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4-hydroxybenzoate 3-monooxygenase
translation: MRTQVAIIGAGPSGLLLGQLLHKAGIDAVIVERVSGDYVLGRIRAGVLEQVTIDLLDEAGVGTRMHREGLVHGGFDMLYGGKRHRIDMNGLTGGKNVMVYGQTEVTHDLMDARAFAGLPTYYEASDVQVADFDTTHPRVTFTHQGQAVTLSCDFIAGCDGFHGVCRASVPRKSIQEFEKVYPFGWLGLLSDTPPVHDELIYVNSPRGFALCSQRSKTRSRYYLQVPLTDRLQDWTDDAFWQELRLRLDDDARAQLVTGPSLEKSIAPLRSFVTEPMRFGRLFLAGDAAHIVPPTGAKGLNLAATDVKYLCNALVDFYQNRSEEGIDSYSARCLRRIWKAERFSWWFTSLMHRFPDDGPITARFQEAELDYLIHSHAGSLSIAENYVGLPLDFAEPTR
SIO_010081: RFER_RS01690
subclass of: SO_0000673
so part of: RFER_RS01690
location: complement(338499..339692)
location: region:338499-339692:-1
so has part: feature:338499-339692:-1:exon

WP_041791238.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:338499-339692:-1:exon

RFER_RS01695
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01695
old locus tag: Rfer_0340
so part of: sequence
location: complement(339778..340488)
location: region:339778-340488:-1
so has part: feature:339778-340488:-1:exon
subclass of: SO_0000010

position:339778:-1
position: 339778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340488:-1
position: 340488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339778-340488:-1:exon

RFER_RS01695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01695
old locus tag: Rfer_0340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010464352.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: substrate-binding domain-containing protein
translation: MQVTATPSVAPLTGISSMATRQLLAELTTAYAERSGQTVLVESVGGVDAAKRVQAGEVFDLVVLASDAMAKLMAAGHLRADSLTPLVHSGVAVAVRAGTPAPDISSEDALRQAVLAAPTLSYSTGPSGVALARLFERWGIAERIKDRIVTAPPGVPVGSLVAKGEVALGFQQLSELIHVQGISIVGPLPSTIQITTTFSAAMTSGCTRPAEVQALLDFMASPEAAEAKQRQGMEPA
SIO_010081: RFER_RS01695
subclass of: SO_0000673
so part of: RFER_RS01695
location: complement(339778..340488)
location: region:339778-340488:-1
so has part: feature:339778-340488:-1:exon

WP_011462667.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:339778-340488:-1:exon

RFER_RS01700
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01700
old locus tag: Rfer_0341
so part of: sequence
location: 340593..341504
location: region:340593-341504:1
so has part: feature:340593-341504:1:exon
subclass of: SO_0000010

position:340593:1
position: 340593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341504:1
position: 341504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340593-341504:1:exon

RFER_RS01700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01700
old locus tag: Rfer_0341
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017404924.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR substrate-binding domain-containing protein
translation: MDLKQLEYFVRVAELGSFTRAAIALDVAQPALSRQVRLLEVELRQNLLTRNGRGALPTEAGKLLLAHGRGILHQVERAREELGRVRGSLAGRVAVGLPTSLARVLTVPLIRAFRIELPDATLAISEGLSVPMQESLIAGRLDIAVLYNAQPTAEIEITPLLEEDLLLVQRRPPGLPEDPPPGPITLRELGQLPLVIPTRPNAIRMHVESELANIGCRLNIALEIDGVSAILDLVADGAGYAVLSRNAVSSSIRPSAFSVRTITAPVLRTKVSMATSSLRPTTLTQQTTLKLLHKTICKIVGPI
SIO_010081: RFER_RS01700
subclass of: SO_0000673
so part of: RFER_RS01700
location: 340593..341504
location: region:340593-341504:1
so has part: feature:340593-341504:1:exon

WP_041791243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:340593-341504:1:exon

RFER_RS01705
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: mgrA
locus tag: RFER_RS01705
old locus tag: Rfer_0342
so part of: sequence
location: 341657..342703
location: region:341657-342703:1
so has part: feature:341657-342703:1:exon
subclass of: SO_0000010

position:341657:1
position: 341657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342703:1
position: 342703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:341657-342703:1:exon

RFER_RS01705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: mgrA
locus tag: RFER_RS01705
old locus tag: Rfer_0342
EC number: 1.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019652738.1
GO function: GO:0047834 - D-threo-aldose 1-dehydrogenase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: L-glyceraldehyde 3-phosphate reductase
translation: MTYHANPTRYDAMPYRSCGRSGLKLPAVSLGLWHNFGDATPMATQRAMLRTAFDLGITHFDLANNYGPPYGSAETNFGEHLRRDFKPYRDELIISSKAGWDMWPGPYGQGGGSRKYLLASLDQSLKRMGLDYVDIFYSHRFDPDTPLEETCGALASAVQQGKALYVGISSYSAAKTREAAAILKNMGVAPLIHQPSYSLLNRWVEEDLLDALDDTGMGCIAFSALAQGLLTDKYLNGVPADSRINRPGGGSLKAEHLSEQNLTHVRALNQIALERGQSLAQMATAWVLRDKRVTSALIGASRPAQIIELVEALQNMQFSAAELAAIDQHAVEGGINLWQRPATDQRPT
SIO_010081: RFER_RS01705
subclass of: SO_0000673
so part of: RFER_RS01705
location: 341657..342703
location: region:341657-342703:1
so has part: feature:341657-342703:1:exon

WP_011462669.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:341657-342703:1:exon

RFER_RS01710
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01710
old locus tag: Rfer_0343
so part of: sequence
location: 342770..343639
location: region:342770-343639:1
so has part: feature:342770-343639:1:exon
subclass of: SO_0000010

position:342770:1
position: 342770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343639:1
position: 343639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:342770-343639:1:exon

RFER_RS01710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01710
old locus tag: Rfer_0343
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015012203.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EamA family transporter
translation: MKANFYALAAICLWASLAALGVLLKHVPPFLLTGIALGLGSILAWPFVFKNPRQWRVAPSTLFLGVSSLFGYHFFLFIALRMAPAVEVNLINYLWPLLIVVLAPLYVPGIRLRAVHFMAAALGFAGAALAIWGGRVSTDASANLTSSATGWGYLLALAAAIVWANYSLQTKRVALSGKGFSTTAIGLFGLLAGLLSLACHWVLEPPVQLTGHDWLLLLAMGLGPLGAAFFLWDKALKLGDVRHVGILSYLTPLASTVLLMQVTGRALSWSVALAAALIIGAALLGTRKN
SIO_010081: RFER_RS01710
subclass of: SO_0000673
so part of: RFER_RS01710
location: 342770..343639
location: region:342770-343639:1
so has part: feature:342770-343639:1:exon

WP_011462670.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:342770-343639:1:exon

RFER_RS01715
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01715
old locus tag: Rfer_0344
so part of: sequence
location: 343667..344866
location: region:343667-344866:1
so has part: feature:343667-344866:1:exon
subclass of: SO_0000010

position:343667:1
position: 343667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344866:1
position: 344866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343667-344866:1:exon

RFER_RS01715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01715
old locus tag: Rfer_0344
EC number: 4.3.1.19
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007860491.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: threonine ammonia-lyase
translation: MIQLNDIQTAATRLQGQLLRTPCVASRTLSDITGAQVFLKFENLQFTASFKERGACNKLAQLSAEERQRGVIAMSAGNHAQGVAYHAQRLGLRAVIVMPRFTPGVKVERTRGFGAEIVLHGDTLDEARAHALALAEQQQLIFVHPYDDADIVAGQGTVALEMLQDVPDLDALVVSVGGGGLIAGMATAAKAIKPDIEIIGVQTVRFPAMFNAIKGTHHPQGSSSIAEGIAVGTPGQIPLAIIARLVNDLVLVDEGDIEQAIVMLLEVEKTLVEGAGAAGLAALLKYPERFKGKKVGLVLSGGNIDPLLLAAIIERGMVRAGRLARIRVSARDIPGTLAKITTTVAEAGANINEVHHQRAFTTLAAQNVEVELVIQTRGPQHIAEVLAQLHQAGLEAQLI
SIO_010081: RFER_RS01715
subclass of: SO_0000673
so part of: RFER_RS01715
location: 343667..344866
location: region:343667-344866:1
so has part: feature:343667-344866:1:exon

WP_011462671.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:343667-344866:1:exon

RFER_RS23860
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS23860
old locus tag: Rfer_0345
so part of: sequence
location: 344957..345097
location: region:344957-345097:1
so has part: feature:344957-345097:1:exon
subclass of: SO_0000010

position:344957:1
position: 344957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345097:1
position: 345097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344957-345097:1:exon

RFER_RS23860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS23860
old locus tag: Rfer_0345
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007860492.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSPASHEQAPETDAVEGVLPYMPIVLPLAGAVLIFLLAFIAVSMA
SIO_010081: RFER_RS23860
subclass of: SO_0000673
so part of: RFER_RS23860
location: 344957..345097
location: region:344957-345097:1
so has part: feature:344957-345097:1:exon

WP_166485630.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:344957-345097:1:exon

RFER_RS01720
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: speB
locus tag: RFER_RS01720
old locus tag: Rfer_0346
so part of: sequence
location: 345267..346187
location: region:345267-346187:1
so has part: feature:345267-346187:1:exon
subclass of: SO_0000010

position:345267:1
position: 345267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:346187:1
position: 346187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345267-346187:1:exon

RFER_RS01720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: speB
locus tag: RFER_RS01720
old locus tag: Rfer_0346
EC number: 3.5.3.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009515155.1
GO function: GO:0008783 - agmatinase activity [Evidence IEA]
GO process: GO:0008295 - spermidine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: agmatinase
translation: MGLGQFSYANNSNRFLAVPELAAQPFAVVGVPFDGAVTHRPGARFGPQEIRRASLMLCDGSHPFFGVSPIGHLGDALDMRLPNASPLADVRQQIQAQAAALMAGHHCVFLGGDHSVTLPLLRAARAQHGELALVHFDAHCDTWTDHFGEPSGHGTWAYEAMAEGLVSPRHTVQIGLRSSGERAAREYVQDQGGLIFTARQLRGLDGAGLQPVIAQIRTRLGQRPCYLTLDIDCLDPAFAPGTGTPEPGGLSSSQVLTLLEELAPLNMIGMDCVEVAPAYDHAELTSSAAATLVWTYLCGQVAKVLL
SIO_010081: RFER_RS01720
subclass of: SO_0000673
so part of: RFER_RS01720
location: 345267..346187
location: region:345267-346187:1
so has part: feature:345267-346187:1:exon

WP_011462673.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:345267-346187:1:exon

RFER_RS01725
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01725
old locus tag: Rfer_0347
so part of: sequence
location: 346200..347501
location: region:346200-347501:1
so has part: feature:346200-347501:1:exon
subclass of: SO_0000010

position:346200:1
position: 346200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347501:1
position: 347501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346200-347501:1:exon

RFER_RS01725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01725
old locus tag: Rfer_0347
EC number: 1.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012747142.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-binding oxidoreductase
translation: MLLASDTQLNQKSYYEASVQRAPVGPPLRGELNADVLVVGAGFAGLSAAIELAQRGYQVVVLEADRVCSGASGRNGGQAIVGFSGGQAPFDQQLGQAHARLAWDMTVEGLAMIDERVKAFQIDCDHVKGYLYLADSRRKARALEAELTTLERDYGFVTELVKGADVQRHIQSPRYCAAAFERQSGHLHPLKYGLGLARAAKALGVQIFEHSAVLAIKRGSRLMARTGAGVVTAKFGVLAGNCTLAEYGPAVAPDITPRIMPVGTYIIGTAPLAPGLCRRLIPSNASACDNNFILDYFRFSADHRMLFGGRVSYTTRTPAHLQDTLARRMGEVFPALRQVPIDFVWGGFVDISMNRAPDFGRLGDNLYYLQGFSGHGVALTGLAGRVVAQAVAGQAERFDVFAKLQHRKFPGGPLLRRPSLVLGMLYHRLRDAL
SIO_010081: RFER_RS01725
subclass of: SO_0000673
so part of: RFER_RS01725
location: 346200..347501
location: region:346200-347501:1
so has part: feature:346200-347501:1:exon

WP_011462674.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:346200-347501:1:exon

RFER_RS01730
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01730
old locus tag: Rfer_0348
so part of: sequence
location: complement(347496..348983)
location: region:347496-348983:-1
so has part: feature:347496-348983:-1:exon
subclass of: SO_0000010

position:347496:-1
position: 347496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348983:-1
position: 348983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347496-348983:-1:exon

RFER_RS01730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01730
old locus tag: Rfer_0348
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009515152.1
GO function: GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PLP-dependent aminotransferase family protein
translation: MLSEYLLTEIARLGLQTKLPLHRQLYEALRRAMLDGKLCAGQRLPSSRELTQDLGLSRNTVVAALNQLAVEGYLVSHIGSGTFVNDSVPKVAPRHRTAHEKQGATLSRRGRALATTFCATQLEIQPFTPGIADFSAFPVALWQRLQNKHWRMTYPDMLDYNFSGGYWPLRRAVADYLRVFRSVPLDVDQVIITSGTQQSMELCAQLLADHSDTVWLEDPAYWGAIKAFMATGLNLHSVPVDQEGIAPQAEDEAVPPRLIYVTPSHQYPTGAVMSLARRHQILSIARRHKAWVLEDDYDSEFRFSGPPISSLAGLDTDQRVLYLGSFSKVLYPGLKLGYLVVPKTLVPPFKQAHYDLNRPGQMPLQAALAEFIEMGYFASALRRARQGYAERRQCLLAALQPCLGPYAHISGAEQGLHLCVRLPPTLDDKALAQRLGELGLTVRALSAYCLRRTDAKGLVIGYGYATLTDIAHYGPLVAKAIAGALACLTPKLESL
SIO_010081: RFER_RS01730
subclass of: SO_0000673
so part of: RFER_RS01730
location: complement(347496..348983)
location: region:347496-348983:-1
so has part: feature:347496-348983:-1:exon

WP_011462675.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:347496-348983:-1:exon

RFER_RS01735
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01735
old locus tag: Rfer_0349
so part of: sequence
location: 349070..349891
location: region:349070-349891:1
so has part: feature:349070-349891:1:exon
subclass of: SO_0000010

position:349070:1
position: 349070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349891:1
position: 349891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349070-349891:1:exon

RFER_RS01735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01735
old locus tag: Rfer_0349
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011117166.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type 1 glutamine amidotransferase
translation: MTKPPSGVRRPTTQSAKRKPVVLMSMGAQERHGHPYQVMTVKYIRPLIEHAGCVPVLAPTCFGTQDIEQYLSMVDGVYLTGAGTNIDPALYGQPNLTPEKAQDKDRDLFDLPTIRMALAMGLPLLGVCRGMQEMNVAFGGDIHQQLYTIPKLKDHREDPAAPVSEQYAASHKVRLVPGTWFAGLMQQDEIAVNSLHGQCIKTLGHGLQALAHAEDGVIEAIHLPEFAQFTLGVQWHPEWMAAQNPHSIRLFEAFGAACRARQCARWSGSEHVL
SIO_010081: RFER_RS01735
subclass of: SO_0000673
so part of: RFER_RS01735
location: 349070..349891
location: region:349070-349891:1
so has part: feature:349070-349891:1:exon

WP_011462676.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:349070-349891:1:exon

RFER_RS01740
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01740
old locus tag: Rfer_0350
so part of: sequence
location: 349914..351281
location: region:349914-351281:1
so has part: feature:349914-351281:1:exon
subclass of: SO_0000010

position:349914:1
position: 349914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351281:1
position: 351281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349914-351281:1:exon

RFER_RS01740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01740
old locus tag: Rfer_0350
EC number: 6.3.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011808619.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
GO process: GO:0006542 - glutamine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamine synthetase family protein
translation: MNDKKTMNFNDLEQWLNERRVTEVECLVPDLTGVARGKILPRAKFTEDRGMRLPQAIVAMGVTGEFPESGPYYDVIDPTDKDMQLRPDPTTVRIVPWATDPTAQVIHDCFDHQGNLVPYAPRTVLRRVCDLFAAQGLQPIVAPELEFYLTARNTDPNTLLRAPVGRSGRSETSRQAYSIDAVNEFDPLFEEIYDFCDKMELNVDTLIHEVGAGQMEINFFHAEPLGLADEVFFFKRTVRESALRHDMYATFMAKPIAGEPGSAMHVHQSLLDVATGKNVFSNEDGTPSETFMHYIGGLQRYIPAAMVLVAPYVNSYRRLSRNSAAPINIEWGYDNRTVGIRSPISSPQARRVENRVIGADANPYVAMAMTLACGYLGIKNKIKPKPEMKGDAYLAPYSLPRSLGEALDWLRRESDLHEVLGKEFITVYSEIKELEFDEFMKVISPWEREHLLLHV
SIO_010081: RFER_RS01740
subclass of: SO_0000673
so part of: RFER_RS01740
location: 349914..351281
location: region:349914-351281:1
so has part: feature:349914-351281:1:exon

WP_011462677.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:349914-351281:1:exon

RFER_RS01745
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01745
old locus tag: Rfer_0351
so part of: sequence
location: 351343..352779
location: region:351343-352779:1
so has part: feature:351343-352779:1:exon
subclass of: SO_0000010

position:351343:1
position: 351343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352779:1
position: 352779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:351343-352779:1:exon

RFER_RS01745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01745
old locus tag: Rfer_0351
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009515149.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aspartate aminotransferase family protein
translation: MNPSTLIPPPAWVRRTEQYDTQALQALDSAHFIHPFTDHGDLATRGARVITRAEGVYIWDSEGEKLLDAMSGLWCVNVGYGRKELADAAYQQMMTLPFYNSFFQTTNVPAVKLAARLASLAPEVDGRSFQHVFYSSSGSESNDSNVRMVRRYWDLLGQPQRKVIISRLNAYHGSTMAGASLGGMSGMHAQGDLPIPKITHIGQPYFFENGLPGESEAEFGLRAAGWLEAKIVEVGADKVAAFIAEPIQGAGGVIIPPATYWPEIQRIVDKYNILLVSDEVICAFGRLGHWFAYEKFGYKPDLVTFAKAVTSGYIPLGGVMVGDRVAKVLIEKGGEFNHGYTYSGHPVACAVGLANLAIMEREQLPQRVRDDIGPYLARGFEKIAEHALVGVAETCGFTAGLVLVKNKKRRERFAEALGVGMMCRGHCFQNGLIMRAVGDRMIIAPPLTMTHDDIDEMLRLIRQALDLTQQELHQKGLI
SIO_010081: RFER_RS01745
subclass of: SO_0000673
so part of: RFER_RS01745
location: 351343..352779
location: region:351343-352779:1
so has part: feature:351343-352779:1:exon

WP_011462678.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:351343-352779:1:exon

RFER_RS01750
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01750
old locus tag: Rfer_0352
so part of: sequence
location: 352873..354039
location: region:352873-354039:1
so has part: feature:352873-354039:1:exon
subclass of: SO_0000010

position:352873:1
position: 352873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:354039:1
position: 354039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352873-354039:1:exon

RFER_RS01750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01750
old locus tag: Rfer_0352
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011802238.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: extracellular solute-binding protein
translation: MKKYLWSFALSALVLAACGKKEEPPAPVAVPATVVSAPAPVAQNSEEKVLNIYNWPDYIPEGMMAAFEKESGIKVNYDTFETNEALHAKLVAGNTGYDIVVPGSVFAKPQIEGGMFQPLDKAKIKNLGNLDSNIMATLAKNTDPGNKYLVPWAWGFTTVGINKTKVAKALGKTPMPENAWDLVFKPEYTSKLKSCGIAYLDSPTEIIPAALHYIGKDAYSNDPADYKLANEMLAKVRKDVRIFSSTMIDDIAGGKACVAIGWSGDINIAANRAKENKSKDVIESLLPSTGALIFFDTMAITKDAKHPNNALAFIDFYLRPENAARMANEMNYPTANKAAMDKIKPEIAGNKTIFVESDYFAKMIAPSSFTNEAREAMATVYNSFKKGK
SIO_010081: RFER_RS01750
subclass of: SO_0000673
so part of: RFER_RS01750
location: 352873..354039
location: region:352873-354039:1
so has part: feature:352873-354039:1:exon

WP_041791248.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:352873-354039:1:exon

RFER_RS01755
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: potA
locus tag: RFER_RS01755
old locus tag: Rfer_0353
so part of: sequence
location: 354137..355237
location: region:354137-355237:1
so has part: feature:354137-355237:1:exon
subclass of: SO_0000010

position:354137:1
position: 354137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:355237:1
position: 355237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354137-355237:1:exon

RFER_RS01755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: potA
locus tag: RFER_RS01755
old locus tag: Rfer_0353
EC number: 7.6.2.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011802237.1
GO component: GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO function: GO:0015417 - ABC-type polyamine transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0015846 - polyamine transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polyamine ABC transporter ATP-binding protein
translation: MADAGSRDNYLVTEKLVKRFDEAVAVDEVDLSIKQGEIFALLGSSGCGKSTLLRMLAGFETPTSGRILLSGQDVARLAPYERPFNMMFQSYALFPHLDIWENIAFGLKREGLPKSDIQQRVGEMLDLVQLTPYAKRKPHQLSGGQQQRVALARSLAKKPKVLLLDEPLGALDKKLREQTQFELVNIIEKVGVTCVMVTHDQEEAMTMAGRIAVMSKGRVLQVGSPEEVYEHPSSRFVADFIGNVNLFDGRLSIDQPDHCAVATSMGEIHVSHGVSGALNMPSAIAVRPEKIEINRERPAADHNVFAGKVKEIAYFGSYNTFIVQTEDGKRVKITEANTSRHELSHITWEDDVFFWWSDGAGVVLRD
SIO_010081: RFER_RS01755
subclass of: SO_0000673
so part of: RFER_RS01755
location: 354137..355237
location: region:354137-355237:1
so has part: feature:354137-355237:1:exon

WP_011462680.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:354137-355237:1:exon

RFER_RS01760
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01760
old locus tag: Rfer_0354
so part of: sequence
location: 355250..356167
location: region:355250-356167:1
so has part: feature:355250-356167:1:exon
subclass of: SO_0000010

position:355250:1
position: 355250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356167:1
position: 356167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355250-356167:1:exon

RFER_RS01760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01760
old locus tag: Rfer_0354
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009515146.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease subunit
translation: MAKLNLTLPGRRFVIGVPAVWLVLFFMLPFLILLYISFVDMGNDISPFKPIWDSETGLLKLKYENYYSIFQSSDGSGLFQTIYIEAYVRSIWYALCTAVLCLVIGYPFSYFIARSAPNLRPALLMMVMLPFWTSFLLRVYAWKGILADQGVLNQMLLALGLITEPMQMLYTDVSMLVGMTYVYLPFMVLPLYANLVKMDIRLLEAAYDLGASPFKAFWLVTVPLSKAGIIAGFMLVFIPCVGEFVIPSLLGGPENIMIGRVVWDEMFTSNNWPRASALAVVMIGLIVVPLAVYYHFTGDAAEVRR
SIO_010081: RFER_RS01760
subclass of: SO_0000673
so part of: RFER_RS01760
location: 355250..356167
location: region:355250-356167:1
so has part: feature:355250-356167:1:exon

WP_011462681.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:355250-356167:1:exon

RFER_RS01765
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01765
old locus tag: Rfer_0355
so part of: sequence
location: 356177..357037
location: region:356177-357037:1
so has part: feature:356177-357037:1:exon
subclass of: SO_0000010

position:356177:1
position: 356177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:357037:1
position: 357037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:356177-357037:1:exon

RFER_RS01765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01765
old locus tag: Rfer_0355
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011802235.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease subunit
translation: MKKLLNRYFGKAWLAVTFLFLYLPLFFMLVFSFNNTRQDAVFTGFSLRWYEALTRDTKIVDGFWLSVQVATAAGVASAVLATFAAFVLVRYRRFAGRTLFSGMVNAPLVMPEVVIGLSLLLLMVGVQNALGWPQRGMLTIVLGHMLLGMAYGTVVVQSRLLEMDRAIEEAAMDLGAKPFQVFFLVTLPNILQAVLAAYLLAFTLSFDDVVIAEFLSGPGVNTLPQVIFGYARRGINPTIYAAATLLIASVTLVVITYSVWVARQTRKREREIAAATRAELLALQAQ
SIO_010081: RFER_RS01765
subclass of: SO_0000673
so part of: RFER_RS01765
location: 356177..357037
location: region:356177-357037:1
so has part: feature:356177-357037:1:exon

WP_011462682.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:356177-357037:1:exon

RFER_RS01770
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01770
old locus tag: Rfer_0356
so part of: sequence
location: 357099..358568
location: region:357099-358568:1
so has part: feature:357099-358568:1:exon
subclass of: SO_0000010

position:357099:1
position: 357099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:358568:1
position: 358568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357099-358568:1:exon

RFER_RS01770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01770
old locus tag: Rfer_0356
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020700901.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aldehyde dehydrogenase
translation: MANHQFDGRALINGQRVDARDGATFDCISPVDGRLLTVVACCGQADVDAAVAAARAAFEDRRWRGMAPAARKRVMIKFADQLLAHADELALMETLDMGKPIQYARAVDVNSAANCIRWYGEAVDKIYDEIAPTASTGLALIQREPVGVVGVIVPWNYPMIMAAWKIAPALAAGNSVVLKPSEKSPLTALRLGDLALQAGIPPGVFNVVTGYGAQAGSPLALHTDVDCIAFTGSTRVGKQIHIMAAQSNLKRAWTELGGKSPNIVFADCPNLDKAVEAAVGSIFFNQGESCNAPSRLFVEAGIKEQFLEKALALVPGFAPGNPLDPATVMGAIVDKTQMDSVLRYIEVGQREGAKLLAGGAQALQETGGCYVQPTIFDGVKNDMTIAREEIFGPVLSVLSFTDAADVVRQANQSVYGLQAAVWTRDINKAHGVARALRAGTVHVNQYDEDDITVPFGGFKQSGVGRDKSLHAFDKYTETKTTWIRIDSPV
SIO_010081: RFER_RS01770
subclass of: SO_0000673
so part of: RFER_RS01770
location: 357099..358568
location: region:357099-358568:1
so has part: feature:357099-358568:1:exon

WP_011462683.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:357099-358568:1:exon

RFER_RS01775
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01775
old locus tag: Rfer_0357
so part of: sequence
location: 358911..359345
location: region:358911-359345:1
so has part: feature:358911-359345:1:exon
subclass of: SO_0000010

position:358911:1
position: 358911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359345:1
position: 359345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358911-359345:1:exon

RFER_RS01775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01775
old locus tag: Rfer_0357
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004201060.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chromate resistance protein
translation: MKWITRSHVHVDRVACPWLISRFIDSTAEFLFVPKNQIDKVAQETGAIPFDAPGVELGHHEGRCSFESIILKYDLKEPGLLRLAKIVHAADVGADIDQDPLARGLEAIASGYSLRFPDDLENLRHQFEVYDALYAWCRLDVAGA
SIO_010081: RFER_RS01775
subclass of: SO_0000673
so part of: RFER_RS01775
location: 358911..359345
location: region:358911-359345:1
so has part: feature:358911-359345:1:exon

WP_011462684.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:358911-359345:1:exon

RFER_RS01780
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01780
old locus tag: Rfer_0358
so part of: sequence
location: 359352..360584
location: region:359352-360584:1
so has part: feature:359352-360584:1:exon
subclass of: SO_0000010

position:359352:1
position: 359352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360584:1
position: 360584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359352-360584:1:exon

RFER_RS01780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01780
old locus tag: Rfer_0358
inference: COORDINATES: protein motif:HMM:NF019310.2
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MDLKILFTTRVVRLFCYGFLSLLLALYLAQVGLTDPQIGLLFSLTLAGDAAVSLWLTTSADRFGRRRTLQIGALLMLGAGLVFILTDNIVLLMAAAIVGVISPSGNEIGPFLPVEQAGLSQIVPSQKRTQVFAWYNLAGSFATAMGALCGGWVVQILQGRGWLALDAYRVVLGAYAAGGLVLTLLFLTLSPAVEVQERAPVGTRLVLGLHRSRAVVLRLSALFALDAFAGGLILQSMIAYWFHIKFGVDTGLLGSLFFGANVLAGISALLAVPLAKRFGLINTMVFTHVPSNLLLILVPLMPNLPLAIGLLLARFSISQMDVPTRQSYTMAVVSADERSAAAGVTGIARSVGASLAPVLTGIFLTNPALFSLPFFLCGGLKLVYDLALYRSFKAVKPPEETLSQSGAKFP
SIO_010081: RFER_RS01780
subclass of: SO_0000673
so part of: RFER_RS01780
location: 359352..360584
location: region:359352-360584:1
so has part: feature:359352-360584:1:exon

WP_011462685.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:359352-360584:1:exon

RFER_RS24800
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS24800
so part of: sequence
location: complement(360642..360770)
location: region:360642-360770:-1
so has part: feature:360642-360770:-1:exon
subclass of: SO_0000010

position:360642:-1
position: 360642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360770:-1
position: 360770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360642-360770:-1:exon

RFER_RS24800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS24800
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLDQMALYFYDPLIFWGVPLVIAVAGVGLRRALNWLRRRRGR
SIO_010081: RFER_RS24800
subclass of: SO_0000673
so part of: RFER_RS24800
location: complement(360642..360770)
location: region:360642-360770:-1
so has part: feature:360642-360770:-1:exon

WP_279587691.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:360642-360770:-1:exon

RFER_RS01785
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01785
old locus tag: Rfer_0359
so part of: sequence
location: complement(360780..361451)
location: region:360780-361451:-1
so has part: feature:360780-361451:-1:exon
subclass of: SO_0000010

position:360780:-1
position: 360780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:361451:-1
position: 361451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360780-361451:-1:exon

RFER_RS01785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01785
old locus tag: Rfer_0359
EC number: 2.1.1.100
EC number: 2.1.1.334
inference: COORDINATES: protein motif:HMM:NF016107.2
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: isoprenylcysteine carboxylmethyltransferase family protein
translation: MTLLFENYGAALVAFVLFAVFHSVGAHEPLKHALARWTSPFWVDHFWRVAYCSLSFGALYGGVSALLWGRNGGNNVWLVDYPDWLWQALTILHLGSIGLLYAAFLQSDYLEFLGLKQAWRGLRVLAGRAVEPTPVALFGSQRLVTTGVYAWVRHPMLAGGLLFLLTSGPSANNLVYTLMYTGYMLLGGYYEERRMVKIFGDDYLSYRIRVGAFCPRFWRRQVT
SIO_010081: RFER_RS01785
subclass of: SO_0000673
so part of: RFER_RS01785
location: complement(360780..361451)
location: region:360780-361451:-1
so has part: feature:360780-361451:-1:exon

WP_011462686.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:360780-361451:-1:exon

RFER_RS01790
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01790
old locus tag: Rfer_0360
so part of: sequence
location: complement(361474..361956)
location: region:361474-361956:-1
so has part: feature:361474-361956:-1:exon
subclass of: SO_0000010

position:361474:-1
position: 361474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:361956:-1
position: 361956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361474-361956:-1:exon

RFER_RS01790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01790
old locus tag: Rfer_0360
inference: COORDINATES: protein motif:HMM:NF024824.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MKNESLWTVVLATVLAPAVMAAGSPSTSSRPAPTRQAAQPSDFELGVKAVQARDFERALPLFEKVTRAEPRNADAWNYLGFSQRQLRHFDQSLAAYQKALALNPNHRGAIEYLGELYLDLGEPDKAREQLAKLQSLCPKGCSEFDDLSKAVGAFQAKPKS
SIO_010081: RFER_RS01790
subclass of: SO_0000673
so part of: RFER_RS01790
location: complement(361474..361956)
location: region:361474-361956:-1
so has part: feature:361474-361956:-1:exon

WP_011462687.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:361474-361956:-1:exon

RFER_RS01795
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01795
old locus tag: Rfer_0361
so part of: sequence
location: complement(362149..363120)
location: region:362149-363120:-1
so has part: feature:362149-363120:-1:exon
subclass of: SO_0000010

position:362149:-1
position: 362149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:363120:-1
position: 363120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362149-363120:-1:exon

RFER_RS01795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01795
old locus tag: Rfer_0361
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020656267.1
GO process: GO:0006629 - lipid metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: patatin-like phospholipase family protein
translation: MTSDRTLRQSGKPWRTLPAAWLGLMLLLGGCGSAPPLAAPTPMPVATPAAKAKPVIGLVLGGGAAKGFAHIGVIKALEAQGIKPDLVIGTSAGSLIGALYAAGKSGFELQALAIPLNEFQVSDWVLPDRGMIKGEALARFVNTAVGNRPLEKLPRKFGVVATDLASGEPVVFRVGDTGTAVRASSSVPGVFQPVSIRGHEYVDGGLSSPVPVRFAREMGATFVIAVDISDKPLNSKLNSTFDILMQSVTIMGQTIARYELPLADVVIRPNIAQLEVLDFTTRHIAVLEGEKAAARVMPALKEKLARFGEPQVTQTSGTAVARP
SIO_010081: RFER_RS01795
subclass of: SO_0000673
so part of: RFER_RS01795
location: complement(362149..363120)
location: region:362149-363120:-1
so has part: feature:362149-363120:-1:exon

WP_011462688.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:362149-363120:-1:exon

RFER_RS01800
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01800
old locus tag: Rfer_0362
so part of: sequence
location: complement(363177..364391)
location: region:363177-364391:-1
so has part: feature:363177-364391:-1:exon
subclass of: SO_0000010

position:363177:-1
position: 363177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:364391:-1
position: 364391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363177-364391:-1:exon

RFER_RS01800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01800
old locus tag: Rfer_0362
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008452552.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 6-phosphofructokinase
translation: MASGKILVAQGGGPTAVINQSLVGVALEARRFSQVAHIYGARHGVRGIVDEEFVDLTQETSHNLELVANTPSSALGSTRDKPDIAYCQEIFRVLQAHQIEHFFYIGGNDSSDTVRIVSQEAQKAGYPLRSIHIPKTIDNDLVGNDHTPGFPSAARFVAQAFAGANLDNAALPGVYVGVVMGRHAGFLTAASALGKKFPDDGPHLIYLPERTFVLEQFLLDVKTTYERYGRCVIAVSEGIHDAQGTPIAALLAKEMEHDAHGNVQLSGNGALADLLCDEIKARLKIKRVRGDTFGYLQRSFIGCVSDVDQREAREVGEKAVQFAMWGGHDGSVAIKRTGFYSVDYELLPLDAVAGKTRVMEDEFIAASGTDVTDAFRMYLRPLLGSGMPDAFRLRHNPVAKVLHR
SIO_010081: RFER_RS01800
subclass of: SO_0000673
so part of: RFER_RS01800
location: complement(363177..364391)
location: region:363177-364391:-1
so has part: feature:363177-364391:-1:exon

WP_011462689.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:363177-364391:-1:exon

RFER_RS01805
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01805
old locus tag: Rfer_0363
so part of: sequence
location: 364629..365120
location: region:364629-365120:1
so has part: feature:364629-365120:1:exon
subclass of: SO_0000010

position:364629:1
position: 364629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365120:1
position: 365120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364629-365120:1:exon

RFER_RS01805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01805
old locus tag: Rfer_0363
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019575363.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hemerythrin domain-containing protein
translation: MSAFPEPFSFVTLDACHQQMQMHLAELAALVRQMETSGVDAKAQHQAGAIEAFFSSTARQHHAEEEKNVFPPLLLSGNADLVAAVHALHQDHGWIEENWIELGPQLRAIALGNNWFDADEFKHGAEVFVALCQEHIALEEALVYPEAKARLAQAMASRSKRAP
SIO_010081: RFER_RS01805
subclass of: SO_0000673
so part of: RFER_RS01805
location: 364629..365120
location: region:364629-365120:1
so has part: feature:364629-365120:1:exon

WP_011462690.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:364629-365120:1:exon

RFER_RS01810
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01810
old locus tag: Rfer_0364
so part of: sequence
location: complement(365140..366093)
location: region:365140-366093:-1
so has part: feature:365140-366093:-1:exon
subclass of: SO_0000010

position:365140:-1
position: 365140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366093:-1
position: 366093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365140-366093:-1:exon

RFER_RS01810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01810
old locus tag: Rfer_0364
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006156537.1
GO function: GO:0000156 - phosphorelay response regulator activity [Evidence IEA]
GO process: GO:0006935 - chemotaxis [Evidence IEA]; GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chemotaxis protein
translation: MNQAMRDIDERTNLTGNSMFELLLFRLGQAPGSQRRELFGINVFKVREIMVMPEITVMVNAPPAVMGVANIRGQMIPVINLPAVTGCNPTQGLGILLVTEFARTTQAFAVEEVNEIVRLEWKHVLSAEGNGGGLVTSIARLDGNAENTRLAQVLDVEQILRDVFPPPPQALNDDAMLPKLQLPPGTVILAADDSAVARMMIEQGLTAMEVPYIMAKTGQEAWDRLQALSVQAATEGKTAQDKVALVLTDLEMPEMDGFTLTRNIKQDVRFRSIPVVIHSSLTGSANEGHVKSVGADAYVAKFVAEELAATIRQVLTR
SIO_010081: RFER_RS01810
subclass of: SO_0000673
so part of: RFER_RS01810
location: complement(365140..366093)
location: region:365140-366093:-1
so has part: feature:365140-366093:-1:exon

WP_011462691.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:365140-366093:-1:exon

RFER_RS01815
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01815
old locus tag: Rfer_0365
so part of: sequence
location: complement(366160..367377)
location: region:366160-367377:-1
so has part: feature:366160-367377:-1:exon
subclass of: SO_0000010

position:366160:-1
position: 366160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367377:-1
position: 367377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366160-367377:-1:exon

RFER_RS01815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01815
old locus tag: Rfer_0365
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013723236.1
GO function: GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MltA domain-containing protein
translation: MVHQTISSSSSKAPSASSKSKLMNRLRSTVLNTWIVGMLVACSSVPIPPQQPAAPTEMAAPPVGARPDDAGPLPEPIVRAKSRWTAVRWAELPGFEDDTLFEAWNAWIKSCERPGPVFAPLCSEVRRLSIGDEPQRRAWLQARLQPYRIDTLAGDAEGLLTAYFEPVLDATRSASADFSVPLYQPPPGLAQNLPWYTREQIDTSARAQAALKGREIVFLSDPIDALVLQIQGSGRVRIRQPDGSQTLARLAYAGSNGQPYKSVGRWLLDQGAVRDASWPAIKAWLAQNPGRVNELLWSNPRTVFFREEAMSELDAAWGPKGAQGVPLTPGRSIAVDPGSIPYGTPVWLASHGPGLNLQKLVLAQDTGSAIVGGVRADYFAGWGPVAAELAGRLKQPLRLWVLWPK
SIO_010081: RFER_RS01815
subclass of: SO_0000673
so part of: RFER_RS01815
location: complement(366160..367377)
location: region:366160-367377:-1
so has part: feature:366160-367377:-1:exon

WP_041790022.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:366160-367377:-1:exon

RFER_RS23865
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS23865
so part of: sequence
location: 367310..367474
location: region:367310-367474:1
so has part: feature:367310-367474:1:exon
subclass of: SO_0000010

position:367310:1
position: 367310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367474:1
position: 367474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367310-367474:1:exon

RFER_RS23865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS23865
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020228228.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSLLLLEALGALLLLLLIVWWTMFSGRRRGELPAAPTTPDDAAAPKSTSSVEKT
SIO_010081: RFER_RS23865
subclass of: SO_0000673
so part of: RFER_RS23865
location: 367310..367474
location: region:367310-367474:1
so has part: feature:367310-367474:1:exon

WP_166485611.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:367310-367474:1:exon

RFER_RS01820
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01820
old locus tag: Rfer_0366
so part of: sequence
location: complement(367514..371659)
location: region:367514-371659:-1
so has part: feature:367514-371659:-1:exon
subclass of: SO_0000010

position:367514:-1
position: 367514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:371659:-1
position: 371659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367514-371659:-1:exon

RFER_RS01820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01820
old locus tag: Rfer_0366
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007870120.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YhdP family protein
translation: MIDLTPVPSSLLKTWTIVARWSLGLVLAAWFVFGLTWGALHWLIVPRIGEFRPQLEAYAARALGVPVRIGAITAQSSGMIPSFELTDVELFDEQGREALRLPRVLAALSPRSVWRLGFEQLYVERPQLSIRRALDGKIRVAGLDFSQTSDTGSSAVDWFFSQLEFVIRDGSILWTDELRAAPTLALQQVDLVVRNAGRRHNLRFDATPPPLWGERFSVRGLMTQPLLSRHRGHWRDWQGQLYAAFARVDLSELQRYADVGVDLRQGKGALRAWVDVSRGQVTGGTADVALSEVNVTLGAQLQALELLSVSGRLSGRLPANGFQLSTQALAFDTRDGLRWPGGNVSVDYTAAEGRVAARGELKADKLDLQALSQIADRLPIDPVTRAALLTYAPKGLVERIQASWQGPMGAFSQYAAKGLVNQLELAANTLNMAPGQGLPPQDSPGVRGASIDFDFNQSSGKASISLSNGAVVVPGIFDEPVIPVTQLSTEAKWQVKGDHIAVQLPNLKFSNADAQGEAQIKWETSDPAKSSGHSRFPGVLDLQATLSRADGTRVHRYLPSLIGRPVRDYVRDAVTAGTASGVKARVKGDLNNMPFRDPKQGEFRVSADVKNATLVYVPRSIQAAQALPWPALTQLSGELVFDRAQLQVRGAHARMGAASNLQVSKVDALIAELSNATVTVTAEVQGALAEALGIVKGSPLGSMIGNALDRAVASGSADYKLKLSLPIAALEKSTVLGSVTLRNNDFQITPETPKLTGARGVVNFSDSGFSIVGGQARLLGGEARLEGGSVAPAGATASRAATSVLIRASGTVSAEGLRQAQELGFAARMAQHASGSTAYTAVLGFRGGAPELTVSSNLQGLSLSLPAPLNKSAQALLPFRLETALLAQALPPGRGAAPPMRDQLTLNLGPLASISYIRDLSGPEPRVTRGSIGVGLSPQESATLPDEGVVANINLSTVDLDAWGALLERAAGSSLTDAALATATPQATPGAAGAASAALSYLPTSMAVRAQTLTFGGRTLHNVVVGGSREGMLWRANLAATELNGYLEYRQPSDLGEGRLYARLARLTIAPSTARDMEALLEEQPAGIPALDIVVEDFELRGKRLGRVEVEAINRGSSAVAPGNLAREWRLNKFNIIAPEAVLTATGNWAALGALTPPKANARRRTVMNFKLAVADGGELLTRFGMPGVVRKGRGQMEGQVAWMGSPISLDYPSMTGAFTVNMESGQFLKADPGMAKLLGVLSLQALPRRLTLDFRDVFSEGFSFDFVRGDVTIEQGIAKTNNLQMKGVNAAVLMEGRADIEKETQDLKVIVVPEINAGTASLIATVINPAIGIGTFLAQMFLRKPLTEAATQEFHIDGSWADPQINRVQRKTGGANVAPR
SIO_010081: RFER_RS01820
subclass of: SO_0000673
so part of: RFER_RS01820
location: complement(367514..371659)
location: region:367514-371659:-1
so has part: feature:367514-371659:-1:exon

WP_011462693.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:367514-371659:-1:exon

RFER_RS01825
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: glnE
locus tag: RFER_RS01825
old locus tag: Rfer_0367
so part of: sequence
location: 371687..374404
location: region:371687-374404:1
so has part: feature:371687-374404:1:exon
subclass of: SO_0000010

position:371687:1
position: 371687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374404:1
position: 374404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371687-374404:1:exon

RFER_RS01825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: glnE
locus tag: RFER_RS01825
old locus tag: Rfer_0367
EC number: 2.7.7.42
EC number: 2.7.7.89
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015016253.1
GO function: GO:0008882 - [glutamate-ammonia-ligase] adenylyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase
translation: MTGPALSAHSRFGQRIRRRFESQLHLLPPGLPSPASMAQACDALRALGLDSASALRTTRQLVLERLLCLDCDQQAPLQQVTQAMTDLAEFALNTACAEVELTLDQTHGAPTTAAGARAQLWIVGMGKLGARELNVSSDIDLIYVYDEDGDTAGDSQGRGRISNQEYFAKAVRAIYALVGDTTEHGFVFRVDLALRPNGNSGPPAVSLDALEQYLHVQGREWERFAWLKSRVVAPLGCVADGSTLALRNVVMPFVFRRYLDYSVFDALRVLHRQIREHASKRSAGHPERANDVKLSRGGIREIEFIVQLLQVVRGGQFPELRTRATLRALPRLVKAGLMPKNTAQALADAYVFLRQVEHRIQYLDDQQTHVLPTQDQDLTWIASTLGFATACQLLHQLDAHREVVAEEFDKLLGGGADQSCKGCNGGNGAKSAAAPGFDEVLEQLADQFRQRVANWREHPRVLALKEESRTRLLRLIARTAQWVREGRATEAAAVRLVDWMEPLLRRESYLALLLERPNVHERLLRLLDAARWPARYLLLHPGVIDELASADFLDERFSASDFEHELDHRRAALAGTGEDDDETLLNLLRRAHHAEVFRTLARDVEGKLTVEAVADDLSSLAEAVLRVTTRWCWSRLKNRHRETPQFAIIAYGKLGGKELGYGSDLDLVFVFDDDDERAPEVYASLVRKLINWLTVKTGEGDLYEIDTALRPNGNAGLLITSFDAYANYQQQRGSNTAWTWEHQAMTRARFVLGDDTLRQRFDVIRKSVISAPRQAEGLKTEIKAMRERLRDAHAGKEGYFDVKYSPGGMIDAEFVMQYLVLSQSAQLPELLDNLGNIALLERAEVMGLLPVGVGHAAASAYRTLRQVQHRARLNDEPYQVRLPQLQAERDAVLALWHAVFGAALP
SIO_010081: RFER_RS01825
subclass of: SO_0000673
so part of: RFER_RS01825
location: 371687..374404
location: region:371687-374404:1
so has part: feature:371687-374404:1:exon

WP_244095782.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:371687-374404:1:exon

RFER_RS01830
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01830
old locus tag: Rfer_0368
so part of: sequence
location: 374558..376585
location: region:374558-376585:1
so has part: feature:374558-376585:1:exon
subclass of: SO_0000010

position:374558:1
position: 374558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376585:1
position: 376585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374558-376585:1:exon

RFER_RS01830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01830
old locus tag: Rfer_0368
EC number: 1.17.4.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008811800.1
GO function: GO:0008998 - ribonucleoside-triphosphate reductase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonucleoside triphosphate reductase
translation: MSATKPPVFSHIIKRDGGIKPFDGAKIAHALARAAQVSGEFDDTEAQRLTHYLVLPKIKVHGQVTPHIEQIQDAVESALFDAGYPKTLRAYIVYREQHHKLRSDRKTLVDVESSMNEYLQQLDWRVNANANQGYSLGGLILNVSGKVIANYWLNHVYPPEVGAAHRSAAIHIHDLDMLAGYCAGWSLRTLLHEGLNGVPGKVESGPPKHLSSAVGQIVNFLGTLQNEWAGAQAFSSFDTYMAPYVRQDKLSYDEVRQSLQELIYNLNVPSRWGTQTPFTNLTFDWVCPQDLREQIPVIAGKEMAFSYGELQPEMDMINRAYIEIMMAGDAKGRVFTFPIPTYNITEDFDWYSTNAELLFEMTAKYGLPYFQNFINSELKPNMIRSMCCRLQLDLRELLKRGNGLFGSAEQTGSLGVVTINCARLGYLHRGDEAAMLAALDALLELGRDSLEIKRKVIQRHMDNGLFPYTKRYLGTLRNHFSTLGVNGINEMIRNFTQDKYDISGEWGHAFAVRLLDHVRARMLEFQDQTGHMYNLEATPAEGTTYRFAKEDAKQFPDILQAGTKDMPYYTNSSQLPVGFTDDPFEALELQDDLQRKYTGGTVLHLYMTEPLSSAEACRQLVKRSLSRFHLPYITVTPTFSICPKHGYLGGRHDFCPKCDADLISRKQLETNTQGD
SIO_010081: RFER_RS01830
subclass of: SO_0000673
so part of: RFER_RS01830
location: 374558..376585
location: region:374558-376585:1
so has part: feature:374558-376585:1:exon

WP_011462695.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:374558-376585:1:exon

RFER_RS24805
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: nrdD
locus tag: RFER_RS24805
old locus tag: Rfer_0369
so part of: sequence
location: 376587..376790
location: region:376587-376790:1
so has part: feature:376587-376790:1:exon
subclass of: SO_0000010

position:376587:1
position: 376587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376790:1
position: 376790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376587-376790:1:exon

RFER_RS24805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: nrdD
locus tag: RFER_RS24805
old locus tag: Rfer_0369
EC number: 1.1.98.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008645279.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0008998 - ribonucleoside-triphosphate reductase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: anaerobic ribonucleoside-triphosphate reductase
translation: MTDLSEQQLLTPQAVVLRDDERQRCEVWTRVMGYHRPMSSFNTGKKGEFHERTYFDERCCSPSQPDA
SIO_010081: RFER_RS24805
subclass of: SO_0000673
so part of: RFER_RS24805
location: 376587..376790
location: region:376587-376790:1
so has part: feature:376587-376790:1:exon

WP_011462696.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:376587-376790:1:exon

RFER_RS01840
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01840
old locus tag: Rfer_0370
so part of: sequence
location: 376735..377520
location: region:376735-377520:1
so has part: feature:376735-377520:1:exon
subclass of: SO_0000010

position:376735:1
position: 376735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377520:1
position: 377520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376735-377520:1:exon

RFER_RS01840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01840
old locus tag: Rfer_0370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009458519.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
GO process: GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]; GO:0051353 - positive regulation of oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: anaerobic ribonucleoside-triphosphate reductase activating protein
translation: MSALTLTSAAAARVSPTPDRVDALAAGAPALTLKVGGITPFSATDYPGKLAAVVFVQGCPWRCGYCHNPHLQPRTGSSLVSWSAVLALLKRRVGLIDAVVFSGGEPTMDPGLLDAMRAVRSLGFGVGLHSAGMYPRRLAEVLELVDWVGLDVKSSWPGYDAITGIADSARQARASAQLVLASGIAHEFRTTVHPALHTEADILALAKTLQAMGVRHYVLQVFRATGCGDARLNAGSTLGYPGAELLAQVAALFDSFTLRQV
SIO_010081: RFER_RS01840
subclass of: SO_0000673
so part of: RFER_RS01840
location: 376735..377520
location: region:376735-377520:1
so has part: feature:376735-377520:1:exon

WP_084795417.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:376735-377520:1:exon

RFER_RS01845
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01845
old locus tag: Rfer_0371
so part of: sequence
location: 377624..378751
location: region:377624-378751:1
so has part: feature:377624-378751:1:exon
subclass of: SO_0000010

position:377624:1
position: 377624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:378751:1
position: 378751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377624-378751:1:exon

RFER_RS01845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01845
old locus tag: Rfer_0371
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011801552.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0015658 - branched-chain amino acid transmembrane transporter activity [Evidence IEA]; GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0015803 - branched-chain amino acid transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: branched-chain amino acid ABC transporter substrate-binding protein
translation: MSLRLTAAAALGLTTAVAFAQDVQIVRIAHAGPTSGGIAHIGKDTENGVRLAIDELNAQALVIGGKKIKFELAAEDDAGDPRQATTVAQKLCDSHVAGVVGHLQSGTTIPASMVYNKCGLPHITAAATNPDVTKHGYPTTFRLIANDNALGAALAYFAHDALKLKTVAVIDDRTAYGQGLADVFKATAQQKGMRIVAEEFTNDKATDFMAILTAIKSKKPDAIFYGGLDAQAGPMLRQMEQLGMSNVRYFGGDALCTEKLPELSSKAGTLKNVTCATGGASVQKMQGGAAWKKKYDARFPGQFQIYSPYAYDATFVLADAMKRANSVDPKVYVPFIGKTHYKGVTANIAFTSKGELTQPSVTLYTYKDDVRAALN
SIO_010081: RFER_RS01845
subclass of: SO_0000673
so part of: RFER_RS01845
location: 377624..378751
location: region:377624-378751:1
so has part: feature:377624-378751:1:exon

WP_244095908.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:377624-378751:1:exon

RFER_RS01850
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01850
old locus tag: Rfer_R0002
so part of: sequence
location: complement(378824..378899)
location: region:378824-378899:-1
so has part: feature:378824-378899:-1:exon
subclass of: SO_0000663

position:378824:-1
position: 378824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:378899:-1
position: 378899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378824-378899:-1:exon

RFER_RS01850
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 338969
locus tag: RFER_RS01850
old locus tag: Rfer_R0002
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(378864..378866),aa:Ala,seq:cgc)
SIO_010081: RFER_RS01850
subclass of: SO_0000673
so part of: RFER_RS01850
location: complement(378824..378899)
location: region:378824-378899:-1
so has part: feature:378824-378899:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:378824-378899:-1:exon

RFER_RS01855
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01855
old locus tag: Rfer_0372
so part of: sequence
location: complement(378967..380472)
location: region:378967-380472:-1
so has part: feature:378967-380472:-1:exon
subclass of: SO_0000010

position:378967:-1
position: 378967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380472:-1
position: 380472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378967-380472:-1:exon

RFER_RS01855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01855
old locus tag: Rfer_0372
EC number: 1.2.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012366001.1
GO function: GO:0102662 - malonate-semialdehyde dehydrogenase (acetylating, NAD+) activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CoA-acylating methylmalonate-semialdehyde dehydrogenase
translation: MNELPLIQHLIDGQLVAGGTRSVDVFNPATGQAEKRVLLADKHTVEQAIASAHAAYPAWRATPPLKRARVMSKLKTLLEDNAERLCALLTAEHGKVLSDSMGELQRGIENVEYASYAPELLKGEHSKNVGPSMDSWSEFQPLGVTAGITPFNFPVMVPLWMWPMAIACGNTFVLKPSERDPSSALLVAELALQAGLPPGVLNVVNGDKEAVDALLTDKRVQAISFVGSTPIAEYIYATGCAHGKRVQALGGAKNHAVVMPDADIANAVNALMGAAYGSCGERCMAIPLVVAVGDATADAVLAGLKAEIAKMKVGPGTDSANDMGPLVTKAHLDKVKGFVDQGVQEGATLVVDGRNVQVAGHESGYFMGACLFDHVKPGMKIYQEEIFGPVLGVVRVKTLQEGMDLINAHEYGNGTCIFTRDGEAARYFSDHILVGMVGVNVPLPVPVAYHSFGGWKRSLFGDLSAYGPDAVRFYTKRKTITQRWPSAGVREGAVFSFPTNR
SIO_010081: RFER_RS01855
subclass of: SO_0000673
so part of: RFER_RS01855
location: complement(378967..380472)
location: region:378967-380472:-1
so has part: feature:378967-380472:-1:exon

WP_011462699.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:378967-380472:-1:exon

RFER_RS01860
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01860
old locus tag: Rfer_0373
so part of: sequence
location: complement(380484..381833)
location: region:380484-381833:-1
so has part: feature:380484-381833:-1:exon
subclass of: SO_0000010

position:380484:-1
position: 380484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381833:-1
position: 381833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380484-381833:-1:exon

RFER_RS01860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01860
old locus tag: Rfer_0373
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011485167.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aspartate aminotransferase family protein
translation: MKMNDVQTLATPRLDAAWLDAHWMPFSGNREFKANPRMMASAKGCYYTDSHGKQIFDGLSGLWCCGLGHGRNEITEAVTQQMATMDYSPAFQFGHPLSFALANKLKELTPAGLDYVFFTGSGSESADTSLKMARAYWRAKGQATKTRLIGREKGYHGVNFGGVSVGGIGGVRKMFGQGIEADHLPHTQLAGNAFSRGMPDKGAELADDLLNLIALHDASNIAAVIVEPFSGSAGVIIPPKGYLQRLREICTANNILLIFDEVITGFGRAGAYTGAEAFGVTPDIMNLAKQISNGAQPIGAVLAKKEIYDTFMAAGGPDYMLEFAHGYTYSAHPVTCAAALATLDILVKENMIDRVKALAPHFENAVHSLKGVRHITDIRNYGLAAGFTIDALPGEPAKRPFEIAMAMLKKGFYVRYGGDTIQLAPPFISTPAQIDSLVNALGETINQTA
SIO_010081: RFER_RS01860
subclass of: SO_0000673
so part of: RFER_RS01860
location: complement(380484..381833)
location: region:380484-381833:-1
so has part: feature:380484-381833:-1:exon

WP_011462700.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:380484-381833:-1:exon

RFER_RS01865
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01865
old locus tag: Rfer_0374
so part of: sequence
location: 381979..382932
location: region:381979-382932:1
so has part: feature:381979-382932:1:exon
subclass of: SO_0000010

position:381979:1
position: 381979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:382932:1
position: 382932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381979-382932:1:exon

RFER_RS01865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01865
old locus tag: Rfer_0374
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015914663.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MQVKSRAALGQLSDMDIRLLRVFKSVAECGGMAAAELDLNIGVSTVSRHIKDLETRLGLTLCRRGRAGFALTAEGEQIYAETLRLLAGVDAFRSRVDEIHQRMGGELHIAVFDKTASNPAAHISSAIARFAEQAPDVSLHLHVAPLNTIERGVLDGQFQVGVIPGHRSSDTLTYDELFTETMFLYCGAQHALFPDGQAVQEPADWDALRKHAFAGLGYHSPNMEISQRVHLVRKATGYDQESIATLILSGNYLGFLPDHYADGFVRNGQMRAVKPALFRYSCSFFSIVRASPQPSRVSRAFRDCLLAAHRGVSAGAG
SIO_010081: RFER_RS01865
subclass of: SO_0000673
so part of: RFER_RS01865
location: 381979..382932
location: region:381979-382932:1
so has part: feature:381979-382932:1:exon

WP_011462701.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:381979-382932:1:exon

RFER_RS01870
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01870
old locus tag: Rfer_0375
so part of: sequence
location: complement(382956..383330)
location: region:382956-383330:-1
so has part: feature:382956-383330:-1:exon
subclass of: SO_0000010

position:382956:-1
position: 382956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383330:-1
position: 383330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:382956-383330:-1:exon

RFER_RS01870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01870
old locus tag: Rfer_0375
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013520710.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTLQYQLKGGNYHLYDLSSPASKVTGEHRLRLSTDTVAIAFDASTGALHEHGNPARIHSWATTARRRLRAAGSLDSANDIVVVSGPLPVDEINKCLRVEGYCRRMFTRLATLPHGKLLGRQAAY
SIO_010081: RFER_RS01870
subclass of: SO_0000673
so part of: RFER_RS01870
location: complement(382956..383330)
location: region:382956-383330:-1
so has part: feature:382956-383330:-1:exon

WP_011462702.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:382956-383330:-1:exon

RFER_RS01875
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01875
old locus tag: Rfer_0376
so part of: sequence
location: complement(383437..384039)
location: region:383437-384039:-1
so has part: feature:383437-384039:-1:exon
subclass of: SO_0000010

position:383437:-1
position: 383437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384039:-1
position: 384039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383437-384039:-1:exon

RFER_RS01875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01875
old locus tag: Rfer_0376
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012348761.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNEKIRQLLDQMSTLEDDLRREVQAQEASALYQIKGKRVEFEAAIRQAHRQLKTSFFRWLVTNRPQNLITGPIIYSMIVPIVMLDLCVSFYQATCFPIYGITKVRRSDYIVFDRQQLGYLNFIEKFHCTYCAYGNGLIAYVSEIIGRTEEYFCPIKHARKMLGAHSRYARFLAYGEAQDYEAKLEQFRVRLGDKQPPERT
SIO_010081: RFER_RS01875
subclass of: SO_0000673
so part of: RFER_RS01875
location: complement(383437..384039)
location: region:383437-384039:-1
so has part: feature:383437-384039:-1:exon

WP_011462703.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:383437-384039:-1:exon

RFER_RS01880
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01880
old locus tag: Rfer_0377
so part of: sequence
location: 384176..385441
location: region:384176-385441:1
so has part: feature:384176-385441:1:exon
subclass of: SO_0000010

position:384176:1
position: 384176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385441:1
position: 385441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:384176-385441:1:exon

RFER_RS01880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01880
old locus tag: Rfer_0377
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012348356.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: anion transporter
translation: MMLGHGAPDWGVVAIFVTVYLGMILGGLPRLKLDRSGVALLGAIGVIGLEVMTTGQAAQAVDWPTIVLLFSFMVLSAQMRLGGFYTTVTHRVAALPLGRGGLLAALIAVAAALSAVFSNDIVCLAMTPVVARLCLQRRLDPVPFLLGLACAANIGSAATLIGNPQNMLIGSVLQLPFGAYVRQALPPVLMSLAVLWVWLVWGPQARVASLPRLKLPPDLAAELRAGEPFDAWQSIKGLVVAAALLLVFLFTDWPREVAALVGAGVLLLSRRFHSSRVMGLVDWDVLVLFMGLFVVNHAFESTGLAAQAVTWLGAQGVHLADPGPLVVAGVGLSNLLSNVPAVMLLLPHLKGVEAGVTLALVSTLAGNLLLVGSIANLIVVDLAQRSGVIIDWRAHARVGIPVTLMTLAIVWLWLSGMLTVG
SIO_010081: RFER_RS01880
subclass of: SO_0000673
so part of: RFER_RS01880
location: 384176..385441
location: region:384176-385441:1
so has part: feature:384176-385441:1:exon

WP_011462704.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:384176-385441:1:exon

RFER_RS01885
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01885
old locus tag: Rfer_0378
so part of: sequence
location: complement(385562..386215)
location: region:385562-386215:-1
so has part: feature:385562-386215:-1:exon
subclass of: SO_0000010

position:385562:-1
position: 385562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:386215:-1
position: 386215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:385562-386215:-1:exon

RFER_RS01885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01885
old locus tag: Rfer_0378
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011482538.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKLLLLSAAMVSSGLSLAQEVGHVISATPVMQQVGIPRQVCSTEQVAVQPAKSGAGAVMGAIAGGAMGNAVGGGGGKAAATMLGIVGGAVLGDRIEGAPAAEIQNVQRCAMQTFFENRPVAYNVVYEFGGKQYSVQMPNDPGPTIELQITPVGAGTPWQEPANATSYVQPSYGPPANVVLMPPAYPGYYARPYYPPVGIEFDFGYRGGYGGRRHWR
SIO_010081: RFER_RS01885
subclass of: SO_0000673
so part of: RFER_RS01885
location: complement(385562..386215)
location: region:385562-386215:-1
so has part: feature:385562-386215:-1:exon

WP_011462705.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:385562-386215:-1:exon

RFER_RS01890
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01890
old locus tag: Rfer_0379
so part of: sequence
location: complement(386337..389411)
location: region:386337-389411:-1
so has part: feature:386337-389411:-1:exon
subclass of: SO_0000010

position:386337:-1
position: 386337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:389411:-1
position: 389411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:386337-389411:-1:exon

RFER_RS01890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01890
old locus tag: Rfer_0379
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008444353.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: efflux RND transporter permease subunit
translation: MNFSELFIRRPVMTVLLNLAIVLAGVIGFRSIPVAALPSYDTPVINVFAALPGANPETMASSVALPLEKQFQTVPGLKTISSTSTLGRTSLTLEFDEGRNVDAAAVDVQAALLRAQRSLPQDMTATPSYRKVNPADAPVLLISMTSPSLAPSDLQDFAEHLISPTLSTIDGVAQVNVFGSKRYAVRVSVHPEALAVRNIGLDELSTALRAANVNTPVGTLDGPRQTLMLQANRQLQNAADFADLIVSNRGGNPVRLKEVAQVEDSLETLKSWATFNGENSITLAVQRQPGANTVRVVDAIRQALPNLQSQMPQSVKLVPFLDRSVSVREALHDVSLTLLGTIALVVLVIFLFLRRFVATMIPMLSLPVSLVGAVALLWGFSYSLDNISLLGLTLAVGLVVDDAIVVLENIMRHVENGEAPFPAALKGAREVGFTIISISTSLIAVFIPIFFMPGVIGLLFHEFAVVVGLAIIVSAFVSLTLVPMLASRFLTGEAHKKPPGAVVRSFARGFDRLLAGYTRLLDIALGHRTLVLLLALATLVGTVWLANIIPKGFFPEEDIGQIQVSTEASEDTSFPEMVRLQEQAAAIIRLDPNVAAVSSFNGGSGAQNTGRMFIALKPSNQRQTMKKVVEGLRRKLRELAGISVFMRPVQNLQLGGRPSKAQYQYVLQSVRADELNSWASKLQDSLSADPLFRDVTSDAQLRGLQAQLKIDRDSANKLGVSIDGIRTALYSAFGERQVSTIYLPTDSYQVIMEVQADAKEDERALGGIYVRSNTGALVPISNFTTVERTLGPTAINHVGQLQAVTVSFNLAPGAALGAATAKIDAARAAIQMPSSIITSYGGDAAVFKSSQGSQLVLIIAALLVIYVLLGVLYESYIHPITIIAGLPSAAVGALVTLMLFGQDLTLIATIGIVMLVGIVKKNAIMMIDFALDAQRHQGMAAAQAIREACILRFRPIMMTTMAALMGALPIALGLGAGAELRQPLGLAVVGGLVFSQAITLFITPVIYLALDRFSGTGPVLTAES
SIO_010081: RFER_RS01890
subclass of: SO_0000673
so part of: RFER_RS01890
location: complement(386337..389411)
location: region:386337-389411:-1
so has part: feature:386337-389411:-1:exon

WP_011462706.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:386337-389411:-1:exon

RFER_RS01895
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01895
old locus tag: Rfer_0380
so part of: sequence
location: complement(389408..390610)
location: region:389408-390610:-1
so has part: feature:389408-390610:-1:exon
subclass of: SO_0000010

position:389408:-1
position: 389408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:390610:-1
position: 390610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:389408-390610:-1:exon

RFER_RS01895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01895
old locus tag: Rfer_0380
inference: COORDINATES: protein motif:HMM:TIGR01730.1
GO function: GO:0005215 - transporter activity [Evidence IEA]
GO process: GO:0006810 - transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: efflux RND transporter periplasmic adaptor subunit
translation: MNARHFFLTLTGGLLALGLGGCTAKTDAPAPAASSSAPAKPSAAALPAVTITTVRAQQRDLPVLYSATGTVMALASVDIKSQVTSVVSKIHIQDGQFVKAGELLFTLDSRTDEANLAKARAQLAKDSALRADAQRQLARAQQLYSQNFISQGAVDTAQAQLDSMAASVVADQAAIEAARVAVSYARISAPNAGRAGAVNVSQGSVVQANLTSLVTITQLDPIAVGFNLPQRTLADTLSALKNGGAAVKATIADGGASFIGHLNFVDNAIDSSSGSVKVKAVFANPQGKLWPGAFVDISQTVNTLKDAIVIPQATIIPNARGTMVYVVEAGKAVLRPVRVVLAQGDDAAVTGVKAGESIVLDGKQNLRPNSPVLEQARAPAGGASGPAGGAAASQQRPTAS
SIO_010081: RFER_RS01895
subclass of: SO_0000673
so part of: RFER_RS01895
location: complement(389408..390610)
location: region:389408-390610:-1
so has part: feature:389408-390610:-1:exon

WP_011462707.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:389408-390610:-1:exon

RFER_RS01900
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01900
old locus tag: Rfer_0381
so part of: sequence
location: 390864..391364
location: region:390864-391364:1
so has part: feature:390864-391364:1:exon
subclass of: SO_0000010

position:390864:1
position: 390864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391364:1
position: 391364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:390864-391364:1:exon

RFER_RS01900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01900
old locus tag: Rfer_0381
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKITRIFAALPVLLLALVACTTTGSGGGQLAGPGAQEEPVAFSWTSTDGGMSGAMTAALPNASYQGRFFQITQQTRGEVLTPLWTHWNRGWYDWPYWSGPEFQPYPATQFITFYSGKVVATLESPGNQRMRCRFHLVEPVRGMSGGGEGQCQLSDGRLVRATFPGK
SIO_010081: RFER_RS01900
subclass of: SO_0000673
so part of: RFER_RS01900
location: 390864..391364
location: region:390864-391364:1
so has part: feature:390864-391364:1:exon

WP_011462708.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:390864-391364:1:exon

RFER_RS01905
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01905
old locus tag: Rfer_0382
so part of: sequence
location: 391417..392076
location: region:391417-392076:1
so has part: feature:391417-392076:1:exon
subclass of: SO_0000010

position:391417:1
position: 391417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:392076:1
position: 392076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391417-392076:1:exon

RFER_RS01905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01905
old locus tag: Rfer_0382
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020703466.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitroreductase family protein
translation: MNTLTKMALGLIGQLKPQPADGDAASTTYLPAANTTGGLPLMQALAQRQSQREFDPAPLPLQMLSDLLWAAAGINRSELAGRTAPSAMNAQEVDVYVALPEGLYRYAAPTQTLHLVRATDVRRVTGYQDFVDTAPLDLVLVADHARMKLVPAAQREAFAFAAAGAMAQNVYLYCASAGLATVIRAWLDRDALAQAMGLNNDQQVLLSQTVGRPKTVATA
SIO_010081: RFER_RS01905
subclass of: SO_0000673
so part of: RFER_RS01905
location: 391417..392076
location: region:391417-392076:1
so has part: feature:391417-392076:1:exon

WP_011462709.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391417-392076:1:exon

RFER_RS01910
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01910
old locus tag: Rfer_0383
so part of: sequence
location: complement(392077..392457)
location: region:392077-392457:-1
so has part: feature:392077-392457:-1:exon
subclass of: SO_0000010

position:392077:-1
position: 392077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:392457:-1
position: 392457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392077-392457:-1:exon

RFER_RS01910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01910
old locus tag: Rfer_0383
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015912911.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VOC family protein
translation: MKPTYFDLTVRDLARARVFFEKVLGWRFERFPMPYEYYRIQAGPEGEPGIDGGIGRIKDTPLSGGNPLTQVTVPVPNLDVVTSLVQANGGRIVEAKMPIPGVGWYATCAEPGGLFFGLIQADENAK
SIO_010081: RFER_RS01910
subclass of: SO_0000673
so part of: RFER_RS01910
location: complement(392077..392457)
location: region:392077-392457:-1
so has part: feature:392077-392457:-1:exon

WP_011462710.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:392077-392457:-1:exon

RFER_RS01915
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01915
old locus tag: Rfer_0384
so part of: sequence
location: complement(392468..392719)
location: region:392468-392719:-1
so has part: feature:392468-392719:-1:exon
subclass of: SO_0000010

position:392468:-1
position: 392468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:392719:-1
position: 392719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392468-392719:-1:exon

RFER_RS01915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01915
old locus tag: Rfer_0384
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011481724.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphopantetheine-binding protein
translation: MSTDRAALMATVLTLLRAIAPEVEPGTLTPERPLRQQVDLDSMDWLNFLLSLHERFGVSIPESDYAGLVCLNDVVNYLQARLK
SIO_010081: RFER_RS01915
subclass of: SO_0000673
so part of: RFER_RS01915
location: complement(392468..392719)
location: region:392468-392719:-1
so has part: feature:392468-392719:-1:exon

WP_011462711.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:392468-392719:-1:exon

RFER_RS01920
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01920
old locus tag: Rfer_0385
so part of: sequence
location: complement(392716..393969)
location: region:392716-393969:-1
so has part: feature:392716-393969:-1:exon
subclass of: SO_0000010

position:392716:-1
position: 392716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:393969:-1
position: 393969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392716-393969:-1:exon

RFER_RS01920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01920
old locus tag: Rfer_0385
EC number: 2.3.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011481723.1
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dihydrolipoamide acetyltransferase family protein
translation: MIEFKLPSLGADMDEGTLLEWHIKPGDVVKRGQVVAVVDTSKAAVDVEIWHDGVVHELRVAVGEKVPVDTVLATLLAPGEVAAAPAAASAAAPEPRAAAAAAPVARPAPATQRALEPDQLPATTRHPASPAARRRAKELGMDPDTVPGTGAQGSVTLADIEAAAHAAPAPGAAPSPALASDRQKAMRKAIAAAMSRSKREIPHYYLSETIPMTRALDWLRQRNEGLPMTERILTAALLLKAVAAALQRTPELNGFYRDGQFEPSVAVHAGVAISLRGGGLVAPALHDVGAKPLAQLMRELADLVKRARAGSLRSSEMMDPTITITNLGEQSVQSVFGVIYPPQVALVGLGGIAVRPWVEGGKVHALPLLCATLAADHRASDGHRGALFLAELRELLQQPQTLADATKPNPIQPGDTT
SIO_010081: RFER_RS01920
subclass of: SO_0000673
so part of: RFER_RS01920
location: complement(392716..393969)
location: region:392716-393969:-1
so has part: feature:392716-393969:-1:exon

WP_011462712.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:392716-393969:-1:exon

RFER_RS01925
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01925
old locus tag: Rfer_0386
so part of: sequence
location: complement(393966..394955)
location: region:393966-394955:-1
so has part: feature:393966-394955:-1:exon
subclass of: SO_0000010

position:393966:-1
position: 393966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:394955:-1
position: 394955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:393966-394955:-1:exon

RFER_RS01925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01925
old locus tag: Rfer_0386
EC number: 1.2.4.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011481722.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha-ketoacid dehydrogenase subunit beta
translation: MGRRISYRDALREALRAALQSDPRVFLMGEDVGCYGGTYAVSKGLLEEFGPERIRDTPLSELGFVGAGIGAALGGMRPIVEIMTVNFSLLALDPIVNSAAMLHHMSGGQFSVPLVIRMATGAGRQVAAQHSNSFECWYAHVPGLRVLAPATVEDARGMLQAALADPDPVLIFEHAQLYNSEGELPDDESAAVDIAGARVRRTGSDISLITYGGCLPKALQAADELASLGISAEVIDLRVLRPLDDATVMASVRRCRRAVVVDEGWRSGSLAAEVMARISEQAFFDLDAPPARVCSEEVPIPYARHLEEAALPQVPKIVAAVQAVMGAAA
SIO_010081: RFER_RS01925
subclass of: SO_0000673
so part of: RFER_RS01925
location: complement(393966..394955)
location: region:393966-394955:-1
so has part: feature:393966-394955:-1:exon

WP_011462713.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:393966-394955:-1:exon

RFER_RS01930
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: pdhA
locus tag: RFER_RS01930
old locus tag: Rfer_0387
so part of: sequence
location: complement(394955..395968)
location: region:394955-395968:-1
so has part: feature:394955-395968:-1:exon
subclass of: SO_0000010

position:395968:-1
position: 395968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:394955-395968:-1:exon

RFER_RS01930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: pdhA
locus tag: RFER_RS01930
old locus tag: Rfer_0387
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011481721.1
GO component: GO:0045250 - cytosolic pyruvate dehydrogenase complex [Evidence IEA]
GO function: GO:0004739 - pyruvate dehydrogenase (acetyl-transferring) activity [Evidence IEA]
GO process: GO:0006086 - acetyl-CoA biosynthetic process from pyruvate [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha
translation: MDKMKVPAPPSGPVPWDKPFALSLLSDMLRIRRMEERAAELYGQQKIRGFLHLYIGEEAVAAGALRALSADDKVVATYREHGHALLHGLKMDTIMAEMFGRQDGCSRGRGGSMHLFDRAHHFFGGQAIVGGGLPLATGLALADKLLKRRALTACFFGEGAVAEGAFHEAMNLAALWRLPVLFCCENNLYAMGTALARSESQTDLCLKAASYGMEVMTVDGMDVVAVHEAVRFAAQKVREASAPMFVELRTYRFRAHSMFDPDLYRAKQEIEAWKTRGPVHTFTARLKLQGILSEDEFLALDASAQAEVEAAVAFAEGSNWEPVEDLLRDVHTPAGAA
SIO_010081: RFER_RS01930
subclass of: SO_0000673
so part of: RFER_RS01930
location: complement(394955..395968)
location: region:394955-395968:-1
so has part: feature:394955-395968:-1:exon

WP_041790026.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:394955-395968:-1:exon

RFER_RS01935
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: acsA
locus tag: RFER_RS01935
old locus tag: Rfer_0388
so part of: sequence
location: complement(395956..397743)
location: region:395956-397743:-1
so has part: feature:395956-397743:-1:exon
subclass of: SO_0000010

position:395956:-1
position: 395956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397743:-1
position: 397743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395956-397743:-1:exon

RFER_RS01935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: acsA
locus tag: RFER_RS01935
old locus tag: Rfer_0388
EC number: 6.2.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009896300.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetate--CoA ligase
translation: MERPVVIHKVASDLRLSPNWVDYEAGRRVDVWADARHALQGLPGGGLNLGFEAVDRQAAGALRDHVALRFVARNAPPLDLRYFELAQQTNRFANVLRSLGVGKGDHLFVLAGRIPELYVAVLGALKNGSVVTPLFSAFGPEPIAARIQLGAGRVLVTTDALYQRKVKQIRAQTPTLVHVLLVAEDGGITNEPDTLDLGTLMASASDTFSTVETQPDDPALLHFTSGTTGTPKGALHVHEAVVTHFATGRYALDLHPQDRYWCTADPGWVTGTSYGIIAPLLQGVTSLIDREEFDAERWYTLLEQERISVWYTAPTAIRMLMKAGTELAQRHSHPDLRFIASVGEPLNPEAVWWGQEALGLPIHDNWWQTETGGIMIANTPAFDIKPGSMGRPLPGIDACIVEHLEAEGEPARVRVIEEANVEGELALKRGWPSMFRAYLNNEARYRKCFAGELYLTGDLAKRDADGYYWFVGRADDVIKSAGHLIGPFEVESVLMEHPAVAEAGVIGKPDPVVGEVVKAFVSLKDGYQAGETLRLDISAHARRRLGAAVAPKEIVFLPTLPRTRSGKIMRRLLKARELGLPEGDTSTLEGGAWTK
SIO_010081: RFER_RS01935
subclass of: SO_0000673
so part of: RFER_RS01935
location: complement(395956..397743)
location: region:395956-397743:-1
so has part: feature:395956-397743:-1:exon

WP_041791256.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:395956-397743:-1:exon

RFER_RS01940
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01940
old locus tag: Rfer_0389
so part of: sequence
location: complement(397785..398237)
location: region:397785-398237:-1
so has part: feature:397785-398237:-1:exon
subclass of: SO_0000010

position:397785:-1
position: 397785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:398237:-1
position: 398237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397785-398237:-1:exon

RFER_RS01940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01940
old locus tag: Rfer_0389
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012348680.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CBS domain-containing protein
translation: MASQLKDFATSMVAVVEPETPTLLVAQLMRKHHIGALVVVDTHEKTRPIGIVTDRDLVLELMAEGLDPAVFTAGDIMSVDLVLATPEMDAMDAVQLMKTHRLRRLVITDDKGRLVGIVTMEDVLELLARELANLAAGLAGARDREINERD
SIO_010081: RFER_RS01940
subclass of: SO_0000673
so part of: RFER_RS01940
location: complement(397785..398237)
location: region:397785-398237:-1
so has part: feature:397785-398237:-1:exon

WP_011462716.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:397785-398237:-1:exon

RFER_RS01945
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01945
old locus tag: Rfer_0390
so part of: sequence
location: complement(398245..398898)
location: region:398245-398898:-1
so has part: feature:398245-398898:-1:exon
subclass of: SO_0000010

position:398245:-1
position: 398245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:398898:-1
position: 398898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:398245-398898:-1:exon

RFER_RS01945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01945
old locus tag: Rfer_0390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007831990.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BON domain-containing protein
translation: MKTDSELKKDVLAEMLWDPLIPEARVGVSVTDGVVTLTGHLDTYAEKVAAKRAVERVSGVKAIAVELDVIPAGIHQRSDTEIAAAVEHALSWNTSVPQDRVKVTVEKGWVTLSGELDWNFQRRAVERMTRPLKGVVGIVDNIRLKALPVPANLSARIQDALTRQAQREAKRIEISMDGSVATLRGHVHSWAERNAAEGATWSAPGVSRVNNQLTIEA
SIO_010081: RFER_RS01945
subclass of: SO_0000673
so part of: RFER_RS01945
location: complement(398245..398898)
location: region:398245-398898:-1
so has part: feature:398245-398898:-1:exon

WP_011462717.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:398245-398898:-1:exon

RFER_RS01950
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01950
old locus tag: Rfer_0391
so part of: sequence
location: 399063..400100
location: region:399063-400100:1
so has part: feature:399063-400100:1:exon
subclass of: SO_0000010

position:399063:1
position: 399063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400100:1
position: 400100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399063-400100:1:exon

RFER_RS01950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01950
old locus tag: Rfer_0391
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPDIEAKLKFLRSPASYGSLGQQVELIETHMSWVFVLEQRVFKLKKPVCFPFLDFSTLQAREFYCREEVRLNARLAPGVYLGVVALQWQDGAFALVPEAQWPAPGETVDWLVVMRRLPRQRMLSELIARHSVARSDIDALLALLGAFYRAAPAAPVSANDYVSRLRHEQALNREVLLRPQFVLQDVRLAIERLDAALAQCTDLLRARASRRHVLDGHGDLRPDHVCLLDPPVVIDCLEFNPQLRQVDPFDEVAYLGLECDLAGAPWIGSQLVAGIADALGDHPGPSLMHFYTAYRAMLRARLAMAHLLDPRPRSPERWPAQSERYIAHALVALDAFNQTMHLQTP
SIO_010081: RFER_RS01950
subclass of: SO_0000673
so part of: RFER_RS01950
location: 399063..400100
location: region:399063-400100:1
so has part: feature:399063-400100:1:exon

WP_011462718.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:399063-400100:1:exon

RFER_RS01955
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: prs
locus tag: RFER_RS01955
old locus tag: Rfer_0392
so part of: sequence
location: complement(400069..401055)
location: region:400069-401055:-1
so has part: feature:400069-401055:-1:exon
subclass of: SO_0000010

position:400069:-1
position: 400069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:401055:-1
position: 401055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400069-401055:-1:exon

RFER_RS01955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: prs
locus tag: RFER_RS01955
old locus tag: Rfer_0392
EC number: 2.7.6.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017876189.1
GO function: GO:0004749 - ribose phosphate diphosphokinase activity [Evidence IEA]
GO process: GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribose-phosphate diphosphokinase
translation: MARHELAQGMLLYSLDSDDTFAQGLAASLGVKLAPHEYRRFEDGEHKLRPLLDPRGSDTFVVHSLHGDAQNSPHDKLCQLLMFIATLREHGAARVAAVVPYLAYARKDRQTKPFDPVSLRYVAQLFEAVGTTQLMVLEAHNVAAFQNAFRCPTMHLEAHQAFNAMALELAGDARLAVASPDPGGVKRAQLWRESLETTLLRPVGFAMVDKRRSAGVVSSENLVAGEVDGMRVLLLDDLIASGETMRRAALALRQSGAREVLACVAHGLFTGSAAQVLTDDSIARIIITDSVPPFRLPLACAARRKLSIASAVPLFAQAIKASAGAWSG
SIO_010081: RFER_RS01955
subclass of: SO_0000673
so part of: RFER_RS01955
location: complement(400069..401055)
location: region:400069-401055:-1
so has part: feature:400069-401055:-1:exon

WP_011462719.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:400069-401055:-1:exon

RFER_RS01960
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01960
old locus tag: Rfer_0393
so part of: sequence
location: 401220..401630
location: region:401220-401630:1
so has part: feature:401220-401630:1:exon
subclass of: SO_0000010

position:401220:1
position: 401220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401630:1
position: 401630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401220-401630:1:exon

RFER_RS01960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01960
old locus tag: Rfer_0393
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019427372.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKQSTVFLAGSLVALTVVSSTSFAQGSVDFGKNEYMASCASCHGASAKGDGAMRTYLTKAPTDLTIMAKRNAGVFPTQYAWEVIDGRTSAAIGSHGAREMPVWGYVYRAEDSQPADLHARTRIGSLLDYLARIQVK
SIO_010081: RFER_RS01960
subclass of: SO_0000673
so part of: RFER_RS01960
location: 401220..401630
location: region:401220-401630:1
so has part: feature:401220-401630:1:exon

WP_011462720.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:401220-401630:1:exon

RFER_RS01965
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01965
old locus tag: Rfer_0394
so part of: sequence
location: 401649..402272
location: region:401649-402272:1
so has part: feature:401649-402272:1:exon
subclass of: SO_0000010

position:401649:1
position: 401649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402272:1
position: 402272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401649-402272:1:exon

RFER_RS01965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01965
old locus tag: Rfer_0394
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013723099.1
GO process: GO:0009116 - nucleoside metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoribosyltransferase family protein
translation: MFRDRDEAAGRLAEKLKSYRGKNPLILAIPRGAVPMAKIVADKLGGELDVVLVRKLRAPHQPELALGSVNESGWTYLADFAQLYGGSSDYLEGEKRTQMETIRQRRAQYTPIRPPIDPAGRIVIVIDDGLATGATMISALHGLRAMKPAQLICAIPVSPPDTLAKVADLADEVVCLEAPPFFQAVGQFYQHFPQVDDDEVIELLKEA
SIO_010081: RFER_RS01965
subclass of: SO_0000673
so part of: RFER_RS01965
location: 401649..402272
location: region:401649-402272:1
so has part: feature:401649-402272:1:exon

WP_011462721.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:401649-402272:1:exon

RFER_RS01970
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01970
old locus tag: Rfer_0395
so part of: sequence
location: complement(402305..402952)
location: region:402305-402952:-1
so has part: feature:402305-402952:-1:exon
subclass of: SO_0000010

position:402305:-1
position: 402305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:402952:-1
position: 402952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402305-402952:-1:exon

RFER_RS01970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01970
old locus tag: Rfer_0395
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013723100.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dienelactone hydrolase family protein
translation: MKPTHAQLVHIPVDDVHIEGMLELPPGPLGIVLFAHGSGSSRHSPRNNYVARVLHEKGIGTLLMDLLTVAEDLDYQTRFDIALLTHRLLVATRWVRLEAATRQLPIGYFGASTGAAAALQAAAALGDNIQAVVSRGGRPDLAGNQSLEQVKSPTLLLVGGRDEDVIELNREAYARLPCTKELSIVPGATHLFEEAGTLEEVARQAAVWFNQYLKN
SIO_010081: RFER_RS01970
subclass of: SO_0000673
so part of: RFER_RS01970
location: complement(402305..402952)
location: region:402305-402952:-1
so has part: feature:402305-402952:-1:exon

WP_011462722.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:402305-402952:-1:exon

RFER_RS01975
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: amrS
locus tag: RFER_RS01975
old locus tag: Rfer_0396
so part of: sequence
location: complement(402972..404048)
location: region:402972-404048:-1
so has part: feature:402972-404048:-1:exon
subclass of: SO_0000010

position:402972:-1
position: 402972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404048:-1
position: 404048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402972-404048:-1:exon

RFER_RS01975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: amrS
locus tag: RFER_RS01975
old locus tag: Rfer_0396
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011615033.1
GO function: GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AmmeMemoRadiSam system radical SAM enzyme
translation: MQESSYPGRYWHWLDDGRMQCDLCPRDCRLHEGQRGACFVRMRQGGQMILTTYGRSSGFCIDPIEKKPLNHFYPGSSVLSFGTAGCNLACKFCQNWDISKSRDMDRLMDQASPEAIAMEAVKYGCKSVAFTYNDPVIFAEYAMDVADSCHARGVQAVAVTAGYMHDQPRRDFYAKMDAANVDLKAFTDDFYFKLTGSHLQPVLDTLVYLKRETRVWFEITTLLIPGHNDSNEEITAMSRWVMQELGPDVPLHFSAFHPDHKMPDVPATPAATLVRARNIALKAGLHYVYTGNVHHAEGDTTFCPSCHAPLIVRDWYQINQYRLDTNGHCPDCGAAVAGRFDAQAGDFGRQRIPIAIGA
SIO_010081: RFER_RS01975
subclass of: SO_0000673
so part of: RFER_RS01975
location: complement(402972..404048)
location: region:402972-404048:-1
so has part: feature:402972-404048:-1:exon

WP_011462723.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:402972-404048:-1:exon

RFER_RS01980
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: amrA
locus tag: RFER_RS01980
old locus tag: Rfer_0397
so part of: sequence
location: complement(404048..404689)
location: region:404048-404689:-1
so has part: feature:404048-404689:-1:exon
subclass of: SO_0000010

position:404689:-1
position: 404689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404048-404689:-1:exon

RFER_RS01980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: amrA
locus tag: RFER_RS01980
old locus tag: Rfer_0397
inference: COORDINATES: protein motif:HMM:TIGR04335.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AmmeMemoRadiSam system protein A
translation: MSKSHTKPHTAAHPDSHGAAAKGHTLLPIARATISTALGRPLEAPEQALWLQESGACFVTLTQRGQLRGCIGTLEARRALLADVKANALAAAFADPRFSPLVAAELEHTEIEVSLLSAMQAMQFENEAHALAQLQPGIDGVVFEFAHYRSTFLPQVWEQLPSVPEFMAHLKHKAGLPPGFWAPGVRLQRYSVSKWKETDLRPATAKAPNQENL
SIO_010081: RFER_RS01980
subclass of: SO_0000673
so part of: RFER_RS01980
location: complement(404048..404689)
location: region:404048-404689:-1
so has part: feature:404048-404689:-1:exon

WP_011462724.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:404048-404689:-1:exon

RFER_RS01985
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: amrB
locus tag: RFER_RS01985
old locus tag: Rfer_0398
so part of: sequence
location: complement(404670..405494)
location: region:404670-405494:-1
so has part: feature:404670-405494:-1:exon
subclass of: SO_0000010

position:404670:-1
position: 404670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:405494:-1
position: 405494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404670-405494:-1:exon

RFER_RS01985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: amrB
locus tag: RFER_RS01985
old locus tag: Rfer_0398
inference: COORDINATES: protein motif:HMM:TIGR04336.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AmmeMemoRadiSam system protein B
translation: MSLVRPPAVAGTFYPGQASVLLNDVTTLLTQARPGANLREPAPKALIVPHAGYIYSGATAARAYAELAGGRASIQRVVLLGPVHRVPVRGLALPGVDAFATPLGRIEVDQDAVAAIAHLPQVVVSRAAHAQEHSLEVQLPFLQAVLDDFKLVPLAVGDATPAQVAEVIEALWGGDETLIVISSDLSHFLPYGTAQAVDSETVQNMMQLNSSITHHQACGGTPVNGLLQAARQHHLQPELLGLCNSGDTAGDKSRVVGYAALAFRQELSDVQISH
SIO_010081: RFER_RS01985
subclass of: SO_0000673
so part of: RFER_RS01985
location: complement(404670..405494)
location: region:404670-405494:-1
so has part: feature:404670-405494:-1:exon

WP_011462725.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:404670-405494:-1:exon

RFER_RS01990
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01990
old locus tag: Rfer_0399
so part of: sequence
location: 405634..406542
location: region:405634-406542:1
so has part: feature:405634-406542:1:exon
subclass of: SO_0000010

position:405634:1
position: 405634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406542:1
position: 406542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405634-406542:1:exon

RFER_RS01990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01990
old locus tag: Rfer_0399
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019573647.1
GO component: GO:0005829 - cytosol [Evidence IEA]
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator ArgP
translation: MSTFDPDALECLAAIVEEGGFERAAVRLSITQSAVSQRLRSLEVQVGTVLIVRSRPLKPTSAGRLLLKHALQTRLLRADLQRDLKDLAPGAAGSGGDVERISIAINADSIATWALAALSELARRGLGLEIITDDQDFTIEWLREGRVLGCVTTLKQALRSCKMVPLGAMRYVAVAETAYAAAHCPDGLSPHNFRHVPFIAFNRKDDLQGEFIAHVFHLKHVALSQLYVPSSEGQVSAVLAGWGVSVLPELQVREHLRSGRLVNLAPGHVLPVDLYWHCWNLDSVVLDALTAALTEAAAVALR
SIO_010081: RFER_RS01990
subclass of: SO_0000673
so part of: RFER_RS01990
location: 405634..406542
location: region:405634-406542:1
so has part: feature:405634-406542:1:exon

WP_011462726.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:405634-406542:1:exon

RFER_RS01995
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS01995
old locus tag: Rfer_0400
so part of: sequence
location: 406565..407182
location: region:406565-407182:1
so has part: feature:406565-407182:1:exon
subclass of: SO_0000010

position:406565:1
position: 406565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407182:1
position: 407182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406565-407182:1:exon

RFER_RS01995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS01995
old locus tag: Rfer_0400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019427293.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TetR/AcrR family transcriptional regulator
translation: MNPDNAVRTSFKQQMLQAREEAIIQTANRLLAEKGFEAMTVDEVALQAGIAKASLYKHFASKEELAAAATARVMRRARDFIRALPEQAPPLDKLRAVLRWTLEVKLAGDMPSLPSRNSTLRTALIGNQDCMEGWMEVSDRLRAWIEAAQAAGALNPALPAVAVLYTFFARACDPALEFLRIGGRYQDEQIVTLVLSTCFEGLNAR
SIO_010081: RFER_RS01995
subclass of: SO_0000673
so part of: RFER_RS01995
location: 406565..407182
location: region:406565-407182:1
so has part: feature:406565-407182:1:exon

WP_011462727.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:406565-407182:1:exon

RFER_RS02000
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02000
old locus tag: Rfer_0401
so part of: sequence
location: complement(407247..407669)
location: region:407247-407669:-1
so has part: feature:407247-407669:-1:exon
subclass of: SO_0000010

position:407247:-1
position: 407247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:407669:-1
position: 407669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:407247-407669:-1:exon

RFER_RS02000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02000
old locus tag: Rfer_0401
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015011999.1
GO function: GO:0032559 - adenyl ribonucleotide binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: universal stress protein
translation: MKILLAVDGSAYTKKMLAYLTTHDELFSPGNEYFVLTVQPGIPARARAAVGKQVMDKYYMDEAERVLAPVAKFLLRHGIDAKSDWKIGHAGETIAQFADKGKFDMIIMGSHGHGTLVNLVMGSVATEVLAHCTVPVLLVR
SIO_010081: RFER_RS02000
subclass of: SO_0000673
so part of: RFER_RS02000
location: complement(407247..407669)
location: region:407247-407669:-1
so has part: feature:407247-407669:-1:exon

WP_011462728.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:407247-407669:-1:exon

RFER_RS02005
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02005
old locus tag: Rfer_0402
so part of: sequence
location: complement(407783..408622)
location: region:407783-408622:-1
so has part: feature:407783-408622:-1:exon
subclass of: SO_0000010

position:407783:-1
position: 407783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408622:-1
position: 408622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:407783-408622:-1:exon

RFER_RS02005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02005
old locus tag: Rfer_0402
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020227244.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta hydrolase
translation: MTDSTLSTFVALDGDNLAVQDWPLASQQVLRGVVLLVHGLGEHAGRYDRLAGRLNDWGFAVRGYDQYGHGESGGPRGGLPTDTRLLDDLSDIVDSTRARMDPHTPLILLGHSMGGLVAARFVALGLRPVQALVLSSPALDPGLNAIQKLLLAVLPKIAPDLRIGNGLDASLISHDSTVVAAYQADKLVHDRVSARLARFIADGGPATLAQAASWSVPTLLLYAGADRLVNPAGSRAFAAAAPKTVLSAHCFEALYHEIFNELDAAPVFAELKKWLDARF
SIO_010081: RFER_RS02005
subclass of: SO_0000673
so part of: RFER_RS02005
location: complement(407783..408622)
location: region:407783-408622:-1
so has part: feature:407783-408622:-1:exon

WP_011462729.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:407783-408622:-1:exon

RFER_RS02010
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02010
old locus tag: Rfer_0403
so part of: sequence
location: complement(408622..410097)
location: region:408622-410097:-1
so has part: feature:408622-410097:-1:exon
subclass of: SO_0000010

position:410097:-1
position: 410097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408622-410097:-1:exon

RFER_RS02010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02010
old locus tag: Rfer_0403
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013723301.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M20 family metallopeptidase
translation: MNVRIPAPALNTTQALNQISRAWDDDLVAQLSDYIAIPAKSPMFDADWVQHGFIDTVVRNAASWVEAQKVAGLTLEIIRLPGRTPVLFFEVAASTGSANHAVSNQTVLMYGHLDKQPEVTGWRSDLGPWTPKYEDGKLYGRGGADDGYAIYAAITAIQALKSQHVAHPRIVGLIETCEESGSYDLPPYIDALRARLGDVALVICLDSGAGNYDQLWLTNSLRGMASGTLKVEVLTEGVHSGDASGLVPSSFRILRHLLDRLEDSATGRLLPAPFHCEVPFERLRQAQATAAILGEELYKRFPWAHADCGGASQTMLPTTTDPLQALLSRTWTPTLSVTGAEGLPELKSAGNVLRPFTAFKLSLRLPPLVEAGQAVQQLKALLEDNAPYQARVSFVPDSHASGWNAPSTAPWFEQALNAASQDYFGAPCGYIGQGGTIPLMSMLSSGFPKAQMMVCGVLGPKSNAHGPNEFLHVPYAKKLTAAVAQVIAQVP
SIO_010081: RFER_RS02010
subclass of: SO_0000673
so part of: RFER_RS02010
location: complement(408622..410097)
location: region:408622-410097:-1
so has part: feature:408622-410097:-1:exon

WP_041791266.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:408622-410097:-1:exon

RFER_RS02015
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02015
old locus tag: Rfer_0404
so part of: sequence
location: complement(410237..411358)
location: region:410237-411358:-1
so has part: feature:410237-411358:-1:exon
subclass of: SO_0000010

position:410237:-1
position: 410237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:411358:-1
position: 411358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:410237-411358:-1:exon

RFER_RS02015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02015
old locus tag: Rfer_0404
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013899355.1
GO function: GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alkene reductase
translation: MPHRTATLFDPVHAGDLTLANRIVMAPLTRNRAPDAIPTPLMAQYYTQRASAGLIISEATAISHQGQGYADVPGLYGSEQLEGWKHVTHGVHGAGGKIVVQLWHVGRVSHTSLQPEGGQPVAPSAIAAKTKTVLLQDGVPVFVDTSEPRALQAYELPDIVHTYQAAARNAVQTAGFDGVEIHAANGYLLDQFLKAGSNLRRDDYGGSIENRARLLLEVMQAVTTAVGAGRVGIRLSPVTPANDAFDPDPQPLFDYVVRELATFKLAYVHIIEGATAGARELPERPFDYTGLRRAYRAAGGKGAWMVNNGLDKELAQAAIADGADLVAFGRLFIANPDLVARLRRGGPFNKWDSSTFYGGGAKGYTDYPTLKGA
SIO_010081: RFER_RS02015
subclass of: SO_0000673
so part of: RFER_RS02015
location: complement(410237..411358)
location: region:410237-411358:-1
so has part: feature:410237-411358:-1:exon

WP_011462731.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:410237-411358:-1:exon

RFER_RS02020
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: metW
locus tag: RFER_RS02020
old locus tag: Rfer_0405
so part of: sequence
location: complement(411439..412020)
location: region:411439-412020:-1
so has part: feature:411439-412020:-1:exon
subclass of: SO_0000010

position:411439:-1
position: 411439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412020:-1
position: 412020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:411439-412020:-1:exon

RFER_RS02020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: metW
locus tag: RFER_RS02020
old locus tag: Rfer_0405
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006299031.1
GO process: GO:0009086 - methionine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methionine biosynthesis protein MetW
translation: MSDPHTMDALARLVPEGARVLDLGCGDGAMLAHLQQTRGCSGYGIEINDANVLACVKRGVNVIQLNLDEGLSMFEDASFDVVLQIDTLQHLRNAEVMLRETVRVGRVGIVAFPNFAHWPNRLSILSGRMPVTRRLPYQWFDTPNIRVGTHADLGILAGRNGLTVLDSFGLQNAKVVRRLPNLLAGTSVYKLSR
SIO_010081: RFER_RS02020
subclass of: SO_0000673
so part of: RFER_RS02020
location: complement(411439..412020)
location: region:411439-412020:-1
so has part: feature:411439-412020:-1:exon

WP_011462732.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:411439-412020:-1:exon

RFER_RS02025
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02025
old locus tag: Rfer_0406
so part of: sequence
location: complement(412017..413159)
location: region:412017-413159:-1
so has part: feature:412017-413159:-1:exon
subclass of: SO_0000010

position:412017:-1
position: 412017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413159:-1
position: 413159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412017-413159:-1:exon

RFER_RS02025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02025
old locus tag: Rfer_0406
EC number: 2.3.1.31
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005799369.1
GO function: GO:0016747 - acyltransferase activity, transferring groups other than amino-acyl groups [Evidence IEA]
GO process: GO:0009058 - biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: homoserine O-acetyltransferase
translation: MKMIATPQSMQFDTVLPLQSGASLRGYALSFETYGELNADKSNAVLICHALNASHHVAGSYAGQDKSEGWWDNMIGPGKPLDTDKFFVIGVNNLGSCFGSTGPMHINPDTGRVYGADFPVVTVEDWVNAQARLLDALGIQTLAAVMGGSLGGMQALSWALQYPERVRHAVVIASAPNLTAENIAFNEVARRAIVTDPDFHGGHFYAHGTVPKRGLRIARMIGHITYLSDDVMNEKFGRQLIAAGKGGAQDDYLFSTLEAEFQIESYLRYQGDKFAEYFDANTYLLITRALDYFDPARTYGGDLSHALARASCKFLLVSFTTDWRFAPKRSREIVKALLHNRRDVSYAEIDAPHGHDAFLLDDPRYMGVLRSYFDSIKEPA
SIO_010081: RFER_RS02025
subclass of: SO_0000673
so part of: RFER_RS02025
location: complement(412017..413159)
location: region:412017-413159:-1
so has part: feature:412017-413159:-1:exon

WP_011462733.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:412017-413159:-1:exon

RFER_RS02030
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02030
old locus tag: Rfer_0407
so part of: sequence
location: complement(413213..415174)
location: region:413213-415174:-1
so has part: feature:413213-415174:-1:exon
subclass of: SO_0000010

position:413213:-1
position: 413213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:415174:-1
position: 415174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:413213-415174:-1:exon

RFER_RS02030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02030
old locus tag: Rfer_0407
EC number: 3.6.4.12
inference: COORDINATES: protein motif:HMM:TIGR00614.1
GO function: GO:0004386 - helicase activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RecQ family ATP-dependent DNA helicase
translation: MQQTLESVFGYPQFRPGQEAVISAVLAGRSAAAIFPTGSGKSLCYQLPALLLPHLTLVVSPLLALMQDQLAYLTRHGIAAASIDSAQSREQTQSVMAQARTGQLKILMISVERLKNERFRNFIAQVPISLLVVDEAHCISEWGHNFRPDYLKLPHYQRQFGIPQTLLLTATATPPVVADMQTRFAIAAHDVVTTGFYRPNLHLLVEAVSGRDKLQRLLEWLSMRANQPTIVYVTLQKTAEQVARHLSQHGLGAHAYHAGMPHEQRESIQKQFMAGRLNCIVAAIAFGMGIDKSDIRNVVHFDLPKSIEGYSQEIGRAGRDGLPSDCLALANRDSLQVLENFVYGDTPEAGGIRCVLDEILAVAPAKPWELSLNALSEQSNIRLLPLKTLLVQLELRGIIASRYAYFAEYRFKYLMEPEALLAHFKGERQQFVQAILRCARPARTWCTLDFEALYQTCQAEHSRVVTALDYLAAQGWIELEAKQMTEVYAVLAPGFDAQTLSLELLAYFQAKERSEIARIHAMLAFFAGEQCLSQHLAAYFGDSAAPLQCGHCSVCHGQVAHLPAPAPRAALAGQNFPALCGDLMARHRALGPSPMSADSLTRFLCGVAAPLLTQLKARSLAGFAALENHPYAEVRQWVGQQLANLEPGRPPTD
SIO_010081: RFER_RS02030
subclass of: SO_0000673
so part of: RFER_RS02030
location: complement(413213..415174)
location: region:413213-415174:-1
so has part: feature:413213-415174:-1:exon

WP_011462734.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:413213-415174:-1:exon

RFER_RS02035
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02035
old locus tag: Rfer_0408
so part of: sequence
location: 415421..415744
location: region:415421-415744:1
so has part: feature:415421-415744:1:exon
subclass of: SO_0000010

position:415421:1
position: 415421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415744:1
position: 415744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:415421-415744:1:exon

RFER_RS02035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02035
old locus tag: Rfer_0408
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009856000.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKHKVPVTGAASEPALAQEGPDAGGEDERIMARPDGYYWLALDGKQEFGPFESMELAQADRDASEGQDSGPGETLQEAEEEIGMSTWIDPETGEPAEGQSPPRLEEE
SIO_010081: RFER_RS02035
subclass of: SO_0000673
so part of: RFER_RS02035
location: 415421..415744
location: region:415421-415744:1
so has part: feature:415421-415744:1:exon

WP_011462735.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:415421-415744:1:exon

RFER_RS02040
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02040
old locus tag: Rfer_0409
so part of: sequence
location: complement(415810..416631)
location: region:415810-416631:-1
so has part: feature:415810-416631:-1:exon
subclass of: SO_0000010

position:415810:-1
position: 415810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:416631:-1
position: 416631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:415810-416631:-1:exon

RFER_RS02040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02040
old locus tag: Rfer_0409
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019922502.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MRSLPSKAKNLQIAPFSDTLPAPIVFRSAYVPAEGMYPQHRHAWGEFVYSFSGVMEVKLADHHYLAPPQYGIWLPPDVEHVGLNRYEAVHCSLYIAPQGCGNLPRAACALTVSPLVRALLEHLRQQPPEQPGTLQDERLLRVLVDQLALAPCAGSYLPSSDDALLGAVLRMLEEQPGDNRSLPELAHAVHTTERTLMRRARRDLGMSFVEWRQRLRVVKAMPLLEAGQTVETIALDLGYGSASAFITMFKRLVGTTPDEFRKGADGRINAGTK
SIO_010081: RFER_RS02040
subclass of: SO_0000673
so part of: RFER_RS02040
location: complement(415810..416631)
location: region:415810-416631:-1
so has part: feature:415810-416631:-1:exon

WP_011462736.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:415810-416631:-1:exon

RFER_RS02045
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02045
old locus tag: Rfer_0410
so part of: sequence
location: 416735..417676
location: region:416735-417676:1
so has part: feature:416735-417676:1:exon
subclass of: SO_0000010

position:416735:1
position: 416735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:417676:1
position: 417676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416735-417676:1:exon

RFER_RS02045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02045
old locus tag: Rfer_0410
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018913832.1
GO function: GO:0005215 - transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DMT family transporter
translation: MDTRKALDGQAIALMLVLCMVWGLQQVVLKATAADIAPVFQIALRSGAAAVLVGLLMAVRGERMALADGIWRPGLVVGLLFGLEFLLLGEGLRHTCASHMVVFLYTAPIFAALGLHWKLPTERLGALQWLGIALAFAGIALAFLGRSRGAVAEPAQMLWGDFLGLLAGLAWGATTVVVRCSSLAKAPATQTLLYQLLGAFVLLMAAAYATGQAHFRPTPQVWASLVFHSLVVSFASFLAWFWLLRKYLASRLGVFSFMTPLFGIAFGAWLLHEPIEPGFLLGAVPVLVGIVLVSGGGWVLQMLSGLGLRRKNV
SIO_010081: RFER_RS02045
subclass of: SO_0000673
so part of: RFER_RS02045
location: 416735..417676
location: region:416735-417676:1
so has part: feature:416735-417676:1:exon

WP_011462737.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:416735-417676:1:exon

RFER_RS02050
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02050
old locus tag: Rfer_0411
so part of: sequence
location: complement(417922..421053)
location: region:417922-421053:-1
so has part: feature:417922-421053:-1:exon
subclass of: SO_0000010

position:417922:-1
position: 417922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:421053:-1
position: 421053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:417922-421053:-1:exon

RFER_RS02050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02050
old locus tag: Rfer_0411
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798179.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: efflux RND transporter permease subunit
translation: MLSRIIDWSGRNRFLVLLATLFIVVGGIFAVLRTPIDALPDLSDVQVIVYTEYPGQAPQVVEDQVTYPLTTSMLSVPKSKVVRGFSFFGASFVYIIFEDGTDIYWARSRVLEYLNFASGRMPKGITPQIGPDATGVGWVYQYALLAKDKTLAELRSIQDWYVRYQLTKAHGVAEVASVGGFVQTYQVTVDPVKLRAYGIPLMKVAQVIRDSNRDVGGRAVEMAETEYMVRGKGYLRGKGDIELLVVKSDKGTPVLIRDIARVELTPDERRGLTELNGEGEVVSGIAMSRYGQNALEVISNLKAKIAEIGPGLPAGVTVQTVYDRSELINRAIDTLKRTLLEESLIVAVVCVVFLMHVRSALVAILMLPVGILMAFIAMRLLGMSSNLMSLGGIAIAIGAMIDAAIVMIENAHKHLERLPEDHTKLQRFEAMLEACKEVGPALFFSLLIITVSFLPVFALEGQEGRLFSPLAYTKTFSMASAALLSITLVPVLMLLFIRGKVMPEARNPVNRALIWAYRPIIAGVMRWKKLTIFLALVALAVSYYPASKLGSEFMPTLNEGSLLYMPASLPGMSITKAAELLQTQDKIIKSFPEVTSVYGKAGRANTATDPAPTEMFETVINLKPESEWRAGLTIDKLIAEMDKALQFPGVANSWTMPIKARIDMLSTGIRTPIGIKVFGKDLDEMEKLARQIEAVVKTVPGTSSAFAERITGGFYLNIEPDREQLARYGLSVGDLLDVVGTALGGEMVTTTVEGRERYGVTVRYPRELRSDPQQIATQVLVPTMEGAMIPLGQLAKVIVAKGAPGIRTENALLSAYIYVDIRDRDIGSYVRDAKKAVAEQVSFPSGYYVTWSGQFENMERALETMKIVIPVTLLSIFMLLYLNFRRITETLIVMLSVPFALVGGIWLMWALGYNLSVAVAVGFIALAGVAAETGVIMLIYLDHAWEDVKDKCRQSNRAPTVTDLYGAVMEGAVERVRPKMMTVVAIMAGLLPIMWGTGTGSEVMSRIAAPMVGGMISSTVLTLAVIPAIYALVKQWRLTRGME
SIO_010081: RFER_RS02050
subclass of: SO_0000673
so part of: RFER_RS02050
location: complement(417922..421053)
location: region:417922-421053:-1
so has part: feature:417922-421053:-1:exon

WP_011462738.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:417922-421053:-1:exon

RFER_RS02055
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02055
old locus tag: Rfer_0412
so part of: sequence
location: complement(421066..422679)
location: region:421066-422679:-1
so has part: feature:421066-422679:-1:exon
subclass of: SO_0000010

position:421066:-1
position: 421066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:422679:-1
position: 422679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421066-422679:-1:exon

RFER_RS02055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02055
old locus tag: Rfer_0412
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011805865.1
GO function: GO:0005215 - transporter activity [Evidence IEA]
GO process: GO:0006810 - transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: efflux RND transporter periplasmic adaptor subunit
translation: MKQGTGIAVAVMAAVIAAGAGYWLGHKGPASQAQGTVSATAAAVDTGAGSTSRKLLYYRNPMGLPDTSPTPKKDPMGMDYIAVYAGGADEEPAAANQVRISTEKVQKLGVRVEAAQLRALDKSVRASGRIEPDERRVYAISPKFEGYVERLHVNVTGQAVGKGQPLFEVYSPELVSAQREYAIAAQGVATLKDAGGQAQSGMQQLAGASLQRLRNWDISEAQIKALTQSGATTRTLTFRSPVSGIVMEKKAVQGMRFMPGEALYQIADLSTVWVIADVFEQDIGLVKNGAKATVSINAYPDKAFAGRVTYVYPTLKAETRTVAVRVELANPGLLLKPGMFAQVELPVTAKGQVITVPVSAVIDSGTRQIVLIQQAPGRFEPREVKLGARSDTHVEVREGVKEGEQVVVAANFLIDAESNLKAALGGLGSAAPAPATAASATAVAAPATQAAAPAKAVGHQATGTVDGVDLKAGTVSLSHGPIASLKWPAMTMEFKTANAALLQALKPGAKVTVEFIERQPGEWVITSAKPADPHAGQ
SIO_010081: RFER_RS02055
subclass of: SO_0000673
so part of: RFER_RS02055
location: complement(421066..422679)
location: region:421066-422679:-1
so has part: feature:421066-422679:-1:exon

WP_011462739.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:421066-422679:-1:exon

RFER_RS02060
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02060
old locus tag: Rfer_0413
so part of: sequence
location: complement(422676..423947)
location: region:422676-423947:-1
so has part: feature:422676-423947:-1:exon
subclass of: SO_0000010

position:422676:-1
position: 422676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:423947:-1
position: 423947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422676-423947:-1:exon

RFER_RS02060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02060
old locus tag: Rfer_0413
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009453357.1
GO function: GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TolC family protein
translation: MQHVLRAGAIAAVLVMAVPAGVLAGEALPGASLQTLLELAQASNPEYTSMRFEAQAAAERVKPAGALMDPKFRIEWMDITKMGEQNPTLWPSDVGSTKYTLMQDIPWFGKRDLKRDIAHFDAEGSQGKALGTWLELAARVKTLQAQRYYLRGNKELTQEILDLMARLEQVAQSRYAGGLAAQQDVIRAQVEQTNMRNELVMIESESLQVDARLNALLARPAMAALAAPESLRPLPAQSLLDAAKLEERVRNRNPQLFVEEARIQAAQKSRDLTYKNRYPDFTLSISPTQTQTNVKEWGLMLEVNIPLQQSSRRAMEREAEAMLSAARARKEAAANQVLAELAQNLAAIEAARRTELLASSSLLPQADLTFSSAMASYENGKLDFATLLDAQRQIRQAKQSRIKAQFEGQMRLAEIEKLLGEDL
SIO_010081: RFER_RS02060
subclass of: SO_0000673
so part of: RFER_RS02060
location: complement(422676..423947)
location: region:422676-423947:-1
so has part: feature:422676-423947:-1:exon

WP_011462740.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:422676-423947:-1:exon

RFER_RS02065
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02065
old locus tag: Rfer_0414
so part of: sequence
location: complement(423952..424608)
location: region:423952-424608:-1
so has part: feature:423952-424608:-1:exon
subclass of: SO_0000010

position:423952:-1
position: 423952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:424608:-1
position: 424608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423952-424608:-1:exon

RFER_RS02065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02065
old locus tag: Rfer_0414
inference: COORDINATES: protein motif:HMM:NF024853.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioredoxin domain-containing protein
translation: MKQKSIFTLAAVLLIAAFIVGAFFYKNQKTEQAAQLAAKNQTALVRADAPSFGNADAPVHIVEFFDPACGTCREFYPLVKNLMAAHPGKIRLTMRYAPFHPGSDQVVKVMEAARKQGQFQQTLEALFASQTVWVQNHTAHVDLIWSPLGTLGLDMERVKSDMNSPEIARTIAQDLADAKTMNVTMTPEYFVNGKPLPSFGFEQLQTLVDEALVNTNTK
SIO_010081: RFER_RS02065
subclass of: SO_0000673
so part of: RFER_RS02065
location: complement(423952..424608)
location: region:423952-424608:-1
so has part: feature:423952-424608:-1:exon

WP_011462741.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:423952-424608:-1:exon

RFER_RS02070
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02070
old locus tag: Rfer_0415
so part of: sequence
location: complement(424605..425024)
location: region:424605-425024:-1
so has part: feature:424605-425024:-1:exon
subclass of: SO_0000010

position:424605:-1
position: 424605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:425024:-1
position: 425024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:424605-425024:-1:exon

RFER_RS02070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02070
old locus tag: Rfer_0415
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012347184.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: disulfide bond formation protein B
translation: MKTSPWTLVFGAWLIAAMATLGALFMSEIMGFAPCVLCWYQRIFMFPLVFILAAGLFPFDPKVLRYALPLAAVGLLVAGFHLLLVAGYIPENLAPCRQGIPCSTVQVQWLGFITIPLLSFFAFLVVNALLITTYLKTPK
SIO_010081: RFER_RS02070
subclass of: SO_0000673
so part of: RFER_RS02070
location: complement(424605..425024)
location: region:424605-425024:-1
so has part: feature:424605-425024:-1:exon

WP_011462742.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:424605-425024:-1:exon

RFER_RS02075
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02075
old locus tag: Rfer_0416
so part of: sequence
location: complement(425053..425403)
location: region:425053-425403:-1
so has part: feature:425053-425403:-1:exon
subclass of: SO_0000010

position:425053:-1
position: 425053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:425403:-1
position: 425403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425053-425403:-1:exon

RFER_RS02075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02075
old locus tag: Rfer_0416
inference: COORDINATES: protein motif:HMM:NF023036.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: copper-binding protein
translation: MTTRFHSVLLLALATTGFALPAVAQTDHNMHGMPVAMPAAKTAEAALGEGLVKKIDKTKGTVTLAHGALPNGMPPMTMAYKVKDAAWLDKMTVGQKIRFATDPADGMTVSRFEPAK
SIO_010081: RFER_RS02075
subclass of: SO_0000673
so part of: RFER_RS02075
location: complement(425053..425403)
location: region:425053-425403:-1
so has part: feature:425053-425403:-1:exon

WP_011462743.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:425053-425403:-1:exon

RFER_RS02080
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02080
old locus tag: Rfer_0417
so part of: sequence
location: 425835..426116
location: region:425835-426116:1
so has part: feature:425835-426116:1:exon
subclass of: SO_0000010

position:425835:1
position: 425835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426116:1
position: 426116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425835-426116:1:exon

RFER_RS02080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02080
old locus tag: Rfer_0417
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798137.1
GO function: GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CopK family periplasmic copper-binding protein
translation: MSIRKSLIALSLVATALSAAAAGDSDIVQSVQLKDGTTMHHYKDGKMSMEGKNGNIVFMKEGMTMETTDGKTITMSGNEVARLYMQKKLENKK
SIO_010081: RFER_RS02080
subclass of: SO_0000673
so part of: RFER_RS02080
location: 425835..426116
location: region:425835-426116:1
so has part: feature:425835-426116:1:exon

WP_011462744.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:425835-426116:1:exon

RFER_RS02085
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02085
old locus tag: Rfer_0418
so part of: sequence
location: complement(426224..428674)
location: region:426224-428674:-1
so has part: feature:426224-428674:-1:exon
subclass of: SO_0000010

position:426224:-1
position: 426224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428674:-1
position: 428674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426224-428674:-1:exon

RFER_RS02085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02085
old locus tag: Rfer_0418
EC number: 7.2.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798146.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0019829 - ATPase-coupled monoatomic cation transmembrane transporter activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0015662 - P-type ion transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heavy metal translocating P-type ATPase
translation: MNHPVHPAASPEHPLAESGPGAGAAPPLKDPVCGMTVTAQSPHQLVHDGRMFYFCSAKCQGKFAADPLRYLSPASPMAASPSPELLASRSPSPADATIYTCPMHPEVRQDHPGNCPKCGMTLEPELPTLEDDENPELHDFQRRFWWTLPLTAIVFVLAMLGHRLQWMDMAVQSWVELLIATPIVLWAGWPFFVRGWQSVVKRSPNMWTLIGLGTGAAFVYSVVATVAPQVFPASFISMGRVAVYFEAAAVIISLTLLGQVLELKARSQTSAAIKSLLGLAPKTARRIRADGSEEDVPLSHVHVGDVLRIRPGEKVPVDGTVTEGSSSVDESMLTGEPLPVSKRVGDKVIGATLNTSGALVMRSERVGSSTVLAQIVQMVAQAQRSKAPMQRMADLVAGYFVMTVVAIAALTFFAWGFFGPEPSWVFGLINAVAVLIIACPCALGLATPMSIMVATGRGATQGVLFRDAAAIENLRKIDTLIIDKTGTLTEGHPAFDRAVPAPGFAADEVLRLAASLDQGSEHPLAETIVRAARERGMTLDKPEGFDSVSGIGVRGRVAGHQLALGNSTLMEQTGVPLAPLVSQAEALRAEGASVMHLAVDGQLAGLLAVSDPIKSSTPEALATLKAAGLRIVMATGDGLTTARAVAARLGLDEVYGEVKPADKLILVERLQKEGRVVAMAGDGINDAPALAQANVGIAMGTGTDVAMNSAQVTLVKGDLRGIAIARALSNATVANMKQNLLFALLYNALGIPIAAGVLYPLTGWLLSPLIAALAMSFSSVSVIGNALRLKRARLGGLLEPGKAKAPATPSDIERST
SIO_010081: RFER_RS02085
subclass of: SO_0000673
so part of: RFER_RS02085
location: complement(426224..428674)
location: region:426224-428674:-1
so has part: feature:426224-428674:-1:exon

WP_011462745.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:426224-428674:-1:exon

RFER_RS02090
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02090
old locus tag: Rfer_0419
so part of: sequence
location: complement(428717..429361)
location: region:428717-429361:-1
so has part: feature:428717-429361:-1:exon
subclass of: SO_0000010

position:428717:-1
position: 428717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429361:-1
position: 429361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428717-429361:-1:exon

RFER_RS02090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02090
old locus tag: Rfer_0419
EC number: 2.1.1.100
EC number: 2.1.1.334
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020205276.1
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: isoprenylcysteine carboxylmethyltransferase family protein
translation: MNQDPAAYGLWSLVVFNSAIFIMFAYSFFKPATARDWRTFSAFSAFIVALFVEMYGFPLTIYLFSGWLQTRYPGLDLLSHNTGHLWSTLLGEKGDPHFGPLHIASYVFLGFGFYLLSSAWKVLYEAQRQNVLAVTGPYARIRHPQYVAFVLIMLGFLLQWPTLLTLAMFPILLLMYARLAITEEAQMRKQFGAEFETYAAHTPRFLPSWRRRSA
SIO_010081: RFER_RS02090
subclass of: SO_0000673
so part of: RFER_RS02090
location: complement(428717..429361)
location: region:428717-429361:-1
so has part: feature:428717-429361:-1:exon

WP_011462746.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:428717-429361:-1:exon

RFER_RS23275
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS23275
old locus tag: Rfer_0420
so part of: sequence
location: complement(429358..429639)
location: region:429358-429639:-1
so has part: feature:429358-429639:-1:exon
subclass of: SO_0000010

position:429358:-1
position: 429358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429639:-1
position: 429639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429358-429639:-1:exon

RFER_RS23275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS23275
old locus tag: Rfer_0420
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011482127.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2933 domain-containing protein
translation: MNHLHKEHEAPHSFWASRYAIGLIVFGAVAGYFLLTEHLAHTVGALPYLLLLACPLMHIFMHHGHGNHGGHDSRPGDNNAEAGPVQPKPGEPS
SIO_010081: RFER_RS23275
subclass of: SO_0000673
so part of: RFER_RS23275
location: complement(429358..429639)
location: region:429358-429639:-1
so has part: feature:429358-429639:-1:exon

WP_011462747.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:429358-429639:-1:exon

RFER_RS02100
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02100
old locus tag: Rfer_0421
so part of: sequence
location: complement(429697..430122)
location: region:429697-430122:-1
so has part: feature:429697-430122:-1:exon
subclass of: SO_0000010

position:429697:-1
position: 429697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430122:-1
position: 430122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429697-430122:-1:exon

RFER_RS02100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02100
old locus tag: Rfer_0421
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011800658.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTHFRFIPLAAVLTSAVLLAACNTAPTTPMGASASSMATPDHMARMDTQMKTMQAMHDRMINAKTPQERSKLMAEHMKAMQDGMAMMGDMSSAGMGDMKGMPGMTGDMGAHHKMMAKRMEMMQMMMQMMMDRQSADMPMAK
SIO_010081: RFER_RS02100
subclass of: SO_0000673
so part of: RFER_RS02100
location: complement(429697..430122)
location: region:429697-430122:-1
so has part: feature:429697-430122:-1:exon

WP_041791273.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:429697-430122:-1:exon

RFER_RS02105
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02105
so part of: sequence
location: complement(430199..430402)
location: region:430199-430402:-1
so has part: feature:430199-430402:-1:exon
subclass of: SO_0000010

position:430199:-1
position: 430199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430402:-1
position: 430402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:430199-430402:-1:exon

RFER_RS02105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02105
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTLLALAVGALALFTTGVTLAQNGNMMNGGTWGTGWMGGYGGIGMPILLLVVIVALVVWVVRRGGK
SIO_010081: RFER_RS02105
subclass of: SO_0000673
so part of: RFER_RS02105
location: complement(430199..430402)
location: region:430199-430402:-1
so has part: feature:430199-430402:-1:exon

WP_041790031.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:430199-430402:-1:exon

RFER_RS02110
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02110
old locus tag: Rfer_0422
so part of: sequence
location: 430626..431309
location: region:430626-431309:1
so has part: feature:430626-431309:1:exon
subclass of: SO_0000010

position:430626:1
position: 430626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431309:1
position: 431309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:430626-431309:1:exon

RFER_RS02110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02110
old locus tag: Rfer_0422
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011804755.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heavy metal response regulator transcription factor
translation: MKILIVEDEPKTGDYLKQGLGEAGFVVDLLRDGTDGLHHALTEDYDLAILDVMLPGMDGWAVLAGIRKAGKDMPVLFLSARDHVDDRVKGLELGADDYLVKPFAFSELLARVRTLLRRGGKGSSTEFLRAADLELDLLRRRVTRAGKRIDLTSKEFALLELLLRRQDEVLPRSLIASQVWDMNFDSDTNVIEVAMRRLRAKVDDNFEPKLIRTVRGMGYVLESPACA
SIO_010081: RFER_RS02110
subclass of: SO_0000673
so part of: RFER_RS02110
location: 430626..431309
location: region:430626-431309:1
so has part: feature:430626-431309:1:exon

WP_011462749.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:430626-431309:1:exon

RFER_RS02115
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02115
old locus tag: Rfer_0423
so part of: sequence
location: 431300..432694
location: region:431300-432694:1
so has part: feature:431300-432694:1:exon
subclass of: SO_0000010

position:431300:1
position: 431300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:432694:1
position: 432694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431300-432694:1:exon

RFER_RS02115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02115
old locus tag: Rfer_0423
EC number: 2.7.13.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018308709.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]; GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0016310 - phosphorylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heavy metal sensor histidine kinase
translation: MRLIGRTSITRRLALLFVTASSAVLLALGFVIATSVEKHFEQQDMEVLSGKMELARHALKTFKSQDDLDRISQLLDNSLVGHHGLELIVFGPNHALLYATPNANFPFDMMAARAAQSPHRPMTWLLGDQTYRGIAAELPTGISERSRVVVAVALDIAHHQAFMRSFQQTLWFFVAGAALLTGLLGWLIARRGLAPLRAMREQAQVVTAQQLSHRLQVETVPVELAELAQSLNDMLARLEDAFHRISDFSSDIAHELRTPVSNLMTQTQVVLSRARDADEYRSILESNAEEFERMARMISDMLLLAKADNGLVVPSRETLHVAAEVLALFDYYDAGAEERGLGLSVEGDGEVSADRLMLRRALGNLLSNAVRHSTAHTTVRVRVHTDQDAVSIGMENTGDGIAQEHLERVFDRFFRVDPSRQRSTEGTGLGLAITKSIVVAHGGTITVASIGKVTTFTIRLPRVP
SIO_010081: RFER_RS02115
subclass of: SO_0000673
so part of: RFER_RS02115
location: 431300..432694
location: region:431300-432694:1
so has part: feature:431300-432694:1:exon

WP_041790033.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:431300-432694:1:exon

RFER_RS02120
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02120
old locus tag: Rfer_0424
so part of: sequence
location: 432858..433322
location: region:432858-433322:1
so has part: feature:432858-433322:1:exon
subclass of: SO_0000010

position:432858:1
position: 432858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433322:1
position: 433322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:432858-433322:1:exon

RFER_RS02120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02120
old locus tag: Rfer_0424
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011463448.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4148 domain-containing protein
translation: MKTKFAAITLVLASGLIAGTPALADVTRAQVKTELAEAIRTGDMLAPGNRGLKLNELYPSRYPAKQVQASLTREQVKAELAQAIRTGDMLASGEQSRKLNELYPSRYPAKQVQATLSREQVKAELAEAIRTGNFMISDNGQKCNEAHPSMHPSV
SIO_010081: RFER_RS02120
subclass of: SO_0000673
so part of: RFER_RS02120
location: 432858..433322
location: region:432858-433322:1
so has part: feature:432858-433322:1:exon

WP_011462751.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:432858-433322:1:exon

RFER_RS02125
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02125
old locus tag: Rfer_0425
so part of: sequence
location: complement(433434..433916)
location: region:433434-433916:-1
so has part: feature:433434-433916:-1:exon
subclass of: SO_0000010

position:433434:-1
position: 433434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433916:-1
position: 433916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433434-433916:-1:exon

RFER_RS02125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02125
old locus tag: Rfer_0425
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSAINSPAWLGTLRTYVVLVTLLNLGWEILQLPLYTIWSTGSHRDIVFALLHCTAGDVLIAVCSLVFSLLMAGRQEWPDSRFKTIALITIQLGLGYTVYSEWHNTTVTQSWAYSAAMPRLLGIGLAPVAQWLFVPGFVFWWIYRRLPVGPSTLMDSHSLK
SIO_010081: RFER_RS02125
subclass of: SO_0000673
so part of: RFER_RS02125
location: complement(433434..433916)
location: region:433434-433916:-1
so has part: feature:433434-433916:-1:exon

WP_011462752.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:433434-433916:-1:exon

RFER_RS02130
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02130
old locus tag: Rfer_0426
so part of: sequence
location: 434107..434565
location: region:434107-434565:1
so has part: feature:434107-434565:1:exon
subclass of: SO_0000010

position:434107:1
position: 434107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434565:1
position: 434565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:434107-434565:1:exon

RFER_RS02130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02130
old locus tag: Rfer_0426
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKYFFSSRRTRYTAAVMLFVWLMSLGIGVANACLVQHNPAKDEFLGHTRSGYMSKATIERERALDNFAKAHVQAGENDKLPEKLACLNFCAAEQDTLVKDHADTLVAQDIVPVLFLTWLLMPALDPIPQPEAFGSLTWSEPPVSIRYLRFTI
SIO_010081: RFER_RS02130
subclass of: SO_0000673
so part of: RFER_RS02130
location: 434107..434565
location: region:434107-434565:1
so has part: feature:434107-434565:1:exon

WP_011462753.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:434107-434565:1:exon

RFER_RS24810
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS24810
so part of: sequence
location: 434833..434955
location: region:434833-434955:1
so has part: feature:434833-434955:1:exon
subclass of: SO_0000010

position:434833:1
position: 434833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434955:1
position: 434955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:434833-434955:1:exon

RFER_RS24810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS24810
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAALIDVKKCKVLRAAPRLMQIMRVFARHKFLGALFGRGH
SIO_010081: RFER_RS24810
subclass of: SO_0000673
so part of: RFER_RS24810
location: 434833..434955
location: region:434833-434955:1
so has part: feature:434833-434955:1:exon

WP_279587694.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:434833-434955:1:exon

RFER_RS24420
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS24420
so part of: sequence
location: complement(434971..435216)
location: region:434971-435216:-1
so has part: feature:434971-435216:-1:exon
subclass of: SO_0000010

position:434971:-1
position: 434971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435216:-1
position: 435216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:434971-435216:-1:exon

RFER_RS24420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS24420
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHLGDGGSGKRRLSERGEKLGQRGAQFGLDRRAHHVNIHRRQLVVQQLQLFNVGRRQQVTPQREHLSEFEKDQPELLEGFP
SIO_010081: RFER_RS24420
subclass of: SO_0000673
so part of: RFER_RS24420
location: complement(434971..435216)
location: region:434971-435216:-1
so has part: feature:434971-435216:-1:exon

WP_244095783.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:434971-435216:-1:exon

RFER_RS02140
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02140
old locus tag: Rfer_0428
so part of: sequence
location: 435234..436244
location: region:435234-436244:1
so has part: feature:435234-436244:1:exon
subclass of: SO_0000010

position:435234:1
position: 435234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436244:1
position: 436244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435234-436244:1:exon

RFER_RS02140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02140
old locus tag: Rfer_0428
inference: COORDINATES: protein motif:HMM:NF015094.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AarF/UbiB family protein
translation: MLIRAALADVPDLWIPDVIASCSGETVLTMEYSPGERVDLYAKSHPQALPRVVNTLVKLMLHSIFEEGLFHADPHPGNVFVLPDGRLSLLDFGNTGDLDEPMRESLTLLLEAVVKGDARAATEAYLEMAPASEKVNHVALLVDIKAVLYEIRRTNLEDVSIGSAFEALLRAGSRNGVHKPGEFVLLTRAFAILESMIGLLAPGYNHMESFREEISRLTAQHFSPERIKDKTTKLAREMERLVTEAPGDTRRVLRRFAEGNLGRLPGLEAVGRRFNRNLERLTGAIAFAALVIGGSMLLMTPMGGWHDTLGNTLIISGFVGIVIIYLRALRRDLDQR
SIO_010081: RFER_RS02140
subclass of: SO_0000673
so part of: RFER_RS02140
location: 435234..436244
location: region:435234-436244:1
so has part: feature:435234-436244:1:exon

WP_166485634.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:435234-436244:1:exon

RFER_RS02145
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02145
old locus tag: Rfer_0429
so part of: sequence
location: 436356..436691
location: region:436356-436691:1
so has part: feature:436356-436691:1:exon
subclass of: SO_0000010

position:436356:1
position: 436356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436691:1
position: 436691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:436356-436691:1:exon

RFER_RS02145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02145
old locus tag: Rfer_0429
inference: COORDINATES: protein motif:HMM:NF012451.2
GO process: GO:0006457 - protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: J domain-containing protein
translation: MECEATLYEILEVSPHASAQVIRAAYRCLAQCNHPDKNPGSAAASERQAQINFAYGVLSDPGKRRRDDQRMGAQQESDIERRGSDQAMPAHPKAMNDTPPVSRAFVFRPFK
SIO_010081: RFER_RS02145
subclass of: SO_0000673
so part of: RFER_RS02145
location: 436356..436691
location: region:436356-436691:1
so has part: feature:436356-436691:1:exon

WP_011462756.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:436356-436691:1:exon

RFER_RS24815
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS24815
so part of: sequence
location: complement(436720..437154)
location: region:436720-437154:-1
so has part: feature:436720-437154:-1:exon
subclass of: SO_0000010

position:436720:-1
position: 436720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:437154:-1
position: 437154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:436720-437154:-1:exon

RFER_RS24815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS24815
inference: COORDINATES: protein motif:HMM:NF026183.2
GO function: GO:0051287 - NAD binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD-binding protein
translation: MFALFAENIFYCGAVSAGHTTKLLHQFVVLGNAAILAEAFSCASKTGVNLEVLCDVIASGGANSTAFQRFRPYVLEGNDQLFRFSLANAHKDMHYYAQMTGEAQAVSLIGDTVHNVYTMAGNLGYKTAFVPHLLSSFNRLNGSS
SIO_010081: RFER_RS24815
subclass of: SO_0000673
so part of: RFER_RS24815
location: complement(436720..437154)
location: region:436720-437154:-1
so has part: feature:436720-437154:-1:exon

WP_279587715.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:436720-437154:-1:exon

RFER_RS24820
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS24820
pseudo: true
so part of: sequence
location: complement(<437128..>437652)
location: region:437128-437652:-1
so has part: feature:437128-437652:-1:exon
subclass of: SO_0000010

position:437128:-1
position: 437128
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:437652:-1
position: 437652
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437128-437652:-1:exon

RFER_RS24820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS24820
inference: COORDINATES: protein motif:HMM:NF015411.2
GO function: GO:0051287 - NAD binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: NAD(P)-dependent oxidoreductase
SIO_010081: RFER_RS24820
subclass of: SO_0000673
so part of: RFER_RS24820
location: complement(<437128..>437652)
location: region:437128-437652:-1
so has part: feature:437128-437652:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:437128-437652:-1:exon

RFER_RS23870
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS23870
old locus tag: Rfer_0431
so part of: sequence
location: complement(437683..437901)
location: region:437683-437901:-1
so has part: feature:437683-437901:-1:exon
subclass of: SO_0000010

position:437683:-1
position: 437683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:437901:-1
position: 437901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437683-437901:-1:exon

RFER_RS23870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS23870
old locus tag: Rfer_0431
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHDTSQEATIGHVVARALARVEPLSKQVLDGLNCAGWVGCEYPPQVGMKPAAHRLDWAGSSPTCDELALRPM
SIO_010081: RFER_RS23870
subclass of: SO_0000673
so part of: RFER_RS23870
location: complement(437683..437901)
location: region:437683-437901:-1
so has part: feature:437683-437901:-1:exon

WP_166485635.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:437683-437901:-1:exon

RFER_RS02155
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02155
old locus tag: Rfer_0432
so part of: sequence
location: complement(437894..438148)
location: region:437894-438148:-1
so has part: feature:437894-438148:-1:exon
subclass of: SO_0000010

position:437894:-1
position: 437894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:438148:-1
position: 438148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437894-438148:-1:exon

RFER_RS02155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02155
old locus tag: Rfer_0432
inference: COORDINATES: protein motif:HMM:NF012610.2
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GntR family transcriptional regulator
translation: MYDEFFTFMRDLFKSIAPCPCFSDEVADVRKDDIRDGRLVAGDKLPTEVSLIGRLGISRSLTTHRQVLAFIQTGHSALAGDPLA
SIO_010081: RFER_RS02155
subclass of: SO_0000673
so part of: RFER_RS02155
location: complement(437894..438148)
location: region:437894-438148:-1
so has part: feature:437894-438148:-1:exon

WP_041790039.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:437894-438148:-1:exon

RFER_RS02160
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02160
old locus tag: Rfer_0433
so part of: sequence
location: 438300..439064
location: region:438300-439064:1
so has part: feature:438300-439064:1:exon
subclass of: SO_0000010

position:438300:1
position: 438300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439064:1
position: 439064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438300-439064:1:exon

RFER_RS02160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02160
old locus tag: Rfer_0433
EC number: 1.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009551596.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MTVFAQYPSLTDRTVLITGGATSIGACLVEQFTAQGAKVGFIDIDTAAGSTLASALAGARHAPLFVHADLTDIAALESAIEKVRQHFGPINALLNNAANDRRHTIEETTSETWDAGIAVNLKHQFFAARNVAPDMRKAGGGSIVNFGSLSWMLKQGGMPVYTTSKSAVQGLTRSLARDFGPFNIRVNTLVPGWVMTEKQLRLWVDDAARADIARGQCINQPVLAEHIARMALFLAADDSAMCTAQNFVVDGGWV
SIO_010081: RFER_RS02160
subclass of: SO_0000673
so part of: RFER_RS02160
location: 438300..439064
location: region:438300-439064:1
so has part: feature:438300-439064:1:exon

WP_011462758.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:438300-439064:1:exon

RFER_RS02165
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02165
old locus tag: Rfer_0434
so part of: sequence
location: complement(439184..440401)
location: region:439184-440401:-1
so has part: feature:439184-440401:-1:exon
subclass of: SO_0000010

position:439184:-1
position: 439184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:440401:-1
position: 440401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439184-440401:-1:exon

RFER_RS02165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02165
old locus tag: Rfer_0434
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013539978.1
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MLSLPRSARLATNVHFFLNGLAFATWGVHVPTFKHLHGLSEAEVALAMLAAGVGALVAVLWAGALVGRFGARAVCAVSGLMTAAAVGALLQLPSYWTGVMGLFVFGVANSLFDVAMNAHAVEVEAAYGRPIMSSCHGFFSLGGLGGAALASLLAVAGVAATTHTLWVAIGAAALTIAVVPAMLPDRAQTSDETGYSFMRPRGVIVLLGAMAALGLVAEGAMYDWSVLYLRESLASPQALAALAYASFSVAMAIGRFAGDRARARLGALTLLSVGGTLAASAMLAVLLIGHPVAALAGFALVGLGISNVVPVLFSCASRVPGISPAHGISGVASLGYLGFLSGPPIIGAVAQVATLPVALCLVALFAAALAVLARRVLPIMGELGTSTDDKASRSVPVGQEPRQHG
SIO_010081: RFER_RS02165
subclass of: SO_0000673
so part of: RFER_RS02165
location: complement(439184..440401)
location: region:439184-440401:-1
so has part: feature:439184-440401:-1:exon

WP_244095784.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:439184-440401:-1:exon

RFER_RS02170
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02170
old locus tag: Rfer_0435
so part of: sequence
location: complement(440514..441404)
location: region:440514-441404:-1
so has part: feature:440514-441404:-1:exon
subclass of: SO_0000010

position:440514:-1
position: 440514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:441404:-1
position: 441404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440514-441404:-1:exon

RFER_RS02170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02170
old locus tag: Rfer_0435
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007738510.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)-dependent oxidoreductase
translation: MKKNIIVTGGSGMAGKWVVKDLLDHGHQVMNLDRTVLPNSAARTMITDLTDAGQVFNALCSTTVRHEFSESIKPAPIDAIIHFAAIPRIMTHPDNEVFRINVMSTYNVLDAASKYGIKKVIIASSETTYGIVFADTYRMPEYLPLDEEYPVDPMDSYAMSKVINEATAKAFHARTGSDIYCLRIGNVIDPVDYAKFPEYFKDPGFRRRITWSYIDARDLATAARLGVDKDGLGFQVMNVAADDVSSDLPTAELLKRFYPTVPVKKTLGEFETLLSNEKIKRLLGFKQQYNWRSHVK
SIO_010081: RFER_RS02170
subclass of: SO_0000673
so part of: RFER_RS02170
location: complement(440514..441404)
location: region:440514-441404:-1
so has part: feature:440514-441404:-1:exon

WP_011462760.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:440514-441404:-1:exon

RFER_RS02175
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02175
old locus tag: Rfer_0436
so part of: sequence
location: complement(441465..442124)
location: region:441465-442124:-1
so has part: feature:441465-442124:-1:exon
subclass of: SO_0000010

position:441465:-1
position: 441465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:442124:-1
position: 442124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441465-442124:-1:exon

RFER_RS02175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02175
old locus tag: Rfer_0436
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007584463.1
GO function: GO:0036361 - racemase activity, acting on amino acids and derivatives [Evidence IEA]
GO process: GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aspartate/glutamate racemase family protein
translation: MRTVVVVHTGPATIQPIKQQFQQILPDVRVINIMDDSLLNDVMAAGHLTEAVTGRIFSYMQLGQQMGAVALLNACSSVGEAASAARAAISIPIIKIDDTMAERAVASGPRIGVVATVKTTLEPTVRLIKAKAEAAGKSVAVTEALAEGGFQALLDGKSELHDEIVKRTIQSLAGKVDVIVLAQVSMARLVPSLTDMKVPVLSSPQSGVEAVRDALASRH
SIO_010081: RFER_RS02175
subclass of: SO_0000673
so part of: RFER_RS02175
location: complement(441465..442124)
location: region:441465-442124:-1
so has part: feature:441465-442124:-1:exon

WP_011462761.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:441465-442124:-1:exon

RFER_RS02180
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02180
old locus tag: Rfer_0437
so part of: sequence
location: complement(442155..443660)
location: region:442155-443660:-1
so has part: feature:442155-443660:-1:exon
subclass of: SO_0000010

position:442155:-1
position: 442155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443660:-1
position: 443660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442155-443660:-1:exon

RFER_RS02180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02180
old locus tag: Rfer_0437
EC number: 7.5.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013691264.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sugar ABC transporter ATP-binding protein
translation: MVPYLQVKNISKTFAGVKALNRVSLHVASGEVLAIAGENGAGKSTLMKIMTGVYQPDPGGEIWINGVLVPHLTGTAHARQLGVCIIYQELSVVDNLTIAENIFLSKEISNRLGFLDRRAMHAATRQLLDSLDMQLDAGTRVGDLSIGQKQMVEIAKAISNQSKIVIMDEPTASLSHHEAMVLKEIIRKLRSEGIGIIYITHRLEEIFDLADRVTVLRDGACVATLPVEQLDRARLVKMMVDREQSDLYGDYQCHATQKVALEAKGLTLKHRTAHTVSVRDCSFRVHEGEILGFFGLVGAGRTELMEMVFGLRPYHGTIELGGQPVAIHSPRAAIDHGLGFVTEDRKSGGLVLGMNIRENFSLTHLDTYSTLSFISRLAETFGCQKFVLRLGIKTPSVEQTVGNLSGGNQQKVVIAKWVARSPKVLIVDEPTRGIDIAAKADVHRLLQELASRGMAVIVVSSDLPEVLAISDRVIVLREGAITAKLSRQQATQHVVMEAAAA
SIO_010081: RFER_RS02180
subclass of: SO_0000673
so part of: RFER_RS02180
location: complement(442155..443660)
location: region:442155-443660:-1
so has part: feature:442155-443660:-1:exon

WP_011462762.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:442155-443660:-1:exon

RFER_RS02185
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02185
old locus tag: Rfer_0438
so part of: sequence
location: complement(443711..444592)
location: region:443711-444592:-1
so has part: feature:443711-444592:-1:exon
subclass of: SO_0000010

position:443711:-1
position: 443711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444592:-1
position: 444592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:443711-444592:-1:exon

RFER_RS02185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02185
old locus tag: Rfer_0438
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018418428.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sugar-binding protein
translation: MNATAKDVKDLRIAVIPKVAVPFFDDCNNGAKAAADKLGVQYQWVVPQNTQGSTQVRILEDLISKKVDGIAISVNEPKSVEAAIKKAVASGIKVVTFDSDSANSGRSMYIGTINSAAGETMGESMAKAIDGEGEVAILTGQLGAANLNERITGIKKSLSKYPKIKVVATEGTEDDLAKAVSTTESLFRGHPALKGIFGVSQVGGPAVSKVMATKEFGSKKGAVKVFAFDDLPDTVKGVKEGYIQGIMVQRPVTMGKLAVEHLVDQITGKEPAPKDVDTGVNVVTSQNLGSYTK
SIO_010081: RFER_RS02185
subclass of: SO_0000673
so part of: RFER_RS02185
location: complement(443711..444592)
location: region:443711-444592:-1
so has part: feature:443711-444592:-1:exon

WP_244095910.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:443711-444592:-1:exon

RFER_RS02190
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02190
old locus tag: Rfer_0439
so part of: sequence
location: complement(444751..445665)
location: region:444751-445665:-1
so has part: feature:444751-445665:-1:exon
subclass of: SO_0000010

position:444751:-1
position: 444751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:445665:-1
position: 445665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444751-445665:-1:exon

RFER_RS02190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02190
old locus tag: Rfer_0439
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013691262.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0008643 - carbohydrate transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MSVLLAVILVGGGIAMVTPYFLTTDNLMGVFRSFSLTAIMSIGMVMVIITGGIDLSVGSVMGLSGLVTALAFQNGFSTVVSVSCGLGVGFLFGLTNGLLVTAGRLPPFIATLGTLSIGRGLMYIVTKGVPATPETPEAFSVIGQGYIGSVPAPVIIMLVLALIFSVIMTFTTFGRHVYATGGNEQAAWLSGVNTSRIKLTVYTLSGTISALAGIVAFSRYLSAEPASGFGVELDVIAAAAIGGASLAGGVGSVMGAILGAALTGIIANGVVLMNINTYAQQAITGAVILIAVSIDVWRNARKER
SIO_010081: RFER_RS02190
subclass of: SO_0000673
so part of: RFER_RS02190
location: complement(444751..445665)
location: region:444751-445665:-1
so has part: feature:444751-445665:-1:exon

WP_084795418.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:444751-445665:-1:exon

RFER_RS02195
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02195
old locus tag: Rfer_0440
so part of: sequence
location: complement(446021..447088)
location: region:446021-447088:-1
so has part: feature:446021-447088:-1:exon
subclass of: SO_0000010

position:446021:-1
position: 446021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:447088:-1
position: 447088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446021-447088:-1:exon

RFER_RS02195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02195
old locus tag: Rfer_0440
EC number: 1.1.1.93
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019924620.1
GO function: GO:0009027 - tartrate dehydrogenase activity [Evidence IEA]
GO process: GO:0046395 - carboxylic acid catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tartrate dehydrogenase
translation: MKTYEIACIPGDGIGKEIVPAGQTVLAALAASRNTFKFEFENFGWGGDWYRRHGEMMPANGLDALRNKDAILFGSAGDPDILDHITLWGLRLKICQGFDQYANVRPTRILPGIDAPLKRCTPEDLNWVIVRENSEGEYAGVGGRVHQGHPLEVATDLSVMTRAGVERIMRYAFKLAQSRPRKLLTVVTKSNAQRHAMVMWDEIAAQISKEFPDVKWDKELVDAATARMVNRPATLDTLVATNLHADILSDLAAALAGSLGIAPTGNIDPERRYPSMFEPIHGSAFDIMGKGLANPVGTFWSCVMLLEHLGEEAAAAQLMAVIEQVTADPALHTRDLGGSATTAEVTQAVCARIAA
SIO_010081: RFER_RS02195
subclass of: SO_0000673
so part of: RFER_RS02195
location: complement(446021..447088)
location: region:446021-447088:-1
so has part: feature:446021-447088:-1:exon

WP_011462765.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:446021-447088:-1:exon

RFER_RS02200
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02200
old locus tag: Rfer_0441
so part of: sequence
location: 447187..448128
location: region:447187-448128:1
so has part: feature:447187-448128:1:exon
subclass of: SO_0000010

position:447187:1
position: 447187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448128:1
position: 448128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447187-448128:1:exon

RFER_RS02200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02200
old locus tag: Rfer_0441
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020656845.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR substrate-binding domain-containing protein
translation: MPTPASAPSEMAFFSLLVRSGSFSAAARELDITTPAVSKRLAQMEARLGVQLLNRTTRRIGLTPEGEVYLEHARRILADIGDMEQLVSNSVAAPKGLLRVNATLGFGRSHIAPLISDFAKRYPEVQIQLQLTVNPPSLTEDAFDVCIRFGEPPDARMIARRIASNRRLICAAPAYLTRQGTPQVPNDLAQHNCICIRQGEEAYGIWHLRSGQRSETVKVRGTLSTNDGEIAVNWALAGHGLIMRAEWDIAKYLASGRLRQVLANWQTPGADIHAVYPQSLQTAARVRAFVDFVVNAFSASNPLGQVLQEEISS
SIO_010081: RFER_RS02200
subclass of: SO_0000673
so part of: RFER_RS02200
location: 447187..448128
location: region:447187-448128:1
so has part: feature:447187-448128:1:exon

WP_011462766.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:447187-448128:1:exon

RFER_RS02205
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02205
old locus tag: Rfer_0442
so part of: sequence
location: 448413..449267
location: region:448413-449267:1
so has part: feature:448413-449267:1:exon
subclass of: SO_0000010

position:448413:1
position: 448413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449267:1
position: 449267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:448413-449267:1:exon

RFER_RS02205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02205
old locus tag: Rfer_0442
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007732225.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family NAD(P)-dependent oxidoreductase
translation: MTHAALTSGSVAVITGGAAGIGLAAAKRMAQLGLRVCIADLGTDRLIRAAQEVVLLAAGGTDDVMTLETDVSRVEDLRRLEEVVRDRFGGTDILMNNAGIQPGSAMFGPAGNWERVLDVNLWGVIHSTQIFVPAMIKRGRPGLVINTGSKQGITTPPGDPAYNVSKAGLKAFTEALQHELRNTPNCRINAHLLIPGFVFTDLTAQGRTEKPAGAWTPEQTVDFMMERLEAGDFYILCPDNDVPRSLDERRILWAAGDVVENRPPLSRWHPDYAKAFEAFSQKKS
SIO_010081: RFER_RS02205
subclass of: SO_0000673
so part of: RFER_RS02205
location: 448413..449267
location: region:448413-449267:1
so has part: feature:448413-449267:1:exon

WP_011462767.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:448413-449267:1:exon

RFER_RS02210
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02210
old locus tag: Rfer_0443
so part of: sequence
location: complement(449277..450074)
location: region:449277-450074:-1
so has part: feature:449277-450074:-1:exon
subclass of: SO_0000010

position:449277:-1
position: 449277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450074:-1
position: 450074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449277-450074:-1:exon

RFER_RS02210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02210
old locus tag: Rfer_0443
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020228346.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydroxypyruvate isomerase family protein
translation: MPKFAANLSMLYPELDFLDRFAAAAQDGFKAVEYLFPYAYKSREIAARLRAHGLQQVLFNAPPGDWDAGERGLACLPGREAEFRAGIGKALDYAAALDCPRVHVMAGLLPAGSERATLRPTYVSQLRWAALEAAKQGVDVLIEPINTRDIPGFYLNRQDDAHALLAEVGEPNLKVQMDLYHCQIVEGDLAMKMRQYLPSGNVGHVQIAGVPQRHEPDLGELNYPYLFSVLDELGYTGWVGCEYRPQAGMKPGGTSAGLGWLKPYL
SIO_010081: RFER_RS02210
subclass of: SO_0000673
so part of: RFER_RS02210
location: complement(449277..450074)
location: region:449277-450074:-1
so has part: feature:449277-450074:-1:exon

WP_011462768.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:449277-450074:-1:exon

RFER_RS02215
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02215
old locus tag: Rfer_0444
so part of: sequence
location: complement(450080..450754)
location: region:450080-450754:-1
so has part: feature:450080-450754:-1:exon
subclass of: SO_0000010

position:450080:-1
position: 450080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450754:-1
position: 450754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450080-450754:-1:exon

RFER_RS02215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02215
old locus tag: Rfer_0444
EC number: 4.1.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020228345.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aldolase
translation: MNENEAREEICRVGRSLFERGYVHATAGNISVRLDESEGGGFLITPTDACLGFLDPARLARLDAQAQQLSGDKASKTIALHSHIYRATAQFDPNTRCVIHTHSTHCVALTLQPGNKELLPAVTPYFVMKVGHVPVIAYHRPGAPEAAQLVAQAISRYGQAGTPIRAVMLERLGPNVWHDSPAAAMATLEELEETARLGSLSALAPEPLTESQIDELRQTFGARW
SIO_010081: RFER_RS02215
subclass of: SO_0000673
so part of: RFER_RS02215
location: complement(450080..450754)
location: region:450080-450754:-1
so has part: feature:450080-450754:-1:exon

WP_011462769.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:450080-450754:-1:exon

RFER_RS02220
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02220
old locus tag: Rfer_0445
so part of: sequence
location: complement(450751..452022)
location: region:450751-452022:-1
so has part: feature:450751-452022:-1:exon
subclass of: SO_0000010

position:450751:-1
position: 450751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:452022:-1
position: 452022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450751-452022:-1:exon

RFER_RS02220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02220
old locus tag: Rfer_0445
EC number: 2.7.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013518946.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: four-carbon acid sugar kinase family protein
translation: MKKILLGCIADDFTGATDLANNLVRAGLRVVQAMGVPAQPLDADADAVVVALKSRTLPVDEAIAQSLAALRWLQAQGAQQIYFKYCSTFDSTAQGNIGPVAEALMDALGTDFTIATPAFPDNQRTVFKGHLFVGDVLLNESGMQNHPLTPMTDANLVRVLQGQCRRPVGLIDYKVVAQGEAAIRTRIDQLRAQGVGLAVVDAISNDDLLRLGAALSDMPLVTGGSGVAIGLPANFGIAPSSTASALPRATGLQAVVSGSCSLATNRQVLAFIQAGRPALGIDALQIAAGVDVTTQALAWAAPLLSQGPVLIYSTADANAVKAVQAQLGVEEAGAMVERTLAAIALGLVALGVRQLVVAGGETSGACVQALNITQMKIGPQIDPGVPWCHAQADAAPGAGLHLTLKSGNFGADDFFSKAFALLA
SIO_010081: RFER_RS02220
subclass of: SO_0000673
so part of: RFER_RS02220
location: complement(450751..452022)
location: region:450751-452022:-1
so has part: feature:450751-452022:-1:exon

WP_011462770.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:450751-452022:-1:exon

RFER_RS02225
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02225
old locus tag: Rfer_0446
so part of: sequence
location: complement(452019..452909)
location: region:452019-452909:-1
so has part: feature:452019-452909:-1:exon
subclass of: SO_0000010

position:452019:-1
position: 452019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:452909:-1
position: 452909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452019-452909:-1:exon

RFER_RS02225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02225
old locus tag: Rfer_0446
EC number: 1.1.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018903536.1
GO function: GO:0051287 - NAD binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)-dependent oxidoreductase
translation: MTTNVGVIGLGAMGSGMARSLRRRGSQVHVFDVRAEAAQAFAADGGVACASAAELAAQCSVIVSVVVNAAQTESVLFGEGGCAAAMKRGSVFVMCSTVDPNWSIALEARLAALGIFYIDAPISGGAAKAASGEMTMMTAGKPEAYAAVGPLLDAMAAKVYRLGEQAGAGSKVKIINQLLAGVHIAAAAEAMALGLREGVDAKALYEVITHSAGNSWMFENRMAHVLSGDYTPLSAVDIFVKDLGLVLDVARASKFPLPLSSTAHQMFMQASTAGFAREDDSAVIKIFPGIELPKKS
SIO_010081: RFER_RS02225
subclass of: SO_0000673
so part of: RFER_RS02225
location: complement(452019..452909)
location: region:452019-452909:-1
so has part: feature:452019-452909:-1:exon

WP_011462771.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:452019-452909:-1:exon

RFER_RS02230
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02230
old locus tag: Rfer_0447
so part of: sequence
location: complement(453032..453808)
location: region:453032-453808:-1
so has part: feature:453032-453808:-1:exon
subclass of: SO_0000010

position:453032:-1
position: 453032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:453808:-1
position: 453808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453032-453808:-1:exon

RFER_RS02230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02230
old locus tag: Rfer_0447
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015867887.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FadR/GntR family transcriptional regulator
translation: MTAQFKPITPGAYLSDQVADALAAEIRAGRLAVGAKLPTEAALVEQFAVSRTVVREAVSRLKSLGLVDSRQGSGVYVKEVGFSPLNFDAKSTVSRQAVIQMVEVRRALEAEVAGLAAQRRTQADIKRIGKSIALLDKAVQAGGDGVDEDVQYHRAIAEAARNPFLIGTLEYLGQFLRGATRVTRANEARRADFARQVSAEHDKILRAIEAGDAAAARKAAARHMDNAILRIEQADPAFWQQAGVQLARPLVFGLPPRS
SIO_010081: RFER_RS02230
subclass of: SO_0000673
so part of: RFER_RS02230
location: complement(453032..453808)
location: region:453032-453808:-1
so has part: feature:453032-453808:-1:exon

WP_041790045.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:453032-453808:-1:exon

RFER_RS02235
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02235
old locus tag: Rfer_0448
so part of: sequence
location: complement(453878..455155)
location: region:453878-455155:-1
so has part: feature:453878-455155:-1:exon
subclass of: SO_0000010

position:453878:-1
position: 453878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455155:-1
position: 455155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453878-455155:-1:exon

RFER_RS02235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02235
old locus tag: Rfer_0448
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011462773.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]; GO:0031317 - tripartite ATP-independent periplasmic transporter complex [Evidence IEA]
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0008643 - carbohydrate transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TRAP transporter large permease
translation: MTAVMLSTMVLCFALTISVAVSIGLASILGIQASNAHMLISVKEMFNAINKFPLAAIPFFILAGNIMETGGISRRLVDFAKSLVGGVQGGLPMTCVLTCMIFASVSGSSVATTFAIGTILIPALIKHGYPTTWAAALQATSAELGVIIPPSIPMILYGVSAEVSIGELFIAGFGPGFFISGALMLFVWGYCKYKGWGKNDGDGRLSVGKATWKAGWALLMPVIILGGIYGGIFTPTEASAVAVFYALMVGLVIYREIKFPDLYNILRKSVLSSAVIMFIIANAGLFAFLITRAGVPEAIGLWLQDVLKTPAYFLLGVNAALFVIGMFIETGAAIIVLAPILAPVAIHFGIDPVHFGLVMVVNLALGMITPPFGVNLFAACTVARISLDRMIKDLIPFVLVVLACLMVISYVPALSLGLRDLVYAR
SIO_010081: RFER_RS02235
subclass of: SO_0000673
so part of: RFER_RS02235
location: complement(453878..455155)
location: region:453878-455155:-1
so has part: feature:453878-455155:-1:exon

WP_011462773.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:453878-455155:-1:exon

RFER_RS02240
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02240
old locus tag: Rfer_0449
so part of: sequence
location: complement(455152..455646)
location: region:455152-455646:-1
so has part: feature:455152-455646:-1:exon
subclass of: SO_0000010

position:455152:-1
position: 455152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455646:-1
position: 455646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:455152-455646:-1:exon

RFER_RS02240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02240
old locus tag: Rfer_0449
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005794685.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TRAP transporter small permease
translation: MKENFLRLERWTSGLSLYTACAMLMLAASLAMFQIVTRFVLEIPAEWTEVLIRFSLIWMVFLGIPTAFRQGAMVSVDVLYRWSPPRIRRLLDWIVCLAAAGLICIIIWWGWDYAVRGRVQSMAGLESLSMFWAYLAMPVGGVFSLIGIFGNLLDTQRLELETAV
SIO_010081: RFER_RS02240
subclass of: SO_0000673
so part of: RFER_RS02240
location: complement(455152..455646)
location: region:455152-455646:-1
so has part: feature:455152-455646:-1:exon

WP_011462774.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:455152-455646:-1:exon

RFER_RS02245
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02245
old locus tag: Rfer_0450
so part of: sequence
location: complement(455735..456706)
location: region:455735-456706:-1
so has part: feature:455735-456706:-1:exon
subclass of: SO_0000010

position:455735:-1
position: 455735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456706:-1
position: 456706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:455735-456706:-1:exon

RFER_RS02245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02245
old locus tag: Rfer_0450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020230282.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TRAP transporter substrate-binding protein
translation: MKLRKLVIGLSLALGLAATAAAQTVMKINIAIAQNSHQGIAIDTFAKEVGTQTNGRYKIETFYNASLGSERESIEAVQLGTQELTFTSTGPVPNFVPEAKILDVPFLFRDKAHARAVLDGPIGQDMLAKFDSKGFKALAWGENGMRNMTNSKHTIKTPDDLKGLKIRTMENPVHVAAYKGLGIVTTPMAMAEVFTALQQGTVDGQENPLSVIMAAKLDQVQKYVSLTGHVYSPAIFLMNKAAFDKLSPADQKVFLEAAKVAVKANRARVDADDAMGVTYLRGKGMEVTESLDKSKFVAKLAPVYADFEKQFGKANMDKIRNYK
SIO_010081: RFER_RS02245
subclass of: SO_0000673
so part of: RFER_RS02245
location: complement(455735..456706)
location: region:455735-456706:-1
so has part: feature:455735-456706:-1:exon

WP_011462775.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:455735-456706:-1:exon

RFER_RS02250
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02250
old locus tag: Rfer_0451
so part of: sequence
location: complement(456764..457819)
location: region:456764-457819:-1
so has part: feature:456764-457819:-1:exon
subclass of: SO_0000010

position:456764:-1
position: 456764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457819:-1
position: 457819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456764-457819:-1:exon

RFER_RS02250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02250
old locus tag: Rfer_0451
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013903146.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD-dependent epimerase/dehydratase family protein
translation: MLKPSAQATGPCHIVITGGAGFLGVRLARTLLAQGQLSLAGAAPVEIARITLVDRAAPPNDLMADARVSALTGDLNELLEDKSAAAPVVAKDTAIVFHLAAAVSGECEANFDLGMRSNFAATLALLGACRALQTKPILVFASSLAVFGDTPEQPLPSAIEDNTLPTPQSSYGIQKFIGEQLVADYTRKGFVQGRSVRLMTVSVRPGTPNGAASSFLSGMLREPLAGVRATCPVPADTPVALSSPARTIQGLIRAAEASDQAWGPRTALTLPALTTTPGEMAAALERVAGTAATALIDWTPDPAICNIVKTWPARIHAVRASGLGLLPEDSFDDIIREYIRENTYAIKLPVR
SIO_010081: RFER_RS02250
subclass of: SO_0000673
so part of: RFER_RS02250
location: complement(456764..457819)
location: region:456764-457819:-1
so has part: feature:456764-457819:-1:exon

WP_011462776.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:456764-457819:-1:exon

RFER_RS02255
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02255
old locus tag: Rfer_0452
so part of: sequence
location: complement(457845..459281)
location: region:457845-459281:-1
so has part: feature:457845-459281:-1:exon
subclass of: SO_0000010

position:457845:-1
position: 457845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459281:-1
position: 459281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:457845-459281:-1:exon

RFER_RS02255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02255
old locus tag: Rfer_0452
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019655834.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aldehyde dehydrogenase family protein
translation: MQKHDNLINGQWVVGAHYAPNINPSNIADVIGDYTQADAAQLDAAVKAAQAALPAWSTGNIQARADALDKIGTEILARREELGTLLAREEGKTLPEGIGEVSRAGNIFKFFAGECLRLSGEIVPSVRSGVSVEITREPVGVIGLITPWNFPIAIPAWKTAPALAYGNCVVLKPADLVPGCAWALAEIISRSGIPAGVFNLVMGRGSVIGDPLVNHPGINAISFTGSQGVGNRIAQQCAANLKKVQLEMGGKNPQVILDDADLAQAVELSVQSAFFSTGQRCTAASRLIVTDGIYPKFLGAMKQRMAGLKIGDALGAGIDIGPVSSRAQLEQDLSYVEIGKAEGGLLVAGGERLKLSAEGFYLAPALLTDTTAAMRINREEVFGPVASIIRVKGYEEALREANNTPYGLSSGIATTSLKYASHFKRHSQAGMVMVNLPTAGVDYHVPFGGRKGSSYGSREQGRYAQEFFTTVKTTYIAS
SIO_010081: RFER_RS02255
subclass of: SO_0000673
so part of: RFER_RS02255
location: complement(457845..459281)
location: region:457845-459281:-1
so has part: feature:457845-459281:-1:exon

WP_041791287.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:457845-459281:-1:exon

RFER_RS02260
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02260
old locus tag: Rfer_0453
so part of: sequence
location: complement(459314..460243)
location: region:459314-460243:-1
so has part: feature:459314-460243:-1:exon
subclass of: SO_0000010

position:459314:-1
position: 459314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460243:-1
position: 460243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:459314-460243:-1:exon

RFER_RS02260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02260
old locus tag: Rfer_0453
EC number: 4.1.3.3
EC number: 4.2.1.41
EC number: 4.3.3.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011463337.1
GO process: GO:0009436 - glyoxylate catabolic process [Evidence IEA]; GO:0071704 - organic substance metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dihydrodipicolinate synthase family protein
translation: MTQTNQARFKGVFPVVPTTFFENGELDLASQKRCVDFMIDAGSNGLCLLANFSEQFLLSDDERDVLTRTMLEHVAGRVPVIVTTTHFSTQVCAQRSRRAEDLGAAMVMVMPPYHGATFRVSEERIYEFYAGLSDAIDIPIMIQDAPASGTVLSAAFLARMATEIKQVAYFKIETAGAASKLRELIRLGGAAIEGPWDGEEAITLLPDLDAGATGAMTGGAYPDGIRLIVDAYCAGRREEAIAHYQQWLPLINYENRQGGILSAKALMKEGGVIACEAPRHPWPSMHPAVRAGLIETAQRLNPMVLRWGK
SIO_010081: RFER_RS02260
subclass of: SO_0000673
so part of: RFER_RS02260
location: complement(459314..460243)
location: region:459314-460243:-1
so has part: feature:459314-460243:-1:exon

WP_011462778.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:459314-460243:-1:exon

RFER_RS02265
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: dmpG
locus tag: RFER_RS02265
old locus tag: Rfer_0454
so part of: sequence
location: complement(460260..461288)
location: region:460260-461288:-1
so has part: feature:460260-461288:-1:exon
subclass of: SO_0000010

position:460260:-1
position: 460260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461288:-1
position: 461288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460260-461288:-1:exon

RFER_RS02265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: dmpG
locus tag: RFER_RS02265
old locus tag: Rfer_0454
EC number: 4.1.3.39
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011462779.1
GO function: GO:0008701 - 4-hydroxy-2-oxovalerate aldolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4-hydroxy-2-oxovalerate aldolase
translation: MTVKGKRITVHDMTLRDGMHPKRHQMTLDQMKAVATGLDAAGVPLIEVTHGDGLGGASVNYGFPAHTDEEYLGTVIPLLKLAKVSALLIPGIGTVDHLRMAKDLGVHTIRVATHCTEADVSEQHISLARQLEMDTVGFLMMAHKADSQRLISQARLMESYGANCIYITDSAGYMLPAEVKEKTSAVRAALRPETELGFHGHHNLAMGVANSVVAVESGATRIDAAAAGLGAGAGNTPMEVFIAVCNRMGIATGVDLFKMQDVAEDIVVPMMDHPIRIDRDALILGYAGVYSSFLLFAKRAEKKYGVSAREILIELGRRGMVGGQEDMIEDAAMTMAKARGPI
SIO_010081: RFER_RS02265
subclass of: SO_0000673
so part of: RFER_RS02265
location: complement(460260..461288)
location: region:460260-461288:-1
so has part: feature:460260-461288:-1:exon

WP_011462779.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:460260-461288:-1:exon

RFER_RS02270
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02270
old locus tag: Rfer_0455
so part of: sequence
location: complement(461303..462223)
location: region:461303-462223:-1
so has part: feature:461303-462223:-1:exon
subclass of: SO_0000010

position:461303:-1
position: 461303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462223:-1
position: 462223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:461303-462223:-1:exon

RFER_RS02270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02270
old locus tag: Rfer_0455
EC number: 1.2.1.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011462780.1
GO function: GO:0008774 - acetaldehyde dehydrogenase (acetylating) activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetaldehyde dehydrogenase (acetylating)
translation: MSKKIKCALIGPGNIGTDLLYKLRRSPVLDPVWMVGVDPTSEGLKRARELGLKTTEQGVDGLLPHVLADGVQIAFDATSAYVHAENSRRLTELGVLVIDLTPAAIGPFCVPPVNLLALVGRRVMNVNMVTCGGQATIPMIAAISRVQPVRYGEIVATISSKSAGPGTRKNIDEFTRTTSRAIEQVGGAAKGKAIIIINPAEPPLVMRDTVHCLTETEPDQAKITASIHAMIKEVQKYVPGYKLVNGPVFDDKRVSVFLEVEGLGDFLPKYSGNLDIMTAAAARTAEMFAEEILAGRINLQPMATVA
SIO_010081: RFER_RS02270
subclass of: SO_0000673
so part of: RFER_RS02270
location: complement(461303..462223)
location: region:461303-462223:-1
so has part: feature:461303-462223:-1:exon

WP_011462780.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:461303-462223:-1:exon

RFER_RS02275
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02275
old locus tag: Rfer_0456
so part of: sequence
location: complement(462257..463996)
location: region:462257-463996:-1
so has part: feature:462257-463996:-1:exon
subclass of: SO_0000010

position:462257:-1
position: 462257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:463996:-1
position: 463996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:462257-463996:-1:exon

RFER_RS02275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02275
old locus tag: Rfer_0456
EC number: 4.2.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007876790.1
GO function: GO:0016836 - hydro-lyase activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IlvD/Edd family dehydratase
translation: MSTPPKRVLRSAAWFGAADKNGFMYRSWMKNQGIPDHEFQGKPIIGICNTWSELTPCNAHFRKIAEHVKRGISEAGGFPVEFPVFSNGESNLRPTAMLTRNLASMDVEESIRGNPMDAVVLLVGCDKTTPALLMGAASCDIPTIVVTGGPMLNGKHEGRDIGSGTVVWQLHEAVKAGKISLNEFMSAEAGMSRSAGTCNTMGTASTMACMAEALGTSLPHNAAIPAVDARRYVLAHMSGMRIVDMVWEDLKLSKILTREAFENAIRVNAAVGGSTNAAIHLKAIAARIGVPLELDDWTTVGKGTPTLVDLQPSGRFLMEDFYYAGGLPAVLRRMGEGGLLPHKDALTVNGKSIWENVLDAPIHNPEVIRPLDKPLVADGSICVLRGNLAPRGAVLKPSAATPALMKHRGKAVVFEDIDHYKARIGDPDLEIDADSVMVLKNCGPKGYPGMAEVGNMGLPPKLLAQGITDMVRISDARMSGTAYGTVVLHVAPEAAAGGPLAIVRDGDWIALDSYAGKLDLEISEAEIAQRQAELQAKPAAPAKGGYQQLYIDRVLQADEGCDFDFLVGCRGAEVPRHSH
SIO_010081: RFER_RS02275
subclass of: SO_0000673
so part of: RFER_RS02275
location: complement(462257..463996)
location: region:462257-463996:-1
so has part: feature:462257-463996:-1:exon

WP_011462781.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:462257-463996:-1:exon

RFER_RS02280
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02280
old locus tag: Rfer_0457
so part of: sequence
location: 464159..465106
location: region:464159-465106:1
so has part: feature:464159-465106:1:exon
subclass of: SO_0000010

position:464159:1
position: 464159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465106:1
position: 465106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464159-465106:1:exon

RFER_RS02280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02280
old locus tag: Rfer_0457
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017451257.1
GO function: GO:0001216 - DNA-binding transcription activator activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MNDHDPDAARRTRTKLKTRQMFLLLALDEARNLHQAAKETNMSQPAASKMLKDIEELFGVPFFDRLPRGVRPTLYGETMIRHVRMALTNLSQGQDSIATLQAGLSGQVDIGVIITPSTTLVPQAIARTKQEAPRLCIGVEVGTSNELVERLKRGQLDFLIARIREQEDDLDLLYEDLSEETECAVARVGHPLLARSDLGLNDLAAAGWILSPRGSILRHRFDMMFRRIELETPANVVEATAISVITSLLQQTDFLHVMPLEVARYYVRCSELAILPIELPCKMDSFGVIARRDQLLSPGAKLLLQHLRTIAAEIY
SIO_010081: RFER_RS02280
subclass of: SO_0000673
so part of: RFER_RS02280
location: 464159..465106
location: region:464159-465106:1
so has part: feature:464159-465106:1:exon

WP_041791289.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:464159-465106:1:exon

RFER_RS02285
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02285
old locus tag: Rfer_0458
so part of: sequence
location: complement(465204..468287)
location: region:465204-468287:-1
so has part: feature:465204-468287:-1:exon
subclass of: SO_0000010

position:465204:-1
position: 465204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:468287:-1
position: 468287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465204-468287:-1:exon

RFER_RS02285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02285
old locus tag: Rfer_0458
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010100040.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EAL domain-containing protein
translation: MPILAKPMRPALVGIVVFLLAGLVAGGLVYRSEQHRRQLAQSRALAMAADHAQSLQQNLQQALGPAQFEQVVARGYDYVLWRIDPASQQRQIIAQSAKVPLDAVDFELKVPNAKWTLSVAPTTGWADPQGLSLKVALAALFSVLLAYSAKQAGAARVRANELQVDVNAQAVELVALNQRLQSTLDALPDLLFETDMDGRYLAYHSPRSELLGKTLHRVLPVAVADICLAAVHEANAVGYSHGKQIQLALPDGAHWFELSASRKPGLPGDAPTFIVLSRDITERKKAEIKIERLTKLYAALSQCNQAIVRCSDASELFPIICRDAVNFGGMKMAWIGMLDEADQLIKPAASFGSGVEYLEGIEISVDLSGDKGRGPTGTSIREDRPFWCQDFQHDDATAAWHERGERFGWGASASLPLHLKDRVIGAFTLYAGEACAFDEAAQNLLLEMALDISFALDRFADERERKIMQDDLRDSEERYRKAFQTSPDAVNITRLVDGLYVDVNTGFERITGWRHDEVVGKTATELNLWGNPADRMRLVDALQSEGRCNNLEATFVKKNGDIFHGLMSAEKVRFKDVDCILSITRDITEKKLAEAQIQQLAHFDQLTGLPNRSQLHDRFRYALSLAQRHGDQLAIMFLDLDHFKNINDTLGHSVGDQLLVDVSRRLKAALREEDSLSRLGGDEFILLLPGTDEAQASQVATKLLAAVAQPCQIEQNELVSTVSIGIALYPNDGQDFETLSKNADAAMYRVKQASRNDFRFFTQEMQTHSARTLQLVNALRHALPRHEFELHFQPQVALQDGHIVGAEALLRWRHPELGMISPAEFIPIAEDSGQILAIGEWVLRTAVRQLKQWLDAGLRPMVIAVNLSAVQFRHPNLMALVTRILDEAALPPEFLELELTEAAAMDDPPAAIAIMNKLDEHGIRMSIDDFGTGYSSLSYLKKFKVNKLKIDQSFVRDISDDPDDKAIVTAIINLASSLGMHTIAEGVETASQLAFLRLQGCDEVQGYYVSKPLPKDQFEAFVRNSIS
SIO_010081: RFER_RS02285
subclass of: SO_0000673
so part of: RFER_RS02285
location: complement(465204..468287)
location: region:465204-468287:-1
so has part: feature:465204-468287:-1:exon

WP_244095785.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:465204-468287:-1:exon

RFER_RS02290
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: recQ
locus tag: RFER_RS02290
old locus tag: Rfer_0459
so part of: sequence
location: complement(468409..470265)
location: region:468409-470265:-1
so has part: feature:468409-470265:-1:exon
subclass of: SO_0000010

position:468409:-1
position: 468409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:470265:-1
position: 470265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:468409-470265:-1:exon

RFER_RS02290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: recQ
locus tag: RFER_RS02290
old locus tag: Rfer_0459
EC number: 3.6.4.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005797478.1
GO function: GO:0003678 - DNA helicase activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA helicase RecQ
translation: MILSIHLILQEVFGYDAFRGPQQAIIEHVVAGGDALVLMPTGGGKSLCYQIPAIAREQAGQGITVVISPLIALMHDQVGALHEAGIKAEFLNSTLSGEQATQVERRLLRGDITLLYAAPERVTTPRFLAQLDSLYERGKLSLFAIDEAHCVSQWGHDFRPEYRALTVLHERYGSVPRIALTATADALTRADIVERLQLQDARLFISSFDRPNISYTIVEKRDATQQLLRFITSEHMGDAGIVYCQSRKRVEDIANLLCDEGIAALPYHAGLEAKVRQANQDQFLRSEGIVMVATIAFGMGIDKPDVRFVAHLDMPKNIEGYYQETGRAGRDGQAAQAWMCYGLQDVVNQRRMIDESPAGEEFKQGLRGKLDALLGLAEATDCRRVRLLHYFDEESKACGNCDNCLHPPAVWDGTDAARKLLSTIYRVQQMGGSYGAVHIMDILRGKSTEKVTQRGHETLSTFGIGADLSEVQLRGVLRQLIAIGAVAVDAQAFNTLQLTDASRAVLRGEVPVQLRASVSSPAERKAKRSSAVHAGSVGKTPIALDAAAQTRYTALKAWRGEVAKEHNLPAYVIFHDATLAAIAERAPLSLDDLQGISGIGAKKLEAYGEEVLRVMVSV
SIO_010081: RFER_RS02290
subclass of: SO_0000673
so part of: RFER_RS02290
location: complement(468409..470265)
location: region:468409-470265:-1
so has part: feature:468409-470265:-1:exon

WP_011462784.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:468409-470265:-1:exon

RFER_RS02295
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02295
old locus tag: Rfer_0460
so part of: sequence
location: 470422..471468
location: region:470422-471468:1
so has part: feature:470422-471468:1:exon
subclass of: SO_0000010

position:470422:1
position: 470422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:471468:1
position: 471468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:470422-471468:1:exon

RFER_RS02295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02295
old locus tag: Rfer_0460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019701031.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: homocysteine S-methyltransferase family protein
translation: MKALHYTRGQKLPEILQHRIMVLDGAMGTMIQRFKLGEAQYRGERFKDFHKDVKGNNELLSLTRPDVITDIHERYLAAGADMIETNTFGATRVAQADYDMADLAFEMNLASAKLARAACDKFSTPDKPRFVLGALGPTPKTASISPDVNDPGARNVTFEQLRAAYYEQVEALVQGGADALLVETIFDTLNAKAALFAIDEFFEASGQQLPIIISGTVTDASGRILSGQTVTAFWHSVRHAQPLAVGLNCALGAALMRPYIQELAKAAPDTFISCYPNAGLPNPMSDTGFDETPADTSRLIGEFAAEGLVNIVGGCCGTTPEHIGAIHDKVAPLAGRVLQRNVFYPEAA
SIO_010081: RFER_RS02295
subclass of: SO_0000673
so part of: RFER_RS02295
location: 470422..471468
location: region:470422-471468:1
so has part: feature:470422-471468:1:exon

WP_011462785.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:470422-471468:1:exon

RFER_RS02300
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02300
old locus tag: Rfer_0461
so part of: sequence
location: 471491..472396
location: region:471491-472396:1
so has part: feature:471491-472396:1:exon
subclass of: SO_0000010

position:471491:1
position: 471491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472396:1
position: 472396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471491-472396:1:exon

RFER_RS02300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02300
old locus tag: Rfer_0461
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020227405.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminotransferase class IV
translation: MPAPDLSKGVAFVRGQYVPIGEASIPITDWGFLRSDATYDVVTVWDGSFFRLDAHLERFMRSCQRWRLDPGLTPGQITGVLSQCVRLSGLRASYVEMICTRGQPPWGSRDPRLAVNQFYAFAVPYVWLANAQQREAGLHLMISDVQRIPATSVDPSAKNYHWNDLTMGLLGALDAGADSVVLVDSVGNVVEGPGFNVFCVSHGALVTPSEGMLEGVSRRTVIEMARALGLETQLRALPADELRGAEEVFISTSGGGVLPVSRVDKRPVGDGRPGPITQRLVQTYWAWHADPVYSQPIDYSL
SIO_010081: RFER_RS02300
subclass of: SO_0000673
so part of: RFER_RS02300
location: 471491..472396
location: region:471491-472396:1
so has part: feature:471491-472396:1:exon

WP_011462786.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:471491-472396:1:exon

RFER_RS23875
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS23875
so part of: sequence
location: complement(472458..472595)
location: region:472458-472595:-1
so has part: feature:472458-472595:-1:exon
subclass of: SO_0000010

position:472458:-1
position: 472458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:472595:-1
position: 472595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472458-472595:-1:exon

RFER_RS23875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS23875
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSTLHFPKSFEHFSGSIKKTDPAAWVVLALAIASLAVLYAVIYFR
SIO_010081: RFER_RS23875
subclass of: SO_0000673
so part of: RFER_RS23875
location: complement(472458..472595)
location: region:472458-472595:-1
so has part: feature:472458-472595:-1:exon

WP_166485637.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:472458-472595:-1:exon

RFER_RS02305
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02305
old locus tag: Rfer_0462
so part of: sequence
location: 472859..473620
location: region:472859-473620:1
so has part: feature:472859-473620:1:exon
subclass of: SO_0000010

position:472859:1
position: 472859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473620:1
position: 473620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472859-473620:1:exon

RFER_RS02305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02305
old locus tag: Rfer_0462
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013722703.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metalloregulator ArsR/SmtB family transcription factor
translation: MNQRTLKDLLYEQVARIGKAVSSPKRLELLELLAQGEKTVDVMATELSADIKLISAHLKALRDARLVTSRRDGKYVVYRLTGGDVAGLLVTLREVAEEHLLELRLALDQMVADPARLASVGREALLEQARRGDVVVIDVRPLAEYEAAHLPFARSMPMAEIEKRLAELPFDKDIVAYCRGPFCLLSDEAVVLLAAKGYRVRKILDGVSEWQAAGLPVQASAGEPSQPRTGITPQEPVRKNFNPLQSTIKPGGQ
SIO_010081: RFER_RS02305
subclass of: SO_0000673
so part of: RFER_RS02305
location: 472859..473620
location: region:472859-473620:1
so has part: feature:472859-473620:1:exon

WP_011462787.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:472859-473620:1:exon

RFER_RS02310
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02310
old locus tag: Rfer_0463
so part of: sequence
location: 473622..473975
location: region:473622-473975:1
so has part: feature:473622-473975:1:exon
subclass of: SO_0000010

position:473622:1
position: 473622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473975:1
position: 473975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473622-473975:1:exon

RFER_RS02310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02310
old locus tag: Rfer_0463
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018912542.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DsrE family protein
translation: MVKYLFILNDPPYGTERSYNGLRLARSLLKAGDAEVKLFLIGDAAACAKAGQKVPQGYYNLGDMLGMIERAGGAIGVCGSCIDARGISETDLVKGASRSSMDELAAWTQWSDKVLVF
SIO_010081: RFER_RS02310
subclass of: SO_0000673
so part of: RFER_RS02310
location: 473622..473975
location: region:473622-473975:1
so has part: feature:473622-473975:1:exon

WP_011462788.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:473622-473975:1:exon

RFER_RS23880
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS23880
old locus tag: Rfer_0464
so part of: sequence
location: 473986..474159
location: region:473986-474159:1
so has part: feature:473986-474159:1:exon
subclass of: SO_0000010

position:473986:1
position: 473986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474159:1
position: 474159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473986-474159:1:exon

RFER_RS23880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS23880
old locus tag: Rfer_0464
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTRTALIPGAGQMNQLIYLDYNATTPVAPEVLEATLPFLRVHFGNPSSARPFGRISA
SIO_010081: RFER_RS23880
subclass of: SO_0000673
so part of: RFER_RS23880
location: 473986..474159
location: region:473986-474159:1
so has part: feature:473986-474159:1:exon

WP_244095786.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:473986-474159:1:exon

RFER_RS24425
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS24425
old locus tag: Rfer_0465
so part of: sequence
location: 474592..475233
location: region:474592-475233:1
so has part: feature:474592-475233:1:exon
subclass of: SO_0000010

position:474592:1
position: 474592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475233:1
position: 475233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:474592-475233:1:exon

RFER_RS24425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS24425
old locus tag: Rfer_0465
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013721423.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PEP-CTERM sorting domain-containing protein
translation: MKLNFARCTFAHSMKTMGCVAALFLGLLGVAPSSSATVLTATDASWKVTAGDLGPSGWNGNAIFNDSGWASATELSPWPGYVAKVIWSGGGQFSQSETQIWARGIFNLSALPLSAVLNNGFDDDGDIYVNGNLVVSDHNGFANNSFADITSHLVIGDNLIAFTAIDNYLQWGYNHGAAVQVDATFAQVPEPMSLALLGLGLAGLAFVRRRAKI
SIO_010081: RFER_RS24425
subclass of: SO_0000673
so part of: RFER_RS24425
location: 474592..475233
location: region:474592-475233:1
so has part: feature:474592-475233:1:exon

WP_011462790.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:474592-475233:1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 338969
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF01057
inference: COORDINATES: profile:INFERNAL:1.1.4
note: S-adenosyl-L-homocysteine riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: S-adenosyl-L-homocysteine
so part of: sequence
location: 475493..475563
location: region:475493-475563:1
so has part: feature:475493-475563:1:region

position:475493:1
position: 475493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475563:1
position: 475563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:475493-475563:1:region

RFER_RS02320
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02320
old locus tag: Rfer_0466
so part of: sequence
location: 475587..478484
location: region:475587-478484:1
so has part: feature:475587-478484:1:exon
subclass of: SO_0000010

position:475587:1
position: 475587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478484:1
position: 478484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:475587-478484:1:exon

RFER_RS02320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02320
old locus tag: Rfer_0466
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010466818.1
GO function: GO:0008705 - methionine synthase activity [Evidence IEA]
GO process: GO:0009086 - methionine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: vitamin B12 dependent-methionine synthase activation domain-containing protein
translation: MSEIIAPSMKLSGLEPLTIGLALSADAPSPSAGDRAEDLSPIASFVNIGERTNVTGSKAFARMILNGEFDQALSVARQQVENGAQIIDINMDEAMLDSQAAMVKFLNLIASEPDISRVPVMIDSSKWSVIEAGLRCVQGKPVVNSISMKEGVDAFKHQAKLLRRYGAAAVVMAFDEQGQADTYERKIGICERAYRILVDEVGFPPEDIIFDPNIFAIATGIEEHNNYAVDFINATRWIKQHLPGAKVSGGVSNVSFSFRGNDPVREAIHTVFLYHAIKAGMDMGIVNAGMVGVYDDLEPELRERVEDVVLNRRPDAGERLVEIAETAKSGAKDESKKLEWRGTPEHPVSVEQRLSHAMVHGITDFIVPDTEEAYQAILAKGGRPLHVIEGPLMAGMSIVGDLFGQGKMFLPQVVKSARVMKQAVAHLIPYIEEEKRLDEAAGRDVATKGKIIIATVKGDVHDIGKNIVTVVLQCNNFDVVNMGVMVPCHEILARAKVEGADIIGLSGLITPSLEEMAYVAGEMQKDDYFRIKKIPLLIGGATTSRVHTAVKVAPHYAGPVVYVPDASRSVGVVQNLLGDAASGFVAELNTDYERVRQQHANKKQIPLWPLAKARANKTPVDWSAYQPTTPKFIGRRVFKNFDLGELAGFIDWGPFFQTWDLAGPFPAILDDEVVGVEAKKIYADGQAMLKKIIEGRWLTANGVLGLYPANTVNDDDIELYTDETRSTVAMTWYGLRQQAAKEEIDGVMRPSRCLADFVAPKIATENIASDAMKTGATGQKGLNKPGNAETVIPAQASIRDYIGVFAVTAGIGIEKKEAQFLAAHDDYSAILLKSLADRLAEAFAECLHKKVRTDLWGYAPDEALPAKDLIAEKYQGIRPAPGYPACPDHSVKKDMFELLQCGDIGMGVTESLAMTPAASVSGFYIGHPDSTYFSVGKIGDDQLKDLAMRRGMDEKALQRLLAPNL
SIO_010081: RFER_RS02320
subclass of: SO_0000673
so part of: RFER_RS02320
location: 475587..478484
location: region:475587-478484:1
so has part: feature:475587-478484:1:exon

WP_011462791.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:475587-478484:1:exon

RFER_RS02325
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02325
old locus tag: Rfer_0467
so part of: sequence
location: complement(478488..479699)
location: region:478488-479699:-1
so has part: feature:478488-479699:-1:exon
subclass of: SO_0000010

position:478488:-1
position: 478488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:479699:-1
position: 479699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:478488-479699:-1:exon

RFER_RS02325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02325
old locus tag: Rfer_0467
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019430028.1
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MQAPPPINLRLVGWLSLAQLISWGSIFYTFALVMAPVERDLGLSRAESSLAFSLALLVEGLLAYPVGRWIDRGHERIVMTGGSVLAGVCLLLQGSVTGMVGFYAVWAGLGAAMAAVLYAPAFAVVTRRFPLDFRRAIILMTFLGGLASTVFIPLTAWLMALWGWRHAFIALAALHLLVCAPLHALALRGAPRPSPRVAAADPQTVKGVTDFIFSAPFLLIGVFVVLLMAVTVALPAHMVSLLRENGLREVWVIAIPAGIGVIQVLGRLLLYFFEHHVDPHLANRLIPCLIPLGLLALLAAPLSADGQVGAVLLFVLLYGLGNGMLTIVKGTAIAQYVNRDHVATLNGALGLPLALARAAAPLLLGLLWTAQAGYTHGLWLLLALSVLGVGALMLAQQLALRSR
SIO_010081: RFER_RS02325
subclass of: SO_0000673
so part of: RFER_RS02325
location: complement(478488..479699)
location: region:478488-479699:-1
so has part: feature:478488-479699:-1:exon

WP_011462792.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:478488-479699:-1:exon

RFER_RS02330
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02330
old locus tag: Rfer_0468
so part of: sequence
location: complement(479815..480579)
location: region:479815-480579:-1
so has part: feature:479815-480579:-1:exon
subclass of: SO_0000010

position:479815:-1
position: 479815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:480579:-1
position: 480579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:479815-480579:-1:exon

RFER_RS02330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02330
old locus tag: Rfer_0468
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006755859.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MQHVVFNQKGGVGKSTITCNLAAISAWQGLRTLVIDLDAQGNSTRYLLGADAPDELPNVAEFFDQSLKFTIRDKPPGDFIVNSPWEGLDLMASNPLLDELHGKLESRHKIYKLRDALLQLADDYDQIYIDTPPALNFYTRSALMAAQGCLIPFDCDDFSRRALYTLLENVAEIKADHNADLQVEGIIVNQFQPRANLPQRLVQELIDEGLPVLQPYLSSSVKIRESHEQSSPMIFLEPNHKLTLEFVALHDALL
SIO_010081: RFER_RS02330
subclass of: SO_0000673
so part of: RFER_RS02330
location: complement(479815..480579)
location: region:479815-480579:-1
so has part: feature:479815-480579:-1:exon

WP_011462793.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:479815-480579:-1:exon

RFER_RS02335
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02335
old locus tag: Rfer_0469
so part of: sequence
location: 480726..483020
location: region:480726-483020:1
so has part: feature:480726-483020:1:exon
subclass of: SO_0000010

position:480726:1
position: 480726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:483020:1
position: 483020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:480726-483020:1:exon

RFER_RS02335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02335
old locus tag: Rfer_0469
EC number: 2.7.7.65
EC number: 3.1.4.52
inference: COORDINATES: protein motif:HMM:NF012772.2
GO function: GO:0071111 - cyclic-guanylate-specific phosphodiesterase activity [Evidence IEA]; GO:0052621 - diguanylate cyclase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional diguanylate cyclase/phosphodiesterase
translation: MCDHSLSYCPDTLAAHDPDPSRELGPALVQANLPDTAEKLGLFGRWWCEPQTGQWVLSTGAASLLDVGAGLHPTGHSCFEQVVPDDVLRLMAGLREPGQAIACEFRIINEFDGLRWLRMVSEPHLAPGQALQTGVVVDVTSSRLAAMRERFCFESTQFLIGTPTLGEAVTKVIQLVCDNLGWECGAYWSLEQSQMGEHRLACQHEWHQPDCPLASFIADTAAIRLAPGEDLVGNVWRTMQPAWVEDMVNDQDFVRRKSAHACGLQSGYAFAVSYVTVGGRRHSHGVLEFYSSLSRQREAQLPGLAATIGELIAQTVQRLEQQELIRQLAQVDDLTGLANRKHFHHLLDAACLSATASSTSFAVLNIDLDRFKQINDAFGHEAGNLVLHEFAQRLQRLGPAGSALGRLGGDEFALLVTPAGSAAQLQALGERVLLAARQPFLFERQELTMSASVGISIFPDDGWTGSELMRCADAAMYRRKHGGRNGLSFFSSGTSGTLAEQRSALARQLTMEAELQRALVNHEFFLAYQPVFGRDAEHMVAVEALIRWRRPGGDVVPPDLFIPVAEQSGLIVQIGRWVVKQACHDLAQLHRAGFTDLQVNVNMAAPEFVNPNLPGELMAVLQACGVAPRHLCLELTEGLVMKQPDKVIPVMVALRQLGCKVSLDDFGMGHSSLSRMKMLPISSLKIDRSFVSGLPDDRGDAAIVRTILDLGRHMKLQVIAEGVETDAQLLFLRQFGCTLIQGFLLGRPKTVPELMAAHPQTTRD
SIO_010081: RFER_RS02335
subclass of: SO_0000673
so part of: RFER_RS02335
location: 480726..483020
location: region:480726-483020:1
so has part: feature:480726-483020:1:exon

WP_011462794.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:480726-483020:1:exon

RFER_RS02340
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02340
old locus tag: Rfer_0470
so part of: sequence
location: 483032..485578
location: region:483032-485578:1
so has part: feature:483032-485578:1:exon
subclass of: SO_0000010

position:483032:1
position: 483032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485578:1
position: 485578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:483032-485578:1:exon

RFER_RS02340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02340
old locus tag: Rfer_0470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011872813.1
GO process: GO:0006935 - chemotaxis [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chemotaxis protein CheW
translation: MTHTAAPLQIDTYLPYMRDVIRCEQSLHELNLMWRMIESSAKMNCPVEAKTILPTMAATREGFNRLEQELVASLVNEKIATVLDEIGTKAQYVIDIVVRNLYERTADVGFLATDNELCAFVAGLTDQQSAIRQRLRAYRNKYTVYDEIMLLDTAGNVLVQIDESTPLEGSVDPLLAQTLASNTYVETFRATDLRPAKKQALIYSRRMLHPDTGVVVGVLCLCFNFEQEMAGIFQSHRDPAGRSNMMLLDGSNRVIESADALWIPPGAVVPVNTASNPALMMFAGREYLVRTYPAGGYQGYPGPPGWQGQVMIPVDVAFTGGARSTLTTLDPGVAAGLLSHAQSFSPPLYEIMAAAENIQRVVWNGQVMTTGQRGEQMKLKTILDQISETGARSNELFSKSIADLYETVLASSLRDSEFVSHLLVDLLDRNLYERSDDCRWWALTPELQAALAAPAAPQRDGEMVERITGILEYINRLYTVYTCIFVYDASGCIVASTQPDQDGGTVLGTFIEADTLAQVRALRSEQDYCVTPFAPSPLYGGRPTYVYHAAIRDPNDDASVVGGIGIVFDSKPELDAMLRSGLGHKAGMNALFVDRRGCVIASTDPTRPVGTRLEMDQTLLALPNGSSASRIVIHDGHYAIMGCTVSSGYREFKVSDGYREDVLALVFDSFGEVRERPGVGHQGHTVLQSDLTAIGGFEFATFFVDGALFALPAEHVLEALPAAKISTVSRGERKACIGLLGLQHEAVNHGSVWVFDLGYLLHGQPSVIDKSSQVIIVRYGGQTIGLLVDALHDVPAFNQSQIMHSPFTGQADGALVKHFIKANGGQLLIQTVDVSSLFAVLMNRKAMA
SIO_010081: RFER_RS02340
subclass of: SO_0000673
so part of: RFER_RS02340
location: 483032..485578
location: region:483032-485578:1
so has part: feature:483032-485578:1:exon

WP_011462795.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:483032-485578:1:exon

RFER_RS02345
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02345
old locus tag: Rfer_0471
so part of: sequence
location: complement(485575..487107)
location: region:485575-487107:-1
so has part: feature:485575-487107:-1:exon
subclass of: SO_0000010

position:485575:-1
position: 485575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487107:-1
position: 487107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485575-487107:-1:exon

RFER_RS02345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02345
old locus tag: Rfer_0471
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010466913.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YifB family Mg chelatase-like AAA ATPase
translation: MSLSLVQSRALLGLDASAVTVEVHLANGLPSFTLVGLADVEVKEARERVRSAIQNSGLEFPHNKRITVNLAPADLPKDSGRFDLPIALGILAASGQIDAARLAGYEFAGELSLSGELRPVRGALAMSLALHASRVVTQLVLPPGSAEEAALVPDAQVYSARHLLDVVQHFLPQDDNAPPAEPAAGWSRVTAAPQPELVRYLDLADVKGQLGAKRALEIAAAGGHSLLLMGPPGSGKSMLAQRFAGLLPTMTTLEALQSAAVASLGGRFSLDKWAQRPTCSPHHTASAVALVGGGSPPRPGEISLAHHGVLFLDELPEFPRAALEALREPLESGVITISRAARRAEFPARFQLIGAMNPCPCGYLGSKQKVCRCTPDQVARYQSKLSGPLVDRIDLHVEVPALPAADLLQAAAGEATAVIRARCTAARERAMARQGKANQALQGQEIDHYLLLDDAAAKFLNLAAARLGWSARSTHRALKVARTIADLAGASSTQVTHVAEAMQYRRALRA
SIO_010081: RFER_RS02345
subclass of: SO_0000673
so part of: RFER_RS02345
location: complement(485575..487107)
location: region:485575-487107:-1
so has part: feature:485575-487107:-1:exon

WP_011462796.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:485575-487107:-1:exon

RFER_RS02350
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: glnK
locus tag: RFER_RS02350
old locus tag: Rfer_0472
so part of: sequence
location: 487365..487703
location: region:487365-487703:1
so has part: feature:487365-487703:1:exon
subclass of: SO_0000010

position:487365:1
position: 487365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:487703:1
position: 487703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:487365-487703:1:exon

RFER_RS02350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: glnK
locus tag: RFER_RS02350
old locus tag: Rfer_0472
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020226721.1
GO function: GO:0030234 - enzyme regulator activity [Evidence IEA]
GO process: GO:0006808 - regulation of nitrogen utilization [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-II family nitrogen regulator
translation: MKLVTAIIKPFKLDEVREALSAIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVKIEAAVADELVERVIETIEGAARTGKIGDGKIFVYDVEQVVRIRTGETGKEAL
SIO_010081: RFER_RS02350
subclass of: SO_0000673
so part of: RFER_RS02350
location: 487365..487703
location: region:487365-487703:1
so has part: feature:487365-487703:1:exon

WP_011462797.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:487365-487703:1:exon

RFER_RS02355
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: amt
locus tag: RFER_RS02355
old locus tag: Rfer_0473
so part of: sequence
location: 487738..489291
location: region:487738-489291:1
so has part: feature:487738-489291:1:exon
subclass of: SO_0000010

position:487738:1
position: 487738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:489291:1
position: 489291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:487738-489291:1:exon

RFER_RS02355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: amt
locus tag: RFER_RS02355
old locus tag: Rfer_0473
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011799556.1
GO function: GO:0008519 - ammonium transmembrane transporter activity [Evidence IEA]
GO process: GO:0072488 - ammonium transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ammonium transporter
translation: MKKLLLSFALGLSLLAGGSAALAQAPAATAEPAAASASAAPAEAKPAEAAAPAASVAPAAAATPAAAAAAPAPVPNKGDTAWMMVSTLLVILMTVPGLALFYGGLVRSKNMLSVLMQVMVTFSLIVVLWFIYGYSLAFTEGNAFIGGFDRLFMKGIWDNVAGTFANGATFSKGVVIPEIVFAAFQATFAGITCTLIVGAFAERMKFSAVLMFMALWFTFSYAPIAHMVWFWMGPDAYGAKDVVDAMNAKAGYLWQSGALDFAGGTVVHINAAVAGLVGAYMVGKRIGYGRESMAPHSLTLTMVGASLLWVGWFGFNAGSALEANGFAALAFINTFGATAAAVLAWSVGEALMRGKASILGAASGAVAGLVAITPAAGNVGVGGALVIGTVAGFACLWGVNGLKKLIGADDSLDVFGVHGVGGIVGALLTGVFNSPALGGPGYVADWVTATMVTSADYSIASQVWIQAKAVLTTIVWSGVVSFVAYKIVDLTIGLRVSEEDEREGLDITSHGETAYSN
SIO_010081: RFER_RS02355
subclass of: SO_0000673
so part of: RFER_RS02355
location: 487738..489291
location: region:487738-489291:1
so has part: feature:487738-489291:1:exon

WP_041790050.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:487738-489291:1:exon

RFER_RS02360
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02360
old locus tag: Rfer_0474
so part of: sequence
location: complement(489734..490618)
location: region:489734-490618:-1
so has part: feature:489734-490618:-1:exon
subclass of: SO_0000010

position:489734:-1
position: 489734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:490618:-1
position: 490618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489734-490618:-1:exon

RFER_RS02360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02360
old locus tag: Rfer_0474
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018311105.1
GO function: GO:0001216 - DNA-binding transcription activator activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MELLNDMALFVEVVNAKGFRGAADATGVPNSTVSRRIALLEKAIGLRLLHRTTRRVELTEAGRIYYERCRRIVDEARIAHEQLGEMLAQPSGVLRASLPVDFASIYLAPIITEFAQHYPGIRFEFDLTPRRVDLITEPFDVAIRVGDLPDSTLIARQLASIKAEVFASPGYLAKAGEPQIPSDLSKHECLGFPKVEHWVLQSGVHTEQVPVSGRYVLNNVGMFRRLATLDQGLILLPRAVVAEDIQLGRLRHVLPGWHGKPQPVYALTETRLLPAKTQRFIEFVRDRIATMSAV
SIO_010081: RFER_RS02360
subclass of: SO_0000673
so part of: RFER_RS02360
location: complement(489734..490618)
location: region:489734-490618:-1
so has part: feature:489734-490618:-1:exon

WP_011462799.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:489734-490618:-1:exon

RFER_RS02365
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02365
old locus tag: Rfer_0475
so part of: sequence
location: 490720..491613
location: region:490720-491613:1
so has part: feature:490720-491613:1:exon
subclass of: SO_0000010

position:490720:1
position: 490720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491613:1
position: 491613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:490720-491613:1:exon

RFER_RS02365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02365
old locus tag: Rfer_0475
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013206624.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family NAD(P)-dependent oxidoreductase
translation: MKKDPSLQLSASRFNPSEVAGKKVAIIGGTGGIGRALAREMATHGAHVTVVGQTFRDAGVPNIEFVQADLSLMHEARRVASSLPAETLDLVIFTTGIFAARKRQETLEGLERDMAVSFLSRQVILQGIAHRLGVQLSKGHRKSRVFIMGYPGTGQAGTLGDLNSESAYSAMSAHMNTVAGNEMLVLDSAQRYPNINTYGLNPGLIKTDIRINLLGGNKFLFALLEGLIGVFTPTAETYARRIVPLMLNSQINGFTGTLFNNKGQAIHPSAGLTGAHIRAFLTESRTLVERAVDSQVA
SIO_010081: RFER_RS02365
subclass of: SO_0000673
so part of: RFER_RS02365
location: 490720..491613
location: region:490720-491613:1
so has part: feature:490720-491613:1:exon

WP_011462800.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:490720-491613:1:exon

RFER_RS02370
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02370
old locus tag: Rfer_0476
so part of: sequence
location: 491652..492716
location: region:491652-492716:1
so has part: feature:491652-492716:1:exon
subclass of: SO_0000010

position:491652:1
position: 491652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492716:1
position: 492716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491652-492716:1:exon

RFER_RS02370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02370
old locus tag: Rfer_0476
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011354101.1
GO function: GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alkene reductase
translation: MTSLFNTIQLGRVTLSNRLAMAPMTRSRAQFDGTPGASAATYYAQRASVGLIITEGTQPSEDGQGYMLTPGIYTDAHVAGWRTVSDAVHDRGGRLFIQLMHAGRLSHPDNTPHHRQSVAPSAIESGAQMFTPTGLQPAPAPRALSLNEIRQTTTDFRFAAKRAIEAGADGVEIHGANAYLVQQFLAPSSNSRTDAYGGPIENRARFAIEVAQAIAEEIGADRTAIRLSPGTTLWGIDEGPEGPALYRYLVAELNRLGPAYLHIMHQGDVPLLADIRRLWTGTLMVNHPGRAREQIGSDLNGGLADLESYGQMVLANPDFVERLKVDAPMNIADRNSFFGGNDAGYIDYRTIGGK
SIO_010081: RFER_RS02370
subclass of: SO_0000673
so part of: RFER_RS02370
location: 491652..492716
location: region:491652-492716:1
so has part: feature:491652-492716:1:exon

WP_011462801.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:491652-492716:1:exon

RFER_RS02375
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02375
old locus tag: Rfer_0477
so part of: sequence
location: complement(492997..494610)
location: region:492997-494610:-1
so has part: feature:492997-494610:-1:exon
subclass of: SO_0000010

position:492997:-1
position: 492997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:494610:-1
position: 494610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492997-494610:-1:exon

RFER_RS02375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02375
old locus tag: Rfer_0477
inference: COORDINATES: protein motif:HMM:NF012301.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MTFSLPQANTLIIDDFQGMRTMLRDFVRLMGVTRIDTASNGHEAINQLSANKYDIVICDYNLGPGANGQQVLEEAKLRNFVGVSTIWVMVTAEKTTDMVMGAAEVKPDDYLLKPINQVLLQSRLEKLITRKQSLGAIEAAIRTQDYSAAIALCDQQLNARAVNPQEVLRIKSDLLLTLGDYPAARTLFESVLALRSVAWAKTGLGKVLFYGQDYAGAVQLFQQVLQENRMYMEAADWLAKTLDAMGDSAQAQQVLEDAVQLSPNSPIRQKTLGDTAYRNGALDVAQAAFEKTIKISEFSPHKNPAVYARLARVFSDQDSPEEALNILKRSKADFRYNPAAALQTAAAESLVYQKMGQVQKAEAAMLDAERLMEQLADKVSPEMTMEVAKALFKLGKKDKACGLLRDLVKNNHEDGELSRQIGAVFEGENMAEEGQTLIKASRNEVIDINNQGVTLAKQGDFQQAVKLLRTAAQQLPHNEVISVNLCGLLIGLMQQKGKTEDLVLETRELLGRVREMNPVNQKYRAYALALARLTNEH
SIO_010081: RFER_RS02375
subclass of: SO_0000673
so part of: RFER_RS02375
location: complement(492997..494610)
location: region:492997-494610:-1
so has part: feature:492997-494610:-1:exon

WP_011462802.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:492997-494610:-1:exon

RFER_RS02380
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02380
old locus tag: Rfer_0478
so part of: sequence
location: complement(494634..495326)
location: region:494634-495326:-1
so has part: feature:494634-495326:-1:exon
subclass of: SO_0000010

position:494634:-1
position: 494634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:495326:-1
position: 495326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494634-495326:-1:exon

RFER_RS02380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02380
old locus tag: Rfer_0478
inference: COORDINATES: protein motif:HMM:NF014567.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAMP domain-containing sensor histidine kinase
translation: MTTEDISFTDFIASSIHDMKNSLNVQVNGLETIADACRARFDDDTLAALGPIIHQAHRMNANLIQLLSLYKLGKSIYPVDIAEQSVADVIAETLLHNRSVMEFKGITMDVDCDEGCYWYFDRDLVTGILLNALNNAYSYTTDKIRIAARIEGGFLELRVEDNGRGYPDTMLQSDGMAANKGVNFSSGSTGLGFYFSSRVAQMHKNGARQGSLTIENGGAYGGGCFVVRLP
SIO_010081: RFER_RS02380
subclass of: SO_0000673
so part of: RFER_RS02380
location: complement(494634..495326)
location: region:494634-495326:-1
so has part: feature:494634-495326:-1:exon

WP_011462803.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:494634-495326:-1:exon

RFER_RS02385
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02385
old locus tag: Rfer_0479
so part of: sequence
location: 495521..496459
location: region:495521-496459:1
so has part: feature:495521-496459:1:exon
subclass of: SO_0000010

position:495521:1
position: 495521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496459:1
position: 496459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:495521-496459:1:exon

RFER_RS02385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02385
old locus tag: Rfer_0479
EC number: 3.1.1.99
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011799557.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SMP-30/gluconolactonase/LRE family protein
translation: MSWQTVTPQPCLLGESPFWHPHEQRLYWVDIAGRKILRTQPGLSPVEAWAMPSEPGCIAPAAGGGLVIALRHGVFRAREWGGPLQHIATLDYDPQHLRANDGKCDALGRFWIGTLDETRVARNAALYCLDCRAGIPPQIERQLDQTVLPATTANGLAWSPDDRTLYWADTPSHAIQAWDYDLARNCLTGQRTFAQFAPKPPGWQSDGAANNGGYQGRPDGAAVDVLGNYWVAMYEGRRVCQLAPDGSLLAEFAVPAQCPTMPCFGGEDLQTLFVTSARHGRGAAELTRFPESGCVFAMRVSVPGLPVNFFVD
SIO_010081: RFER_RS02385
subclass of: SO_0000673
so part of: RFER_RS02385
location: 495521..496459
location: region:495521-496459:1
so has part: feature:495521-496459:1:exon

WP_011462804.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:495521-496459:1:exon

RFER_RS02390
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: glcE
locus tag: RFER_RS02390
old locus tag: Rfer_0480
so part of: sequence
location: 496510..497682
location: region:496510-497682:1
so has part: feature:496510-497682:1:exon
subclass of: SO_0000010

position:496510:1
position: 496510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497682:1
position: 497682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:496510-497682:1:exon

RFER_RS02390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: glcE
locus tag: RFER_RS02390
old locus tag: Rfer_0480
EC number: 1.1.99.14
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019430008.1
GO function: GO:0071949 - FAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycolate oxidase subunit GlcE
translation: MDPLHQITERIRAAAAHRTPLRIRAGGSKDFYGQSLQGEVLDLTGLSGIISYEPSELVVTVRAGTPLSELEAVLAEKGQCLAFEPPHFALPGVGPSGATVGGMVAAGLSGPARASVGGVRDYVLGVKLLNGRAELLTFGGQVIKNVAGYDVSRLMVGALGTLGVLTEMSLKVLPLAPFEATLMAAGIAQQAALDLLQRWGGQPLPLNASCWVRDDSVSPARDTLFVRLRGASAAVAAACPRLLADLQAAGGDCARLDNAQAGPDWAACRDQTLPFFQPPAPDLGLWRLSLPPTAPALALPYAPLIEWHGGLRWLWAPLTAQAQLRQAATDAGGNAMLFRAPDADKTGATARFHPLTPVLAQIHQRLKAEFDPAGIFNRGRMYPDANSTRP
SIO_010081: RFER_RS02390
subclass of: SO_0000673
so part of: RFER_RS02390
location: 496510..497682
location: region:496510-497682:1
so has part: feature:496510-497682:1:exon

WP_011462805.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:496510-497682:1:exon

RFER_RS02395
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: glcF
locus tag: RFER_RS02395
old locus tag: Rfer_0481
so part of: sequence
location: 497660..498928
location: region:497660-498928:1
so has part: feature:497660-498928:1:exon
subclass of: SO_0000010

position:497660:1
position: 497660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498928:1
position: 498928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:497660-498928:1:exon

RFER_RS02395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: glcF
locus tag: RFER_RS02395
old locus tag: Rfer_0481
EC number: 1.1.99.14
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019426251.1
GO function: GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycolate oxidase subunit GlcF
translation: MQTQLAPEYQATADGLAAEAILRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLMKQVLEGATPTRKTQLHLDRCLTCRSCESTCPSGVQYGHLLDIGRKLVDAKVPRPAGERALRWVLKEGLPSPLFAPAMALGQMVRPLLPAALQAKVPAKQSAGAWPTRGHARQVLLLAGCVQPAMAPNINHATARVFDAAGVQCVIAPKAGCCGAVKFHLNDQDGGMMEMRANIDAWWPYLQGHNGHAGVEAILMNASGCGVTVKEYGHILRDDPVYAEKAARISALTQDVSEWLPELSEKLRSRVSPQVSKQAGAMVFHPPCSLQHGQQLRGGVERYLGELGFNIKVTGFEAHLCCGSAGTYSVLNPDLSHQLLARKLGHLNTTFGAAPPDVIVSANIGCITHLQSGTDTPVRHWIEVLDEALQESP
SIO_010081: RFER_RS02395
subclass of: SO_0000673
so part of: RFER_RS02395
location: 497660..498928
location: region:497660-498928:1
so has part: feature:497660-498928:1:exon

WP_011462806.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:497660-498928:1:exon

RFER_RS02400
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02400
old locus tag: Rfer_0482
so part of: sequence
location: 499016..500074
location: region:499016-500074:1
so has part: feature:499016-500074:1:exon
subclass of: SO_0000010

position:499016:1
position: 499016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500074:1
position: 500074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:499016-500074:1:exon

RFER_RS02400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02400
old locus tag: Rfer_0482
EC number: 2.5.1.54
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019142304.1
GO function: GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
GO process: GO:0009423 - chorismate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-deoxy-7-phosphoheptulonate synthase
translation: MTFPSAFENLNVLSQHTLLSPAQLHDDVPASVRATQTVTTARQAVASILSGRDPRLLVVVGPCSIHDIAAAKDYAQRLKALADELADQLFIVMRVYFEKPRTTVGWKGLINDPHMDDSFDIEEGLHIARRLLVELNDMGLPCGTEALDPITPQYLGDLIAWSAIGARTTESQTHREMASGLSSPVGFKNGTDGDLDVALNGMLSAAQPHAFLGINGDGQVALTQTRGNAFGHLILRGGAVPNYDSVAVAQAEAALRAAKLPVNIVVDCSHANSRKNHALQTLVLKDVVGQILDGNRSIKGVMLESNLFEGNQKLARPQDLRYGVSITDACLGWDSTAASLREAAERLRTMPR
SIO_010081: RFER_RS02400
subclass of: SO_0000673
so part of: RFER_RS02400
location: 499016..500074
location: region:499016-500074:1
so has part: feature:499016-500074:1:exon

WP_011462807.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:499016-500074:1:exon

RFER_RS02405
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02405
old locus tag: Rfer_0483
so part of: sequence
location: 500165..501019
location: region:500165-501019:1
so has part: feature:500165-501019:1:exon
subclass of: SO_0000010

position:500165:1
position: 500165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501019:1
position: 501019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500165-501019:1:exon

RFER_RS02405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02405
old locus tag: Rfer_0483
EC number: 4.2.2.n1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005799663.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lytic transglycosylase domain-containing protein
translation: MGLALALPVLAQNSTPDARAIDLRQQAIAYENGEGVPRNPALAISLYCQAAALGDAQAHYSLGWIYANGRGVPRDDAMAAYFFQAAAAQGLEAAQRMLKIVGEPTPDVPECLRPPAPPPASATDLVPEPGVDYQAIAPRKIFELVMKMAPQYQVQPQLALAIIAAESNFDSQALSPMNAQGLMQLIPETSQRFQVRNPFDAAQNIRGGLAYLRWLLAYFEGDIVLVAAAYNAGEGKVERYRGVPPYQETRAYVQRIVRAVGTLAHPFDARVTPPSPALALIRLN
SIO_010081: RFER_RS02405
subclass of: SO_0000673
so part of: RFER_RS02405
location: 500165..501019
location: region:500165-501019:1
so has part: feature:500165-501019:1:exon

WP_244095787.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:500165-501019:1:exon

RFER_RS02410
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02410
old locus tag: Rfer_0484
so part of: sequence
location: complement(501026..501511)
location: region:501026-501511:-1
so has part: feature:501026-501511:-1:exon
subclass of: SO_0000010

position:501026:-1
position: 501026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501511:-1
position: 501511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:501026-501511:-1:exon

RFER_RS02410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02410
old locus tag: Rfer_0484
EC number: 1.11.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011799563.1
GO function: GO:0043295 - glutathione binding [Evidence IEA]; GO:0004602 - glutathione peroxidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutathione peroxidase
translation: MSPVYDFEALQINGQPVSLSQFKGRVMLIVNTASACGFTPQFAGLEELHETYGNKGLVVLGFPCNQFGAQDAGSNNEIAEFCQLNYGVSFPMMAKIDVNGAQAHPLYQWLTQEAPGLLGSKAIKWNFTKFLVGKDGQVLKRYAPTATPASLAKDIETALAA
SIO_010081: RFER_RS02410
subclass of: SO_0000673
so part of: RFER_RS02410
location: complement(501026..501511)
location: region:501026-501511:-1
so has part: feature:501026-501511:-1:exon

WP_011462809.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:501026-501511:-1:exon

RFER_RS02415
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02415
old locus tag: Rfer_0485
so part of: sequence
location: complement(501619..502038)
location: region:501619-502038:-1
so has part: feature:501619-502038:-1:exon
subclass of: SO_0000010

position:501619:-1
position: 501619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502038:-1
position: 502038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:501619-502038:-1:exon

RFER_RS02415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02415
old locus tag: Rfer_0485
inference: COORDINATES: protein motif:HMM:TIGR02246.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SgcJ/EcaC family oxidoreductase
translation: MSADSAAVTRIVEAFAECWNRHDMNAFAELFAPDAEFVNVVGLWWKGRAEIKAAHEFTHQTLFKNSRLTLVELSTRFPTPQIAIARCRWRLVGHVTPQGIPLPERQGVLLNVLRQQDGKWFIIDSQNTDIIEGVASRPQ
SIO_010081: RFER_RS02415
subclass of: SO_0000673
so part of: RFER_RS02415
location: complement(501619..502038)
location: region:501619-502038:-1
so has part: feature:501619-502038:-1:exon

WP_041790052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:501619-502038:-1:exon

RFER_RS02420
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02420
old locus tag: Rfer_0486
so part of: sequence
location: complement(502253..503131)
location: region:502253-503131:-1
so has part: feature:502253-503131:-1:exon
subclass of: SO_0000010

position:502253:-1
position: 502253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:503131:-1
position: 503131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:502253-503131:-1:exon

RFER_RS02420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02420
old locus tag: Rfer_0486
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013538699.1
GO function: GO:0005215 - transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DMT family transporter
translation: MSKTALAAAALTLNAFVWGVSWWPFRSLQSLGLHPLWTTALIYTFGLLCLALVQPRAWRGFLRHPELWWLLLAAGLTNVGFNWAVTVGDVVRVVLLFYLMPAWVVLLAWPLLGEKPSTGSLVRLALALAGVVIVLKTPASPWPVPESLADWLALMAGFCFALTNILLRRLNHTPGESRMLAMFVGGALLAGAAAVLGVGLDVVTPLPAPKLAWVAWALLISLAFLAGNLALQYGAAHLSASATSLIMLSEVIFASGSSVLLGAGTLSARTLIGGALILLASLLSVLSFRQPS
SIO_010081: RFER_RS02420
subclass of: SO_0000673
so part of: RFER_RS02420
location: complement(502253..503131)
location: region:502253-503131:-1
so has part: feature:502253-503131:-1:exon

WP_041790055.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:502253-503131:-1:exon

RFER_RS02425
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: lplT
locus tag: RFER_RS02425
old locus tag: Rfer_0487
so part of: sequence
location: complement(503163..504446)
location: region:503163-504446:-1
so has part: feature:503163-504446:-1:exon
subclass of: SO_0000010

position:503163:-1
position: 503163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:504446:-1
position: 504446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:503163-504446:-1:exon

RFER_RS02425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: lplT
locus tag: RFER_RS02425
old locus tag: Rfer_0487
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011481166.1
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lysophospholipid transporter LplT
translation: MKRGFFTIMSAQFFSSLADNALFVTAVQLLRSSHAPEWQQAALVPMFALFYVVLAPFVGAFADSMPKGKVMLLSNFIKVLGCLFMLFGSHPLLAYAIVGLGAAAYSPAKYGILTELLPASQLVKANGWIEGLTIASIILGVLLGGQLVGPVIAPWLLAFDFPLVDTGVNNAPEAAICVLIFVYLLAAWFNTHIPLTGVEMRPMSRRVTSLLPDFWACNVRLWRDKLGQISLAATTLIWGVAGNLRFIVLAWAAAALGYSVTQASALQGVVAIGMAAGAVVASMRMRLEDGPRVITLGIVMGILIILLIFITNVWVAAPFLILLGALGGFLVVPMNALLQHRGHNLMGSGRSIAVQNFNEQACILGLGAAYSLSTGLGLPTFTAITGFGLVIAGFMWLIRRWHARNCVVHQVEIEHLLSIARNDKFEV
SIO_010081: RFER_RS02425
subclass of: SO_0000673
so part of: RFER_RS02425
location: complement(503163..504446)
location: region:503163-504446:-1
so has part: feature:503163-504446:-1:exon

WP_011462812.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:503163-504446:-1:exon

RFER_RS02430
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: alr
locus tag: RFER_RS02430
old locus tag: Rfer_0488
so part of: sequence
location: 504569..505693
location: region:504569-505693:1
so has part: feature:504569-505693:1:exon
subclass of: SO_0000010

position:504569:1
position: 504569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505693:1
position: 505693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504569-505693:1:exon

RFER_RS02430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: alr
locus tag: RFER_RS02430
old locus tag: Rfer_0488
EC number: 5.1.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011803645.1
GO function: GO:0008784 - alanine racemase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alanine racemase
translation: MPRPIQATIHTAALRHNLARARLAAPDAKVWAIVKANAYGHGIERVFEGLRAADGFALLDLDEAQRVRALGWRGPILLLEGVFELRDLELCSRLDLWHTVHCDEQIDMLASHKTKVAQRVFLKMNSGMNRLGFTPQRYRAAWTRLNALPQVDEISLITHFSDADGARGITEQMAVFAEVTRDLPGERTLSNSAATLLHTPARQPGDGFVASDWVRPGIAIYGSAPDFPQHSATDWGLQPSMTLTAKIIATQTVDTGASVGYGSTFVADKPIQVGVVACGYADGYPRLCPTGTPVLVNGIRTRTVGRVSMDMLAVDLSAVTAAGGQVGIGSEVTLWGRAANGLVLGIDEVAQPAGTVGYELMCALAPRVPVLVAD
SIO_010081: RFER_RS02430
subclass of: SO_0000673
so part of: RFER_RS02430
location: 504569..505693
location: region:504569-505693:1
so has part: feature:504569-505693:1:exon

WP_011462813.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:504569-505693:1:exon

RFER_RS02435
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02435
old locus tag: Rfer_0489
so part of: sequence
location: 505693..506901
location: region:505693-506901:1
so has part: feature:505693-506901:1:exon
subclass of: SO_0000010

position:506901:1
position: 506901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:505693-506901:1:exon

RFER_RS02435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02435
old locus tag: Rfer_0489
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDYVMLPVARLKLGNTLPIDVWAPDGRLLLRRGQAILSEQQREMLHAHQACMTASDARAWQKSYERLINTLLQRGADLDAIMRAELPSELVETDYLSGAQVLGGWLDLQEILRGLLYQGEAAINPLPRLAGTESRALELLRADPDECLFILFQALADISLGYCATHALLSAVVCALTAEKLDMAAAAGGSLFRAALVMNIGMAREQDKLAMQSSLPTEAQRVLVREHPCKSVELLRLMGVSDEDQLDIVRWHHEVNESHGLAHNVMARRLLRLADGFVAKMAARKTRLAMSPLGAAKSVFLGATPDTASIGSAMATALGFYPPGTYVQLFNGEKAVVVARGLRANQPQVVSIVNAGGMPVSKYLYRETSNPRFAIRTPINAERIKVKVSLEKVQKARKEHTD
SIO_010081: RFER_RS02435
subclass of: SO_0000673
so part of: RFER_RS02435
location: 505693..506901
location: region:505693-506901:1
so has part: feature:505693-506901:1:exon

WP_011462814.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:505693-506901:1:exon

RFER_RS02440
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02440
old locus tag: Rfer_0490
so part of: sequence
location: 506999..507961
location: region:506999-507961:1
so has part: feature:506999-507961:1:exon
subclass of: SO_0000010

position:506999:1
position: 506999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507961:1
position: 507961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:506999-507961:1:exon

RFER_RS02440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02440
old locus tag: Rfer_0490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013122438.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DnaJ C-terminal domain-containing protein
translation: MEFKDYYQIMGLQRSATQDEIKRAHRTLARKYHPDVSKEPNAEARFKEIGEAYEVLKDPEKRAAYDQLGANWKGGQEFRPPPDWNAGFETGGAGFGAGEAGDYSDFFESLFSRGFGAQRGGRRGGAAFHAPGQDRHAKIQIDLEDAYQGAKRRVTLQVPTLDAQGHVATREHTIEFSIPKGVRAGQQIRLAGQGDPGMGQGAPGDLYLEIEFRAHAHYRIDKHDVYLDLPVAPWEAALGAQIEVPTPSGFVELKIPAGSVEGRKLRLKGRGIPARTPGDFYFVLKIALPPADSEAAQAFYRSMATQFKSFKPRARLGAAA
SIO_010081: RFER_RS02440
subclass of: SO_0000673
so part of: RFER_RS02440
location: 506999..507961
location: region:506999-507961:1
so has part: feature:506999-507961:1:exon

WP_041791303.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:506999-507961:1:exon

RFER_RS02445
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02445
old locus tag: Rfer_0491
so part of: sequence
location: 507958..508314
location: region:507958-508314:1
so has part: feature:507958-508314:1:exon
subclass of: SO_0000010

position:507958:1
position: 507958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508314:1
position: 508314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507958-508314:1:exon

RFER_RS02445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02445
old locus tag: Rfer_0491
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011801607.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chaperone modulator CbpM
translation: MSTTPKRVATRAATAEPATELTLLDISRTCAVQTDFILELIEEGVLAPLAGSAPGSWRFTTVQTRQVTVAARLQRDLGVNPAGAALALQLLDELETLRAQLAASASDDDSGPSSTRSD
SIO_010081: RFER_RS02445
subclass of: SO_0000673
so part of: RFER_RS02445
location: 507958..508314
location: region:507958-508314:1
so has part: feature:507958-508314:1:exon

WP_011462816.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:507958-508314:1:exon

RFER_RS02450
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02450
old locus tag: Rfer_0492
so part of: sequence
location: complement(508306..510879)
location: region:508306-510879:-1
so has part: feature:508306-510879:-1:exon
subclass of: SO_0000010

position:508306:-1
position: 508306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:510879:-1
position: 510879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:508306-510879:-1:exon

RFER_RS02450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02450
old locus tag: Rfer_0492
EC number: 7.2.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013124457.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0019829 - ATPase-coupled monoatomic cation transmembrane transporter activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA]; GO:0015662 - P-type ion transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cation-translocating P-type ATPase
translation: MVLPASDAGLTTAQAAQRLAEDGPNALPGDQRRTLLGIARETLREPMFLLLLAASLLYLLLGDLQEGLILLGLVLVVLALTLYQEGKTERALESLRDLSSPRALVLRDGQPLRIAGSDVVLGDILILAEGDRIPADAVLLSGTEVQVDESLLTGEPVPVSKVADVMAVQAAAPRPGGDGQAYLFSGTLLVKGHGSARVTATGARSEIGRIGTALVSLSSEPSPLKKQTASLVKVLALIALAASLFLVATFGLLRGDWLAALLAGIALAMALLPQEFTVVLTVIPALGAWRLSKQDVLTRRIAAIETLGATSVLCVDKTGTLTENRMTVAELYVQGHKLLIDYAVTSELPESFHTLVEFSILASVAAPFDPMEKAFHRLGQHFLQDTEHLHHDWTLMQQYGLTPELRAMSHVWKARQDQQHVVAAKGAPEAIVDLCHLDGAAQARIAAAVDAMAAKGLRVLGVAQARFEGEHWPAIEHDFEFEFIGLLGLADPLRGEIPDAVAECRSAGIRVVMITGDYPATASAIARQAQLQSTLDTAAADPLLTGDAMAAMSDAELQARMQSVSICARIAPEQKLRIVQALKANGEVVAMTGDGVNDAPALKAAHVGVAMGGRGTDVAREAASLVLLDDNFASIVRAVRLGRRIFDNLRKSMSYILAVHVPIAGMALLPVLLGWPTMLFPLHIAFLELVIDPACSMVFENEPSESDVMRRPPRNVNTPLFGGLTLLLALLQGLGALAVAMGAAMWGADQLPEGGARAFAFATLVCTNLALIFSNRSRAGSLWASLWVPNRTLWIVASAALALMALALYLPWLARLFVFEPLPLLYLGAALGLGLASMFWFEAVKLGQRQTAKAASI
SIO_010081: RFER_RS02450
subclass of: SO_0000673
so part of: RFER_RS02450
location: complement(508306..510879)
location: region:508306-510879:-1
so has part: feature:508306-510879:-1:exon

WP_011462817.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:508306-510879:-1:exon

RFER_RS02455
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: mgtA
locus tag: RFER_RS02455
old locus tag: Rfer_0493
so part of: sequence
location: complement(510849..513335)
location: region:510849-513335:-1
so has part: feature:510849-513335:-1:exon
subclass of: SO_0000010

position:510849:-1
position: 510849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:513335:-1
position: 513335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510849-513335:-1:exon

RFER_RS02455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: mgtA
locus tag: RFER_RS02455
old locus tag: Rfer_0493
EC number: 7.2.2.14
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013104643.1
GO function: GO:0015444 - P-type magnesium transporter activity [Evidence IEA]
GO process: GO:0015693 - magnesium ion transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: magnesium-translocating P-type ATPase
translation: MNGLTSLVAAARLRQYGPNRLQPARQRALLLQFLAHFKNPLVLVLLAASGLSALTGDVTGALIIGVIVLMSVTLDFVQSYRAGRAAEQLALQVAITATVLRDGQRRELPVTELVPGDVVLLSAGNLVPADARLLEADDFFVNQAQLTGEPYPVEKRASLPDQADAEQASSQAWALDAADAVFMGSSVVSGSASVLIGRTGSTSALGQIAVSLADKAPPTAFEIGTRHFGMLIMRLTFLLVLFTLLVNVALHRPLLESFLFAVALAVGLTPELLPMVVSVTLTRGALRMAALKVIVKRPSAIQDMGAMDVLCTDKTGTLTEAKIRLERHVDAGGQDDPHVLELAYLNSYFESGLKSPLDDAILAHGEIDVSAWTKIDEVPFDFERRRVSVLVQRAGARRLVVKGAPEDIVRLCTHYQDSADATVALDAAARVRITQLFDSLSEEGFRVLGIASRDVPGDHPHAMVSDESELVFAGFAAFLDPPKASAGEALKALAASGVAVKIVTGDNERVTRHVCTQLGVAIEGVLTGTELAALNDDALRARVEGANLFCRVNPAQKNRILLALKGRGHVVGYLGDGINDAPSLHTADVGISVEGAVDVAKQAAAMILLERDLMVLHQGILEGRRTFGNVMKYIMMATSSNFGNMFSMAAATLFLPFLPMLPMQILLNNLMYDVSEITLPMDNVDEENLAQPKRWDMTFIRNFMLTIGPISSLFDFLTFYLLLSLFNAHESLFRTGWFVESIATQVLVIFVIRTRRNPLRSHPNRWLVLTSLGVVVTAMLLPFTPLAPYLGFTPLPLSYFGLLGALVVAYLLMVEGGKQWFYRRATRA
SIO_010081: RFER_RS02455
subclass of: SO_0000673
so part of: RFER_RS02455
location: complement(510849..513335)
location: region:510849-513335:-1
so has part: feature:510849-513335:-1:exon

WP_011462818.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:510849-513335:-1:exon

RFER_RS02460
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02460
old locus tag: Rfer_0494
so part of: sequence
location: 513638..513970
location: region:513638-513970:1
so has part: feature:513638-513970:1:exon
subclass of: SO_0000010

position:513638:1
position: 513638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513970:1
position: 513970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513638-513970:1:exon

RFER_RS02460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02460
old locus tag: Rfer_0494
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005672432.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YegP family protein
translation: MAGWYELSKSSDGQFRFVLKDGTGDTLLTSELYKARSSAEQGVASVQANSLLDERYERKTASNGKAFFNLKAANHQVIGTSQMYATEAAREADIARVKAEGASKTVKEKT
SIO_010081: RFER_RS02460
subclass of: SO_0000673
so part of: RFER_RS02460
location: 513638..513970
location: region:513638-513970:1
so has part: feature:513638-513970:1:exon

WP_011462819.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:513638-513970:1:exon

RFER_RS23280
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS23280
old locus tag: Rfer_0495
so part of: sequence
location: complement(513880..514590)
location: region:513880-514590:-1
so has part: feature:513880-514590:-1:exon
subclass of: SO_0000010

position:513880:-1
position: 513880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:514590:-1
position: 514590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513880-514590:-1:exon

RFER_RS23280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS23280
old locus tag: Rfer_0495
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011484479.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aldolase/citrate lyase family protein
translation: MKTPVNIFKQALQNQQAQIGLWLGLADPYCAEILAGTGYDWLVIDGEHAPNDLRSVLGQLQAIASATSALAGPGSHPVVRVSVGETALIKQYLDLGVQTILVPMVDTAAQAARHPGRQRRPGPPMVDCRGLVRGGGRRDHAAVGGSDSAAGEVQAVGGSRRCEQWLLNIAIKIAATWAYSTRARARYGSLTFSKVCSQGASADRQKAQVFSLTVLDAPSALTRAMSASRAASVAYI
SIO_010081: RFER_RS23280
subclass of: SO_0000673
so part of: RFER_RS23280
location: complement(513880..514590)
location: region:513880-514590:-1
so has part: feature:513880-514590:-1:exon

WP_011462820.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:513880-514590:-1:exon

RFER_RS23890
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS23890
so part of: sequence
location: 514782..514946
location: region:514782-514946:1
so has part: feature:514782-514946:1:exon
subclass of: SO_0000010

position:514782:1
position: 514782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:514946:1
position: 514946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:514782-514946:1:exon

RFER_RS23890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS23890
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDSSLRLFIHQFGGVVLAALVPVILIAFMSIPFTLGGHPGDVRSAAAPVARHMT
SIO_010081: RFER_RS23890
subclass of: SO_0000673
so part of: RFER_RS23890
location: 514782..514946
location: region:514782-514946:1
so has part: feature:514782-514946:1:exon

WP_166485638.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:514782-514946:1:exon

RFER_RS02465
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02465
old locus tag: Rfer_0496
so part of: sequence
location: 514998..515954
location: region:514998-515954:1
so has part: feature:514998-515954:1:exon
subclass of: SO_0000010

position:514998:1
position: 514998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515954:1
position: 515954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:514998-515954:1:exon

RFER_RS02465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02465
old locus tag: Rfer_0496
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018059036.1
GO function: GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cation diffusion facilitator family transporter
translation: MKFTELADDPEDTDHSPAERIAAASRSTWVSVVVNLVLTITQIAIGVVAKSQGLIADGIHSLSDLVADFVVLFASHHSKKDADADHPYGHQRFETAASLVLGTLLLAVGLGMLWSAARKLEAPETVQTVHIMALWVAGGALIAKELLFRYMLSVAKRVKSSMLVANAWHARSDAASSLVVGIGIVGNLAGYPILDPIAALIVGFMVTKMGWGFSWDALHDLMDRAVDEQEVQAIRLTLIETPGVSGVHDVRTRKMGDMIVVDAHIEVDAAISVEAGHDIAVEARQRVLQRHRVLNLMTHVDPWRRPDLDHPTPAAAPR
SIO_010081: RFER_RS02465
subclass of: SO_0000673
so part of: RFER_RS02465
location: 514998..515954
location: region:514998-515954:1
so has part: feature:514998-515954:1:exon

WP_011462821.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:514998-515954:1:exon

RFER_RS02470
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02470
old locus tag: Rfer_0497
so part of: sequence
location: 516085..517329
location: region:516085-517329:1
so has part: feature:516085-517329:1:exon
subclass of: SO_0000010

position:516085:1
position: 516085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517329:1
position: 517329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516085-517329:1:exon

RFER_RS02470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02470
old locus tag: Rfer_0497
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012346169.1
GO function: GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2Fe-2S iron-sulfur cluster-binding protein
translation: MTAPLLLAYICAALLFQLALGIGVMVWRRRGVAAKTPVAESVETRPVSSGAWPGWREFRVLRREFEDDTHTQCSFYLVPVDGAALPPFRPGQFLTFTLQVADAGEPGGQRTITRCYSLSDRPEPTCYRITIKRIPTPDDRPLVPPGASSSHFHDRIRAGDVLQVKAPSGHFFIDPDPQVPAVLIAGGIGVTPMMSMLRWCLAEQPGRTLHLYYGVRQGGEHAFKLQLEQLANSHPNFHLSVVYSRPGPNDAPERDYQQAGHVDIDLLRRTLPHGRHQFYVCGPAAMMESLVPALARWGVPQPDIHFEAFGPASVRLPGATPQAQAAGLAAPLAIHFRRSGRTLTWDGKDDTLLDFAERHDVAVASGCRSGGCGTCETKLISGRVRYANPPEHDVAPRHCLLCVGRPESALEIEA
SIO_010081: RFER_RS02470
subclass of: SO_0000673
so part of: RFER_RS02470
location: 516085..517329
location: region:516085-517329:1
so has part: feature:516085-517329:1:exon

WP_041790056.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:516085-517329:1:exon

RFER_RS02475
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02475
old locus tag: Rfer_0498
so part of: sequence
location: 517335..517913
location: region:517335-517913:1
so has part: feature:517335-517913:1:exon
subclass of: SO_0000010

position:517335:1
position: 517335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517913:1
position: 517913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517335-517913:1:exon

RFER_RS02475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02475
old locus tag: Rfer_0498
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012346168.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKARLIRREVLPFLLSLGTLALATVLIDALLHLANIAWIGRYLGIPGTLLILGSFGYSLRKRRLIQAGRPLQLLRWHERMAWLGSLLVLVHAGIHFNSILAWLAVVAMLINVASGLTGKFLLDRSRRRLEEARQRMRQHGLAADELDEHLYWDSLTFDAVKQWRSVHFPITLAFAVLALAHIMAVFLFWGWR
SIO_010081: RFER_RS02475
subclass of: SO_0000673
so part of: RFER_RS02475
location: 517335..517913
location: region:517335-517913:1
so has part: feature:517335-517913:1:exon

WP_011462823.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:517335-517913:1:exon

RFER_RS02480
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02480
old locus tag: Rfer_0499
so part of: sequence
location: 517910..518647
location: region:517910-518647:1
so has part: feature:517910-518647:1:exon
subclass of: SO_0000010

position:517910:1
position: 517910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:518647:1
position: 518647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517910-518647:1:exon

RFER_RS02480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02480
old locus tag: Rfer_0499
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012346167.1
GO function: GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c3 family protein
translation: MKRGWLMALIAANLLVLVVLIFIYPHLMVSPGPVVAAHAEIATDCFACHAPWRGASAARCVSCHVLPDIGLRTSKGVAIVQHTRKTSFHQALIEQDCMACHSDHAAPKLTQRSRKPFSHLLLKTAVREQCQGCHQAPTDKLHGQITGNCNQCHSQQAWKPATFEHDKLFLLDRDHAASCETCHSNNDYRRYTCYGCHEHSLDKIRSEHREEGIQNFENCVECHRSAKGEPENKGSGKRKDKEDDD
SIO_010081: RFER_RS02480
subclass of: SO_0000673
so part of: RFER_RS02480
location: 517910..518647
location: region:517910-518647:1
so has part: feature:517910-518647:1:exon

WP_011462824.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:517910-518647:1:exon

RFER_RS02485
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: radA
locus tag: RFER_RS02485
old locus tag: Rfer_0500
so part of: sequence
location: 518783..520147
location: region:518783-520147:1
so has part: feature:518783-520147:1:exon
subclass of: SO_0000010

position:518783:1
position: 518783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:520147:1
position: 520147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:518783-520147:1:exon

RFER_RS02485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: radA
locus tag: RFER_RS02485
old locus tag: Rfer_0500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010466975.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA repair protein RadA
translation: MAKEKTVYVCSDCGGTSPKWQGKCPSCNAWNTLIESVPESLSPTKNRFASLAKTAEIAILGDIDAVDMARTPTGHEELDRVLGGGMVEGGVVLIGGDPGIGKSTLLLQALDSLQCSGQNTLYVTGEESGAQVALRSRRLGLGHSQVRVLAEIQLEKILSVLAATQPDIAVIDSIQTVYSDQLTSAPGSVAQVRECAAHLTRAAKASGVCIVLVGHVTKEGALAGPRVLEHMVDTVLYFEGDTHSSFRLVRAIKNRFGAVNEIGVFAMTEKGLKGVSNPSAIFLSQHAEPVPGSCVMVTLEGTRPMLVEIQALVDSGGPSPRRLSVGLDKDRLAMLLAVLHRHAGVACMDQDVFVNAVGGVRISEPAADLAVLLAITSSLRGKPLPKGFFAFGEVGLAGEVRPAPRGQERLKEAAKLGFSVALVPKANAPKKPIEGLTIHAVERVEQAMEVVRGL
SIO_010081: RFER_RS02485
subclass of: SO_0000673
so part of: RFER_RS02485
location: 518783..520147
location: region:518783-520147:1
so has part: feature:518783-520147:1:exon

WP_011462825.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:518783-520147:1:exon

RFER_RS02490
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02490
old locus tag: Rfer_0501
so part of: sequence
location: complement(520194..520820)
location: region:520194-520820:-1
so has part: feature:520194-520820:-1:exon
subclass of: SO_0000010

position:520194:-1
position: 520194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:520820:-1
position: 520820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:520194-520820:-1:exon

RFER_RS02490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02490
old locus tag: Rfer_0501
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020705410.1
GO component: GO:0019867 - outer membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycine zipper 2TM domain-containing protein
translation: MKKTVWTMTCGLIFSSLAATALAQTPMLPKAQYTADSRQAQERYAADKKLCNDEASSTARLQCRRDAKSEYDKAIAAARAQLAAQTPAATSHQNATAACPDCARVIAVNVSDKKGEGSAVGLIAGGVTGAILGHQVGGGLGKDLATVAGAAGGAYAGKKIEEKVKTHKVWTVHVQYQDGRKHSFSFEQDPGFKTGDAVRNSGNSIVRQ
SIO_010081: RFER_RS02490
subclass of: SO_0000673
so part of: RFER_RS02490
location: complement(520194..520820)
location: region:520194-520820:-1
so has part: feature:520194-520820:-1:exon

WP_011462826.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:520194-520820:-1:exon

RFER_RS02495
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02495
old locus tag: Rfer_0502
so part of: sequence
location: 520969..521682
location: region:520969-521682:1
so has part: feature:520969-521682:1:exon
subclass of: SO_0000010

position:520969:1
position: 520969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:521682:1
position: 521682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:520969-521682:1:exon

RFER_RS02495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02495
old locus tag: Rfer_0502
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017453517.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0009055 - electron transfer activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome b/b6 domain-containing protein
translation: MQIFDTAKEKSQILVWDAPVRVFHWLLALSFAGAYVSAESDRWLALHVTLGYTMAGLVAFRILWGLLGTRYARFGSFVRGPLTLVRYGRAMLAGRPEHHVGHNPAGAVAIVLLLSLSMAIVATGWLFYNVPGARWLKEVHEGAAGFMLAVVALHIGGAVLTSLMHRENLVRAMINGKKEGAPNQGIRRAWRPLALLMVAAVLGFWYLQWQSPATPGLSGKGLASQDAKYRSHTHDDD
SIO_010081: RFER_RS02495
subclass of: SO_0000673
so part of: RFER_RS02495
location: 520969..521682
location: region:520969-521682:1
so has part: feature:520969-521682:1:exon

WP_011462827.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:520969-521682:1:exon

RFER_RS02500
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02500
old locus tag: Rfer_0503
so part of: sequence
location: 521756..522439
location: region:521756-522439:1
so has part: feature:521756-522439:1:exon
subclass of: SO_0000010

position:521756:1
position: 521756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522439:1
position: 522439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:521756-522439:1:exon

RFER_RS02500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02500
old locus tag: Rfer_0503
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007863958.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: winged helix-turn-helix domain-containing protein
translation: MRILLAEDDSMLGDGLRAGLRQLGFQVDWVRDGLAAERELACGDYAAAVLDLGLPLKDGIDVLQAVRASKITTPVLVLTARDAVPDRIRGLDLGADDYVVKPVDLHELGARLRSLVRRAHGQMQDVLRCGAVLLEPSARRVSLNDEPVALSTREFDLLHVLMLNADRVLSREQLEQQLYSWGYEVESNAIEVHIHHLRRKLQPDLIQTVRGIGYTVQRGSAPASAST
SIO_010081: RFER_RS02500
subclass of: SO_0000673
so part of: RFER_RS02500
location: 521756..522439
location: region:521756-522439:1
so has part: feature:521756-522439:1:exon

WP_011462828.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:521756-522439:1:exon

RFER_RS02505
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02505
old locus tag: Rfer_0504
so part of: sequence
location: 522436..523788
location: region:522436-523788:1
so has part: feature:522436-523788:1:exon
subclass of: SO_0000010

position:522436:1
position: 522436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:523788:1
position: 523788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:522436-523788:1:exon

RFER_RS02505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02505
old locus tag: Rfer_0504
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012434999.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MRTARRLKSLQARLLAPLLGLLTVVWLGAAVMIWFDASHELDELLDGHLAQAAALLIMQQAHAHEADSVEDAPSLHKYAPKVVFQVFHEGRLVLSSANAGTAPIAGNAQGFSTVRLADDAQWRVFATRGAEHDVQVYVGEQTESRDSILLAVLQGVLLPLVIALPLLALVGWWAVRQGLAPLRHLSRVLAQRRPQAMEPLLVPDLSTEMVPVVQALNGLFERIEQMLVSERRFTADAAHELRTPIAAIRAQAQVALGAGHDAAQRDHALQFTLAGCDRATHLVEQLLTLARLEAAPASAADAVARVDLSALARRVAADLAPTALARGQTLQLEAPTACQVAGDEALIGVLVRNLVDNALRYSPNQAQVWVSVAMESGQAVLRVQDSGAGMTEPEIARLGERFYRVLGSDQPGSGLGWSIVKRIATVFGAQVQVSRSERLGGLAVTVRWRR
SIO_010081: RFER_RS02505
subclass of: SO_0000673
so part of: RFER_RS02505
location: 522436..523788
location: region:522436-523788:1
so has part: feature:522436-523788:1:exon

WP_011462829.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:522436-523788:1:exon

RFER_RS02510
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02510
old locus tag: Rfer_0505
so part of: sequence
location: 523871..525274
location: region:523871-525274:1
so has part: feature:523871-525274:1:exon
subclass of: SO_0000010

position:523871:1
position: 523871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:525274:1
position: 525274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:523871-525274:1:exon

RFER_RS02510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02510
old locus tag: Rfer_0505
inference: COORDINATES: protein motif:HMM:NF014998.2
GO function: GO:0004144 - diacylglycerol O-acyltransferase activity [Evidence IEA]
GO process: GO:0045017 - glycerolipid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: wax ester/triacylglycerol synthase family O-acyltransferase
translation: MSKLSLLDLGFFIAETQASPKHVAGLLICRRPPKSTLAFAKNLYRELLTFTDVKAPFNRVIKFSLKAMPHWQYSKAVDLKQHIFYHKLAGGCNDRQALYDFVSKLHQPMLDRSRPLWEVHVIDGLEIDRKKGYFALYQKMHHACADGVTMSRWTSESMAQTPDDLELTPVWTRKHGGHGDRHKQAMQDLMHSLWKDVGGTTLRFLGIARLATMLLLESVKLTKNAIALPFVSTAKTPLTGQVTAGRQFTTAGVSLARVNQVRERTRSTINHVALTCLDGALRRYLKDQGVELQRPITIQMPVNLRKEGEKTAGNKIGIIQVELSAPTDDPYVRLRNIGFSLRSVRTMIDSVAPEAIESYTIITGLVAQIAELLQLSNTLPPMGNTLVSNVPGPKEYLYIKGAKMEEMHPISTLPPSNLLNITLFSYAGELFFGLIATDELPNLQRLGDYVQEAFTELESSVRDARAA
SIO_010081: RFER_RS02510
subclass of: SO_0000673
so part of: RFER_RS02510
location: 523871..525274
location: region:523871-525274:1
so has part: feature:523871-525274:1:exon

WP_011462830.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:523871-525274:1:exon

RFER_RS02515
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02515
old locus tag: Rfer_0506
so part of: sequence
location: 525352..526302
location: region:525352-526302:1
so has part: feature:525352-526302:1:exon
subclass of: SO_0000010

position:525352:1
position: 525352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526302:1
position: 526302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:525352-526302:1:exon

RFER_RS02515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02515
old locus tag: Rfer_0506
EC number: 2.6.1.42
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015012122.1
GO function: GO:0004084 - branched-chain-amino-acid transaminase activity [Evidence IEA]
GO process: GO:0009081 - branched-chain amino acid metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: branched-chain amino acid transaminase
translation: MSPVTPSMSDRDGKIWMDGQMVDWRDAKIHVLTHTLHYGCGVFEGVRAYNAVGGTAIFRLEDHTERLFNSAKILRMKIPFSMDEVLAAQKAVVRENKLEGGYIRPLSWIGDEKLGVSPKGNTIHLMVAAWPWGAYLGEEGMKRGIRVKTSSFTRHHVNITMTQAKAVSNYSNSILANLEVTDEGYDEALLLDCSGFVSEGPGENIFVVKDGVVYTPDLSSGALNGITRNTIFHIAKDLGLELIQKRITRDEVYICDEAFFTGTAAEVTPIRELDRIELGKGDYVGSRGPITEKIQSAYFDIVNGRNPKYAHWLSKV
SIO_010081: RFER_RS02515
subclass of: SO_0000673
so part of: RFER_RS02515
location: 525352..526302
location: region:525352-526302:1
so has part: feature:525352-526302:1:exon

WP_011462831.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:525352-526302:1:exon

RFER_RS02520
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02520
old locus tag: Rfer_0507
so part of: sequence
location: 526315..526518
location: region:526315-526518:1
so has part: feature:526315-526518:1:exon
subclass of: SO_0000010

position:526315:1
position: 526315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526518:1
position: 526518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:526315-526518:1:exon

RFER_RS02520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02520
old locus tag: Rfer_0507
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015012123.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zinc-finger domain-containing protein
translation: MNKSTVELLAADLNHQGGVFCPNPKADMKLWDSHPKVYLDVAHSGEAKCPYCGTVYKLKAGEHFAGH
SIO_010081: RFER_RS02520
subclass of: SO_0000673
so part of: RFER_RS02520
location: 526315..526518
location: region:526315-526518:1
so has part: feature:526315-526518:1:exon

WP_011462832.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:526315-526518:1:exon

RFER_RS02525
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: waaF
locus tag: RFER_RS02525
old locus tag: Rfer_0508
so part of: sequence
location: 526496..527542
location: region:526496-527542:1
so has part: feature:526496-527542:1:exon
subclass of: SO_0000010

position:526496:1
position: 526496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:527542:1
position: 527542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:526496-527542:1:exon

RFER_RS02525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: waaF
locus tag: RFER_RS02525
old locus tag: Rfer_0508
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011481179.1
GO function: GO:0008920 - lipopolysaccharide heptosyltransferase activity [Evidence IEA]
GO process: GO:0009244 - lipopolysaccharide core region biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipopolysaccharide heptosyltransferase II
translation: MSTSPGTKESGSLPHSFRSLIIAPQWIGDAVMTEPLMRRLQARGERLTVGALPWVAPVYRLMPQVAEVIELPFAHGGLQLKARRSLARQLSGRFDVAYVCPNSLKSALLPLLAGIPKRVGYLGEARVGLLTHRLKNPPKAQRPPMVAFYSALSGAADSGNDRPQLQLNPVEVDIALAALGLQRGAYDVFAPGAEYGPAKRWPTRHFAELARRLELPVVLLGSAKERDLCREIADLVNADQPGKCRNLAGETSLAQAFSVIGAAKCLVSNDSGLMHVGAALGVRQVALFGSSSPLHTPPLNDRAAVLWLKNDASYQPPLDCAPCFERECPLGHTRCLVDITADRVLLNM
SIO_010081: RFER_RS02525
subclass of: SO_0000673
so part of: RFER_RS02525
location: 526496..527542
location: region:526496-527542:1
so has part: feature:526496-527542:1:exon

WP_279587695.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:526496-527542:1:exon

RFER_RS02530
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02530
old locus tag: Rfer_0509
so part of: sequence
location: complement(527805..529088)
location: region:527805-529088:-1
so has part: feature:527805-529088:-1:exon
subclass of: SO_0000010

position:527805:-1
position: 527805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529088:-1
position: 529088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527805-529088:-1:exon

RFER_RS02530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02530
old locus tag: Rfer_0509
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015012130.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAMP domain-containing sensor histidine kinase
translation: MFFKKLYVRIWLAVVLAVAVLTLLVGWAWRLTAEPPLRNVVIRDHVGRIIGNGHSRMRRPPDVGFGENSDRAPDAQDRWLGPYSQYGNDPEFVVVMNDGQMVHLQFPRPPQSPWSRPPFGFFWTLSLVGIAVALATYPIIRKLTRRLELLQNGVEKWGEGDLSIRVPEAGADEVTFLAARFNHAAERIETLVKSHESLLASQKSLLANASHELRSPLTRIRMGLELMGSSASPAFKNEISRNISELDQLIEEILLASRLDAREADMGTIESVDLIGLAAEECARVNAELDVQLASDSSATPTEPAGPSDLPVQGVTKLLRRAMRNLLENARRHAAGEITVTLRKTDRQAVISVCDRGPGVPPELRERIFEPFYRLPGATERDGGVGLGLALVKSIALRHGGTVSCENRPDGGACFVVRLPLSPVDKV
SIO_010081: RFER_RS02530
subclass of: SO_0000673
so part of: RFER_RS02530
location: complement(527805..529088)
location: region:527805-529088:-1
so has part: feature:527805-529088:-1:exon

WP_011462834.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:527805-529088:-1:exon

RFER_RS02535
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02535
old locus tag: Rfer_0510
so part of: sequence
location: complement(529091..529795)
location: region:529091-529795:-1
so has part: feature:529091-529795:-1:exon
subclass of: SO_0000010

position:529091:-1
position: 529091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529795:-1
position: 529795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529091-529795:-1:exon

RFER_RS02535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02535
old locus tag: Rfer_0510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010467012.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator transcription factor
translation: MTQHLLMIEDDTRLAQMVSEYLAQSGFVVGHAGDGQTGLTDLQSDPPDLVILDLMLPDMDGLEVCRRIRSLPGALAQIPVLMLTAKGDPMDRIIGLEIGADDYLPKPFEPRELLARIRAVLRRHVEGAHPVQTQLRFGTLEIDRDARSVSVAGQLCDLTSYQFDLLVALAERAGRVLTRDQIMEAVRGRELDAFDRSIDVHMGRIRAAIELDAKDPKRILTVRGVGYVFARQQD
SIO_010081: RFER_RS02535
subclass of: SO_0000673
so part of: RFER_RS02535
location: complement(529091..529795)
location: region:529091-529795:-1
so has part: feature:529091-529795:-1:exon

WP_011462835.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:529091-529795:-1:exon

RFER_RS02540
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02540
old locus tag: Rfer_0511
so part of: sequence
location: complement(529864..532311)
location: region:529864-532311:-1
so has part: feature:529864-532311:-1:exon
subclass of: SO_0000010

position:529864:-1
position: 529864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532311:-1
position: 532311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529864-532311:-1:exon

RFER_RS02540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02540
old locus tag: Rfer_0511
EC number: 2.4.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020068092.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycogen/starch/alpha-glucan phosphorylase
translation: MPATAIFQFDKPTNSVEALRRSISNRLVYQVGKDLHSATQRDWLFAVFHAVRDRIMDGWRESLTQAEDQDAKRVYYLSLEFLTGRALTNAMLATDIYEPVKQACALLGADFDALIDLEPDAGLGNGGLGRLAACFLDSMATLGLPGMGYGIRYEFGMFAQRIEHGQQVEEPDYWLVNGYPWEFMRPELSYTIRYGGRLVPQNGQSLWLDTEDVIATAYDSGVPGHQMRSVVTMRLWSARASGGVNLDAFNRGDYIQAVEAKNQSENVSRVLYPDDRTEHGHELRLRQEYFFVSASLQDILRRHLKNHSGFEQLADKVAIHLNDTHPALAVPELMRLLMDEHQLDWEAAWGLCTRIFSYTNHTLMEEALETWPVELLGRVLPRHMGLIFDINARFLAEVHTRFPDDHALLRRISLIEERGVRRVRMAHLSVLSSHKVNGVSALHSQLMVDTIFSDFVRMYPERFCNKTNGITPRRWLSLANPSLSTLIDSRIGPDWRQDLDQLAQLRDLADEPEFQNAFRLAKQQNKRRLTDLMARCPGVIVDPHSLFDVQVKRMHEYKRQLLNVLHVITRYHRILAQPHANWVPRTVIFAGKAASAYYMAKLVIRLINDVARVINNDPLIGSLLRVVFIPNYRVSLAEIIIPAANLSEQISTAGTEASGTGNMKFALNGALTIGTWDGANIEIAEKVGPDNIFVFGNRAEKVAELRGYGYLPRSYYEGNFDLKFAIDRLAQGGFSPEEPGRYRDVVNVLLESDYYQLLADYGDYCACQDKVDDLYRRPGAWTRSAILNVAGMGPFSSDRTIREYATDIWGVAPLR
SIO_010081: RFER_RS02540
subclass of: SO_0000673
so part of: RFER_RS02540
location: complement(529864..532311)
location: region:529864-532311:-1
so has part: feature:529864-532311:-1:exon

WP_011462836.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:529864-532311:-1:exon

RFER_RS02545
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: glgA
locus tag: RFER_RS02545
old locus tag: Rfer_0512
so part of: sequence
location: complement(532343..533827)
location: region:532343-533827:-1
so has part: feature:532343-533827:-1:exon
subclass of: SO_0000010

position:532343:-1
position: 532343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533827:-1
position: 533827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:532343-533827:-1:exon

RFER_RS02545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: glgA
locus tag: RFER_RS02545
old locus tag: Rfer_0512
EC number: 2.4.1.21
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011462837.1
GO function: GO:0004373 - glycogen (starch) synthase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycogen synthase GlgA
translation: MKVLYVCTELFPFLKTGGLADVSAGLAPALQAVGCEVRLLLPAFPAIANQALSTRPIASLPAGPMPWGPAPVLPPASLTLATLPGLELPVYLVQAPALYDRPGNPYLGPDGKDWSDNAIRFAALGWAGATLGQGLDPHWRPDVIHCHDWHSGLTPTYVRAFAAAKQATPATVFTIHNLAYQGLFAAAEVTRLGLPKSWFDIDGFEFFGKVSFMKAALRYADRITTVSPTYAREISSEAQGCGLDGLLRERANSLSGILNGVDDLIWNPATDALLPAPYDEHKLQGKTLAKRALQTKFGLEPRANALVFGAVSRLTEQKGLHLLPQVLADMVQRGGQLALLGQGDVALERAFVDAAIRYPGQVGVRIGYDEVTAHAVIAGADVILVPSEFEPCGLTQLYGLRYGTLPLVRRVGGLADTVVDCTLENLDEGSATGFVFDELSPAGLLSAVRRAFVLFRRPDEWLAVQQRGMGLRFDWLASAQHYLAMYQTLRPGAK
SIO_010081: RFER_RS02545
subclass of: SO_0000673
so part of: RFER_RS02545
location: complement(532343..533827)
location: region:532343-533827:-1
so has part: feature:532343-533827:-1:exon

WP_011462837.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:532343-533827:-1:exon

RFER_RS02550
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: glgC
locus tag: RFER_RS02550
old locus tag: Rfer_0513
so part of: sequence
location: complement(533824..535095)
location: region:533824-535095:-1
so has part: feature:533824-535095:-1:exon
subclass of: SO_0000010

position:533824:-1
position: 533824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:535095:-1
position: 535095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533824-535095:-1:exon

RFER_RS02550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: glgC
locus tag: RFER_RS02550
old locus tag: Rfer_0513
EC number: 2.7.7.27
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011462838.1
GO function: GO:0008878 - glucose-1-phosphate adenylyltransferase activity [Evidence IEA]
GO process: GO:0005978 - glycogen biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glucose-1-phosphate adenylyltransferase
translation: MKDGAHHRPVRRTISLVLAGGRGSRLQDLTENCAKPAVHFGGKFRIIDFVLSNCVNSGLHRIGVLTQYKSHSLLRHLQHGWSFLRNEVNEFIDLLPAQQRVDEASWYRGTADAVYQNIDILREHDPKYILVLAGDHVYKMNYASLIEDHVALGAPCTVACIEVPLAEASAFGVMTVDAMRHITRFDEKPAHPQPMLDQPEQALVSMGVYVFDADYLFAALQTDIEDAASHHDFGKDLIPAIVSRGEAMAHPFDLSCVKSSPESPSYWRDVGTVDAYWAANIDLTATIPQLDLYDKDWPIWTYQPTSPPAKFVFDDEGRRGMAVDSLVSGGCIVSGALVRRSVLFTGVHLHSYSSVEESVLLPEADVGRHCRLRKVVVDEGCRIPAGMTIGFDAEDDARRFHVSADGVVLVTVAMLEALRVSQA
SIO_010081: RFER_RS02550
subclass of: SO_0000673
so part of: RFER_RS02550
location: complement(533824..535095)
location: region:533824-535095:-1
so has part: feature:533824-535095:-1:exon

WP_011462838.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:533824-535095:-1:exon

RFER_RS02555
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: malQ
locus tag: RFER_RS02555
old locus tag: Rfer_0514
so part of: sequence
location: complement(535130..536668)
location: region:535130-536668:-1
so has part: feature:535130-536668:-1:exon
subclass of: SO_0000010

position:535130:-1
position: 535130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:536668:-1
position: 536668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:535130-536668:-1:exon

RFER_RS02555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: malQ
locus tag: RFER_RS02555
old locus tag: Rfer_0514
EC number: 2.4.1.25
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012348896.1
GO function: GO:0004134 - 4-alpha-glucanotransferase activity [Evidence IEA]
GO process: GO:0005980 - glycogen catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4-alpha-glucanotransferase
translation: MSPAQAATAAIFSQRCSGVLLHLTSLPGPHGSGDLGAEAYHFVDWLVSAGQRLWQILPLSPVGPGNSPYHSPSTFAGNPLLVDLDELVKNGWLSAQEPPVFEVGRCDFERVAPYRLQRLREAWQGFLEHTQASDWTEFERFRLQQAHWLEGYAFFMALETHHGKPWTQWPTGLAQADLAALAAVGESMADELGFFSFIQWRFMVQWQRLRDYAHARGIAIVGDAPIFVAHHSADVWLNTDLFLLDPLGEATVVAGVPPDYFSVTGQRWGNPLYRWDVMAEQGFAWWKDRLSHLLELVDVIRLDHFRGFESYWEIPATEPTAVAGCWRQGPGQALFDALAQARLQQGASGLLPIIAEDLGIITQAVTDLRQNCGFPGMRVMQFAFGDTPANPYLPHNFDVQTVAYTGTHDNDTTLGWWQTAGAGQRHVARAYLGPLADFEIHWAMMQSLSQSKANTVIFPLQDVLGLDGLHRMNTPGVAQGCWQWRFAWRQVGDTPARRLKDMAHAHGRNLLR
SIO_010081: RFER_RS02555
subclass of: SO_0000673
so part of: RFER_RS02555
location: complement(535130..536668)
location: region:535130-536668:-1
so has part: feature:535130-536668:-1:exon

WP_011462839.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:535130-536668:-1:exon

RFER_RS02560
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: glgX
locus tag: RFER_RS02560
old locus tag: Rfer_0515
so part of: sequence
location: complement(536665..538884)
location: region:536665-538884:-1
so has part: feature:536665-538884:-1:exon
subclass of: SO_0000010

position:536665:-1
position: 536665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:538884:-1
position: 538884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:536665-538884:-1:exon

RFER_RS02560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: glgX
locus tag: RFER_RS02560
old locus tag: Rfer_0515
inference: COORDINATES: protein motif:HMM:TIGR02100.1
GO function: GO:0004133 - glycogen debranching enzyme activity [Evidence IEA]
GO process: GO:0005980 - glycogen catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycogen debranching protein GlgX
translation: MLTSDADALANRPGLPCKTGQSWPLGATCMTLDGQSGINFAVYSRHAEAIELCLFDEHGAQETARIRLPAHSDGVWHGFVRGLKAGQLYGLRAHGPYQPAHGQRFNPAKLLLDPFARALKGSTQHLSLERDYLGQAAADATVLNAAPDPHDNAPRMPKAQVLDLAAELQGGAAITRKPGVPLARTVLYEAHVKGLTQRHPDVPVALRGTYAGLASPPMLAHYRHLGITTLCLLPVQLFVTEAHLLQKGLRNYWGYNTLAYFVPEPAYASGQFTDDRTEFRHMVDQLHQHGLEVVLDVVFNHSAESDTFGPTLSWRGLDNASWYALDTAGQYLNFSGCGNSFNLAQPCAVQLVMDSLRWWVQAFGVDGFRFDLATALGRDPILHHDFHPMSGLLTALAQDPVLAGIKLIAEPWDLGPNGYQLGRFPARWHEWNDRFRDTSRAFWLGHHSTRGGLARRLTGSSDYFDHDGRSPLACINLLSAHDGMTLADLTSYRHKHNLANGEGNRDGQHHNLSANAGVEGPTDDVTVQSVRAQWRRALLATLFCSQGLPQLLAGDELGHSQQGNNNAYCQDNETSWLDWPGADPELTNFVGGLVHLRQTHAALRHARWFTGRATAGAGVTAADIAWRRPDGAAMAAPDWDDAQSRSFAGLIEVTDTAEASDAMPLRWLLLVHAGDEPQIFALPPGRWHTVLDSAASWVLPDAQWNSAPACTQAITAAPRTMLGLVQHVTNPVLPLEAQA
SIO_010081: RFER_RS02560
subclass of: SO_0000673
so part of: RFER_RS02560
location: complement(536665..538884)
location: region:536665-538884:-1
so has part: feature:536665-538884:-1:exon

WP_011462840.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:536665-538884:-1:exon

RFER_RS02565
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02565
old locus tag: Rfer_0516
so part of: sequence
location: complement(538923..540248)
location: region:538923-540248:-1
so has part: feature:538923-540248:-1:exon
subclass of: SO_0000010

position:538923:-1
position: 538923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540248:-1
position: 540248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:538923-540248:-1:exon

RFER_RS02565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02565
old locus tag: Rfer_0516
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016448574.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MTSSASNTPQIKPAWIDTFKVYLEPPTLRMLLLGFSAGLPLLLVLGTLSFWLREAGLDRTTIGYLSWVGLAYAFKWVWAPLVDRMPIPLLTRWMGRRRSWLLLAQLAVMAGLVAMSFNDPRVALQPVVWGALAVAFGSATQDIALDAFRIESANINRQAALAAAYQTGYRLAMIWAGAGVLWVAARAEVAGVAGYQHGAWQTAYLVMAASMLLGVLTVLLSPEPLRRAMPSAKNAREWLRGALIEPFADFLHRYGKQALLILALIAIYRISDVVMGIMANPFYVDMGYTKDEVAAVTKIFGVIMTLVGAFVGGVLSMRFGVMRVLMLGAVLSAATNLLFAALSTRGHDLTALIFVISADNLASGIASAAFIAYLSSLTNINYSATQYALFSSMMLLAPKFLAGYSGRYVDAFGYQNFFIGTSLLGLPVLLLVWLASRARQA
SIO_010081: RFER_RS02565
subclass of: SO_0000673
so part of: RFER_RS02565
location: complement(538923..540248)
location: region:538923-540248:-1
so has part: feature:538923-540248:-1:exon

WP_011462841.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:538923-540248:-1:exon

RFER_RS02570
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02570
old locus tag: Rfer_0517
so part of: sequence
location: 540349..541137
location: region:540349-541137:1
so has part: feature:540349-541137:1:exon
subclass of: SO_0000010

position:540349:1
position: 540349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541137:1
position: 541137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:540349-541137:1:exon

RFER_RS02570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02570
old locus tag: Rfer_0517
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011827694.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M48 family metallopeptidase
translation: MALTLVLPGATWPIALAREGVDVGGNSVFSNLVPAETVERSAGQQYAQLLQQAAAQHALGSKDHPQVRRLRAIANKIIPFASTWNPRASNWRWEVSLIGSKQINAFCMPGGKIAFYSGILEQLKLTDAEIATVMGHEMAHALREHARARLGKNAATGIGASLLGQVLGLGNLGQTVTNYGAQLLTLQFSRSDESDADLVGMELAARAGFDPRAGVTLWQKMAAASRGAPPQWLSTHPSGSTRISDIERNLPKVTPLYERAKQ
SIO_010081: RFER_RS02570
subclass of: SO_0000673
so part of: RFER_RS02570
location: 540349..541137
location: region:540349-541137:1
so has part: feature:540349-541137:1:exon

WP_166485795.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:540349-541137:1:exon

RFER_RS02575
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: ipdC
locus tag: RFER_RS02575
old locus tag: Rfer_0518
so part of: sequence
location: 541203..542825
location: region:541203-542825:1
so has part: feature:541203-542825:1:exon
subclass of: SO_0000010

position:541203:1
position: 541203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542825:1
position: 542825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541203-542825:1:exon

RFER_RS02575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: ipdC
locus tag: RFER_RS02575
old locus tag: Rfer_0518
EC number: 4.1.1.43
EC number: 4.1.1.74
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010465325.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: indolepyruvate/phenylpyruvate decarboxylase
translation: MNLTESLLHALKAHGARQIFGIPGDFALPYFRIIEKSAILPLYTLSHEPGVGFAADACGRISGGLGVAAVTYGAGAFNMVNAVASAYAEKSPLVVLSGGPGKGESQSGLLLHHQAKTLDSQFQIYKEITCDQVRLDDAERAPADIARALANCLRHSQPVYIEIPRDMVAEPCLPVTAQAALAVDPDALDACVTDILQRLAQASAPVLMAGVEVRRFGLEAKVAELSSRLALPVVTSFMGVGLLAQTEAPLVGTYLGVAGLPEVTQLVENSDGLFLLGVIVSDTNFAVSEKKIDLRKTIRALAGQVTMGYHTYSHIPLAALVDHLLLRVPATDKKFSVKHQSYPHGLVADAASITPTDIATAVNDLMARHGKLPIASDMGDCLFTALDIEHTALIAPGYYATMGFGVPAGLGLQAATGERPLILVGDGAFQMTGWELGNCRRYGWDPIVLLFNNASWEMLRTFQPESGFNDLDHWGFAEMAAGMGGDGVRVNTRAELKAALDKAIATRGRFQLIDITIPRGVLSETLSRFVAGVKRLSTPQ
SIO_010081: RFER_RS02575
subclass of: SO_0000673
so part of: RFER_RS02575
location: 541203..542825
location: region:541203-542825:1
so has part: feature:541203-542825:1:exon

WP_011462843.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:541203-542825:1:exon

RFER_RS02580
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02580
old locus tag: Rfer_0519
so part of: sequence
location: complement(542970..544172)
location: region:542970-544172:-1
so has part: feature:542970-544172:-1:exon
subclass of: SO_0000010

position:542970:-1
position: 542970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544172:-1
position: 544172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:542970-544172:-1:exon

RFER_RS02580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02580
old locus tag: Rfer_0519
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012748716.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0008519 - ammonium transmembrane transporter activity [Evidence IEA]
GO process: GO:0072488 - ammonium transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ammonium transporter
translation: MEALKQGADTLFILLGAVMVLAMHAGFAFLELGTVRRKNQVNALVKILVDFSVSTIAYFLVGYGVAYGTHFFVGAEQLAAKNGFELVRFFFLLTFAAAIPAIISGGIAERARFWPQLIATAVIVGFVYPFFEGIAWNQHFGVQGWIKSLTGAEFHDFAGSVVVHAVGGWVALPAVILLGARANRYRKDGGISAHPPSSIPFLALGAWVLTVGWFGFNVMSAQTLDKISGLVAVNSLMAMVGGTLAALVAGKNDPGFVHNGPLAGLVAVCAGSDLMHPLGALVVGVVAGALFVRMFTLTQNRWKIDDVLGVWPLHGLCGTWGGIAAGIFGSQALGGLGGVNLGAQLIGTAMGVAWAVAGGLLVYGGLKAVMGLRLSQEEEYNGADLSIHMISATAEREVNW
SIO_010081: RFER_RS02580
subclass of: SO_0000673
so part of: RFER_RS02580
location: complement(542970..544172)
location: region:542970-544172:-1
so has part: feature:542970-544172:-1:exon

WP_011462844.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:542970-544172:-1:exon

RFER_RS02585
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02585
old locus tag: Rfer_0520
so part of: sequence
location: 544383..544946
location: region:544383-544946:1
so has part: feature:544383-544946:1:exon
subclass of: SO_0000010

position:544383:1
position: 544383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544946:1
position: 544946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544383-544946:1:exon

RFER_RS02585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02585
old locus tag: Rfer_0520
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019431062.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TMEM165/GDT1 family protein
translation: MDAFLVSTGIVALAEMGDKTQLLALLLAVRFRRPWPIVLGIFVATLANHALAGAVGAWVTTVLGPDVLRWVLGGSFIAMAVWMLIPDKMDDDETGAAPRFGVFGTTVIAFFLAEMGDKTQVATVMLAAQYHAYFSVIAGTTLGMMLANAPVVWLGERMTRLLPLRAVHIVSALIFLGLGLAALLGWI
SIO_010081: RFER_RS02585
subclass of: SO_0000673
so part of: RFER_RS02585
location: 544383..544946
location: region:544383-544946:1
so has part: feature:544383-544946:1:exon

WP_011462845.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:544383-544946:1:exon

RFER_RS23895
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS23895
old locus tag: Rfer_0521
so part of: sequence
location: complement(545013..545180)
location: region:545013-545180:-1
so has part: feature:545013-545180:-1:exon
subclass of: SO_0000010

position:545013:-1
position: 545013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545180:-1
position: 545180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:545013-545180:-1:exon

RFER_RS23895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS23895
old locus tag: Rfer_0521
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007828646.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKEFRTEAERKASPRPVAPKGVCYTAGHGQMRSLERGTATNNKKNPGKRCKKGG
SIO_010081: RFER_RS23895
subclass of: SO_0000673
so part of: RFER_RS23895
location: complement(545013..545180)
location: region:545013-545180:-1
so has part: feature:545013-545180:-1:exon

WP_011462846.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:545013-545180:-1:exon

RFER_RS02590
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02590
old locus tag: Rfer_0522
so part of: sequence
location: complement(545258..545581)
location: region:545258-545581:-1
so has part: feature:545258-545581:-1:exon
subclass of: SO_0000010

position:545258:-1
position: 545258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545581:-1
position: 545581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:545258-545581:-1:exon

RFER_RS02590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02590
old locus tag: Rfer_0522
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011483279.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6172 family protein
translation: MKKTFKLDIEGKNRDRVLEATKHEIRKYVKRQRRVPLPEGVDYWDFDCKFGSNEANAAVVHFATITSLIDALAKDGGAEFYLELLAKPGHRAARAAGAEPSDQADRD
SIO_010081: RFER_RS02590
subclass of: SO_0000673
so part of: RFER_RS02590
location: complement(545258..545581)
location: region:545258-545581:-1
so has part: feature:545258-545581:-1:exon

WP_041790061.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:545258-545581:-1:exon

RFER_RS02595
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02595
old locus tag: Rfer_0523
so part of: sequence
location: complement(545691..547379)
location: region:545691-547379:-1
so has part: feature:545691-547379:-1:exon
subclass of: SO_0000010

position:545691:-1
position: 545691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547379:-1
position: 547379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:545691-547379:-1:exon

RFER_RS02595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02595
old locus tag: Rfer_0523
EC number: 1.3.8.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009856909.1
GO function: GO:0003995 - acyl-CoA dehydrogenase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: isovaleryl-CoA dehydrogenase
translation: MNSRMNPAPNSLYLADTHELSNLSTELCDYNMYTQDAALREAVQREGGQWAEGELSEFGQMTGSADYLELGNLANKFQPEFDTHDRFGNRIDLVKFHPSYHQLMKTSIEHGLHASPWTAPRAGAHVARAAKSFLHGQVEAGHGCPITMTFAAVPALRLQSDLASVWEPKVTARVYDPRNVPVEQKQGVTIGMAMTEKQGGSDVRTNSTRAYPVGTGGPGQAYELVGHKYFVSAPMCDAFLVLAQAPGGLSCFLLPRWRPDGSKNPMQVLRLKKKMGNASNASSETELRGALAWMVGEEGRGVRNIIEMVSMTRFDCMIGSSAGMRMAASQALHHCSVRSAFGQVLNQQPLMQNVLADLALESEAATTLTMRMARAMDNRFEEQEDLLVRLVTAVGKYWICKRTPNHAYEAMECIGGSGVMEDSMMPRLYREAPVNTIWEGSGNVQCLDVLRALSKTPAVVDAFFAEVNQARGAQALLDRHIAALATDLKDLADFEYRARDVVDRMALALQASLLVRHAPAFVSDAFCESRLGQVGQHNYGTLPRGVDAGAIIARATPRIARA
SIO_010081: RFER_RS02595
subclass of: SO_0000673
so part of: RFER_RS02595
location: complement(545691..547379)
location: region:545691-547379:-1
so has part: feature:545691-547379:-1:exon

WP_011462848.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:545691-547379:-1:exon

RFER_RS02600
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02600
old locus tag: Rfer_0524
so part of: sequence
location: complement(547372..548217)
location: region:547372-548217:-1
so has part: feature:547372-548217:-1:exon
subclass of: SO_0000010

position:547372:-1
position: 547372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548217:-1
position: 548217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:547372-548217:-1:exon

RFER_RS02600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02600
old locus tag: Rfer_0524
inference: COORDINATES: protein motif:HMM:NF019829.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PaaX family transcriptional regulator C-terminal domain-containing protein
translation: MKVNPKNLVLDLMLATGDKPMAARDAILAGALFNISENSLRVTLARLSAAGLIEAAERGAYRLGPAATDLAGEVATWRTMESRLRAWQGSHIVVHCGALGRSDRAAPQRRERALQMMGLRLLERGLYIRPDNIESDLDEVRQRLFKLGLDHNAAVFRASGLDPAREAVVHQLWNGQALTRTYRQLRAELEAWLARANQLPLDAAARESFLLGGKAIHQLVFDPLLPEPFVDTRERHAFIQAVHHFDEAGRAIWNRFFASVADTPPALHLTPQPAELETINE
SIO_010081: RFER_RS02600
subclass of: SO_0000673
so part of: RFER_RS02600
location: complement(547372..548217)
location: region:547372-548217:-1
so has part: feature:547372-548217:-1:exon

WP_011462849.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:547372-548217:-1:exon

RFER_RS02605
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02605
old locus tag: Rfer_0525
so part of: sequence
location: complement(548359..549528)
location: region:548359-549528:-1
so has part: feature:548359-549528:-1:exon
subclass of: SO_0000010

position:548359:-1
position: 548359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:549528:-1
position: 549528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548359-549528:-1:exon

RFER_RS02605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02605
old locus tag: Rfer_0525
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019658308.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phospholipase A
translation: MNPLCTTILIATCAVTTGARGQNNINVSAGPAAWQTCANLTGDSEARLICFDRWAAQQAGAAASRAPSPGASALAQTPATPALAPVAPAPVTITMEAPAAHNCKNKLFSELSRFWELEAGSDCGTFGIRGFHPISLSWIGSDSVNTQPSSPAPDHTAAEALGYGNNEVRIQLSVRTKIAQGLLTGQQELKRDSLWFGYSQQSNWQIFSGDLSRPFRTTDHEPELTYIYPTDVPLPLGWRLRYSGLSLVHQSNGQPLPLSRSWNRNVLMAGMEKGNQFRVDAKLWKRVNENLANDDNPDISNKIGRAEVAAFWTPNQDNTLGVTLRHSLRADANGSVRLEWLRQLTSSGLPGSQDALRFHTQLFSGYGDSLVDYNRRRTVLSIGLSLVDW
SIO_010081: RFER_RS02605
subclass of: SO_0000673
so part of: RFER_RS02605
location: complement(548359..549528)
location: region:548359-549528:-1
so has part: feature:548359-549528:-1:exon

WP_244095788.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:548359-549528:-1:exon

RFER_RS02610
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02610
old locus tag: Rfer_0526
pseudo: true
so part of: sequence
location: complement(549590..>551362)
location: region:549590-551362:-1
so has part: feature:549590-551362:-1:exon
subclass of: SO_0000010

position:549590:-1
position: 549590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551362:-1
position: 551362
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:549590-551362:-1:exon

RFER_RS02610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02610
old locus tag: Rfer_0526
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013539203.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: 3'-5' exonuclease
SIO_010081: RFER_RS02610
subclass of: SO_0000673
so part of: RFER_RS02610
location: complement(549590..>551362)
location: region:549590-551362:-1
so has part: feature:549590-551362:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:549590-551362:-1:exon

RFER_RS02615
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02615
old locus tag: Rfer_0527
so part of: sequence
location: 551325..552383
location: region:551325-552383:1
so has part: feature:551325-552383:1:exon
subclass of: SO_0000010

position:551325:1
position: 551325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552383:1
position: 552383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:551325-552383:1:exon

RFER_RS02615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02615
old locus tag: Rfer_0527
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011800063.1
GO component: GO:0009279 - cell outer membrane [Evidence IEA]
GO function: GO:0015288 - porin activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: porin
translation: MVHCQLRAVLAASGASFAQSSVTLYGIADVYLGNTKLTGHDGVSTTTNSLGSGGVSTDRWGFKGSEDLGGGLKANFLLEQGFNIDTGAAKGTGNNAAGLPVAGAQGFARQSYVGFSGGFGEVKLGKMWTAFDDVNGATDAVFDSALSPMYYVFTSTNYNANPGNSVYYTTPTFSGFSGTVSYGLGENKTAAQNAGSNAAFNVQYTGGPVYVALGYQSEKDNGNVSSRDFTRVNASYDLGVVKLMGNLGRTKANDKSTNEWQLGVDYPVGSALTLSASYAASKGGVLTTFAPTAAGTADVKRTGFGIGASYSLSKRTSLYGGYMAAKEEANANFVGTADAETKLFAVGLRHAF
SIO_010081: RFER_RS02615
subclass of: SO_0000673
so part of: RFER_RS02615
location: 551325..552383
location: region:551325-552383:1
so has part: feature:551325-552383:1:exon

WP_011462851.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:551325-552383:1:exon

RFER_RS02620
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02620
old locus tag: Rfer_0528
so part of: sequence
location: 552646..553662
location: region:552646-553662:1
so has part: feature:552646-553662:1:exon
subclass of: SO_0000010

position:552646:1
position: 552646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553662:1
position: 553662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:552646-553662:1:exon

RFER_RS02620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02620
old locus tag: Rfer_0528
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008115527.1
GO component: GO:0009279 - cell outer membrane [Evidence IEA]
GO function: GO:0015288 - porin activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: porin
translation: MKKSLIALAVLAASGAAMAQSSVTLYGVADVGFAHEDNGSTSVNRMDSGNLNGSRWGLKGSEDLGGGLKAIFTLEAGFSLDTGAQADAASFFNRQSFVGVSSNFGTVKLGRQMNPVYATASTWDSFGDALAGDSSHLFSYNGSRTNNMISYNYSANGFYGELQYGLGEVAGNNSITGDNSAGRSAAMFVGYMRGPFDVVLTHQNIHNSGPYTTATKMTLLGGNYDFGVVKLFAAYAVEKTLGVGAKDQKDAHLGLTAPVGTAGTVELSYLRKKDDLVSNANAHQVAVGYVHTLSKRTALYTSYAQMSNESAAAYSAGKLVVPAGNSDKVFDIGVRHSF
SIO_010081: RFER_RS02620
subclass of: SO_0000673
so part of: RFER_RS02620
location: 552646..553662
location: region:552646-553662:1
so has part: feature:552646-553662:1:exon

WP_011462852.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:552646-553662:1:exon

RFER_RS02625
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: thiL
locus tag: RFER_RS02625
old locus tag: Rfer_0529
so part of: sequence
location: complement(553812..554819)
location: region:553812-554819:-1
so has part: feature:553812-554819:-1:exon
subclass of: SO_0000010

position:553812:-1
position: 553812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:554819:-1
position: 554819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:553812-554819:-1:exon

RFER_RS02625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: thiL
locus tag: RFER_RS02625
old locus tag: Rfer_0529
EC number: 2.7.4.16
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013520807.1
GO function: GO:0009030 - thiamine-phosphate kinase activity [Evidence IEA]
GO process: GO:0009228 - thiamine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thiamine-phosphate kinase
translation: MGEFELIERYFKRPERHAARVALGIGDDCALLQPAPGTQLAISCDMLVEGRHFVSTLDPFKLGHKALAVNLSDLAACGARPLAFSLALALPRADESWLAPFAQGLLALADAHSCELIGGDTTQGPLNICITVFGEVPVMAGRSQALLRSGAQAGDDLYISGNLGDARLALEVFRGTVSVPEAVFTAARVRLETPTPRVALGLALRGVANAAIDVSDGLLGDLGHILQQSGVGATVDADVATSLIAAHAYYTGATGQFDTNIAPEQWRRWALSGGDDYELLFTAPVARREAVAAAAAASLTPVTRIGQIEAERGLRLMDAQRQPVPDRYASFDHFA
SIO_010081: RFER_RS02625
subclass of: SO_0000673
so part of: RFER_RS02625
location: complement(553812..554819)
location: region:553812-554819:-1
so has part: feature:553812-554819:-1:exon

WP_011462853.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:553812-554819:-1:exon

RFER_RS02630
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02630
old locus tag: Rfer_0530
so part of: sequence
location: complement(554822..556876)
location: region:554822-556876:-1
so has part: feature:554822-556876:-1:exon
subclass of: SO_0000010

position:554822:-1
position: 554822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556876:-1
position: 556876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:554822-556876:-1:exon

RFER_RS02630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02630
old locus tag: Rfer_0530
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011803822.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific recombinase
translation: MTQKLDLAELLDALDPQAHLAHRHLWLIDLLRWVRGGRDSVPHAVARMTLLLDTLQQRPDARAKLQAWWRVLLSTVDATALLADYGFSSRSAFASELAERLRLKWLPGTPETVDASALFSLVLCDAFDAQWISALDDATLMRLSELLQLSCLDAGNDNCAWVPQVKQGSVSPWQATLLEALTFCTSQIRATGFSPELRLRMSAPALETAPFHALDGDIMALQVAFLASPHVNSAERQDALQRYLSRLEACRQAAASVYTHLDANGISVNLVFQLRQLRERVLRVRALLDCLLAANPQASTARLLAHLVLVGQARRSLRALIASNSSMLAAKVAERSSETGEHYITRTRAEYGAMLRDAAGGGAVMSLTTLFKFMVLSLGLSAFWSGFYAGLNYALSFVLIQLLHWTVATKQPAMTAPAMAAKLKDLDEPGAIDLFVDEVTHLVRSQVAAVVGNLALVAPCVVLISAALWFTLGKPMIDVKEAEHVLHTLHVFGPTALFAALTGVLLFASSIIAGWVENWFVLHRLDSALRYNPKITAALGIARAGRWAQFMRDNISGLAANVSLGLMLGLVPAFAAFFGLGLEVRHVTLSTGQLAAAAASLGLAVLQQSAFWWCVVGIVVTAVLNVGVSFYFAFRLALRAHNIGGIDRSRIRTAIRARWRHAPLSFFLPAKETIPTPPANDKVD
SIO_010081: RFER_RS02630
subclass of: SO_0000673
so part of: RFER_RS02630
location: complement(554822..556876)
location: region:554822-556876:-1
so has part: feature:554822-556876:-1:exon

WP_011462854.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:554822-556876:-1:exon

RFER_RS02635
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: apaG
locus tag: RFER_RS02635
old locus tag: Rfer_0531
so part of: sequence
location: complement(556888..557280)
location: region:556888-557280:-1
so has part: feature:556888-557280:-1:exon
subclass of: SO_0000010

position:556888:-1
position: 556888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:557280:-1
position: 557280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:556888-557280:-1:exon

RFER_RS02635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: apaG
locus tag: RFER_RS02635
old locus tag: Rfer_0531
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011485342.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Co2+/Mg2+ efflux protein ApaG
translation: MSQYQFRVEVESRYLADQSAPQQDLYVFAYTITIINVGQVSAQLISRTWNVNDANGHTERVKGLGVVGQQPLLKPGEAFEYTSGTRLRTPTGTMHGSFFCVAEDGEKFDVDVPMFVLDGLSPSGGARTLH
SIO_010081: RFER_RS02635
subclass of: SO_0000673
so part of: RFER_RS02635
location: complement(556888..557280)
location: region:556888-557280:-1
so has part: feature:556888-557280:-1:exon

WP_011462855.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:556888-557280:-1:exon

RFER_RS02640
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: rpe
locus tag: RFER_RS02640
old locus tag: Rfer_0532
so part of: sequence
location: 557391..558074
location: region:557391-558074:1
so has part: feature:557391-558074:1:exon
subclass of: SO_0000010

position:557391:1
position: 557391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558074:1
position: 558074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:557391-558074:1:exon

RFER_RS02640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: rpe
locus tag: RFER_RS02640
old locus tag: Rfer_0532
EC number: 5.1.3.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011485341.1
GO function: GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]
GO process: GO:0006098 - pentose-phosphate shunt [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribulose-phosphate 3-epimerase
translation: MTYRIAPSILSADFARLGEELSHVIAAGCDWIHFDVMDNHYVPNLTFGPMICGALKPHAKTAGGVAVPIDVHLMVQPVDALASAFADAGADLISFHPDASGHVHRSIQAIKAKGCKAGLVFNPAEPLDVLDWVIDDIDLILIMSVNPGFGGQSFIDSALRKIEDVRRRITACGKDIRLEVDGGVKVDNIRRVADAGADTFVAGSAIFGQPDYKSVVDAMRLALGTAA
SIO_010081: RFER_RS02640
subclass of: SO_0000673
so part of: RFER_RS02640
location: 557391..558074
location: region:557391-558074:1
so has part: feature:557391-558074:1:exon

WP_041790065.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:557391-558074:1:exon

RFER_RS02645
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02645
old locus tag: Rfer_0533
so part of: sequence
location: complement(558088..558591)
location: region:558088-558591:-1
so has part: feature:558088-558591:-1:exon
subclass of: SO_0000010

position:558088:-1
position: 558088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:558591:-1
position: 558591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558088-558591:-1:exon

RFER_RS02645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02645
old locus tag: Rfer_0533
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020226853.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTALLSLWWLRIATFLLAALAAASATYWVLKWQATVPASLTAAVVYTAPPAADPQVVARLLGGGQTSVSAKLVDSAASHFKLSGVLANRASDSYALISVDGKPAKPYRVGAHVNDELVLHSVAPRSASLAISLDAPVSVTLELPKLTQAQTQAPTRPAPAKAPTEE
SIO_010081: RFER_RS02645
subclass of: SO_0000673
so part of: RFER_RS02645
location: complement(558088..558591)
location: region:558088-558591:-1
so has part: feature:558088-558591:-1:exon

WP_011462857.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:558088-558591:-1:exon

RFER_RS02650
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: gspG
locus tag: RFER_RS02650
old locus tag: Rfer_0534
so part of: sequence
location: 558663..559085
location: region:558663-559085:1
so has part: feature:558663-559085:1:exon
subclass of: SO_0000010

position:558663:1
position: 558663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:559085:1
position: 559085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558663-559085:1:exon

RFER_RS02650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: gspG
locus tag: RFER_RS02650
old locus tag: Rfer_0534
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019576461.1
GO component: GO:0015627 - type II protein secretion system complex [Evidence IEA]
GO process: GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II secretion system major pseudopilin GspG
translation: MRRRLQAGFTLIELMVVLLIIGVLAALIVPNVLDRADDARVTAAKTDVNNLMQALKLYRLDNQRYPTAEQGLQALLTKPTTAPVPPNWKSYLDLLPNDPWGKPYVYLNPGIKGEVDVMSLGADGQAGGEGKNADIGSWQP
SIO_010081: RFER_RS02650
subclass of: SO_0000673
so part of: RFER_RS02650
location: 558663..559085
location: region:558663-559085:1
so has part: feature:558663-559085:1:exon

WP_166485639.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:558663-559085:1:exon

RFER_RS02655
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02655
old locus tag: Rfer_0535
so part of: sequence
location: 559132..559599
location: region:559132-559599:1
so has part: feature:559132-559599:1:exon
subclass of: SO_0000010

position:559132:1
position: 559132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:559599:1
position: 559599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:559132-559599:1:exon

RFER_RS02655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02655
old locus tag: Rfer_0535
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016450872.1
GO component: GO:0015627 - type II protein secretion system complex [Evidence IEA]
GO process: GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GspH/FimT family pseudopilin
translation: MTKTSTNRGFTLLELLVVVAVIAMASAGVGFAMRDTSQVQLERDAERLAALLESARARSRVSGVPVRWRATPTGFRFEGLAPSAQPDSDLPEQWLDPDTRVADGPATAPALTLLLGPDPIIEPQQVELTSRTQPGKSVRLATDGVRPFAVLAGVP
SIO_010081: RFER_RS02655
subclass of: SO_0000673
so part of: RFER_RS02655
location: 559132..559599
location: region:559132-559599:1
so has part: feature:559132-559599:1:exon

WP_011462859.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:559132-559599:1:exon

RFER_RS02660
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: gspI
locus tag: RFER_RS02660
old locus tag: Rfer_0536
so part of: sequence
location: 559596..559976
location: region:559596-559976:1
so has part: feature:559596-559976:1:exon
subclass of: SO_0000010

position:559596:1
position: 559596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:559976:1
position: 559976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:559596-559976:1:exon

RFER_RS02660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: gspI
locus tag: RFER_RS02660
old locus tag: Rfer_0536
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011804125.1
GO component: GO:0015627 - type II protein secretion system complex [Evidence IEA]
GO process: GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II secretion system minor pseudopilin GspI
translation: MNSARQPQRHGARGFTLVEVLVALGIVAIALLAGLQATAALTRNAQRQSDVLLAQTCAENELVKVRLARQLPDVGDSSIACEQAGEVFTVALAVRPTPNFNFRRVDAQVFKGDDAVLRLSTVAGRY
SIO_010081: RFER_RS02660
subclass of: SO_0000673
so part of: RFER_RS02660
location: 559596..559976
location: region:559596-559976:1
so has part: feature:559596-559976:1:exon

WP_011462860.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:559596-559976:1:exon

RFER_RS02665
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
locus tag: RFER_RS02665
old locus tag: Rfer_0537
so part of: sequence
location: 559976..560656
location: region:559976-560656:1
so has part: feature:559976-560656:1:exon
subclass of: SO_0000010

position:560656:1
position: 560656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:559976-560656:1:exon

RFER_RS02665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
locus tag: RFER_RS02665
old locus tag: Rfer_0537
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015012572.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: prepilin-type N-terminal cleavage/methylation domain-containing protein
translation: MTHPGLPRLRVKGFTLIELLVAISLMALMAALSWRGLDGMTRAQTQMRRHSDDVLTLQAGLAQWGADLDALATQPNTPSLDWDGRALRLLRASTAMPGEGLRVVAWSRRTIDGAGQWLRWQSPPLTTRAQLQLAWQQAALWGQNPSDEARTREVRVAALDQWQIFYFRDNAWSNPLSSAGASGAAQAATAALIPDGVRLELTLSAGQAISGRVTRDWVRPTLGSGK
SIO_010081: RFER_RS02665
subclass of: SO_0000673
so part of: RFER_RS02665
location: 559976..560656
location: region:559976-560656:1
so has part: feature:559976-560656:1:exon

WP_011462861.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:559976-560656:1:exon

RFER_RS02670
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: gspK
locus tag: RFER_RS02670
old locus tag: Rfer_0538
so part of: sequence
location: 560653..561630
location: region:560653-561630:1
so has part: feature:560653-561630:1:exon
subclass of: SO_0000010

position:560653:1
position: 560653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561630:1
position: 561630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:560653-561630:1:exon

RFER_RS02670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: gspK
locus tag: RFER_RS02670
old locus tag: Rfer_0538
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013902881.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II secretion system minor pseudopilin GspK
translation: MKSQRGAAILTAMLTVVLVASLASATLWQQWRGVEVEAAERSRMQSAWILSGALDWARLILREDGRKGGADHLAEPWAVPLEQARLSSFLAADRSDTQAADAAQEAFLSGQITDLQSRLNVANLVQNGAIDVDSERAFTRLFEVLDLPETELVLLLDKLRLAQGAPAGAAVAAAPLDAPDAASITLWPQTIDQLAWFGLSAHSIAVLRPFITILPVRTPVNLNTAAAEVIYACVEGFDLADAHRLVRERNAIHLATLSDASKISGKTSVQFNAALHSVSSRFFEVRGDLRIDQATVQEVSVVQRDGLEVKTLSRQRVASSSPTLQ
SIO_010081: RFER_RS02670
subclass of: SO_0000673
so part of: RFER_RS02670
location: 560653..561630
location: region:560653-561630:1
so has part: feature:560653-561630:1:exon

WP_011462862.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:560653-561630:1:exon

RFER_RS02675
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: gspL
locus tag: RFER_RS02675
old locus tag: Rfer_0539
so part of: sequence
location: 561657..562886
location: region:561657-562886:1
so has part: feature:561657-562886:1:exon
subclass of: SO_0000010

position:561657:1
position: 561657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562886:1
position: 562886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:561657-562886:1:exon

RFER_RS02675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: gspL
locus tag: RFER_RS02675
old locus tag: Rfer_0539
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018903569.1
GO component: GO:0015627 - type II protein secretion system complex [Evidence IEA]
GO process: GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II secretion system protein GspL
translation: MTTLIVTLPAEPLDAAALYDYVLTRDGSTVAEQSRAPLALLPLVGKADCEVVALVSAQRLSWHQVQLPKGTLGRRLFQDGGALRVRAVLDGLLEDRLLDDTEQLHFALEPQPPTDAPVWVAVCERAWLRAALQVLEQSGRAVSRIVPEFTPQALTNTLYVTGEADAAYLVGAAEGSVAVLPLSREAMALLAGSEEKNVVAEPAVVASAEALFQRPVTLQQSALRQLQAAQSAWDLAQFDLVTSQSARTWKRWAGAARGLLSAPRWRAARLAVLALLIINLAGLNAWAWKEKSLLNSQRQAIQAVLTTTFPQVRVVVDAPTQMAREVATLQQASGAPSGRDLESMLGAFGAVAPVNAVPEAIEYVAGEARLKGLKLTAEQLTAIASQLKPQGYAVNVEADNVVIKQVAAL
SIO_010081: RFER_RS02675
subclass of: SO_0000673
so part of: RFER_RS02675
location: 561657..562886
location: region:561657-562886:1
so has part: feature:561657-562886:1:exon

WP_041790067.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:561657-562886:1:exon

RFER_RS02680
type: Gene
subclass of: SO_0000704
RO_0002162: 338969
gene: gspM
locus tag: RFER_RS02680
old locus tag: Rfer_0540
so part of: sequence
location: 562883..563380
location: region:562883-563380:1
so has part: feature:562883-563380:1:exon
subclass of: SO_0000010

position:562883:1
position: 562883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:563380:1
position: 563380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:562883-563380:1:exon

RFER_RS02680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338969
gene: gspM
locus tag: RFER_RS02680
old locus tag: Rfer_0540
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011482276.1
GO component: GO:0015627 - type II protein secretion system complex [Evidence IEA]
GO process: GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II secretion system protein GspM
translation: MKLLSELQARWRLLARREQRLLLAALALVLLTLLWSLALAPALATLKAAQQQRLVLDAQWQQMQRLQAQAKVLQAQPPLSFADARRLLEASIKPLGATAQLVVAGERVTLSFKGISADALAQWLAQVRLTARAVPSEARLVRGAAVVGGAPGGWNGTLVLSLSAR
SIO_010081: RFER_RS02680
subclass of: SO_0000673
so part of: RFER_RS02680
location: 562883..563380
location: region:562883-563380:1
so has part: feature:562883-563380:1:exon