Zymoseptoria tritici IPO323 chromosome 13, whole genome shotgun sequence.
Zymoseptoria tritici IPO323 (Mycosphaerella graminicola IPO323)
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Dothideomycetidae; Mycosphaerellales; Mycosphaerellaceae; Zymoseptoria.
Finished Genome of the Fungal Wheat Pathogen Mycosphaerella graminicola Reveals Dispensome Structure, Chromosome Plasticity, and Stealth Pathogenesis
Submitted (06-FEB-2020) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (18-MAY-2011) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CM001208.\nURL -- http://www.jgi.doe.gov/Mgraminicola\nJGI Project ID: 4000758\nThe DNA was provided by G.H.J. Kema (gert.kema@wur.nl)\nThe strain is available from Fungal Biodiversity Center,\nhttp://www.cbs.knaw.nl\nContacts: Stephen B. Goodwin (sgoodwin@purdue.edu)\n Gert H. J. Kema (gert.Kema@wur.nl)\n Igor Grigoriev (ivgrigoriev@lbl.gov)\nAssembly and annotation done by JGI.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: JAZZ v. 1.0\nAssembly Name :: MYCGR v2.0\nGenome Coverage :: 8.9X\nSequencing Technology :: Sanger\n##Genome-Assembly-Data-END##\n\n##Metadata-START##\nOrganism Display Name :: Mycosphaerella graminicola IPO323\nGOLD Stamp ID :: Gi00795\n##Metadata-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: INSDC submitter\nAnnotation Status :: Full annotation\nAnnotation Pipeline :: Eukaryotic Annotation Propagation Pipeline\n##Genome-Annotation-Data-END##
culture from epitype of Zymoseptoria tritici
conserved hypothetical protein, unknown function, similarto gi|171676304|ref|XP_001903105.1| unnamed protein product [Podospora anserina]
Similar to Saccharomyces cerevisiae SPT16 protein which is a subunit of the heterodimeric FACT complex (Spt16p-Pob3p). The yeast protein facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilizing and then reassembling nucleosome structure.
PAPS Reductase. Phosphoadenylphosphosulphate reductase. Reduses PAPS to sulphite. Involved in Sulphate reduction pathway
ATP Sulphurylase, sulphate reduction pathway. One of three genes essential for assimilatory reduction of sulfate to sulfide w/sulfite as an intermediate product. catalyzes the reaction of inorganic sulfate w/ATP to form adenosine-5'-phosphosulfate (APS) and pyrophosphate (PPi).
SLA2 protein homolog, cytoskeleton assembly protein, actin binding, involved in endocytosis, Epsin-N and I/LWEQ domains, synonym Mop2
ribosomal small subunit Rsm22, mitochondria
putative major facilitator superfamily transporter
MFS-MDR transporter belonging to the DHA2 subfamily. These type of MFS transporters are implicated in MDR and secretion of fungal secondary metabolites.
catalyzes the final step in ergosterol biosynthesis
In yeast the orthologous gene can be activated by Mtl1 receptor and is a GTPase-activating protein (RhoGAP) for Rho3p and Rho4p connected to cell wall integrity pathway involved in exocytosis
phosphoribosylaminoimidazolesuccinocarboxamide synthase
CALCIUM-ACTIVATED OUTWARD-RECTIFYING POTASSIUM CHANNEL WITH 9 TRANSMEMBRANE REGIONS.
required for posttranscriptional gene silencing and RNA interference RNA processing and modification; putative homolog of Neurospora crassa sad
Has EST support. EST support for first intron only
MgPali, Pali pH response regulator, membranes
APC5, anaphase promoting complex protein subunit 5
anaphase promoting complex protein, subunit 5, involved in cell cycle control, cell division and chromosome partitioning
DNA lyase, apurinic/apyrimidinic endo and exonuclease, involved in DNA repair
mating type protein MAT-1, with conserved DNA binding domain alpha box, transcription factor involved in sexual compatibility process
mitochondrial 37S ribosomal protein MRP2
predicted involved in secondary metabolite biosynthesis
P450 with unknown function. Possibly involved in the biosynthesis of a polyketide. This model is located next to a hybrid PKS-PS. It has very low similarity with known or predicted p450s
P450 potentially involved in the biosynthesis of a polyketide. This model is part of a PKS cluster
proteasome regulatory particle subunit RPN5
putative ferulic acid Esterase/Feruloyl esterase
Ferulic Acid Esterase/Feruloyl Esterase (Signal P secreted)
beta- (1,3) glucanosyltransferase. Related to Aspergillus fumigatus GEL1.
hypothetical protein, unknown function, may be realated to cycloisomerase 2 family
Alpha-Glucosidase (Signal P secreted) (Glycosyl Hydrolase Family 31)
Oligopeptide transporter superfamily protein (Pfam: PF03169) with 13 predicted transmembrane regions.
putative FRE ferric reductase-like transmembrane component
Similarity to S. cerevisiae FRE7 and other FRE proteins. Involved in iron uptake. Ferroxidase (FET)-dependent. Putative FRE Ferric reductase-like transmembrane component
COP9 signalosome complex subunit 2 (Signalosome subunit 2)
Putative chitin deacetylase; in yeast together with Cda2p involved in the biosynthesis ascospore wall component, chitosan; required for proper rigidity of the ascospore wall