Gymnogyps californianus isolate 813 chromosome 29, ASM1813914v2, whole genome shotgun sequence.
Gymnogyps californianus (California condor)
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Accipitriformes; Cathartidae; Gymnogyps.
Genome-wide diversity in the California condor tracks its prehistoric abundance and decline
REFSEQ INFORMATION: The reference sequence is identical to\nCM030830.2.\nAssembly name: ASM1813914v2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the University of California San\nFrancisco on 2022/09/01. The original whole-genome shotgun project\nhas the accession JAGKTE000000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: University of California San Francisco\nAssembly Method :: FALCON v. 2016; FALCON-Unzip v. 2016;\n Juicer v. 2019; 3D-DNA v. 2019; Juicebox\n Assembly Tools v. 2019\nAssembly Name :: ASM1813914v2\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 20.0x\nSequencing Technology :: PacBio RSII; Phase Genomics HiC\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Updated annotation\nAnnotation Name :: GCF_018139145.2-RS_2023_02\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Gnomon; cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 02/26/2023\n##Genome-Annotation-Data-END##
olfactory receptor 14J1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
Derived by automated computational analysis using gene prediction method: Gnomon.
olfactory receptor 10AG1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins
uncharacterized LOC127026878; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC127026879; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
MCL1 apoptosis regulator, BCL2 family member; Derived by automated computational analysis using gene prediction method: Gnomon.
MCL1 apoptosis regulator, BCL2 family member
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
induced myeloid leukemia cell differentiation protein Mcl-1
endosulfine alpha; Derived by automated computational analysis using gene prediction method: Gnomon.
COORDINATES: polyA evidence [ECO:0006239]
golgi phosphoprotein 3 like; Derived by automated computational analysis using gene prediction method: Gnomon.
golgi phosphoprotein 3 like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins
golgi phosphoprotein 3 like, transcript variant X1
HORMA domain containing 1; Derived by automated computational analysis using gene prediction method: Gnomon.
HORMA domain containing 1, transcript variant X2
HORMA domain containing 1, transcript variant X1
HORMA domain-containing protein 1 isoform X2
HORMA domain-containing protein 1 isoform X1
EF-hand calcium-binding domain-containing protein 12-like; Derived by automated computational analysis using gene prediction method: Gnomon.
EF-hand calcium-binding domain-containing protein 12-like
coiled-coil domain-containing protein 81-like; Derived by automated computational analysis using gene prediction method: Gnomon.
coiled-coil domain-containing protein 81-like
uncharacterized LOC127026882; Derived by automated computational analysis using gene prediction method: Gnomon.
KH domain containing 4, pre-mRNA splicing factor; Derived by automated computational analysis using gene prediction method: Gnomon.
KH domain containing 4, pre-mRNA splicing factor
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
small Cajal body-specific RNA 4; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.6:RF00423
Derived by automated computational analysis using gene prediction method: cmsearch.
Ras like without CAAX 1; Derived by automated computational analysis using gene prediction method: Gnomon.
Ras like without CAAX 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 58 Proteins
Ras like without CAAX 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
synaptotagmin 11; Derived by automated computational analysis using gene prediction method: Gnomon.
GON-4-like protein; Derived by automated computational analysis using gene prediction method: Gnomon.
GON-4-like protein, transcript variant X1
GON-4-like protein, transcript variant X3
GON-4-like protein, transcript variant X2
misato mitochondrial distribution and morphology regulator 1; Derived by automated computational analysis using gene prediction method: Gnomon.
misato mitochondrial distribution and morphology regulator 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins
death associated protein 3; Derived by automated computational analysis using gene prediction method: Gnomon.
death associated protein 3, transcript variant X1
death associated protein 3, transcript variant X3
death associated protein 3, transcript variant X5
death associated protein 3, transcript variant X4
death associated protein 3, transcript variant X2
death associated protein 3, transcript variant X6
28S ribosomal protein S29, mitochondrial isoform X1
28S ribosomal protein S29, mitochondrial isoform X2
ASH1 like histone lysine methyltransferase; Derived by automated computational analysis using gene prediction method: Gnomon.
ASH1 like histone lysine methyltransferase
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
histone-lysine N-methyltransferase ASH1L
RUN and SH3 domain containing 1; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: AP-4 complex accessory subunit RUSC1
farnesyl diphosphate synthase; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
hyperpolarization activated cyclic nucleotide gated potassium channel 3; Derived by automated computational analysis using gene prediction method: Gnomon.
hyperpolarization activated cyclic nucleotide gated potassium channel 3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3
CDC like kinase 2; Derived by automated computational analysis using gene prediction method: Gnomon.
CDC like kinase 2, transcript variant X1
CDC like kinase 2, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins
dual specificity protein kinase CLK2 isoform X1
dual specificity protein kinase CLK2 isoform X2
secretory carrier membrane protein 3; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: secretory carrier-associated membrane protein 3
endosomal transmembrane epsin interactor 3; Derived by automated computational analysis using gene prediction method: Gnomon.
endosomal transmembrane epsin interactor 3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
glucosylceramidase beta 1; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: lysosomal acid glucosylceramidase
lysosomal acid glucosylceramidase-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: lysosomal acid glucosylceramidase-like
uncharacterized LOC127027037; Derived by automated computational analysis using gene prediction method: Gnomon.
adenosine deaminase RNA specific; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
double-stranded RNA-specific adenosine deaminase
cholinergic receptor nicotinic beta 2 subunit; Derived by automated computational analysis using gene prediction method: Gnomon.
cholinergic receptor nicotinic beta 2 subunit
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 72 Proteins
neuronal acetylcholine receptor subunit beta-2
ubiquitin conjugating enzyme E2 Q1; Derived by automated computational analysis using gene prediction method: Gnomon.
ubiquitin associated protein 2 like; Derived by automated computational analysis using gene prediction method: Gnomon.
ubiquitin associated protein 2 like, transcript variant X5
ubiquitin associated protein 2 like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
ubiquitin associated protein 2 like, transcript variant X4
ubiquitin associated protein 2 like, transcript variant X3
ubiquitin associated protein 2 like, transcript variant X1
ubiquitin-associated protein 2-like isoform X5
ubiquitin-associated protein 2-like isoform X2
ubiquitin-associated protein 2-like isoform X4
ubiquitin-associated protein 2-like isoform X3
ubiquitin-associated protein 2-like isoform X1
small nucleolar RNA SNORA58; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.6:RF00418
chromosome 29 C1orf43 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
chromosome 29 C1orf43 homolog, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
chromosome 29 C1orf43 homolog, transcript variant X2
tropomyosin 3; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
signal sequence receptor subunit 2; Derived by automated computational analysis using gene prediction method: Gnomon.
signal sequence receptor subunit 2, transcript variant X2
signal sequence receptor subunit 2, transcript variant X3
signal sequence receptor subunit 2, transcript variant X4
signal sequence receptor subunit 2, transcript variant X1
translocon-associated protein subunit beta isoform X2
translocon-associated protein subunit beta isoform X1
translocon-associated protein subunit beta isoform X3
chaperonin containing TCP1 subunit 3; Derived by automated computational analysis using gene prediction method: Gnomon.
chaperonin containing TCP1 subunit 3, transcript variant X1
chaperonin containing TCP1 subunit 3, transcript variant X2
T-complex protein 1 subunit gamma isoform X1
T-complex protein 1 subunit gamma isoform X2
glycosylated lysosomal membrane protein; Derived by automated computational analysis using gene prediction method: Gnomon.
transmembrane protein 79; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
LOW QUALITY PROTEIN: transmembrane protein 79
SMG5 nonsense mediated mRNA decay factor; Derived by automated computational analysis using gene prediction method: Gnomon.
SMG5 nonsense mediated mRNA decay factor, transcript variant X1
SMG5 nonsense mediated mRNA decay factor, transcript variant X2
SMG5 nonsense mediated mRNA decay factor, transcript variant X4
SMG5 nonsense mediated mRNA decay factor, transcript variant X3
nonsense-mediated mRNA decay factor SMG5 isoform X1
nonsense-mediated mRNA decay factor SMG5 isoform X2
nonsense-mediated mRNA decay factor SMG5 isoform X4
nonsense-mediated mRNA decay factor SMG5 isoform X3
progestin and adipoQ receptor family member 6; Derived by automated computational analysis using gene prediction method: Gnomon.
progestin and adipoQ receptor family member 6
bone gamma-carboxyglutamate protein; Derived by automated computational analysis using gene prediction method: Gnomon.
polyamine modulated factor 1; Derived by automated computational analysis using gene prediction method: Gnomon.
solute carrier family 25 member 44; Derived by automated computational analysis using gene prediction method: Gnomon.
semaphorin 4A; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 5 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 5 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
lamin A/C; Derived by automated computational analysis using gene prediction method: Gnomon.
mex-3 RNA binding family member A; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
LOW QUALITY PROTEIN: RNA-binding protein MEX3A
ras-related protein Rab-11A-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 115 Proteins
RAB25, member RAS oncogene family; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 83 Proteins
late endosomal/lysosomal adaptor, MAPK and MTOR activator 2; Derived by automated computational analysis using gene prediction method: Gnomon.
late endosomal/lysosomal adaptor, MAPK and MTOR activator 2, transcript variant X2
late endosomal/lysosomal adaptor, MAPK and MTOR activator 2, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
ragulator complex protein LAMTOR2 isoform X2
ragulator complex protein LAMTOR2 isoform X1
ubiquilin 4; Derived by automated computational analysis using gene prediction method: Gnomon.
G-patch domain containing 4; Derived by automated computational analysis using gene prediction method: Gnomon.
NAD(P)HX epimerase; Derived by automated computational analysis using gene prediction method: Gnomon.
tetratricopeptide repeat domain 24; Derived by automated computational analysis using gene prediction method: Gnomon.
IQ motif containing GTPase activating protein 3; Derived by automated computational analysis using gene prediction method: Gnomon.
IQ motif containing GTPase activating protein 3
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: ras GTPase-activating-like protein IQGAP3
myocyte enhancer factor 2D; Derived by automated computational analysis using gene prediction method: Gnomon.
myocyte enhancer factor 2D, transcript variant X1
myocyte enhancer factor 2D, transcript variant X2
myocyte-specific enhancer factor 2D isoform X1
myocyte-specific enhancer factor 2D isoform X2
Rh family B glycoprotein; Derived by automated computational analysis using gene prediction method: Gnomon.
hyaluronan and proteoglycan link protein 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
hyaluronan and proteoglycan link protein 2-like
brevican core protein-like; Derived by automated computational analysis using gene prediction method: Gnomon.
proline rich mitotic checkpoint control factor; Derived by automated computational analysis using gene prediction method: Gnomon.
proline rich mitotic checkpoint control factor, transcript variant X2
proline rich mitotic checkpoint control factor, transcript variant X3
proline rich mitotic checkpoint control factor, transcript variant X1
SH2 domain containing 2A; Derived by automated computational analysis using gene prediction method: Gnomon.
death-associated protein kinase 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins
insulin receptor related receptor; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins
neurotrophic receptor tyrosine kinase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins
high affinity nerve growth factor receptor
death effector domain containing; Derived by automated computational analysis using gene prediction method: Gnomon.
death effector domain containing, transcript variant X1
death effector domain containing, transcript variant X2
death effector domain-containing protein isoform X1
death effector domain-containing protein isoform X2
nitrilase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
LOW QUALITY PROTEIN: deaminated glutathione amidase
prefoldin subunit 2; Derived by automated computational analysis using gene prediction method: Gnomon.
V-type proton ATPase catalytic subunit A-like; Derived by automated computational analysis using gene prediction method: Gnomon.
V-type proton ATPase catalytic subunit A-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
leucine rich repeat containing 71; Derived by automated computational analysis using gene prediction method: Gnomon.
leucine-rich repeat-containing protein 71
Rho guanine nucleotide exchange factor 11; Derived by automated computational analysis using gene prediction method: Gnomon.
Rho guanine nucleotide exchange factor 11
ETS translocation variant 3-like protein; Derived by automated computational analysis using gene prediction method: Gnomon.
ETS translocation variant 3-like protein
ETS translocation variant 3-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins
SLAM family member 9-like; Derived by automated computational analysis using gene prediction method: Gnomon.
SLAM family member 5-like; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC127026900; Derived by automated computational analysis using gene prediction method: Gnomon.
kirre like nephrin family adhesion molecule 1; Derived by automated computational analysis using gene prediction method: Gnomon.
kirre like nephrin family adhesion molecule 1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
LOW QUALITY PROTEIN: kin of IRRE-like protein 1
CD244 molecule; Derived by automated computational analysis using gene prediction method: Gnomon.
CD48 molecule; Derived by automated computational analysis using gene prediction method: Gnomon.
signaling lymphocytic activation molecule-like; Derived by automated computational analysis using gene prediction method: Gnomon.
signaling lymphocytic activation molecule-like
VANGL planar cell polarity protein 2; Derived by automated computational analysis using gene prediction method: Gnomon.
nescient helix-loop-helix 1; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
LOW QUALITY PROTEIN: helix-loop-helix protein 1
nicastrin; Derived by automated computational analysis using gene prediction method: Gnomon.
COPI coat complex subunit alpha; Derived by automated computational analysis using gene prediction method: Gnomon.
S100 calcium binding protein A11; Derived by automated computational analysis using gene prediction method: Gnomon.
repetin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
keratin-associated protein 10-4-like; Derived by automated computational analysis using gene prediction method: Gnomon.
proline-rich protein 9-like; Derived by automated computational analysis using gene prediction method: Gnomon.
keratinocyte proline-rich protein-like; Derived by automated computational analysis using gene prediction method: Gnomon.
keratin-associated protein 10-6-like; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC127026904; Derived by automated computational analysis using gene prediction method: Gnomon.
claw keratin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
scale keratin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins
feather keratin B-4-like; Derived by automated computational analysis using gene prediction method: Gnomon.
feather keratin 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
feather keratin 4-like; Derived by automated computational analysis using gene prediction method: Gnomon.
feather beta keratin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 Proteins
LOW QUALITY PROTEIN: feather beta keratin-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 49 Proteins
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins
keratin-associated protein 6-2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
probable peroxisomal membrane protein PEX13; Derived by automated computational analysis using gene prediction method: Gnomon.
probable peroxisomal membrane protein PEX13
loricrin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
keratin-associated protein 9-1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
DBF4-type zinc finger-containing protein 2 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
DBF4-type zinc finger-containing protein 2 homolog
protein MRP-126-like; Derived by automated computational analysis using gene prediction method: Gnomon.
protein S100-A12-like; Derived by automated computational analysis using gene prediction method: Gnomon.
protein S100-A9-like; Derived by automated computational analysis using gene prediction method: Gnomon.
protein S100-A4-like; Derived by automated computational analysis using gene prediction method: Gnomon.
protein S100-A2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
S100 calcium binding protein A16; Derived by automated computational analysis using gene prediction method: Gnomon.
S100 calcium binding protein A16, transcript variant X2
S100 calcium binding protein A16, transcript variant X1
protein S100-A14-like; Derived by automated computational analysis using gene prediction method: Gnomon.
S100 calcium binding protein A13; Derived by automated computational analysis using gene prediction method: Gnomon.
S100 calcium binding protein A1; Derived by automated computational analysis using gene prediction method: Gnomon.
chromatin target of PRMT1; Derived by automated computational analysis using gene prediction method: Gnomon.
translocase of outer mitochondrial membrane 40 like; Derived by automated computational analysis using gene prediction method: Gnomon.
translocase of outer mitochondrial membrane 40 like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon
LOW QUALITY PROTEIN: mitochondrial import receptor subunit TOM40B
nuclear receptor subfamily 1 group I member 3; Derived by automated computational analysis using gene prediction method: Gnomon.
nuclear receptor subfamily 1 group I member 3
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
LOW QUALITY PROTEIN: nuclear receptor subfamily 1 group I member 3
Purkinje cell protein 4 like 1; Derived by automated computational analysis using gene prediction method: Gnomon.
myelin protein zero; Derived by automated computational analysis using gene prediction method: Gnomon.
succinate dehydrogenase complex subunit C; Derived by automated computational analysis using gene prediction method: Gnomon.
succinate dehydrogenase complex subunit C, transcript variant X1
succinate dehydrogenase complex subunit C, transcript variant X2
succinate dehydrogenase complex subunit C, transcript variant X5
succinate dehydrogenase complex subunit C, transcript variant X6
succinate dehydrogenase cytochrome b560 subunit, mitochondrial isoform X1
succinate dehydrogenase cytochrome b560 subunit, mitochondrial isoform X2
succinate dehydrogenase cytochrome b560 subunit, mitochondrial isoform X4
succinate dehydrogenase cytochrome b560 subunit, mitochondrial isoform X5
succinate dehydrogenase complex subunit C, transcript variant X4
succinate dehydrogenase complex subunit C, transcript variant X3
succinate dehydrogenase cytochrome b560 subunit, mitochondrial isoform X3
cilia and flagella associated protein 126; Derived by automated computational analysis using gene prediction method: Gnomon.
cilia and flagella associated protein 126
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transfer RNA arginine (anticodon UCU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
uncharacterized LOC127026875; Derived by automated computational analysis using gene prediction method: Gnomon.
cell adhesion molecule 3; Derived by automated computational analysis using gene prediction method: Gnomon.
cell adhesion molecule 3, transcript variant X1
cell adhesion molecule 3, transcript variant X3
cell adhesion molecule 3, transcript variant X2
integrator complex subunit 3; Derived by automated computational analysis using gene prediction method: Gnomon.
integrator complex subunit 3, transcript variant X2
integrator complex subunit 3, transcript variant X1
solute carrier family 27 member 3; Derived by automated computational analysis using gene prediction method: Gnomon.
long-chain fatty acid transport protein 3
GATA zinc finger domain containing 2B; Derived by automated computational analysis using gene prediction method: Gnomon.
DENN domain containing 4B; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 2 bases in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: DENN domain-containing protein 4B
CREB regulated transcription coactivator 2; Derived by automated computational analysis using gene prediction method: Gnomon.
CREB regulated transcription coactivator 2
CREB-regulated transcription coactivator 2
solute carrier family 39 member 1; Derived by automated computational analysis using gene prediction method: Gnomon.
solute carrier family 39 member 1, transcript variant X2
solute carrier family 39 member 1, transcript variant X1
cAMP responsive element binding protein 3 like 4; Derived by automated computational analysis using gene prediction method: Gnomon.
cAMP responsive element binding protein 3 like 4
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
LOW QUALITY PROTEIN: cyclic AMP-responsive element-binding protein 3-like protein 4
jumping translocation breakpoint; Derived by automated computational analysis using gene prediction method: Gnomon.
RAB13, member RAS oncogene family; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 65 Proteins
ribosomal protein S27; Derived by automated computational analysis using gene prediction method: Gnomon.
extracellular matrix protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
threonyl-tRNA synthetase 2, mitochondrial; Derived by automated computational analysis using gene prediction method: Gnomon.
threonyl-tRNA synthetase 2, mitochondrial
regulation of nuclear pre-mRNA domain containing 2; Derived by automated computational analysis using gene prediction method: Gnomon.
regulation of nuclear pre-mRNA domain containing 2, transcript variant X4
regulation of nuclear pre-mRNA domain containing 2, transcript variant X2
regulation of nuclear pre-mRNA domain containing 2, transcript variant X3
regulation of nuclear pre-mRNA domain containing 2, transcript variant X1
regulation of nuclear pre-mRNA domain-containing protein 2 isoform X4
regulation of nuclear pre-mRNA domain-containing protein 2 isoform X2
regulation of nuclear pre-mRNA domain-containing protein 2 isoform X3
regulation of nuclear pre-mRNA domain-containing protein 2 isoform X1
pre-mRNA processing factor 3; Derived by automated computational analysis using gene prediction method: Gnomon.
pre-mRNA processing factor 3, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
pre-mRNA processing factor 3, transcript variant X2
U4/U6 small nuclear ribonucleoprotein Prp3
mitochondrial ribosomal protein S21; Derived by automated computational analysis using gene prediction method: Gnomon.
28S ribosomal protein S21, mitochondrial
uncharacterized LOC127027044; Derived by automated computational analysis using gene prediction method: Gnomon.
carbonic anhydrase 14; Derived by automated computational analysis using gene prediction method: Gnomon.
aph-1 homolog A, gamma-secretase subunit; Derived by automated computational analysis using gene prediction method: Gnomon.
aph-1 homolog A, gamma-secretase subunit
M1-specific T cell receptor beta chain-like; Derived by automated computational analysis using gene prediction method: Gnomon.
M1-specific T cell receptor beta chain-like
acidic nuclear phosphoprotein 32 family member E; Derived by automated computational analysis using gene prediction method: Gnomon.
acidic nuclear phosphoprotein 32 family member E, transcript variant X12
acidic nuclear phosphoprotein 32 family member E, transcript variant X4
acidic nuclear phosphoprotein 32 family member E, transcript variant X2
acidic nuclear phosphoprotein 32 family member E, transcript variant X8
acidic nuclear phosphoprotein 32 family member E, transcript variant X5
acidic nuclear phosphoprotein 32 family member E, transcript variant X6
acidic nuclear phosphoprotein 32 family member E, transcript variant X9
acidic nuclear phosphoprotein 32 family member E, transcript variant X1
acidic nuclear phosphoprotein 32 family member E, transcript variant X7
acidic nuclear phosphoprotein 32 family member E, transcript variant X10
acidic nuclear phosphoprotein 32 family member E, transcript variant X3
acidic nuclear phosphoprotein 32 family member E, transcript variant X11
acidic leucine-rich nuclear phosphoprotein 32 family member E isoform X4
acidic leucine-rich nuclear phosphoprotein 32 family member E isoform X12
acidic leucine-rich nuclear phosphoprotein 32 family member E isoform X2
acidic leucine-rich nuclear phosphoprotein 32 family member E isoform X8
acidic leucine-rich nuclear phosphoprotein 32 family member E isoform X5
acidic leucine-rich nuclear phosphoprotein 32 family member E isoform X6
acidic leucine-rich nuclear phosphoprotein 32 family member E isoform X9
acidic leucine-rich nuclear phosphoprotein 32 family member E isoform X1
acidic leucine-rich nuclear phosphoprotein 32 family member E isoform X7
acidic leucine-rich nuclear phosphoprotein 32 family member E isoform X10
acidic leucine-rich nuclear phosphoprotein 32 family member E isoform X3
acidic leucine-rich nuclear phosphoprotein 32 family member E isoform X11
pleckstrin homology domain containing O1; Derived by automated computational analysis using gene prediction method: Gnomon.
pleckstrin homology domain containing O1, transcript variant X2
pleckstrin homology domain containing O1, transcript variant X3
pleckstrin homology domain containing O1, transcript variant X1
pleckstrin homology domain-containing family O member 1 isoform X2
pleckstrin homology domain-containing family O member 1 isoform X3
pleckstrin homology domain-containing family O member 1 isoform X1
vacuolar protein sorting 45 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
vacuolar protein sorting-associated protein 45
uncharacterized LOC127027041; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC127027040; Derived by automated computational analysis using gene prediction method: Gnomon.
OTU deubiquitinase 7B; Derived by automated computational analysis using gene prediction method: Gnomon.
OTU deubiquitinase 7B, transcript variant X2
OTU deubiquitinase 7B, transcript variant X1
myotubularin related protein 11; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
LOW QUALITY PROTEIN: myotubularin-related protein 11
splicing factor 3b subunit 4; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: splicing factor 3B subunit 4
synaptic vesicle glycoprotein 2A; Derived by automated computational analysis using gene prediction method: Gnomon.
bolA family member 1; Derived by automated computational analysis using gene prediction method: Gnomon.
nuclear receptor subfamily 2 group F member 5-like; Derived by automated computational analysis using gene prediction method: Gnomon.
nuclear receptor subfamily 2 group F member 5-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins
LOW QUALITY PROTEIN: nuclear receptor subfamily 2 group F member 5-like
hemojuvelin BMP co-receptor; Derived by automated computational analysis using gene prediction method: Gnomon.
thioredoxin interacting protein; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins
LOW QUALITY PROTEIN: thioredoxin-interacting protein
peroxisomal biogenesis factor 11 beta; Derived by automated computational analysis using gene prediction method: Gnomon.
toll-like receptor 2; Derived by automated computational analysis using gene prediction method: Gnomon.
integrin subunit alpha 10; Derived by automated computational analysis using gene prediction method: Gnomon.
ring finger protein 115; Derived by automated computational analysis using gene prediction method: Gnomon.
RNA polymerase III subunit C; Derived by automated computational analysis using gene prediction method: Gnomon.
RNA polymerase III subunit C, transcript variant X1
DNA-directed RNA polymerase III subunit RPC3 isoform X1
RNA polymerase III subunit C, transcript variant X2
DNA-directed RNA polymerase III subunit RPC3 isoform X2
nudix hydrolase 17; Derived by automated computational analysis using gene prediction method: Gnomon.
nucleoside diphosphate-linked moiety X motif 17
protein inhibitor of activated STAT 3; Derived by automated computational analysis using gene prediction method: Gnomon.
protein inhibitor of activated STAT 3, transcript variant X1
protein inhibitor of activated STAT 3, transcript variant X3
protein inhibitor of activated STAT 3, transcript variant X2
ankyrin repeat domain 35; Derived by automated computational analysis using gene prediction method: Gnomon.
ankyrin repeat domain-containing protein 35
Rho/Rac guanine nucleotide exchange factor 2; Derived by automated computational analysis using gene prediction method: Gnomon.
Rho/Rac guanine nucleotide exchange factor 2
LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 2
translocon-associated protein subunit beta-like; Derived by automated computational analysis using gene prediction method: Gnomon.
translocon-associated protein subunit beta-like, transcript variant X1
translocon-associated protein subunit beta-like
translocon-associated protein subunit beta-like, transcript variant X2
cathepsin S-like; Derived by automated computational analysis using gene prediction method: Gnomon.
cathepsin S; Derived by automated computational analysis using gene prediction method: Gnomon.
cathepsin K; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 Proteins
aryl hydrocarbon receptor nuclear translocator; Derived by automated computational analysis using gene prediction method: Gnomon.
aryl hydrocarbon receptor nuclear translocator, transcript variant X8
aryl hydrocarbon receptor nuclear translocator, transcript variant X5
aryl hydrocarbon receptor nuclear translocator, transcript variant X2
aryl hydrocarbon receptor nuclear translocator, transcript variant X7
aryl hydrocarbon receptor nuclear translocator, transcript variant X4
aryl hydrocarbon receptor nuclear translocator, transcript variant X3
aryl hydrocarbon receptor nuclear translocator, transcript variant X6
aryl hydrocarbon receptor nuclear translocator, transcript variant X1
aryl hydrocarbon receptor nuclear translocator isoform X8
aryl hydrocarbon receptor nuclear translocator isoform X5
aryl hydrocarbon receptor nuclear translocator isoform X2
aryl hydrocarbon receptor nuclear translocator isoform X7
aryl hydrocarbon receptor nuclear translocator isoform X4
aryl hydrocarbon receptor nuclear translocator isoform X3
aryl hydrocarbon receptor nuclear translocator isoform X6
aryl hydrocarbon receptor nuclear translocator isoform X1
SET domain bifurcated histone lysine methyltransferase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
SET domain bifurcated histone lysine methyltransferase 1
histone-lysine N-methyltransferase SETDB1
ceramide synthase 2; Derived by automated computational analysis using gene prediction method: Gnomon.
MINDY lysine 48 deubiquitinase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
ubiquitin carboxyl-terminal hydrolase MINDY-1
prune exopolyphosphatase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
BCL2 interacting protein like; Derived by automated computational analysis using gene prediction method: Gnomon.
bcl-2/adenovirus E1B 19 kDa-interacting protein 2-like protein
CDC42 small effector 1; Derived by automated computational analysis using gene prediction method: Gnomon.
CDC42 small effector 1, transcript variant X1
CDC42 small effector 1, transcript variant X2
CDC42 small effector 1, transcript variant X3
MLLT11 transcription factor 7 cofactor; Derived by automated computational analysis using gene prediction method: Gnomon.
GA binding protein transcription factor subunit beta 2; Derived by automated computational analysis using gene prediction method: Gnomon.
GA binding protein transcription factor subunit beta 2
semaphorin 6C; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
LysM domain containing 1; Derived by automated computational analysis using gene prediction method: Gnomon.
lysM and putative peptidoglycan-binding domain-containing protein 1
sodium channel modifier 1; Derived by automated computational analysis using gene prediction method: Gnomon.
sodium channel modifier 1, transcript variant X1
sodium channel modifier 1, transcript variant X2
tropomodulin 4; Derived by automated computational analysis using gene prediction method: Gnomon.
vacuolar protein sorting 72 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 72 homolog
phosphatidylinositol-4-phosphate 5-kinase type 1 alpha; Derived by automated computational analysis using gene prediction method: Gnomon.
phosphatidylinositol-4-phosphate 5-kinase type 1 alpha, transcript variant X3
phosphatidylinositol-4-phosphate 5-kinase type 1 alpha, transcript variant X2
phosphatidylinositol-4-phosphate 5-kinase type 1 alpha, transcript variant X1
phosphatidylinositol 4-phosphate 5-kinase type-1 alpha isoform X3
phosphatidylinositol 4-phosphate 5-kinase type-1 alpha isoform X1
phosphatidylinositol 4-phosphate 5-kinase type-1 alpha isoform X2
proteasome 26S subunit ubiquitin receptor, non-ATPase 4; Derived by automated computational analysis using gene prediction method: Gnomon.
proteasome 26S subunit ubiquitin receptor, non-ATPase 4, transcript variant X3
proteasome 26S subunit ubiquitin receptor, non-ATPase 4, transcript variant X2
26S proteasome non-ATPase regulatory subunit 4 isoform X3
26S proteasome non-ATPase regulatory subunit 4 isoform X2
proteasome 26S subunit ubiquitin receptor, non-ATPase 4, transcript variant X1
26S proteasome non-ATPase regulatory subunit 4 isoform X1
zinc finger protein 687; Derived by automated computational analysis using gene prediction method: Gnomon.
phosphatidylinositol 4-kinase beta; Derived by automated computational analysis using gene prediction method: Gnomon.
phosphatidylinositol 4-kinase beta, transcript variant X3
phosphatidylinositol 4-kinase beta, transcript variant X1
phosphatidylinositol 4-kinase beta, transcript variant X2
phosphatidylinositol 4-kinase beta isoform X2
phosphatidylinositol 4-kinase beta isoform X1
regulatory factor X5; Derived by automated computational analysis using gene prediction method: Gnomon.
methanethiol oxidase-like; Derived by automated computational analysis using gene prediction method: Gnomon.
methanethiol oxidase-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins
methanethiol oxidase-like, transcript variant X1
pogo transposable element derived with ZNF domain; Derived by automated computational analysis using gene prediction method: Gnomon.
pogo transposable element derived with ZNF domain, transcript variant X2
pogo transposable element derived with ZNF domain, transcript variant X1
pogo transposable element derived with ZNF domain, transcript variant X3
pogo transposable element derived with ZNF domain, transcript variant X4
pogo transposable element derived with ZNF domain, transcript variant X6
pogo transposable element with ZNF domain isoform X2
pogo transposable element with ZNF domain isoform X1
pogo transposable element with ZNF domain isoform X3
pogo transposable element with ZNF domain isoform X4
pogo transposable element with ZNF domain isoform X6
pogo transposable element derived with ZNF domain, transcript variant X5
pogo transposable element with ZNF domain isoform X5
proteasome 20S subunit beta 4; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins
cingulin; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
tuftelin 1; Derived by automated computational analysis using gene prediction method: Gnomon.
sorting nexin 27; Derived by automated computational analysis using gene prediction method: Gnomon.
CUGBP Elav-like family member 3; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: CUGBP Elav-like family member 3