Pelobacter propionicus DSM 2379 plasmid pPRO2, complete sequence.
type: Entry
definition: Pelobacter propionicus DSM 2379 plasmid pPRO2, complete sequence.
sequence version: NC_008608.1
sequence date: 2022-12-28
sequence: sequence
division: CON
label: NC_008608.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02598297
keyword: RefSeq
source: Pelobacter propionicus DSM 2379
organism: Pelobacter propionicus DSM 2379
taxonomy: Bacteria; Thermodesulfobacteriota; Desulfuromonadia; Desulfuromonadales; Desulfuromonadaceae; Pelobacter.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP000484.1.\nURL -- http://www.jgi.doe.gov\nJGI Project ID: 3436113\nSource DNA available from Derek Lovley (dlovley@bio.umass.edu)\nBacteria available from DSMZ: DSM 2379\nContacts: Derek Lovley (dlovley@bio.umass.edu)\n Paul Richardson (microbes@cuba.jgi-psf.org)\nQuality assurance done by JGI-Stanford\nAnnotation done by JGI-ORNL and JGI-PGF\nFinishing done by JGI-LANL\nFinished microbial genomes have been curated to close all gaps with\ngreater than 98% coverage of at least two independent clones. Each\nbase pair has a minimum q (quality) value of 30 and the total error\nrate is less than one per 50000.\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. It is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/28/2022 01:23:01\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,927\nCDSs (total) :: 3,858\nGenes (coding) :: 3,833\nCDSs (with protein) :: 3,833\nGenes (RNA) :: 69\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 53\nncRNAs :: 4\nPseudo Genes (total) :: 25\nCDSs (without protein) :: 25\nPseudo Genes (ambiguous residues) :: 0 of 25\nPseudo Genes (frameshifted) :: 0 of 25\nPseudo Genes (incomp…

sequence
subclass of: SO_0000155
sequence length: 30722
topology: circular
so has quality: SO_0000988
location: 1..30722
location: region:1-30722:1
RO_0002162: 338966

NC_008608
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02598297
type: BioSample
SIO_000068: biosample

1
title: Complete sequence of plasmid pPRO2 of Pelobacter propionicus DSM 2379
author: Copeland, A.
author: Lucas, S.
author: Lapidus, A.
author: Barry, K.
author: Detter, J.C.
author: Glavina del Rio, T.
author: Hammon, N.
author: Israni, S.
author: Dalin, E.
author: Tice, H.
author: Pitluck, S.
author: Saunders, E.
author: Brettin, T.
author: Bruce, D.
author: Han, C.
author: Tapia, R.
author: Schmutz, J.
author: Larimer, F.
author: Land, M.
author: Hauser, L.
author: Kyrpides, N.
author: Kim, E.
author: Lovley, D.
author: Richardson, P.
journal: Unpublished

2
title: Direct Submission
author: Copeland, A.
author: Lucas, S.
author: Lapidus, A.
author: Barry, K.
author: Detter, J.C.
author: Glavina del Rio, T.
author: Hammon, N.
author: Israni, S.
author: Dalin, E.
author: Tice, H.
author: Pitluck, S.
author: Saunders, E.
author: Brettin, T.
author: Bruce, D.
author: Han, C.
author: Tapia, R.
author: Schmutz, J.
author: Larimer, F.
author: Land, M.
author: Hauser, L.
author: Kyrpides, N.
author: Kim, E.
author: Lovley, D.
author: Richardson, P.
journal: Submitted (31-OCT-2006) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30722:1
position: 30722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-30722:1:source
so part of: sequence
organism: Pelobacter propionicus DSM 2379
mol type: genomic DNA
strain: DSM 2379
type material: type strain of Pelobacter propionicus
plasmid: pPRO2

338966
type: Taxonomy
SIO_000068: taxonomy

PPRO_RS19930
type: Gene
subclass of: SO_0000704
RO_0002162: 338966
locus tag: PPRO_RS19930
so part of: sequence
location: complement(join(30651..30722,1..138))
location: region:1-30722:-1
so has part: feature:1-138:-1:exon
so has part: feature:30651-30722:-1:exon
subclass of: SO_0000010

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30722:-1
position: 30722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-138:-1:exon

position:138:-1
position: 138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:30651-30722:-1:exon

position:30651:-1
position: 30651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPRO_RS19930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338966
locus tag: PPRO_RS19930
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKIERIVDMIEADESNVAMLSSGEQIAAALLFNRMDWLPDDYKHPLDAIDRLGDDWLHKVMDYHRSHS
SIO_010081: PPRO_RS19930
subclass of: SO_0000673
so part of: PPRO_RS19930
location: complement(join(30651..30722,1..138))
location: region:1-30722:-1
so has part: feature:1-138:-1:exon
so has part: feature:30651-30722:-1:exon

WP_049759864.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-138:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:30651-30722:-1:exon

PPRO_RS19015
type: Gene
subclass of: SO_0000704
RO_0002162: 338966
locus tag: PPRO_RS19015
old locus tag: Ppro_3826
so part of: sequence
location: complement(125..490)
location: region:125-490:-1
so has part: feature:125-490:-1:exon
subclass of: SO_0000010

position:125:-1
position: 125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:490:-1
position: 490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125-490:-1:exon

PPRO_RS19015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338966
locus tag: PPRO_RS19015
old locus tag: Ppro_3826
inference: COORDINATES: protein motif:HMM:NF018152.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraD
translation: MTEAIEKKKTRLEKLAEQKAAIEAKLKAERERLSLQQRKARTAENAKLRKAQNQEKYAYGGLCEIAGLLGTDRGAVLGVLLWASELFKKEPEKIASFKKRGDAILTQREAARKQGVRREED
SIO_010081: PPRO_RS19015
subclass of: SO_0000673
so part of: PPRO_RS19015
location: complement(125..490)
location: region:125-490:-1
so has part: feature:125-490:-1:exon

WP_011733933.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:125-490:-1:exon

PPRO_RS19020
type: Gene
subclass of: SO_0000704
RO_0002162: 338966
locus tag: PPRO_RS19020
old locus tag: Ppro_3827
so part of: sequence
location: 704..1408
location: region:704-1408:1
so has part: feature:704-1408:1:exon
subclass of: SO_0000010

position:704:1
position: 704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1408:1
position: 1408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:704-1408:1:exon

PPRO_RS19020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338966
locus tag: PPRO_RS19020
old locus tag: Ppro_3827
inference: COORDINATES: protein motif:HMM:NF015354.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobA/MobL family protein
translation: MATYHCSVKHGSKGNGASSAAKADYICREGKYADKPDLEYKESGNMPEWAQASPRVFWHAGDQCERANGRVYTEIETALPREISPDHRRELVQNFIREQLSGHPYTVAIHNPKATLDGGDQPHAHIIFSERKLDGIERNQEQFFKRANAKEPEKGGTAKDRTWNEREKVQQIREAWEGHYNRYSPERVSCRSLREQGIGREPERHLGPKMARPEAPEAGKVMEGSSQKTENKAR
SIO_010081: PPRO_RS19020
subclass of: SO_0000673
so part of: PPRO_RS19020
location: 704..1408
location: region:704-1408:1
so has part: feature:704-1408:1:exon

WP_011733934.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:704-1408:1:exon

PPRO_RS19025
type: Gene
subclass of: SO_0000704
RO_0002162: 338966
locus tag: PPRO_RS19025
old locus tag: Ppro_3828
so part of: sequence
location: complement(1405..4377)
location: region:1405-4377:-1
so has part: feature:1405-4377:-1:exon
subclass of: SO_0000010

position:1405:-1
position: 1405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4377:-1
position: 4377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1405-4377:-1:exon

PPRO_RS19025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338966
locus tag: PPRO_RS19025
old locus tag: Ppro_3828
inference: COORDINATES: similar to AA sequence:RefSeq:WP_021138877.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tn3 family transposase
translation: MPRRSILSATERESLLTLPDAKDELIRHYTFNETDLSVIRQRRGAANRLGFAVQLCYLRFPGIFLGVDDPPFPPLLRMVAAQLKVPVESWNHYGQREQTRREHLVELQTVFGFKPFTMSHYRQAVHTLTELALQTDKGIVLASTLVENLRRQSIILPAMNAIERASAEAITRANRSIHAALADSLIPVHRQRLDELLKRKDGSKMTWLAWLRQSPAKPNSRHMLEHIERLKAWQALDLPAGIERQVHQNRLLKIAREGGQMTPADLAKFESQRRYATLVALAIEGMATVTDEIIDLHDRIIGKLFNAAKNKHQQQFQASGKAINDKVRMYGRIGQALIEAKQSGGDPFAAIEAVMPWDTFAASVTEAQTLARPADFDFLHHIGESYATLRRYAPQFLDVLKLRAAPTAKGVLDAIDVLRGMNSDSARKVPADAPTAFIKPRWAKLVLTDEGIDRRYYELCALSELKNALRSGDVWVQGSRQFKDFDEYLVPIEKFATLKLASELPLAVATDCDQYLHDRLELLEAQLATVNRMAATNDLPDAIITTASGLKITPLDAAVPDAAQALIDQSAMLLPHLKITELLMEVDEWTGFTRHFTHLKTGDTAKDKTLLMTTILADGINLGLTKMAESCPGTTYAKLSWLQAWHVRDETYSTALAELVNAQFRQPFAGNWGDGTTSSSDGQNFRTGSKAESTGHINPKYGSSPGRTFYTHISDQYAPFSAKVVNVGLRDSTYVLDGLLYHESDLRIEEHYTDTAGFTDHVFGLMHFLGFRFAPRIRDLGDTKLFIPKGDTAYDALKPMISSDRLNIKAIRAHWDEILRLATSIKQGTVTASLMLRKLGSYPRQNGLAVALRELGRIERTLFILDWLQSVELRRRVHAGLNKGEARNALARAVFFYRLGEIRDRSFEQQRYRASGLNLVTAAIVLWNTVYLERATSALRAHGKALDDTLLQYLSPLGWEHINLTGDYLWRSSAKVGAGKFRPLRPLPPA
SIO_010081: PPRO_RS19025
subclass of: SO_0000673
so part of: PPRO_RS19025
location: complement(1405..4377)
location: region:1405-4377:-1
so has part: feature:1405-4377:-1:exon

WP_011733935.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1405-4377:-1:exon

PPRO_RS19030
type: Gene
subclass of: SO_0000704
RO_0002162: 338966
locus tag: PPRO_RS19030
old locus tag: Ppro_3829
so part of: sequence
location: complement(4380..4937)
location: region:4380-4937:-1
so has part: feature:4380-4937:-1:exon
subclass of: SO_0000010

position:4380:-1
position: 4380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4937:-1
position: 4937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4380-4937:-1:exon

PPRO_RS19030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338966
locus tag: PPRO_RS19030
old locus tag: Ppro_3829
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016236504.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MQGQRIGYVRVSSFDQNPDRQLEQIEVGKVFTDKASGKDTQRPELERLLAFVREGDTVVVHSMDRLARNLDDLRRIVQGLTQRGVRMEFVKEGLTFTGEDSPMANLMLSVMGAFAEFERALIRERQREGIVLAKQRGAYRGRKKSLNSEQIAELKRRVAAGDQKTLVARDFGISRETLYQYLRED
SIO_010081: PPRO_RS19030
subclass of: SO_0000673
so part of: PPRO_RS19030
location: complement(4380..4937)
location: region:4380-4937:-1
so has part: feature:4380-4937:-1:exon

WP_001162010.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4380-4937:-1:exon

PPRO_RS19035
type: Gene
subclass of: SO_0000704
RO_0002162: 338966
locus tag: PPRO_RS19035
old locus tag: Ppro_3830
so part of: sequence
location: complement(5068..6555)
location: region:5068-6555:-1
so has part: feature:5068-6555:-1:exon
subclass of: SO_0000010

position:5068:-1
position: 5068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6555:-1
position: 6555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5068-6555:-1:exon

PPRO_RS19035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338966
locus tag: PPRO_RS19035
old locus tag: Ppro_3830
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019677823.1
GO component: GO:0009279 - cell outer membrane [Evidence IEA]
GO function: GO:0015288 - porin activity [Evidence IEA]
GO process: GO:0006810 - transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: efflux transporter outer membrane subunit
translation: MEHAKTCQRPISLERRLAATYLVAGLVTAGLAGCAAGPDFQRPTAPDVARYTATPVADRTASAPTQFGETQRLVEGLPIETQWWQSLGSSALDGLINEAFHVSPTLASISANLRQAQELLAAQAGSTQYPQVDVALGSQRQQMSPSSQGLSGDARQFSLYNASVGVHYNLDLAGGNRRALEALAARADYRRFELNAARLALAGNMATAAITRARLAAQLEATTAILRVQDEQLRLAHERVRIGQASPDEALSLQAQAEQTRAELPALRKQLQQTEHLLAVLAGRAPGTGGIPAFTLADFTLPVEMPLVVPSELVRRRPDIQASEALLHAANADYGVAIAKLYPQINLSANLGSQALTTGALFGGGSAVWGLVAQLTQPLFNPGLPAEKRAALAAFDAAAANYQSVVLESLRNVADTLRAVESDAQTLTALAAADMAAQASLQSVERQYRLGAASYLQLLIAQQQAQSIRINMVAAQAQRLVDSVALYQALGGGVS
SIO_010081: PPRO_RS19035
subclass of: SO_0000673
so part of: PPRO_RS19035
location: complement(5068..6555)
location: region:5068-6555:-1
so has part: feature:5068-6555:-1:exon

WP_011733936.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5068-6555:-1:exon

PPRO_RS19040
type: Gene
subclass of: SO_0000704
RO_0002162: 338966
locus tag: PPRO_RS19040
old locus tag: Ppro_3831
so part of: sequence
location: complement(6542..7015)
location: region:6542-7015:-1
so has part: feature:6542-7015:-1:exon
subclass of: SO_0000010

position:6542:-1
position: 6542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7015:-1
position: 7015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6542-7015:-1:exon

PPRO_RS19040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338966
locus tag: PPRO_RS19040
old locus tag: Ppro_3831
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012204556.1
GO function: GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c
translation: MTHRKHSHAFGTITLTVTACLLLWGFQLPAWAGDATQIEPLALRKIMQELGRNMQAITGAISQEEWVQVVQLAPKVAAHPEPPLTEKMRILAYLGADATKFRNFDAQTHEAALAMKLAAASSDGKAVIQSFAHVQESCLGCHQAFRKPFVEHFYGAR
SIO_010081: PPRO_RS19040
subclass of: SO_0000673
so part of: PPRO_RS19040
location: complement(6542..7015)
location: region:6542-7015:-1
so has part: feature:6542-7015:-1:exon

WP_011733937.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6542-7015:-1:exon

PPRO_RS19045
type: Gene
subclass of: SO_0000704
RO_0002162: 338966
locus tag: PPRO_RS19045
old locus tag: Ppro_3832
so part of: sequence
location: complement(7044..7754)
location: region:7044-7754:-1
so has part: feature:7044-7754:-1:exon
subclass of: SO_0000010

position:7044:-1
position: 7044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7754:-1
position: 7754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7044-7754:-1:exon

PPRO_RS19045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338966
locus tag: PPRO_RS19045
old locus tag: Ppro_3832
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019677824.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MSGKGIRIEGLRKRYGEGDTAVDALKGVDMQVAPGEVVGLIGPSGSGKSTLLKCLGAVIDPTAGRMTLGDEVIYDDGWKVRDLRALRRDKIGFVFQAPYLIPFLDVTDNVALLPMLAGVANGESRAKALELLTALDVQHRARAMPSQLSGGEQQRVAIARGLVNRPPVILADEPTAPLDSERAMAVIRILNDMARKFETAIIVVTHDEKIIPTFKRIYHIRDGVTHEEAGEGREFE
SIO_010081: PPRO_RS19045
subclass of: SO_0000673
so part of: PPRO_RS19045
location: complement(7044..7754)
location: region:7044-7754:-1
so has part: feature:7044-7754:-1:exon

WP_011733938.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7044-7754:-1:exon

PPRO_RS19050
type: Gene
subclass of: SO_0000704
RO_0002162: 338966
locus tag: PPRO_RS19050
old locus tag: Ppro_3833
so part of: sequence
location: complement(7756..8961)
location: region:7756-8961:-1
so has part: feature:7756-8961:-1:exon
subclass of: SO_0000010

position:7756:-1
position: 7756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8961:-1
position: 8961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7756-8961:-1:exon

PPRO_RS19050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338966
locus tag: PPRO_RS19050
old locus tag: Ppro_3833
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011734096.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MISLAGRDILHAWGKFVFTGIGLGLLIGVTLVMAGVYRGMVDDGKALLDNSGADLWVVQKDTLGPYAESSSLNDDVYRAILAMPGVAQAANVTYLTMQVRKGESDVRTMVVGIAPGALGATPGWPPYLVAGRQITRGHYEAVADIATGFKLGDRLAIRRNHYTVVGLTRRMVSSSGDPMVFIPLKDAQEAQFLKDNDAIWQSRRRTEANPAFNRPGVPGLLDAVIASQSTNAFVNAVLVTLKPGHTPDEVAESIRRWKRLTVYTRAQMEDILVGKLIATSAKQIGMFLVILAIVSAAIVAFIIYSLTMDKIREIAVLKLIGTRNRTIAAMIMQQALALGVIGFVVGKITATFSAPLFPKYVLLMPFDSIAGFFAVLVICVLASIVAIRMALKVDPAEAIGG
SIO_010081: PPRO_RS19050
subclass of: SO_0000673
so part of: PPRO_RS19050
location: complement(7756..8961)
location: region:7756-8961:-1
so has part: feature:7756-8961:-1:exon

WP_011733939.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7756-8961:-1:exon

PPRO_RS19055
type: Gene
subclass of: SO_0000704
RO_0002162: 338966
locus tag: PPRO_RS19055
old locus tag: Ppro_3834
so part of: sequence
location: complement(8958..10109)
location: region:8958-10109:-1
so has part: feature:8958-10109:-1:exon
subclass of: SO_0000010

position:8958:-1
position: 8958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10109:-1
position: 10109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8958-10109:-1:exon

PPRO_RS19055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338966
locus tag: PPRO_RS19055
old locus tag: Ppro_3834
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003056109.1
GO function: GO:0005215 - transporter activity [Evidence IEA]
GO process: GO:0006810 - transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: efflux RND transporter periplasmic adaptor subunit
translation: MKKLPLQGRTLALLAVIIPLLVLFIYVGLRSGPLAPVAVTVASVESRAITPALFGIGTVEARYTYKIGPTFAGRVKRLEVHVGDQVKAGQVLGEMDPVDLDDRVRSQESAFKRAEAALREAEARQAYAQTQARRYEQLFAVRSTSEEIVTTKRQELQIADAALSAAREDIARARSDREGLVAQRSNLRLIAPVDGVVAVRDADPGTTIVAGQAVVEVIDPKSLWINVRFDQISASGLAGGLPARIVLRSRGGQTLNGRVLRVEPKADAVTEETLAKVTFDNKPEPLPPVGELGEVTVDLPALPAAPLIPNSAVQREGDKVGVWQIVDGDLRFSPVKLGTSDLNGYVQVREGLKNGDQVVTYSEKALTARSRIHVVDHIPGVSR
SIO_010081: PPRO_RS19055
subclass of: SO_0000673
so part of: PPRO_RS19055
location: complement(8958..10109)
location: region:8958-10109:-1
so has part: feature:8958-10109:-1:exon

WP_011733940.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8958-10109:-1:exon

PPRO_RS19060
type: Gene
subclass of: SO_0000704
RO_0002162: 338966
locus tag: PPRO_RS19060
old locus tag: Ppro_3835
so part of: sequence
location: complement(10106..10714)
location: region:10106-10714:-1
so has part: feature:10106-10714:-1:exon
subclass of: SO_0000010

position:10106:-1
position: 10106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10714:-1
position: 10714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10106-10714:-1:exon

PPRO_RS19060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338966
locus tag: PPRO_RS19060
old locus tag: Ppro_3835
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012204557.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TetR/AcrR family transcriptional regulator
translation: MDTHPKHLPADERRAVTVESVVALAGSQNPSEITTAAIAKHMNLTQGALFRHFPNKEAIWQAVMEWVAERLLARIDRSAQGIDSPLAAMEAMFMSHIEFVAEHPGVPRMMFGELQRAESTPAKRMVQTLIQRYGERLHRLIEKGKASGELSPSLDNEAAATLFIGTIQGLVMQSLLAGDVGRMHRDAPRVFAIYRRGIRSAQ
SIO_010081: PPRO_RS19060
subclass of: SO_0000673
so part of: PPRO_RS19060
location: complement(10106..10714)
location: region:10106-10714:-1
so has part: feature:10106-10714:-1:exon

WP_011733941.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10106-10714:-1:exon

PPRO_RS19065
type: Gene
subclass of: SO_0000704
RO_0002162: 338966
locus tag: PPRO_RS19065
old locus tag: Ppro_3836
so part of: sequence
location: complement(10973..11263)
location: region:10973-11263:-1
so has part: feature:10973-11263:-1:exon
subclass of: SO_0000010

position:10973:-1
position: 10973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11263:-1
position: 11263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10973-11263:-1:exon

PPRO_RS19065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338966
locus tag: PPRO_RS19065
old locus tag: Ppro_3836
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018953217.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HigA family addiction module antitoxin
translation: MATMFNPPHPGEIIRELCLEPLGVTVTEAAKALGVSRKALSELLNGHSRVSPEMAVRLSIALETTADSWLIQQAQYDLWLAEQKRDTLQVRILKAA
SIO_010081: PPRO_RS19065
subclass of: SO_0000673
so part of: PPRO_RS19065
location: complement(10973..11263)
location: region:10973-11263:-1
so has part: feature:10973-11263:-1:exon

WP_011733942.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10973-11263:-1:exon

PPRO_RS20540
type: Gene
subclass of: SO_0000704
RO_0002162: 338966
locus tag: PPRO_RS20540
old locus tag: Ppro_3837
so part of: sequence
location: complement(11277..11555)
location: region:11277-11555:-1
so has part: feature:11277-11555:-1:exon
subclass of: SO_0000010

position:11277:-1
position: 11277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11555:-1
position: 11555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11277-11555:-1:exon

PPRO_RS20540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338966
locus tag: PPRO_RS20540
old locus tag: Ppro_3837
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002791849.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MIKSFNHKGLERYYESGNKAGIQAQYEKRIRLILGRLNASCEPKDMNLPGLRLHALQGALSDFWAVDVSGNWRIIFRFEGPNVFDVNLVDYH
SIO_010081: PPRO_RS20540
subclass of: SO_0000673
so part of: PPRO_RS20540
location: complement(11277..11555)
location: region:11277-11555:-1
so has part: feature:11277-11555:-1:exon

WP_011733943.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11277-11555:-1:exon

PPRO_RS20545
type: Gene
subclass of: SO_0000704
RO_0002162: 338966
locus tag: PPRO_RS20545
old locus tag: Ppro_3838
so part of: sequence
location: complement(11895..12422)
location: region:11895-12422:-1
so has part: feature:11895-12422:-1:exon
subclass of: SO_0000010

position:11895:-1
position: 11895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12422:-1
position: 12422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11895-12422:-1:exon

PPRO_RS20545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338966
locus tag: PPRO_RS20545
old locus tag: Ppro_3838
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004247966.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MTISPWHEEPISKQHNREAFDCGNAALNDFLRRHARQTHEHGGAKTFVAVSDDNPSLVFGFYSLSPASVEFSRTPSIITRGLARHDVPVFRLCRLAVDRTMQSKGLGGQLLLSAGRRCLRASQEVGGVALLIDAKNESVAHWYTNYGALPLLDIPLSLLLPLSTIQAALNAAGKL
SIO_010081: PPRO_RS20545
subclass of: SO_0000673
so part of: PPRO_RS20545
location: complement(11895..12422)
location: region:11895-12422:-1
so has part: feature:11895-12422:-1:exon

WP_011733944.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11895-12422:-1:exon

PPRO_RS19075
type: Gene
subclass of: SO_0000704
RO_0002162: 338966
locus tag: PPRO_RS19075
old locus tag: Ppro_3839
so part of: sequence
location: complement(12419..12697)
location: region:12419-12697:-1
so has part: feature:12419-12697:-1:exon
subclass of: SO_0000010

position:12419:-1
position: 12419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12697:-1
position: 12697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12419-12697:-1:exon

PPRO_RS19075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338966
locus tag: PPRO_RS19075
old locus tag: Ppro_3839
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014261383.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1778 domain-containing protein
translation: MPRVAVKENNRMSLRIRPNDKALLMRAVSYTHTDLTDFVLKNALQAAKDVIAQAEQVSLSERDSLRVLDALENPPSPNSKLLAAAHALPVQP
SIO_010081: PPRO_RS19075
subclass of: SO_0000673
so part of: PPRO_RS19075
location: complement(12419..12697)
location: region:12419-12697:-1
so has part: feature:12419-12697:-1:exon

WP_011733945.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12419-12697:-1:exon

PPRO_RS19085
type: Gene
subclass of: SO_0000704
RO_0002162: 338966
locus tag: PPRO_RS19085
old locus tag: Ppro_3841
so part of: sequence
location: 13629..14495
location: region:13629-14495:1
so has part: feature:13629-14495:1:exon
subclass of: SO_0000010

position:13629:1
position: 13629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14495:1
position: 14495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13629-14495:1:exon

PPRO_RS19085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338966
locus tag: PPRO_RS19085
old locus tag: Ppro_3841
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018704829.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication protein RepA
translation: MLSRATEQFLAQVLAIEADSVTPADLGFMARSLTLCTMPHSKPSDNEFTRRNGSYTLTMQAPKAIGLPYGSLPRLLLAWIVTEAVQTKSRTLTLGHSLSDFLKELGLSRQGGERGDITRLRQQMRRLFSCSIRCEYQDGKHDAGIGFMVADSYSLWWHPQEEKQAGLWESTLTLSEKFYQEITAAPIPLDMRALKALKRSPMSLDLYMWLTFRNSYLKTPTVISWQQLQQQFGAEYNRTRAFREAFRDAMRKVLVVYPTAQVTDVDNGLMLNPSPTHVPRKVKTLLTE
SIO_010081: PPRO_RS19085
subclass of: SO_0000673
so part of: PPRO_RS19085
location: 13629..14495
location: region:13629-14495:1
so has part: feature:13629-14495:1:exon

WP_011733947.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13629-14495:1:exon

PPRO_RS19090
type: Gene
subclass of: SO_0000704
RO_0002162: 338966
locus tag: PPRO_RS19090
old locus tag: Ppro_3842
so part of: sequence
location: 14980..15234
location: region:14980-15234:1
so has part: feature:14980-15234:1:exon
subclass of: SO_0000010

position:14980:1
position: 14980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15234:1
position: 15234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14980-15234:1:exon

PPRO_RS19090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338966
locus tag: PPRO_RS19090
old locus tag: Ppro_3842
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012646532.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribbon-helix-helix domain-containing protein
translation: MRKAAAISLRIEPEIKTRLESLARVTRRSKSFLVEDALEAYLGVNEWQIRGIMEAVQEADSLGAEWTSHEDLKAAWEARRDQMA
SIO_010081: PPRO_RS19090
subclass of: SO_0000673
so part of: PPRO_RS19090
location: 14980..15234
location: region:14980-15234:1
so has part: feature:14980-15234:1:exon

WP_011733948.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14980-15234:1:exon

PPRO_RS19095
type: Gene
subclass of: SO_0000704
RO_0002162: 338966
locus tag: PPRO_RS19095
old locus tag: Ppro_3843
so part of: sequence
location: 15218..15499
location: region:15218-15499:1
so has part: feature:15218-15499:1:exon
subclass of: SO_0000010

position:15218:1
position: 15218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15499:1
position: 15499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15218-15499:1:exon

PPRO_RS19095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338966
locus tag: PPRO_RS19095
old locus tag: Ppro_3843
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013031410.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MIRWLRRAERDLVHVEAYIAQDNPRAAVAMVLTIIEAVEQLDAHPGMGRAGRVEGTRELVVAGTPYVVPYRQKGKWIEILRVYHAARLWPEAF
SIO_010081: PPRO_RS19095
subclass of: SO_0000673
so part of: PPRO_RS19095
location: 15218..15499
location: region:15218-15499:1
so has part: feature:15218-15499:1:exon

WP_011733949.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15218-15499:1:exon

PPRO_RS19100
type: Gene
subclass of: SO_0000704
RO_0002162: 338966
locus tag: PPRO_RS19100
old locus tag: Ppro_3844
so part of: sequence
location: complement(15731..16123)
location: region:15731-16123:-1
so has part: feature:15731-16123:-1:exon
subclass of: SO_0000010

position:15731:-1
position: 15731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16123:-1
position: 16123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15731-16123:-1:exon

PPRO_RS19100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338966
locus tag: PPRO_RS19100
old locus tag: Ppro_3844
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHAEKLKIFRGWLGEPQTDGDKAYTKEELDYLSLVGAIANVKRSIDEPKKEKDFERRVKQLISQRRHTSAPVTSRIEKEFLTLIHQLRSTKPKPMSWRKVQEYIKKRHYKTFGVSTMIKAYKAEYGEDAG
SIO_010081: PPRO_RS19100
subclass of: SO_0000673
so part of: PPRO_RS19100
location: complement(15731..16123)
location: region:15731-16123:-1
so has part: feature:15731-16123:-1:exon

WP_157040165.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15731-16123:-1:exon

PPRO_RS19105
type: Gene
subclass of: SO_0000704
RO_0002162: 338966
locus tag: PPRO_RS19105
old locus tag: Ppro_3845
so part of: sequence
location: complement(16170..19142)
location: region:16170-19142:-1
so has part: feature:16170-19142:-1:exon
subclass of: SO_0000010

position:16170:-1
position: 16170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19142:-1
position: 19142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16170-19142:-1:exon

PPRO_RS19105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338966
locus tag: PPRO_RS19105
old locus tag: Ppro_3845
inference: COORDINATES: similar to AA sequence:RefSeq:WP_021138877.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tn3 family transposase
translation: MPRRSILSATERESLLTLPDAKDELIRHYTFNETDLSVIRQRRGAANRLGFAVQLCYLRFPGIFLGVDDPPFPPLLRMVAAQLKVPVESWNHYGQREQTRREHLVELQTVFGFKPFTMSHYRQAVHTLTELALQTDKGIVLASTLVENLRRQSIILPAMNAIERASAEAITRANRSIHAALADSLIPVHRQRLDELLKRKDGSKMTWLAWLRQSPAKPNSRHMLEHIERLKAWQALDLPAGIERQVHQNRLLKIAREGGQMTPADLAKFESQRRYATLVALAIEGMATVTDEIIDLHDRIIGKLFNAAKNKHQQQFQASGKAINDKVRMYGRIGQALIEAKQSGGDPFAAIEAVMPWDTFAASVTEAQTLARPADFDFLHHIGESYATLRRYAPQFLDVLKLRAAPTAKGVLDAIDVLRGMNSDSARKVPADAPTAFIKPRWAKLVLTDEGIDRRYYELCALSELKNALRSGDVWVQGSRQFKDFDEYLVPIEKFATLKLASELPLAVATDCDQYLHDRLELLEAQLATVNRMAATNDLPDAIITTASGLKITPLDAAVPDAAQALIDQSAMLLPHLKITELLMEVDEWTGFTRHFTHLKTGDTAKDKTLLMTTILADGINLGLTKMAESCPGTTYAKLSWLQAWHVRDETYSTALAELVNAQFRQPFAGNWGDGTTSSSDGQNFRTGSKAESTGHINPKYGSSPGRTFYTHISDQYAPFSAKVVNVGLRDSTYVLDGLLYHESDLRIEEHYTDTAGFTDHVFGLMHFLGFRFAPRIRDLGDTKLFIPKGDTAYDALKPMISSDRLNIKAIRAHWDEILRLATSIKQGTVTASLMLRKLGSYPRQNGLAVALRELGRIERTLFILDWLQSVELRRRVHAGLNKGEARNALARAVFFYRLGEIRDRSFEQQRYRASGLNLVTAAIVLWNTVYLERATSALRAHGKALDDTLLQYLSPLGWEHINLTGDYLWRSSAKVGAGKFRPLRPLPPA
SIO_010081: PPRO_RS19105
subclass of: SO_0000673
so part of: PPRO_RS19105
location: complement(16170..19142)
location: region:16170-19142:-1
so has part: feature:16170-19142:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16170-19142:-1:exon

PPRO_RS19110
type: Gene
subclass of: SO_0000704
RO_0002162: 338966
locus tag: PPRO_RS19110
old locus tag: Ppro_3846
so part of: sequence
location: complement(19145..19702)
location: region:19145-19702:-1
so has part: feature:19145-19702:-1:exon
subclass of: SO_0000010

position:19145:-1
position: 19145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19702:-1
position: 19702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19145-19702:-1:exon

PPRO_RS19110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338966
locus tag: PPRO_RS19110
old locus tag: Ppro_3846
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016236504.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MQGQRIGYVRVSSFDQNPDRQLEQIEVGKVFTDKASGKDTQRPELERLLAFVREGDTVVVHSMDRLARNLDDLRRIVQGLTQRGVRMEFVKEGLTFTGEDSPMANLMLSVMGAFAEFERALIRERQREGIVLAKQRGAYRGRKKSLNSEQIAELKRRVAAGDQKTLVARDFGISRETLYQYLRED
SIO_010081: PPRO_RS19110
subclass of: SO_0000673
so part of: PPRO_RS19110
location: complement(19145..19702)
location: region:19145-19702:-1
so has part: feature:19145-19702:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19145-19702:-1:exon

PPRO_RS19115
type: Gene
subclass of: SO_0000704
RO_0002162: 338966
locus tag: PPRO_RS19115
old locus tag: Ppro_3847
so part of: sequence
location: complement(19833..21320)
location: region:19833-21320:-1
so has part: feature:19833-21320:-1:exon
subclass of: SO_0000010

position:19833:-1
position: 19833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21320:-1
position: 21320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19833-21320:-1:exon

PPRO_RS19115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338966
locus tag: PPRO_RS19115
old locus tag: Ppro_3847
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019677823.1
GO component: GO:0009279 - cell outer membrane [Evidence IEA]
GO function: GO:0015288 - porin activity [Evidence IEA]
GO process: GO:0006810 - transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: efflux transporter outer membrane subunit
translation: MEHAKTCQRPISLERRLAATYLVAGLVTAGLAGCAAGPDFQRPTAPDVARYTATPVADRTASAPTQFGETQRLVEGLPIETQWWQSLGSSALDGLINEAFHVSPTLASISANLRQAQELLAAQAGSTQYPQVDVALGSQRQQMSPSSQGLSGDARQFSLYNASVGVHYNLDLAGGNRRALEALAARADYRRFELNAARLALAGNMATAAITRARLAAQLEATTAILRVQDEQLRLAHERVRIGQASPDEALSLQAQAEQTRAELPALRKQLQQTEHLLAVLAGRAPGTGGIPAFTLADFTLPVEMPLVVPSELVRRRPDIQASEALLHAANADYGVAIAKLYPQINLSANLGSQALTTGALFGGGSAVWGLVAQLTQPLFNPGLPAEKRAALAAFDAAAANYQSVVLESLRNVADTLRAVESDAQTLTALAAADMAAQASLQSVERQYRLGAASYLQLLIAQQQAQSIRINMVAAQAQRLVDSVALYQALGGGVS
SIO_010081: PPRO_RS19115
subclass of: SO_0000673
so part of: PPRO_RS19115
location: complement(19833..21320)
location: region:19833-21320:-1
so has part: feature:19833-21320:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19833-21320:-1:exon

PPRO_RS19120
type: Gene
subclass of: SO_0000704
RO_0002162: 338966
locus tag: PPRO_RS19120
old locus tag: Ppro_3848
so part of: sequence
location: complement(21307..21780)
location: region:21307-21780:-1
so has part: feature:21307-21780:-1:exon
subclass of: SO_0000010

position:21307:-1
position: 21307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21780:-1
position: 21780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21307-21780:-1:exon

PPRO_RS19120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338966
locus tag: PPRO_RS19120
old locus tag: Ppro_3848
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012204556.1
GO function: GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c
translation: MTHRKHSHAFGTITLTVTACLLLWGFQLPAWAGDATQIEPLALRKIMQELGRNMQAITGAISQEEWVQVVQLAPKVAAHPEPPLTEKMRILAYLGADATKFRNFDAQTHEAALAMKLAAASSDGKAVIQSFAHVQESCLGCHQAFRKPFVEHFYGAR
SIO_010081: PPRO_RS19120
subclass of: SO_0000673
so part of: PPRO_RS19120
location: complement(21307..21780)
location: region:21307-21780:-1
so has part: feature:21307-21780:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21307-21780:-1:exon

PPRO_RS19125
type: Gene
subclass of: SO_0000704
RO_0002162: 338966
locus tag: PPRO_RS19125
old locus tag: Ppro_3849
so part of: sequence
location: complement(21809..22519)
location: region:21809-22519:-1
so has part: feature:21809-22519:-1:exon
subclass of: SO_0000010

position:21809:-1
position: 21809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22519:-1
position: 22519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21809-22519:-1:exon

PPRO_RS19125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338966
locus tag: PPRO_RS19125
old locus tag: Ppro_3849
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019677824.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MSGKGIRIEGLRKRYGEGDTAVDALKGVDMQVAPGEVVGLIGPSGSGKSTLLKCLGAVIDPTAGRMTLGDEVIYDDGWKVRDLRALRRDKIGFVFQAPYLIPFLDVTDNVALLPMLAGVANGESRAKALELLTALDVQHRARAMPSQLSGGEQQRVAIARGLVNRPPVILADEPTAPLDSERAMAVIRILNDMARKFETAIIVVTHDEKIIPTFKRIYHIRDGVTHEEAGEGREFE
SIO_010081: PPRO_RS19125
subclass of: SO_0000673
so part of: PPRO_RS19125
location: complement(21809..22519)
location: region:21809-22519:-1
so has part: feature:21809-22519:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21809-22519:-1:exon

PPRO_RS19130
type: Gene
subclass of: SO_0000704
RO_0002162: 338966
locus tag: PPRO_RS19130
old locus tag: Ppro_3850
so part of: sequence
location: complement(22521..23726)
location: region:22521-23726:-1
so has part: feature:22521-23726:-1:exon
subclass of: SO_0000010

position:22521:-1
position: 22521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23726:-1
position: 23726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22521-23726:-1:exon

PPRO_RS19130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338966
locus tag: PPRO_RS19130
old locus tag: Ppro_3850
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011734096.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MISLAGRDILHAWGKFVFTGIGLGLLIGVTLVMAGVYRGMVDDGKALLDNSGADLWVVQKDTLGPYAESSSLNDDVYRAILAMPGVAQAANVTYLTMQVRKGESDVRTMVVGIAPGALGATPGWPPYLVAGRQITRGHYEAVADIATGFKLGDRLAIRRNHYTVVGLTRRMVSSSGDPMVFIPLKDAQEAQFLKDNDAIWQSRRRTEANPAFNRPGVPGLLDAVIASQSTNAFVNAVLVTLKPGHTPDEVAESIRRWKRLTVYTRAQMEDILVGKLIATSAKQIGMFLVILAIVSAAIVAFIIYSLTMDKIREIAVLKLIGTRNRTIAAMIMQQALALGVIGFVVGKITATFSAPLFPKYVLLMPFDSIAGFFAVLVICVLASIVAIRMALKVDPAEAIGG
SIO_010081: PPRO_RS19130
subclass of: SO_0000673
so part of: PPRO_RS19130
location: complement(22521..23726)
location: region:22521-23726:-1
so has part: feature:22521-23726:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22521-23726:-1:exon

PPRO_RS19135
type: Gene
subclass of: SO_0000704
RO_0002162: 338966
locus tag: PPRO_RS19135
old locus tag: Ppro_3851
so part of: sequence
location: complement(23723..24874)
location: region:23723-24874:-1
so has part: feature:23723-24874:-1:exon
subclass of: SO_0000010

position:23723:-1
position: 23723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24874:-1
position: 24874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23723-24874:-1:exon

PPRO_RS19135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338966
locus tag: PPRO_RS19135
old locus tag: Ppro_3851
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003056109.1
GO function: GO:0005215 - transporter activity [Evidence IEA]
GO process: GO:0006810 - transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: efflux RND transporter periplasmic adaptor subunit
translation: MKKLPLQGRTLALLAVIIPLLVLFIYVGLRSGPLAPVAVTVASVESRAITPALFGIGTVEARYTYKIGPTFAGRVKRLEVHVGDQVKAGQVLGEMDPVDLDDRVRSQESAFKRAEAALREAEARQAYAQTQARRYEQLFAVRSTSEEIVTTKRQELQIADAALSAAREDIARARSDREGLVAQRSNLRLIAPVDGVVAVRDADPGTTIVAGQAVVEVIDPKSLWINVRFDQISASGLAGGLPARIVLRSRGGQTLNGRVLRVEPKADAVTEETLAKVTFDNKPEPLPPVGELGEVTVDLPALPAAPLIPNSAVQREGDKVGVWQIVDGDLRFSPVKLGTSDLNGYVQVREGLKNGDQVVTYSEKALTARSRIHVVDHIPGVSR
SIO_010081: PPRO_RS19135
subclass of: SO_0000673
so part of: PPRO_RS19135
location: complement(23723..24874)
location: region:23723-24874:-1
so has part: feature:23723-24874:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23723-24874:-1:exon

PPRO_RS19140
type: Gene
subclass of: SO_0000704
RO_0002162: 338966
locus tag: PPRO_RS19140
old locus tag: Ppro_3852
so part of: sequence
location: complement(24871..25479)
location: region:24871-25479:-1
so has part: feature:24871-25479:-1:exon
subclass of: SO_0000010

position:24871:-1
position: 24871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25479:-1
position: 25479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24871-25479:-1:exon

PPRO_RS19140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338966
locus tag: PPRO_RS19140
old locus tag: Ppro_3852
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012204557.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TetR/AcrR family transcriptional regulator
translation: MDTHPKHLPADERRAVTVESVVALAGSQNPSEITTAAIAKHMNLTQGALFRHFPNKEAIWQAVMEWVAERLLARIDRSAQGIDSPLAAMEAMFMSHIEFVAEHPGVPRMMFGELQRAESTPAKRMVQTLIQRYGERLHRLIEKGKASGELSPSLDNEAAATLFIGTIQGLVMQSLLAGDVGRMHRDAPRVFAIYRRGIRSAQ
SIO_010081: PPRO_RS19140
subclass of: SO_0000673
so part of: PPRO_RS19140
location: complement(24871..25479)
location: region:24871-25479:-1
so has part: feature:24871-25479:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24871-25479:-1:exon

PPRO_RS19145
type: Gene
subclass of: SO_0000704
RO_0002162: 338966
locus tag: PPRO_RS19145
old locus tag: Ppro_3853
so part of: sequence
location: 25640..26689
location: region:25640-26689:1
so has part: feature:25640-26689:1:exon
subclass of: SO_0000010

position:25640:1
position: 25640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26689:1
position: 26689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25640-26689:1:exon

PPRO_RS19145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338966
locus tag: PPRO_RS19145
old locus tag: Ppro_3853
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKLEEIKLEMAALSREIATQDIVVGEKPKKTRPAPTAKRKITKKQDISHTPEPTRSADPDGPGDLSRNTTSSEREKAKETARRDQVKPPPPKVQAITVKVGELLNEARNYRDRTHSLDRAKENKLNELKDSLIRPYYKEAVEQYVTQKYKSERDKLNETTKDYSERVTAYNETVEKAGWFTRNFKDFKTPALELENERQKIINRQTELEEKEASDKQKLLGSDHWYVPEKYEVDRLAEKLYQERDPQGYATKQAAIPIIEDRIKAERHASQPERDRVDKLCRNLGKLSNSDRNKYIELTFPVDQAGKRLTLEQAFSNPATREITGKAINSLNQSLELNHKEHDRGISR
SIO_010081: PPRO_RS19145
subclass of: SO_0000673
so part of: PPRO_RS19145
location: 25640..26689
location: region:25640-26689:1
so has part: feature:25640-26689:1:exon

WP_041533074.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25640-26689:1:exon

PPRO_RS19150
type: Gene
subclass of: SO_0000704
RO_0002162: 338966
locus tag: PPRO_RS19150
old locus tag: Ppro_3854
so part of: sequence
location: complement(26740..27744)
location: region:26740-27744:-1
so has part: feature:26740-27744:-1:exon
subclass of: SO_0000010

position:26740:-1
position: 26740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27744:-1
position: 27744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26740-27744:-1:exon

PPRO_RS19150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338966
locus tag: PPRO_RS19150
old locus tag: Ppro_3854
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000572864.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKQEEFEHVLDGVCVKLTDEANRTAFQSAGQFEHRVREVLQEAIQSDTSIIIDFTPHPQAFPDIAIGRFGVEVKFSLNDTWRSVANSVLETNRIESVEKVYLVFGKMGGVPEVRWGDYEQSVIHVRTSHVPRFEVELFTSRSLFELMGISYDEFRTLQMEDKMHHIRTYARSRLKNGERLWWLEDTPDAEHTLPIQARLYTSLTTTEKIKLRAEAALLCPSIVKSGRSKNKYDDVVLYLLTYHGVICHQARDLFSAGSVANPENDDNGGIYIERALKLVEPEMIEAALRMEDALFVEYWGESVQPEQRIRRWLEKADAIARDWTPSKSLFLSIQ
SIO_010081: PPRO_RS19150
subclass of: SO_0000673
so part of: PPRO_RS19150
location: complement(26740..27744)
location: region:26740-27744:-1
so has part: feature:26740-27744:-1:exon

WP_011733952.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26740-27744:-1:exon

PPRO_RS19155
type: Gene
subclass of: SO_0000704
RO_0002162: 338966
locus tag: PPRO_RS19155
old locus tag: Ppro_3855
so part of: sequence
location: complement(27741..28682)
location: region:27741-28682:-1
so has part: feature:27741-28682:-1:exon
subclass of: SO_0000010

position:27741:-1
position: 27741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28682:-1
position: 28682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27741-28682:-1:exon

PPRO_RS19155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338966
locus tag: PPRO_RS19155
old locus tag: Ppro_3855
EC number: 2.1.1.37
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009647144.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA cytosine methyltransferase
translation: MAATKHMITVVSLFSGCGGMDLGFSGGFDFLGEHYAKTQFKIIWANELNGAACRTYRKNIGHHIKEGDIWQTMPEMPQSADLVIGGFPCQDISVNGKGAGVNGKRSGLYRAMVEAVSRIRPKIFVAENVKGLLMRHNADSLQRVLSDFRALGYEVSYHLYHAADYGVPQTRERVFIVGTRPDVQKFIPPKPVCSKHITAKEAIGDLETLAEDVEFNHIWSLANKSAEQGNRSLKAERPGYTIRAECHGNIQFHYALPRRISMREAARFQSFPDNFRFEAKLRETERQVGNAVPPVLAWHIAKATQAVLTGCAA
SIO_010081: PPRO_RS19155
subclass of: SO_0000673
so part of: PPRO_RS19155
location: complement(27741..28682)
location: region:27741-28682:-1
so has part: feature:27741-28682:-1:exon

WP_011733953.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27741-28682:-1:exon

PPRO_RS19160
type: Gene
subclass of: SO_0000704
RO_0002162: 338966
locus tag: PPRO_RS19160
old locus tag: Ppro_3856
so part of: sequence
location: 28874..29296
location: region:28874-29296:1
so has part: feature:28874-29296:1:exon
subclass of: SO_0000010

position:28874:1
position: 28874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29296:1
position: 29296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28874-29296:1:exon

PPRO_RS19160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338966
locus tag: PPRO_RS19160
old locus tag: Ppro_3856
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPKHSVSEAAKLAGVSRSHFYKKYIRPGLISIEKDKDNNPIIDTSEIMRVFGGIHCNTDNNVSKIQKDTLGNDNKNTILQTEVELLREQLAAAQERERLTADREKWMQKQIDQLTGQLADTTRLLEHKTLKPPKKRWWPF
SIO_010081: PPRO_RS19160
subclass of: SO_0000673
so part of: PPRO_RS19160
location: 28874..29296
location: region:28874-29296:1
so has part: feature:28874-29296:1:exon

WP_011733954.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28874-29296:1:exon

PPRO_RS19165
type: Gene
subclass of: SO_0000704
RO_0002162: 338966
locus tag: PPRO_RS19165
old locus tag: Ppro_3857
so part of: sequence
location: complement(29297..30007)
location: region:29297-30007:-1
so has part: feature:29297-30007:-1:exon
subclass of: SO_0000010

position:29297:-1
position: 29297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30007:-1
position: 30007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29297-30007:-1:exon

PPRO_RS19165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 338966
locus tag: PPRO_RS19165
old locus tag: Ppro_3857
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000676688.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MGRKPSITRGLQSKNVVVANTLVRSAQSLSLAEKRIVFAAAAKMGNNFGEVILHASEYAETFDMPVKQAYEQLKNAVEGMRTRYFTLAVPDREGVMIWKINWLQKIGYDDGKARVGLRFCEDVLPYLCDLTKEFTKYKLKQACALRSVHSWRLLELFEQQSSGWLAIKIEDFHHAMESNDSCRNNFAQLKRKIIEPAIKELREKDNWLIDFSFTKAGRKVDLLKFTFKKNPQGKLF
SIO_010081: PPRO_RS19165
subclass of: SO_0000673
so part of: PPRO_RS19165
location: complement(29297..30007)
location: region:29297-30007:-1
so has part: feature:29297-30007:-1:exon

WP_157040167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29297-30007:-1:exon