Gymnogyps californianus isolate 813 chromosome 25, ASM1813914v2, whole genome shotgun sequence.
Gymnogyps californianus (California condor)
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Accipitriformes; Cathartidae; Gymnogyps.
Genome-wide diversity in the California condor tracks its prehistoric abundance and decline
REFSEQ INFORMATION: The reference sequence is identical to\nCM030826.2.\nAssembly name: ASM1813914v2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the University of California San\nFrancisco on 2022/09/01. The original whole-genome shotgun project\nhas the accession JAGKTE000000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: University of California San Francisco\nAssembly Method :: FALCON v. 2016; FALCON-Unzip v. 2016;\n Juicer v. 2019; 3D-DNA v. 2019; Juicebox\n Assembly Tools v. 2019\nAssembly Name :: ASM1813914v2\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 20.0x\nSequencing Technology :: PacBio RSII; Phase Genomics HiC\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Updated annotation\nAnnotation Name :: GCF_018139145.2-RS_2023_02\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Gnomon; cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 02/26/2023\n##Genome-Annotation-Data-END##
uncharacterized LOC127025907; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC127025907, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC127025907, transcript variant X1
C2CD2 like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
dolichyl-phosphate N-acetylglucosaminephosphotransferase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
dolichyl-phosphate N-acetylglucosaminephosphotransferase 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase
histone H2A; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 53 Proteins
hydroxymethylbilane synthase; Derived by automated computational analysis using gene prediction method: Gnomon.
COORDINATES: polyA evidence [ECO:0006239]
VPS11 core subunit of CORVET and HOPS complexes; Derived by automated computational analysis using gene prediction method: Gnomon.
VPS11 core subunit of CORVET and HOPS complexes, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
VPS11 core subunit of CORVET and HOPS complexes, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
vacuolar protein sorting-associated protein 11 homolog isoform X2
vacuolar protein sorting-associated protein 11 homolog isoform X1
DEAD-box helicase 6; Derived by automated computational analysis using gene prediction method: Gnomon.
DEAD-box helicase 6, transcript variant X2
DEAD-box helicase 6, transcript variant X1
probable ATP-dependent RNA helicase DDX6 isoform X2
probable ATP-dependent RNA helicase DDX6 isoform X1
C-X-C motif chemokine receptor 5; Derived by automated computational analysis using gene prediction method: Gnomon.
BCL9 like; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: B-cell CLL/lymphoma 9-like protein
forkhead box R1; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
centrosomal AT-AC splicing factor; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: centrosomal AT-AC splicing factor
ribosomal protein S25; Derived by automated computational analysis using gene prediction method: Gnomon.
trafficking protein particle complex subunit 4; Derived by automated computational analysis using gene prediction method: Gnomon.
trafficking protein particle complex subunit 4, transcript variant X1
trafficking protein particle complex subunit 4, transcript variant X2
trafficking protein particle complex subunit 4, transcript variant X4
trafficking protein particle complex subunit 4, transcript variant X3
trafficking protein particle complex subunit 4, transcript variant X5
trafficking protein particle complex subunit 4 isoform X1
trafficking protein particle complex subunit 4 isoform X2
trafficking protein particle complex subunit 4 isoform X4
trafficking protein particle complex subunit 4 isoform X3
trafficking protein particle complex subunit 4 isoform X5
solute carrier family 37 member 4; Derived by automated computational analysis using gene prediction method: Gnomon.
solute carrier family 37 member 4, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
solute carrier family 37 member 4, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
glucose-6-phosphate exchanger SLC37A4 isoform X2
glucose-6-phosphate exchanger SLC37A4 isoform X1
hypoxia up-regulated 1; Derived by automated computational analysis using gene prediction method: Gnomon.
pleckstrin homology like domain family B member 1; Derived by automated computational analysis using gene prediction method: Gnomon.
pleckstrin homology like domain family B member 1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
LOW QUALITY PROTEIN: pleckstrin homology-like domain family B member 1
archain 1; Derived by automated computational analysis using gene prediction method: Gnomon.
intraflagellar transport 46; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
intraflagellar transport protein 46 homolog
transmembrane protein 25; Derived by automated computational analysis using gene prediction method: Gnomon.
tetratricopeptide repeat domain 36; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
lysine methyltransferase 2A; Derived by automated computational analysis using gene prediction method: Gnomon.
ATP synthase membrane subunit g; Derived by automated computational analysis using gene prediction method: Gnomon.
ubiquitination factor E4A; Derived by automated computational analysis using gene prediction method: Gnomon.
ubiquitination factor E4A, transcript variant X2
ubiquitination factor E4A, transcript variant X1
ubiquitin conjugation factor E4 A isoform X2
ubiquitin conjugation factor E4 A isoform X1
G protein-activated inward rectifier potassium channel 4-like; Derived by automated computational analysis using gene prediction method: Gnomon.
G protein-activated inward rectifier potassium channel 4-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 51 Proteins
putative claudin-24; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: putative claudin-24
ubiquitin specific peptidase 28; Derived by automated computational analysis using gene prediction method: Gnomon.
ubiquitin specific peptidase 28, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
ubiquitin specific peptidase 28, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
ubiquitin specific peptidase 28, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
ubiquitin carboxyl-terminal hydrolase 28 isoform X3
ubiquitin carboxyl-terminal hydrolase 28 isoform X2
ubiquitin carboxyl-terminal hydrolase 28 isoform X1
5-hydroxytryptamine receptor 3A-like; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger and BTB domain containing 16; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger and BTB domain containing 16, transcript variant X1
zinc finger and BTB domain containing 16, transcript variant X3
zinc finger and BTB domain containing 16, transcript variant X2
zinc finger and BTB domain-containing protein 16
nicotinamide N-methyltransferase; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins
RNA binding motif protein 7; Derived by automated computational analysis using gene prediction method: Gnomon.
RNA exonuclease 2; Derived by automated computational analysis using gene prediction method: Gnomon.
cell adhesion molecule 1; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC127025743; Derived by automated computational analysis using gene prediction method: Gnomon.
BUD13 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
ZPR1 zinc finger; Derived by automated computational analysis using gene prediction method: Gnomon.
apolipoprotein A5; Derived by automated computational analysis using gene prediction method: Gnomon.
apolipoprotein A4; Derived by automated computational analysis using gene prediction method: Gnomon.
apolipoprotein C3; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
LOW QUALITY PROTEIN: apolipoprotein C-III
apolipoprotein A1; Derived by automated computational analysis using gene prediction method: Gnomon.
SIK family kinase 3; Derived by automated computational analysis using gene prediction method: Gnomon.
SIK family kinase 3, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
SIK family kinase 3, transcript variant X4
SIK family kinase 3, transcript variant X2
SIK family kinase 3, transcript variant X3
serine/threonine-protein kinase SIK3 isoform X3
serine/threonine-protein kinase SIK3 isoform X2
serine/threonine-protein kinase SIK3 isoform X1
platelet activating factor acetylhydrolase 1b catalytic subunit 2; Derived by automated computational analysis using gene prediction method: Gnomon.
platelet activating factor acetylhydrolase 1b catalytic subunit 2
platelet-activating factor acetylhydrolase IB subunit alpha2
SID1 transmembrane family member 2; Derived by automated computational analysis using gene prediction method: Gnomon.
transgelin; Derived by automated computational analysis using gene prediction method: Gnomon.
proprotein convertase subtilisin/kexin type 7; Derived by automated computational analysis using gene prediction method: Gnomon.
proprotein convertase subtilisin/kexin type 7
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon
LOW QUALITY PROTEIN: proprotein convertase subtilisin/kexin type 7
centrosomal protein 164; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: centrosomal protein of 164 kDa
DS cell adhesion molecule like 1; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 1 codon
LOW QUALITY PROTEIN: cell adhesion molecule DSCAML1
uncharacterized LOC127025754; Derived by automated computational analysis using gene prediction method: Gnomon.
transmembrane serine protease 13; Derived by automated computational analysis using gene prediction method: Gnomon.
transmembrane serine protease 13, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins
transmembrane serine protease 13, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins
transmembrane protease serine 13 isoform X2
transmembrane protease serine 13 isoform X1
sodium channel subunit beta-2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
myelin protein zero-like protein 3; Derived by automated computational analysis using gene prediction method: Gnomon.
sodium voltage-gated channel beta subunit 4; Derived by automated computational analysis using gene prediction method: Gnomon.
sodium voltage-gated channel beta subunit 4
T-cell surface glycoprotein CD3 epsilon chain; Derived by automated computational analysis using gene prediction method: Gnomon.
T-cell surface glycoprotein CD3 epsilon chain
T-cell surface glycoprotein CD3 gamma chain-like; Derived by automated computational analysis using gene prediction method: Gnomon.
T-cell surface glycoprotein CD3 gamma chain-like, transcript variant X2
T-cell surface glycoprotein CD3 gamma chain-like, transcript variant X1
T-cell surface glycoprotein CD3 gamma chain-like isoform X2
T-cell surface glycoprotein CD3 gamma chain-like isoform X1
zw10 kinetochore protein; Derived by automated computational analysis using gene prediction method: Gnomon.
centromere/kinetochore protein zw10 homolog
transmembrane serine protease 5; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
uncharacterized LOC127025882; Derived by automated computational analysis using gene prediction method: Gnomon.
dopamine receptor D2; Derived by automated computational analysis using gene prediction method: Gnomon.
dopamine receptor D2, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
dopamine receptor D2, transcript variant X2
ankyrin repeat and kinase domain containing 1; Derived by automated computational analysis using gene prediction method: Gnomon.
ankyrin repeat and kinase domain containing 1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
LOW QUALITY PROTEIN: ankyrin repeat and protein kinase domain-containing protein 1
tetratricopeptide repeat domain 12; Derived by automated computational analysis using gene prediction method: Gnomon.
neural cell adhesion molecule 1; Derived by automated computational analysis using gene prediction method: Gnomon.
neural cell adhesion molecule 1, transcript variant X1
neural cell adhesion molecule 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
neural cell adhesion molecule 1 isoform X1
neural cell adhesion molecule 1 isoform X2
uncharacterized LOC127025879; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC127025879, transcript variant X1
uncharacterized LOC127025879, transcript variant X2
uncharacterized LOC127025835; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC127025836; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC127025914; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC127025914, transcript variant X1
uncharacterized LOC127025914, transcript variant X2
6-pyruvoyltetrahydropterin synthase; Derived by automated computational analysis using gene prediction method: Gnomon.
beta-carotene oxygenase 2; Derived by automated computational analysis using gene prediction method: Gnomon.
carotenoid-cleaving dioxygenase, mitochondrial
testis expressed 12; Derived by automated computational analysis using gene prediction method: Gnomon.
interleukin 18; Derived by automated computational analysis using gene prediction method: Gnomon.
succinate dehydrogenase complex subunit D; Derived by automated computational analysis using gene prediction method: Gnomon.
succinate dehydrogenase complex subunit D
succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial
NKAP domain containing 1; Derived by automated computational analysis using gene prediction method: Gnomon.
NKAP domain containing 1, transcript variant X3
NKAP domain containing 1, transcript variant X4
NKAP domain containing 1, transcript variant X2
NKAP domain containing 1, transcript variant X1
uncharacterized protein NKAPD1 isoform X4
uncharacterized protein NKAPD1 isoform X2
uncharacterized protein NKAPD1 isoform X1
uncharacterized protein NKAPD1 isoform X3
PIH1 domain containing 2; Derived by automated computational analysis using gene prediction method: Gnomon.
dihydrolipoamide S-acetyltransferase; Derived by automated computational analysis using gene prediction method: Gnomon.
dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial
DIX domain containing 1; Derived by automated computational analysis using gene prediction method: Gnomon.
DIX domain containing 1, transcript variant X1
DIX domain containing 1, transcript variant X2
chromosome 25 C11orf52 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized protein C11orf52 homolog
heat shock protein family B (small) member 2; Derived by automated computational analysis using gene prediction method: Gnomon.
heat shock protein family B (small) member 2
crystallin alpha B; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins
cilia and flagella associated protein 68; Derived by automated computational analysis using gene prediction method: Gnomon.
cilia and flagella associated protein 68
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
LOW QUALITY PROTEIN: UPF0686 protein C11orf1 homolog
ferredoxin-fold anticodon binding domain containing 1; Derived by automated computational analysis using gene prediction method: Gnomon.
ferredoxin-fold anticodon binding domain containing 1
ferredoxin-fold anticodon-binding domain-containing protein 1
ALG9 alpha-1,2-mannosyltransferase; Derived by automated computational analysis using gene prediction method: Gnomon.
salt inducible kinase 2; Derived by automated computational analysis using gene prediction method: Gnomon.
layilin; Derived by automated computational analysis using gene prediction method: Gnomon.
HOATZ cilia and flagella associated protein; Derived by automated computational analysis using gene prediction method: Gnomon.
HOATZ cilia and flagella associated protein
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: cilia- and flagella-associated protein HOATZ
BTG anti-proliferation factor 4; Derived by automated computational analysis using gene prediction method: Gnomon.
BTG anti-proliferation factor 4, transcript variant X1
BTG anti-proliferation factor 4, transcript variant X2
BTG anti-proliferation factor 4, transcript variant X3
BTG anti-proliferation factor 4, transcript variant X4
POU class 2 homeobox associating factor 1; Derived by automated computational analysis using gene prediction method: Gnomon.
POU class 2 homeobox associating factor 1
POU class 2 homeobox associating factor 3; Derived by automated computational analysis using gene prediction method: Gnomon.
POU class 2 homeobox associating factor 3
POU class 2 homeobox associating factor 2; Derived by automated computational analysis using gene prediction method: Gnomon.
POU class 2 homeobox associating factor 2
histone H4 transcription factor; Derived by automated computational analysis using gene prediction method: Gnomon.
histone H4 transcription factor, transcript variant X1
histone H4 transcription factor, transcript variant X2
histone H4 transcription factor isoform X1
histone H4 transcription factor isoform X2
ATP binding cassette subfamily G member 4; Derived by automated computational analysis using gene prediction method: Gnomon.
ATP binding cassette subfamily G member 4
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: ATP-binding cassette sub-family G member 4
NLR family member X1; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins
NHERF family PDZ scaffold protein 4; Derived by automated computational analysis using gene prediction method: Gnomon.
Na(+)/H(+) exchange regulatory cofactor NHE-RF4
coiled-coil domain containing 153; Derived by automated computational analysis using gene prediction method: Gnomon.
coiled-coil domain-containing protein 153
Cbl proto-oncogene; Derived by automated computational analysis using gene prediction method: Gnomon.
Cbl proto-oncogene, transcript variant X1
Cbl proto-oncogene, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
E3 ubiquitin-protein ligase CBL isoform X1
E3 ubiquitin-protein ligase CBL isoform X2
melanoma cell adhesion molecule; Derived by automated computational analysis using gene prediction method: Gnomon.
melanoma cell adhesion molecule, transcript variant X2
melanoma cell adhesion molecule, transcript variant X1
cell surface glycoprotein MUC18 isoform X1
cell surface glycoprotein MUC18 isoform X2
ring finger protein 26; Derived by automated computational analysis using gene prediction method: Gnomon.
C1q and TNF related 5; Derived by automated computational analysis using gene prediction method: Gnomon.
complement C1q tumor necrosis factor-related protein 5
membrane frizzled-related protein; Derived by automated computational analysis using gene prediction method: Gnomon.
ubiquitin specific peptidase 2; Derived by automated computational analysis using gene prediction method: Gnomon.
ubiquitin specific peptidase 2, transcript variant X2
ubiquitin specific peptidase 2, transcript variant X1
ubiquitin specific peptidase 2, transcript variant X3
ubiquitin carboxyl-terminal hydrolase 2 isoform X2
ubiquitin carboxyl-terminal hydrolase 2 isoform X1
ubiquitin carboxyl-terminal hydrolase 2 isoform X3
Thy-1 cell surface antigen; Derived by automated computational analysis using gene prediction method: Gnomon.
Thy-1 cell surface antigen, transcript variant X2
Thy-1 cell surface antigen, transcript variant X1
nectin cell adhesion molecule 1; Derived by automated computational analysis using gene prediction method: Gnomon.
nectin cell adhesion molecule 1, transcript variant X2
nectin cell adhesion molecule 1, transcript variant X1
uncharacterized LOC127025821; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC127025821, transcript variant X2
uncharacterized LOC127025821, transcript variant X1
tripartite motif containing 29; Derived by automated computational analysis using gene prediction method: Gnomon.
out at first homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
POU class 2 homeobox 3; Derived by automated computational analysis using gene prediction method: Gnomon.
POU domain, class 2, transcription factor 3
TLC domain-containing protein 5-like; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: TLC domain-containing protein 5-like
Rho guanine nucleotide exchange factor 12; Derived by automated computational analysis using gene prediction method: Gnomon.
Rho guanine nucleotide exchange factor 12, transcript variant X1
Rho guanine nucleotide exchange factor 12, transcript variant X2
rho guanine nucleotide exchange factor 12 isoform X1
rho guanine nucleotide exchange factor 12 isoform X2
glutamate ionotropic receptor kainate type subunit 4; Derived by automated computational analysis using gene prediction method: Gnomon.
glutamate ionotropic receptor kainate type subunit 4, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 88 Proteins
glutamate receptor ionotropic, kainate 4 isoform X1
glutamate ionotropic receptor kainate type subunit 4, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 73 Proteins
glutamate receptor ionotropic, kainate 4 isoform X2
tubulin folding cofactor E like; Derived by automated computational analysis using gene prediction method: Gnomon.
tubulin folding cofactor E like, transcript variant X2
tubulin folding cofactor E like, transcript variant X1
tubulin-specific chaperone cofactor E-like protein
tectorin alpha; Derived by automated computational analysis using gene prediction method: Gnomon.
sterol-C5-desaturase; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
LOW QUALITY PROTEIN: lathosterol oxidase
sortilin related receptor 1; Derived by automated computational analysis using gene prediction method: Gnomon.
ubiquitin associated and SH3 domain containing B; Derived by automated computational analysis using gene prediction method: Gnomon.
ubiquitin associated and SH3 domain containing B, transcript variant X1
ubiquitin-associated and SH3 domain-containing protein B isoform X1
ubiquitin associated and SH3 domain containing B, transcript variant X2
ubiquitin-associated and SH3 domain-containing protein B isoform X2
cytotoxic and regulatory T cell molecule; Derived by automated computational analysis using gene prediction method: Gnomon.
cytotoxic and regulatory T cell molecule
cytotoxic and regulatory T-cell molecule
junctional cadherin complex regulator; Derived by automated computational analysis using gene prediction method: Gnomon.
brain specific homeobox; Derived by automated computational analysis using gene prediction method: Gnomon.
heat shock protein family A (Hsp70) member 8; Derived by automated computational analysis using gene prediction method: Gnomon.
heat shock protein family A (Hsp70) member 8, transcript variant X2
heat shock protein family A (Hsp70) member 8, transcript variant X3
heat shock protein family A (Hsp70) member 8, transcript variant X1
heat shock cognate 71 kDa protein isoform X3
heat shock cognate 71 kDa protein isoform X2
heat shock cognate 71 kDa protein isoform X1
small nucleolar RNA SNORD14; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.6:RF00016
Derived by automated computational analysis using gene prediction method: cmsearch.
CXADR like membrane protein; Derived by automated computational analysis using gene prediction method: Gnomon.
CXADR like membrane protein, transcript variant X1
CXADR like membrane protein, transcript variant X2
GRAM domain containing 1B; Derived by automated computational analysis using gene prediction method: Gnomon.
GRAM domain containing 1B, transcript variant X3
GRAM domain containing 1B, transcript variant X1
GRAM domain containing 1B, transcript variant X2
GRAM domain containing 1B, transcript variant X7
GRAM domain containing 1B, transcript variant X6
GRAM domain containing 1B, transcript variant X4
GRAM domain containing 1B, transcript variant X5
uncharacterized LOC127025796; Derived by automated computational analysis using gene prediction method: Gnomon.
sodium voltage-gated channel beta subunit 3; Derived by automated computational analysis using gene prediction method: Gnomon.
sodium voltage-gated channel beta subunit 3
ATPase H+/K+ transporting non-gastric alpha2 subunit; Derived by automated computational analysis using gene prediction method: Gnomon.
ATPase H+/K+ transporting non-gastric alpha2 subunit
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 Proteins
potassium-transporting ATPase alpha chain 2
uncharacterized protein CXorf65 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC127025846; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC127025897; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC127025897, transcript variant X3
uncharacterized LOC127025897, transcript variant X2
uncharacterized LOC127025897, transcript variant X1
uncharacterized LOC127025917; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC127025917, transcript variant X2
uncharacterized LOC127025917, transcript variant X1
retinitis pigmentosa 1-like 1 protein; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC127025913; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC127025913, transcript variant X2
uncharacterized LOC127025913, transcript variant X1
uncharacterized LOC127025920; Derived by automated computational analysis using gene prediction method: Gnomon.
beta-1,3-glucuronyltransferase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins
galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1
beta-galactosidase-1-like protein 2; Derived by automated computational analysis using gene prediction method: Gnomon.
acyl-CoA dehydrogenase family member 8; Derived by automated computational analysis using gene prediction method: Gnomon.
isobutyryl-CoA dehydrogenase, mitochondrial
thymocyte nuclear protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
thymocyte nuclear protein 1, transcript variant X3
thymocyte nuclear protein 1, transcript variant X1
thymocyte nuclear protein 1, transcript variant X2
VPS26 retromer complex component B; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins
vacuolar protein sorting-associated protein 26B
non-SMC condensin II complex subunit D3; Derived by automated computational analysis using gene prediction method: Gnomon.
non-SMC condensin II complex subunit D3, transcript variant X4
non-SMC condensin II complex subunit D3, transcript variant X1
non-SMC condensin II complex subunit D3, transcript variant X3
non-SMC condensin II complex subunit D3, transcript variant X2
condensin-2 complex subunit D3 isoform X4
condensin-2 complex subunit D3 isoform X1
condensin-2 complex subunit D3 isoform X3
condensin-2 complex subunit D3 isoform X2
junctional adhesion molecule 3; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: junctional adhesion molecule C
immunoglobulin superfamily member 9B; Derived by automated computational analysis using gene prediction method: Gnomon.
spermatogenesis associated 19; Derived by automated computational analysis using gene prediction method: Gnomon.
spermatogenesis-associated protein 19, mitochondrial
opioid binding protein/cell adhesion molecule like; Derived by automated computational analysis using gene prediction method: Gnomon.
opioid binding protein/cell adhesion molecule like
opioid-binding protein/cell adhesion molecule
protein CEPU-1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
sorting nexin 19; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon
uncharacterized LOC127025890; Derived by automated computational analysis using gene prediction method: Gnomon.
ADAM metallopeptidase with thrombospondin type 1 motif 15; Derived by automated computational analysis using gene prediction method: Gnomon.
ADAM metallopeptidase with thrombospondin type 1 motif 15
A disintegrin and metalloproteinase with thrombospondin motifs 15
ADAM metallopeptidase with thrombospondin type 1 motif 8; Derived by automated computational analysis using gene prediction method: Gnomon.
ADAM metallopeptidase with thrombospondin type 1 motif 8
A disintegrin and metalloproteinase with thrombospondin motifs 8
zinc finger and BTB domain containing 44; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger and BTB domain containing 44, transcript variant X1
zinc finger and BTB domain containing 44, transcript variant X2
zinc finger and BTB domain containing 44, transcript variant X3
zinc finger and BTB domain containing 44, transcript variant X4
zinc finger and BTB domain-containing protein 44 isoform X1
zinc finger and BTB domain-containing protein 44 isoform X2
zinc finger and BTB domain-containing protein 44 isoform X3
zinc finger and BTB domain-containing protein 44 isoform X4
uncharacterized LOC127025881; Derived by automated computational analysis using gene prediction method: Gnomon.
ST14 transmembrane serine protease matriptase; Derived by automated computational analysis using gene prediction method: Gnomon.
ST14 transmembrane serine protease matriptase
nuclear factor related to kappaB binding protein; Derived by automated computational analysis using gene prediction method: Gnomon.
nuclear factor related to kappaB binding protein, transcript variant X2
nuclear factor related to kappaB binding protein, transcript variant X1
nuclear factor related to kappa-B-binding protein isoform X2
nuclear factor related to kappa-B-binding protein isoform X1
PR/SET domain 10; Derived by automated computational analysis using gene prediction method: Gnomon.
PR/SET domain 10, transcript variant X10
PR/SET domain 10, transcript variant X12
PR/SET domain 10, transcript variant X11
PR domain zinc finger protein 10 isoform X3
PR domain zinc finger protein 10 isoform X6
PR domain zinc finger protein 10 isoform X9
PR domain zinc finger protein 10 isoform X8
PR domain zinc finger protein 10 isoform X11
PR domain zinc finger protein 10 isoform X10
PR domain zinc finger protein 10 isoform X4
PR domain zinc finger protein 10 isoform X7
PR domain zinc finger protein 10 isoform X5
PR domain zinc finger protein 10 isoform X1
PR domain zinc finger protein 10 isoform X2
uncharacterized LOC127025919; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC127025919, transcript variant X1
uncharacterized LOC127025919, transcript variant X4
uncharacterized LOC127025919, transcript variant X2
uncharacterized LOC127025919, transcript variant X3
uncharacterized LOC127025918; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC127025918, transcript variant X1
uncharacterized LOC127025918, transcript variant X2
amyloid beta precursor like protein 2; Derived by automated computational analysis using gene prediction method: Gnomon.
amyloid beta precursor like protein 2, transcript variant X1
amyloid beta precursor like protein 2, transcript variant X2
amyloid beta precursor like protein 2 isoform X1
amyloid beta precursor like protein 2 isoform X2
transmembrane protein 45B-like; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
LOW QUALITY PROTEIN: transmembrane protein 45B-like
BARX homeobox 2; Derived by automated computational analysis using gene prediction method: Gnomon.
Rho GTPase activating protein 32; Derived by automated computational analysis using gene prediction method: Gnomon.
potassium inwardly rectifying channel subfamily J member 5; Derived by automated computational analysis using gene prediction method: Gnomon.
potassium inwardly rectifying channel subfamily J member 5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 61 Proteins
G protein-activated inward rectifier potassium channel 4
potassium inwardly rectifying channel subfamily J member 1; Derived by automated computational analysis using gene prediction method: Gnomon.
potassium inwardly rectifying channel subfamily J member 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins
ATP-sensitive inward rectifier potassium channel 1
Fli-1 proto-oncogene, ETS transcription factor; Derived by automated computational analysis using gene prediction method: Gnomon.
Fli-1 proto-oncogene, ETS transcription factor, transcript variant X4
Fli-1 proto-oncogene, ETS transcription factor, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins
Fli-1 proto-oncogene, ETS transcription factor, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins
Fli-1 proto-oncogene, ETS transcription factor, transcript variant X2
Friend leukemia integration 1 transcription factor isoform X4
Friend leukemia integration 1 transcription factor isoform X1
Friend leukemia integration 1 transcription factor isoform X3
Friend leukemia integration 1 transcription factor isoform X2
ETS proto-oncogene 1, transcription factor; Derived by automated computational analysis using gene prediction method: Gnomon.
ETS proto-oncogene 1, transcription factor, transcript variant X1
ETS proto-oncogene 1, transcription factor, transcript variant X2
ETS proto-oncogene 1, transcription factor, transcript variant X3
ETS proto-oncogene 1, transcription factor, transcript variant X4
kirre like nephrin family adhesion molecule 3; Derived by automated computational analysis using gene prediction method: Gnomon.
kirre like nephrin family adhesion molecule 3
uncharacterized LOC127025905; Derived by automated computational analysis using gene prediction method: Gnomon.
ST3 beta-galactoside alpha-2,3-sialyltransferase 4; Derived by automated computational analysis using gene prediction method: Gnomon.
ST3 beta-galactoside alpha-2,3-sialyltransferase 4, transcript variant X5
ST3 beta-galactoside alpha-2,3-sialyltransferase 4, transcript variant X4
ST3 beta-galactoside alpha-2,3-sialyltransferase 4, transcript variant X3
ST3 beta-galactoside alpha-2,3-sialyltransferase 4, transcript variant X2
ST3 beta-galactoside alpha-2,3-sialyltransferase 4, transcript variant X1
CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4 isoform X2
CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4 isoform X1
CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4 isoform X3
decapping enzyme, scavenger; Derived by automated computational analysis using gene prediction method: Gnomon.
TIR domain containing adaptor protein; Derived by automated computational analysis using gene prediction method: Gnomon.
toll/interleukin-1 receptor domain-containing adapter protein
cryptochrome-2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
family with sequence similarity 118 member B; Derived by automated computational analysis using gene prediction method: Gnomon.
family with sequence similarity 118 member B
SRP receptor subunit alpha; Derived by automated computational analysis using gene prediction method: Gnomon.
SRP receptor subunit alpha, transcript variant X3
SRP receptor subunit alpha, transcript variant X1
SRP receptor subunit alpha, transcript variant X2
signal recognition particle receptor subunit alpha isoform X3
signal recognition particle receptor subunit alpha isoform X1
signal recognition particle receptor subunit alpha isoform X2
FAD dependent oxidoreductase domain containing 1; Derived by automated computational analysis using gene prediction method: Gnomon.
FAD dependent oxidoreductase domain containing 1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
LOW QUALITY PROTEIN: FAD-dependent oxidoreductase domain-containing protein 1
EI24 autophagy associated transmembrane protein; Derived by automated computational analysis using gene prediction method: Gnomon.
EI24 autophagy associated transmembrane protein
STT3 oligosaccharyltransferase complex catalytic subunit A; Derived by automated computational analysis using gene prediction method: Gnomon.
STT3 oligosaccharyltransferase complex catalytic subunit A, transcript variant X2
STT3 oligosaccharyltransferase complex catalytic subunit A, transcript variant X1
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A
checkpoint kinase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
checkpoint kinase 1, transcript variant X1
checkpoint kinase 1, transcript variant X2
serine/threonine-protein kinase Chk1 isoform X1
serine/threonine-protein kinase Chk1 isoform X2
cell adhesion associated, oncogene regulated; Derived by automated computational analysis using gene prediction method: Gnomon.
cell adhesion associated, oncogene regulated
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
LOW QUALITY PROTEIN: cell adhesion molecule-related/down-regulated by oncogenes
V-set and immunoglobulin domain containing 10 like 2; Derived by automated computational analysis using gene prediction method: Gnomon.
V-set and immunoglobulin domain containing 10 like 2
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
LOW QUALITY PROTEIN: V-set and immunoglobulin domain-containing protein 10-like 2
DEAD-box helicase 25; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins
HYLS1 centriolar and ciliogenesis associated; Derived by automated computational analysis using gene prediction method: Gnomon.
HYLS1 centriolar and ciliogenesis associated
centriolar and ciliogenesis-associated protein HYLS1
pseudouridine synthase 3; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudouridine synthase 3, transcript variant X2
pseudouridine synthase 3, transcript variant X1
tRNA pseudouridine(38/39) synthase isoform X2
tRNA pseudouridine(38/39) synthase isoform X1
RNA pseudouridine synthase D4; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudouridylate synthase RPUSD4, mitochondrial
pannexin 3; Derived by automated computational analysis using gene prediction method: Gnomon.
sialic acid acetylesterase; Derived by automated computational analysis using gene prediction method: Gnomon.
neurogranin; Derived by automated computational analysis using gene prediction method: Gnomon.
endothelial cell adhesion molecule; Derived by automated computational analysis using gene prediction method: Gnomon.
endothelial cell-selective adhesion molecule
Myb/SANT DNA binding domain containing 2; Derived by automated computational analysis using gene prediction method: Gnomon.
Myb/SANT DNA binding domain containing 2
myb/SANT-like DNA-binding domain-containing protein 2