Halorubrum ezzemoulense strain Fb21 plasmid megaplasmid, complete sequence.
Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.
Complete Genome Sequence of Halorubrum ezzemoulense Strain Fb21
Microbiol Resour Announc 8 (12), e00096-19 (2019)
Submitted (07-JAN-2019) Molecular and Cell Biology, University of Connecticut, 91 N Eagleville Rd, Storrs, CT 06269, USA
REFSEQ INFORMATION: The reference sequence is identical to\nCP034941.1.\nBacteria and source DNA available from Thane Papke.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: SPAdes v. 3.12; MiniASM v. 12/20/2018\nAssembly Name :: Halorubrum ezzemoulense Fb21\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 100.0x\nSequencing Technology :: Illumina MiSeq; PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 07/30/2023 11:04:26\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,749\nCDSs (total) :: 3,667\nGenes (coding) :: 3,547\nCDSs (with protein) :: 3,547\nGenes (RNA) :: 82\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 74\nncRNAs :: 2\nPseudo Genes (total) :: 120\nCDSs (without protein) :: 120\nPseudo Genes (ambiguous residues) :: 0 of 120\nPseudo Genes (frameshifted) :: 33 of 120\nPseudo Genes (incomplete) :: 88 of 120\nPseudo Genes (internal stop) :: 30 of 120\nPseudo Genes (multiple problems) :: 26 of 120\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_008322119.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
orc1/cdc6 family replication initiation protein
COORDINATES: similar to AA sequence:RefSeq:WP_008446344.1
COORDINATES: similar to AA sequence:RefSeq:WP_013035018.1
GO:0004803 - transposase activity [Evidence IEA]
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008847077.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_007997459.1
COORDINATES: similar to AA sequence:RefSeq:WP_008444884.1
COORDINATES: similar to AA sequence:RefSeq:WP_004596127.1
GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010890471.1
COORDINATES: similar to AA sequence:RefSeq:WP_006114783.1
COORDINATES: similar to AA sequence:RefSeq:WP_006630749.1
COORDINATES: similar to AA sequence:RefSeq:WP_007190702.1
COORDINATES: similar to AA sequence:RefSeq:WP_004048622.1
COORDINATES: similar to AA sequence:RefSeq:WP_010890501.1
phage integrase SAM-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010890500.1
COORDINATES: similar to AA sequence:RefSeq:WP_009762297.1
COORDINATES: similar to AA sequence:RefSeq:WP_011324459.1
COORDINATES: similar to AA sequence:RefSeq:WP_015298960.1
GO:0006817 - phosphate ion transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012798.2
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012945067.1
COORDINATES: similar to AA sequence:RefSeq:WP_004959504.1
nuclear transport factor 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008445046.1
COORDINATES: similar to AA sequence:RefSeq:WP_020935938.1
COORDINATES: similar to AA sequence:RefSeq:WP_013875829.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008847155.1
COORDINATES: similar to AA sequence:RefSeq:WP_011222723.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_017342066.1
COORDINATES: similar to AA sequence:RefSeq:WP_008443300.1
COORDINATES: similar to AA sequence:RefSeq:WP_008444058.1
COORDINATES: similar to AA sequence:RefSeq:WP_012289545.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_076611141.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_076611118.1
COORDINATES: similar to AA sequence:RefSeq:WP_004965219.1
COORDINATES: similar to AA sequence:RefSeq:WP_005555038.1
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006056078.1
COORDINATES: similar to AA sequence:RefSeq:WP_008440005.1
COORDINATES: similar to AA sequence:RefSeq:WP_011322056.1
COORDINATES: protein motif:HMM:NF015581.2
COORDINATES: similar to AA sequence:RefSeq:WP_004596084.1
COORDINATES: similar to AA sequence:RefSeq:WP_005581008.1
COORDINATES: protein motif:HMM:NF019604.2
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006114822.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
FaeA/PapI family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_008008855.1
metal-dependent transcriptional regulator
COORDINATES: protein motif:HMM:NF013223.2
GO:0006811 - monoatomic ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF015956.2
GO:0046914 - transition metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014474.2
FeoB small GTPase domain-containing protein
COORDINATES: protein motif:HMM:NF019292.2
nucleoside recognition domain-containing protein
COORDINATES: protein motif:HMM:NF020581.2
COORDINATES: similar to AA sequence:RefSeq:WP_004043410.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008423395.1
GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO
COORDINATES: similar to AA sequence:RefSeq:WP_007344156.1
type II toxin-antitoxin system HicB family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_004599423.1
GO:0003729 - mRNA binding [Evidence IEA]
type II toxin-antitoxin system HicA family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_008444164.1
COORDINATES: similar to AA sequence:RefSeq:WP_004595450.1
COORDINATES: similar to AA sequence:RefSeq:WP_004599420.1
COORDINATES: similar to AA sequence:RefSeq:WP_007344160.1
COORDINATES: similar to AA sequence:RefSeq:WP_004595453.1
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007996596.1
COORDINATES: similar to AA sequence:RefSeq:WP_004595455.1
COORDINATES: similar to AA sequence:RefSeq:WP_007344164.1
COORDINATES: similar to AA sequence:RefSeq:WP_011571359.1
COORDINATES: similar to AA sequence:RefSeq:WP_015911438.1
COORDINATES: similar to AA sequence:RefSeq:WP_004595517.1
COORDINATES: similar to AA sequence:RefSeq:WP_007343992.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014555220.1
ISH3-like element ISH3B family transposase
COORDINATES: similar to AA sequence:RefSeq:WP_004599504.1
winged helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008365328.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004599505.1
COORDINATES: similar to AA sequence:RefSeq:WP_004595511.1
COORDINATES: similar to AA sequence:RefSeq:WP_017342158.1
COORDINATES: similar to AA sequence:RefSeq:WP_014556613.1
COORDINATES: similar to AA sequence:RefSeq:WP_004595508.1
COORDINATES: similar to AA sequence:RefSeq:WP_006627991.1
COORDINATES: similar to AA sequence:RefSeq:WP_004595506.1
histidine kinase N-terminal 7TM domain-containing protein
COORDINATES: protein motif:HMM:NF013226.2
GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004967255.1
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011572751.1
RNA-guided endonuclease TnpB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004595504.1
COORDINATES: similar to AA sequence:RefSeq:WP_004599511.1
COORDINATES: similar to AA sequence:RefSeq:WP_004594272.1
COORDINATES: similar to AA sequence:RefSeq:WP_012807608.1
COORDINATES: similar to AA sequence:RefSeq:WP_004517465.1
COORDINATES: similar to AA sequence:RefSeq:WP_014030903.1
GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014030902.1
COORDINATES: similar to AA sequence:RefSeq:WP_005538763.1
GO:0010124 - phenylacetate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004517461.1
COORDINATES: similar to AA sequence:RefSeq:WP_006077190.1
1,2-phenylacetyl-CoA epoxidase subunit PaaC
COORDINATES: similar to AA sequence:RefSeq:WP_005538757.1
1,2-phenylacetyl-CoA epoxidase subunit PaaD
COORDINATES: similar to AA sequence:RefSeq:WP_004966833.1
GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004517446.1
COORDINATES: similar to AA sequence:RefSeq:WP_006651288.1
COORDINATES: similar to AA sequence:RefSeq:WP_012944034.1
MaoC/PaaZ C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004055243.1
hydroxyphenylacetyl-CoA thioesterase PaaI
COORDINATES: similar to AA sequence:RefSeq:WP_008011730.1
GO:0047475 - phenylacetate-CoA ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004517453.1
COORDINATES: similar to AA sequence:RefSeq:WP_014030893.1
COORDINATES: similar to AA sequence:RefSeq:WP_004517451.1
GO:0016746 - acyltransferase activity [Evidence IEA]
GO:0006635 - fatty acid beta-oxidation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007188576.1
3-hydroxyacyl-CoA dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008011714.1
COORDINATES: similar to AA sequence:RefSeq:WP_010903158.1
COORDINATES: similar to AA sequence:RefSeq:WP_008011712.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007188574.1
COORDINATES: similar to AA sequence:RefSeq:WP_007188559.1
COORDINATES: similar to AA sequence:RefSeq:WP_008308429.1
COORDINATES: similar to AA sequence:RefSeq:WP_006666253.1
COORDINATES: similar to AA sequence:RefSeq:WP_012945940.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016614 - oxidoreductase activity, acting on CH-OH group of donors [Evidence IEA]
GMC family oxidoreductase N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF013584.2
COORDINATES: similar to AA sequence:RefSeq:WP_004594319.1
COORDINATES: similar to AA sequence:RefSeq:WP_004040864.1
GO:0047617 - acyl-CoA hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007188572.1
GO:0016811 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006090341.1
COORDINATES: similar to AA sequence:RefSeq:WP_008011693.1
COORDINATES: similar to AA sequence:RefSeq:WP_006165723.1
COORDINATES: similar to AA sequence:RefSeq:WP_005044584.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_008011686.1
COORDINATES: similar to AA sequence:RefSeq:WP_008308393.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005538723.1
COORDINATES: similar to AA sequence:RefSeq:WP_014039383.1
GO:0032559 - adenyl ribonucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008011678.1
COORDINATES: similar to AA sequence:RefSeq:WP_007344276.1
COORDINATES: similar to AA sequence:RefSeq:WP_014040852.1
COORDINATES: similar to AA sequence:RefSeq:WP_008605512.1
COORDINATES: similar to AA sequence:RefSeq:WP_004595499.1
COORDINATES: similar to AA sequence:RefSeq:WP_004971416.1
COORDINATES: similar to AA sequence:RefSeq:WP_049955228.1
COORDINATES: similar to AA sequence:RefSeq:WP_008007529.1
3-isopropylmalate dehydratase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_008007528.1
3-isopropylmalate dehydratase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_015909843.1
COORDINATES: similar to AA sequence:RefSeq:WP_015909842.1
GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008572255.1
COORDINATES: similar to AA sequence:RefSeq:WP_008847848.1
COORDINATES: similar to AA sequence:RefSeq:WP_015909839.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
LLM class flavin-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_015909838.1
COORDINATES: similar to AA sequence:RefSeq:WP_008847851.1
COORDINATES: similar to AA sequence:RefSeq:WP_008847852.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_008847853.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015909834.1
COORDINATES: similar to AA sequence:RefSeq:WP_008847855.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO:0015803 - branched-chain amino acid transport [Evidence IEA]
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_015909832.1
COORDINATES: similar to AA sequence:RefSeq:WP_008847857.1
GO:0016829 - lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004978175.1
COORDINATES: similar to AA sequence:RefSeq:WP_008847859.1
COORDINATES: similar to AA sequence:RefSeq:WP_015910933.1
COORDINATES: similar to AA sequence:RefSeq:WP_008847668.1
COORDINATES: similar to AA sequence:RefSeq:WP_007344124.1
COORDINATES: protein motif:HMM:NF021897.2
TraM recognition domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005577201.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013998.2
COORDINATES: protein motif:HMM:NF023418.2
transglutaminaseTgpA domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015298696.1
COORDINATES: similar to AA sequence:RefSeq:WP_010890532.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - DNA transposition [Evidence IEA]
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_020220586.1
COORDINATES: similar to AA sequence:RefSeq:WP_007344147.1
COORDINATES: similar to AA sequence:RefSeq:WP_007992646.1
COORDINATES: similar to AA sequence:RefSeq:WP_004595470.1
COORDINATES: similar to AA sequence:RefSeq:WP_006183397.1
COORDINATES: similar to AA sequence:RefSeq:WP_006183398.1
COORDINATES: similar to AA sequence:RefSeq:WP_006183399.1
COORDINATES: similar to AA sequence:RefSeq:WP_008846999.1
GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008846998.1
COORDINATES: similar to AA sequence:RefSeq:WP_008846997.1
COORDINATES: similar to AA sequence:RefSeq:WP_008443411.1
COORDINATES: similar to AA sequence:RefSeq:WP_006183401.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041626.1
COORDINATES: similar to AA sequence:RefSeq:WP_008313895.1
COORDINATES: similar to AA sequence:RefSeq:WP_004967099.1
COORDINATES: similar to AA sequence:RefSeq:WP_044951347.1
COORDINATES: similar to AA sequence:RefSeq:WP_009488238.1
COORDINATES: similar to AA sequence:RefSeq:WP_008446151.1
COORDINATES: similar to AA sequence:RefSeq:WP_006114833.1
COORDINATES: similar to AA sequence:RefSeq:WP_011571845.1
COORDINATES: similar to AA sequence:RefSeq:WP_004965093.1
COORDINATES: similar to AA sequence:RefSeq:WP_006087988.1
2-oxoacid:ferredoxin oxidoreductase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_008443203.1
COORDINATES: similar to AA sequence:RefSeq:WP_004963273.1
COORDINATES: similar to AA sequence:RefSeq:WP_004044077.1
GO:0005198 - structural molecule activity [Evidence IEA]
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017342465.1
COORDINATES: similar to AA sequence:RefSeq:WP_006115008.1
COORDINATES: similar to AA sequence:RefSeq:WP_008584262.1
COORDINATES: similar to AA sequence:RefSeq:WP_007979043.1
sugar phosphate isomerase/epimerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005575620.1
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004594268.1
COORDINATES: similar to AA sequence:RefSeq:WP_008325735.1
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004056427.1
COORDINATES: similar to AA sequence:RefSeq:WP_004968365.1
COORDINATES: similar to AA sequence:RefSeq:WP_006882682.1
COORDINATES: protein motif:HMM:NF028237.2
COORDINATES: similar to AA sequence:RefSeq:WP_011323479.1
COORDINATES: similar to AA sequence:RefSeq:WP_007983119.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007992857.1
COORDINATES: similar to AA sequence:RefSeq:WP_007344315.1
COORDINATES: similar to AA sequence:RefSeq:WP_014555959.1
COORDINATES: similar to AA sequence:RefSeq:WP_004216283.1
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008440062.1
COORDINATES: similar to AA sequence:RefSeq:WP_007142512.1
COORDINATES: similar to AA sequence:RefSeq:WP_059058773.1
COORDINATES: protein motif:HMM:NF023580.2
COORDINATES: protein motif:HMM:NF024743.2
DUF4097 family beta strand repeat-containing protein
COORDINATES: protein motif:HMM:NF040120.1
COORDINATES: similar to AA sequence:RefSeq:WP_008451789.1
COORDINATES: similar to AA sequence:RefSeq:WP_006885277.1
COORDINATES: similar to AA sequence:RefSeq:WP_011570370.1
COORDINATES: similar to AA sequence:RefSeq:WP_011571232.1
COORDINATES: similar to AA sequence:RefSeq:WP_008162844.1
GO:0004096 - catalase activity [Evidence IEA]; GO:0004601 - peroxidase activity [Evidence IEA]
GO:0006979 - response to oxidative stress [Evidence IEA]
COORDINATES: protein motif:HMM:NF013228.2
COORDINATES: similar to AA sequence:RefSeq:WP_006114805.1
2Fe-2S iron-sulfur cluster binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008453139.1
GO:0008199 - ferric iron binding [Evidence IEA]; GO:0004322 - ferroxidase activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
GO:0006880 - intracellular sequestering of iron ion [Evidence IEA]
DNA protection during starvation protein
COORDINATES: similar to AA sequence:RefSeq:WP_004595483.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611210.1
programmed frameshift; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011223896.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008365980.1
COORDINATES: similar to AA sequence:RefSeq:WP_004216157.1
COORDINATES: similar to AA sequence:RefSeq:WP_007976168.1
COORDINATES: similar to AA sequence:RefSeq:WP_007976166.1
COORDINATES: similar to AA sequence:RefSeq:WP_008005562.1
COORDINATES: similar to AA sequence:RefSeq:WP_007740208.1
COORDINATES: similar to AA sequence:RefSeq:WP_014050683.1
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012706.2
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
COORDINATES: protein motif:HMM:NF039614.1
COORDINATES: similar to AA sequence:RefSeq:WP_007997639.1
COORDINATES: similar to AA sequence:RefSeq:WP_006114098.1
COORDINATES: similar to AA sequence:RefSeq:WP_006651371.1
COORDINATES: similar to AA sequence:RefSeq:WP_004595756.1
COORDINATES: similar to AA sequence:RefSeq:WP_006114837.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_006114838.1
GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007993265.1
COORDINATES: similar to AA sequence:RefSeq:WP_007344098.1
COORDINATES: similar to AA sequence:RefSeq:WP_004595750.1
arsenite efflux transporter metallochaperone ArsD
COORDINATES: similar to AA sequence:RefSeq:WP_008583585.1
COORDINATES: similar to AA sequence:RefSeq:WP_006114843.1
COORDINATES: similar to AA sequence:RefSeq:WP_008007322.1
COORDINATES: similar to AA sequence:RefSeq:WP_004595746.1
low molecular weight phosphatase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006114846.1
COORDINATES: similar to AA sequence:RefSeq:WP_012289070.1
COORDINATES: similar to AA sequence:RefSeq:WP_005538589.1
COORDINATES: similar to AA sequence:RefSeq:WP_020221577.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008443197.1
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006054540.1
COORDINATES: protein motif:HMM:NF024753.2
PQQ-binding-like beta-propeller repeat protein
COORDINATES: similar to AA sequence:RefSeq:WP_017343634.1
GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
ribonucleoside-diphosphate reductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_006114018.1
GO:0005971 - ribonucleoside-diphosphate reductase complex [Evidence IEA]
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
GO:0009263 - deoxyribonucleotide biosynthetic process [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
ribonucleotide-diphosphate reductase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_008580558.1
GO:0140110 - transcription regulator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008443198.1
COORDINATES: similar to AA sequence:RefSeq:WP_006111946.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003952 - NAD+ synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015043.2
COORDINATES: similar to AA sequence:RefSeq:WP_006114156.1
hydantoinase/oxoprolinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006114155.1
hydantoinase B/oxoprolinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004048554.1
COORDINATES: similar to AA sequence:RefSeq:WP_013035031.1
COORDINATES: similar to AA sequence:RefSeq:WP_007344133.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
PAS domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_004596834.1
COORDINATES: similar to AA sequence:RefSeq:WP_015301645.1
COORDINATES: similar to AA sequence:RefSeq:WP_008005221.1
COORDINATES: similar to AA sequence:RefSeq:WP_007344137.1
COORDINATES: similar to AA sequence:RefSeq:WP_008849632.1
GO:0008237 - metallopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007188623.1
IS200/IS605-like element ISHma12 family transposase
COORDINATES: similar to AA sequence:RefSeq:WP_006884331.1
COORDINATES: similar to AA sequence:RefSeq:WP_015911446.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]
GO:0009307 - DNA restriction-modification system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014864286.1
GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008368050.1
COORDINATES: similar to AA sequence:RefSeq:WP_006825223.1
COORDINATES: similar to AA sequence:RefSeq:WP_005038771.1
COORDINATES: protein motif:HMM:NF024751.2
COORDINATES: similar to AA sequence:RefSeq:WP_008584152.1
COORDINATES: similar to AA sequence:RefSeq:WP_007344306.1
COORDINATES: similar to AA sequence:RefSeq:WP_006111960.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006627881.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
HAMP domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_007995695.1
COORDINATES: protein motif:HMM:NF014567.2
COORDINATES: protein motif:HMM:NF014566.2
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0071586 - CAAX-box protein processing [Evidence IEA]
type II CAAX endopeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006111968.1
COORDINATES: similar to AA sequence:RefSeq:WP_006111969.1
bacterio-opsin activator domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004041190.1
COORDINATES: protein motif:HMM:TIGR00229.1
COORDINATES: similar to AA sequence:RefSeq:WP_006627876.1
COORDINATES: similar to AA sequence:RefSeq:WP_011571520.1
COORDINATES: similar to AA sequence:RefSeq:WP_004595299.1
GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007141075.1
COORDINATES: similar to AA sequence:RefSeq:WP_007141074.1
COORDINATES: similar to AA sequence:RefSeq:WP_011571323.1
COORDINATES: similar to AA sequence:RefSeq:WP_006883881.1
COORDINATES: similar to AA sequence:RefSeq:WP_007344033.1
COORDINATES: similar to AA sequence:RefSeq:WP_015408486.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008308248.1
COORDINATES: similar to AA sequence:RefSeq:WP_011222774.1
COORDINATES: similar to AA sequence:RefSeq:WP_007977698.1
COORDINATES: similar to AA sequence:RefSeq:WP_007344161.1
COORDINATES: similar to AA sequence:RefSeq:WP_008367519.1
COORDINATES: similar to AA sequence:RefSeq:WP_004056430.1
COORDINATES: similar to AA sequence:RefSeq:WP_012289254.1
COORDINATES: similar to AA sequence:RefSeq:WP_008523636.1
COORDINATES: similar to AA sequence:RefSeq:WP_012945391.1
COORDINATES: similar to AA sequence:RefSeq:WP_006114738.1
ADP-ribosylglycohydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006111954.1
GO:0009318 - exodeoxyribonuclease VII complex [Evidence IEA]
GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO:0006308 - DNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008444145.1
COORDINATES: similar to AA sequence:RefSeq:WP_008313473.1
COORDINATES: similar to AA sequence:RefSeq:WP_008458786.1
COORDINATES: similar to AA sequence:RefSeq:WP_015763500.1
COORDINATES: similar to AA sequence:RefSeq:WP_007992706.1
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
nucleotidyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015788832.1
COORDINATES: similar to AA sequence:RefSeq:WP_008847120.1
COORDINATES: similar to AA sequence:RefSeq:WP_008439970.1
NAD(P)-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008847118.1
COORDINATES: similar to AA sequence:RefSeq:WP_008847117.1
COORDINATES: similar to AA sequence:RefSeq:WP_008439973.1
COORDINATES: similar to AA sequence:RefSeq:WP_011323238.1
COORDINATES: similar to AA sequence:RefSeq:WP_008439975.1
COORDINATES: similar to AA sequence:RefSeq:WP_008439976.1
COORDINATES: similar to AA sequence:RefSeq:WP_008439977.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
GO:0030001 - metal ion transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008847112.1
metal ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_018256472.1
COORDINATES: similar to AA sequence:RefSeq:WP_014555945.1
GO:0046872 - metal ion binding [Evidence IEA]
metal ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_008439983.1
cobalt-factor II C(20)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_008847107.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
iron-sulfur cluster assembly scaffold protein
COORDINATES: similar to AA sequence:RefSeq:WP_008847106.1
COORDINATES: similar to AA sequence:RefSeq:WP_008572359.1
COORDINATES: similar to AA sequence:RefSeq:WP_008847104.1
COORDINATES: similar to AA sequence:RefSeq:WP_008439991.1
COORDINATES: similar to AA sequence:RefSeq:WP_008439993.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041293.1
COORDINATES: similar to AA sequence:RefSeq:WP_006166239.1
COORDINATES: similar to AA sequence:RefSeq:WP_018257566.1
energy-coupling factor ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011571556.1
energy-coupling factor transporter transmembrane component T
COORDINATES: similar to AA sequence:RefSeq:WP_008439998.1
COORDINATES: similar to AA sequence:RefSeq:WP_008572369.1
energy-coupling factor ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_008443187.1
COORDINATES: similar to AA sequence:RefSeq:WP_014864028.1
COORDINATES: similar to AA sequence:RefSeq:WP_006630630.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008322053.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041006.1
COORDINATES: similar to AA sequence:RefSeq:WP_008847092.1
COORDINATES: protein motif:HMM:NF017394.2
nitrous oxide reductase accessory protein NosL
COORDINATES: similar to AA sequence:RefSeq:WP_008443195.1
COORDINATES: similar to AA sequence:RefSeq:WP_007999895.1
COORDINATES: similar to AA sequence:RefSeq:WP_017344325.1
COORDINATES: similar to AA sequence:RefSeq:WP_007344084.1
COORDINATES: similar to AA sequence:RefSeq:WP_005040628.1
COORDINATES: protein motif:HMM:NF036897.2
COORDINATES: similar to AA sequence:RefSeq:WP_008847012.1
COORDINATES: similar to AA sequence:RefSeq:WP_006630786.1
COORDINATES: similar to AA sequence:RefSeq:WP_006630785.1
COORDINATES: similar to AA sequence:RefSeq:WP_006630784.1
COORDINATES: similar to AA sequence:RefSeq:WP_008847016.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010890462.1
COORDINATES: similar to AA sequence:RefSeq:WP_007996031.1
COORDINATES: similar to AA sequence:RefSeq:WP_014556856.1
COORDINATES: similar to AA sequence:RefSeq:WP_004596962.1
COORDINATES: similar to AA sequence:RefSeq:WP_008847086.1
COORDINATES: similar to AA sequence:RefSeq:WP_008847085.1
COORDINATES: similar to AA sequence:RefSeq:WP_008847652.1
GO:0006935 - chemotaxis [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012289546.1
COORDINATES: similar to AA sequence:RefSeq:WP_015790086.1
COORDINATES: similar to AA sequence:RefSeq:WP_008442509.1
GAF domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_008443578.1
COORDINATES: protein motif:HMM:NF012245.2
COORDINATES: protein motif:HMM:NF016193.2
COORDINATES: similar to AA sequence:RefSeq:WP_004595446.1
COORDINATES: protein motif:HMM:TIGR02228.1
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004048766.1
SipW-dependent-type signal peptide-containing protein
COORDINATES: protein motif:HMM:NF024909.2
COORDINATES: similar to AA sequence:RefSeq:WP_004599858.1
COORDINATES: similar to AA sequence:RefSeq:WP_008366587.1
COORDINATES: protein motif:HMM:TIGR04088.1
COORDINATES: similar to AA sequence:RefSeq:WP_013035611.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007997412.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012660235.1
COORDINATES: similar to AA sequence:RefSeq:WP_008308304.1
COORDINATES: similar to AA sequence:RefSeq:WP_013878519.1
COORDINATES: similar to AA sequence:RefSeq:WP_013878518.1
COORDINATES: similar to AA sequence:RefSeq:WP_014030937.1
COORDINATES: similar to AA sequence:RefSeq:WP_013878515.1
BREX-5 system adenine-specific DNA-methyltransferase PglX
COORDINATES: similar to AA sequence:RefSeq:WP_008528542.1
COORDINATES: similar to AA sequence:RefSeq:WP_005538810.1
COORDINATES: similar to AA sequence:RefSeq:WP_014030942.1
COORDINATES: similar to AA sequence:RefSeq:WP_008446367.1
COORDINATES: similar to AA sequence:RefSeq:WP_014030944.1
COORDINATES: similar to AA sequence:RefSeq:WP_008583756.1
COORDINATES: similar to AA sequence:RefSeq:WP_015310305.1
COORDINATES: protein motif:HMM:NF024700.2
COORDINATES: similar to AA sequence:RefSeq:WP_012289077.1
COORDINATES: protein motif:HMM:NF024573.2
COORDINATES: similar to AA sequence:RefSeq:WP_008444876.1
COORDINATES: similar to AA sequence:RefSeq:WP_012289072.1
COORDINATES: similar to AA sequence:RefSeq:WP_020221432.1
COORDINATES: similar to AA sequence:RefSeq:WP_011571089.1
COORDINATES: similar to AA sequence:RefSeq:WP_015408940.1
COORDINATES: protein motif:HMM:NF019325.2
COORDINATES: protein motif:HMM:NF020084.2
FIST C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF024583.2
COORDINATES: similar to AA sequence:RefSeq:WP_004598934.1
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO:1905887 - autoinducer AI-2 transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006183382.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006630452.1
GO:0015297 - antiporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024883.2
COORDINATES: similar to AA sequence:RefSeq:WP_004061504.1
COORDINATES: similar to AA sequence:RefSeq:WP_004061502.1
GO:0016301 - kinase activity [Evidence IEA]
type II toxin-antitoxin system death-on-curing family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_004043292.1
COORDINATES: similar to AA sequence:RefSeq:WP_004971387.1
SWIM zinc finger domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004043411.1
COORDINATES: similar to AA sequence:RefSeq:WP_014732632.1
type II toxin-antitoxin system VapC family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_014865851.1
COORDINATES: protein motif:HMM:NF014860.2
rhodanese-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004968205.1
COORDINATES: similar to AA sequence:RefSeq:WP_008443297.1
COORDINATES: similar to AA sequence:RefSeq:WP_004048670.1
COORDINATES: similar to AA sequence:RefSeq:WP_011571363.1
COORDINATES: similar to AA sequence:RefSeq:WP_007188717.1
serine hydrolase domain-containing protein
COORDINATES: protein motif:HMM:NF014871.2
GO:0008253 - 5'-nucleotidase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0009166 - nucleotide catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024873.2
ribonuclease H-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012659934.1
COORDINATES: similar to AA sequence:RefSeq:WP_006180705.1
internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010904062.1
COORDINATES: protein motif:HMM:NF024627.2
right-handed parallel beta-helix repeat-containing protein
COORDINATES: protein motif:HMM:NF016362.2
COORDINATES: similar to AA sequence:RefSeq:WP_004595402.1
COORDINATES: similar to AA sequence:RefSeq:WP_008445938.1
COORDINATES: similar to AA sequence:RefSeq:WP_012659203.1
COORDINATES: similar to AA sequence:RefSeq:WP_006654219.1
COORDINATES: protein motif:HMM:NF019348.2
COORDINATES: similar to AA sequence:RefSeq:WP_009488264.1
COORDINATES: similar to AA sequence:RefSeq:WP_008440811.1
COORDINATES: similar to AA sequence:RefSeq:WP_014555655.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006054120.1
COORDINATES: similar to AA sequence:RefSeq:WP_009762306.1
6-pyruvoyl tetrahydropterin synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004595531.1
COORDINATES: similar to AA sequence:RefSeq:WP_004595530.1
GO:0008616 - queuosine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006112558.1
COORDINATES: similar to AA sequence:RefSeq:WP_004595529.1
ribbon-helix-helix domain-containing protein