Zymoseptoria tritici IPO323 chromosome 9, whole genome shotgun sequence.
Zymoseptoria tritici IPO323 (Mycosphaerella graminicola IPO323)
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Dothideomycetidae; Mycosphaerellales; Mycosphaerellaceae; Zymoseptoria.
Finished Genome of the Fungal Wheat Pathogen Mycosphaerella graminicola Reveals Dispensome Structure, Chromosome Plasticity, and Stealth Pathogenesis
Submitted (06-FEB-2020) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (18-MAY-2011) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CM001204.\nURL -- http://www.jgi.doe.gov/Mgraminicola\nJGI Project ID: 4000758\nThe DNA was provided by G.H.J. Kema (gert.kema@wur.nl)\nThe strain is available from Fungal Biodiversity Center,\nhttp://www.cbs.knaw.nl\nContacts: Stephen B. Goodwin (sgoodwin@purdue.edu)\n Gert H. J. Kema (gert.Kema@wur.nl)\n Igor Grigoriev (ivgrigoriev@lbl.gov)\nAssembly and annotation done by JGI.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: JAZZ v. 1.0\nAssembly Name :: MYCGR v2.0\nGenome Coverage :: 8.9X\nSequencing Technology :: Sanger\n##Genome-Assembly-Data-END##\n\n##Metadata-START##\nOrganism Display Name :: Mycosphaerella graminicola IPO323\nGOLD Stamp ID :: Gi00795\n##Metadata-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: INSDC submitter\nAnnotation Status :: Full annotation\nAnnotation Pipeline :: Eukaryotic Annotation Propagation Pipeline\n##Genome-Annotation-Data-END##
culture from epitype of Zymoseptoria tritici
small (306aa) secreted perotein, predicted. Probable M graminicola specific protein (novel gene). unknown function.
(NAD+); CoA-independent aldehyde dehydrogenase; m-methylbenzaldehyde dehydrogenase; NAD-aldehyde dehydrogenase; NAD-dependent 4-hydroxynonenal dehydrogenase; NAD-dependent aldehyde dehydrogenase; NAD-linked aldehyde dehydrogenase; propionaldehyde dehydrogenase; aldehyde dehydrogenase (NAD)
P450 potentially part of a terpene biosynthetic route. Multiple seq alignment and NJ analysis clustered this model with the model ESTEXT_FGENESH2_PM.C_120135 and gi 51490962 (or ABA2, ABA biosynthesis in B. cinerea)
Hydrophobin. Similar to class II hydrophobin.
conserved hypothetical protein; unknown function, predicted secreted
Related to mannosyltransferase alg2, belongs to Glycosyl transferase, group 1
MgRAS2 is a small GTPase localized to the plasma membrane and can be a positive regulator of either adenylyl cyclase or G-protein alpha subunit.
Polyphosphoinositide phosphatase, factor-induced gene 4
In Saccharomyces, this gene expresses a protein required for efficient mating, member of a family of eukaryotic proteins that contain a domain homologous to Sac1p
fungal transcriptional regulatory protein
P450 putatively acting on a cyclic terpene compound or moiety. p450 similar to GA14-synthase (gibberellin biosynthesis) and other p450s found next to terpene biosynthetic genes in other fungi. Similar to GW.6.229.1. Similarities were assessed both by multiple and local sequence alignments.
No reliable hits with protein databases, neither with hypothetical (not significant). Probable M graminicola specific protein (novel gene). unknown function.
mitochondrial distribution and morphology family 33, fungi
chromatin remodeling complex WSTF-ISWI, small subunit
ribose-5-phosphate isomerase; phosphopentosisomerase; phosphoriboisomerase; ribose phosphate isomerase; 5-phosphoribose isomerase; D-ribose 5-phosphate isomerase; D-ribose-5-phosphate ketol-isomeraseRibose 5-phospahte isomerase, in KEGG protein ribB is annotated (60782), additional ribA is present (41591)
ATP-binding cassette multidrug transporter
ABC-G family, PDR-type, TC3.A.1.205. Fused to the N-terminus a DIT1 motif is found, putatively involved in iron or stress metabolism. Only ortholog with same organization is found in F.graminearum.
conserved hypothetical protein, probable Alpha-1,2 mannosyltransferase
No Trp. No reliable hits with protein databases, neither with hypothetical (not significant). Probable M graminicola specific protein (novel gene). unknown function.
putative major facilitator superfamily transporter
MFS-MDR transporter belonging to the DHA2 subfamily. These type of MFS transporters are implicated in MDR and secretion of fungal secondary metabolites.
hypothetical protein, dipeptidase domain protein
Peptidase M28 (Pfam: PF04389) with predicted signal peptide.
serine/threonine-protein phosphatase 4 catalytic subunit
Component of the mitotic spindle, based on homology to S. cerevisiae
Ca2+-modulated nonselective cation channel polycystin
conserved hypothetical protein, secreted, unknown function
1,2-Alpha-Mannosidase (Glycosyl Hydrolase Family 47)
putative 1,3-beta-glucanosyltransferase. Extracellular, probably cell wall
HMMPfam hit to Peptidase_S28, Serine carboxypeptidase S28 with predicted signal peptide.
putative dual spec /; MgPTP1, putative dual spec
PRMT5 class Protein arginine N-methyltransferase
Putative alpha-1,2-mannosidase [Carbohydrate transport and metabolism]. Predicted signal peptide.
Beta-xylosidase, Glycosyl hydrolases family 43 (PF04616)
Histone H4; core histone required for chromatin assembly and chromosome function
thioesterase domain similar to those found in polyketide synthases but no other PKS domains evident
Large (600aa) protein; uncertain predicted location: cytoplasmic or secreted
large (924aa) secreted protein, predicted. Glycoside hydrolase, family 43 hydrolyzing O-glycosyl compounds. lighly acidic, pI 6.10. Lignocelluloses; probable involved in pathogenesis. With Biotechnology and Bioengineering applications.
IDI1, isopentenyl diphosphate:dimethylallyl diphosphate isomerase
Isopentenyl diphosphate:dimethylallyl diphosphate isomerase (IPP isomerase), catalyzes an essential activation step in the isoprenoid biosynthetic pathway
MgPP2Ac, protein phosphatase 2A catalytic sub-unit
protein phosphatase 2A catalytic sub-unit
P450 with unknown function. This model is located close to a dimethylallyl pyrophosphate isomerase. Multiple seq alignment and NJ analysis clustered this model with gi 83768858 (a p450 in a PKS cluster in A. oryzae) and the model ESTEXT_FGENESH2_PG.C_30483. The closest match among characterized p450 was cypX, (A.
A member of the MYST acetyltransferase family similar to the Saccharomyces cerevisiae ESA1 protein
Secreted chloroperoxidase, predicted. Peroxidase, family 2. The peroxidases in this family do not have similarity to other peroxidases. Hemoprotein, electron transfer. 426aa, pI 5.92; slighly acidic. Probable biotechnological applications.
SNF2 family DNA-dependent ATPase domain-containing protein
Secreted small (329aa) protein. Probable belongs to a family (lighly conservation with hypothetical fungal proteins)
secreted small (375aa) protein, predicted. No reliable hits with protein databases, neither with hypothetical (not significant match; just on Pro residues). Acidic, PI 5.36 Predicted highly glycosylated. Probable M graminicola specific protein (novel gene). unknown function.
ABC transporter domain-containing protein
Non-transporter ABC protein belonging to the NAP (non-intrinsic ABC protein) subfamily (cluster VI). This group consists of a single cytoplasmic NBF-domain.
bifunctional carbamoylphosphate synthetase/aspartate transcarbamylase
putative xylanase transcriptional regulator
Xylanase Transcriptional Regulator (Fungal Specific Transcription Factor) (Regulatory Protein)
hypothetical fungal conserved protein. Unknown function. Secreted. acidic, pI 5.37
predicted involved in secondary metabolite biosynthesis
cellobiose deshydrogenase/glucose-methanol-choline oxidoreductase
cellobiose dehydrogenase; GMC-oxred. Carbohydrate-binding module protein. This family of proteins bind FAD as a cofactor. Hemoflavoprotein. Electron transfer.Amino acid transport and metabolism. Energy production and conversion. Probable involved in pathogenesis.
UDP-galactose 4-epimerase; uridine diphosphoglucose epimerase; galactowaldenase; UDPG-4-epimerase; uridine diphosphate galactose 4-epimerase; uridine diphospho-galactose-4-epimerase; UDP-glucose epimerase; 4-epimerase; uridine diphosphoglucose 4-epimerase; uridine diphosphate glucose 4-epimerase; UDP-D-galactose 4-epimerase No Information about this Gene in Kegg
Unknown function, Similar to hypothetical protein Gibberella zeae (GENE ID: 2786497 FG05302.1)
conserved Het C protein, putative Heterokaryon incompatibility protein HetC
Shows similarity to SYN8 of C. albicans. Endosomal SNARE related to mammalian syntaxin 8.
Peptidase, S28. HMMPfam hit to Peptidase S28, PF05577 S28
Similar to TAO3p of S. cerevisiae, protein involved in cell morphogenesis and proliferation.
Dicer-Like; Dicer-like; similar to the Drosophila melanogaster gene Dicer, a multidomain ribonuclease essential for RNA silencing
proteasome regulatory particle subunit RPN1
A Serine/Threonine protein kinase related to S. cerevisiae Pkc1 in the cell wall integrity MAP kinase pathway. The hypothetical protein has several domains for example, Rho interacting domain at N-terminus, Cysteine-rich zinc binding regioin in the middle and a protein kinase catalytic domain at C-terminus.
Peptidase_S8, predicted. synonym carboxypeptidase S8; related to S53 protease family. Subtilase family. Serine protease. Subtilisin, kexin, sedolisin. predicted medium (608 aa) secreted protein with probable O-glycosylation at four Thr.
Phosphomevalonate kinase, an essential cytosolic enzyme that acts in the biosynthesis of isoprenoids and sterols, including ergosterol, from mevalonate
receptor-activated Ca2+-permeable channel
probable receptor-activated Ca2+-permeable cation channels
Actin-related protein; homolog of the Saccharomyces cerevisiae ARP3 which is required for the motility and integrity of actin patches
P450 putatively acting on a cyclic terpene compound or moiety. p450 similar to GA14-synthase (gibberellin biosynthesis) and other p450s found next to terpene biosynthetic genes in other fungi. Similar to e_gw.10.163.1. Similarities were assessed both by multiple and local seq alignments.
large secreted protein, predicted. No reliable hits with protein databases, neither with hypothetical (not significant). Probable M graminicola specific protein (novel gene). unknown function.
Small (270aa) secreted protein, predicted. unknown function. No hits with protein databases, neither with hypothetical. Probable M graminicola specific protein (novel gene).
putative aspartic proteinase, Asp superfam; Secreted
MFS-MDR transporter belonging to the DHA2 subfamily. These type of MFS transporters are implicated in MDR and secretion of fungal secondary metabolites. Shows sequence similarity to ARN1 of S. cerevisiae and MirB of E. nidulans. These are Major facilitator superfamily transporters which act with siderophores.
NPR1 nitrogen permease reactivator protein from HOG pathway
Nitrogen permease reactivator protein kinase
Sulphite reductase. Involved in sulphate reduction pathway. Catalyses reduction of sulphite to sulphide. crassa sulphite reductase.