Gymnogyps californianus isolate 813 chromosome 8, ASM1813914v2, whole genome shotgun sequence.
type: Entry
definition: Gymnogyps californianus isolate 813 chromosome 8, ASM1813914v2, whole genome shotgun sequence.
sequence version: NC_059478.1
sequence date: 2023-02-27
sequence: sequence
division: CON
label: NC_059478.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA789573
dblink: SAMN18477433
keyword: WGS
keyword: RefSeq
source: Gymnogyps californianus (California condor)
organism: Gymnogyps californianus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Accipitriformes; Cathartidae; Gymnogyps.
reference: 1
references: 33989525
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM030809.2.\nAssembly name: ASM1813914v2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the University of California San\nFrancisco on 2022/09/01. The original whole-genome shotgun project\nhas the accession JAGKTE000000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: University of California San Francisco\nAssembly Method :: FALCON v. 2016; FALCON-Unzip v. 2016;\n Juicer v. 2019; 3D-DNA v. 2019; Juicebox\n Assembly Tools v. 2019\nAssembly Name :: ASM1813914v2\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 20.0x\nSequencing Technology :: PacBio RSII; Phase Genomics HiC\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Updated annotation\nAnnotation Name :: GCF_018139145.2-RS_2023_02\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Gnomon; cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 02/26/2023\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 37086032
topology: linear
so has quality: SO_0000987
location: 1..37086032
location: region:1-37086032:1
RO_0002162: 33616

NC_059478
type: RefSeq
SIO_000068: refseq

PRJNA789573
type: BioProject
SIO_000068: bioproject

SAMN18477433
type: BioSample
SIO_000068: biosample

1
title: Genome-wide diversity in the California condor tracks its prehistoric abundance and decline
author: Robinson, J.A.
author: Bowie, R.C.K.
author: Dudchenko, O.
author: Aiden, E.L.
author: Hendrickson, S.L.
author: Steiner, C.C.
author: Ryder, O.A.
author: Mindell, D.P.
author: Wall, J.D.
journal: Curr Biol
volume: 31
issue: 13
pages: 2939-2946
year: 2021
pubmed: 33989525

33989525
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37086032:1
position: 37086032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-37086032:1:source
so part of: sequence
organism: Gymnogyps californianus
mol type: genomic DNA
isolate: 813
chromosome: 8
sex: female
dev stage: chick

33616
type: Taxonomy
SIO_000068: taxonomy

BRINP3
type: Gene
subclass of: SO_0000704
RO_0002162: 33616
gene: BRINP3
note: BMP/retinoic acid inducible neural specific 3; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 941400..1149301
location: region:941400-1149301:1
so has part: feature:941400-1149301:1:exon
subclass of: SO_0000010

127019225
type: Gene
SIO_000068: ncbigene

position:941400:1
position: 941400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1149301:1
position: 1149301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:941400-1149301:1:exon

BRINP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: BRINP3
product: BMP/retinoic acid inducible neural specific 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins
transcript id: XM_050901189.1
SIO_010081: BRINP3
subclass of: SO_0000673
so part of: BRINP3
location: join(941400..941635,1049139..1049329,1059147..1059337,1080692..1080797,1083759..1083995,1105993..1106215,1148012..1149301)
location: region:941400-1149301:1
so has part: feature:941400-941635:1:exon
so has part: feature:1049139-1049329:1:exon
so has part: feature:1059147-1059337:1:exon
so has part: feature:1080692-1080797:1:exon
so has part: feature:1083759-1083995:1:exon
so has part: feature:1105993-1106215:1:exon
so has part: feature:1148012-1149301:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:941400-941635:1:exon

position:941635:1
position: 941635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1049139-1049329:1:exon

position:1049139:1
position: 1049139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1049329:1
position: 1049329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1059147-1059337:1:exon

position:1059147:1
position: 1059147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1059337:1
position: 1059337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1080692-1080797:1:exon

position:1080692:1
position: 1080692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1080797:1
position: 1080797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1083759-1083995:1:exon

position:1083759:1
position: 1083759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1083995:1
position: 1083995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1105993-1106215:1:exon

position:1105993:1
position: 1105993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1106215:1
position: 1106215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1148012-1149301:1:exon

position:1148012:1
position: 1148012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BRINP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: BRINP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BMP/retinoic acid-inducible neural-specific protein 3 isoform X1
translation: MIWRCSAGAELFSLMALWEWIALSLHCWVLAVAAVSDQHATSPFDWLLSDKGPFHRSQEYTDFVDRSRQGFSTRYKIYREFGRWKVNNLAVERRNFLGSPLPLAPEFFRNIRLLGRRPTLQQITENLIKKYGTHFLLSATLGGEESLTIFVDKRKLSKRSEGSDPSTNSSAVTLETLHQLAASYFIDRDSTLRRLHHIQIASTAIKVTETRTGPLGCSNYDNLDSVSSVLVQSPENKIQLQGLQIILPEYLQEHFVQAALSYIACNSEGEFICKDNDCWCQCGPKFPECNCPYMDIQAMEENLLRISETWNAYNSEFEESDEFKLFMKRLPMNYFLNTSTVMHLWTMDSNFQRRYEQLENSMKQLFLKAQKTVHKLFGLSKRCHKQPLIRMPRQRSSNYWLNRIQSFLYCNENGLLGSFSEETHTCTCPNDQVACHGFLPCTVGDGSACLSCAPDNRTRCGSCNAGYMLSQGLCKPEVAESTEHYIGFETDLQDLEMKYLLQKTDRRIEVHAIFISNDMRLNSWFDPSWRKRMLLTLKSNKYKSSLVHMILGLSLQICLTKNSTLEPVLAVYVNPFGGSHSESWFMPVNENNFPDWERTKLDLPLQCYNWTLTLGNKWKTFFETVHIYLRSRIKSNGPNGNESIYYEPLEFIDPSRNLGYMKINNIQVFGYSMHFDPEAIRDLILQLDYPYTQGSQDSALLQLLEIRDRVNKLSPPGQRRLDLFSCLLRHRLKLSTSEVVRIQSALQAFNAKLPNTVDYDTTKLCS
SIO_010081: BRINP3
subclass of: SO_0000673
so part of: BRINP3
location: join(941400..941635,1049139..1049329,1059147..1059337,1080692..1080797,1083759..1083995,1105993..1106215,1148012..1149128)
location: region:941400-1149128:1
so has part: feature:941400-941635:1:exon
so has part: feature:1049139-1049329:1:exon
so has part: feature:1059147-1059337:1:exon
so has part: feature:1080692-1080797:1:exon
so has part: feature:1083759-1083995:1:exon
so has part: feature:1105993-1106215:1:exon
so has part: feature:1148012-1149128:1:exon

XP_050757146.1
type: Protein
SIO_000068: ncbiprotein

position:1149128:1
position: 1149128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:941400-941635:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1049139-1049329:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1059147-1059337:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1080692-1080797:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1083759-1083995:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1105993-1106215:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1148012-1149128:1:exon

BRINP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: BRINP3
product: BMP/retinoic acid inducible neural specific 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_050901190.1
SIO_010081: BRINP3
subclass of: SO_0000673
so part of: BRINP3
location: join(941515..941635,1059147..1059337,1080692..1080797,1083759..1083995,1105993..1106215,1148012..1149301)
location: region:941515-1149301:1
so has part: feature:941515-941635:1:exon
so has part: feature:1059147-1059337:1:exon
so has part: feature:1080692-1080797:1:exon
so has part: feature:1083759-1083995:1:exon
so has part: feature:1105993-1106215:1:exon
so has part: feature:1148012-1149301:1:exon

position:941515:1
position: 941515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:941515-941635:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1059147-1059337:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1080692-1080797:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1083759-1083995:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1105993-1106215:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1148012-1149301:1:exon

BRINP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: BRINP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BMP/retinoic acid-inducible neural-specific protein 3 isoform X2
translation: MPQAPSTGSSLIRDPSIAHRNTQILWTEVDRDLAQDTRFTGEESLTIFVDKRKLSKRSEGSDPSTNSSAVTLETLHQLAASYFIDRDSTLRRLHHIQIASTAIKVTETRTGPLGCSNYDNLDSVSSVLVQSPENKIQLQGLQIILPEYLQEHFVQAALSYIACNSEGEFICKDNDCWCQCGPKFPECNCPYMDIQAMEENLLRISETWNAYNSEFEESDEFKLFMKRLPMNYFLNTSTVMHLWTMDSNFQRRYEQLENSMKQLFLKAQKTVHKLFGLSKRCHKQPLIRMPRQRSSNYWLNRIQSFLYCNENGLLGSFSEETHTCTCPNDQVACHGFLPCTVGDGSACLSCAPDNRTRCGSCNAGYMLSQGLCKPEVAESTEHYIGFETDLQDLEMKYLLQKTDRRIEVHAIFISNDMRLNSWFDPSWRKRMLLTLKSNKYKSSLVHMILGLSLQICLTKNSTLEPVLAVYVNPFGGSHSESWFMPVNENNFPDWERTKLDLPLQCYNWTLTLGNKWKTFFETVHIYLRSRIKSNGPNGNESIYYEPLEFIDPSRNLGYMKINNIQVFGYSMHFDPEAIRDLILQLDYPYTQGSQDSALLQLLEIRDRVNKLSPPGQRRLDLFSCLLRHRLKLSTSEVVRIQSALQAFNAKLPNTVDYDTTKLCS
SIO_010081: BRINP3
subclass of: SO_0000673
so part of: BRINP3
location: join(941515..941635,1059147..1059337,1080692..1080797,1083759..1083995,1105993..1106215,1148012..1149128)
location: region:941515-1149128:1
so has part: feature:941515-941635:1:exon
so has part: feature:1059147-1059337:1:exon
so has part: feature:1080692-1080797:1:exon
so has part: feature:1083759-1083995:1:exon
so has part: feature:1105993-1106215:1:exon
so has part: feature:1148012-1149128:1:exon

XP_050757147.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:941515-941635:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1059147-1059337:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1080692-1080797:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1083759-1083995:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1105993-1106215:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1148012-1149128:1:exon

LOC127019117
type: Gene
subclass of: SO_0000704
RO_0002162: 33616
gene: LOC127019117
note: uncharacterized LOC127019117; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2139131..2141087)
location: region:2139131-2141087:-1
so has part: feature:2139131-2141087:-1:exon
subclass of: SO_0000011

127019117
type: Gene
SIO_000068: ncbigene

position:2139131:-1
position: 2139131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2141087:-1
position: 2141087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2139131-2141087:-1:exon

LOC127019117
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 33616
nc RNA class: lncRNA
gene: LOC127019117
product: uncharacterized LOC127019117
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_007766863.1
SIO_010081: LOC127019117
subclass of: SO_0000673
so part of: LOC127019117
location: complement(join(2139131..2139829,2139982..2140140,2140281..2141087))
location: region:2139131-2141087:-1
so has part: feature:2140281-2141087:-1:exon
so has part: feature:2139982-2140140:-1:exon
so has part: feature:2139131-2139829:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2140281-2141087:-1:exon

position:2140281:-1
position: 2140281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2139982-2140140:-1:exon

position:2139982:-1
position: 2139982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2140140:-1
position: 2140140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2139131-2139829:-1:exon

position:2139829:-1
position: 2139829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC127018807
type: Gene
subclass of: SO_0000704
RO_0002162: 33616
gene: LOC127018807
note: uncharacterized LOC127018807; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2252292..2255518)
location: region:2252292-2255518:-1
so has part: feature:2252292-2255518:-1:exon
subclass of: SO_0000011

127018807
type: Gene
SIO_000068: ncbigene

position:2252292:-1
position: 2252292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2255518:-1
position: 2255518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2252292-2255518:-1:exon

LOC127018807
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 33616
nc RNA class: lncRNA
gene: LOC127018807
product: uncharacterized LOC127018807
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_007766840.1
SIO_010081: LOC127018807
subclass of: SO_0000673
so part of: LOC127018807
location: complement(join(2252292..2252484,2252959..2253036,2255466..2255518))
location: region:2252292-2255518:-1
so has part: feature:2255466-2255518:-1:exon
so has part: feature:2252959-2253036:-1:exon
so has part: feature:2252292-2252484:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2255466-2255518:-1:exon

position:2255466:-1
position: 2255466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2252959-2253036:-1:exon

position:2252959:-1
position: 2252959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2253036:-1
position: 2253036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2252292-2252484:-1:exon

position:2252484:-1
position: 2252484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PLA2G4A
type: Gene
subclass of: SO_0000704
RO_0002162: 33616
gene: PLA2G4A
note: phospholipase A2 group IVA; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2572016..2658461)
location: region:2572016-2658461:-1
so has part: feature:2572016-2658461:-1:exon
subclass of: SO_0000010

127019327
type: Gene
SIO_000068: ncbigene

position:2572016:-1
position: 2572016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2658461:-1
position: 2658461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2572016-2658461:-1:exon

PLA2G4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: PLA2G4A
product: phospholipase A2 group IVA
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_050901323.1
SIO_010081: PLA2G4A
subclass of: SO_0000673
so part of: PLA2G4A
location: complement(join(2572016..2574683,2575988..2576145,2576356..2576551,2579035..2579219,2584506..2584748,2586771..2586842,2589721..2589813,2590134..2590271,2594517..2594631,2596056..2596278,2600291..2600427,2608462..2608603,2610794..2610831,2614058..2614171,2617782..2617930,2633712..2633793,2641437..2641577,2641738..2641840,2658427..2658461))
location: region:2572016-2658461:-1
so has part: feature:2658427-2658461:-1:exon
so has part: feature:2641738-2641840:-1:exon
so has part: feature:2641437-2641577:-1:exon
so has part: feature:2633712-2633793:-1:exon
so has part: feature:2617782-2617930:-1:exon
so has part: feature:2614058-2614171:-1:exon
so has part: feature:2610794-2610831:-1:exon
so has part: feature:2608462-2608603:-1:exon
so has part: feature:2600291-2600427:-1:exon
so has part: feature:2596056-2596278:-1:exon
so has part: feature:2594517-2594631:-1:exon
so has part: feature:2590134-2590271:-1:exon
so has part: feature:2589721-2589813:-1:exon
so has part: feature:2586771-2586842:-1:exon
so has part: feature:2584506-2584748:-1:exon
so has part: feature:2579035-2579219:-1:exon
so has part: feature:2576356-2576551:-1:exon
so has part: feature:2575988-2576145:-1:exon
so has part: feature:2572016-2574683:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2658427-2658461:-1:exon

position:2658427:-1
position: 2658427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2641738-2641840:-1:exon

position:2641738:-1
position: 2641738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2641840:-1
position: 2641840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2641437-2641577:-1:exon

position:2641437:-1
position: 2641437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2641577:-1
position: 2641577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2633712-2633793:-1:exon

position:2633712:-1
position: 2633712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2633793:-1
position: 2633793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2617782-2617930:-1:exon

position:2617782:-1
position: 2617782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2617930:-1
position: 2617930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2614058-2614171:-1:exon

position:2614058:-1
position: 2614058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2614171:-1
position: 2614171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2610794-2610831:-1:exon

position:2610794:-1
position: 2610794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2610831:-1
position: 2610831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2608462-2608603:-1:exon

position:2608462:-1
position: 2608462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2608603:-1
position: 2608603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2600291-2600427:-1:exon

position:2600291:-1
position: 2600291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2600427:-1
position: 2600427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2596056-2596278:-1:exon

position:2596056:-1
position: 2596056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2596278:-1
position: 2596278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2594517-2594631:-1:exon

position:2594517:-1
position: 2594517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2594631:-1
position: 2594631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2590134-2590271:-1:exon

position:2590134:-1
position: 2590134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2590271:-1
position: 2590271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2589721-2589813:-1:exon

position:2589721:-1
position: 2589721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2589813:-1
position: 2589813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2586771-2586842:-1:exon

position:2586771:-1
position: 2586771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2586842:-1
position: 2586842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2584506-2584748:-1:exon

position:2584506:-1
position: 2584506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2584748:-1
position: 2584748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2579035-2579219:-1:exon

position:2579035:-1
position: 2579035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2579219:-1
position: 2579219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2576356-2576551:-1:exon

position:2576356:-1
position: 2576356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2576551:-1
position: 2576551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2575988-2576145:-1:exon

position:2575988:-1
position: 2575988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2576145:-1
position: 2576145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2572016-2574683:-1:exon

position:2574683:-1
position: 2574683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PLA2G4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: PLA2G4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytosolic phospholipase A2
translation: MSVIDPYQHIVVEHQYSHIFTVTVRKATNVTKGAIGDMLDTPDPYVELFIPSAPDCRKRTKHFNNDVNPVWNETFEFILDPNQENVLEVTLMDANYVMDETLGTSTFPISSLKLGEKKEVQLTFNDVTEMTLELSLEVCSSTDLRFSMALCDEEKKFRQQRKDNIMHSMKSFLGEENSKNLTTSRDVPVIAILGSGGGFRAMVGFAGVMKALYESGILDCAAYIAGLSGSTWYMSTLYSHPDFPEKGPKEINQELMNSVSHNPLLLLTPQKVKRYIEALWNKKSSGQPVTFTDIFGMLIGETLIHNRMDTTLSNMKEKINNAQCALPLFTCLHVKPDVSELMFADWVEFSPYEIGMAKYGTFMSPDLFGSKFFMGTVVKKYSENPLHFLMGVWGSAFSILFNRVLGVSNSQNKGPTMEEELENIRLKHLVSNDSSDSEDESHHPKGTENAEANQEYQNSSQESWVQRMLMALVGDSTLFNTREGRAGKVHNFMLGLNLNSCYPLSPLADLLTQESVEEDELDAAVADPDEFERIYEPLDVKSKKIHIVDSGLTFNLPYPLILRPQRGVDLIISFDFSARPSDSSPPFKEILLAEKWAKMNKLPFPKIDPNVFDREGMKECYVFKPKDTSSEKDCPTIIHFVLANINFRKYKAPGVPRETQEEKDFADFDIFDDPNTPFSTFNFQYPNEAFKRLHDLMEFNTLNNIDVIKQAMIESIEYRKENPSRCSVSLSSVEARRFFNKNNLNNNHT
SIO_010081: PLA2G4A
subclass of: SO_0000673
so part of: PLA2G4A
location: complement(join(2574552..2574683,2575988..2576145,2576356..2576551,2579035..2579219,2584506..2584748,2586771..2586842,2589721..2589813,2590134..2590271,2594517..2594631,2596056..2596278,2600291..2600427,2608462..2608603,2610794..2610831,2614058..2614171,2617782..2617930,2633712..2633793,2641437..2641469))
location: region:2574552-2641469:-1
so has part: feature:2641437-2641469:-1:exon
so has part: feature:2633712-2633793:-1:exon
so has part: feature:2617782-2617930:-1:exon
so has part: feature:2614058-2614171:-1:exon
so has part: feature:2610794-2610831:-1:exon
so has part: feature:2608462-2608603:-1:exon
so has part: feature:2600291-2600427:-1:exon
so has part: feature:2596056-2596278:-1:exon
so has part: feature:2594517-2594631:-1:exon
so has part: feature:2590134-2590271:-1:exon
so has part: feature:2589721-2589813:-1:exon
so has part: feature:2586771-2586842:-1:exon
so has part: feature:2584506-2584748:-1:exon
so has part: feature:2579035-2579219:-1:exon
so has part: feature:2576356-2576551:-1:exon
so has part: feature:2575988-2576145:-1:exon
so has part: feature:2574552-2574683:-1:exon

XP_050757280.1
type: Protein
SIO_000068: ncbiprotein

position:2574552:-1
position: 2574552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2641469:-1
position: 2641469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2641437-2641469:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2633712-2633793:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2617782-2617930:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2614058-2614171:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2610794-2610831:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2608462-2608603:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2600291-2600427:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2596056-2596278:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2594517-2594631:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2590134-2590271:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2589721-2589813:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2586771-2586842:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2584506-2584748:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2579035-2579219:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2576356-2576551:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2575988-2576145:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2574552-2574683:-1:exon

PTGS2
type: Gene
subclass of: SO_0000704
RO_0002162: 33616
gene: PTGS2
note: prostaglandin-endoperoxide synthase 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2696517..2704648
location: region:2696517-2704648:1
so has part: feature:2696517-2704648:1:exon
subclass of: SO_0000010

127019322
type: Gene
SIO_000068: ncbigene

position:2696517:1
position: 2696517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2704648:1
position: 2704648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2696517-2704648:1:exon

PTGS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: PTGS2
product: prostaglandin-endoperoxide synthase 2, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_050901319.1
SIO_010081: PTGS2
subclass of: SO_0000673
so part of: PTGS2
location: join(2696517..2696539,2697311..2697427,2697539..2697682,2698134..2698277,2698661..2698842,2699681..2699764,2699951..2700197,2701184..2701470,2701633..2701780,2701941..2704648)
location: region:2696517-2704648:1
so has part: feature:2696517-2696539:1:exon
so has part: feature:2697311-2697427:1:exon
so has part: feature:2697539-2697682:1:exon
so has part: feature:2698134-2698277:1:exon
so has part: feature:2698661-2698842:1:exon
so has part: feature:2699681-2699764:1:exon
so has part: feature:2699951-2700197:1:exon
so has part: feature:2701184-2701470:1:exon
so has part: feature:2701633-2701780:1:exon
so has part: feature:2701941-2704648:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2696517-2696539:1:exon

position:2696539:1
position: 2696539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2697311-2697427:1:exon

position:2697311:1
position: 2697311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2697427:1
position: 2697427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2697539-2697682:1:exon

position:2697539:1
position: 2697539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2697682:1
position: 2697682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2698134-2698277:1:exon

position:2698134:1
position: 2698134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2698277:1
position: 2698277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2698661-2698842:1:exon

position:2698661:1
position: 2698661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2698842:1
position: 2698842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2699681-2699764:1:exon

position:2699681:1
position: 2699681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2699764:1
position: 2699764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2699951-2700197:1:exon

position:2699951:1
position: 2699951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2700197:1
position: 2700197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2701184-2701470:1:exon

position:2701184:1
position: 2701184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2701470:1
position: 2701470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2701633-2701780:1:exon

position:2701633:1
position: 2701633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2701780:1
position: 2701780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2701941-2704648:1:exon

position:2701941:1
position: 2701941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PTGS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: PTGS2
product: prostaglandin-endoperoxide synthase 2, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_050901318.1
SIO_010081: PTGS2
subclass of: SO_0000673
so part of: PTGS2
location: join(2696771..2696834,2697311..2697427,2697539..2697682,2698134..2698277,2698661..2698842,2699681..2699764,2699951..2700197,2701184..2701470,2701633..2701780,2701941..2704648)
location: region:2696771-2704648:1
so has part: feature:2696771-2696834:1:exon
so has part: feature:2697311-2697427:1:exon
so has part: feature:2697539-2697682:1:exon
so has part: feature:2698134-2698277:1:exon
so has part: feature:2698661-2698842:1:exon
so has part: feature:2699681-2699764:1:exon
so has part: feature:2699951-2700197:1:exon
so has part: feature:2701184-2701470:1:exon
so has part: feature:2701633-2701780:1:exon
so has part: feature:2701941-2704648:1:exon

position:2696771:1
position: 2696771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2696771-2696834:1:exon

position:2696834:1
position: 2696834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2697311-2697427:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2697539-2697682:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2698134-2698277:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2698661-2698842:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2699681-2699764:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2699951-2700197:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2701184-2701470:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2701633-2701780:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2701941-2704648:1:exon

PTGS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: PTGS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prostaglandin G/H synthase 2 isoform X1
translation: MILPCALVATLLAALLAAGHAANPCCSNPCQNRGVCMTTGFDQYECDCTRTGYYGENCTTPEFFTWLRLTLKPSPNTVHYILTHFKGAWNIINNIPFLRDAIMRYVLMSRSHLIDSPPTYNSDYSYKSWEAYSNLSYYTRSLPPVGLDCPTPMGVKGKKELPDSKLIVEKFLLRKKFIPDPQGTNVMFTFFAQHFTHQFFKTDHKKGPGFTKALGHGVDLNHIYGETLERQLKLRLLKDGKLKYQMIDGEMYPPTVKDTQAEMIYPPHVPEHLQFSVGQEVFGLVPGLMMYATIWLREHNRVCDILKQEHPEWDDEQLFQTTRLILIGETIKIVIEDYVQHLSGYHFKLKFDPELLFNQRFQYQNRIAAEFNTLYHWHPLLPDTFQIHDQEYTFQQFLYNNSIMLEHGLSHMVKSFSKQSAGRVAGGKNVPAAVQKVAKASIDQSRQMRYQSLNEYRKRFMLKPFKSFEELTGEKEMAAELEELYGDIDAMELYPGLLVEKPRPGAIFGETMVEIGAPFSLKGLMGNAICSPEYWKPSTFGGKVGFEIINTASLQKLICNNVKGCPFTAFHILNPEPTEATINVSTSKTAMEDINPTLLLKERSAEL
SIO_010081: PTGS2
subclass of: SO_0000673
so part of: PTGS2
location: join(2696771..2696834,2697311..2697427,2697539..2697682,2698134..2698277,2698661..2698842,2699681..2699764,2699951..2700197,2701184..2701470,2701633..2701780,2701941..2702347)
location: region:2696771-2702347:1
so has part: feature:2696771-2696834:1:exon
so has part: feature:2697311-2697427:1:exon
so has part: feature:2697539-2697682:1:exon
so has part: feature:2698134-2698277:1:exon
so has part: feature:2698661-2698842:1:exon
so has part: feature:2699681-2699764:1:exon
so has part: feature:2699951-2700197:1:exon
so has part: feature:2701184-2701470:1:exon
so has part: feature:2701633-2701780:1:exon
so has part: feature:2701941-2702347:1:exon

XP_050757275.1
type: Protein
SIO_000068: ncbiprotein

position:2702347:1
position: 2702347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2696771-2696834:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2697311-2697427:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2697539-2697682:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2698134-2698277:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2698661-2698842:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2699681-2699764:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2699951-2700197:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2701184-2701470:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2701633-2701780:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2701941-2702347:1:exon

PTGS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: PTGS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prostaglandin G/H synthase 2 isoform X2
translation: MTTGFDQYECDCTRTGYYGENCTTPEFFTWLRLTLKPSPNTVHYILTHFKGAWNIINNIPFLRDAIMRYVLMSRSHLIDSPPTYNSDYSYKSWEAYSNLSYYTRSLPPVGLDCPTPMGVKGKKELPDSKLIVEKFLLRKKFIPDPQGTNVMFTFFAQHFTHQFFKTDHKKGPGFTKALGHGVDLNHIYGETLERQLKLRLLKDGKLKYQMIDGEMYPPTVKDTQAEMIYPPHVPEHLQFSVGQEVFGLVPGLMMYATIWLREHNRVCDILKQEHPEWDDEQLFQTTRLILIGETIKIVIEDYVQHLSGYHFKLKFDPELLFNQRFQYQNRIAAEFNTLYHWHPLLPDTFQIHDQEYTFQQFLYNNSIMLEHGLSHMVKSFSKQSAGRVAGGKNVPAAVQKVAKASIDQSRQMRYQSLNEYRKRFMLKPFKSFEELTGEKEMAAELEELYGDIDAMELYPGLLVEKPRPGAIFGETMVEIGAPFSLKGLMGNAICSPEYWKPSTFGGKVGFEIINTASLQKLICNNVKGCPFTAFHILNPEPTEATINVSTSKTAMEDINPTLLLKERSAEL
SIO_010081: PTGS2
subclass of: SO_0000673
so part of: PTGS2
location: join(2697355..2697427,2697539..2697682,2698134..2698277,2698661..2698842,2699681..2699764,2699951..2700197,2701184..2701470,2701633..2701780,2701941..2702347)
location: region:2697355-2702347:1
so has part: feature:2697355-2697427:1:exon
so has part: feature:2697539-2697682:1:exon
so has part: feature:2698134-2698277:1:exon
so has part: feature:2698661-2698842:1:exon
so has part: feature:2699681-2699764:1:exon
so has part: feature:2699951-2700197:1:exon
so has part: feature:2701184-2701470:1:exon
so has part: feature:2701633-2701780:1:exon
so has part: feature:2701941-2702347:1:exon

XP_050757276.1
type: Protein
SIO_000068: ncbiprotein

position:2697355:1
position: 2697355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2697355-2697427:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2697539-2697682:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2698134-2698277:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2698661-2698842:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2699681-2699764:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2699951-2700197:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2701184-2701470:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2701633-2701780:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2701941-2702347:1:exon

PDC
type: Gene
subclass of: SO_0000704
RO_0002162: 33616
gene: PDC
note: phosducin; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2798887..2802077
location: region:2798887-2802077:1
so has part: feature:2798887-2802077:1:exon
subclass of: SO_0000010

127019157
type: Gene
SIO_000068: ncbigene

position:2798887:1
position: 2798887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2802077:1
position: 2802077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2798887-2802077:1:exon

PDC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: PDC
product: phosducin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins
transcript id: XM_050901092.1
SIO_010081: PDC
subclass of: SO_0000673
so part of: PDC
location: join(2798887..2798947,2800712..2800872,2801550..2802077)
location: region:2798887-2802077:1
so has part: feature:2798887-2798947:1:exon
so has part: feature:2800712-2800872:1:exon
so has part: feature:2801550-2802077:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2798887-2798947:1:exon

position:2798947:1
position: 2798947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2800712-2800872:1:exon

position:2800712:1
position: 2800712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2800872:1
position: 2800872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2801550-2802077:1:exon

position:2801550:1
position: 2801550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PDC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: PDC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosducin
translation: MEENANTSFEEDFEGQATHTGPKGVINDWRKFKLESEDRGSLSLSKKEILRQMSSPHRSFSKDDKDTRERFCRKMSMQEYELIHDEQEDESCLQKYRKRCMQDMHQRLSFGPKYGYLCELQNGEQFLEAIEKEHKTTTVIVHIYEDGIKGCDALNNSLTCLAAEYATVKFCKIKASNTGAGDRFSNEVLPTLLVYKGGELLSNFISVSEQFNEEFFAVDVESFLNEYGLLPERELPALGNGNMDEQDVE
SIO_010081: PDC
subclass of: SO_0000673
so part of: PDC
location: join(2798887..2798947,2800712..2800872,2801550..2802077)
location: region:2798887-2802077:1
so has part: feature:2798887-2798947:1:exon
so has part: feature:2800712-2800872:1:exon
so has part: feature:2801550-2802077:1:exon

XP_050757049.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2798887-2798947:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2800712-2800872:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2801550-2802077:1:exon

ODR4
type: Gene
subclass of: SO_0000704
RO_0002162: 33616
gene: ODR4
note: odr-4 GPCR localization factor homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2807573..2824923)
location: region:2807573-2824923:-1
so has part: feature:2807573-2824923:-1:exon
subclass of: SO_0000010

127019156
type: Gene
SIO_000068: ncbigene

position:2807573:-1
position: 2807573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2824923:-1
position: 2824923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2807573-2824923:-1:exon

ODR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: ODR4
product: odr-4 GPCR localization factor homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
transcript id: XM_050901091.1
SIO_010081: ODR4
subclass of: SO_0000673
so part of: ODR4
location: complement(join(2807573..2808773,2809997..2810089,2815271..2815456,2817089..2817179,2817861..2817989,2819332..2819397,2819926..2820021,2820655..2820795,2820923..2820959,2821693..2821799,2822944..2823039,2823425..2823556,2823995..2824129,2824873..2824923))
location: region:2807573-2824923:-1
so has part: feature:2824873-2824923:-1:exon
so has part: feature:2823995-2824129:-1:exon
so has part: feature:2823425-2823556:-1:exon
so has part: feature:2822944-2823039:-1:exon
so has part: feature:2821693-2821799:-1:exon
so has part: feature:2820923-2820959:-1:exon
so has part: feature:2820655-2820795:-1:exon
so has part: feature:2819926-2820021:-1:exon
so has part: feature:2819332-2819397:-1:exon
so has part: feature:2817861-2817989:-1:exon
so has part: feature:2817089-2817179:-1:exon
so has part: feature:2815271-2815456:-1:exon
so has part: feature:2809997-2810089:-1:exon
so has part: feature:2807573-2808773:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2824873-2824923:-1:exon

position:2824873:-1
position: 2824873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2823995-2824129:-1:exon

position:2823995:-1
position: 2823995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2824129:-1
position: 2824129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2823425-2823556:-1:exon

position:2823425:-1
position: 2823425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2823556:-1
position: 2823556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2822944-2823039:-1:exon

position:2822944:-1
position: 2822944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2823039:-1
position: 2823039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2821693-2821799:-1:exon

position:2821693:-1
position: 2821693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2821799:-1
position: 2821799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2820923-2820959:-1:exon

position:2820923:-1
position: 2820923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2820959:-1
position: 2820959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2820655-2820795:-1:exon

position:2820655:-1
position: 2820655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2820795:-1
position: 2820795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2819926-2820021:-1:exon

position:2819926:-1
position: 2819926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2820021:-1
position: 2820021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2819332-2819397:-1:exon

position:2819332:-1
position: 2819332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2819397:-1
position: 2819397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2817861-2817989:-1:exon

position:2817861:-1
position: 2817861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2817989:-1
position: 2817989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2817089-2817179:-1:exon

position:2817089:-1
position: 2817089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2817179:-1
position: 2817179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2815271-2815456:-1:exon

position:2815271:-1
position: 2815271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2815456:-1
position: 2815456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2809997-2810089:-1:exon

position:2809997:-1
position: 2809997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2810089:-1
position: 2810089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2807573-2808773:-1:exon

position:2808773:-1
position: 2808773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ODR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: ODR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein odr-4 homolog
translation: MGRTYFVEEAVGQYLSDLSTKLKPYVTGLLIGQCSLQRDYIIRAVRTPPKEEQKEDNISPSKLASIDDEWITTHASQVSRMLPGGLLVLGVFIIATPELSKDSQNALRKLIFSVEKSLTKRRLWKPAEEEVSDRAALQMCSATKKVVCRTYDVQDPKSSAKPADWKYQSALSASWLALDCTVNVNIHIPLLATSPNHDLEKNTKNGLNRWSKQIEDSVFLINGHVKDDDTELLEGQKKLRGNTQSSTQFSDVKVLAQLSQGSSHRSTATVQVCSGSINLKGAVKCRAYVHNNKPKVKEAIQALKRDIINTLSDRCEILFEDLIINEGPHKKNFEREYHVLPQRLFVPVAGSSVMLSDYKFGDEATGEIQERFVEMLDQSVEAEDIHVAEEINTVDICPVTDNMDDTQQKQLTKATLLLKLQQNMGVVIAAAVAVFASIFSFNYFSD
SIO_010081: ODR4
subclass of: SO_0000673
so part of: ODR4
location: complement(join(2808706..2808773,2809997..2810089,2815271..2815456,2817089..2817179,2817861..2817989,2819332..2819397,2819926..2820021,2820655..2820795,2820923..2820959,2821693..2821799,2822944..2823039,2823425..2823556,2823995..2824093))
location: region:2808706-2824093:-1
so has part: feature:2823995-2824093:-1:exon
so has part: feature:2823425-2823556:-1:exon
so has part: feature:2822944-2823039:-1:exon
so has part: feature:2821693-2821799:-1:exon
so has part: feature:2820923-2820959:-1:exon
so has part: feature:2820655-2820795:-1:exon
so has part: feature:2819926-2820021:-1:exon
so has part: feature:2819332-2819397:-1:exon
so has part: feature:2817861-2817989:-1:exon
so has part: feature:2817089-2817179:-1:exon
so has part: feature:2815271-2815456:-1:exon
so has part: feature:2809997-2810089:-1:exon
so has part: feature:2808706-2808773:-1:exon

XP_050757048.1
type: Protein
SIO_000068: ncbiprotein

position:2808706:-1
position: 2808706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2824093:-1
position: 2824093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2823995-2824093:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2823425-2823556:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2822944-2823039:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2821693-2821799:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2820923-2820959:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2820655-2820795:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2819926-2820021:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2819332-2819397:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2817861-2817989:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2817089-2817179:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2815271-2815456:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2809997-2810089:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2808706-2808773:-1:exon

TPR
type: Gene
subclass of: SO_0000704
RO_0002162: 33616
gene: TPR
note: translocated promoter region, nuclear basket protein; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2825573..2867851
location: region:2825573-2867851:1
so has part: feature:2825573-2867851:1:exon
subclass of: SO_0000010

127018993
type: Gene
SIO_000068: ncbigene

position:2825573:1
position: 2825573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2867851:1
position: 2867851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2825573-2867851:1:exon

TPR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: TPR
product: translocated promoter region, nuclear basket protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
transcript id: XM_050900846.1
SIO_010081: TPR
subclass of: SO_0000673
so part of: TPR
location: join(2825573..2825723,2827336..2827440,2827923..2827996,2829369..2829465,2829838..2829941,2830623..2830787,2831525..2831617,2831740..2831820,2833278..2833365,2833889..2834029,2835029..2835120,2835968..2836165,2836700..2836807,2837345..2837571,2838265..2838428,2838823..2838962,2839048..2839196,2839497..2839659,2840094..2840228,2841014..2841154,2841324..2841492,2842012..2842178,2843167..2843319,2844044..2844160,2845237..2845440,2845530..2845714,2846161..2846308,2846704..2846841,2847560..2847691,2847964..2848094,2848468..2848678,2849016..2849162,2849586..2849784,2850496..2850701,2851454..2851515,2852431..2852639,2852951..2853223,2854034..2854182,2855050..2855133,2856951..2857151,2858523..2858654,2859189..2859279,2859749..2859933,2860772..2860840,2862011..2862105,2862805..2862911,2863699..2863794,2864000..2864156,2865717..2865835,2866386..2866484,2867464..2867851)
location: region:2825573-2867851:1
so has part: feature:2825573-2825723:1:exon
so has part: feature:2827336-2827440:1:exon
so has part: feature:2827923-2827996:1:exon
so has part: feature:2829369-2829465:1:exon
so has part: feature:2829838-2829941:1:exon
so has part: feature:2830623-2830787:1:exon
so has part: feature:2831525-2831617:1:exon
so has part: feature:2831740-2831820:1:exon
so has part: feature:2833278-2833365:1:exon
so has part: feature:2833889-2834029:1:exon
so has part: feature:2835029-2835120:1:exon
so has part: feature:2835968-2836165:1:exon
so has part: feature:2836700-2836807:1:exon
so has part: feature:2837345-2837571:1:exon
so has part: feature:2838265-2838428:1:exon
so has part: feature:2838823-2838962:1:exon
so has part: feature:2839048-2839196:1:exon
so has part: feature:2839497-2839659:1:exon
so has part: feature:2840094-2840228:1:exon
so has part: feature:2841014-2841154:1:exon
so has part: feature:2841324-2841492:1:exon
so has part: feature:2842012-2842178:1:exon
so has part: feature:2843167-2843319:1:exon
so has part: feature:2844044-2844160:1:exon
so has part: feature:2845237-2845440:1:exon
so has part: feature:2845530-2845714:1:exon
so has part: feature:2846161-2846308:1:exon
so has part: feature:2846704-2846841:1:exon
so has part: feature:2847560-2847691:1:exon
so has part: feature:2847964-2848094:1:exon
so has part: feature:2848468-2848678:1:exon
so has part: feature:2849016-2849162:1:exon
so has part: feature:2849586-2849784:1:exon
so has part: feature:2850496-2850701:1:exon
so has part: feature:2851454-2851515:1:exon
so has part: feature:2852431-2852639:1:exon
so has part: feature:2852951-2853223:1:exon
so has part: feature:2854034-2854182:1:exon
so has part: feature:2855050-2855133:1:exon
so has part: feature:2856951-2857151:1:exon
so has part: feature:2858523-2858654:1:exon
so has part: feature:2859189-2859279:1:exon
so has part: feature:2859749-2859933:1:exon
so has part: feature:2860772-2860840:1:exon
so has part: feature:2862011-2862105:1:exon
so has part: feature:2862805-2862911:1:exon
so has part: feature:2863699-2863794:1:exon
so has part: feature:2864000-2864156:1:exon
so has part: feature:2865717-2865835:1:exon
so has part: feature:2866386-2866484:1:exon
so has part: feature:2867464-2867851:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2825573-2825723:1:exon

position:2825723:1
position: 2825723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2827336-2827440:1:exon

position:2827336:1
position: 2827336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2827440:1
position: 2827440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2827923-2827996:1:exon

position:2827923:1
position: 2827923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2827996:1
position: 2827996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2829369-2829465:1:exon

position:2829369:1
position: 2829369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2829465:1
position: 2829465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2829838-2829941:1:exon

position:2829838:1
position: 2829838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2829941:1
position: 2829941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2830623-2830787:1:exon

position:2830623:1
position: 2830623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2830787:1
position: 2830787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2831525-2831617:1:exon

position:2831525:1
position: 2831525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2831617:1
position: 2831617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2831740-2831820:1:exon

position:2831740:1
position: 2831740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2831820:1
position: 2831820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2833278-2833365:1:exon

position:2833278:1
position: 2833278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2833365:1
position: 2833365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2833889-2834029:1:exon

position:2833889:1
position: 2833889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2834029:1
position: 2834029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2835029-2835120:1:exon

position:2835029:1
position: 2835029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2835120:1
position: 2835120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2835968-2836165:1:exon

position:2835968:1
position: 2835968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2836165:1
position: 2836165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2836700-2836807:1:exon

position:2836700:1
position: 2836700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2836807:1
position: 2836807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2837345-2837571:1:exon

position:2837345:1
position: 2837345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2837571:1
position: 2837571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2838265-2838428:1:exon

position:2838265:1
position: 2838265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2838428:1
position: 2838428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2838823-2838962:1:exon

position:2838823:1
position: 2838823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2838962:1
position: 2838962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2839048-2839196:1:exon

position:2839048:1
position: 2839048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2839196:1
position: 2839196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2839497-2839659:1:exon

position:2839497:1
position: 2839497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2839659:1
position: 2839659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2840094-2840228:1:exon

position:2840094:1
position: 2840094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2840228:1
position: 2840228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2841014-2841154:1:exon

position:2841014:1
position: 2841014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2841154:1
position: 2841154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2841324-2841492:1:exon

position:2841324:1
position: 2841324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2841492:1
position: 2841492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2842012-2842178:1:exon

position:2842012:1
position: 2842012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2842178:1
position: 2842178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2843167-2843319:1:exon

position:2843167:1
position: 2843167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2843319:1
position: 2843319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2844044-2844160:1:exon

position:2844044:1
position: 2844044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2844160:1
position: 2844160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2845237-2845440:1:exon

position:2845237:1
position: 2845237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2845440:1
position: 2845440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2845530-2845714:1:exon

position:2845530:1
position: 2845530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2845714:1
position: 2845714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2846161-2846308:1:exon

position:2846161:1
position: 2846161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2846308:1
position: 2846308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2846704-2846841:1:exon

position:2846704:1
position: 2846704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2846841:1
position: 2846841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2847560-2847691:1:exon

position:2847560:1
position: 2847560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2847691:1
position: 2847691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:2847964-2848094:1:exon

position:2847964:1
position: 2847964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2848094:1
position: 2848094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:2848468-2848678:1:exon

position:2848468:1
position: 2848468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2848678:1
position: 2848678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:2849016-2849162:1:exon

position:2849016:1
position: 2849016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2849162:1
position: 2849162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:2849586-2849784:1:exon

position:2849586:1
position: 2849586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2849784:1
position: 2849784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:2850496-2850701:1:exon

position:2850496:1
position: 2850496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2850701:1
position: 2850701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:2851454-2851515:1:exon

position:2851454:1
position: 2851454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2851515:1
position: 2851515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:2852431-2852639:1:exon

position:2852431:1
position: 2852431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2852639:1
position: 2852639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:2852951-2853223:1:exon

position:2852951:1
position: 2852951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2853223:1
position: 2853223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:2854034-2854182:1:exon

position:2854034:1
position: 2854034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2854182:1
position: 2854182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:2855050-2855133:1:exon

position:2855050:1
position: 2855050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2855133:1
position: 2855133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:2856951-2857151:1:exon

position:2856951:1
position: 2856951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2857151:1
position: 2857151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:2858523-2858654:1:exon

position:2858523:1
position: 2858523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2858654:1
position: 2858654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:2859189-2859279:1:exon

position:2859189:1
position: 2859189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2859279:1
position: 2859279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:2859749-2859933:1:exon

position:2859749:1
position: 2859749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2859933:1
position: 2859933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:2860772-2860840:1:exon

position:2860772:1
position: 2860772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2860840:1
position: 2860840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:2862011-2862105:1:exon

position:2862011:1
position: 2862011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2862105:1
position: 2862105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:2862805-2862911:1:exon

position:2862805:1
position: 2862805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2862911:1
position: 2862911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:2863699-2863794:1:exon

position:2863699:1
position: 2863699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2863794:1
position: 2863794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:2864000-2864156:1:exon

position:2864000:1
position: 2864000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2864156:1
position: 2864156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:2865717-2865835:1:exon

position:2865717:1
position: 2865717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2865835:1
position: 2865835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 50
SIO_000628: feature:2866386-2866484:1:exon

position:2866386:1
position: 2866386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2866484:1
position: 2866484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 51
SIO_000628: feature:2867464-2867851:1:exon

position:2867464:1
position: 2867464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TPR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: TPR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleoprotein TPR
translation: MAAVLQQVLERAELSKLPKPVQGKLERFLADQQSEIDGLRARHERFKVDSEQQYFEVEKRLAQSQERLVNETQECQTLREELKKLHEQLKSLNEKNKELEAAQDRNATIQSHLSREKEELEAEKRDLVRTSERRSQEVEHLNEDVKRLNEKLTEANTEKVKLQLKLDELQTSDVSMKYREKRLEQEKELLQNQNTWLNAELKAKTDELLHTAREKGNEILELKCNLENKKEEVSRMEEQVNSLKQSNENLQKHVEDLLNKLKEAKEQQASMEERFHNELNAHIKLSNLYKSAADDSEAKSNELTGAVEELHKLLKEAGEANKATQEHLAEVEESKAVMEKELREKISKLEKELENANDLLSATKRKGAILSEEELAAMSPTAAAVAKVVKPGMKLTELYNAYVETQDQLLLEKLENKRINKYLDEIVQEVEAKAPILKRQREEFERSQKAVASLSAKLEQAMKEIQRLQEDADKANKHASLLERENQRLEVQVKDLSQQIRVLLMELEEARGNHVIRDEEVSSADISSSSEVISQHLVSYRNIEELQQQNQRLLVALRELGEAREKEEQETTSSKISELQSQLEEALNELEKLRESRHHQLQLVESIVRQRDMFRILLAQTTGAIIPLQASGILPEEISLTSTPKRPNLPQAMSTPAQVSMTESVEAVEAKAALKQLQEVFENYKKEKAENDKLLNEQNEKLQEQVTDLRSQNAKISTQLEFASKRYEMLQDNVEGYRREITSLHERTQKLTATTQKQEQIINTMTQDLRGANEKLAVAEVRAENLKKEKDILKMSDVRLTQQRESLLVEQRGQNLLLTNLRTIQGILERSETETKQRLNNQIEKLEREISQLKKKLESEVEQRHSLTKNQEVHILDLKRQLETETNRHINTKELLKNAQKETAMLKQQLNNTEAQLASQSSQRAPGKGQPSTNEDVDDLVSRLRQADEQVNDLRERLKTSSSNVEQYRAMVLSLEESLNKEKQVTEEVRATVEARLKESSEYQAQLEKKLMESEKEKQELQEEKRKAVESMEQQLSELKKSLSTVQSEVQEALQRASTALNNEQQARRDCQEQAKMASEAQNKYERELMLHAADVEALQAIKDQVAKNTAVRQQLEEAAQKAESELLECKASWEERERMIKDEASKLASRCEDLEKQNRLLHEQLESLSDKMVTSMKEAMPTAVNVSLNEEGKSQEQILEILRFIRREKEIAETRFEVAQVESLRYRQRVEHLERELQELQDSLNAEREKVQVTAKTIAQHEELMKKTETMNVLIETNKMLREEKERLEQELQQIQAKVRKLEADILPLQESNAELSEKSGMLQAEKKLLEEDVKRWKARTQHLLSQQKDTDLEEYRKLLSEKEANTKRIQQMSEETGRLKAEIARTNASLTTSQNLVQSLKDEVTKIRTEKDTLQKELDAKVADIQEKVKTITQVKKIGRRYKTQYEELKAQHDKMVAEASTQSFVEQQEEQVSVQEVQELKDTLSQAEVKTKALETQVESLQKTIAEKETEVRNLQEQITQLQSELARFHQDLQEKTTQEEQLRQQITEKEEKTRKTLLAAKQKIAQLAGTKEQLTKENEEWKQKSSSLEEQKTELEVRMSALKSQYEGRICRLERELREQQERHHEQRDEPPESTNKVPEQQRQISLKSTPASGERGIASTSDPPTANIKPTPVVSTPSKVTAAAIAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVETQEAMQSEGPVEHVPVFGSTSGSVRSTSPNVQTSLSQPILTVQQQTQATAFVQPTQQSHPQIEPANQEPSPTIVEVVQSSQIERPSTSTAVFGTVSATPSSSLSKRPREEEEDNTVENSDQISEETVDVPLPKKLRSIQRVGPEEEVTAEESTDGEVEAQTYNQDSQDSIGEGVTQGEYTPMEDSEETSQSIPIDLGPLQSDQQNTSSSQDGQSKRDDVIVIDSDDEDDDDEENEGEQEDYEDEEEEDEDDDEDTGMGDEGDDSNEGTGSAD…
SIO_010081: TPR
subclass of: SO_0000673
so part of: TPR
location: join(2825573..2825723,2827336..2827440,2827923..2827996,2829369..2829465,2829838..2829941,2830623..2830787,2831525..2831617,2831740..2831820,2833278..2833365,2833889..2834029,2835029..2835120,2835968..2836165,2836700..2836807,2837345..2837571,2838265..2838428,2838823..2838962,2839048..2839196,2839497..2839659,2840094..2840228,2841014..2841154,2841324..2841492,2842012..2842178,2843167..2843319,2844044..2844160,2845237..2845440,2845530..2845714,2846161..2846308,2846704..2846841,2847560..2847691,2847964..2848094,2848468..2848678,2849016..2849162,2849586..2849784,2850496..2850701,2851454..2851515,2852431..2852639,2852951..2853223,2854034..2854182,2855050..2855133,2856951..2857151,2858523..2858654,2859189..2859279,2859749..2859933,2860772..2860840,2862011..2862105,2862805..2862911,2863699..2863794,2864000..2864156,2865717..2865835,2866386..2866484,2867464..2867519)
location: region:2825573-2867519:1
so has part: feature:2825573-2825723:1:exon
so has part: feature:2827336-2827440:1:exon
so has part: feature:2827923-2827996:1:exon
so has part: feature:2829369-2829465:1:exon
so has part: feature:2829838-2829941:1:exon
so has part: feature:2830623-2830787:1:exon
so has part: feature:2831525-2831617:1:exon
so has part: feature:2831740-2831820:1:exon
so has part: feature:2833278-2833365:1:exon
so has part: feature:2833889-2834029:1:exon
so has part: feature:2835029-2835120:1:exon
so has part: feature:2835968-2836165:1:exon
so has part: feature:2836700-2836807:1:exon
so has part: feature:2837345-2837571:1:exon
so has part: feature:2838265-2838428:1:exon
so has part: feature:2838823-2838962:1:exon
so has part: feature:2839048-2839196:1:exon
so has part: feature:2839497-2839659:1:exon
so has part: feature:2840094-2840228:1:exon
so has part: feature:2841014-2841154:1:exon
so has part: feature:2841324-2841492:1:exon
so has part: feature:2842012-2842178:1:exon
so has part: feature:2843167-2843319:1:exon
so has part: feature:2844044-2844160:1:exon
so has part: feature:2845237-2845440:1:exon
so has part: feature:2845530-2845714:1:exon
so has part: feature:2846161-2846308:1:exon
so has part: feature:2846704-2846841:1:exon
so has part: feature:2847560-2847691:1:exon
so has part: feature:2847964-2848094:1:exon
so has part: feature:2848468-2848678:1:exon
so has part: feature:2849016-2849162:1:exon
so has part: feature:2849586-2849784:1:exon
so has part: feature:2850496-2850701:1:exon
so has part: feature:2851454-2851515:1:exon
so has part: feature:2852431-2852639:1:exon
so has part: feature:2852951-2853223:1:exon
so has part: feature:2854034-2854182:1:exon
so has part: feature:2855050-2855133:1:exon
so has part: feature:2856951-2857151:1:exon
so has part: feature:2858523-2858654:1:exon
so has part: feature:2859189-2859279:1:exon
so has part: feature:2859749-2859933:1:exon
so has part: feature:2860772-2860840:1:exon
so has part: feature:2862011-2862105:1:exon
so has part: feature:2862805-2862911:1:exon
so has part: feature:2863699-2863794:1:exon
so has part: feature:2864000-2864156:1:exon
so has part: feature:2865717-2865835:1:exon
so has part: feature:2866386-2866484:1:exon
so has part: feature:2867464-2867519:1:exon

XP_050756803.1
type: Protein
SIO_000068: ncbiprotein

position:2867519:1
position: 2867519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2825573-2825723:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2827336-2827440:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2827923-2827996:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2829369-2829465:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2829838-2829941:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2830623-2830787:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2831525-2831617:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2831740-2831820:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2833278-2833365:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2833889-2834029:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2835029-2835120:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2835968-2836165:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2836700-2836807:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2837345-2837571:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2838265-2838428:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2838823-2838962:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2839048-2839196:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2839497-2839659:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2840094-2840228:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2841014-2841154:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2841324-2841492:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2842012-2842178:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2843167-2843319:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2844044-2844160:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2845237-2845440:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2845530-2845714:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2846161-2846308:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2846704-2846841:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2847560-2847691:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2847964-2848094:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2848468-2848678:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2849016-2849162:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2849586-2849784:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2850496-2850701:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2851454-2851515:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2852431-2852639:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2852951-2853223:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2854034-2854182:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2855050-2855133:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2856951-2857151:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2858523-2858654:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2859189-2859279:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2859749-2859933:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2860772-2860840:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2862011-2862105:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:2862805-2862911:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:2863699-2863794:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:2864000-2864156:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:2865717-2865835:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:2866386-2866484:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:2867464-2867519:1:exon

PRG4
type: Gene
subclass of: SO_0000704
RO_0002162: 33616
gene: PRG4
note: proteoglycan 4; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2867698..2885374)
location: region:2867698-2885374:-1
so has part: feature:2867698-2885374:-1:exon
subclass of: SO_0000010

127019042
type: Gene
SIO_000068: ncbigene

position:2867698:-1
position: 2867698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2885374:-1
position: 2885374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2867698-2885374:-1:exon

PRG4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: PRG4
product: proteoglycan 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_050900952.1
SIO_010081: PRG4
subclass of: SO_0000673
so part of: PRG4
location: complement(join(2867698..2867820,2868827..2868952,2869161..2869340,2870213..2870369,2871230..2871369,2871681..2871767,2872873..2873393,2873514..2873773,2874014..2877309,2879399..2879518,2881144..2881263,2882776..2882898,2885281..2885374))
location: region:2867698-2885374:-1
so has part: feature:2885281-2885374:-1:exon
so has part: feature:2882776-2882898:-1:exon
so has part: feature:2881144-2881263:-1:exon
so has part: feature:2879399-2879518:-1:exon
so has part: feature:2874014-2877309:-1:exon
so has part: feature:2873514-2873773:-1:exon
so has part: feature:2872873-2873393:-1:exon
so has part: feature:2871681-2871767:-1:exon
so has part: feature:2871230-2871369:-1:exon
so has part: feature:2870213-2870369:-1:exon
so has part: feature:2869161-2869340:-1:exon
so has part: feature:2868827-2868952:-1:exon
so has part: feature:2867698-2867820:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2885281-2885374:-1:exon

position:2885281:-1
position: 2885281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2882776-2882898:-1:exon

position:2882776:-1
position: 2882776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2882898:-1
position: 2882898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2881144-2881263:-1:exon

position:2881144:-1
position: 2881144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2881263:-1
position: 2881263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2879399-2879518:-1:exon

position:2879399:-1
position: 2879399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2879518:-1
position: 2879518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2874014-2877309:-1:exon

position:2874014:-1
position: 2874014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2877309:-1
position: 2877309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2873514-2873773:-1:exon

position:2873514:-1
position: 2873514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2873773:-1
position: 2873773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2872873-2873393:-1:exon

position:2872873:-1
position: 2872873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2873393:-1
position: 2873393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2871681-2871767:-1:exon

position:2871681:-1
position: 2871681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2871767:-1
position: 2871767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2871230-2871369:-1:exon

position:2871230:-1
position: 2871230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2871369:-1
position: 2871369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2870213-2870369:-1:exon

position:2870213:-1
position: 2870213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2870369:-1
position: 2870369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2869161-2869340:-1:exon

position:2869161:-1
position: 2869161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2869340:-1
position: 2869340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2868827-2868952:-1:exon

position:2868827:-1
position: 2868827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2868952:-1
position: 2868952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2867698-2867820:-1:exon

position:2867820:-1
position: 2867820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PRG4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: PRG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteoglycan 4
translation: MSYLKVMIIWNILCVSLVILSLSLFQEVSSEDLSSCTGRCGEGYSREHDCHCDFNCQHYMECCPDFKKVCTVAVSCRGRCFEAFERGRECDCDADCERYGKCCPDYTEHCKEAHTEKPSPKTTPENKPTSKRSSKNEEKKPEEVTQPHEVMEATTTTETTTAQKDTPATTAASTTKADSSTTPKVEDMTPEATEEPITEADSPMTPKGEETTPEATEAPTTKADSPTTPKPEDTTPEATEAPTTKADSPTTPKPEDTTPEATEAPTTKADSPTTPKPEDTTPEATEAPTTKADSPTTPKPEDTTPEATEAPTTKADSPTTPKVEDTTPEATEELMTEADSPTTPKPEDTTPEATEAPTTKADSPTTPKPEDTTPEATEAPLTEADSPTTPKPEDTTPEATEAPTTKADSPTTPKVEDETPEATEELMTEADSPTTPKPEDTTPEATEAPTTKADSPTTPKPEDTTPEATEAPTTKADSPTTPKPEDTTPEATEAPTTKADSPTTPKPEDTTPEATEAPTTKADSPTTPKPEDTTPEATEAPLTEADSPTTPKPEDTTPEATEAPTTKADSPTTPKVEDETPEATEELMTEADSPTTPKPEDTTPEATEAPTTKADSPTTPKPEDTTPEATEAPTTKADSPTTPKPEDTTPEATEAPTTKADSPTTPKPEDTTPEAPTTKADSPTTPKPEDTTPEAPTTKADSPTTPKVEDETPEATEELMTKADSPMTPKPEDTTPEATEAPTTKADLPTTPKPEDTTPEATEELMTEADSPTTPKPEDTTPEATEAPTTKADSPTTPKVEDETPEATEELMTKADSPMTPKPEDTTPEATEAPATKADSPTTPKPEDTTPEATEAPTTKADSPTTPKPEDTTPEATEAPTTKADSPTTPKSEDTTPEATEAPTTKADSPTTPKPEDTTPEATEAPTTKADSPTTPKPEDTTPEAPTTKADSPTTPKPEDTTPEAPTTKADSPTTPKPEDTTPEAPTTKADSPTTPKPEDTTPEAPTTKADSPTTPKPEDTTPEATEAPTTKADSPTTPKPEDTTPEAPTTKADSPTTPKPEDTTPEAAEAPTTKADSPTTPKPEDTTPEAPTTKADSPTTPKPEDTTPEATEAPTTKADSPTTPKPEDTTPEATEAPTTKADSPTTPKPEDTTPQTTEAPTTKADSPTTPKPEDTTPEAPTTKADSPTTPKVEEAEADSPKPPEVKGTTPAATEADTTAIQKTTPIEVTTTVPGLVTTAKKGTTTESSEATTPKIKTTTMNKEITTPKKDKTTVLKDILTSRRDTTTVTTVITAKPDDSPKGKDNIPNTTPTAKQAVTTAAESEATTADKKTATTAATTPLPKPTVLATTAKTDSTPKPREIVTTNKRDTTTETKQTVTAAAKKSTSATCVVVETTTAGKKEVTTIKETSLTPEKEMEDAPEKAPSIDKGVETTVTKETATRDKKDTIEEMFIVSKGTSKPTIHFQEVTDTRDEPHPANPETLPVQEEPQINNKPLIQTADLPILTGETQARKDEKDLCSGKPADGMVALPNGTLAVFRGHYYWLLNGRSPPATSPRRISDGWGIPSPIDAVFSRCNCDGKTFFIKGPLYWRFTNDVMDKGYPKPLANGFAGLSGKIVATLPIARYKTRPESVYFIKKDGNMQQYVYRQEPAKKCQRRTQVTVRYPAYVPRLVIRRRFQRAVRMPTVIKTVRFNPYPSGVLRKEIKMTTYWRGLPKVIHSTISLPNYNKPDGYDYYAFSYNRYYSLDVGKRIARPVTALTGKTVSKDWYNCPSK
SIO_010081: PRG4
subclass of: SO_0000673
so part of: PRG4
location: complement(join(2867717..2867820,2868827..2868952,2869161..2869340,2870213..2870369,2871230..2871369,2871681..2871767,2872873..2873393,2873514..2873773,2874014..2877309,2879399..2879518,2881144..2881263,2882776..2882898,2885281..2885374))
location: region:2867717-2885374:-1
so has part: feature:2885281-2885374:-1:exon
so has part: feature:2882776-2882898:-1:exon
so has part: feature:2881144-2881263:-1:exon
so has part: feature:2879399-2879518:-1:exon
so has part: feature:2874014-2877309:-1:exon
so has part: feature:2873514-2873773:-1:exon
so has part: feature:2872873-2873393:-1:exon
so has part: feature:2871681-2871767:-1:exon
so has part: feature:2871230-2871369:-1:exon
so has part: feature:2870213-2870369:-1:exon
so has part: feature:2869161-2869340:-1:exon
so has part: feature:2868827-2868952:-1:exon
so has part: feature:2867717-2867820:-1:exon

XP_050756909.1
type: Protein
SIO_000068: ncbiprotein

position:2867717:-1
position: 2867717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2885281-2885374:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2882776-2882898:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2881144-2881263:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2879399-2879518:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2874014-2877309:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2873514-2873773:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2872873-2873393:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2871681-2871767:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2871230-2871369:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2870213-2870369:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2869161-2869340:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2868827-2868952:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2867717-2867820:-1:exon

HMCN1
type: Gene
subclass of: SO_0000704
RO_0002162: 33616
gene: HMCN1
note: hemicentin 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2911096..3112335)
location: region:2911096-3112335:-1
so has part: feature:2911096-3112335:-1:exon
subclass of: SO_0000010

127019044
type: Gene
SIO_000068: ncbigene

position:2911096:-1
position: 2911096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3112335:-1
position: 3112335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2911096-3112335:-1:exon

HMCN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: HMCN1
product: hemicentin 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 5 bases in 5 codons
transcript id: XM_050900953.1
SIO_010081: HMCN1
subclass of: SO_0000673
so part of: HMCN1
location: complement(join(2911096..2912519,2913642..2913768,2914452..2914571,2917410..2917759,2921873..2922001,2922807..2922932,2923267..2923379,2923760..2923894,2924145..2924264,2925764..2925826,2927506..2927743,2929278..2929399,2929726..2929863,2930196..2930345,2930807..2930977,2933044..2933214,2933813..2933983,2935245..2935415,2936484..2936654,2936864..2937034,2937547..2937816,2938630..2938711,2939451..2939641,2940123..2940257,2940839..2941052,2941428..2941618,2941980..2942249,2942524..2942658,2942826..2942963,2943470..2943577,2943801..2943965,2944169..2944290,2944469..2944625,2945038..2945165,2946056..2946200,2947250..2947391,2950528..2950664,2951463..2951544,2952700..2952890,2953477..2953755,2954153..2954250,2954417..2954600,2956128..2956252,2956844..2957003,2958421..2958570,2958794..2958925,2959056..2959137,2959358..2959560,2959694..2959807,2960891..2961052,2964147..2964243,2964761..2964948,2965898..2966010,2967060..2967263,2967998..2968148,2970095..2970240,2971627..2971740,2972954..2973127,2973854..2974044,2974460..2974546,2978124..2978237,2981853..2982020,2983309..2983590,2984341..2984502,2986291..2986413,2988471..2988567,2988879..2989054,2993094..2993217,2994001..2994152,2996626..2996802,2999002..2999103,3000445..3000568,3001359..3001513,3001753..3001922,3002351..3002459,3003536..3003817,3004435..3004713,3007409..3007563,3008593..3008719,3009216..3009362,3010040..3010170,3011245..3011439,3011858..3011953,3013044..3013316,3015167..3015294,3017779..3017953,3018780..3018939,3019577..3019689,3021243..3021387,3023400..3023527,3025014..3025112,3026070..3026264,3027015..3027173,3028396..3028509,3029235..3029362,3029788..3029929,3041872..3042147,3047065..3047186,3051935..3052079,3052344..3052607,3053180..3053300,3058606..3058712,3060288..3060459,3073865..3073987,3074560..3074718,3078857..3078927,3112050..3112335))
location: region:2911096-3112335:-1
so has part: feature:3112050-3112335:-1:exon
so has part: feature:3078857-3078927:-1:exon
so has part: feature:3074560-3074718:-1:exon
so has part: feature:3073865-3073987:-1:exon
so has part: feature:3060288-3060459:-1:exon
so has part: feature:3058606-3058712:-1:exon
so has part: feature:3053180-3053300:-1:exon
so has part: feature:3052344-3052607:-1:exon
so has part: feature:3051935-3052079:-1:exon
so has part: feature:3047065-3047186:-1:exon
so has part: feature:3041872-3042147:-1:exon
so has part: feature:3029788-3029929:-1:exon
so has part: feature:3029235-3029362:-1:exon
so has part: feature:3028396-3028509:-1:exon
so has part: feature:3027015-3027173:-1:exon
so has part: feature:3026070-3026264:-1:exon
so has part: feature:3025014-3025112:-1:exon
so has part: feature:3023400-3023527:-1:exon
so has part: feature:3021243-3021387:-1:exon
so has part: feature:3019577-3019689:-1:exon
so has part: feature:3018780-3018939:-1:exon
so has part: feature:3017779-3017953:-1:exon
so has part: feature:3015167-3015294:-1:exon
so has part: feature:3013044-3013316:-1:exon
so has part: feature:3011858-3011953:-1:exon
so has part: feature:3011245-3011439:-1:exon
so has part: feature:3010040-3010170:-1:exon
so has part: feature:3009216-3009362:-1:exon
so has part: feature:3008593-3008719:-1:exon
so has part: feature:3007409-3007563:-1:exon
so has part: feature:3004435-3004713:-1:exon
so has part: feature:3003536-3003817:-1:exon
so has part: feature:3002351-3002459:-1:exon
so has part: feature:3001753-3001922:-1:exon
so has part: feature:3001359-3001513:-1:exon
so has part: feature:3000445-3000568:-1:exon
so has part: feature:2999002-2999103:-1:exon
so has part: feature:2996626-2996802:-1:exon
so has part: feature:2994001-2994152:-1:exon
so has part: feature:2993094-2993217:-1:exon
so has part: feature:2988879-2989054:-1:exon
so has part: feature:2988471-2988567:-1:exon
so has part: feature:2986291-2986413:-1:exon
so has part: feature:2984341-2984502:-1:exon
so has part: feature:2983309-2983590:-1:exon
so has part: feature:2981853-2982020:-1:exon
so has part: feature:2978124-2978237:-1:exon
so has part: feature:2974460-2974546:-1:exon
so has part: feature:2973854-2974044:-1:exon
so has part: feature:2972954-2973127:-1:exon
so has part: feature:2971627-2971740:-1:exon
so has part: feature:2970095-2970240:-1:exon
so has part: feature:2967998-2968148:-1:exon
so has part: feature:2967060-2967263:-1:exon
so has part: feature:2965898-2966010:-1:exon
so has part: feature:2964761-2964948:-1:exon
so has part: feature:2964147-2964243:-1:exon
so has part: feature:2960891-2961052:-1:exon
so has part: feature:2959694-2959807:-1:exon
so has part: feature:2959358-2959560:-1:exon
so has part: feature:2959056-2959137:-1:exon
so has part: feature:2958794-2958925:-1:exon
so has part: feature:2958421-2958570:-1:exon
so has part: feature:2956844-2957003:-1:exon
so has part: feature:2956128-2956252:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3112050-3112335:-1:exon

position:3112050:-1
position: 3112050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3078857-3078927:-1:exon

position:3078857:-1
position: 3078857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3078927:-1
position: 3078927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3074560-3074718:-1:exon

position:3074560:-1
position: 3074560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3074718:-1
position: 3074718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3073865-3073987:-1:exon

position:3073865:-1
position: 3073865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3073987:-1
position: 3073987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3060288-3060459:-1:exon

position:3060288:-1
position: 3060288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3060459:-1
position: 3060459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3058606-3058712:-1:exon

position:3058606:-1
position: 3058606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3058712:-1
position: 3058712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3053180-3053300:-1:exon

position:3053180:-1
position: 3053180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3053300:-1
position: 3053300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3052344-3052607:-1:exon

position:3052344:-1
position: 3052344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3052607:-1
position: 3052607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3051935-3052079:-1:exon

position:3051935:-1
position: 3051935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3052079:-1
position: 3052079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3047065-3047186:-1:exon

position:3047065:-1
position: 3047065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3047186:-1
position: 3047186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3041872-3042147:-1:exon

position:3041872:-1
position: 3041872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3042147:-1
position: 3042147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3029788-3029929:-1:exon

position:3029788:-1
position: 3029788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3029929:-1
position: 3029929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3029235-3029362:-1:exon

position:3029235:-1
position: 3029235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3029362:-1
position: 3029362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3028396-3028509:-1:exon

position:3028396:-1
position: 3028396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3028509:-1
position: 3028509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3027015-3027173:-1:exon

position:3027015:-1
position: 3027015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3027173:-1
position: 3027173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3026070-3026264:-1:exon

position:3026070:-1
position: 3026070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3026264:-1
position: 3026264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3025014-3025112:-1:exon

position:3025014:-1
position: 3025014
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position: 2930807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2930977:-1
position: 2930977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 94
SIO_000628: feature:2930196-2930345:-1:exon

position:2930196:-1
position: 2930196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2930345:-1
position: 2930345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 95
SIO_000628: feature:2929726-2929863:-1:exon

position:2929726:-1
position: 2929726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2929863:-1
position: 2929863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 96
SIO_000628: feature:2929278-2929399:-1:exon

position:2929278:-1
position: 2929278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2929399:-1
position: 2929399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 97
SIO_000628: feature:2927506-2927743:-1:exon

position:2927506:-1
position: 2927506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2927743:-1
position: 2927743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 98
SIO_000628: feature:2925764-2925826:-1:exon

position:2925764:-1
position: 2925764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2925826:-1
position: 2925826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 99
SIO_000628: feature:2924145-2924264:-1:exon

position:2924145:-1
position: 2924145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2924264:-1
position: 2924264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 100
SIO_000628: feature:2923760-2923894:-1:exon

position:2923760:-1
position: 2923760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2923894:-1
position: 2923894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 101
SIO_000628: feature:2923267-2923379:-1:exon

position:2923267:-1
position: 2923267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2923379:-1
position: 2923379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 102
SIO_000628: feature:2922807-2922932:-1:exon

position:2922807:-1
position: 2922807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2922932:-1
position: 2922932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 103
SIO_000628: feature:2921873-2922001:-1:exon

position:2921873:-1
position: 2921873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2922001:-1
position: 2922001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 104
SIO_000628: feature:2917410-2917759:-1:exon

position:2917410:-1
position: 2917410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2917759:-1
position: 2917759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 105
SIO_000628: feature:2914452-2914571:-1:exon

position:2914452:-1
position: 2914452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2914571:-1
position: 2914571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 106
SIO_000628: feature:2913642-2913768:-1:exon

position:2913642:-1
position: 2913642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2913768:-1
position: 2913768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 107
SIO_000628: feature:2911096-2912519:-1:exon

position:2912519:-1
position: 2912519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HMCN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: HMCN1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 5 bases in 5 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: hemicentin-1
translation: MAFRGGSGAWGAGLGAVLLLALCRRAAPEPGAEGEPGGEAVPEGASTLAFVFDVTGSMYDDLVQVIEGASKILETSLKRPKRPLYNFALVPFHDPEIGPVTITTDPKKFQFELRELYVQGGGDCPEMSIGAIKIALEISLPGSFIYVFTDARSKDYRLTHEVLQLIQQKQSQVVFVLTGDCDDRDHIGYKVYEEIASTSSGQVFHLDKKQVNEVLKWVEEAVQASKVHLLSTDHLTMAVNTWQIPFDPSLKEVTVSLSGPSPAIEIHDPLGKQISKGSGLNELLNIHNSAKVVNVKDPEPGTWTIKTSSSGRHSVRITGLSTIDFRAGFSRKPTLDFKKTSSRPVQGIPTFVLLNTTGIFLPARVDRLELLSITGELLKTLPVKYYPDRKPYGLWNISDFIPPDEAFFVKIMGYDKDDYLFQRVSSVSFSSITPAAPKVTMPMKTPGYYLQPGSVPCHVESLIPFTQRFTKNGVKLGVDQFFRESSSMSWEIAKVSLPDEGFYECMATSSAGTGRAQTFLDVSEPPPMIQVPNNVTAVPGEGAILTCLTLSTVRYNLTWQRNGRDVRLKEPLRIRMMSNLSLEVKTVKLTDAGKYNCIASNEGGSTTASVFLTVQEPPRVVISPKNQTFTAGSEVSIRCSSTGYPKPTVVWTHNDMFIIGSSRYRLTPEGTLIIRKATPKDAGIYGCLASNSAGTEKQTSTLTYIEGPTLTIVQSEILIALGDTTVMECKTTGIPPPQVKWFKGDLELRASAFLIIDTHRGLLKIQETQDLDAGDYTCVATNDAGRASGKITLDVGSPPVFTQEPSDESADIGSNITLPCYVQGYPEPKVKWRRLNGASLFSRPFAVSSITQLRTGALSINNLWVSDEGTYICEAENQFGRIQSQPATITVTGLVTPLIGVSPATANVIEGQQLTLPCVLLAGNPVPDRRWIKNSMVLVPNPYINVRSDGSLHLERVRLQDGGDYTCMASNVAGTSNKTTTVNVYVLPVIQHGQQIFSTIEGIPVTLPCKASGVPKPSIVWSKKGEVILSSNVKFSAGSDGSLYVVSPGGEETGEYVCTATNAAGYATRKVQLTVYVKPRVSRPGDQQGNAYDKPIEISVIAGEDVTLPCEVKSLPPPIITWAKETQLISPFSPRHTFLPSGSMKISETQVSDSGMYICVATNIAGNVTQSVKLSVHVPPKIQRGPRVLKVQAGHRVDIPCSAQGSPPPTITWFKGRSAVPIDGGQFIRSLDGALGISNVQLPDAGIYKCVASNVAGNDASEITVQVQESPTIEDLDPPYNSPFQERVANQRIAFPCPAKGIPKPVIKWLRNGRELTGSEPGISILEDGMLLIIASVTPSDNGEYICVATNEAGSTERKYNLKVNVPPEIRDQEKVTNTSVVVHHPVSLFCEVSGNPFPIISWYKEDIQVVESSTLQILHNGKILKLLKAATDDAGQYSCKAINVXGSSEKLFNLDILVPPSIIGADTPGEIAVILNQEISLECRAKGFPFPDIHWFKDGKPLFLGDPNVELLDKDQVLHIKNARRIDKGRYQCSATNTAGKQVKEVKLIIHVPPSIKGGNITTEVSALLNNLINLECETKGIPVPTITWYKDGRPIISSPQALYVDRGQFLQIPRAQVSDSAKYTCRVTNAAGAAEKIYDMDVYVPPVIEGDADTAKNRQVVAGNSLTLECKAAGNPPPLLTWLKDGVPVKASDNLRVVSGGKKLEILNAVEADRGQYLCVATSIAGEQEIKYEVEILVPPFVEGGDELLDCIVILHSPLELDCSATGTPSPTITWLKDGQPVEEGAGRKILLSGQKLLISRAQVSDTGRYKCVAANKAGEHEREFDVIVHVPPTIKSAGTSERAVVIYKPVTLQCIANGIPSPSITWLKDGQPVNTARGNIRLESSGRILQVVKALLEDAGRYTCVATNAAGEAQQHVRLHVHEPPSLEDAGKMLNETVVVNNPIHLECRASGNPLPAITWYKDNRPLTGAASATFLNRGQVLQIEGAQISDAGIYKC…
SIO_010081: HMCN1
subclass of: SO_0000673
so part of: HMCN1
location: complement(join(2912153..2912519,2913642..2913768,2914452..2914571,2917410..2917759,2921873..2922001,2922807..2922932,2923267..2923379,2923760..2923894,2924145..2924264,2925764..2925826,2927506..2927743,2929278..2929399,2929726..2929863,2930196..2930345,2930807..2930977,2933044..2933214,2933813..2933983,2935245..2935415,2936484..2936654,2936864..2937034,2937547..2937816,2938630..2938711,2939451..2939641,2940123..2940257,2940839..2941052,2941428..2941618,2941980..2942249,2942524..2942658,2942826..2942963,2943470..2943577,2943801..2943965,2944169..2944290,2944469..2944625,2945038..2945165,2946056..2946200,2947250..2947391,2950528..2950664,2951463..2951544,2952700..2952890,2953477..2953755,2954153..2954250,2954417..2954600,2956128..2956252,2956844..2957003,2958421..2958570,2958794..2958925,2959056..2959137,2959358..2959560,2959694..2959807,2960891..2961052,2964147..2964243,2964761..2964948,2965898..2966010,2967060..2967263,2967998..2968148,2970095..2970240,2971627..2971740,2972954..2973127,2973854..2974044,2974460..2974546,2978124..2978237,2981853..2982020,2983309..2983590,2984341..2984502,2986291..2986413,2988471..2988567,2988879..2989054,2993094..2993217,2994001..2994152,2996626..2996802,2999002..2999103,3000445..3000568,3001359..3001513,3001753..3001922,3002351..3002459,3003536..3003817,3004435..3004713,3007409..3007563,3008593..3008719,3009216..3009362,3010040..3010170,3011245..3011439,3011858..3011953,3013044..3013316,3015167..3015294,3017779..3017953,3018780..3018939,3019577..3019689,3021243..3021387,3023400..3023527,3025014..3025112,3026070..3026264,3027015..3027173,3028396..3028509,3029235..3029362,3029788..3029929,3041872..3042147,3047065..3047186,3051935..3052079,3052344..3052607,3053180..3053300,3058606..3058712,3060288..3060459,3073865..3073987,3074560..3074718,3078857..3078927,3112050..3112335))
location: region:2912153-3112335:-1
so has part: feature:3112050-3112335:-1:exon
so has part: feature:3078857-3078927:-1:exon
so has part: feature:3074560-3074718:-1:exon
so has part: feature:3073865-3073987:-1:exon
so has part: feature:3060288-3060459:-1:exon
so has part: feature:3058606-3058712:-1:exon
so has part: feature:3053180-3053300:-1:exon
so has part: feature:3052344-3052607:-1:exon
so has part: feature:3051935-3052079:-1:exon
so has part: feature:3047065-3047186:-1:exon
so has part: feature:3041872-3042147:-1:exon
so has part: feature:3029788-3029929:-1:exon
so has part: feature:3029235-3029362:-1:exon
so has part: feature:3028396-3028509:-1:exon
so has part: feature:3027015-3027173:-1:exon
so has part: feature:3026070-3026264:-1:exon
so has part: feature:3025014-3025112:-1:exon
so has part: feature:3023400-3023527:-1:exon
so has part: feature:3021243-3021387:-1:exon
so has part: feature:3019577-3019689:-1:exon
so has part: feature:3018780-3018939:-1:exon
so has part: feature:3017779-3017953:-1:exon
so has part: feature:3015167-3015294:-1:exon
so has part: feature:3013044-3013316:-1:exon
so has part: feature:3011858-3011953:-1:exon
so has part: feature:3011245-3011439:-1:exon
so has part: feature:3010040-3010170:-1:exon
so has part: feature:3009216-3009362:-1:exon
so has part: feature:3008593-3008719:-1:exon
so has part: feature:3007409-3007563:-1:exon
so has part: feature:3004435-3004713:-1:exon
so has part: feature:3003536-3003817:-1:exon
so has part: feature:3002351-3002459:-1:exon
so has part: feature:3001753-3001922:-1:exon
so has part: feature:3001359-3001513:-1:exon
so has part: feature:3000445-3000568:-1:exon
so has part: feature:2999002-2999103:-1:exon
so has part: feature:2996626-2996802:-1:exon
so has part: feature:2994001-2994152:-1:exon
so has part: feature:2993094-2993217:-1:exon
so has part: feature:2988879-2989054:-1:exon
so has part: feature:2988471-2988567:-1:exon
so has part: feature:2986291-2986413:-1:exon
so has part: feature:2984341-2984502:-1:exon
so has part: feature:2983309-2983590:-1:exon
so has part: feature:2981853-2982020:-1:exon
so has part: feature:2978124-2978237:-1:exon
so has part: feature:2974460-2974546:-1:exon
so has part: feature:2973854-2974044:-1:exon
so has part: feature:2972954-2973127:-1:exon
so has part: feature:2971627-2971740:-1:exon
so has part: feature:2970095-2970240:-1:exon
so has part: feature:2967998-2968148:-1:exon
so has part: feature:2967060-2967263:-1:exon
so has part: feature:2965898-2966010:-1:exon
so has part: feature:2964761-2964948:-1:exon
so has part: feature:2964147-2964243:-1:exon
so has part: feature:2960891-2961052:-1:exon
so has part: feature:2959694-2959807:-1:exon
so has part: feature:2959358-2959560:-1:exon
so has part: feature:2959056-2959137:-1:exon
so has part: feature:2958794-2958925:-1:exon
so has part: feature:2958421-2958570:-1:exon
so has part: feature:2956844-2957003:-1:exon
so has part: feature:2956128-2956252:-1:exon

XP_050756910.1
type: Protein
SIO_000068: ncbiprotein

position:2912153:-1
position: 2912153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3112050-3112335:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3078857-3078927:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3074560-3074718:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3073865-3073987:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3060288-3060459:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3058606-3058712:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3053180-3053300:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3052344-3052607:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3051935-3052079:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3047065-3047186:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3041872-3042147:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3029788-3029929:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3029235-3029362:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3028396-3028509:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3027015-3027173:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3026070-3026264:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3025014-3025112:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3023400-3023527:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3021243-3021387:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3019577-3019689:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3018780-3018939:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3017779-3017953:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3015167-3015294:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3013044-3013316:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3011858-3011953:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3011245-3011439:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3010040-3010170:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3009216-3009362:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3008593-3008719:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:3007409-3007563:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:3004435-3004713:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:3003536-3003817:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:3002351-3002459:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:3001753-3001922:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:3001359-3001513:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:3000445-3000568:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2999002-2999103:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2996626-2996802:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2994001-2994152:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2993094-2993217:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2988879-2989054:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2988471-2988567:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2986291-2986413:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2984341-2984502:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2983309-2983590:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:2981853-2982020:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:2978124-2978237:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:2974460-2974546:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:2973854-2974044:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:2972954-2973127:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:2971627-2971740:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:2970095-2970240:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:2967998-2968148:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:2967060-2967263:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:2965898-2966010:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:2964761-2964948:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:2964147-2964243:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:2960891-2961052:-1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:2959694-2959807:-1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:2959358-2959560:-1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:2959056-2959137:-1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:2958794-2958925:-1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:2958421-2958570:-1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:2956844-2957003:-1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:2956128-2956252:-1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:2954417-2954600:-1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:2954153-2954250:-1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:2953477-2953755:-1:exon

urn:…
SIO_000300: 69
SIO_000628: feature:2952700-2952890:-1:exon

urn:…
SIO_000300: 70
SIO_000628: feature:2951463-2951544:-1:exon

urn:…
SIO_000300: 71
SIO_000628: feature:2950528-2950664:-1:exon

urn:…
SIO_000300: 72
SIO_000628: feature:2947250-2947391:-1:exon

urn:…
SIO_000300: 73
SIO_000628: feature:2946056-2946200:-1:exon

urn:…
SIO_000300: 74
SIO_000628: feature:2945038-2945165:-1:exon

urn:…
SIO_000300: 75
SIO_000628: feature:2944469-2944625:-1:exon

urn:…
SIO_000300: 76
SIO_000628: feature:2944169-2944290:-1:exon

urn:…
SIO_000300: 77
SIO_000628: feature:2943801-2943965:-1:exon

urn:…
SIO_000300: 78
SIO_000628: feature:2943470-2943577:-1:exon

urn:…
SIO_000300: 79
SIO_000628: feature:2942826-2942963:-1:exon

urn:…
SIO_000300: 80
SIO_000628: feature:2942524-2942658:-1:exon

urn:…
SIO_000300: 81
SIO_000628: feature:2941980-2942249:-1:exon

urn:…
SIO_000300: 82
SIO_000628: feature:2941428-2941618:-1:exon

urn:…
SIO_000300: 83
SIO_000628: feature:2940839-2941052:-1:exon

urn:…
SIO_000300: 84
SIO_000628: feature:2940123-2940257:-1:exon

urn:…
SIO_000300: 85
SIO_000628: feature:2939451-2939641:-1:exon

urn:…
SIO_000300: 86
SIO_000628: feature:2938630-2938711:-1:exon

urn:…
SIO_000300: 87
SIO_000628: feature:2937547-2937816:-1:exon

urn:…
SIO_000300: 88
SIO_000628: feature:2936864-2937034:-1:exon

urn:…
SIO_000300: 89
SIO_000628: feature:2936484-2936654:-1:exon

urn:…
SIO_000300: 90
SIO_000628: feature:2935245-2935415:-1:exon

urn:…
SIO_000300: 91
SIO_000628: feature:2933813-2933983:-1:exon

urn:…
SIO_000300: 92
SIO_000628: feature:2933044-2933214:-1:exon

urn:…
SIO_000300: 93
SIO_000628: feature:2930807-2930977:-1:exon

urn:…
SIO_000300: 94
SIO_000628: feature:2930196-2930345:-1:exon

urn:…
SIO_000300: 95
SIO_000628: feature:2929726-2929863:-1:exon

urn:…
SIO_000300: 96
SIO_000628: feature:2929278-2929399:-1:exon

urn:…
SIO_000300: 97
SIO_000628: feature:2927506-2927743:-1:exon

urn:…
SIO_000300: 98
SIO_000628: feature:2925764-2925826:-1:exon

urn:…
SIO_000300: 99
SIO_000628: feature:2924145-2924264:-1:exon

urn:…
SIO_000300: 100
SIO_000628: feature:2923760-2923894:-1:exon

urn:…
SIO_000300: 101
SIO_000628: feature:2923267-2923379:-1:exon

urn:…
SIO_000300: 102
SIO_000628: feature:2922807-2922932:-1:exon

urn:…
SIO_000300: 103
SIO_000628: feature:2921873-2922001:-1:exon

urn:…
SIO_000300: 104
SIO_000628: feature:2917410-2917759:-1:exon

urn:…
SIO_000300: 105
SIO_000628: feature:2914452-2914571:-1:exon

urn:…
SIO_000300: 106
SIO_000628: feature:2913642-2913768:-1:exon

urn:…
SIO_000300: 107
SIO_000628: feature:2912153-2912519:-1:exon

IVNS1ABP
type: Gene
subclass of: SO_0000704
RO_0002162: 33616
gene: IVNS1ABP
note: influenza virus NS1A binding protein; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3236653..3248091
location: region:3236653-3248091:1
so has part: feature:3236653-3248091:1:exon
subclass of: SO_0000010

127018884
type: Gene
SIO_000068: ncbigene

position:3236653:1
position: 3236653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3248091:1
position: 3248091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3236653-3248091:1:exon

IVNS1ABP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: IVNS1ABP
product: influenza virus NS1A binding protein
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_050900672.1
SIO_010081: IVNS1ABP
subclass of: SO_0000673
so part of: IVNS1ABP
location: join(3236653..3236812,3238165..3238291,3238632..3238801,3238888..3238963,3239739..3239912,3240310..3240435,3241821..3241928,3244065..3244191,3244752..3244976,3245139..3245260,3245444..3245570,3245659..3245790,3245956..3246129,3246633..3248091)
location: region:3236653-3248091:1
so has part: feature:3236653-3236812:1:exon
so has part: feature:3238165-3238291:1:exon
so has part: feature:3238632-3238801:1:exon
so has part: feature:3238888-3238963:1:exon
so has part: feature:3239739-3239912:1:exon
so has part: feature:3240310-3240435:1:exon
so has part: feature:3241821-3241928:1:exon
so has part: feature:3244065-3244191:1:exon
so has part: feature:3244752-3244976:1:exon
so has part: feature:3245139-3245260:1:exon
so has part: feature:3245444-3245570:1:exon
so has part: feature:3245659-3245790:1:exon
so has part: feature:3245956-3246129:1:exon
so has part: feature:3246633-3248091:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3236653-3236812:1:exon

position:3236812:1
position: 3236812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3238165-3238291:1:exon

position:3238165:1
position: 3238165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3238291:1
position: 3238291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3238632-3238801:1:exon

position:3238632:1
position: 3238632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3238801:1
position: 3238801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3238888-3238963:1:exon

position:3238888:1
position: 3238888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3238963:1
position: 3238963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3239739-3239912:1:exon

position:3239739:1
position: 3239739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3239912:1
position: 3239912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3240310-3240435:1:exon

position:3240310:1
position: 3240310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3240435:1
position: 3240435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3241821-3241928:1:exon

position:3241821:1
position: 3241821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3241928:1
position: 3241928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3244065-3244191:1:exon

position:3244065:1
position: 3244065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3244191:1
position: 3244191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3244752-3244976:1:exon

position:3244752:1
position: 3244752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3244976:1
position: 3244976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3245139-3245260:1:exon

position:3245139:1
position: 3245139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3245260:1
position: 3245260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3245444-3245570:1:exon

position:3245444:1
position: 3245444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3245570:1
position: 3245570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3245659-3245790:1:exon

position:3245659:1
position: 3245659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3245790:1
position: 3245790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3245956-3246129:1:exon

position:3245956:1
position: 3245956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3246129:1
position: 3246129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3246633-3248091:1:exon

position:3246633:1
position: 3246633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IVNS1ABP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: IVNS1ABP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: influenza virus NS1A-binding protein
translation: MIPNGYLMFEDENFIESSVAKLNALRKSGQFCDVRLQVCGHEMLAHRAVLACCSPYLFEIFNSDSDSHGISHVKFDDLNPEAVEVLLNYAYTAQLKADKELVKDVYSAAKKLKMERVKQVCGDYLLSKMDVQSCISYRNFASCMGDLRLLNKIDGYIQEHLLQISEQEEFLKLPRLKLEVMLEDNVGLPSNGKLYTKVINWVQRSIWENGDSLEDLMEEVQTLYYSADHKLLDGNLLDGQAEVYGSDDDHIQFVQKKPPRENDHKQISSSSSGSLSPNAAVQSPKHEWKIIASEKTSSNTYLCLAVLDGVLCVIFLHGRNSPQSSPTSTPRLLKSLSFELQPNDLIEKPMSPMQYARSGLGTAELNGKLIAAGGYNREECLRTVECYDPQKDTWTFIAPMRTPRARFQMAVLMGQLYVVGGSNGHSDDLSCGEMYEPEIDDWTPVPELRTNRCNAGVCALNGKLYIVGGSDPYGQKGLKNCDVFDPVTKSWTSCAPLNIRRHQSAVCELGGFLYIIGGAESWNCLNSVERYNPENNTWTLIAPMNVARRGAGVAVHDGKLFVGGGFDGSHAVSCVEMYDPAKNEWKMMGSMTTPRSNAGITTVANTIYAVGGFDGNEFLNTVEVYNPESNEWSPYTKIYKF
SIO_010081: IVNS1ABP
subclass of: SO_0000673
so part of: IVNS1ABP
location: join(3238181..3238291,3238632..3238801,3238888..3238963,3239739..3239912,3240310..3240435,3241821..3241928,3244065..3244191,3244752..3244976,3245139..3245260,3245444..3245570,3245659..3245790,3245956..3246129,3246633..3246886)
location: region:3238181-3246886:1
so has part: feature:3238181-3238291:1:exon
so has part: feature:3238632-3238801:1:exon
so has part: feature:3238888-3238963:1:exon
so has part: feature:3239739-3239912:1:exon
so has part: feature:3240310-3240435:1:exon
so has part: feature:3241821-3241928:1:exon
so has part: feature:3244065-3244191:1:exon
so has part: feature:3244752-3244976:1:exon
so has part: feature:3245139-3245260:1:exon
so has part: feature:3245444-3245570:1:exon
so has part: feature:3245659-3245790:1:exon
so has part: feature:3245956-3246129:1:exon
so has part: feature:3246633-3246886:1:exon

XP_050756629.1
type: Protein
SIO_000068: ncbiprotein

position:3238181:1
position: 3238181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3246886:1
position: 3246886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3238181-3238291:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3238632-3238801:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3238888-3238963:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3239739-3239912:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3240310-3240435:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3241821-3241928:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3244065-3244191:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3244752-3244976:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3245139-3245260:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3245444-3245570:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3245659-3245790:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3245956-3246129:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3246633-3246886:1:exon

SWT1
type: Gene
subclass of: SO_0000704
RO_0002162: 33616
gene: SWT1
note: SWT1 RNA endoribonuclease homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3250236..3290183)
location: region:3250236-3290183:-1
so has part: feature:3250236-3290183:-1:exon
subclass of: SO_0000010

127019018
type: Gene
SIO_000068: ncbigene

position:3250236:-1
position: 3250236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3290183:-1
position: 3290183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3250236-3290183:-1:exon

SWT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: SWT1
product: SWT1 RNA endoribonuclease homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_050900889.1
SIO_010081: SWT1
subclass of: SO_0000673
so part of: SWT1
location: complement(join(3250236..3250416,3257636..3257700,3258602..3258668,3269579..3269707,3271396..3271604,3273032..3273177,3274319..3274457,3275725..3275876,3276712..3276848,3278136..3278229,3278795..3278983,3280563..3280664,3280800..3280929,3281573..3281629,3281757..3281822,3283174..3283927,3285498..3285556,3289038..3289112,3290013..3290182))
location: region:3250236-3290182:-1
so has part: feature:3290013-3290182:-1:exon
so has part: feature:3289038-3289112:-1:exon
so has part: feature:3285498-3285556:-1:exon
so has part: feature:3283174-3283927:-1:exon
so has part: feature:3281757-3281822:-1:exon
so has part: feature:3281573-3281629:-1:exon
so has part: feature:3280800-3280929:-1:exon
so has part: feature:3280563-3280664:-1:exon
so has part: feature:3278795-3278983:-1:exon
so has part: feature:3278136-3278229:-1:exon
so has part: feature:3276712-3276848:-1:exon
so has part: feature:3275725-3275876:-1:exon
so has part: feature:3274319-3274457:-1:exon
so has part: feature:3273032-3273177:-1:exon
so has part: feature:3271396-3271604:-1:exon
so has part: feature:3269579-3269707:-1:exon
so has part: feature:3258602-3258668:-1:exon
so has part: feature:3257636-3257700:-1:exon
so has part: feature:3250236-3250416:-1:exon

position:3290182:-1
position: 3290182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3290013-3290182:-1:exon

position:3290013:-1
position: 3290013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3289038-3289112:-1:exon

position:3289038:-1
position: 3289038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3289112:-1
position: 3289112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3285498-3285556:-1:exon

position:3285498:-1
position: 3285498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3285556:-1
position: 3285556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3283174-3283927:-1:exon

position:3283174:-1
position: 3283174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3283927:-1
position: 3283927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3281757-3281822:-1:exon

position:3281757:-1
position: 3281757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3281822:-1
position: 3281822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3281573-3281629:-1:exon

position:3281573:-1
position: 3281573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3281629:-1
position: 3281629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3280800-3280929:-1:exon

position:3280800:-1
position: 3280800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3280929:-1
position: 3280929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3280563-3280664:-1:exon

position:3280563:-1
position: 3280563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3280664:-1
position: 3280664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3278795-3278983:-1:exon

position:3278795:-1
position: 3278795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3278983:-1
position: 3278983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3278136-3278229:-1:exon

position:3278136:-1
position: 3278136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3278229:-1
position: 3278229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3276712-3276848:-1:exon

position:3276712:-1
position: 3276712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3276848:-1
position: 3276848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3275725-3275876:-1:exon

position:3275725:-1
position: 3275725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3275876:-1
position: 3275876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3274319-3274457:-1:exon

position:3274319:-1
position: 3274319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3274457:-1
position: 3274457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3273032-3273177:-1:exon

position:3273032:-1
position: 3273032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3273177:-1
position: 3273177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3271396-3271604:-1:exon

position:3271396:-1
position: 3271396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3271604:-1
position: 3271604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3269579-3269707:-1:exon

position:3269579:-1
position: 3269579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3269707:-1
position: 3269707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3258602-3258668:-1:exon

position:3258602:-1
position: 3258602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3258668:-1
position: 3258668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3257636-3257700:-1:exon

position:3257636:-1
position: 3257636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3257700:-1
position: 3257700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3250236-3250416:-1:exon

position:3250416:-1
position: 3250416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SWT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: SWT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcriptional protein SWT1 isoform X1
translation: MSKKKLKKLTGKEDCLDGQDDKNSEDTRSYNHTMKGETEFQRFKIEKDGQEKKRDQSSNISHGTDGRSQGKSPNRSKTTDNSLIQTEKQKRIVIQFKAKEIKHGKSTRTPDVVTTSRESYNKSRFDGTEGRRVWHSFAVQRDKALKKKREKVELCKLKLKAEQTMLEKFKSSVYDSHVPCKKANGSKKQSEDVGIPKKPSDNSTGTVRDDRPCTKKPNTLSRTWEEEYEEEYKEFSKKTRHVNKHTASHYSTETPQRWDSCKQKKQDAGSDQATGNSGTEEGDFEATALCFKQNFELPCTSDSYQEGEDIKSVQKSFEVFPPLQDSQNQETDQEMQIVEDLHVARVQKRMALSVVQTCGELTSMEIDLPEQDLNISAESFTSGLNILVVIDTNIMISHLEFVRSLKSEDIPGVGRLALIIPWVVLQELDNLKKGKMLQHVRDKAIPAVQFIYMCLKNQDSKLWGQSMQLASQKIYGLSDENNDDRVLQCCLQYQNLFPQAVVILCTDDKNLCNKAIVSEVKAFCKADLVTALQNLNVNRHQNCVQLQQSKCDTEFEKRERGDASLTARFPNILPDLEKNLGEALSCILETEMKIAFGNLWMEILYLKPPWTLANLLKCYKKHWMAVFGYVVPRSLLSTVECLYKHLCTDKPVDSSTVRILLQESKKLFHAFSSRSDYNGVLPQAYAEVNKLYQTLTQVRSDSEQDLSEDIMVLSENAVCEKMEAMTPNLQSSEEKKLHPSFHVAQENRHQEIWSVLEGVWNTINLYSIEIFQKLDPNTVTVTAKSSLEEAFLGLQKLLAAVNDIREGISRILTPTSSFQDIWTLYNFLISNEINNSIKFTAEELYECVSQELYRERLEVGCCQLAQLEHTMKQCHASVHTEAKNRGWL
SIO_010081: SWT1
subclass of: SO_0000673
so part of: SWT1
location: complement(join(3250311..3250416,3257636..3257700,3258602..3258668,3269579..3269707,3271396..3271604,3273032..3273177,3274319..3274457,3275725..3275876,3276712..3276848,3278136..3278229,3278795..3278983,3280563..3280664,3280800..3280929,3281573..3281629,3281757..3281822,3283174..3283927,3285498..3285556,3289038..3289103))
location: region:3250311-3289103:-1
so has part: feature:3289038-3289103:-1:exon
so has part: feature:3285498-3285556:-1:exon
so has part: feature:3283174-3283927:-1:exon
so has part: feature:3281757-3281822:-1:exon
so has part: feature:3281573-3281629:-1:exon
so has part: feature:3280800-3280929:-1:exon
so has part: feature:3280563-3280664:-1:exon
so has part: feature:3278795-3278983:-1:exon
so has part: feature:3278136-3278229:-1:exon
so has part: feature:3276712-3276848:-1:exon
so has part: feature:3275725-3275876:-1:exon
so has part: feature:3274319-3274457:-1:exon
so has part: feature:3273032-3273177:-1:exon
so has part: feature:3271396-3271604:-1:exon
so has part: feature:3269579-3269707:-1:exon
so has part: feature:3258602-3258668:-1:exon
so has part: feature:3257636-3257700:-1:exon
so has part: feature:3250311-3250416:-1:exon

XP_050756846.1
type: Protein
SIO_000068: ncbiprotein

position:3250311:-1
position: 3250311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3289103:-1
position: 3289103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3289038-3289103:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3285498-3285556:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3283174-3283927:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3281757-3281822:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3281573-3281629:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3280800-3280929:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3280563-3280664:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3278795-3278983:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3278136-3278229:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3276712-3276848:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3275725-3275876:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3274319-3274457:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3273032-3273177:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3271396-3271604:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3269579-3269707:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3258602-3258668:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3257636-3257700:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3250311-3250416:-1:exon

SWT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: SWT1
product: SWT1 RNA endoribonuclease homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_050900890.1
SIO_010081: SWT1
subclass of: SO_0000673
so part of: SWT1
location: complement(join(3268338..3268426,3269579..3269707,3271396..3271604,3273032..3273177,3274319..3274457,3275725..3275876,3276712..3276848,3278136..3278229,3278795..3278983,3280563..3280664,3280800..3280929,3281573..3281629,3281757..3281822,3283174..3283927,3285498..3285556,3289038..3289112,3290013..3290183))
location: region:3268338-3290183:-1
so has part: feature:3290013-3290183:-1:exon
so has part: feature:3289038-3289112:-1:exon
so has part: feature:3285498-3285556:-1:exon
so has part: feature:3283174-3283927:-1:exon
so has part: feature:3281757-3281822:-1:exon
so has part: feature:3281573-3281629:-1:exon
so has part: feature:3280800-3280929:-1:exon
so has part: feature:3280563-3280664:-1:exon
so has part: feature:3278795-3278983:-1:exon
so has part: feature:3278136-3278229:-1:exon
so has part: feature:3276712-3276848:-1:exon
so has part: feature:3275725-3275876:-1:exon
so has part: feature:3274319-3274457:-1:exon
so has part: feature:3273032-3273177:-1:exon
so has part: feature:3271396-3271604:-1:exon
so has part: feature:3269579-3269707:-1:exon
so has part: feature:3268338-3268426:-1:exon

position:3268338:-1
position: 3268338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3290013-3290183:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3289038-3289112:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3285498-3285556:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3283174-3283927:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3281757-3281822:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3281573-3281629:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3280800-3280929:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3280563-3280664:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3278795-3278983:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3278136-3278229:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3276712-3276848:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3275725-3275876:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3274319-3274457:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3273032-3273177:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3271396-3271604:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3269579-3269707:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3268338-3268426:-1:exon

position:3268426:-1
position: 3268426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SWT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: SWT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcriptional protein SWT1 isoform X2
translation: MSKKKLKKLTGKEDCLDGQDDKNSEDTRSYNHTMKGETEFQRFKIEKDGQEKKRDQSSNISHGTDGRSQGKSPNRSKTTDNSLIQTEKQKRIVIQFKAKEIKHGKSTRTPDVVTTSRESYNKSRFDGTEGRRVWHSFAVQRDKALKKKREKVELCKLKLKAEQTMLEKFKSSVYDSHVPCKKANGSKKQSEDVGIPKKPSDNSTGTVRDDRPCTKKPNTLSRTWEEEYEEEYKEFSKKTRHVNKHTASHYSTETPQRWDSCKQKKQDAGSDQATGNSGTEEGDFEATALCFKQNFELPCTSDSYQEGEDIKSVQKSFEVFPPLQDSQNQETDQEMQIVEDLHVARVQKRMALSVVQTCGELTSMEIDLPEQDLNISAESFTSGLNILVVIDTNIMISHLEFVRSLKSEDIPGVGRLALIIPWVVLQELDNLKKGKMLQHVRDKAIPAVQFIYMCLKNQDSKLWGQSMQLASQKIYGLSDENNDDRVLQCCLQYQNLFPQAVVILCTDDKNLCNKAIVSEVKAFCKADLVTALQNLNVNRHQNCVQLQQSKCDTEFEKRERGDASLTARFPNILPDLEKNLGEALSCILETEMKIAFGNLWMEILYLKPPWTLANLLKCYKKHWMAVFGYVVPRSLLSTVECLYKHLCTDKPVDSSTVRILLQESKKLFHAFSSRSDYNGVLPQAYAEVNKLYQTLTQVRSDSEQDLSEDIMVLSENAVCEKMEAMTPNLQSSEEKKLHPSFHVAQENRHQEIWSVLEGVWNTINLYSIEIFQKLDPNTVTVTAKSSLEEAFLGLQKLLAAVNDIREGISSFTVLMLSLSQQSCQVWLSQL
SIO_010081: SWT1
subclass of: SO_0000673
so part of: SWT1
location: complement(join(3268363..3268426,3269579..3269707,3271396..3271604,3273032..3273177,3274319..3274457,3275725..3275876,3276712..3276848,3278136..3278229,3278795..3278983,3280563..3280664,3280800..3280929,3281573..3281629,3281757..3281822,3283174..3283927,3285498..3285556,3289038..3289103))
location: region:3268363-3289103:-1
so has part: feature:3289038-3289103:-1:exon
so has part: feature:3285498-3285556:-1:exon
so has part: feature:3283174-3283927:-1:exon
so has part: feature:3281757-3281822:-1:exon
so has part: feature:3281573-3281629:-1:exon
so has part: feature:3280800-3280929:-1:exon
so has part: feature:3280563-3280664:-1:exon
so has part: feature:3278795-3278983:-1:exon
so has part: feature:3278136-3278229:-1:exon
so has part: feature:3276712-3276848:-1:exon
so has part: feature:3275725-3275876:-1:exon
so has part: feature:3274319-3274457:-1:exon
so has part: feature:3273032-3273177:-1:exon
so has part: feature:3271396-3271604:-1:exon
so has part: feature:3269579-3269707:-1:exon
so has part: feature:3268363-3268426:-1:exon

XP_050756847.1
type: Protein
SIO_000068: ncbiprotein

position:3268363:-1
position: 3268363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3289038-3289103:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3285498-3285556:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3283174-3283927:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3281757-3281822:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3281573-3281629:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3280800-3280929:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3280563-3280664:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3278795-3278983:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3278136-3278229:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3276712-3276848:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3275725-3275876:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3274319-3274457:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3273032-3273177:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3271396-3271604:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3269579-3269707:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3268363-3268426:-1:exon

TRMT1L
type: Gene
subclass of: SO_0000704
RO_0002162: 33616
gene: TRMT1L
note: tRNA methyltransferase 1 like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3290431..3311588
location: region:3290431-3311588:1
so has part: feature:3290431-3311588:1:exon
subclass of: SO_0000010

127019020
type: Gene
SIO_000068: ncbigene

position:3290431:1
position: 3290431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3311588:1
position: 3311588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3290431-3311588:1:exon

TRMT1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: TRMT1L
product: tRNA methyltransferase 1 like
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon
transcript id: XM_050900891.1
SIO_010081: TRMT1L
subclass of: SO_0000673
so part of: TRMT1L
location: join(3290431..3290573,3294295..3294447,3295603..3295713,3297556..3297669,3298729..3298793,3299346..3299475,3301356..3301479,3302556..3302635,3303723..3303969,3304902..3305114,3306378..3306568,3307936..3308014,3308806..3308972,3309654..3309713,3310136..3310262,3310385..3311588)
location: region:3290431-3311588:1
so has part: feature:3290431-3290573:1:exon
so has part: feature:3294295-3294447:1:exon
so has part: feature:3295603-3295713:1:exon
so has part: feature:3297556-3297669:1:exon
so has part: feature:3298729-3298793:1:exon
so has part: feature:3299346-3299475:1:exon
so has part: feature:3301356-3301479:1:exon
so has part: feature:3302556-3302635:1:exon
so has part: feature:3303723-3303969:1:exon
so has part: feature:3304902-3305114:1:exon
so has part: feature:3306378-3306568:1:exon
so has part: feature:3307936-3308014:1:exon
so has part: feature:3308806-3308972:1:exon
so has part: feature:3309654-3309713:1:exon
so has part: feature:3310136-3310262:1:exon
so has part: feature:3310385-3311588:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3290431-3290573:1:exon

position:3290573:1
position: 3290573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3294295-3294447:1:exon

position:3294295:1
position: 3294295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3294447:1
position: 3294447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3295603-3295713:1:exon

position:3295603:1
position: 3295603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3295713:1
position: 3295713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3297556-3297669:1:exon

position:3297556:1
position: 3297556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3297669:1
position: 3297669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3298729-3298793:1:exon

position:3298729:1
position: 3298729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3298793:1
position: 3298793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3299346-3299475:1:exon

position:3299346:1
position: 3299346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3299475:1
position: 3299475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3301356-3301479:1:exon

position:3301356:1
position: 3301356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3301479:1
position: 3301479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3302556-3302635:1:exon

position:3302556:1
position: 3302556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3302635:1
position: 3302635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3303723-3303969:1:exon

position:3303723:1
position: 3303723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3303969:1
position: 3303969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3304902-3305114:1:exon

position:3304902:1
position: 3304902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3305114:1
position: 3305114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3306378-3306568:1:exon

position:3306378:1
position: 3306378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3306568:1
position: 3306568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3307936-3308014:1:exon

position:3307936:1
position: 3307936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3308014:1
position: 3308014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3308806-3308972:1:exon

position:3308806:1
position: 3308806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3308972:1
position: 3308972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3309654-3309713:1:exon

position:3309654:1
position: 3309654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3309713:1
position: 3309713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3310136-3310262:1:exon

position:3310136:1
position: 3310136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3310262:1
position: 3310262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3310385-3311588:1:exon

position:3310385:1
position: 3310385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRMT1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: TRMT1L
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: TRMT1-like protein
translation: MAAEEAAEASLARLSPERRQPGREEDDDDEENPEGGGETAALNGVVVSGKVKSNNLDVKVTESELETEEKGTEEESTRESDSNILDVSSDYPREKHISIQRHLADLEKLADLKEGEFTMAVSQNTDLHVTDEKKPCPLCPEEKFKACYSHKLHRHLQNLHWKVSVEFEGYRMCICHLPCRPVKPNLVGDQTFSKMGAHYHCIICSATITRRTDMIGHINRHVNKGETESRFITVPAPKSSHEVLKESATDVQVLPNYSTPQKTDSYFNPKMKLNRQLIFCALAVLAEERKPIECLDAFGATGIMGLQWAKHLRSSVKVTINDCNENSVTMIQENCLLNKMKVKLNTKEDDNDEAMGDGEENTDTIEVTKMDANVIMHLRSFDFIHLDPFGTSVNYLDSAFRNVRNLGIVSLTSTDISSLYAKAQHVALRHYGCNIVRTEYYKELAARIVIAAVTRAAARCNKGIEVLLAVALEHFVLVVVRVLRGPSPADDSAKKIRYLIHCQWCEERIFQKEGNMVEENPYQQLPCDCHGSMPGKTAVVLGPLWSGALFNTGFLRRMLFEAVQYGLDEAQPLLKTLVCEADCTTLKHFSTHSPYDENKQEECGVYIKTPNTSAESYLVHGKRKSEEVIRNAAKRQKSESSAEHPAFYYNIHRHSIKGMNMPKLNKFLNYLSEAGYRVSRTHFDPMGVRTNAPLAQFKTILMKYSTPTYXGGQAEGPVHLAEDVQAGEQVQVAADGKAEAAEFPEDDKSGVAAAVFPKDYPTHCAAD
SIO_010081: TRMT1L
subclass of: SO_0000673
so part of: TRMT1L
location: join(3290447..3290573,3294295..3294447,3295603..3295713,3297556..3297669,3298729..3298793,3299346..3299475,3301356..3301479,3302556..3302635,3303723..3303969,3304902..3305114,3306378..3306568,3307936..3308014,3308806..3308972,3309654..3309713,3310136..3310262,3310385..3310699)
location: region:3290447-3310699:1
so has part: feature:3290447-3290573:1:exon
so has part: feature:3294295-3294447:1:exon
so has part: feature:3295603-3295713:1:exon
so has part: feature:3297556-3297669:1:exon
so has part: feature:3298729-3298793:1:exon
so has part: feature:3299346-3299475:1:exon
so has part: feature:3301356-3301479:1:exon
so has part: feature:3302556-3302635:1:exon
so has part: feature:3303723-3303969:1:exon
so has part: feature:3304902-3305114:1:exon
so has part: feature:3306378-3306568:1:exon
so has part: feature:3307936-3308014:1:exon
so has part: feature:3308806-3308972:1:exon
so has part: feature:3309654-3309713:1:exon
so has part: feature:3310136-3310262:1:exon
so has part: feature:3310385-3310699:1:exon

XP_050756848.1
type: Protein
SIO_000068: ncbiprotein

position:3290447:1
position: 3290447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3310699:1
position: 3310699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3290447-3290573:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3294295-3294447:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3295603-3295713:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3297556-3297669:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3298729-3298793:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3299346-3299475:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3301356-3301479:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3302556-3302635:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3303723-3303969:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3304902-3305114:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3306378-3306568:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3307936-3308014:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3308806-3308972:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3309654-3309713:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3310136-3310262:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3310385-3310699:1:exon

RNF2
type: Gene
subclass of: SO_0000704
RO_0002162: 33616
gene: RNF2
note: ring finger protein 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3315374..3339547)
location: region:3315374-3339547:-1
so has part: feature:3315374-3339547:-1:exon
subclass of: SO_0000010

127019021
type: Gene
SIO_000068: ncbigene

position:3315374:-1
position: 3315374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3339547:-1
position: 3339547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3315374-3339547:-1:exon

RNF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: RNF2
product: ring finger protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
transcript id: XM_050900893.1
SIO_010081: RNF2
subclass of: SO_0000673
so part of: RNF2
location: complement(join(3315374..3316519,3317474..3317645,3318783..3319055,3319874..3320089,3321325..3321485,3321859..3321947,3339501..3339547))
location: region:3315374-3339547:-1
so has part: feature:3339501-3339547:-1:exon
so has part: feature:3321859-3321947:-1:exon
so has part: feature:3321325-3321485:-1:exon
so has part: feature:3319874-3320089:-1:exon
so has part: feature:3318783-3319055:-1:exon
so has part: feature:3317474-3317645:-1:exon
so has part: feature:3315374-3316519:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3339501-3339547:-1:exon

position:3339501:-1
position: 3339501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3321859-3321947:-1:exon

position:3321859:-1
position: 3321859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3321947:-1
position: 3321947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3321325-3321485:-1:exon

position:3321325:-1
position: 3321325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3321485:-1
position: 3321485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3319874-3320089:-1:exon

position:3319874:-1
position: 3319874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3320089:-1
position: 3320089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3318783-3319055:-1:exon

position:3318783:-1
position: 3318783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3319055:-1
position: 3319055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3317474-3317645:-1:exon

position:3317474:-1
position: 3317474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3317645:-1
position: 3317645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3315374-3316519:-1:exon

position:3316519:-1
position: 3316519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RNF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: RNF2
product: ring finger protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
transcript id: XM_050900892.1
SIO_010081: RNF2
subclass of: SO_0000673
so part of: RNF2
location: complement(join(3315374..3316519,3317474..3317645,3318783..3319055,3319874..3320089,3321325..3321485,3321859..3321947,3327765..3327822))
location: region:3315374-3327822:-1
so has part: feature:3327765-3327822:-1:exon
so has part: feature:3321859-3321947:-1:exon
so has part: feature:3321325-3321485:-1:exon
so has part: feature:3319874-3320089:-1:exon
so has part: feature:3318783-3319055:-1:exon
so has part: feature:3317474-3317645:-1:exon
so has part: feature:3315374-3316519:-1:exon

position:3327822:-1
position: 3327822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3327765-3327822:-1:exon

position:3327765:-1
position: 3327765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3321859-3321947:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3321325-3321485:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3319874-3320089:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3318783-3319055:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3317474-3317645:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3315374-3316519:-1:exon

RNF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: RNF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RING2 isoform X1
translation: MASSRKSPAPWLKQDHHQAMSQAVQTNGTQPLSKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARISKHNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDNGDSSHCSNASTHSNQEAGPSNKRTKTSDDSGLELDNNNTTVAIDPVMDGASEIELVFRPHPTLMENDDSAQTRYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATANGQFTVLNGSFSLELVSEKYWKVNKPMELYYAPTKEHK
SIO_010081: RNF2
subclass of: SO_0000673
so part of: RNF2
location: complement(join(3316418..3316519,3317474..3317645,3318783..3319055,3319874..3320089,3321325..3321485,3321859..3321947,3327765..3327819))
location: region:3316418-3327819:-1
so has part: feature:3327765-3327819:-1:exon
so has part: feature:3321859-3321947:-1:exon
so has part: feature:3321325-3321485:-1:exon
so has part: feature:3319874-3320089:-1:exon
so has part: feature:3318783-3319055:-1:exon
so has part: feature:3317474-3317645:-1:exon
so has part: feature:3316418-3316519:-1:exon

XP_050756849.1
type: Protein
SIO_000068: ncbiprotein

position:3316418:-1
position: 3316418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3327819:-1
position: 3327819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3327765-3327819:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3321859-3321947:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3321325-3321485:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3319874-3320089:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3318783-3319055:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3317474-3317645:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3316418-3316519:-1:exon

RNF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: RNF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RING2 isoform X2
translation: MSQAVQTNGTQPLSKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARISKHNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDNGDSSHCSNASTHSNQEAGPSNKRTKTSDDSGLELDNNNTTVAIDPVMDGASEIELVFRPHPTLMENDDSAQTRYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATANGQFTVLNGSFSLELVSEKYWKVNKPMELYYAPTKEHK
SIO_010081: RNF2
subclass of: SO_0000673
so part of: RNF2
location: complement(join(3316418..3316519,3317474..3317645,3318783..3319055,3319874..3320089,3321325..3321485,3321859..3321945))
location: region:3316418-3321945:-1
so has part: feature:3321859-3321945:-1:exon
so has part: feature:3321325-3321485:-1:exon
so has part: feature:3319874-3320089:-1:exon
so has part: feature:3318783-3319055:-1:exon
so has part: feature:3317474-3317645:-1:exon
so has part: feature:3316418-3316519:-1:exon

XP_050756850.1
type: Protein
SIO_000068: ncbiprotein

position:3321945:-1
position: 3321945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3321859-3321945:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3321325-3321485:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3319874-3320089:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3318783-3319055:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3317474-3317645:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3316418-3316519:-1:exon

NIBAN1
type: Gene
subclass of: SO_0000704
RO_0002162: 33616
gene: NIBAN1
note: niban apoptosis regulator 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3364438..3433754
location: region:3364438-3433754:1
so has part: feature:3364438-3433754:1:exon
subclass of: SO_0000010

127019016
type: Gene
SIO_000068: ncbigene

position:3364438:1
position: 3364438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3433754:1
position: 3433754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3364438-3433754:1:exon

NIBAN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: NIBAN1
product: niban apoptosis regulator 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_050900886.1
SIO_010081: NIBAN1
subclass of: SO_0000673
so part of: NIBAN1
location: join(3364438..3364492,3396087..3396217,3397638..3397769,3398465..3398579,3400099..3400266,3416346..3416461,3422943..3423047,3423142..3423304,3424252..3424439,3424696..3424857,3427722..3427832,3428430..3428537,3430372..3430483,3431417..3433754)
location: region:3364438-3433754:1
so has part: feature:3364438-3364492:1:exon
so has part: feature:3396087-3396217:1:exon
so has part: feature:3397638-3397769:1:exon
so has part: feature:3398465-3398579:1:exon
so has part: feature:3400099-3400266:1:exon
so has part: feature:3416346-3416461:1:exon
so has part: feature:3422943-3423047:1:exon
so has part: feature:3423142-3423304:1:exon
so has part: feature:3424252-3424439:1:exon
so has part: feature:3424696-3424857:1:exon
so has part: feature:3427722-3427832:1:exon
so has part: feature:3428430-3428537:1:exon
so has part: feature:3430372-3430483:1:exon
so has part: feature:3431417-3433754:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3364438-3364492:1:exon

position:3364492:1
position: 3364492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3396087-3396217:1:exon

position:3396087:1
position: 3396087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3396217:1
position: 3396217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3397638-3397769:1:exon

position:3397638:1
position: 3397638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3397769:1
position: 3397769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3398465-3398579:1:exon

position:3398465:1
position: 3398465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3398579:1
position: 3398579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3400099-3400266:1:exon

position:3400099:1
position: 3400099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3400266:1
position: 3400266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3416346-3416461:1:exon

position:3416346:1
position: 3416346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3416461:1
position: 3416461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3422943-3423047:1:exon

position:3422943:1
position: 3422943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3423047:1
position: 3423047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3423142-3423304:1:exon

position:3423142:1
position: 3423142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3423304:1
position: 3423304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3424252-3424439:1:exon

position:3424252:1
position: 3424252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3424439:1
position: 3424439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3424696-3424857:1:exon

position:3424696:1
position: 3424696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3424857:1
position: 3424857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3427722-3427832:1:exon

position:3427722:1
position: 3427722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3427832:1
position: 3427832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3428430-3428537:1:exon

position:3428430:1
position: 3428430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3428537:1
position: 3428537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3430372-3430483:1:exon

position:3430372:1
position: 3430372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3430483:1
position: 3430483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3431417-3433754:1:exon

position:3431417:1
position: 3431417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NIBAN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: NIBAN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Niban 1
translation: MGGSASSLLDESKCTYIRGKTEAIIKNFSPHYRRQYAVAFCKHVQDELEQHRDSQSRFLKTKPPLEAGTVLYEAELLHFAEDLKKWKDRYVVIKNDYTVDCFETKEAYQKGASPKYHVLPAGGKVLTSEEDYNLLSDKHFPDPVGSSEKEVAQAFVQLPREFPVYLWQPFARHSYYCFPEPEAQRRFSAALGDCVRHSNHDFLKQTTYEVEAFLQAIQFFRQEKGHYGTWEMITGNEKEILSNLVMEELLPNLQTMILPKMKGKRNDRKRAWFGIVEETYGLVQQQVSEGLSTLKEECRDFAKTLEGTIRSDMDQILNSKNFLAGKIKATVSEPAQKCCTENIQPFLTSILEELMGPVSSGFTEVRSLFDKEVNEIIQDFQKTNDITKLKENVDQLLNLPFNSVKMEPCYLKVNLLQELLQDLKSRFKVYHIDFVIQRTQNFMQELMENAVYTFEQLFSPSRQADSAKVATTIEKVKLRVLKQYDYDSSTIRKKIFQEALVQITLPTMQKTLASTCKPELQKYEQFIFADYTSVIQVENVYEEILHQTLLEETLKVIKEAAIMKKHNLFEDNLNLPCESVSSLTDLKTPSGSAQTTPAKKPSTARAETSDTETQSDETLIVTEKISWEKDADDRKSSDKEAVTSVNTAGDQASKSEEVVITDISEKQESLSATLTKQEVAEEKSPLENEDTVKAEFLANTEKELKTQQEAVEEKVAPGTETAAKDFGASPKKELKVHEGAVEEKVTSESQTATDAVFVSGTEKESKAQEEVSEIKLTSPHDNVAEAEILVNAEKKIKVEKEIMEELSQSENAVGTGFEEDSKKESNDQGASTETRVISQDENTGKGGFGDNPEKESKSEEKSCKSPDDVNEIRSLLMVTVEIPADTPAENIKICEGEILKFQEHNKGNDELSKMAAAEIQVSQMMMNNDAAECAEFKEDRPSSSSLGTDGTNLVNVSKGACNMAQAEWLVESSDTPREAKAEVEIKQSVWYTGVGSCRSDRWQPEEHAENVSEGKRLDEEEGGTGNSQAVPVEVGTESFFHNPAENAGTTHVPILATENPTTGLLDVPVSLVLEQGEVSAVEVTGDTEAGEGGGKPEDESSSHTEIKSTEVQDIVTEENREDSYAQQNSEE
SIO_010081: NIBAN1
subclass of: SO_0000673
so part of: NIBAN1
location: join(3364438..3364492,3396087..3396217,3397638..3397769,3398465..3398579,3400099..3400266,3416346..3416461,3422943..3423047,3423142..3423304,3424252..3424439,3424696..3424857,3427722..3427832,3428430..3428537,3430372..3430483,3431417..3433146)
location: region:3364438-3433146:1
so has part: feature:3364438-3364492:1:exon
so has part: feature:3396087-3396217:1:exon
so has part: feature:3397638-3397769:1:exon
so has part: feature:3398465-3398579:1:exon
so has part: feature:3400099-3400266:1:exon
so has part: feature:3416346-3416461:1:exon
so has part: feature:3422943-3423047:1:exon
so has part: feature:3423142-3423304:1:exon
so has part: feature:3424252-3424439:1:exon
so has part: feature:3424696-3424857:1:exon
so has part: feature:3427722-3427832:1:exon
so has part: feature:3428430-3428537:1:exon
so has part: feature:3430372-3430483:1:exon
so has part: feature:3431417-3433146:1:exon

XP_050756843.1
type: Protein
SIO_000068: ncbiprotein

position:3433146:1
position: 3433146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3364438-3364492:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3396087-3396217:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3397638-3397769:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3398465-3398579:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3400099-3400266:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3416346-3416461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3422943-3423047:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3423142-3423304:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3424252-3424439:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3424696-3424857:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3427722-3427832:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3428430-3428537:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3430372-3430483:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3431417-3433146:1:exon

EDEM3
type: Gene
subclass of: SO_0000704
RO_0002162: 33616
gene: EDEM3
note: ER degradation enhancing alpha-mannosidase like protein 3; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3436519..3466788
location: region:3436519-3466788:1
so has part: feature:3436519-3466788:1:exon
subclass of: SO_0000010

127019017
type: Gene
SIO_000068: ncbigene

position:3436519:1
position: 3436519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3466788:1
position: 3466788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3436519-3466788:1:exon

EDEM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: EDEM3
product: ER degradation enhancing alpha-mannosidase like protein 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_050900887.1
SIO_010081: EDEM3
subclass of: SO_0000673
so part of: EDEM3
location: join(3436519..3436694,3438319..3438364,3442741..3442841,3445460..3445499,3446931..3447043,3447762..3447915,3449073..3449207,3450369..3450474,3451076..3451173,3452510..3452635,3453223..3453306,3454824..3454907,3455459..3455583,3456086..3456251,3458821..3458975,3459754..3459907,3460419..3460613,3461403..3461568,3462057..3462242,3463109..3463156,3463799..3466788)
location: region:3436519-3466788:1
so has part: feature:3436519-3436694:1:exon
so has part: feature:3438319-3438364:1:exon
so has part: feature:3442741-3442841:1:exon
so has part: feature:3445460-3445499:1:exon
so has part: feature:3446931-3447043:1:exon
so has part: feature:3447762-3447915:1:exon
so has part: feature:3449073-3449207:1:exon
so has part: feature:3450369-3450474:1:exon
so has part: feature:3451076-3451173:1:exon
so has part: feature:3452510-3452635:1:exon
so has part: feature:3453223-3453306:1:exon
so has part: feature:3454824-3454907:1:exon
so has part: feature:3455459-3455583:1:exon
so has part: feature:3456086-3456251:1:exon
so has part: feature:3458821-3458975:1:exon
so has part: feature:3459754-3459907:1:exon
so has part: feature:3460419-3460613:1:exon
so has part: feature:3461403-3461568:1:exon
so has part: feature:3462057-3462242:1:exon
so has part: feature:3463109-3463156:1:exon
so has part: feature:3463799-3466788:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3436519-3436694:1:exon

position:3436694:1
position: 3436694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3438319-3438364:1:exon

position:3438319:1
position: 3438319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3438364:1
position: 3438364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3442741-3442841:1:exon

position:3442741:1
position: 3442741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3442841:1
position: 3442841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3445460-3445499:1:exon

position:3445460:1
position: 3445460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3445499:1
position: 3445499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3446931-3447043:1:exon

position:3446931:1
position: 3446931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3447043:1
position: 3447043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3447762-3447915:1:exon

position:3447762:1
position: 3447762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3447915:1
position: 3447915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3449073-3449207:1:exon

position:3449073:1
position: 3449073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3449207:1
position: 3449207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3450369-3450474:1:exon

position:3450369:1
position: 3450369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3450474:1
position: 3450474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3451076-3451173:1:exon

position:3451076:1
position: 3451076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3451173:1
position: 3451173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3452510-3452635:1:exon

position:3452510:1
position: 3452510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3452635:1
position: 3452635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3453223-3453306:1:exon

position:3453223:1
position: 3453223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3453306:1
position: 3453306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3454824-3454907:1:exon

position:3454824:1
position: 3454824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3454907:1
position: 3454907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3455459-3455583:1:exon

position:3455459:1
position: 3455459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3455583:1
position: 3455583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3456086-3456251:1:exon

position:3456086:1
position: 3456086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3456251:1
position: 3456251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3458821-3458975:1:exon

position:3458821:1
position: 3458821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3458975:1
position: 3458975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3459754-3459907:1:exon

position:3459754:1
position: 3459754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3459907:1
position: 3459907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3460419-3460613:1:exon

position:3460419:1
position: 3460419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3460613:1
position: 3460613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3461403-3461568:1:exon

position:3461403:1
position: 3461403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3461568:1
position: 3461568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3462057-3462242:1:exon

position:3462057:1
position: 3462057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3462242:1
position: 3462242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3463109-3463156:1:exon

position:3463109:1
position: 3463109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3463156:1
position: 3463156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3463799-3466788:1:exon

position:3463799:1
position: 3463799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EDEM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: EDEM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ER degradation-enhancing alpha-mannosidase-like protein 3 isoform X1
translation: MSGAAGCQGGGGGGGGGDRGPRWRRPWKLLALGLLSASSVLAAAPGAGAMSKEEKRRLGNQVLEMFDHAYSNYMEHAYPADELMPLTCRGRVRGQEPSRGDVDDALGKFSLTLIDTLDTLVVLNKTKEFEEAVKKVIKDVNLDNDIVVSVFETNIRVLGGLLGGHSVAIMLKEKGEYMQWYNGELLHMAKELGYKLLPAFNTTSGLPYPRVNLKFGVRHPEARTGTETDTCTACAGTLILEFAALSRFTGTSIFEEYARKALDFIWEKRQRSSNLVGVTINIHTGDWVRKDSGVGAGIDSYYEYLLKAYVLLGDDSFLERFNTHYDAIMRYISQPPLLLDVHIHKPMLNARTWMDSLLAFFPGLQVLKGDIRPAIETHEMLYQVIKKHNFLPEAFTTDFRVHWAQHPLRPEFAESTYFLYKATGDPYYLEVGKTLIENLNKYARVPCGFAAMKDVRTGSHEDRMDSFFLAEMFKYLYLLFADKEDMIFDIEDYIFTTEAHLLPLWLSTTNQTISKKNTTTEYTELDDSNFDWTCPNTQILFPNDPMFAQSIREPLKNVVDKSCPRGISRAEESLGSGPKPPLRARDFMASNPEHLEILKKMGVSLIHLKDGRVQLVQHAVQAASSLDAEDGLRFMQEMIELSSQQQKEQQLPPRAVQIVSHPFFGRVVLTAGPAQFGMDLSKHKAGTRGFVATIKPYNGCSEITNPEAVKEKIALMQRGQCMFAEKARNIQKAGAIGGIVIDDNEGSSSDTAPLFQMAGDGKNTDDITIPMLFLFNKEGNIILDAIREYEAVEVLLSDKAKDRATIFKGKMIPNYIIDSNLEMENMDQKSSENDSHKQNSEEATSASQDVGAVSEEPEEGESSDVTDPDSLSPANSDSDSVSISNRDSYVPGTDEASAPEPACTQGDDQPQEQKTETESNSKVNWDNKVQPMESILADWNEDIEAFEMMEKDEL
SIO_010081: EDEM3
subclass of: SO_0000673
so part of: EDEM3
location: join(3436519..3436694,3438319..3438364,3442741..3442841,3445460..3445499,3446931..3447043,3447762..3447915,3449073..3449207,3450369..3450474,3451076..3451173,3452510..3452635,3453223..3453306,3454824..3454907,3455459..3455583,3456086..3456251,3458821..3458975,3459754..3459907,3460419..3460613,3461403..3461568,3462057..3462242,3463109..3463156,3463799..3464205)
location: region:3436519-3464205:1
so has part: feature:3436519-3436694:1:exon
so has part: feature:3438319-3438364:1:exon
so has part: feature:3442741-3442841:1:exon
so has part: feature:3445460-3445499:1:exon
so has part: feature:3446931-3447043:1:exon
so has part: feature:3447762-3447915:1:exon
so has part: feature:3449073-3449207:1:exon
so has part: feature:3450369-3450474:1:exon
so has part: feature:3451076-3451173:1:exon
so has part: feature:3452510-3452635:1:exon
so has part: feature:3453223-3453306:1:exon
so has part: feature:3454824-3454907:1:exon
so has part: feature:3455459-3455583:1:exon
so has part: feature:3456086-3456251:1:exon
so has part: feature:3458821-3458975:1:exon
so has part: feature:3459754-3459907:1:exon
so has part: feature:3460419-3460613:1:exon
so has part: feature:3461403-3461568:1:exon
so has part: feature:3462057-3462242:1:exon
so has part: feature:3463109-3463156:1:exon
so has part: feature:3463799-3464205:1:exon

XP_050756844.1
type: Protein
SIO_000068: ncbiprotein

position:3464205:1
position: 3464205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3436519-3436694:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3438319-3438364:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3442741-3442841:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3445460-3445499:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3446931-3447043:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3447762-3447915:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3449073-3449207:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3450369-3450474:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3451076-3451173:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3452510-3452635:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3453223-3453306:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3454824-3454907:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3455459-3455583:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3456086-3456251:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3458821-3458975:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3459754-3459907:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3460419-3460613:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3461403-3461568:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3462057-3462242:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3463109-3463156:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3463799-3464205:1:exon

EDEM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: EDEM3
product: ER degradation enhancing alpha-mannosidase like protein 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
transcript id: XM_050900888.1
SIO_010081: EDEM3
subclass of: SO_0000673
so part of: EDEM3
location: join(3436606..3436694,3438319..3438364,3442741..3442841,3445460..3445499,3446931..3447043,3447762..3447915,3449073..3449207,3450369..3450474,3451076..3451173,3452510..3452635,3453223..3453306,3454824..3454907,3455459..3455583,3456086..3456251,3458821..3458975,3459754..3459907,3460419..3460613,3461403..3461568,3462057..3462242,3463799..3466788)
location: region:3436606-3466788:1
so has part: feature:3436606-3436694:1:exon
so has part: feature:3438319-3438364:1:exon
so has part: feature:3442741-3442841:1:exon
so has part: feature:3445460-3445499:1:exon
so has part: feature:3446931-3447043:1:exon
so has part: feature:3447762-3447915:1:exon
so has part: feature:3449073-3449207:1:exon
so has part: feature:3450369-3450474:1:exon
so has part: feature:3451076-3451173:1:exon
so has part: feature:3452510-3452635:1:exon
so has part: feature:3453223-3453306:1:exon
so has part: feature:3454824-3454907:1:exon
so has part: feature:3455459-3455583:1:exon
so has part: feature:3456086-3456251:1:exon
so has part: feature:3458821-3458975:1:exon
so has part: feature:3459754-3459907:1:exon
so has part: feature:3460419-3460613:1:exon
so has part: feature:3461403-3461568:1:exon
so has part: feature:3462057-3462242:1:exon
so has part: feature:3463799-3466788:1:exon

position:3436606:1
position: 3436606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3436606-3436694:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3438319-3438364:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3442741-3442841:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3445460-3445499:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3446931-3447043:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3447762-3447915:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3449073-3449207:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3450369-3450474:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3451076-3451173:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3452510-3452635:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3453223-3453306:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3454824-3454907:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3455459-3455583:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3456086-3456251:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3458821-3458975:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3459754-3459907:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3460419-3460613:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3461403-3461568:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3462057-3462242:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3463799-3466788:1:exon

EDEM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: EDEM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ER degradation-enhancing alpha-mannosidase-like protein 3 isoform X2
translation: MSKEEKRRLGNQVLEMFDHAYSNYMEHAYPADELMPLTCRGRVRGQEPSRGDVDDALGKFSLTLIDTLDTLVVLNKTKEFEEAVKKVIKDVNLDNDIVVSVFETNIRVLGGLLGGHSVAIMLKEKGEYMQWYNGELLHMAKELGYKLLPAFNTTSGLPYPRVNLKFGVRHPEARTGTETDTCTACAGTLILEFAALSRFTGTSIFEEYARKALDFIWEKRQRSSNLVGVTINIHTGDWVRKDSGVGAGIDSYYEYLLKAYVLLGDDSFLERFNTHYDAIMRYISQPPLLLDVHIHKPMLNARTWMDSLLAFFPGLQVLKGDIRPAIETHEMLYQVIKKHNFLPEAFTTDFRVHWAQHPLRPEFAESTYFLYKATGDPYYLEVGKTLIENLNKYARVPCGFAAMKDVRTGSHEDRMDSFFLAEMFKYLYLLFADKEDMIFDIEDYIFTTEAHLLPLWLSTTNQTISKKNTTTEYTELDDSNFDWTCPNTQILFPNDPMFAQSIREPLKNVVDKSCPRGISRAEESLGSGPKPPLRARDFMASNPEHLEILKKMGVSLIHLKDGRVQLVQHAVQAASSLDAEDGLRFMQEMIELSSQQQKEQQLPPRAVQIVSHPFFGRVVLTAGPAQFGMDLSKHKAGTRGFVATIKPYNGCSEITNPEAVKEKIALMQRGQCMFAEKARNIQKAGAIGGIVIDDNEGSSSDTAPLFQMAGDGKNTDDITIPMLFLFNKEGNIILDAIREYEAVEVLLSDKAKDRDLEMENMDQKSSENDSHKQNSEEATSASQDVGAVSEEPEEGESSDVTDPDSLSPANSDSDSVSISNRDSYVPGTDEASAPEPACTQGDDQPQEQKTETESNSKVNWDNKVQPMESILADWNEDIEAFEMMEKDEL
SIO_010081: EDEM3
subclass of: SO_0000673
so part of: EDEM3
location: join(3436666..3436694,3438319..3438364,3442741..3442841,3445460..3445499,3446931..3447043,3447762..3447915,3449073..3449207,3450369..3450474,3451076..3451173,3452510..3452635,3453223..3453306,3454824..3454907,3455459..3455583,3456086..3456251,3458821..3458975,3459754..3459907,3460419..3460613,3461403..3461568,3462057..3462242,3463799..3464205)
location: region:3436666-3464205:1
so has part: feature:3436666-3436694:1:exon
so has part: feature:3438319-3438364:1:exon
so has part: feature:3442741-3442841:1:exon
so has part: feature:3445460-3445499:1:exon
so has part: feature:3446931-3447043:1:exon
so has part: feature:3447762-3447915:1:exon
so has part: feature:3449073-3449207:1:exon
so has part: feature:3450369-3450474:1:exon
so has part: feature:3451076-3451173:1:exon
so has part: feature:3452510-3452635:1:exon
so has part: feature:3453223-3453306:1:exon
so has part: feature:3454824-3454907:1:exon
so has part: feature:3455459-3455583:1:exon
so has part: feature:3456086-3456251:1:exon
so has part: feature:3458821-3458975:1:exon
so has part: feature:3459754-3459907:1:exon
so has part: feature:3460419-3460613:1:exon
so has part: feature:3461403-3461568:1:exon
so has part: feature:3462057-3462242:1:exon
so has part: feature:3463799-3464205:1:exon

XP_050756845.1
type: Protein
SIO_000068: ncbiprotein

position:3436666:1
position: 3436666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3436666-3436694:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3438319-3438364:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3442741-3442841:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3445460-3445499:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3446931-3447043:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3447762-3447915:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3449073-3449207:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3450369-3450474:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3451076-3451173:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3452510-3452635:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3453223-3453306:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3454824-3454907:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3455459-3455583:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3456086-3456251:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3458821-3458975:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3459754-3459907:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3460419-3460613:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3461403-3461568:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3462057-3462242:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3463799-3464205:1:exon

C8H1orf21
type: Gene
subclass of: SO_0000704
RO_0002162: 33616
gene: C8H1orf21
note: chromosome 8 C1orf21 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3479214..3606015)
location: region:3479214-3606015:-1
so has part: feature:3479214-3606015:-1:exon
subclass of: SO_0000010

127019369
type: Gene
SIO_000068: ncbigene

position:3479214:-1
position: 3479214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3606015:-1
position: 3606015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3479214-3606015:-1:exon

C8H1orf21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: C8H1orf21
product: chromosome 8 C1orf21 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_050901375.1
SIO_010081: C8H1orf21
subclass of: SO_0000673
so part of: C8H1orf21
location: complement(join(3479214..3480178,3490537..3490597,3495433..3495509,3528882..3528976,3555009..3555214,3605885..3606015))
location: region:3479214-3606015:-1
so has part: feature:3605885-3606015:-1:exon
so has part: feature:3555009-3555214:-1:exon
so has part: feature:3528882-3528976:-1:exon
so has part: feature:3495433-3495509:-1:exon
so has part: feature:3490537-3490597:-1:exon
so has part: feature:3479214-3480178:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3605885-3606015:-1:exon

position:3605885:-1
position: 3605885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3555009-3555214:-1:exon

position:3555009:-1
position: 3555009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3555214:-1
position: 3555214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3528882-3528976:-1:exon

position:3528882:-1
position: 3528882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3528976:-1
position: 3528976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3495433-3495509:-1:exon

position:3495433:-1
position: 3495433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3495509:-1
position: 3495509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3490537-3490597:-1:exon

position:3490537:-1
position: 3490537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3490597:-1
position: 3490597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3479214-3480178:-1:exon

position:3480178:-1
position: 3480178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C8H1orf21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: C8H1orf21
product: chromosome 8 C1orf21 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_050901376.1
SIO_010081: C8H1orf21
subclass of: SO_0000673
so part of: C8H1orf21
location: complement(join(3479214..3480178,3490537..3490597,3495433..3495509,3528882..3528976,3555009..3555214,3596319..3596365))
location: region:3479214-3596365:-1
so has part: feature:3596319-3596365:-1:exon
so has part: feature:3555009-3555214:-1:exon
so has part: feature:3528882-3528976:-1:exon
so has part: feature:3495433-3495509:-1:exon
so has part: feature:3490537-3490597:-1:exon
so has part: feature:3479214-3480178:-1:exon

position:3596365:-1
position: 3596365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3596319-3596365:-1:exon

position:3596319:-1
position: 3596319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3555009-3555214:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3528882-3528976:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3495433-3495509:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3490537-3490597:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3479214-3480178:-1:exon

C8H1orf21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: C8H1orf21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C1orf21 homolog isoform X1
translation: MGCASAKHVSTVQNEEETQKGKNYQNGDVFGDEYRIKPVEEVKYMKNGGEDDQKIAARNQENLEKSASSNVRLKSNKEIPGLVHQPRANMHISESQQEFFRMLDEKIEKGRDYCSEEEDVT
SIO_010081: C8H1orf21
subclass of: SO_0000673
so part of: C8H1orf21
location: complement(join(3480140..3480178,3490537..3490597,3495433..3495509,3528882..3528976,3555009..3555102))
location: region:3480140-3555102:-1
so has part: feature:3555009-3555102:-1:exon
so has part: feature:3528882-3528976:-1:exon
so has part: feature:3495433-3495509:-1:exon
so has part: feature:3490537-3490597:-1:exon
so has part: feature:3480140-3480178:-1:exon

XP_050757332.1
type: Protein
SIO_000068: ncbiprotein

position:3480140:-1
position: 3480140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3555102:-1
position: 3555102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3555009-3555102:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3528882-3528976:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3495433-3495509:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3490537-3490597:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3480140-3480178:-1:exon

C8H1orf21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: C8H1orf21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C1orf21 homolog isoform X1
translation: MGCASAKHVSTVQNEEETQKGKNYQNGDVFGDEYRIKPVEEVKYMKNGGEDDQKIAARNQENLEKSASSNVRLKSNKEIPGLVHQPRANMHISESQQEFFRMLDEKIEKGRDYCSEEEDVT
SIO_010081: C8H1orf21
subclass of: SO_0000673
so part of: C8H1orf21
location: complement(join(3480140..3480178,3490537..3490597,3495433..3495509,3528882..3528976,3555009..3555102))
location: region:3480140-3555102:-1
so has part: feature:3555009-3555102:-1:exon
so has part: feature:3528882-3528976:-1:exon
so has part: feature:3495433-3495509:-1:exon
so has part: feature:3490537-3490597:-1:exon
so has part: feature:3480140-3480178:-1:exon

XP_050757333.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3555009-3555102:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3528882-3528976:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3495433-3495509:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3490537-3490597:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3480140-3480178:-1:exon

C8H1orf21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: C8H1orf21
product: chromosome 8 C1orf21 homolog, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_050901377.1
SIO_010081: C8H1orf21
subclass of: SO_0000673
so part of: C8H1orf21
location: complement(join(3489855..3489932,3490537..3490597,3495433..3495509,3528882..3528976,3555009..3555214,3605885..3606015))
location: region:3489855-3606015:-1
so has part: feature:3605885-3606015:-1:exon
so has part: feature:3555009-3555214:-1:exon
so has part: feature:3528882-3528976:-1:exon
so has part: feature:3495433-3495509:-1:exon
so has part: feature:3490537-3490597:-1:exon
so has part: feature:3489855-3489932:-1:exon

position:3489855:-1
position: 3489855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3605885-3606015:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3555009-3555214:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3528882-3528976:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3495433-3495509:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3490537-3490597:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3489855-3489932:-1:exon

position:3489932:-1
position: 3489932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C8H1orf21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: C8H1orf21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C1orf21 homolog isoform X2
translation: MGCASAKHVSTVQNEEETQKGKNYQNGDVFGDEYRIKPVEEVKYMKNGGEDDQKIAARNQENLEKSASSNVRLKSNKEIPGLVHQPRANMHISESQQEFFRMLDEKIEKVF
SIO_010081: C8H1orf21
subclass of: SO_0000673
so part of: C8H1orf21
location: complement(join(3489924..3489932,3490537..3490597,3495433..3495509,3528882..3528976,3555009..3555102))
location: region:3489924-3555102:-1
so has part: feature:3555009-3555102:-1:exon
so has part: feature:3528882-3528976:-1:exon
so has part: feature:3495433-3495509:-1:exon
so has part: feature:3490537-3490597:-1:exon
so has part: feature:3489924-3489932:-1:exon

XP_050757334.1
type: Protein
SIO_000068: ncbiprotein

position:3489924:-1
position: 3489924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3555009-3555102:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3528882-3528976:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3495433-3495509:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3490537-3490597:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3489924-3489932:-1:exon

TSEN15
type: Gene
subclass of: SO_0000704
RO_0002162: 33616
gene: TSEN15
note: tRNA splicing endonuclease subunit 15; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3684033..3696945)
location: region:3684033-3696945:-1
so has part: feature:3684033-3696945:-1:exon
subclass of: SO_0000010

127019263
type: Gene
SIO_000068: ncbigene

position:3684033:-1
position: 3684033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3696945:-1
position: 3696945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3684033-3696945:-1:exon

TSEN15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: TSEN15
product: tRNA splicing endonuclease subunit 15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
transcript id: XM_050901240.1
SIO_010081: TSEN15
subclass of: SO_0000673
so part of: TSEN15
location: complement(join(3684033..3684468,3694581..3694716,3695960..3696041,3696907..3696945))
location: region:3684033-3696945:-1
so has part: feature:3696907-3696945:-1:exon
so has part: feature:3695960-3696041:-1:exon
so has part: feature:3694581-3694716:-1:exon
so has part: feature:3684033-3684468:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3696907-3696945:-1:exon

position:3696907:-1
position: 3696907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3695960-3696041:-1:exon

position:3695960:-1
position: 3695960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3696041:-1
position: 3696041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3694581-3694716:-1:exon

position:3694581:-1
position: 3694581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3694716:-1
position: 3694716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3684033-3684468:-1:exon

position:3684468:-1
position: 3684468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TSEN15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: TSEN15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-splicing endonuclease subunit Sen15
translation: MATHPTFTEMMSLDISDSAQIYAAFVVYLDLLEGRNWHEVKHVGVAELQLVCLHAREREQDSLQVMVPVPVHISLSHERIREIMKKASLPQDDPDTPLSVTLAIVESDSTVVYYKMTDGFVIPDPPDDTEDVDNKQWRKKRKKLFK
SIO_010081: TSEN15
subclass of: SO_0000673
so part of: TSEN15
location: complement(join(3684264..3684468,3694581..3694716,3695960..3696041,3696907..3696924))
location: region:3684264-3696924:-1
so has part: feature:3696907-3696924:-1:exon
so has part: feature:3695960-3696041:-1:exon
so has part: feature:3694581-3694716:-1:exon
so has part: feature:3684264-3684468:-1:exon

XP_050757197.1
type: Protein
SIO_000068: ncbiprotein

position:3684264:-1
position: 3684264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3696924:-1
position: 3696924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3696907-3696924:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3695960-3696041:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3694581-3694716:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3684264-3684468:-1:exon

COLGALT2
type: Gene
subclass of: SO_0000704
RO_0002162: 33616
gene: COLGALT2
note: collagen beta(1-O)galactosyltransferase 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3701731..3757959
location: region:3701731-3757959:1
so has part: feature:3701731-3757959:1:exon
subclass of: SO_0000010

127018940
type: Gene
SIO_000068: ncbigene

position:3701731:1
position: 3701731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3757959:1
position: 3757959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3701731-3757959:1:exon

COLGALT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: COLGALT2
product: collagen beta(1-O)galactosyltransferase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
transcript id: XM_050900767.1
SIO_010081: COLGALT2
subclass of: SO_0000673
so part of: COLGALT2
location: join(3701731..3701896,3737822..3737932,3739429..3739546,3740298..3740432,3744825..3745029,3750085..3750204,3750684..3750760,3752701..3752807,3753633..3753765,3755064..3755191,3755709..3755915,3756349..3757959)
location: region:3701731-3757959:1
so has part: feature:3701731-3701896:1:exon
so has part: feature:3737822-3737932:1:exon
so has part: feature:3739429-3739546:1:exon
so has part: feature:3740298-3740432:1:exon
so has part: feature:3744825-3745029:1:exon
so has part: feature:3750085-3750204:1:exon
so has part: feature:3750684-3750760:1:exon
so has part: feature:3752701-3752807:1:exon
so has part: feature:3753633-3753765:1:exon
so has part: feature:3755064-3755191:1:exon
so has part: feature:3755709-3755915:1:exon
so has part: feature:3756349-3757959:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3701731-3701896:1:exon

position:3701896:1
position: 3701896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3737822-3737932:1:exon

position:3737822:1
position: 3737822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3737932:1
position: 3737932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3739429-3739546:1:exon

position:3739429:1
position: 3739429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3739546:1
position: 3739546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3740298-3740432:1:exon

position:3740298:1
position: 3740298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3740432:1
position: 3740432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3744825-3745029:1:exon

position:3744825:1
position: 3744825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3745029:1
position: 3745029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3750085-3750204:1:exon

position:3750085:1
position: 3750085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3750204:1
position: 3750204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3750684-3750760:1:exon

position:3750684:1
position: 3750684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3750760:1
position: 3750760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3752701-3752807:1:exon

position:3752701:1
position: 3752701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3752807:1
position: 3752807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3753633-3753765:1:exon

position:3753633:1
position: 3753633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3753765:1
position: 3753765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3755064-3755191:1:exon

position:3755064:1
position: 3755064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3755191:1
position: 3755191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3755709-3755915:1:exon

position:3755709:1
position: 3755709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3755915:1
position: 3755915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3756349-3757959:1:exon

position:3756349:1
position: 3756349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

COLGALT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: COLGALT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: procollagen galactosyltransferase 2
translation: MEDPQSYPEEIGPKHWPSSRFTHVMKLRQAALRAAREKWSDYILFIDADNLLTNPQTLNLMIAENKTLVAPMLESRSLYSNFWCGITPQGYYKRTLDYPLIREWKRTGCFAVPMIHSTFLIDLRKEASAKLMFYPPHQDYTWSFDDIMVFAFSSRQAGIQMFICNREHYGFLPMPLKSHQTLQEETENFVHTLIEAMIDRPPIEPSQYVSVPLKNPDKMGFDEIFMINLKRRKDRRDRMLRTLYEQEIAVKIVEAVDGKALNTSQLKALSIDMLPGYRDPYSSRPLTRGEIGCFLSHYYIWKEVVNRELEKTLVIEDDVRFEHQFKRRLMKLMDDIERAQLDWELIYIGRKRMQVQEPEKAVPNVMNLVEADYSYWTLGYAISFQGAQKLIGAEPFSKMLPVDEFLPVMYNKHPVAKYMEYYESRDLKAFSAEPLLVYPTHYTGQPGYLSDTETSTIWDNETVSTDWDRTHSWKSRQQGKIHSDAQNKDALPSQSSLNAPSSRDEL
SIO_010081: COLGALT2
subclass of: SO_0000673
so part of: COLGALT2
location: join(3737919..3737932,3739429..3739546,3740298..3740432,3744825..3745029,3750085..3750204,3750684..3750760,3752701..3752807,3753633..3753765,3755064..3755191,3755709..3755915,3756349..3756625)
location: region:3737919-3756625:1
so has part: feature:3737919-3737932:1:exon
so has part: feature:3739429-3739546:1:exon
so has part: feature:3740298-3740432:1:exon
so has part: feature:3744825-3745029:1:exon
so has part: feature:3750085-3750204:1:exon
so has part: feature:3750684-3750760:1:exon
so has part: feature:3752701-3752807:1:exon
so has part: feature:3753633-3753765:1:exon
so has part: feature:3755064-3755191:1:exon
so has part: feature:3755709-3755915:1:exon
so has part: feature:3756349-3756625:1:exon

XP_050756724.1
type: Protein
SIO_000068: ncbiprotein

position:3737919:1
position: 3737919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3756625:1
position: 3756625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3737919-3737932:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3739429-3739546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3740298-3740432:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3744825-3745029:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3750085-3750204:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3750684-3750760:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3752701-3752807:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3753633-3753765:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3755064-3755191:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3755709-3755915:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3756349-3756625:1:exon

RGL1
type: Gene
subclass of: SO_0000704
RO_0002162: 33616
gene: RGL1
note: ral guanine nucleotide dissociation stimulator like 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3761998..3844417)
location: region:3761998-3844417:-1
so has part: feature:3761998-3844417:-1:exon
subclass of: SO_0000010

127018939
type: Gene
SIO_000068: ncbigene

position:3761998:-1
position: 3761998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3844417:-1
position: 3844417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3761998-3844417:-1:exon

RGL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: RGL1
product: ral guanine nucleotide dissociation stimulator like 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_050900766.1
SIO_010081: RGL1
subclass of: SO_0000673
so part of: RGL1
location: complement(join(3761998..3764092,3764748..3764862,3766186..3766425,3768406..3768592,3770669..3770758,3771614..3771735,3773234..3773266,3776426..3776515,3779002..3779086,3780250..3780353,3784229..3784444,3785103..3785227,3788546..3788730,3805454..3805531,3816457..3816665,3843254..3843364,3844350..3844417))
location: region:3761998-3844417:-1
so has part: feature:3844350-3844417:-1:exon
so has part: feature:3843254-3843364:-1:exon
so has part: feature:3816457-3816665:-1:exon
so has part: feature:3805454-3805531:-1:exon
so has part: feature:3788546-3788730:-1:exon
so has part: feature:3785103-3785227:-1:exon
so has part: feature:3784229-3784444:-1:exon
so has part: feature:3780250-3780353:-1:exon
so has part: feature:3779002-3779086:-1:exon
so has part: feature:3776426-3776515:-1:exon
so has part: feature:3773234-3773266:-1:exon
so has part: feature:3771614-3771735:-1:exon
so has part: feature:3770669-3770758:-1:exon
so has part: feature:3768406-3768592:-1:exon
so has part: feature:3766186-3766425:-1:exon
so has part: feature:3764748-3764862:-1:exon
so has part: feature:3761998-3764092:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3844350-3844417:-1:exon

position:3844350:-1
position: 3844350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3843254-3843364:-1:exon

position:3843254:-1
position: 3843254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3843364:-1
position: 3843364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3816457-3816665:-1:exon

position:3816457:-1
position: 3816457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3816665:-1
position: 3816665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3805454-3805531:-1:exon

position:3805454:-1
position: 3805454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3805531:-1
position: 3805531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3788546-3788730:-1:exon

position:3788546:-1
position: 3788546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3788730:-1
position: 3788730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3785103-3785227:-1:exon

position:3785103:-1
position: 3785103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3785227:-1
position: 3785227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3784229-3784444:-1:exon

position:3784229:-1
position: 3784229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3784444:-1
position: 3784444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3780250-3780353:-1:exon

position:3780250:-1
position: 3780250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3780353:-1
position: 3780353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3779002-3779086:-1:exon

position:3779002:-1
position: 3779002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3779086:-1
position: 3779086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3776426-3776515:-1:exon

position:3776426:-1
position: 3776426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3776515:-1
position: 3776515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3773234-3773266:-1:exon

position:3773234:-1
position: 3773234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3773266:-1
position: 3773266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3771614-3771735:-1:exon

position:3771614:-1
position: 3771614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3771735:-1
position: 3771735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3770669-3770758:-1:exon

position:3770669:-1
position: 3770669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3770758:-1
position: 3770758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3768406-3768592:-1:exon

position:3768406:-1
position: 3768406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3768592:-1
position: 3768592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3766186-3766425:-1:exon

position:3766186:-1
position: 3766186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3766425:-1
position: 3766425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3764748-3764862:-1:exon

position:3764748:-1
position: 3764748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3764862:-1
position: 3764862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3761998-3764092:-1:exon

position:3764092:-1
position: 3764092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RGL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: RGL1
product: ral guanine nucleotide dissociation stimulator like 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_050900765.1
SIO_010081: RGL1
subclass of: SO_0000673
so part of: RGL1
location: complement(join(3761998..3764092,3764748..3764862,3766186..3766425,3768406..3768592,3770669..3770758,3771614..3771735,3773234..3773266,3774452..3774538,3776426..3776515,3779002..3779086,3780250..3780353,3784229..3784444,3785103..3785227,3788546..3788730,3805454..3805531,3816457..3816665,3843254..3843364,3844350..3844417))
location: region:3761998-3844417:-1
so has part: feature:3844350-3844417:-1:exon
so has part: feature:3843254-3843364:-1:exon
so has part: feature:3816457-3816665:-1:exon
so has part: feature:3805454-3805531:-1:exon
so has part: feature:3788546-3788730:-1:exon
so has part: feature:3785103-3785227:-1:exon
so has part: feature:3784229-3784444:-1:exon
so has part: feature:3780250-3780353:-1:exon
so has part: feature:3779002-3779086:-1:exon
so has part: feature:3776426-3776515:-1:exon
so has part: feature:3774452-3774538:-1:exon
so has part: feature:3773234-3773266:-1:exon
so has part: feature:3771614-3771735:-1:exon
so has part: feature:3770669-3770758:-1:exon
so has part: feature:3768406-3768592:-1:exon
so has part: feature:3766186-3766425:-1:exon
so has part: feature:3764748-3764862:-1:exon
so has part: feature:3761998-3764092:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3844350-3844417:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3843254-3843364:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3816457-3816665:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3805454-3805531:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3788546-3788730:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3785103-3785227:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3784229-3784444:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3780250-3780353:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3779002-3779086:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3776426-3776515:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3774452-3774538:-1:exon

position:3774452:-1
position: 3774452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3774538:-1
position: 3774538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3773234-3773266:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3771614-3771735:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3770669-3770758:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3768406-3768592:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3766186-3766425:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3764748-3764862:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3761998-3764092:-1:exon

RGL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: RGL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ral guanine nucleotide dissociation stimulator-like 1 isoform X2
translation: MKLLWKAKMSTIQDWGEEVEEGAVYNVTLKRVQIQQAANKGARWLGAEGDQLPPEHTVSQYETCKIRTIKAGTLEKLVENLLTAFGDNDFTYISIFLSTYRAFASTKEVLELLLDRYGNLETSSCEEVGSQNSSESKTVLRIAIASILRAWLDQCSEDFREPPNYPSLLKLLDYLKRNIPGSDPERRAQNLLEQFQNQEVETNDGVHNTSPCNPHDEEEVESGSPEEFSFFQEDVVAEQLTYMDAILFKKVVPHHCLGCIWSRRDKKENKHLAPTIRATISQFNVVTKCVVSTILKSKELKTQQRAKIIEKWIHIAHECRILKNFSSLRAIISALQSNSIYRLKKTWACVPKDIMLMFEELSDIFSDHDNYLTSRELLMKEGTSKFANLDSSVKENQKRTQRRLQLQKDMGGLINFEKRRREFEVIAQIKLLQSACNSYCMIPDQKFIQWFRRQEHLTEEESYNLSREVEAAADTSTTSPKSRKSMVKRFSLLFLGSEVIAHSTPIKEQPKSAPGGSSGESTDSASVSSCEFNHSESEEVCVTPIDTPDESQKKLPESSCSSSSSAHSTEASSSGVSSFVSSPPLLSSNDKCSVSVTPITSKVLPPVYNQQNKDMCIIRISIEDDNGNMYKSILLTSQDKTPAVIQRAMLKHNLECDAAEDYELVQVISEDKELVMPGNANVFYAMNSHVNFDFILRKKASVNGPVKMRGRCSLTLSRTAKRGCRSNRPSKITV
SIO_010081: RGL1
subclass of: SO_0000673
so part of: RGL1
location: complement(join(3763905..3764092,3764748..3764862,3766186..3766425,3768406..3768592,3770669..3770758,3771614..3771735,3773234..3773266,3776426..3776515,3779002..3779086,3780250..3780353,3784229..3784444,3785103..3785227,3788546..3788730,3805454..3805531,3816457..3816665,3843254..3843364,3844350..3844376))
location: region:3763905-3844376:-1
so has part: feature:3844350-3844376:-1:exon
so has part: feature:3843254-3843364:-1:exon
so has part: feature:3816457-3816665:-1:exon
so has part: feature:3805454-3805531:-1:exon
so has part: feature:3788546-3788730:-1:exon
so has part: feature:3785103-3785227:-1:exon
so has part: feature:3784229-3784444:-1:exon
so has part: feature:3780250-3780353:-1:exon
so has part: feature:3779002-3779086:-1:exon
so has part: feature:3776426-3776515:-1:exon
so has part: feature:3773234-3773266:-1:exon
so has part: feature:3771614-3771735:-1:exon
so has part: feature:3770669-3770758:-1:exon
so has part: feature:3768406-3768592:-1:exon
so has part: feature:3766186-3766425:-1:exon
so has part: feature:3764748-3764862:-1:exon
so has part: feature:3763905-3764092:-1:exon

XP_050756723.1
type: Protein
SIO_000068: ncbiprotein

position:3763905:-1
position: 3763905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3844376:-1
position: 3844376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3844350-3844376:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3843254-3843364:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3816457-3816665:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3805454-3805531:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3788546-3788730:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3785103-3785227:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3784229-3784444:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3780250-3780353:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3779002-3779086:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3776426-3776515:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3773234-3773266:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3771614-3771735:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3770669-3770758:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3768406-3768592:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3766186-3766425:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3764748-3764862:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3763905-3764092:-1:exon

RGL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: RGL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ral guanine nucleotide dissociation stimulator-like 1 isoform X1
translation: MKLLWKAKMSTIQDWGEEVEEGAVYNVTLKRVQIQQAANKGARWLGAEGDQLPPEHTVSQYETCKIRTIKAGTLEKLVENLLTAFGDNDFTYISIFLSTYRAFASTKEVLELLLDRYGNLETSSCEEVGSQNSSESKTVLRIAIASILRAWLDQCSEDFREPPNYPSLLKLLDYLKRNIPGSDPERRAQNLLEQFQNQEVETNDGVHNTSPCNPHDEEEVESGSPEEFSFFQEDVVAEQLTYMDAILFKKVVPHHCLGCIWSRRDKKENKHLAPTIRATISQFNVVTKCVVSTILKSKELKTQQRAKIIEKWIHIAHECRILKNFSSLRAIISALQSNSIYRLKKTWACVPKDIMLMFEELSDIFSDHDNYLTSRELLMKEGTSKFANLDSSVKENQKRTQRRLQLQKDMGVMQGTVPYLGTFLTDLIMLDTALQDYIEGGLINFEKRRREFEVIAQIKLLQSACNSYCMIPDQKFIQWFRRQEHLTEEESYNLSREVEAAADTSTTSPKSRKSMVKRFSLLFLGSEVIAHSTPIKEQPKSAPGGSSGESTDSASVSSCEFNHSESEEVCVTPIDTPDESQKKLPESSCSSSSSAHSTEASSSGVSSFVSSPPLLSSNDKCSVSVTPITSKVLPPVYNQQNKDMCIIRISIEDDNGNMYKSILLTSQDKTPAVIQRAMLKHNLECDAAEDYELVQVISEDKELVMPGNANVFYAMNSHVNFDFILRKKASVNGPVKMRGRCSLTLSRTAKRGCRSNRPSKITV
SIO_010081: RGL1
subclass of: SO_0000673
so part of: RGL1
location: complement(join(3763905..3764092,3764748..3764862,3766186..3766425,3768406..3768592,3770669..3770758,3771614..3771735,3773234..3773266,3774452..3774538,3776426..3776515,3779002..3779086,3780250..3780353,3784229..3784444,3785103..3785227,3788546..3788730,3805454..3805531,3816457..3816665,3843254..3843364,3844350..3844376))
location: region:3763905-3844376:-1
so has part: feature:3844350-3844376:-1:exon
so has part: feature:3843254-3843364:-1:exon
so has part: feature:3816457-3816665:-1:exon
so has part: feature:3805454-3805531:-1:exon
so has part: feature:3788546-3788730:-1:exon
so has part: feature:3785103-3785227:-1:exon
so has part: feature:3784229-3784444:-1:exon
so has part: feature:3780250-3780353:-1:exon
so has part: feature:3779002-3779086:-1:exon
so has part: feature:3776426-3776515:-1:exon
so has part: feature:3774452-3774538:-1:exon
so has part: feature:3773234-3773266:-1:exon
so has part: feature:3771614-3771735:-1:exon
so has part: feature:3770669-3770758:-1:exon
so has part: feature:3768406-3768592:-1:exon
so has part: feature:3766186-3766425:-1:exon
so has part: feature:3764748-3764862:-1:exon
so has part: feature:3763905-3764092:-1:exon

XP_050756722.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3844350-3844376:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3843254-3843364:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3816457-3816665:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3805454-3805531:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3788546-3788730:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3785103-3785227:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3784229-3784444:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3780250-3780353:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3779002-3779086:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3776426-3776515:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3774452-3774538:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3773234-3773266:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3771614-3771735:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3770669-3770758:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3768406-3768592:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3766186-3766425:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3764748-3764862:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3763905-3764092:-1:exon

APOBEC4
type: Gene
subclass of: SO_0000704
RO_0002162: 33616
gene: APOBEC4
note: apolipoprotein B mRNA editing enzyme catalytic polypeptide like 4; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3879898..3880869
location: region:3879898-3880869:1
so has part: feature:3879898-3880869:1:exon
subclass of: SO_0000010

127019372
type: Gene
SIO_000068: ncbigene

position:3879898:1
position: 3879898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3880869:1
position: 3880869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3879898-3880869:1:exon

APOBEC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: APOBEC4
product: apolipoprotein B mRNA editing enzyme catalytic polypeptide like 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
transcript id: XM_050901380.1
SIO_010081: APOBEC4
subclass of: SO_0000673
so part of: APOBEC4
location: 3879898..3880869
location: region:3879898-3880869:1
so has part: feature:3879898-3880869:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3879898-3880869:1:exon

APOBEC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: APOBEC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative C->U-editing enzyme APOBEC-4
translation: MNPGEKTIFQEYLTNQGTVVKPYCWQRQNHICAKCPYHIRTGEEARVPYAEFHRVFGFPYRSTATLRSKHLLFYELRSFSGRVVQKGHATNCTDQDKHPESMLFEVGGYLDAVTGAYENMGCIILYSNYSPCNEAYHCCVSKIYNFLLKYPEITLCIYFSQLYHTEDGFPAVAWNREALRSLSSLWPRVTLQRLPGGAQRYLLCNFVYGIPGSTLYHPTPPSRTLADRQNPYQINNLTGMKPYFRKAFSQAMQGKPAVQQNLKAFSSPSPASQQPFQAMKGSLLPPMSQSPLLLFPGMFLPFQREHLYPRPKNIVRHLKMPKE
SIO_010081: APOBEC4
subclass of: SO_0000673
so part of: APOBEC4
location: 3879898..3880869
location: region:3879898-3880869:1
so has part: feature:3879898-3880869:1:exon

XP_050757337.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3879898-3880869:1:exon

ARPC5
type: Gene
subclass of: SO_0000704
RO_0002162: 33616
gene: ARPC5
note: actin related protein 2/3 complex subunit 5; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3882671..3887480
location: region:3882671-3887480:1
so has part: feature:3882671-3887480:1:exon
subclass of: SO_0000010

127019330
type: Gene
SIO_000068: ncbigene

position:3882671:1
position: 3882671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3887480:1
position: 3887480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3882671-3887480:1:exon

ARPC5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: ARPC5
product: actin related protein 2/3 complex subunit 5, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_050901329.1
SIO_010081: ARPC5
subclass of: SO_0000673
so part of: ARPC5
location: join(3882671..3882820,3883635..3883717,3885506..3885682,3886203..3887480)
location: region:3882671-3887480:1
so has part: feature:3882671-3882820:1:exon
so has part: feature:3883635-3883717:1:exon
so has part: feature:3885506-3885682:1:exon
so has part: feature:3886203-3887480:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3882671-3882820:1:exon

position:3882820:1
position: 3882820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3883635-3883717:1:exon

position:3883635:1
position: 3883635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3883717:1
position: 3883717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3885506-3885682:1:exon

position:3885506:1
position: 3885506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3885682:1
position: 3885682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3886203-3887480:1:exon

position:3886203:1
position: 3886203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ARPC5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: ARPC5
product: actin related protein 2/3 complex subunit 5, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_050901328.1
SIO_010081: ARPC5
subclass of: SO_0000673
so part of: ARPC5
location: join(3882671..3882818,3883645..3883717,3885506..3885682,3886203..3887480)
location: region:3882671-3887480:1
so has part: feature:3882671-3882818:1:exon
so has part: feature:3883645-3883717:1:exon
so has part: feature:3885506-3885682:1:exon
so has part: feature:3886203-3887480:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3882671-3882818:1:exon

position:3882818:1
position: 3882818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3883645-3883717:1:exon

position:3883645:1
position: 3883645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3885506-3885682:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3886203-3887480:1:exon

ARPC5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: ARPC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin-related protein 2/3 complex subunit 5 isoform X2
translation: MAKHTVSSARFRRVDVDEYDENKFVDEEEGGDGQAGPDEGEVDSCLRQSSGTGNMMAALQAALKNPPINTKNQAVKDRAESIVLKVLISFKANDIEKAVQALDKNGVDLLMKYIYKGFESPSDNSSAVLLQWHEKALAAGGVGSIVRVLTARKTV
SIO_010081: ARPC5
subclass of: SO_0000673
so part of: ARPC5
location: join(3882676..3882820,3883635..3883717,3885506..3885682,3886203..3886265)
location: region:3882676-3886265:1
so has part: feature:3882676-3882820:1:exon
so has part: feature:3883635-3883717:1:exon
so has part: feature:3885506-3885682:1:exon
so has part: feature:3886203-3886265:1:exon

XP_050757286.1
type: Protein
SIO_000068: ncbiprotein

position:3882676:1
position: 3882676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3886265:1
position: 3886265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3882676-3882820:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3883635-3883717:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3885506-3885682:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3886203-3886265:1:exon

ARPC5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: ARPC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin-related protein 2/3 complex subunit 5 isoform X1
translation: MAKHTVSSARFRRVDVDEYDENKFVDEEEGGDGQAGPDEGEVDSCLRQGNMMAALQAALKNPPINTKNQAVKDRAESIVLKVLISFKANDIEKAVQALDKNGVDLLMKYIYKGFESPSDNSSAVLLQWHEKALAAGGVGSIVRVLTARKTV
SIO_010081: ARPC5
subclass of: SO_0000673
so part of: ARPC5
location: join(3882676..3882818,3883645..3883717,3885506..3885682,3886203..3886265)
location: region:3882676-3886265:1
so has part: feature:3882676-3882818:1:exon
so has part: feature:3883645-3883717:1:exon
so has part: feature:3885506-3885682:1:exon
so has part: feature:3886203-3886265:1:exon

XP_050757285.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3882676-3882818:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3883645-3883717:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3885506-3885682:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3886203-3886265:1:exon

NCF2
type: Gene
subclass of: SO_0000704
RO_0002162: 33616
gene: NCF2
note: neutrophil cytosolic factor 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3892213..3903216
location: region:3892213-3903216:1
so has part: feature:3892213-3903216:1:exon
subclass of: SO_0000010

127019133
type: Gene
SIO_000068: ncbigene

position:3892213:1
position: 3892213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3903216:1
position: 3903216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3892213-3903216:1:exon

NCF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: NCF2
product: neutrophil cytosolic factor 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
transcript id: XM_050901065.1
SIO_010081: NCF2
subclass of: SO_0000673
so part of: NCF2
location: join(3892213..3892393,3892883..3892965,3893299..3893407,3893630..3893764,3894139..3894246,3895258..3895317,3896495..3896538,3896755..3896896,3897204..3897266,3897656..3897763,3900217..3900365,3900446..3900557,3900806..3900968,3902997..3903216)
location: region:3892213-3903216:1
so has part: feature:3892213-3892393:1:exon
so has part: feature:3892883-3892965:1:exon
so has part: feature:3893299-3893407:1:exon
so has part: feature:3893630-3893764:1:exon
so has part: feature:3894139-3894246:1:exon
so has part: feature:3895258-3895317:1:exon
so has part: feature:3896495-3896538:1:exon
so has part: feature:3896755-3896896:1:exon
so has part: feature:3897204-3897266:1:exon
so has part: feature:3897656-3897763:1:exon
so has part: feature:3900217-3900365:1:exon
so has part: feature:3900446-3900557:1:exon
so has part: feature:3900806-3900968:1:exon
so has part: feature:3902997-3903216:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3892213-3892393:1:exon

position:3892393:1
position: 3892393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3892883-3892965:1:exon

position:3892883:1
position: 3892883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3892965:1
position: 3892965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3893299-3893407:1:exon

position:3893299:1
position: 3893299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3893407:1
position: 3893407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3893630-3893764:1:exon

position:3893630:1
position: 3893630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3893764:1
position: 3893764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3894139-3894246:1:exon

position:3894139:1
position: 3894139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3894246:1
position: 3894246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3895258-3895317:1:exon

position:3895258:1
position: 3895258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3895317:1
position: 3895317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3896495-3896538:1:exon

position:3896495:1
position: 3896495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3896538:1
position: 3896538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3896755-3896896:1:exon

position:3896755:1
position: 3896755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3896896:1
position: 3896896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3897204-3897266:1:exon

position:3897204:1
position: 3897204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3897266:1
position: 3897266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3897656-3897763:1:exon

position:3897656:1
position: 3897656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3897763:1
position: 3897763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3900217-3900365:1:exon

position:3900217:1
position: 3900217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3900365:1
position: 3900365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3900446-3900557:1:exon

position:3900446:1
position: 3900446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3900557:1
position: 3900557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3900806-3900968:1:exon

position:3900806:1
position: 3900806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3900968:1
position: 3900968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3902997-3903216:1:exon

position:3902997:1
position: 3902997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NCF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: NCF2
product: neutrophil cytosolic factor 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
transcript id: XM_050901064.1
SIO_010081: NCF2
subclass of: SO_0000673
so part of: NCF2
location: join(3892213..3892393,3892883..3892965,3893299..3893407,3893630..3893764,3894139..3894246,3895258..3895317,3896495..3896538,3896755..3896896,3897204..3897266,3897656..3897734,3899442..3899485,3900214..3900365,3900446..3900557,3900806..3900968,3902997..3903216)
location: region:3892213-3903216:1
so has part: feature:3892213-3892393:1:exon
so has part: feature:3892883-3892965:1:exon
so has part: feature:3893299-3893407:1:exon
so has part: feature:3893630-3893764:1:exon
so has part: feature:3894139-3894246:1:exon
so has part: feature:3895258-3895317:1:exon
so has part: feature:3896495-3896538:1:exon
so has part: feature:3896755-3896896:1:exon
so has part: feature:3897204-3897266:1:exon
so has part: feature:3897656-3897734:1:exon
so has part: feature:3899442-3899485:1:exon
so has part: feature:3900214-3900365:1:exon
so has part: feature:3900446-3900557:1:exon
so has part: feature:3900806-3900968:1:exon
so has part: feature:3902997-3903216:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3892213-3892393:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3892883-3892965:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3893299-3893407:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3893630-3893764:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3894139-3894246:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3895258-3895317:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3896495-3896538:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3896755-3896896:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3897204-3897266:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3897656-3897734:1:exon

position:3897734:1
position: 3897734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3899442-3899485:1:exon

position:3899442:1
position: 3899442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3899485:1
position: 3899485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3900214-3900365:1:exon

position:3900214:1
position: 3900214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3900446-3900557:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3900806-3900968:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3902997-3903216:1:exon

NCF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: NCF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neutrophil cytosol factor 2 isoform X2
translation: MSLVETIRLWQEGVCAADGKGWRAALDAFTAVQNPSAKICFNIGCIHLVLGKLAEAEEAFTRSIGCDKHLAVAYFQRGTVFYRRQNHEKAIKDFKEALAQLRGNQLIDYKILGLRYRLFACEILYNIALVYATMEDWKKAEEHLTLAVSMKSEPQHKKIDRAMEAILKQKLYELVAVPAGKLFRPNEKQVAQLEKKDYLGKATVVASVVDKDDFSGFAPLQPQASGPPPRPKTPEILRALKGQPHRVLYEFIPETAEELQVLPGNIVFVLKKEKDNWATVMFNGKKGIVPCNYLEPMELQNKMHIQEETLLEDEIPESPTSTAPEKPRRPAPGQGRGAEGTGAEAAVSSPRVLKVHYKYTVALQVEPGLSYTELLDLVCKKLELQPEHMQLRYKPAESQALVTLSAVNLEAAWSQSKDNCLTVWCDITEGEGFLPDSKPEESPREATPEETGPTQVVAQYSYEATQPEDLEFQAGDVILVLSKVNEDWLEGQCNGKIGIFPSAFVQKSNTKDPEI
SIO_010081: NCF2
subclass of: SO_0000673
so part of: NCF2
location: join(3892220..3892393,3892883..3892965,3893299..3893407,3893630..3893764,3894139..3894246,3895258..3895317,3896495..3896538,3896755..3896896,3897204..3897266,3897656..3897763,3900217..3900365,3900446..3900557,3900806..3900968,3902997..3903094)
location: region:3892220-3903094:1
so has part: feature:3892220-3892393:1:exon
so has part: feature:3892883-3892965:1:exon
so has part: feature:3893299-3893407:1:exon
so has part: feature:3893630-3893764:1:exon
so has part: feature:3894139-3894246:1:exon
so has part: feature:3895258-3895317:1:exon
so has part: feature:3896495-3896538:1:exon
so has part: feature:3896755-3896896:1:exon
so has part: feature:3897204-3897266:1:exon
so has part: feature:3897656-3897763:1:exon
so has part: feature:3900217-3900365:1:exon
so has part: feature:3900446-3900557:1:exon
so has part: feature:3900806-3900968:1:exon
so has part: feature:3902997-3903094:1:exon

XP_050757022.1
type: Protein
SIO_000068: ncbiprotein

position:3892220:1
position: 3892220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3903094:1
position: 3903094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3892220-3892393:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3892883-3892965:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3893299-3893407:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3893630-3893764:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3894139-3894246:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3895258-3895317:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3896495-3896538:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3896755-3896896:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3897204-3897266:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3897656-3897763:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3900217-3900365:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3900446-3900557:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3900806-3900968:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3902997-3903094:1:exon

NCF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: NCF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neutrophil cytosol factor 2 isoform X1
translation: MSLVETIRLWQEGVCAADGKGWRAALDAFTAVQNPSAKICFNIGCIHLVLGKLAEAEEAFTRSIGCDKHLAVAYFQRGTVFYRRQNHEKAIKDFKEALAQLRGNQLIDYKILGLRYRLFACEILYNIALVYATMEDWKKAEEHLTLAVSMKSEPQHKKIDRAMEAILKQKLYELVAVPAGKLFRPNEKQVAQLEKKDYLGKATVVASVVDKDDFSGFAPLQPQASGPPPRPKTPEILRALKGQPHRVLYEFIPETAEELQVLPGNIVFVLKKEKDNWATVMFNGKKGIVPCNYLEPMELQNKMHIQEETLLEDEIPESPTSTAPEKPRRPAPDYAPPTLTQPRDTAKEAEAAVSSPRVLKVHYKYTVALQVEPGLSYTELLDLVCKKLELQPEHMQLRYKPAESQALVTLSAVNLEAAWSQSKDNCLTVWCDITEGEGFLPDSKPEESPREATPEETGPTQVVAQYSYEATQPEDLEFQAGDVILVLSKVNEDWLEGQCNGKIGIFPSAFVQKSNTKDPEI
SIO_010081: NCF2
subclass of: SO_0000673
so part of: NCF2
location: join(3892220..3892393,3892883..3892965,3893299..3893407,3893630..3893764,3894139..3894246,3895258..3895317,3896495..3896538,3896755..3896896,3897204..3897266,3897656..3897734,3899442..3899485,3900214..3900365,3900446..3900557,3900806..3900968,3902997..3903094)
location: region:3892220-3903094:1
so has part: feature:3892220-3892393:1:exon
so has part: feature:3892883-3892965:1:exon
so has part: feature:3893299-3893407:1:exon
so has part: feature:3893630-3893764:1:exon
so has part: feature:3894139-3894246:1:exon
so has part: feature:3895258-3895317:1:exon
so has part: feature:3896495-3896538:1:exon
so has part: feature:3896755-3896896:1:exon
so has part: feature:3897204-3897266:1:exon
so has part: feature:3897656-3897734:1:exon
so has part: feature:3899442-3899485:1:exon
so has part: feature:3900214-3900365:1:exon
so has part: feature:3900446-3900557:1:exon
so has part: feature:3900806-3900968:1:exon
so has part: feature:3902997-3903094:1:exon

XP_050757021.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3892220-3892393:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3892883-3892965:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3893299-3893407:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3893630-3893764:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3894139-3894246:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3895258-3895317:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3896495-3896538:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3896755-3896896:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3897204-3897266:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3897656-3897734:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3899442-3899485:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3900214-3900365:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3900446-3900557:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3900806-3900968:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3902997-3903094:1:exon

SMG7
type: Gene
subclass of: SO_0000704
RO_0002162: 33616
gene: SMG7
note: SMG7 nonsense mediated mRNA decay factor; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3904591..3961481)
location: region:3904591-3961481:-1
so has part: feature:3904591-3961481:-1:exon
subclass of: SO_0000010

127018857
type: Gene
SIO_000068: ncbigene

position:3904591:-1
position: 3904591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3961481:-1
position: 3961481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3904591-3961481:-1:exon

SMG7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: SMG7
product: SMG7 nonsense mediated mRNA decay factor, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_050900618.1
SIO_010081: SMG7
subclass of: SO_0000673
so part of: SMG7
location: complement(join(3904591..3906738,3907256..3907407,3907496..3907666,3909013..3909172,3909786..3909866,3912024..3912173,3913716..3914081,3914838..3915226,3916488..3916632,3920388..3920823,3921070..3921189,3921860..3921920,3922256..3922326,3925257..3925413,3926529..3926691,3929404..3929539,3929889..3930039,3931099..3931170,3932025..3932196,3935534..3935666,3936654..3936771,3938068..3938099,3961275..3961481))
location: region:3904591-3961481:-1
so has part: feature:3961275-3961481:-1:exon
so has part: feature:3938068-3938099:-1:exon
so has part: feature:3936654-3936771:-1:exon
so has part: feature:3935534-3935666:-1:exon
so has part: feature:3932025-3932196:-1:exon
so has part: feature:3931099-3931170:-1:exon
so has part: feature:3929889-3930039:-1:exon
so has part: feature:3929404-3929539:-1:exon
so has part: feature:3926529-3926691:-1:exon
so has part: feature:3925257-3925413:-1:exon
so has part: feature:3922256-3922326:-1:exon
so has part: feature:3921860-3921920:-1:exon
so has part: feature:3921070-3921189:-1:exon
so has part: feature:3920388-3920823:-1:exon
so has part: feature:3916488-3916632:-1:exon
so has part: feature:3914838-3915226:-1:exon
so has part: feature:3913716-3914081:-1:exon
so has part: feature:3912024-3912173:-1:exon
so has part: feature:3909786-3909866:-1:exon
so has part: feature:3909013-3909172:-1:exon
so has part: feature:3907496-3907666:-1:exon
so has part: feature:3907256-3907407:-1:exon
so has part: feature:3904591-3906738:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3961275-3961481:-1:exon

position:3961275:-1
position: 3961275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3938068-3938099:-1:exon

position:3938068:-1
position: 3938068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3938099:-1
position: 3938099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3936654-3936771:-1:exon

position:3936654:-1
position: 3936654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3936771:-1
position: 3936771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3935534-3935666:-1:exon

position:3935534:-1
position: 3935534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3935666:-1
position: 3935666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3932025-3932196:-1:exon

position:3932025:-1
position: 3932025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3932196:-1
position: 3932196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3931099-3931170:-1:exon

position:3931099:-1
position: 3931099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3931170:-1
position: 3931170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3929889-3930039:-1:exon

position:3929889:-1
position: 3929889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3930039:-1
position: 3930039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3929404-3929539:-1:exon

position:3929404:-1
position: 3929404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3929539:-1
position: 3929539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3926529-3926691:-1:exon

position:3926529:-1
position: 3926529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3926691:-1
position: 3926691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3925257-3925413:-1:exon

position:3925257:-1
position: 3925257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3925413:-1
position: 3925413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3922256-3922326:-1:exon

position:3922256:-1
position: 3922256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3922326:-1
position: 3922326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3921860-3921920:-1:exon

position:3921860:-1
position: 3921860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3921920:-1
position: 3921920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3921070-3921189:-1:exon

position:3921070:-1
position: 3921070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3921189:-1
position: 3921189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3920388-3920823:-1:exon

position:3920388:-1
position: 3920388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3920823:-1
position: 3920823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3916488-3916632:-1:exon

position:3916488:-1
position: 3916488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3916632:-1
position: 3916632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3914838-3915226:-1:exon

position:3914838:-1
position: 3914838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3915226:-1
position: 3915226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3913716-3914081:-1:exon

position:3913716:-1
position: 3913716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3914081:-1
position: 3914081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3912024-3912173:-1:exon

position:3912024:-1
position: 3912024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3912173:-1
position: 3912173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3909786-3909866:-1:exon

position:3909786:-1
position: 3909786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3909866:-1
position: 3909866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3909013-3909172:-1:exon

position:3909013:-1
position: 3909013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3909172:-1
position: 3909172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3907496-3907666:-1:exon

position:3907496:-1
position: 3907496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3907666:-1
position: 3907666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3907256-3907407:-1:exon

position:3907256:-1
position: 3907256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3907407:-1
position: 3907407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3904591-3906738:-1:exon

position:3906738:-1
position: 3906738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SMG7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: SMG7
product: SMG7 nonsense mediated mRNA decay factor, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_050900620.1
SIO_010081: SMG7
subclass of: SO_0000673
so part of: SMG7
location: complement(join(3904591..3906738,3907256..3907407,3907496..3907666,3909013..3909172,3909786..3909866,3913716..3914081,3914838..3915226,3916488..3916632,3920388..3920823,3921070..3921189,3921860..3921920,3922256..3922326,3925260..3925413,3926529..3926691,3929404..3929539,3929889..3930039,3931099..3931170,3932025..3932196,3935534..3935666,3936654..3936771,3938068..3938099,3952775..3952926,3954404..3954416))
location: region:3904591-3954416:-1
so has part: feature:3954404-3954416:-1:exon
so has part: feature:3952775-3952926:-1:exon
so has part: feature:3938068-3938099:-1:exon
so has part: feature:3936654-3936771:-1:exon
so has part: feature:3935534-3935666:-1:exon
so has part: feature:3932025-3932196:-1:exon
so has part: feature:3931099-3931170:-1:exon
so has part: feature:3929889-3930039:-1:exon
so has part: feature:3929404-3929539:-1:exon
so has part: feature:3926529-3926691:-1:exon
so has part: feature:3925260-3925413:-1:exon
so has part: feature:3922256-3922326:-1:exon
so has part: feature:3921860-3921920:-1:exon
so has part: feature:3921070-3921189:-1:exon
so has part: feature:3920388-3920823:-1:exon
so has part: feature:3916488-3916632:-1:exon
so has part: feature:3914838-3915226:-1:exon
so has part: feature:3913716-3914081:-1:exon
so has part: feature:3909786-3909866:-1:exon
so has part: feature:3909013-3909172:-1:exon
so has part: feature:3907496-3907666:-1:exon
so has part: feature:3907256-3907407:-1:exon
so has part: feature:3904591-3906738:-1:exon

position:3954416:-1
position: 3954416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3954404-3954416:-1:exon

position:3954404:-1
position: 3954404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3952775-3952926:-1:exon

position:3952775:-1
position: 3952775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3952926:-1
position: 3952926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3938068-3938099:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3936654-3936771:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3935534-3935666:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3932025-3932196:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3931099-3931170:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3929889-3930039:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3929404-3929539:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3926529-3926691:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3925260-3925413:-1:exon

position:3925260:-1
position: 3925260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3922256-3922326:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3921860-3921920:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3921070-3921189:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3920388-3920823:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3916488-3916632:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3914838-3915226:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3913716-3914081:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3909786-3909866:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3909013-3909172:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3907496-3907666:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3907256-3907407:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3904591-3906738:-1:exon

SMG7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: SMG7
product: SMG7 nonsense mediated mRNA decay factor, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_050900621.1
SIO_010081: SMG7
subclass of: SO_0000673
so part of: SMG7
location: complement(join(3904591..3906738,3907256..3907407,3907496..3907666,3909013..3909172,3909786..3909866,3913716..3914081,3914838..3914968,3915086..3915226,3916488..3916632,3920388..3920823,3921070..3921189,3921860..3921920,3922256..3922326,3925257..3925413,3926529..3926691,3929404..3929539,3929889..3930039,3931099..3931170,3932025..3932196,3935534..3935666,3936654..3936771,3938068..3938099,3952775..3952926,3954404..3954416))
location: region:3904591-3954416:-1
so has part: feature:3954404-3954416:-1:exon
so has part: feature:3952775-3952926:-1:exon
so has part: feature:3938068-3938099:-1:exon
so has part: feature:3936654-3936771:-1:exon
so has part: feature:3935534-3935666:-1:exon
so has part: feature:3932025-3932196:-1:exon
so has part: feature:3931099-3931170:-1:exon
so has part: feature:3929889-3930039:-1:exon
so has part: feature:3929404-3929539:-1:exon
so has part: feature:3926529-3926691:-1:exon
so has part: feature:3925257-3925413:-1:exon
so has part: feature:3922256-3922326:-1:exon
so has part: feature:3921860-3921920:-1:exon
so has part: feature:3921070-3921189:-1:exon
so has part: feature:3920388-3920823:-1:exon
so has part: feature:3916488-3916632:-1:exon
so has part: feature:3915086-3915226:-1:exon
so has part: feature:3914838-3914968:-1:exon
so has part: feature:3913716-3914081:-1:exon
so has part: feature:3909786-3909866:-1:exon
so has part: feature:3909013-3909172:-1:exon
so has part: feature:3907496-3907666:-1:exon
so has part: feature:3907256-3907407:-1:exon
so has part: feature:3904591-3906738:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3954404-3954416:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3952775-3952926:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3938068-3938099:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3936654-3936771:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3935534-3935666:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3932025-3932196:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3931099-3931170:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3929889-3930039:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3929404-3929539:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3926529-3926691:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3925257-3925413:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3922256-3922326:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3921860-3921920:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3921070-3921189:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3920388-3920823:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3916488-3916632:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3915086-3915226:-1:exon

position:3915086:-1
position: 3915086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3914838-3914968:-1:exon

position:3914968:-1
position: 3914968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3913716-3914081:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3909786-3909866:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3909013-3909172:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3907496-3907666:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3907256-3907407:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3904591-3906738:-1:exon

SMG7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: SMG7
product: SMG7 nonsense mediated mRNA decay factor, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_050900619.1
SIO_010081: SMG7
subclass of: SO_0000673
so part of: SMG7
location: complement(join(3904591..3906738,3907256..3907407,3907496..3907666,3909013..3909172,3909786..3909866,3913716..3914081,3914838..3915226,3916488..3916632,3920388..3920823,3921070..3921189,3921860..3921920,3922256..3922326,3925257..3925413,3926529..3926691,3929404..3929539,3929889..3930039,3931099..3931170,3932025..3932196,3935534..3935666,3936654..3936771,3938068..3938099,3952775..3952926,3954404..3954416))
location: region:3904591-3954416:-1
so has part: feature:3954404-3954416:-1:exon
so has part: feature:3952775-3952926:-1:exon
so has part: feature:3938068-3938099:-1:exon
so has part: feature:3936654-3936771:-1:exon
so has part: feature:3935534-3935666:-1:exon
so has part: feature:3932025-3932196:-1:exon
so has part: feature:3931099-3931170:-1:exon
so has part: feature:3929889-3930039:-1:exon
so has part: feature:3929404-3929539:-1:exon
so has part: feature:3926529-3926691:-1:exon
so has part: feature:3925257-3925413:-1:exon
so has part: feature:3922256-3922326:-1:exon
so has part: feature:3921860-3921920:-1:exon
so has part: feature:3921070-3921189:-1:exon
so has part: feature:3920388-3920823:-1:exon
so has part: feature:3916488-3916632:-1:exon
so has part: feature:3914838-3915226:-1:exon
so has part: feature:3913716-3914081:-1:exon
so has part: feature:3909786-3909866:-1:exon
so has part: feature:3909013-3909172:-1:exon
so has part: feature:3907496-3907666:-1:exon
so has part: feature:3907256-3907407:-1:exon
so has part: feature:3904591-3906738:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3954404-3954416:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3952775-3952926:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3938068-3938099:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3936654-3936771:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3935534-3935666:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3932025-3932196:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3931099-3931170:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3929889-3930039:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3929404-3929539:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3926529-3926691:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3925257-3925413:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3922256-3922326:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3921860-3921920:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3921070-3921189:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3920388-3920823:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3916488-3916632:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3914838-3915226:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3913716-3914081:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3909786-3909866:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3909013-3909172:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3907496-3907666:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3907256-3907407:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3904591-3906738:-1:exon

SMG7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: SMG7
product: SMG7 nonsense mediated mRNA decay factor, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_050900617.1
SIO_010081: SMG7
subclass of: SO_0000673
so part of: SMG7
location: complement(join(3904591..3906738,3907256..3907407,3907496..3907666,3909013..3909172,3909786..3909866,3912024..3912173,3913716..3914081,3914838..3915226,3916488..3916632,3920388..3920823,3921070..3921189,3921860..3921920,3922256..3922326,3925257..3925413,3926529..3926691,3929404..3929539,3929889..3930039,3931099..3931170,3932025..3932196,3935534..3935666,3936654..3936771,3938068..3938099,3952775..3952926,3954404..3954416))
location: region:3904591-3954416:-1
so has part: feature:3954404-3954416:-1:exon
so has part: feature:3952775-3952926:-1:exon
so has part: feature:3938068-3938099:-1:exon
so has part: feature:3936654-3936771:-1:exon
so has part: feature:3935534-3935666:-1:exon
so has part: feature:3932025-3932196:-1:exon
so has part: feature:3931099-3931170:-1:exon
so has part: feature:3929889-3930039:-1:exon
so has part: feature:3929404-3929539:-1:exon
so has part: feature:3926529-3926691:-1:exon
so has part: feature:3925257-3925413:-1:exon
so has part: feature:3922256-3922326:-1:exon
so has part: feature:3921860-3921920:-1:exon
so has part: feature:3921070-3921189:-1:exon
so has part: feature:3920388-3920823:-1:exon
so has part: feature:3916488-3916632:-1:exon
so has part: feature:3914838-3915226:-1:exon
so has part: feature:3913716-3914081:-1:exon
so has part: feature:3912024-3912173:-1:exon
so has part: feature:3909786-3909866:-1:exon
so has part: feature:3909013-3909172:-1:exon
so has part: feature:3907496-3907666:-1:exon
so has part: feature:3907256-3907407:-1:exon
so has part: feature:3904591-3906738:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3954404-3954416:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3952775-3952926:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3938068-3938099:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3936654-3936771:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3935534-3935666:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3932025-3932196:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3931099-3931170:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3929889-3930039:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3929404-3929539:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3926529-3926691:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3925257-3925413:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3922256-3922326:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3921860-3921920:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3921070-3921189:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3920388-3920823:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3916488-3916632:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3914838-3915226:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3913716-3914081:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3912024-3912173:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3909786-3909866:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3909013-3909172:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3907496-3907666:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3907256-3907407:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3904591-3906738:-1:exon

SMG7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: SMG7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nonsense-mediated mRNA decay factor SMG7 isoform X2
translation: MSLLCAQYLRQAEVLKADMTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEVKTRWSVSDFIKAFIKFHGHVYLSKSLEKLSPLREKLEEQFKRLLFQKAFNSQQLVHITVINLFQLHHLRDFSNETEQHSYSQDEQLCWTQLLALFMSFLGVLCKCPLQNDYQEDSGAAYPLPAVKVSMDWLKLRPSVFQEAVVDERRYIWPWLISLLNSFQPHEEDLSNNNATPLPEEFELQGFLALRPSFRNLDFSKGHQAITGDKEGQQRRIRQQRLIFTGKWIADNQPRLIQCENEVGKLLFLTEIPELLLEDPSEAKESLALQETSIAEPLSTDGSPGLKSVLSSGRSLNNNCDTGEKPMVTFKENIKPREINREQGRIYPPKDVGRERRDYSKGIVANKNDGKKDNNKRKNETKKCGLDKMQEAGKQNVAVQVKSQTEMRKTPVSEARKTPVTQTPSQASSSQFIPIHHPGAFPPLPSRPGFPPPTYVVPPPVAFSMSTGYTFPGGVSVPGTFLQPTAHSPAGNQVQGGKQSHIPYSQQRPSGPGPMTQGPQQTPPPSQQPLSSLPAQATAQSASQLQVQALAQQQQQQSPTKAVQGLGKSPPHHSGFQQFPQTDSSKQLWNPPQVQGSLGKIMPVKQSYYLQAQDPLKLFEQSLQPPVMQQQPLEKKMKPFPMEPYNQNPSEVKVPEYYWDSSYGMADNRVMAQQSNMDRRGKRQGVFRPEQDAVSRMTFEDPKSSPLLPPDLLKSLAALEEEEELIFSNPPDLYPALLGPLASLPGRSLFKSLLEKPSELMSQSSSFLSLSGFSLNQERYPNNSMFNEVYGKNMNTSTKTEVTPSVAHQETSLYSLFEGTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHNSVPFSNFGPIGTPDNRDRRVADRWKTDKPAMGGFGLDYLPATSSSSESSWHQSSAPSGTWAAQGPPAMEDSSAVLMESLKSIWSSSMMHPGPSALEQLLMQQKQKQQRGQGTMNPPH
SIO_010081: SMG7
subclass of: SO_0000673
so part of: SMG7
location: complement(join(3906625..3906738,3907256..3907407,3907496..3907666,3909013..3909172,3909786..3909866,3912024..3912173,3913716..3914081,3914838..3915226,3916488..3916632,3920388..3920823,3921070..3921189,3921860..3921920,3922256..3922326,3925257..3925413,3926529..3926691,3929404..3929539,3929889..3930039,3931099..3931170,3932025..3932196,3935534..3935666,3936654..3936771,3938068..3938099,3961275..3961303))
location: region:3906625-3961303:-1
so has part: feature:3961275-3961303:-1:exon
so has part: feature:3938068-3938099:-1:exon
so has part: feature:3936654-3936771:-1:exon
so has part: feature:3935534-3935666:-1:exon
so has part: feature:3932025-3932196:-1:exon
so has part: feature:3931099-3931170:-1:exon
so has part: feature:3929889-3930039:-1:exon
so has part: feature:3929404-3929539:-1:exon
so has part: feature:3926529-3926691:-1:exon
so has part: feature:3925257-3925413:-1:exon
so has part: feature:3922256-3922326:-1:exon
so has part: feature:3921860-3921920:-1:exon
so has part: feature:3921070-3921189:-1:exon
so has part: feature:3920388-3920823:-1:exon
so has part: feature:3916488-3916632:-1:exon
so has part: feature:3914838-3915226:-1:exon
so has part: feature:3913716-3914081:-1:exon
so has part: feature:3912024-3912173:-1:exon
so has part: feature:3909786-3909866:-1:exon
so has part: feature:3909013-3909172:-1:exon
so has part: feature:3907496-3907666:-1:exon
so has part: feature:3907256-3907407:-1:exon
so has part: feature:3906625-3906738:-1:exon

XP_050756575.1
type: Protein
SIO_000068: ncbiprotein

position:3906625:-1
position: 3906625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3961303:-1
position: 3961303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3961275-3961303:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3938068-3938099:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3936654-3936771:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3935534-3935666:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3932025-3932196:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3931099-3931170:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3929889-3930039:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3929404-3929539:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3926529-3926691:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3925257-3925413:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3922256-3922326:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3921860-3921920:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3921070-3921189:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3920388-3920823:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3916488-3916632:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3914838-3915226:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3913716-3914081:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3912024-3912173:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3909786-3909866:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3909013-3909172:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3907496-3907666:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3907256-3907407:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3906625-3906738:-1:exon

SMG7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: SMG7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nonsense-mediated mRNA decay factor SMG7 isoform X4
translation: MGLKSEIPLRQAEVLKADMTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEVKTRWSVSDFIKAFIKFHGHVYLSKSLEKLSPLREKLEEQFKRLLFQKAFNSQQLVHITVINLFQLHHLRDFSNETEQHSYSQDEQLCWTQLLALFMSFLGVLCKCPLQNDYQEDSGAAYPLPAVKVSMDWLKLRPSVFQEAVVDERRIWPWLISLLNSFQPHEEDLSNNNATPLPEEFELQGFLALRPSFRNLDFSKGHQAITGDKEGQQRRIRQQRLIFTGKWIADNQPRLIQCENEVGKLLFLTEIPELLLEDPSEAKESLALQETSIAEPLSTDGSPGLKSVLSSGRSLNNNCDTGEKPMVTFKENIKPREINREQGRIYPPKDVGRERRDYSKGIVANKNDGKKDNNKRKNETKKCGLDKMQEAGKQNVAVQVKSQTEMRKTPVSEARKTPVTQTPSQASSSQFIPIHHPGAFPPLPSRPGFPPPTYVVPPPVAFSMSTGYTFPGGVSVPGTFLQPTAHSPAGNQVQGGKQSHIPYSQQRPSGPGPMTQGPQQTPPPSQQPLSSLPAQATAQSASQLQVQALAQQQQQQSPTKAVQGLGKSPPHHSGFQQFPQTDSSKQLWNPPQVQGSLGKIMPVKQSYYLQAQDPLKLFEQSLQPPVMQQQPLEKKMKPFPMEPYNQNPSEVKVPEYYWDSSYGMADNRVMAQQSNMDRRGKRQGVFRPEQDAVSRMTFEKSLLEKPSELMSQSSSFLSLSGFSLNQERYPNNSMFNEVYGKNMNTSTKTEVTPSVAHQETSLYSLFEGTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHNSVPFSNFGPIGTPDNRDRRVADRWKTDKPAMGGFGLDYLPATSSSSESSWHQSSAPSGTWAAQGPPAMEDSSAVLMESLKSIWSSSMMHPGPSALEQLLMQQKQKQQRGQGTMNPPH
SIO_010081: SMG7
subclass of: SO_0000673
so part of: SMG7
location: complement(join(3906625..3906738,3907256..3907407,3907496..3907666,3909013..3909172,3909786..3909866,3913716..3914081,3914838..3915226,3916488..3916632,3920388..3920823,3921070..3921189,3921860..3921920,3922256..3922326,3925260..3925413,3926529..3926691,3929404..3929539,3929889..3930039,3931099..3931170,3932025..3932196,3935534..3935666,3936654..3936771,3938068..3938099,3952775..3952803))
location: region:3906625-3952803:-1
so has part: feature:3952775-3952803:-1:exon
so has part: feature:3938068-3938099:-1:exon
so has part: feature:3936654-3936771:-1:exon
so has part: feature:3935534-3935666:-1:exon
so has part: feature:3932025-3932196:-1:exon
so has part: feature:3931099-3931170:-1:exon
so has part: feature:3929889-3930039:-1:exon
so has part: feature:3929404-3929539:-1:exon
so has part: feature:3926529-3926691:-1:exon
so has part: feature:3925260-3925413:-1:exon
so has part: feature:3922256-3922326:-1:exon
so has part: feature:3921860-3921920:-1:exon
so has part: feature:3921070-3921189:-1:exon
so has part: feature:3920388-3920823:-1:exon
so has part: feature:3916488-3916632:-1:exon
so has part: feature:3914838-3915226:-1:exon
so has part: feature:3913716-3914081:-1:exon
so has part: feature:3909786-3909866:-1:exon
so has part: feature:3909013-3909172:-1:exon
so has part: feature:3907496-3907666:-1:exon
so has part: feature:3907256-3907407:-1:exon
so has part: feature:3906625-3906738:-1:exon

XP_050756577.1
type: Protein
SIO_000068: ncbiprotein

position:3952803:-1
position: 3952803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3952775-3952803:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3938068-3938099:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3936654-3936771:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3935534-3935666:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3932025-3932196:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3931099-3931170:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3929889-3930039:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3929404-3929539:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3926529-3926691:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3925260-3925413:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3922256-3922326:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3921860-3921920:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3921070-3921189:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3920388-3920823:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3916488-3916632:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3914838-3915226:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3913716-3914081:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3909786-3909866:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3909013-3909172:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3907496-3907666:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3907256-3907407:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3906625-3906738:-1:exon

SMG7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: SMG7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nonsense-mediated mRNA decay factor SMG7 isoform X5
translation: MGLKSEIPLRQAEVLKADMTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEVKTRWSVSDFIKAFIKFHGHVYLSKSLEKLSPLREKLEEQFKRLLFQKAFNSQQLVHITVINLFQLHHLRDFSNETEQHSYSQDEQLCWTQLLALFMSFLGVLCKCPLQNDYQEDSGAAYPLPAVKVSMDWLKLRPSVFQEAVVDERRYIWPWLISLLNSFQPHEEDLSNNNATPLPEEFELQGFLALRPSFRNLDFSKGHQAITGDKEGQQRRIRQQRLIFTGKWIADNQPRLIQCENEVGKLLFLTEIPELLLEDPSEAKESLALQETSIAEPLSTDGSPGLKSVLSSGRSLNNNCDTGEKPMVTFKENIKPREINREQGRIYPPKDVGRERRDYSKGIVANKNDGKKDNNKRKNETKKCGLDKMQEAGKQNVAVQVKSQTEMRKTPVSEARKTPVTQTPSQASSSQFIPIHHPGAFPPLPSRPGFPPPTYVVPPPVAFSMSTGYTFPGGVSVPGTFLQPTAHSPAGNQVQAQATAQSASQLQVQALAQQQQQQSPTKAVQGLGKSPPHHSGFQQFPQTDSSKQLWNPPQVQGSLGKIMPVKQSYYLQAQDPLKLFEQSLQPPVMQQQPLEKKMKPFPMEPYNQNPSEVKVPEYYWDSSYGMADNRVMAQQSNMDRRGKRQGVFRPEQDAVSRMTFEKSLLEKPSELMSQSSSFLSLSGFSLNQERYPNNSMFNEVYGKNMNTSTKTEVTPSVAHQETSLYSLFEGTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHNSVPFSNFGPIGTPDNRDRRVADRWKTDKPAMGGFGLDYLPATSSSSESSWHQSSAPSGTWAAQGPPAMEDSSAVLMESLKSIWSSSMMHPGPSALEQLLMQQKQKQQRGQGTMNPPH
SIO_010081: SMG7
subclass of: SO_0000673
so part of: SMG7
location: complement(join(3906625..3906738,3907256..3907407,3907496..3907666,3909013..3909172,3909786..3909866,3913716..3914081,3914838..3914968,3915086..3915226,3916488..3916632,3920388..3920823,3921070..3921189,3921860..3921920,3922256..3922326,3925257..3925413,3926529..3926691,3929404..3929539,3929889..3930039,3931099..3931170,3932025..3932196,3935534..3935666,3936654..3936771,3938068..3938099,3952775..3952803))
location: region:3906625-3952803:-1
so has part: feature:3952775-3952803:-1:exon
so has part: feature:3938068-3938099:-1:exon
so has part: feature:3936654-3936771:-1:exon
so has part: feature:3935534-3935666:-1:exon
so has part: feature:3932025-3932196:-1:exon
so has part: feature:3931099-3931170:-1:exon
so has part: feature:3929889-3930039:-1:exon
so has part: feature:3929404-3929539:-1:exon
so has part: feature:3926529-3926691:-1:exon
so has part: feature:3925257-3925413:-1:exon
so has part: feature:3922256-3922326:-1:exon
so has part: feature:3921860-3921920:-1:exon
so has part: feature:3921070-3921189:-1:exon
so has part: feature:3920388-3920823:-1:exon
so has part: feature:3916488-3916632:-1:exon
so has part: feature:3915086-3915226:-1:exon
so has part: feature:3914838-3914968:-1:exon
so has part: feature:3913716-3914081:-1:exon
so has part: feature:3909786-3909866:-1:exon
so has part: feature:3909013-3909172:-1:exon
so has part: feature:3907496-3907666:-1:exon
so has part: feature:3907256-3907407:-1:exon
so has part: feature:3906625-3906738:-1:exon

XP_050756578.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3952775-3952803:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3938068-3938099:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3936654-3936771:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3935534-3935666:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3932025-3932196:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3931099-3931170:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3929889-3930039:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3929404-3929539:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3926529-3926691:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3925257-3925413:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3922256-3922326:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3921860-3921920:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3921070-3921189:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3920388-3920823:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3916488-3916632:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3915086-3915226:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3914838-3914968:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3913716-3914081:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3909786-3909866:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3909013-3909172:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3907496-3907666:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3907256-3907407:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3906625-3906738:-1:exon

SMG7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: SMG7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nonsense-mediated mRNA decay factor SMG7 isoform X3
translation: MGLKSEIPLRQAEVLKADMTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEVKTRWSVSDFIKAFIKFHGHVYLSKSLEKLSPLREKLEEQFKRLLFQKAFNSQQLVHITVINLFQLHHLRDFSNETEQHSYSQDEQLCWTQLLALFMSFLGVLCKCPLQNDYQEDSGAAYPLPAVKVSMDWLKLRPSVFQEAVVDERRYIWPWLISLLNSFQPHEEDLSNNNATPLPEEFELQGFLALRPSFRNLDFSKGHQAITGDKEGQQRRIRQQRLIFTGKWIADNQPRLIQCENEVGKLLFLTEIPELLLEDPSEAKESLALQETSIAEPLSTDGSPGLKSVLSSGRSLNNNCDTGEKPMVTFKENIKPREINREQGRIYPPKDVGRERRDYSKGIVANKNDGKKDNNKRKNETKKCGLDKMQEAGKQNVAVQVKSQTEMRKTPVSEARKTPVTQTPSQASSSQFIPIHHPGAFPPLPSRPGFPPPTYVVPPPVAFSMSTGYTFPGGVSVPGTFLQPTAHSPAGNQVQGGKQSHIPYSQQRPSGPGPMTQGPQQTPPPSQQPLSSLPAQATAQSASQLQVQALAQQQQQQSPTKAVQGLGKSPPHHSGFQQFPQTDSSKQLWNPPQVQGSLGKIMPVKQSYYLQAQDPLKLFEQSLQPPVMQQQPLEKKMKPFPMEPYNQNPSEVKVPEYYWDSSYGMADNRVMAQQSNMDRRGKRQGVFRPEQDAVSRMTFEKSLLEKPSELMSQSSSFLSLSGFSLNQERYPNNSMFNEVYGKNMNTSTKTEVTPSVAHQETSLYSLFEGTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHNSVPFSNFGPIGTPDNRDRRVADRWKTDKPAMGGFGLDYLPATSSSSESSWHQSSAPSGTWAAQGPPAMEDSSAVLMESLKSIWSSSMMHPGPSALEQLLMQQKQKQQRGQGTMNPPH
SIO_010081: SMG7
subclass of: SO_0000673
so part of: SMG7
location: complement(join(3906625..3906738,3907256..3907407,3907496..3907666,3909013..3909172,3909786..3909866,3913716..3914081,3914838..3915226,3916488..3916632,3920388..3920823,3921070..3921189,3921860..3921920,3922256..3922326,3925257..3925413,3926529..3926691,3929404..3929539,3929889..3930039,3931099..3931170,3932025..3932196,3935534..3935666,3936654..3936771,3938068..3938099,3952775..3952803))
location: region:3906625-3952803:-1
so has part: feature:3952775-3952803:-1:exon
so has part: feature:3938068-3938099:-1:exon
so has part: feature:3936654-3936771:-1:exon
so has part: feature:3935534-3935666:-1:exon
so has part: feature:3932025-3932196:-1:exon
so has part: feature:3931099-3931170:-1:exon
so has part: feature:3929889-3930039:-1:exon
so has part: feature:3929404-3929539:-1:exon
so has part: feature:3926529-3926691:-1:exon
so has part: feature:3925257-3925413:-1:exon
so has part: feature:3922256-3922326:-1:exon
so has part: feature:3921860-3921920:-1:exon
so has part: feature:3921070-3921189:-1:exon
so has part: feature:3920388-3920823:-1:exon
so has part: feature:3916488-3916632:-1:exon
so has part: feature:3914838-3915226:-1:exon
so has part: feature:3913716-3914081:-1:exon
so has part: feature:3909786-3909866:-1:exon
so has part: feature:3909013-3909172:-1:exon
so has part: feature:3907496-3907666:-1:exon
so has part: feature:3907256-3907407:-1:exon
so has part: feature:3906625-3906738:-1:exon

XP_050756576.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3952775-3952803:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3938068-3938099:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3936654-3936771:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3935534-3935666:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3932025-3932196:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3931099-3931170:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3929889-3930039:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3929404-3929539:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3926529-3926691:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3925257-3925413:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3922256-3922326:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3921860-3921920:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3921070-3921189:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3920388-3920823:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3916488-3916632:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3914838-3915226:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3913716-3914081:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3909786-3909866:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3909013-3909172:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3907496-3907666:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3907256-3907407:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3906625-3906738:-1:exon

SMG7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: SMG7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nonsense-mediated mRNA decay factor SMG7 isoform X1
translation: MGLKSEIPLRQAEVLKADMTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEVKTRWSVSDFIKAFIKFHGHVYLSKSLEKLSPLREKLEEQFKRLLFQKAFNSQQLVHITVINLFQLHHLRDFSNETEQHSYSQDEQLCWTQLLALFMSFLGVLCKCPLQNDYQEDSGAAYPLPAVKVSMDWLKLRPSVFQEAVVDERRYIWPWLISLLNSFQPHEEDLSNNNATPLPEEFELQGFLALRPSFRNLDFSKGHQAITGDKEGQQRRIRQQRLIFTGKWIADNQPRLIQCENEVGKLLFLTEIPELLLEDPSEAKESLALQETSIAEPLSTDGSPGLKSVLSSGRSLNNNCDTGEKPMVTFKENIKPREINREQGRIYPPKDVGRERRDYSKGIVANKNDGKKDNNKRKNETKKCGLDKMQEAGKQNVAVQVKSQTEMRKTPVSEARKTPVTQTPSQASSSQFIPIHHPGAFPPLPSRPGFPPPTYVVPPPVAFSMSTGYTFPGGVSVPGTFLQPTAHSPAGNQVQGGKQSHIPYSQQRPSGPGPMTQGPQQTPPPSQQPLSSLPAQATAQSASQLQVQALAQQQQQQSPTKAVQGLGKSPPHHSGFQQFPQTDSSKQLWNPPQVQGSLGKIMPVKQSYYLQAQDPLKLFEQSLQPPVMQQQPLEKKMKPFPMEPYNQNPSEVKVPEYYWDSSYGMADNRVMAQQSNMDRRGKRQGVFRPEQDAVSRMTFEDPKSSPLLPPDLLKSLAALEEEEELIFSNPPDLYPALLGPLASLPGRSLFKSLLEKPSELMSQSSSFLSLSGFSLNQERYPNNSMFNEVYGKNMNTSTKTEVTPSVAHQETSLYSLFEGTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHNSVPFSNFGPIGTPDNRDRRVADRWKTDKPAMGGFGLDYLPATSSSSESSWHQSSAPSGTWAAQGPPAMEDSSAVLMESLKSIWSSSMMHPGPSALEQLLMQQKQKQQRGQGTMNPPH
SIO_010081: SMG7
subclass of: SO_0000673
so part of: SMG7
location: complement(join(3906625..3906738,3907256..3907407,3907496..3907666,3909013..3909172,3909786..3909866,3912024..3912173,3913716..3914081,3914838..3915226,3916488..3916632,3920388..3920823,3921070..3921189,3921860..3921920,3922256..3922326,3925257..3925413,3926529..3926691,3929404..3929539,3929889..3930039,3931099..3931170,3932025..3932196,3935534..3935666,3936654..3936771,3938068..3938099,3952775..3952803))
location: region:3906625-3952803:-1
so has part: feature:3952775-3952803:-1:exon
so has part: feature:3938068-3938099:-1:exon
so has part: feature:3936654-3936771:-1:exon
so has part: feature:3935534-3935666:-1:exon
so has part: feature:3932025-3932196:-1:exon
so has part: feature:3931099-3931170:-1:exon
so has part: feature:3929889-3930039:-1:exon
so has part: feature:3929404-3929539:-1:exon
so has part: feature:3926529-3926691:-1:exon
so has part: feature:3925257-3925413:-1:exon
so has part: feature:3922256-3922326:-1:exon
so has part: feature:3921860-3921920:-1:exon
so has part: feature:3921070-3921189:-1:exon
so has part: feature:3920388-3920823:-1:exon
so has part: feature:3916488-3916632:-1:exon
so has part: feature:3914838-3915226:-1:exon
so has part: feature:3913716-3914081:-1:exon
so has part: feature:3912024-3912173:-1:exon
so has part: feature:3909786-3909866:-1:exon
so has part: feature:3909013-3909172:-1:exon
so has part: feature:3907496-3907666:-1:exon
so has part: feature:3907256-3907407:-1:exon
so has part: feature:3906625-3906738:-1:exon

XP_050756574.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3952775-3952803:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3938068-3938099:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3936654-3936771:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3935534-3935666:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3932025-3932196:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3931099-3931170:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3929889-3930039:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3929404-3929539:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3926529-3926691:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3925257-3925413:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3922256-3922326:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3921860-3921920:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3921070-3921189:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3920388-3920823:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3916488-3916632:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3914838-3915226:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3913716-3914081:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3912024-3912173:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3909786-3909866:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3909013-3909172:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3907496-3907666:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3907256-3907407:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3906625-3906738:-1:exon

NMNAT2
type: Gene
subclass of: SO_0000704
RO_0002162: 33616
gene: NMNAT2
note: nicotinamide nucleotide adenylyltransferase 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3972835..4002438
location: region:3972835-4002438:1
so has part: feature:3972835-4002438:1:exon
subclass of: SO_0000010

127019288
type: Gene
SIO_000068: ncbigene

position:3972835:1
position: 3972835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4002438:1
position: 4002438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3972835-4002438:1:exon

NMNAT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: NMNAT2
product: nicotinamide nucleotide adenylyltransferase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
transcript id: XM_050901276.1
SIO_010081: NMNAT2
subclass of: SO_0000673
so part of: NMNAT2
location: join(3972835..3972919,3994215..3994303,3995030..3995097,3995830..3995908,3997115..3997244,3997902..3997982,3998098..3998142,3999479..3999555,4001793..4001894,4002140..4002207,4002336..4002438)
location: region:3972835-4002438:1
so has part: feature:3972835-3972919:1:exon
so has part: feature:3994215-3994303:1:exon
so has part: feature:3995030-3995097:1:exon
so has part: feature:3995830-3995908:1:exon
so has part: feature:3997115-3997244:1:exon
so has part: feature:3997902-3997982:1:exon
so has part: feature:3998098-3998142:1:exon
so has part: feature:3999479-3999555:1:exon
so has part: feature:4001793-4001894:1:exon
so has part: feature:4002140-4002207:1:exon
so has part: feature:4002336-4002438:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3972835-3972919:1:exon

position:3972919:1
position: 3972919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3994215-3994303:1:exon

position:3994215:1
position: 3994215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3994303:1
position: 3994303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3995030-3995097:1:exon

position:3995030:1
position: 3995030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3995097:1
position: 3995097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3995830-3995908:1:exon

position:3995830:1
position: 3995830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3995908:1
position: 3995908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3997115-3997244:1:exon

position:3997115:1
position: 3997115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3997244:1
position: 3997244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3997902-3997982:1:exon

position:3997902:1
position: 3997902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3997982:1
position: 3997982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3998098-3998142:1:exon

position:3998098:1
position: 3998098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3998142:1
position: 3998142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3999479-3999555:1:exon

position:3999479:1
position: 3999479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3999555:1
position: 3999555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4001793-4001894:1:exon

position:4001793:1
position: 4001793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4001894:1
position: 4001894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4002140-4002207:1:exon

position:4002140:1
position: 4002140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4002207:1
position: 4002207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4002336-4002438:1:exon

position:4002336:1
position: 4002336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NMNAT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: NMNAT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nicotinamide/nicotinic acid mononucleotide adenylyltransferase 2
translation: MTETTKTHVILLACGSFNPITKGHIQMFERARDYLHKTGRFIVIGGIVSPVHDSYGKTGLVSSRHRLTMCQLAVQSSDWIRVDPWECYQDTWQTTCSVLEHHRDLMKRVTGCILSNVNTPSITPVIGQPQNESSQTIYQNNNNVSNKPTAAKILGKVGESLSRICCVRPPMERFTFVDENANLGTVMRYEEIELRILLLCGSDLLESFCIPGLWNEADMEVIVGEFGIVVVPRDGADPDRIMNHSSILRKYKNNILVVKDDSNHPMSVVSSTKSRLALQHGDGHVVDYLCQPVIDYILKSQLYINASG
SIO_010081: NMNAT2
subclass of: SO_0000673
so part of: NMNAT2
location: join(3972835..3972919,3994215..3994303,3995030..3995097,3995830..3995908,3997115..3997244,3997902..3997982,3998098..3998142,3999479..3999555,4001793..4001894,4002140..4002207,4002336..4002438)
location: region:3972835-4002438:1
so has part: feature:3972835-3972919:1:exon
so has part: feature:3994215-3994303:1:exon
so has part: feature:3995030-3995097:1:exon
so has part: feature:3995830-3995908:1:exon
so has part: feature:3997115-3997244:1:exon
so has part: feature:3997902-3997982:1:exon
so has part: feature:3998098-3998142:1:exon
so has part: feature:3999479-3999555:1:exon
so has part: feature:4001793-4001894:1:exon
so has part: feature:4002140-4002207:1:exon
so has part: feature:4002336-4002438:1:exon

XP_050757233.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3972835-3972919:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3994215-3994303:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3995030-3995097:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3995830-3995908:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3997115-3997244:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3997902-3997982:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3998098-3998142:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3999479-3999555:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4001793-4001894:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4002140-4002207:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4002336-4002438:1:exon

LAMC2
type: Gene
subclass of: SO_0000704
RO_0002162: 33616
gene: LAMC2
note: laminin subunit gamma 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4007438..4025843)
location: region:4007438-4025843:-1
so has part: feature:4007438-4025843:-1:exon
subclass of: SO_0000010

127019394
type: Gene
SIO_000068: ncbigene

position:4007438:-1
position: 4007438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4025843:-1
position: 4025843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4007438-4025843:-1:exon

LAMC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: LAMC2
product: laminin subunit gamma 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_050901430.1
SIO_010081: LAMC2
subclass of: SO_0000673
so part of: LAMC2
location: complement(join(4007438..4007896,4008105..4008204,4008290..4008448,4009049..4009248,4009336..4009450,4009975..4010124,4010392..4010536,4011330..4011467,4011929..4012008,4012289..4012494,4012618..4012771,4013103..4013239,4013482..4013715,4014230..4014409,4015375..4015593,4015912..4016024,4016377..4016566,4016696..4016818,4017202..4017338,4017564..4017662,4018589..4018718,4021232..4021420,4025762..4025843))
location: region:4007438-4025843:-1
so has part: feature:4025762-4025843:-1:exon
so has part: feature:4021232-4021420:-1:exon
so has part: feature:4018589-4018718:-1:exon
so has part: feature:4017564-4017662:-1:exon
so has part: feature:4017202-4017338:-1:exon
so has part: feature:4016696-4016818:-1:exon
so has part: feature:4016377-4016566:-1:exon
so has part: feature:4015912-4016024:-1:exon
so has part: feature:4015375-4015593:-1:exon
so has part: feature:4014230-4014409:-1:exon
so has part: feature:4013482-4013715:-1:exon
so has part: feature:4013103-4013239:-1:exon
so has part: feature:4012618-4012771:-1:exon
so has part: feature:4012289-4012494:-1:exon
so has part: feature:4011929-4012008:-1:exon
so has part: feature:4011330-4011467:-1:exon
so has part: feature:4010392-4010536:-1:exon
so has part: feature:4009975-4010124:-1:exon
so has part: feature:4009336-4009450:-1:exon
so has part: feature:4009049-4009248:-1:exon
so has part: feature:4008290-4008448:-1:exon
so has part: feature:4008105-4008204:-1:exon
so has part: feature:4007438-4007896:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4025762-4025843:-1:exon

position:4025762:-1
position: 4025762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4021232-4021420:-1:exon

position:4021232:-1
position: 4021232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4021420:-1
position: 4021420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4018589-4018718:-1:exon

position:4018589:-1
position: 4018589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4018718:-1
position: 4018718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4017564-4017662:-1:exon

position:4017564:-1
position: 4017564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4017662:-1
position: 4017662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4017202-4017338:-1:exon

position:4017202:-1
position: 4017202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4017338:-1
position: 4017338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4016696-4016818:-1:exon

position:4016696:-1
position: 4016696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4016818:-1
position: 4016818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4016377-4016566:-1:exon

position:4016377:-1
position: 4016377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4016566:-1
position: 4016566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4015912-4016024:-1:exon

position:4015912:-1
position: 4015912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4016024:-1
position: 4016024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4015375-4015593:-1:exon

position:4015375:-1
position: 4015375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4015593:-1
position: 4015593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4014230-4014409:-1:exon

position:4014230:-1
position: 4014230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4014409:-1
position: 4014409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4013482-4013715:-1:exon

position:4013482:-1
position: 4013482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4013715:-1
position: 4013715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4013103-4013239:-1:exon

position:4013103:-1
position: 4013103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4013239:-1
position: 4013239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4012618-4012771:-1:exon

position:4012618:-1
position: 4012618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4012771:-1
position: 4012771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4012289-4012494:-1:exon

position:4012289:-1
position: 4012289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4012494:-1
position: 4012494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4011929-4012008:-1:exon

position:4011929:-1
position: 4011929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4012008:-1
position: 4012008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4011330-4011467:-1:exon

position:4011330:-1
position: 4011330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4011467:-1
position: 4011467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4010392-4010536:-1:exon

position:4010392:-1
position: 4010392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4010536:-1
position: 4010536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4009975-4010124:-1:exon

position:4009975:-1
position: 4009975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4010124:-1
position: 4010124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4009336-4009450:-1:exon

position:4009336:-1
position: 4009336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4009450:-1
position: 4009450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4009049-4009248:-1:exon

position:4009049:-1
position: 4009049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4009248:-1
position: 4009248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4008290-4008448:-1:exon

position:4008290:-1
position: 4008290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4008448:-1
position: 4008448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4008105-4008204:-1:exon

position:4008105:-1
position: 4008105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4008204:-1
position: 4008204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4007438-4007896:-1:exon

position:4007896:-1
position: 4007896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LAMC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: LAMC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: laminin subunit gamma-2
translation: MAGCWLLPLCCLVASLLPAALSANRGEVCDCNGMSRQCIFDWHLLRETGNGYRCLSCLGNTEGARCERCKEGFFRQREEDCCLPCRCHPQGALSPQCDSDGRCSCKPGVMGKKCDQCQPGFESLSESGCRRSGQSPQCECDLAGSAGGCLSGRCVCKASTTGERCERCKRNFYNLDARNPTGCSPCFCYGHSAACVSADNHSIYNITSTFQQGAEGWRGVHESGSPAQLQWSPRHQDVFIAARRSEPIYFVAPAKFLGNQQLSYGQTLSFDYRLDRGGRQPSPHDVVLEGDGLRISAPFLPQGKVLPCGVSQTYTFRLDEHPSSKWSPRLNHFEYRRLLGNLTALWIRATFGEYSTGYIDNVTLVSAQPVTGVPAPWVERCECPAEYRGQFCERCAPGYRRDAPGLGPFSICVPCNCQGGGICDPDTGECYSGDENVANSVSCPFGFYRDPRQPHSCRACPCSNGQGCSVVPGSEEVVCDRCPPGAAGANCEYCADGYFGDPAASRPCQPCRCNGNVEPNAVGNCDRRTGECLKCIYNTAGFYCDRCKDGFFGNPLAPDPADKCRACACDSAGAEPLKCGSDGSCICKPGFEGPSCEESECPACYGQVKAQVDLYLQQLAELELLFSEVQAGGGAETQELEGRMQLAEEMLRTILGEALSLQASDRSLESRVARMNRQGSSSQSRLDEIKATVERLRSLGSQYERQVQDTRRLLERARLDLDRSGAALRRVTIPVSNLPGGSNQFLMLAQEALRLANSHAQAANAIEQATKAAREDARQALDLVRAAAGGEAAASGSLLGLLGKYEELKSLVGGLKAEADGMASEADKAYQGSLVLLSSLSRLTETDIGSFEGEATRLKQDASALLSLVDTYMAQYRQLQSRTGRWEEEIKQLLRKGEGERATLTQLLSRANLARSTALQAMSAGNATFYEVEQILKSLREFNLQADDKRREAEDAMRRLLIISNMVTSAREKTDRAEAILGSAASESKAASSAAGEAKEITMGIQQEITQLKVEANKTADGVLALEKAVAALQREAKEVDGEFERKLLEVEADATVIQETAQEAQRVHAKAGQAGVAVQETLSALEELLRLMNQPGAVDEDGLKQLEMNFSKAKTRSNQLKYEMSELEQTAALQKARVLTLESSIDEILADIKNLEDIQKSLPPGCYNTKAIELP
SIO_010081: LAMC2
subclass of: SO_0000673
so part of: LAMC2
location: complement(join(4007646..4007896,4008105..4008204,4008290..4008448,4009049..4009248,4009336..4009450,4009975..4010124,4010392..4010536,4011330..4011467,4011929..4012008,4012289..4012494,4012618..4012771,4013103..4013239,4013482..4013715,4014230..4014409,4015375..4015593,4015912..4016024,4016377..4016566,4016696..4016818,4017202..4017338,4017564..4017662,4018589..4018718,4021232..4021420,4025762..4025843))
location: region:4007646-4025843:-1
so has part: feature:4025762-4025843:-1:exon
so has part: feature:4021232-4021420:-1:exon
so has part: feature:4018589-4018718:-1:exon
so has part: feature:4017564-4017662:-1:exon
so has part: feature:4017202-4017338:-1:exon
so has part: feature:4016696-4016818:-1:exon
so has part: feature:4016377-4016566:-1:exon
so has part: feature:4015912-4016024:-1:exon
so has part: feature:4015375-4015593:-1:exon
so has part: feature:4014230-4014409:-1:exon
so has part: feature:4013482-4013715:-1:exon
so has part: feature:4013103-4013239:-1:exon
so has part: feature:4012618-4012771:-1:exon
so has part: feature:4012289-4012494:-1:exon
so has part: feature:4011929-4012008:-1:exon
so has part: feature:4011330-4011467:-1:exon
so has part: feature:4010392-4010536:-1:exon
so has part: feature:4009975-4010124:-1:exon
so has part: feature:4009336-4009450:-1:exon
so has part: feature:4009049-4009248:-1:exon
so has part: feature:4008290-4008448:-1:exon
so has part: feature:4008105-4008204:-1:exon
so has part: feature:4007646-4007896:-1:exon

XP_050757387.1
type: Protein
SIO_000068: ncbiprotein

position:4007646:-1
position: 4007646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4025762-4025843:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4021232-4021420:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4018589-4018718:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4017564-4017662:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4017202-4017338:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4016696-4016818:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4016377-4016566:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4015912-4016024:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4015375-4015593:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4014230-4014409:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4013482-4013715:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4013103-4013239:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4012618-4012771:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4012289-4012494:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4011929-4012008:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4011330-4011467:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4010392-4010536:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4009975-4010124:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4009336-4009450:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4009049-4009248:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4008290-4008448:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4008105-4008204:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4007646-4007896:-1:exon

LAMC1
type: Gene
subclass of: SO_0000704
RO_0002162: 33616
gene: LAMC1
note: laminin subunit gamma 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4032290..4102480)
location: region:4032290-4102480:-1
so has part: feature:4032290-4102480:-1:exon
subclass of: SO_0000010

127019393
type: Gene
SIO_000068: ncbigene

position:4032290:-1
position: 4032290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4102480:-1
position: 4102480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4032290-4102480:-1:exon

LAMC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: LAMC1
product: laminin subunit gamma 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_050901429.1
SIO_010081: LAMC1
subclass of: SO_0000673
so part of: LAMC1
location: complement(join(4032290..4035348,4035768..4035867,4036425..4036583,4036815..4037014,4037388..4037502,4037920..4038069,4038655..4038799,4038991..4039128,4039540..4039619,4040044..4040249,4042634..4042790,4042951..4043129,4043864..4044006,4044469..4044622,4044945..4045190,4046594..4046782,4046877..4047098,4048423..4048535,4048806..4048995,4049083..4049205,4050112..4050248,4050353..4050451,4050552..4050669,4052699..4052887,4054026..4054192,4055644..4055774,4057729..4058033,4102084..4102480))
location: region:4032290-4102480:-1
so has part: feature:4102084-4102480:-1:exon
so has part: feature:4057729-4058033:-1:exon
so has part: feature:4055644-4055774:-1:exon
so has part: feature:4054026-4054192:-1:exon
so has part: feature:4052699-4052887:-1:exon
so has part: feature:4050552-4050669:-1:exon
so has part: feature:4050353-4050451:-1:exon
so has part: feature:4050112-4050248:-1:exon
so has part: feature:4049083-4049205:-1:exon
so has part: feature:4048806-4048995:-1:exon
so has part: feature:4048423-4048535:-1:exon
so has part: feature:4046877-4047098:-1:exon
so has part: feature:4046594-4046782:-1:exon
so has part: feature:4044945-4045190:-1:exon
so has part: feature:4044469-4044622:-1:exon
so has part: feature:4043864-4044006:-1:exon
so has part: feature:4042951-4043129:-1:exon
so has part: feature:4042634-4042790:-1:exon
so has part: feature:4040044-4040249:-1:exon
so has part: feature:4039540-4039619:-1:exon
so has part: feature:4038991-4039128:-1:exon
so has part: feature:4038655-4038799:-1:exon
so has part: feature:4037920-4038069:-1:exon
so has part: feature:4037388-4037502:-1:exon
so has part: feature:4036815-4037014:-1:exon
so has part: feature:4036425-4036583:-1:exon
so has part: feature:4035768-4035867:-1:exon
so has part: feature:4032290-4035348:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4102084-4102480:-1:exon

position:4102084:-1
position: 4102084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4057729-4058033:-1:exon

position:4057729:-1
position: 4057729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4058033:-1
position: 4058033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4055644-4055774:-1:exon

position:4055644:-1
position: 4055644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4055774:-1
position: 4055774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4054026-4054192:-1:exon

position:4054026:-1
position: 4054026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4054192:-1
position: 4054192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4052699-4052887:-1:exon

position:4052699:-1
position: 4052699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4052887:-1
position: 4052887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4050552-4050669:-1:exon

position:4050552:-1
position: 4050552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4050669:-1
position: 4050669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4050353-4050451:-1:exon

position:4050353:-1
position: 4050353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4050451:-1
position: 4050451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4050112-4050248:-1:exon

position:4050112:-1
position: 4050112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4050248:-1
position: 4050248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4049083-4049205:-1:exon

position:4049083:-1
position: 4049083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4049205:-1
position: 4049205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4048806-4048995:-1:exon

position:4048806:-1
position: 4048806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4048995:-1
position: 4048995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4048423-4048535:-1:exon

position:4048423:-1
position: 4048423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4048535:-1
position: 4048535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4046877-4047098:-1:exon

position:4046877:-1
position: 4046877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4047098:-1
position: 4047098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4046594-4046782:-1:exon

position:4046594:-1
position: 4046594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4046782:-1
position: 4046782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4044945-4045190:-1:exon

position:4044945:-1
position: 4044945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4045190:-1
position: 4045190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4044469-4044622:-1:exon

position:4044469:-1
position: 4044469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4044622:-1
position: 4044622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4043864-4044006:-1:exon

position:4043864:-1
position: 4043864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4044006:-1
position: 4044006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4042951-4043129:-1:exon

position:4042951:-1
position: 4042951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4043129:-1
position: 4043129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4042634-4042790:-1:exon

position:4042634:-1
position: 4042634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4042790:-1
position: 4042790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4040044-4040249:-1:exon

position:4040044:-1
position: 4040044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4040249:-1
position: 4040249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4039540-4039619:-1:exon

position:4039540:-1
position: 4039540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4039619:-1
position: 4039619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4038991-4039128:-1:exon

position:4038991:-1
position: 4038991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4039128:-1
position: 4039128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4038655-4038799:-1:exon

position:4038655:-1
position: 4038655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4038799:-1
position: 4038799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4037920-4038069:-1:exon

position:4037920:-1
position: 4037920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4038069:-1
position: 4038069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:4037388-4037502:-1:exon

position:4037388:-1
position: 4037388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4037502:-1
position: 4037502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:4036815-4037014:-1:exon

position:4036815:-1
position: 4036815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4037014:-1
position: 4037014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:4036425-4036583:-1:exon

position:4036425:-1
position: 4036425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4036583:-1
position: 4036583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:4035768-4035867:-1:exon

position:4035768:-1
position: 4035768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4035867:-1
position: 4035867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:4032290-4035348:-1:exon

position:4035348:-1
position: 4035348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LAMC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: LAMC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: laminin subunit gamma-1
translation: MGGGGERRARALWLTVLWLWLPGRCGGAMDECTEERSGRPQRCMPEFVNAAFNATVLATHTCGTPAEEYCVQTGVTGVTQSCHLCDAAQPHLRHGAAFLTDYNSPADATWWQSRTMLAGVQHPAAVNLTLHLGKAFDITYVRLKFHTSRPESFAIYKRTREDGPWVPYQYYSGSCESTYHKVNRGFIRTGEDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTATDIRVTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNELGKLVCNCKHNTFGVDCEKCLPFFNDRPWRRATAESANECLPCDCNGRSQECYFDPELYRSTGHGGHCTGCSDNTDGAHCERCRDSFYRLGSEEGCLPCSCNPVGSLSTQCDSYGQCSCKPGVMGDKCDRCQPGFHSLSEAGCRPCSCNLAGSTGECNVETGRCTCKDNVEGFHCERCKPGFFHLDSSNPRGCTPCFCFGHSSVCTSAVGYSIYSITSSFQFGEDEWRAEQRDGSEVLLQWSVETQDISVISDSYFPMYFVAPRKFLGNQLLSYGQNLTFSFRVDRRDTRLSAEDLVLEGAGLRVSVPLIAQGNPYPSENALVYTFRLHEATDYPWRPALTAFDFQKLLHNLTSIKIRGTYSERSAGHLDDVTITSARPGPGVPVAWVESCSCPAGYEGQFCERCSSGYRREAPSLGPYSPCVPCSCNGHSETCEPETGVCNCRDNTAGSHCEKCSDGYYGDATAGTASDCQPCPCPGSSSCAVVPRTKEVVCTSCQAGTTGKRCELCDDAYFGDPLGENGAVRPCRLCQCNDNIDPNAVGNCDRQTGECLKCIYNTAGFYCDRCKDGFFGNPLAPDPADKCRACHCNPYGTVNQQTSCNQVTGQCECLSHVTGRDCSACEPGFFNLQSGRGCERCNCHALGSTNGQCDIRTGQCECQPGVAGQRCDRCEVNHFGFGSEGCKPCDCDPEGSRSLQCQENGRCECKEGFVGSRCDQCEENYFYNRSWPGCQECPACYRLVKDKVAEQRERLQELENLIANLGTGEETVTDQAFEDRLKQAERDVMELLQEAQNSKDVDQGLMDRLKDINSTLASQLNRLRNIQGTVRETESLAEQARVRVEDTEDLISLASNMLEKAKMAADNVSITPLESSGDPNNMTLLAEEARKLAERHKKEADEIVRIAKAANDTSTEAYQLLLKTLAGENQTANDIDELNQKYNQARNISRDLEKQANKVLAEAEEAGNKALQIYANLTSLPTVDSTGLENEANKIKKEAEELDQLIARKLKDYEDLREDMKGKELEVKNLLEKGKTEQQTADQLLARADAAKALAEEAARKGNGTLQEANTILSNLKDFDKRVNDNKTAAEEALKKIPAITQTIAEANNKTHQAELALGNAAADAREAKAKADDAEKIAGSVQKSAAATKAEADKTFADVTGLAREVDDMMKQLQDAEKELKRKQDDAEQDMMMAGMASQAAQEAEDNARKAKNSVNSLLAVINELLDQLGQLETVDLNKLNEIEGTLNSAKDQMKDSDLDQKVSFLEREARKQDDAIQAYNRDIEEILKDISNLEDIKKTLPSGCFNTPSIEKP
SIO_010081: LAMC1
subclass of: SO_0000673
so part of: LAMC1
location: complement(join(4035092..4035348,4035768..4035867,4036425..4036583,4036815..4037014,4037388..4037502,4037920..4038069,4038655..4038799,4038991..4039128,4039540..4039619,4040044..4040249,4042634..4042790,4042951..4043129,4043864..4044006,4044469..4044622,4044945..4045190,4046594..4046782,4046877..4047098,4048423..4048535,4048806..4048995,4049083..4049205,4050112..4050248,4050353..4050451,4050552..4050669,4052699..4052887,4054026..4054192,4055644..4055774,4057729..4058033,4102084..4102480))
location: region:4035092-4102480:-1
so has part: feature:4102084-4102480:-1:exon
so has part: feature:4057729-4058033:-1:exon
so has part: feature:4055644-4055774:-1:exon
so has part: feature:4054026-4054192:-1:exon
so has part: feature:4052699-4052887:-1:exon
so has part: feature:4050552-4050669:-1:exon
so has part: feature:4050353-4050451:-1:exon
so has part: feature:4050112-4050248:-1:exon
so has part: feature:4049083-4049205:-1:exon
so has part: feature:4048806-4048995:-1:exon
so has part: feature:4048423-4048535:-1:exon
so has part: feature:4046877-4047098:-1:exon
so has part: feature:4046594-4046782:-1:exon
so has part: feature:4044945-4045190:-1:exon
so has part: feature:4044469-4044622:-1:exon
so has part: feature:4043864-4044006:-1:exon
so has part: feature:4042951-4043129:-1:exon
so has part: feature:4042634-4042790:-1:exon
so has part: feature:4040044-4040249:-1:exon
so has part: feature:4039540-4039619:-1:exon
so has part: feature:4038991-4039128:-1:exon
so has part: feature:4038655-4038799:-1:exon
so has part: feature:4037920-4038069:-1:exon
so has part: feature:4037388-4037502:-1:exon
so has part: feature:4036815-4037014:-1:exon
so has part: feature:4036425-4036583:-1:exon
so has part: feature:4035768-4035867:-1:exon
so has part: feature:4035092-4035348:-1:exon

XP_050757386.1
type: Protein
SIO_000068: ncbiprotein

position:4035092:-1
position: 4035092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4102084-4102480:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4057729-4058033:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4055644-4055774:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4054026-4054192:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4052699-4052887:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4050552-4050669:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4050353-4050451:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4050112-4050248:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4049083-4049205:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4048806-4048995:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4048423-4048535:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4046877-4047098:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4046594-4046782:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4044945-4045190:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4044469-4044622:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4043864-4044006:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4042951-4043129:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4042634-4042790:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4040044-4040249:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4039540-4039619:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4038991-4039128:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4038655-4038799:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4037920-4038069:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4037388-4037502:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4036815-4037014:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4036425-4036583:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4035768-4035867:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4035092-4035348:-1:exon

SHCBP1L
type: Gene
subclass of: SO_0000704
RO_0002162: 33616
gene: SHCBP1L
note: SHC binding and spindle associated 1 like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4102752..4126404
location: region:4102752-4126404:1
so has part: feature:4102752-4126404:1:exon
subclass of: SO_0000010

127019045
type: Gene
SIO_000068: ncbigene

position:4102752:1
position: 4102752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4126404:1
position: 4126404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4102752-4126404:1:exon

SHCBP1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: SHCBP1L
product: SHC binding and spindle associated 1 like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_050900954.1
SIO_010081: SHCBP1L
subclass of: SO_0000673
so part of: SHCBP1L
location: join(4102752..4102763,4114764..4114898,4116180..4116388,4121755..4121931,4124306..4124514,4125163..4125285,4126136..4126404)
location: region:4102752-4126404:1
so has part: feature:4102752-4102763:1:exon
so has part: feature:4114764-4114898:1:exon
so has part: feature:4116180-4116388:1:exon
so has part: feature:4121755-4121931:1:exon
so has part: feature:4124306-4124514:1:exon
so has part: feature:4125163-4125285:1:exon
so has part: feature:4126136-4126404:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4102752-4102763:1:exon

position:4102763:1
position: 4102763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4114764-4114898:1:exon

position:4114764:1
position: 4114764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4114898:1
position: 4114898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4116180-4116388:1:exon

position:4116180:1
position: 4116180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4116388:1
position: 4116388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4121755-4121931:1:exon

position:4121755:1
position: 4121755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4121931:1
position: 4121931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4124306-4124514:1:exon

position:4124306:1
position: 4124306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4124514:1
position: 4124514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4125163-4125285:1:exon

position:4125163:1
position: 4125163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4125285:1
position: 4125285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4126136-4126404:1:exon

position:4126136:1
position: 4126136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SHCBP1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: SHCBP1L
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: testicular spindle-associated protein SHCBP1L
translation: MAEAAEGASDATDEYLLEKLKVKETSWLGICETKPAHFVTGSEDLITPSVTCEPPQSSSCQLKASVSFAQPFSSHFENTPRELVDNVLEELELCVTLLEAWPGEGQGDAGFELPRRWKLKQRSLFPVRVKDFSVDAPFQQHSNLNTALESQYSGDHAVVFPGEYEAVNLSLLTKDIIILGTGKPEEPVVVSEPPHESSVVSKAQETKLTHLRSVQQRTGNGVVAAKSGXSALPGAPLSITDSEITGAWGSGVELYPRSTAILESYKIHRCNRTRTSETSHHSQGGINVKVVPEPKLEKKNNHIFSNGGXGVTILQSTEKPTSAERIVEFTASDHAKDDTCFNLIPDLNLEMNTNALDDIKDSSVVHRWISKLHVAFGF
SIO_010081: SHCBP1L
subclass of: SO_0000673
so part of: SHCBP1L
location: join(4102752..4102763,4114764..4114898,4116180..4116388,4121755..4121931,4124306..4124514,4125163..4125285,4126136..4126404)
location: region:4102752-4126404:1
so has part: feature:4102752-4102763:1:exon
so has part: feature:4114764-4114898:1:exon
so has part: feature:4116180-4116388:1:exon
so has part: feature:4121755-4121931:1:exon
so has part: feature:4124306-4124514:1:exon
so has part: feature:4125163-4125285:1:exon
so has part: feature:4126136-4126404:1:exon

XP_050756911.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4102752-4102763:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4114764-4114898:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4116180-4116388:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4121755-4121931:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4124306-4124514:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4125163-4125285:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4126136-4126404:1:exon

DHX9
type: Gene
subclass of: SO_0000704
RO_0002162: 33616
gene: DHX9
note: DExH-box helicase 9; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4133633..4193184)
location: region:4133633-4193184:-1
so has part: feature:4133633-4193184:-1:exon
subclass of: SO_0000010

127019311
type: Gene
SIO_000068: ncbigene

position:4133633:-1
position: 4133633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4193184:-1
position: 4193184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4133633-4193184:-1:exon

DHX9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: DHX9
product: DExH-box helicase 9, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_050901302.1
SIO_010081: DHX9
subclass of: SO_0000673
so part of: DHX9
location: complement(join(4133633..4133981,4134143..4134304,4135031..4135142,4137084..4137244,4138917..4139069,4139742..4139815,4139981..4140075,4140276..4140489,4141319..4141419,4142060..4142216,4143430..4143512,4144040..4144181,4144692..4144883,4145191..4145268,4146638..4146799,4146895..4146984,4147600..4147733,4148400..4148446,4151622..4151767,4152161..4152273,4152551..4152665,4153946..4154086,4155909..4156019))
location: region:4133633-4156019:-1
so has part: feature:4155909-4156019:-1:exon
so has part: feature:4153946-4154086:-1:exon
so has part: feature:4152551-4152665:-1:exon
so has part: feature:4152161-4152273:-1:exon
so has part: feature:4151622-4151767:-1:exon
so has part: feature:4148400-4148446:-1:exon
so has part: feature:4147600-4147733:-1:exon
so has part: feature:4146895-4146984:-1:exon
so has part: feature:4146638-4146799:-1:exon
so has part: feature:4145191-4145268:-1:exon
so has part: feature:4144692-4144883:-1:exon
so has part: feature:4144040-4144181:-1:exon
so has part: feature:4143430-4143512:-1:exon
so has part: feature:4142060-4142216:-1:exon
so has part: feature:4141319-4141419:-1:exon
so has part: feature:4140276-4140489:-1:exon
so has part: feature:4139981-4140075:-1:exon
so has part: feature:4139742-4139815:-1:exon
so has part: feature:4138917-4139069:-1:exon
so has part: feature:4137084-4137244:-1:exon
so has part: feature:4135031-4135142:-1:exon
so has part: feature:4134143-4134304:-1:exon
so has part: feature:4133633-4133981:-1:exon

position:4156019:-1
position: 4156019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4155909-4156019:-1:exon

position:4155909:-1
position: 4155909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4153946-4154086:-1:exon

position:4153946:-1
position: 4153946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4154086:-1
position: 4154086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4152551-4152665:-1:exon

position:4152551:-1
position: 4152551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4152665:-1
position: 4152665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4152161-4152273:-1:exon

position:4152161:-1
position: 4152161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4152273:-1
position: 4152273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4151622-4151767:-1:exon

position:4151622:-1
position: 4151622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4151767:-1
position: 4151767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4148400-4148446:-1:exon

position:4148400:-1
position: 4148400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4148446:-1
position: 4148446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4147600-4147733:-1:exon

position:4147600:-1
position: 4147600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4147733:-1
position: 4147733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4146895-4146984:-1:exon

position:4146895:-1
position: 4146895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4146984:-1
position: 4146984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4146638-4146799:-1:exon

position:4146638:-1
position: 4146638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4146799:-1
position: 4146799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4145191-4145268:-1:exon

position:4145191:-1
position: 4145191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4145268:-1
position: 4145268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4144692-4144883:-1:exon

position:4144692:-1
position: 4144692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4144883:-1
position: 4144883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4144040-4144181:-1:exon

position:4144040:-1
position: 4144040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4144181:-1
position: 4144181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4143430-4143512:-1:exon

position:4143430:-1
position: 4143430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4143512:-1
position: 4143512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4142060-4142216:-1:exon

position:4142060:-1
position: 4142060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4142216:-1
position: 4142216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4141319-4141419:-1:exon

position:4141319:-1
position: 4141319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4141419:-1
position: 4141419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4140276-4140489:-1:exon

position:4140276:-1
position: 4140276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4140489:-1
position: 4140489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4139981-4140075:-1:exon

position:4139981:-1
position: 4139981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4140075:-1
position: 4140075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4139742-4139815:-1:exon

position:4139742:-1
position: 4139742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4139815:-1
position: 4139815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4138917-4139069:-1:exon

position:4138917:-1
position: 4138917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4139069:-1
position: 4139069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4137084-4137244:-1:exon

position:4137084:-1
position: 4137084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4137244:-1
position: 4137244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4135031-4135142:-1:exon

position:4135031:-1
position: 4135031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4135142:-1
position: 4135142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4134143-4134304:-1:exon

position:4134143:-1
position: 4134143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4134304:-1
position: 4134304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4133633-4133981:-1:exon

position:4133981:-1
position: 4133981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DHX9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: DHX9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent RNA helicase A isoform X1
translation: MGDVKNYLYAWCGRRRVTPAYEIRTGGGRSRQTFLCEVRVEGFNYIGMGNSTNKKDAQSNAARDFVNYLVRVNEMKRDEIPAFGPAAGDTPDGGYEAARDVTGSSSTLGGPLPPHLIIEAEIGNGPDAAPGNCGNRGAQWDRGANLKDYYSRKEEQEVQATSESEVDLNADLHGGWTLENAKARLNQFFQKEKIQEEYKYTEMGPDHNRSFIAEMNIYVKQLGRRIFSREHGSNKKLAAQSCALSLVRQLFHLGVIEPYSGQTKKKGESVEPYEVLLSSDLENQLQKTVRELSLEIVPLPEDPGNPVLINVGKLAHFEPSQRQSHMGVVPWSPPHSNWNPWTGCNIDEGPLAHLTPEQISMDLKSDFMYRLEQDQELQRIQQERETLPVKNFESEILDAIRHNSVVVIRGATGCGKTTQVPQYILDEYIKTNRAAECNIVVTQPRRISAVSVAERVSYERGEQPGQSCGYSVRFESVLPRPHASVMFCTVGVLLRKVEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEIRVILMSATIDTSMFCEYFFNCPIVEVFGRTFPVQDYFLEDCIQMTQFIPPPKEKKKKEKDEESGEDDDANCNLICSDEYGPETKHSMAQLNEKETSFELIEALLIYIKTLNVPGAVLVFLPGWNLIYTMQKHLEMNPRFGGRQYRILPLHSQIPLEEQRRVFDPVPPGVTKVILSTSIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRAGFCFHLCSRARFERLQTHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAERTLRELDALDSNDELIPLGRILAKLPIEPRLGKMMIMGCIFYVGDAVCTISAATCFPEPFISEGKRLGYVHRNFAGNRFSDHVALLSVFQAWDDARMGGEEAEKRFCEHKRLSMATLRMTWEAKVQLKDILINSGFPEGDSAWT
SIO_010081: DHX9
subclass of: SO_0000673
so part of: DHX9
location: complement(join(4133834..4133981,4134143..4134304,4135031..4135142,4137084..4137244,4138917..4139069,4139742..4139815,4139981..4140075,4140276..4140489,4141319..4141419,4142060..4142216,4143430..4143512,4144040..4144181,4144692..4144883,4145191..4145268,4146638..4146799,4146895..4146984,4147600..4147733,4148400..4148446,4151622..4151767,4152161..4152273,4152551..4152665,4153946..4154086,4155909..4156019))
location: region:4133834-4156019:-1
so has part: feature:4155909-4156019:-1:exon
so has part: feature:4153946-4154086:-1:exon
so has part: feature:4152551-4152665:-1:exon
so has part: feature:4152161-4152273:-1:exon
so has part: feature:4151622-4151767:-1:exon
so has part: feature:4148400-4148446:-1:exon
so has part: feature:4147600-4147733:-1:exon
so has part: feature:4146895-4146984:-1:exon
so has part: feature:4146638-4146799:-1:exon
so has part: feature:4145191-4145268:-1:exon
so has part: feature:4144692-4144883:-1:exon
so has part: feature:4144040-4144181:-1:exon
so has part: feature:4143430-4143512:-1:exon
so has part: feature:4142060-4142216:-1:exon
so has part: feature:4141319-4141419:-1:exon
so has part: feature:4140276-4140489:-1:exon
so has part: feature:4139981-4140075:-1:exon
so has part: feature:4139742-4139815:-1:exon
so has part: feature:4138917-4139069:-1:exon
so has part: feature:4137084-4137244:-1:exon
so has part: feature:4135031-4135142:-1:exon
so has part: feature:4134143-4134304:-1:exon
so has part: feature:4133834-4133981:-1:exon

XP_050757259.1
type: Protein
SIO_000068: ncbiprotein

position:4133834:-1
position: 4133834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4155909-4156019:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4153946-4154086:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4152551-4152665:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4152161-4152273:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4151622-4151767:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4148400-4148446:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4147600-4147733:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4146895-4146984:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4146638-4146799:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4145191-4145268:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4144692-4144883:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4144040-4144181:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4143430-4143512:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4142060-4142216:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4141319-4141419:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4140276-4140489:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4139981-4140075:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4139742-4139815:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4138917-4139069:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4137084-4137244:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4135031-4135142:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4134143-4134304:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4133834-4133981:-1:exon

DHX9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: DHX9
product: DExH-box helicase 9, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_050901308.1
SIO_010081: DHX9
subclass of: SO_0000673
so part of: DHX9
location: complement(join(4153923..4154086,4159155..4159194,4160621..4160705,4161739..4161887,4162703..4162795,4164037..4164112,4164203..4164260,4165388..4165475,4166624..4166697,4168296..4168364,4186560..4186602,4186795..4186825,4187819..4187870,4188446..4188495,4188838..4188890,4189350..4189375,4189981..4190073,4190493..4190524,4190919..4190964,4191231..4191270,4191810..4191856,4193159..4193184))
location: region:4153923-4193184:-1
so has part: feature:4193159-4193184:-1:exon
so has part: feature:4191810-4191856:-1:exon
so has part: feature:4191231-4191270:-1:exon
so has part: feature:4190919-4190964:-1:exon
so has part: feature:4190493-4190524:-1:exon
so has part: feature:4189981-4190073:-1:exon
so has part: feature:4189350-4189375:-1:exon
so has part: feature:4188838-4188890:-1:exon
so has part: feature:4188446-4188495:-1:exon
so has part: feature:4187819-4187870:-1:exon
so has part: feature:4186795-4186825:-1:exon
so has part: feature:4186560-4186602:-1:exon
so has part: feature:4168296-4168364:-1:exon
so has part: feature:4166624-4166697:-1:exon
so has part: feature:4165388-4165475:-1:exon
so has part: feature:4164203-4164260:-1:exon
so has part: feature:4164037-4164112:-1:exon
so has part: feature:4162703-4162795:-1:exon
so has part: feature:4161739-4161887:-1:exon
so has part: feature:4160621-4160705:-1:exon
so has part: feature:4159155-4159194:-1:exon
so has part: feature:4153923-4154086:-1:exon

position:4153923:-1
position: 4153923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4193159-4193184:-1:exon

position:4193159:-1
position: 4193159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4191810-4191856:-1:exon

position:4191810:-1
position: 4191810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4191856:-1
position: 4191856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4191231-4191270:-1:exon

position:4191231:-1
position: 4191231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4191270:-1
position: 4191270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4190919-4190964:-1:exon

position:4190919:-1
position: 4190919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4190964:-1
position: 4190964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4190493-4190524:-1:exon

position:4190493:-1
position: 4190493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4190524:-1
position: 4190524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4189981-4190073:-1:exon

position:4189981:-1
position: 4189981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4190073:-1
position: 4190073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4189350-4189375:-1:exon

position:4189350:-1
position: 4189350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4189375:-1
position: 4189375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4188838-4188890:-1:exon

position:4188838:-1
position: 4188838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4188890:-1
position: 4188890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4188446-4188495:-1:exon

position:4188446:-1
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reference: sequence
type: ReverseStrandPosition
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position:4188495:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 10
SIO_000628: feature:4187819-4187870:-1:exon

position:4187819:-1
position: 4187819
reference: sequence
type: ReverseStrandPosition
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position:4187870:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 11
SIO_000628: feature:4186795-4186825:-1:exon

position:4186795:-1
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reference: sequence
type: ReverseStrandPosition
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position:4186825:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 12
SIO_000628: feature:4186560-4186602:-1:exon

position:4186560:-1
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reference: sequence
type: ReverseStrandPosition
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position:4186602:-1
position: 4186602
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 13
SIO_000628: feature:4168296-4168364:-1:exon

position:4168296:-1
position: 4168296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4168364:-1
position: 4168364
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 14
SIO_000628: feature:4166624-4166697:-1:exon

position:4166624:-1
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reference: sequence
type: ReverseStrandPosition
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position:4166697:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 15
SIO_000628: feature:4165388-4165475:-1:exon

position:4165388:-1
position: 4165388
reference: sequence
type: ReverseStrandPosition
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position:4165475:-1
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reference: sequence
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urn:…
SIO_000300: 16
SIO_000628: feature:4164203-4164260:-1:exon

position:4164203:-1
position: 4164203
reference: sequence
type: ReverseStrandPosition
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position:4164260:-1
position: 4164260
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 17
SIO_000628: feature:4164037-4164112:-1:exon

position:4164037:-1
position: 4164037
reference: sequence
type: ReverseStrandPosition
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position:4164112:-1
position: 4164112
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 18
SIO_000628: feature:4162703-4162795:-1:exon

position:4162703:-1
position: 4162703
reference: sequence
type: ReverseStrandPosition
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position:4162795:-1
position: 4162795
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 19
SIO_000628: feature:4161739-4161887:-1:exon

position:4161739:-1
position: 4161739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4161887:-1
position: 4161887
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 20
SIO_000628: feature:4160621-4160705:-1:exon

position:4160621:-1
position: 4160621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4160705:-1
position: 4160705
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 21
SIO_000628: feature:4159155-4159194:-1:exon

position:4159155:-1
position: 4159155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4159194:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4153923-4154086:-1:exon

DHX9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: DHX9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent RNA helicase A isoform X4
translation: MSEERTVLSATSLGEEAILKLLYEELRSSMTPGKKLQGLVAATITPMTPDGQINLSVIRKYVDYLVSEQNVKNVFVNGTTGEGLSLNIQERKQLAEEWMRQGKDKLDHVIIHVGALSLPESQELARHAAAIGASGIAAIAPFFFKPTNKDELTAFLQKVASEAPAVPFYYYHIPPLTGVKIRVEELLDGIKERIPTFQGVKFSDTDLLDLAQCINKNEREQFSFLYGVDEYIQLFGPKNQSDVASLCKARPCVSTEVSVSHWGISQLCHQTRFEWKALTTLAWAIPLTRKMRRATLLETLSITWFG
SIO_010081: DHX9
subclass of: SO_0000673
so part of: DHX9
location: complement(join(4153981..4154086,4159155..4159194,4160621..4160705,4161739..4161887,4162703..4162795,4164037..4164112,4164203..4164260,4165388..4165475,4166624..4166697,4168296..4168364,4186560..4186602,4186795..4186825,4187819..4187827))
location: region:4153981-4187827:-1
so has part: feature:4187819-4187827:-1:exon
so has part: feature:4186795-4186825:-1:exon
so has part: feature:4186560-4186602:-1:exon
so has part: feature:4168296-4168364:-1:exon
so has part: feature:4166624-4166697:-1:exon
so has part: feature:4165388-4165475:-1:exon
so has part: feature:4164203-4164260:-1:exon
so has part: feature:4164037-4164112:-1:exon
so has part: feature:4162703-4162795:-1:exon
so has part: feature:4161739-4161887:-1:exon
so has part: feature:4160621-4160705:-1:exon
so has part: feature:4159155-4159194:-1:exon
so has part: feature:4153981-4154086:-1:exon

XP_050757265.1
type: Protein
SIO_000068: ncbiprotein

position:4153981:-1
position: 4153981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4187827:-1
position: 4187827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4187819-4187827:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4186795-4186825:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4186560-4186602:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4168296-4168364:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4166624-4166697:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4165388-4165475:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4164203-4164260:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4164037-4164112:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4162703-4162795:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4161739-4161887:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4160621-4160705:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4159155-4159194:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4153981-4154086:-1:exon

DHX9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: DHX9
product: DExH-box helicase 9, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_050901309.1
SIO_010081: DHX9
subclass of: SO_0000673
so part of: DHX9
location: complement(join(4154019..4154086,4159155..4159194,4160621..4160705,4161504..4161550,4161739..4161887,4162703..4162795,4164037..4164112,4164203..4164260,4165388..4165475,4166624..4166697,4168296..4168364,4186560..4186602,4186795..4186825,4187819..4187870,4188446..4188495,4188838..4188890,4189350..4189375,4189981..4190073,4190493..4190524,4190919..4190964,4191231..4191270,4191810..4191856,4193159..4193184))
location: region:4154019-4193184:-1
so has part: feature:4193159-4193184:-1:exon
so has part: feature:4191810-4191856:-1:exon
so has part: feature:4191231-4191270:-1:exon
so has part: feature:4190919-4190964:-1:exon
so has part: feature:4190493-4190524:-1:exon
so has part: feature:4189981-4190073:-1:exon
so has part: feature:4189350-4189375:-1:exon
so has part: feature:4188838-4188890:-1:exon
so has part: feature:4188446-4188495:-1:exon
so has part: feature:4187819-4187870:-1:exon
so has part: feature:4186795-4186825:-1:exon
so has part: feature:4186560-4186602:-1:exon
so has part: feature:4168296-4168364:-1:exon
so has part: feature:4166624-4166697:-1:exon
so has part: feature:4165388-4165475:-1:exon
so has part: feature:4164203-4164260:-1:exon
so has part: feature:4164037-4164112:-1:exon
so has part: feature:4162703-4162795:-1:exon
so has part: feature:4161739-4161887:-1:exon
so has part: feature:4161504-4161550:-1:exon
so has part: feature:4160621-4160705:-1:exon
so has part: feature:4159155-4159194:-1:exon
so has part: feature:4154019-4154086:-1:exon

position:4154019:-1
position: 4154019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4193159-4193184:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4191810-4191856:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4191231-4191270:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4190919-4190964:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4190493-4190524:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4189981-4190073:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4189350-4189375:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4188838-4188890:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4188446-4188495:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4187819-4187870:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4186795-4186825:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4186560-4186602:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4168296-4168364:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4166624-4166697:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4165388-4165475:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4164203-4164260:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4164037-4164112:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4162703-4162795:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4161739-4161887:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4161504-4161550:-1:exon

position:4161504:-1
position: 4161504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4161550:-1
position: 4161550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4160621-4160705:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4159155-4159194:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4154019-4154086:-1:exon

DHX9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: DHX9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent RNA helicase A isoform X5
translation: MSEERTVLSATSLGEEAILKLLYEELRSSMTPGKKLQGLVAATITPMTPDGQINLSVIRKYVDYLVSEQNVKNVFVNGTTGEGLSLNIQERKQLAEEWMRQGKDKLDHVIIHVGALSLPESQELARHAAAIGASGIAAIAPFFFKPTNKDELTAFLQKVASEAPAVPFYYYHIPPLTGVKIRVEELLDGIKERIPTFQGVKFSDTDLLDLAQCINKNEREQFSFLYGVDEQLLSALAIGASGAVGSTYNYLGRKTNLMLQAFAKPDLALARKYQFLTGEFLNFVIKLGSSGRL
SIO_010081: DHX9
subclass of: SO_0000673
so part of: DHX9
location: complement(join(4154067..4154086,4159155..4159194,4160621..4160705,4161504..4161550,4161739..4161887,4162703..4162795,4164037..4164112,4164203..4164260,4165388..4165475,4166624..4166697,4168296..4168364,4186560..4186602,4186795..4186825,4187819..4187827))
location: region:4154067-4187827:-1
so has part: feature:4187819-4187827:-1:exon
so has part: feature:4186795-4186825:-1:exon
so has part: feature:4186560-4186602:-1:exon
so has part: feature:4168296-4168364:-1:exon
so has part: feature:4166624-4166697:-1:exon
so has part: feature:4165388-4165475:-1:exon
so has part: feature:4164203-4164260:-1:exon
so has part: feature:4164037-4164112:-1:exon
so has part: feature:4162703-4162795:-1:exon
so has part: feature:4161739-4161887:-1:exon
so has part: feature:4161504-4161550:-1:exon
so has part: feature:4160621-4160705:-1:exon
so has part: feature:4159155-4159194:-1:exon
so has part: feature:4154067-4154086:-1:exon

XP_050757266.1
type: Protein
SIO_000068: ncbiprotein

position:4154067:-1
position: 4154067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4187819-4187827:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4186795-4186825:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4186560-4186602:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4168296-4168364:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4166624-4166697:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4165388-4165475:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4164203-4164260:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4164037-4164112:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4162703-4162795:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4161739-4161887:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4161504-4161550:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4160621-4160705:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4159155-4159194:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4154067-4154086:-1:exon

DHX9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: DHX9
product: DExH-box helicase 9, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
transcript id: XM_050901303.1
SIO_010081: DHX9
subclass of: SO_0000673
so part of: DHX9
location: complement(join(4156906..4157764,4159155..4159194,4160621..4160705,4161504..4161550,4161739..4161887,4162703..4162795,4164037..4164112,4164203..4164260,4165388..4165475,4166624..4166697,4168296..4168364,4186560..4186602,4186795..4186825,4187819..4187870,4188446..4188495,4188838..4188890,4189350..4189375,4189981..4190073,4190493..4190524,4190919..4190964,4191231..4191270,4191810..4191856,4193159..4193184))
location: region:4156906-4193184:-1
so has part: feature:4193159-4193184:-1:exon
so has part: feature:4191810-4191856:-1:exon
so has part: feature:4191231-4191270:-1:exon
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so has part: feature:4164037-4164112:-1:exon
so has part: feature:4162703-4162795:-1:exon
so has part: feature:4161739-4161887:-1:exon
so has part: feature:4161504-4161550:-1:exon
so has part: feature:4160621-4160705:-1:exon
so has part: feature:4159155-4159194:-1:exon
so has part: feature:4156906-4157764:-1:exon

position:4156906:-1
position: 4156906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4193159-4193184:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4191810-4191856:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4191231-4191270:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4190919-4190964:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4190493-4190524:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4189981-4190073:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4189350-4189375:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4188838-4188890:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4188446-4188495:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4187819-4187870:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4186795-4186825:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4186560-4186602:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4168296-4168364:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4166624-4166697:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4165388-4165475:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4164203-4164260:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4164037-4164112:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4162703-4162795:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4161739-4161887:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4161504-4161550:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4160621-4160705:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4159155-4159194:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4156906-4157764:-1:exon

position:4157764:-1
position: 4157764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DHX9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: DHX9
product: DExH-box helicase 9, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
transcript id: XM_050901304.1
SIO_010081: DHX9
subclass of: SO_0000673
so part of: DHX9
location: complement(join(4156906..4157764,4159155..4159194,4160621..4160705,4161504..4161550,4161739..4161887,4162703..4162795,4164037..4164112,4164203..4164260,4165388..4165475,4166624..4166697,4168296..4168364,4186560..4186602,4186795..4186825,4187819..4187870,4188446..4188495,4188838..4188890,4189350..4189375,4189981..4190073,4190493..4190524,4190919..4190964,4191231..4191270,4191810..4191856,4192104..4192262))
location: region:4156906-4192262:-1
so has part: feature:4192104-4192262:-1:exon
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so has part: feature:4190493-4190524:-1:exon
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so has part: feature:4188838-4188890:-1:exon
so has part: feature:4188446-4188495:-1:exon
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so has part: feature:4186795-4186825:-1:exon
so has part: feature:4186560-4186602:-1:exon
so has part: feature:4168296-4168364:-1:exon
so has part: feature:4166624-4166697:-1:exon
so has part: feature:4165388-4165475:-1:exon
so has part: feature:4164203-4164260:-1:exon
so has part: feature:4164037-4164112:-1:exon
so has part: feature:4162703-4162795:-1:exon
so has part: feature:4161739-4161887:-1:exon
so has part: feature:4161504-4161550:-1:exon
so has part: feature:4160621-4160705:-1:exon
so has part: feature:4159155-4159194:-1:exon
so has part: feature:4156906-4157764:-1:exon

position:4192262:-1
position: 4192262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4192104-4192262:-1:exon

position:4192104:-1
position: 4192104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4191810-4191856:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4191231-4191270:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4190919-4190964:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4190493-4190524:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4189981-4190073:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4189350-4189375:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4188838-4188890:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4188446-4188495:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4187819-4187870:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4186795-4186825:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4186560-4186602:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4168296-4168364:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4166624-4166697:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4165388-4165475:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4164203-4164260:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4164037-4164112:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4162703-4162795:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4161739-4161887:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4161504-4161550:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4160621-4160705:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4159155-4159194:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4156906-4157764:-1:exon

DHX9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: DHX9
product: DExH-box helicase 9, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
transcript id: XM_050901307.1
SIO_010081: DHX9
subclass of: SO_0000673
so part of: DHX9
location: complement(join(4156906..4157764,4159155..4159194,4160621..4160705,4161504..4161550,4161739..4161887,4162703..4162795,4164037..4164112,4164203..4164260,4165388..4165475,4166624..4166697,4168296..4168364,4185813..4185866))
location: region:4156906-4185866:-1
so has part: feature:4185813-4185866:-1:exon
so has part: feature:4168296-4168364:-1:exon
so has part: feature:4166624-4166697:-1:exon
so has part: feature:4165388-4165475:-1:exon
so has part: feature:4164203-4164260:-1:exon
so has part: feature:4164037-4164112:-1:exon
so has part: feature:4162703-4162795:-1:exon
so has part: feature:4161739-4161887:-1:exon
so has part: feature:4161504-4161550:-1:exon
so has part: feature:4160621-4160705:-1:exon
so has part: feature:4159155-4159194:-1:exon
so has part: feature:4156906-4157764:-1:exon

position:4185866:-1
position: 4185866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4185813-4185866:-1:exon

position:4185813:-1
position: 4185813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4168296-4168364:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4166624-4166697:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4165388-4165475:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4164203-4164260:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4164037-4164112:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4162703-4162795:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4161739-4161887:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4161504-4161550:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4160621-4160705:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4159155-4159194:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4156906-4157764:-1:exon

DHX9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: DHX9
product: DExH-box helicase 9, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
transcript id: XM_050901305.1
SIO_010081: DHX9
subclass of: SO_0000673
so part of: DHX9
location: complement(join(4156906..4157764,4159155..4159194,4160621..4160705,4161504..4161550,4161739..4161887,4162703..4162795,4164037..4164112,4164203..4164260,4165388..4165475,4166624..4166697,4168296..4168364,4168970..4169030))
location: region:4156906-4169030:-1
so has part: feature:4168970-4169030:-1:exon
so has part: feature:4168296-4168364:-1:exon
so has part: feature:4166624-4166697:-1:exon
so has part: feature:4165388-4165475:-1:exon
so has part: feature:4164203-4164260:-1:exon
so has part: feature:4164037-4164112:-1:exon
so has part: feature:4162703-4162795:-1:exon
so has part: feature:4161739-4161887:-1:exon
so has part: feature:4161504-4161550:-1:exon
so has part: feature:4160621-4160705:-1:exon
so has part: feature:4159155-4159194:-1:exon
so has part: feature:4156906-4157764:-1:exon

position:4169030:-1
position: 4169030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4168970-4169030:-1:exon

position:4168970:-1
position: 4168970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4168296-4168364:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4166624-4166697:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4165388-4165475:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4164203-4164260:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4164037-4164112:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4162703-4162795:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4161739-4161887:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4161504-4161550:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4160621-4160705:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4159155-4159194:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4156906-4157764:-1:exon

DHX9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: DHX9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent RNA helicase A isoform X2
translation: MSEERTVLSATSLGEEAILKLLYEELRSSMTPGKKLQGLVAATITPMTPDGQINLSVIRKYVDYLVSEQNVKNVFVNGTTGEGLSLNIQERKQLAEEWMRQGKDKLDHVIIHVGALSLPESQELARHAAAIGASGIAAIAPFFFKPTNKDELTAFLQKVASEAPAVPFYYYHIPPLTGVKIRVEELLDGIKERIPTFQGVKFSDTDLLDLAQCINKNEREQFSFLYGVDEQLLSALAIGASGAVGSTYNYLGRKTNLMLQAFAKPDLALARKYQFLTGEFLNFVIKLGFGVAQTKAVMTFVSGIPMGPPRLPLVDASEEFIVKAKAKLDSIVWPDGN
SIO_010081: DHX9
subclass of: SO_0000673
so part of: DHX9
location: complement(join(4157613..4157764,4159155..4159194,4160621..4160705,4161504..4161550,4161739..4161887,4162703..4162795,4164037..4164112,4164203..4164260,4165388..4165475,4166624..4166697,4168296..4168364,4186560..4186602,4186795..4186825,4187819..4187827))
location: region:4157613-4187827:-1
so has part: feature:4187819-4187827:-1:exon
so has part: feature:4186795-4186825:-1:exon
so has part: feature:4186560-4186602:-1:exon
so has part: feature:4168296-4168364:-1:exon
so has part: feature:4166624-4166697:-1:exon
so has part: feature:4165388-4165475:-1:exon
so has part: feature:4164203-4164260:-1:exon
so has part: feature:4164037-4164112:-1:exon
so has part: feature:4162703-4162795:-1:exon
so has part: feature:4161739-4161887:-1:exon
so has part: feature:4161504-4161550:-1:exon
so has part: feature:4160621-4160705:-1:exon
so has part: feature:4159155-4159194:-1:exon
so has part: feature:4157613-4157764:-1:exon

XP_050757260.1
type: Protein
SIO_000068: ncbiprotein

position:4157613:-1
position: 4157613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4187819-4187827:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4186795-4186825:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4186560-4186602:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4168296-4168364:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4166624-4166697:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4165388-4165475:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4164203-4164260:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4164037-4164112:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4162703-4162795:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4161739-4161887:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4161504-4161550:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4160621-4160705:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4159155-4159194:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4157613-4157764:-1:exon

DHX9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: DHX9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent RNA helicase A isoform X2
translation: MSEERTVLSATSLGEEAILKLLYEELRSSMTPGKKLQGLVAATITPMTPDGQINLSVIRKYVDYLVSEQNVKNVFVNGTTGEGLSLNIQERKQLAEEWMRQGKDKLDHVIIHVGALSLPESQELARHAAAIGASGIAAIAPFFFKPTNKDELTAFLQKVASEAPAVPFYYYHIPPLTGVKIRVEELLDGIKERIPTFQGVKFSDTDLLDLAQCINKNEREQFSFLYGVDEQLLSALAIGASGAVGSTYNYLGRKTNLMLQAFAKPDLALARKYQFLTGEFLNFVIKLGFGVAQTKAVMTFVSGIPMGPPRLPLVDASEEFIVKAKAKLDSIVWPDGN
SIO_010081: DHX9
subclass of: SO_0000673
so part of: DHX9
location: complement(join(4157613..4157764,4159155..4159194,4160621..4160705,4161504..4161550,4161739..4161887,4162703..4162795,4164037..4164112,4164203..4164260,4165388..4165475,4166624..4166697,4168296..4168364,4186560..4186602,4186795..4186825,4187819..4187827))
location: region:4157613-4187827:-1
so has part: feature:4187819-4187827:-1:exon
so has part: feature:4186795-4186825:-1:exon
so has part: feature:4186560-4186602:-1:exon
so has part: feature:4168296-4168364:-1:exon
so has part: feature:4166624-4166697:-1:exon
so has part: feature:4165388-4165475:-1:exon
so has part: feature:4164203-4164260:-1:exon
so has part: feature:4164037-4164112:-1:exon
so has part: feature:4162703-4162795:-1:exon
so has part: feature:4161739-4161887:-1:exon
so has part: feature:4161504-4161550:-1:exon
so has part: feature:4160621-4160705:-1:exon
so has part: feature:4159155-4159194:-1:exon
so has part: feature:4157613-4157764:-1:exon

XP_050757261.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4187819-4187827:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4186795-4186825:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4186560-4186602:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4168296-4168364:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4166624-4166697:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4165388-4165475:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4164203-4164260:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4164037-4164112:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4162703-4162795:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4161739-4161887:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4161504-4161550:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4160621-4160705:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4159155-4159194:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4157613-4157764:-1:exon

DHX9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: DHX9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent RNA helicase A isoform X3
translation: MTPGKKLQGLVAATITPMTPDGQINLSVIRKYVDYLVSEQNVKNVFVNGTTGEGLSLNIQERKQLAEEWMRQGKDKLDHVIIHVGALSLPESQELARHAAAIGASGIAAIAPFFFKPTNKDELTAFLQKVASEAPAVPFYYYHIPPLTGVKIRVEELLDGIKERIPTFQGVKFSDTDLLDLAQCINKNEREQFSFLYGVDEQLLSALAIGASGAVGSTYNYLGRKTNLMLQAFAKPDLALARKYQFLTGEFLNFVIKLGFGVAQTKAVMTFVSGIPMGPPRLPLVDASEEFIVKAKAKLDSIVWPDGN
SIO_010081: DHX9
subclass of: SO_0000673
so part of: DHX9
location: complement(join(4157613..4157764,4159155..4159194,4160621..4160705,4161504..4161550,4161739..4161887,4162703..4162795,4164037..4164112,4164203..4164260,4165388..4165475,4166624..4166697,4168296..4168360))
location: region:4157613-4168360:-1
so has part: feature:4168296-4168360:-1:exon
so has part: feature:4166624-4166697:-1:exon
so has part: feature:4165388-4165475:-1:exon
so has part: feature:4164203-4164260:-1:exon
so has part: feature:4164037-4164112:-1:exon
so has part: feature:4162703-4162795:-1:exon
so has part: feature:4161739-4161887:-1:exon
so has part: feature:4161504-4161550:-1:exon
so has part: feature:4160621-4160705:-1:exon
so has part: feature:4159155-4159194:-1:exon
so has part: feature:4157613-4157764:-1:exon

XP_050757262.1
type: Protein
SIO_000068: ncbiprotein

position:4168360:-1
position: 4168360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4168296-4168360:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4166624-4166697:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4165388-4165475:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4164203-4164260:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4164037-4164112:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4162703-4162795:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4161739-4161887:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4161504-4161550:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4160621-4160705:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4159155-4159194:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4157613-4157764:-1:exon

DHX9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: DHX9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent RNA helicase A isoform X3
translation: MTPGKKLQGLVAATITPMTPDGQINLSVIRKYVDYLVSEQNVKNVFVNGTTGEGLSLNIQERKQLAEEWMRQGKDKLDHVIIHVGALSLPESQELARHAAAIGASGIAAIAPFFFKPTNKDELTAFLQKVASEAPAVPFYYYHIPPLTGVKIRVEELLDGIKERIPTFQGVKFSDTDLLDLAQCINKNEREQFSFLYGVDEQLLSALAIGASGAVGSTYNYLGRKTNLMLQAFAKPDLALARKYQFLTGEFLNFVIKLGFGVAQTKAVMTFVSGIPMGPPRLPLVDASEEFIVKAKAKLDSIVWPDGN
SIO_010081: DHX9
subclass of: SO_0000673
so part of: DHX9
location: complement(join(4157613..4157764,4159155..4159194,4160621..4160705,4161504..4161550,4161739..4161887,4162703..4162795,4164037..4164112,4164203..4164260,4165388..4165475,4166624..4166697,4168296..4168360))
location: region:4157613-4168360:-1
so has part: feature:4168296-4168360:-1:exon
so has part: feature:4166624-4166697:-1:exon
so has part: feature:4165388-4165475:-1:exon
so has part: feature:4164203-4164260:-1:exon
so has part: feature:4164037-4164112:-1:exon
so has part: feature:4162703-4162795:-1:exon
so has part: feature:4161739-4161887:-1:exon
so has part: feature:4161504-4161550:-1:exon
so has part: feature:4160621-4160705:-1:exon
so has part: feature:4159155-4159194:-1:exon
so has part: feature:4157613-4157764:-1:exon

XP_050757264.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4168296-4168360:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4166624-4166697:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4165388-4165475:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4164203-4164260:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4164037-4164112:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4162703-4162795:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4161739-4161887:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4161504-4161550:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4160621-4160705:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4159155-4159194:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4157613-4157764:-1:exon

DHX9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: DHX9
product: DExH-box helicase 9, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_050901310.1
SIO_010081: DHX9
subclass of: SO_0000673
so part of: DHX9
location: complement(join(4157685..4157764,4159155..4159194,4160621..4160705,4161739..4161887,4162703..4162795,4164037..4164112,4164203..4164260,4165388..4165475,4166624..4166697,4168296..4168364,4186560..4186602,4186795..4186825,4187819..4187870,4188446..4188495,4188838..4188890,4189350..4189375,4189981..4190073,4190493..4190524,4190919..4190964,4191231..4191270,4191810..4191856,4193159..4193184))
location: region:4157685-4193184:-1
so has part: feature:4193159-4193184:-1:exon
so has part: feature:4191810-4191856:-1:exon
so has part: feature:4191231-4191270:-1:exon
so has part: feature:4190919-4190964:-1:exon
so has part: feature:4190493-4190524:-1:exon
so has part: feature:4189981-4190073:-1:exon
so has part: feature:4189350-4189375:-1:exon
so has part: feature:4188838-4188890:-1:exon
so has part: feature:4188446-4188495:-1:exon
so has part: feature:4187819-4187870:-1:exon
so has part: feature:4186795-4186825:-1:exon
so has part: feature:4186560-4186602:-1:exon
so has part: feature:4168296-4168364:-1:exon
so has part: feature:4166624-4166697:-1:exon
so has part: feature:4165388-4165475:-1:exon
so has part: feature:4164203-4164260:-1:exon
so has part: feature:4164037-4164112:-1:exon
so has part: feature:4162703-4162795:-1:exon
so has part: feature:4161739-4161887:-1:exon
so has part: feature:4160621-4160705:-1:exon
so has part: feature:4159155-4159194:-1:exon
so has part: feature:4157685-4157764:-1:exon

position:4157685:-1
position: 4157685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4193159-4193184:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4191810-4191856:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4191231-4191270:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4190919-4190964:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4190493-4190524:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4189981-4190073:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4189350-4189375:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4188838-4188890:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4188446-4188495:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4187819-4187870:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4186795-4186825:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4186560-4186602:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4168296-4168364:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4166624-4166697:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4165388-4165475:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4164203-4164260:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4164037-4164112:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4162703-4162795:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4161739-4161887:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4160621-4160705:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4159155-4159194:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4157685-4157764:-1:exon

DHX9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: DHX9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent RNA helicase A isoform X6
translation: MSEERTVLSATSLGEEAILKLLYEELRSSMTPGKKLQGLVAATITPMTPDGQINLSVIRKYVDYLVSEQNVKNVFVNGTTGEGLSLNIQERKQLAEEWMRQGKDKLDHVIIHVGALSLPESQELARHAAAIGASGIAAIAPFFFKPTNKDELTAFLQKVASEAPAVPFYYYHIPPLTGVKIRVEELLDGIKERIPTFQGVKFSDTDLLDLAQCINKNEREQFSFLYGVDEYIQLFGPKNQSDVASLCKARPCVSTEVSVSHWGISQLCHQTRFWCCAD
SIO_010081: DHX9
subclass of: SO_0000673
so part of: DHX9
location: complement(join(4157743..4157764,4159155..4159194,4160621..4160705,4161739..4161887,4162703..4162795,4164037..4164112,4164203..4164260,4165388..4165475,4166624..4166697,4168296..4168364,4186560..4186602,4186795..4186825,4187819..4187827))
location: region:4157743-4187827:-1
so has part: feature:4187819-4187827:-1:exon
so has part: feature:4186795-4186825:-1:exon
so has part: feature:4186560-4186602:-1:exon
so has part: feature:4168296-4168364:-1:exon
so has part: feature:4166624-4166697:-1:exon
so has part: feature:4165388-4165475:-1:exon
so has part: feature:4164203-4164260:-1:exon
so has part: feature:4164037-4164112:-1:exon
so has part: feature:4162703-4162795:-1:exon
so has part: feature:4161739-4161887:-1:exon
so has part: feature:4160621-4160705:-1:exon
so has part: feature:4159155-4159194:-1:exon
so has part: feature:4157743-4157764:-1:exon

XP_050757267.1
type: Protein
SIO_000068: ncbiprotein

position:4157743:-1
position: 4157743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4187819-4187827:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4186795-4186825:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4186560-4186602:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4168296-4168364:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4166624-4166697:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4165388-4165475:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4164203-4164260:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4164037-4164112:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4162703-4162795:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4161739-4161887:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4160621-4160705:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4159155-4159194:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4157743-4157764:-1:exon

HEBP2
type: Gene
subclass of: SO_0000704
RO_0002162: 33616
gene: HEBP2
note: heme binding protein 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4181103..4187503
location: region:4181103-4187503:1
so has part: feature:4181103-4187503:1:exon
subclass of: SO_0000010

127019312
type: Gene
SIO_000068: ncbigene

position:4181103:1
position: 4181103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4187503:1
position: 4187503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4181103-4187503:1:exon

HEBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: HEBP2
product: heme binding protein 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_050901311.1
SIO_010081: HEBP2
subclass of: SO_0000673
so part of: HEBP2
location: join(4181103..4181107,4183417..4183501,4183885..4184020,4184275..4184440,4185141..4187503)
location: region:4181103-4187503:1
so has part: feature:4181103-4181107:1:exon
so has part: feature:4183417-4183501:1:exon
so has part: feature:4183885-4184020:1:exon
so has part: feature:4184275-4184440:1:exon
so has part: feature:4185141-4187503:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4181103-4181107:1:exon

position:4181107:1
position: 4181107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4183417-4183501:1:exon

position:4183417:1
position: 4183417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4183501:1
position: 4183501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4183885-4184020:1:exon

position:4183885:1
position: 4183885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4184020:1
position: 4184020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4184275-4184440:1:exon

position:4184275:1
position: 4184275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4184440:1
position: 4184440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4185141-4187503:1:exon

position:4185141:1
position: 4185141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HEBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: HEBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heme-binding protein 2
translation: MIKSFKQTFLSLDLQSPRWSSAETMAKDYELRQYETAKWVSTVIRGETQKEAMRQGFWKLFHYIQGKNEKEMKIDMTVPVTCLIKSGCTDFKISFFVPFEHQDSPPQPTDSDVFTEERKAAAIFVRSFGGFASPEKYAEEAEVLARILRNRGQPFHEDFFYTAGYDSPFKLFNRHNEVWYFKK
SIO_010081: HEBP2
subclass of: SO_0000673
so part of: HEBP2
location: join(4183427..4183501,4183885..4184020,4184275..4184440,4185141..4185315)
location: region:4183427-4185315:1
so has part: feature:4183427-4183501:1:exon
so has part: feature:4183885-4184020:1:exon
so has part: feature:4184275-4184440:1:exon
so has part: feature:4185141-4185315:1:exon

XP_050757268.1
type: Protein
SIO_000068: ncbiprotein

position:4183427:1
position: 4183427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4185315:1
position: 4185315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4183427-4183501:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4183885-4184020:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4184275-4184440:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4185141-4185315:1:exon

DHX9
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 33616
gene: DHX9
product: DExH-box helicase 9, transcript variant X9
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007766887.1
SIO_010081: DHX9
so part of: DHX9
location: complement(join(4186267..4186392,4186560..4186825,4187819..4187870,4188446..4188495,4188838..4188890,4189350..4189375,4189981..4190073,4190493..4190524,4190919..4190964,4191231..4191270,4191810..4191856,4193159..4193184))
location: region:4186267-4193184:-1
so has part: feature:4193159-4193184:-1:exon
so has part: feature:4191810-4191856:-1:exon
so has part: feature:4191231-4191270:-1:exon
so has part: feature:4190919-4190964:-1:exon
so has part: feature:4190493-4190524:-1:exon
so has part: feature:4189981-4190073:-1:exon
so has part: feature:4189350-4189375:-1:exon
so has part: feature:4188838-4188890:-1:exon
so has part: feature:4188446-4188495:-1:exon
so has part: feature:4187819-4187870:-1:exon
so has part: feature:4186560-4186825:-1:exon
so has part: feature:4186267-4186392:-1:exon

position:4186267:-1
position: 4186267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4193159-4193184:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4191810-4191856:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4191231-4191270:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4190919-4190964:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4190493-4190524:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4189981-4190073:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4189350-4189375:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4188838-4188890:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4188446-4188495:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4187819-4187870:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4186560-4186825:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4186267-4186392:-1:exon

position:4186392:-1
position: 4186392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC127019435
type: Gene
subclass of: SO_0000704
RO_0002162: 33616
gene: LOC127019435
note: small nucleolar RNA SNORD47; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(4186670..4186745)
location: region:4186670-4186745:-1
so has part: feature:4186670-4186745:-1:exon
subclass of: SO_0000578

127019435
type: Gene
SIO_000068: ncbigene

position:4186670:-1
position: 4186670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4186745:-1
position: 4186745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4186670-4186745:-1:exon

LOC127019435
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 33616
nc RNA class: snoRNA
gene: LOC127019435
product: small nucleolar RNA SNORD47
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00281
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_007766926.1
SIO_010081: LOC127019435
subclass of: SO_0000673
so part of: LOC127019435
location: complement(4186670..4186745)
location: region:4186670-4186745:-1
so has part: feature:4186670-4186745:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4186670-4186745:-1:exon

LOC127019427
type: Gene
subclass of: SO_0000704
RO_0002162: 33616
gene: LOC127019427
note: small nucleolar RNA SNORD79; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(4187939..4188017)
location: region:4187939-4188017:-1
so has part: feature:4187939-4188017:-1:exon
subclass of: SO_0000578

127019427
type: Gene
SIO_000068: ncbigene

position:4187939:-1
position: 4187939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4188017:-1
position: 4188017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4187939-4188017:-1:exon

LOC127019427
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 33616
nc RNA class: snoRNA
gene: LOC127019427
product: small nucleolar RNA SNORD79
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00152
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_007766918.1
SIO_010081: LOC127019427
subclass of: SO_0000673
so part of: LOC127019427
location: complement(4187939..4188017)
location: region:4187939-4188017:-1
so has part: feature:4187939-4188017:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4187939-4188017:-1:exon

LOC127019437
type: Gene
subclass of: SO_0000704
RO_0002162: 33616
gene: LOC127019437
note: small nucleolar RNA snR60/Z15/Z230/Z193/J17; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(4190350..4190435)
location: region:4190350-4190435:-1
so has part: feature:4190350-4190435:-1:exon
subclass of: SO_0000578

127019437
type: Gene
SIO_000068: ncbigene

position:4190350:-1
position: 4190350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4190435:-1
position: 4190435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4190350-4190435:-1:exon

LOC127019437
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 33616
nc RNA class: snoRNA
gene: LOC127019437
product: small nucleolar RNA snR60/Z15/Z230/Z193/J17
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00309
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_007766928.1
SIO_010081: LOC127019437
subclass of: SO_0000673
so part of: LOC127019437
location: complement(4190350..4190435)
location: region:4190350-4190435:-1
so has part: feature:4190350-4190435:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4190350-4190435:-1:exon

LOC127019438
type: Gene
subclass of: SO_0000704
RO_0002162: 33616
gene: LOC127019438
note: small nucleolar RNA snR60/Z15/Z230/Z193/J17; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(4190607..4190689)
location: region:4190607-4190689:-1
so has part: feature:4190607-4190689:-1:exon
subclass of: SO_0000578

127019438
type: Gene
SIO_000068: ncbigene

position:4190607:-1
position: 4190607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4190689:-1
position: 4190689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4190607-4190689:-1:exon

LOC127019438
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 33616
nc RNA class: snoRNA
gene: LOC127019438
product: small nucleolar RNA snR60/Z15/Z230/Z193/J17
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00309
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_007766929.1
SIO_010081: LOC127019438
subclass of: SO_0000673
so part of: LOC127019438
location: complement(4190607..4190689)
location: region:4190607-4190689:-1
so has part: feature:4190607-4190689:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4190607-4190689:-1:exon

LOC127019426
type: Gene
subclass of: SO_0000704
RO_0002162: 33616
gene: LOC127019426
note: small nucleolar RNA SNORD24; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(4191034..4191115)
location: region:4191034-4191115:-1
so has part: feature:4191034-4191115:-1:exon
subclass of: SO_0000578

127019426
type: Gene
SIO_000068: ncbigene

position:4191034:-1
position: 4191034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4191115:-1
position: 4191115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4191034-4191115:-1:exon

LOC127019426
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 33616
nc RNA class: snoRNA
gene: LOC127019426
product: small nucleolar RNA SNORD24
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00069
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_007766917.1
SIO_010081: LOC127019426
subclass of: SO_0000673
so part of: LOC127019426
location: complement(4191034..4191115)
location: region:4191034-4191115:-1
so has part: feature:4191034-4191115:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4191034-4191115:-1:exon

LOC127019442
type: Gene
subclass of: SO_0000704
RO_0002162: 33616
gene: LOC127019442
note: small nucleolar RNA SNORD75; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(4191349..4191415)
location: region:4191349-4191415:-1
so has part: feature:4191349-4191415:-1:exon
subclass of: SO_0000578

127019442
type: Gene
SIO_000068: ncbigene

position:4191349:-1
position: 4191349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4191415:-1
position: 4191415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4191349-4191415:-1:exon

LOC127019442
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 33616
nc RNA class: snoRNA
gene: LOC127019442
product: small nucleolar RNA SNORD75
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00612
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_007766932.1
SIO_010081: LOC127019442
subclass of: SO_0000673
so part of: LOC127019442
location: complement(4191349..4191415)
location: region:4191349-4191415:-1
so has part: feature:4191349-4191415:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4191349-4191415:-1:exon

LOC127019436
type: Gene
subclass of: SO_0000704
RO_0002162: 33616
gene: LOC127019436
note: small nucleolar RNA SNORD74; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(4192175..4192252)
location: region:4192175-4192252:-1
so has part: feature:4192175-4192252:-1:exon
subclass of: SO_0000578

127019436
type: Gene
SIO_000068: ncbigene

position:4192175:-1
position: 4192175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4192252:-1
position: 4192252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4192175-4192252:-1:exon

LOC127019436
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 33616
nc RNA class: snoRNA
gene: LOC127019436
product: small nucleolar RNA SNORD74
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00284
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_007766927.1
SIO_010081: LOC127019436
subclass of: SO_0000673
so part of: LOC127019436
location: complement(4192175..4192252)
location: region:4192175-4192252:-1
so has part: feature:4192175-4192252:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4192175-4192252:-1:exon

ZBTB37
type: Gene
subclass of: SO_0000704
RO_0002162: 33616
gene: ZBTB37
note: zinc finger and BTB domain containing 37; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4194524..4202427
location: region:4194524-4202427:1
so has part: feature:4194524-4202427:1:exon
subclass of: SO_0000010

127019289
type: Gene
SIO_000068: ncbigene

position:4194524:1
position: 4194524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4202427:1
position: 4202427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4194524-4202427:1:exon

ZBTB37
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: ZBTB37
product: zinc finger and BTB domain containing 37, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
transcript id: XM_050901278.1
SIO_010081: ZBTB37
subclass of: SO_0000673
so part of: ZBTB37
location: join(4194524..4194535,4197226..4198175,4199576..4199675,4201938..4202427)
location: region:4194524-4202427:1
so has part: feature:4194524-4194535:1:exon
so has part: feature:4197226-4198175:1:exon
so has part: feature:4199576-4199675:1:exon
so has part: feature:4201938-4202427:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4194524-4194535:1:exon

position:4194535:1
position: 4194535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4197226-4198175:1:exon

position:4197226:1
position: 4197226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4198175:1
position: 4198175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4199576-4199675:1:exon

position:4199576:1
position: 4199576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4199675:1
position: 4199675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4201938-4202427:1:exon

position:4201938:1
position: 4201938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZBTB37
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: ZBTB37
product: zinc finger and BTB domain containing 37, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
transcript id: XM_050901277.1
SIO_010081: ZBTB37
subclass of: SO_0000673
so part of: ZBTB37
location: join(4195694..4195723,4197223..4198175,4199576..4199675,4201938..4202427)
location: region:4195694-4202427:1
so has part: feature:4195694-4195723:1:exon
so has part: feature:4197223-4198175:1:exon
so has part: feature:4199576-4199675:1:exon
so has part: feature:4201938-4202427:1:exon

position:4195694:1
position: 4195694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4195694-4195723:1:exon

position:4195723:1
position: 4195723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4197223-4198175:1:exon

position:4197223:1
position: 4197223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4199576-4199675:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4201938-4202427:1:exon

ZBTB37
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: ZBTB37
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 37
translation: MEKSGNIQLEIPDFSNSVLSHLNQLRMQGRLCDIVVNVQGQAFRAHKVVLAASSPYFRDHMSLNEMSTVSISVIKNPSVFEQLLSFCYTGRICLQLADIISYLTAASFLQMQHIIDKCTQILEGIHFKINVAEVEAELSQTRTKHQERPPESHRVTPNLNRSLSPRHNTPKGSRLGQVSTVLDIRELSPPEESTSPQIIEQSSDVESREPILRINRAGQWYVETGMGDRGGRNDDDVRVLGGVRIKTENLEEWLGAEHQPSGEDGSSAEEVTAMVIDTTGHGSLGQEAYALGSSGAKVVRPTSSEIDRFSPSGSMVAVTERYRSKSESPGRMDEPKQPSSQGEESAMLGVSGYVEYLREQEVSERWFRYNPRLTCIYCAKSFNQKGSLDRHMRLHMGITPFVCRMCGKKYTRKDQLEYHIRKHTGNKPFHCHVCGKSFPFQAILNQHFRKNHPGCMPLEGPHSISPETTVTSRGQAEEESPPQEEAVAVGETAQGSVSTTGPD
SIO_010081: ZBTB37
subclass of: SO_0000673
so part of: ZBTB37
location: join(4197253..4198175,4199576..4199675,4201938..4202426)
location: region:4197253-4202426:1
so has part: feature:4197253-4198175:1:exon
so has part: feature:4199576-4199675:1:exon
so has part: feature:4201938-4202426:1:exon

XP_050757234.1
type: Protein
SIO_000068: ncbiprotein

position:4197253:1
position: 4197253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4202426:1
position: 4202426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4197253-4198175:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4199576-4199675:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4201938-4202426:1:exon

ZBTB37
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: ZBTB37
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 37
translation: MEKSGNIQLEIPDFSNSVLSHLNQLRMQGRLCDIVVNVQGQAFRAHKVVLAASSPYFRDHMSLNEMSTVSISVIKNPSVFEQLLSFCYTGRICLQLADIISYLTAASFLQMQHIIDKCTQILEGIHFKINVAEVEAELSQTRTKHQERPPESHRVTPNLNRSLSPRHNTPKGSRLGQVSTVLDIRELSPPEESTSPQIIEQSSDVESREPILRINRAGQWYVETGMGDRGGRNDDDVRVLGGVRIKTENLEEWLGAEHQPSGEDGSSAEEVTAMVIDTTGHGSLGQEAYALGSSGAKVVRPTSSEIDRFSPSGSMVAVTERYRSKSESPGRMDEPKQPSSQGEESAMLGVSGYVEYLREQEVSERWFRYNPRLTCIYCAKSFNQKGSLDRHMRLHMGITPFVCRMCGKKYTRKDQLEYHIRKHTGNKPFHCHVCGKSFPFQAILNQHFRKNHPGCMPLEGPHSISPETTVTSRGQAEEESPPQEEAVAVGETAQGSVSTTGPD
SIO_010081: ZBTB37
subclass of: SO_0000673
so part of: ZBTB37
location: join(4197253..4198175,4199576..4199675,4201938..4202426)
location: region:4197253-4202426:1
so has part: feature:4197253-4198175:1:exon
so has part: feature:4199576-4199675:1:exon
so has part: feature:4201938-4202426:1:exon

XP_050757235.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4197253-4198175:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4199576-4199675:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4201938-4202426:1:exon

RC3H1
type: Gene
subclass of: SO_0000704
RO_0002162: 33616
gene: RC3H1
note: ring finger and CCCH-type domains 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4220388..4300715)
location: region:4220388-4300715:-1
so has part: feature:4220388-4300715:-1:exon
subclass of: SO_0000010

127019352
type: Gene
SIO_000068: ncbigene

position:4220388:-1
position: 4220388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4300715:-1
position: 4300715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4220388-4300715:-1:exon

RC3H1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: RC3H1
product: ring finger and CCCH-type domains 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins
transcript id: XM_050901352.1
SIO_010081: RC3H1
subclass of: SO_0000673
so part of: RC3H1
location: complement(join(4220388..4220670,4220889..4220953,4221302..4221695,4221780..4221917,4222259..4222474,4224749..4225127,4242182..4242297,4242906..4243076,4245082..4245217,4245340..4245430,4246572..4246782,4250012..4250182,4250806..4250937,4252064..4252440,4253954..4254171,4254494..4254775,4258246..4258358,4260420..4260538,4262700..4262832,4264631..4264831,4265680..4265855,4266992..4267231,4268508..4268628,4276061..4276428,4300662..4300715))
location: region:4220388-4300715:-1
so has part: feature:4300662-4300715:-1:exon
so has part: feature:4276061-4276428:-1:exon
so has part: feature:4268508-4268628:-1:exon
so has part: feature:4266992-4267231:-1:exon
so has part: feature:4265680-4265855:-1:exon
so has part: feature:4264631-4264831:-1:exon
so has part: feature:4262700-4262832:-1:exon
so has part: feature:4260420-4260538:-1:exon
so has part: feature:4258246-4258358:-1:exon
so has part: feature:4254494-4254775:-1:exon
so has part: feature:4253954-4254171:-1:exon
so has part: feature:4252064-4252440:-1:exon
so has part: feature:4250806-4250937:-1:exon
so has part: feature:4250012-4250182:-1:exon
so has part: feature:4246572-4246782:-1:exon
so has part: feature:4245340-4245430:-1:exon
so has part: feature:4245082-4245217:-1:exon
so has part: feature:4242906-4243076:-1:exon
so has part: feature:4242182-4242297:-1:exon
so has part: feature:4224749-4225127:-1:exon
so has part: feature:4222259-4222474:-1:exon
so has part: feature:4221780-4221917:-1:exon
so has part: feature:4221302-4221695:-1:exon
so has part: feature:4220889-4220953:-1:exon
so has part: feature:4220388-4220670:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4300662-4300715:-1:exon

position:4300662:-1
position: 4300662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4276061-4276428:-1:exon

position:4276061:-1
position: 4276061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4276428:-1
position: 4276428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4268508-4268628:-1:exon

position:4268508:-1
position: 4268508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4268628:-1
position: 4268628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4266992-4267231:-1:exon

position:4266992:-1
position: 4266992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4267231:-1
position: 4267231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4265680-4265855:-1:exon

position:4265680:-1
position: 4265680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4265855:-1
position: 4265855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4264631-4264831:-1:exon

position:4264631:-1
position: 4264631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4264831:-1
position: 4264831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4262700-4262832:-1:exon

position:4262700:-1
position: 4262700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4262832:-1
position: 4262832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4260420-4260538:-1:exon

position:4260420:-1
position: 4260420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4260538:-1
position: 4260538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4258246-4258358:-1:exon

position:4258246:-1
position: 4258246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4258358:-1
position: 4258358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4254494-4254775:-1:exon

position:4254494:-1
position: 4254494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4254775:-1
position: 4254775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4253954-4254171:-1:exon

position:4253954:-1
position: 4253954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4254171:-1
position: 4254171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4252064-4252440:-1:exon

position:4252064:-1
position: 4252064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4252440:-1
position: 4252440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4250806-4250937:-1:exon

position:4250806:-1
position: 4250806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4250937:-1
position: 4250937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4250012-4250182:-1:exon

position:4250012:-1
position: 4250012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4250182:-1
position: 4250182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4246572-4246782:-1:exon

position:4246572:-1
position: 4246572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4246782:-1
position: 4246782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4245340-4245430:-1:exon

position:4245340:-1
position: 4245340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4245430:-1
position: 4245430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4245082-4245217:-1:exon

position:4245082:-1
position: 4245082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4245217:-1
position: 4245217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4242906-4243076:-1:exon

position:4242906:-1
position: 4242906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4243076:-1
position: 4243076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4242182-4242297:-1:exon

position:4242182:-1
position: 4242182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4242297:-1
position: 4242297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4224749-4225127:-1:exon

position:4224749:-1
position: 4224749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4225127:-1
position: 4225127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4222259-4222474:-1:exon

position:4222259:-1
position: 4222259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4222474:-1
position: 4222474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4221780-4221917:-1:exon

position:4221780:-1
position: 4221780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4221917:-1
position: 4221917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4221302-4221695:-1:exon

position:4221302:-1
position: 4221302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4221695:-1
position: 4221695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:4220889-4220953:-1:exon

position:4220889:-1
position: 4220889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4220953:-1
position: 4220953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:4220388-4220670:-1:exon

position:4220670:-1
position: 4220670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RC3H1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: RC3H1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roquin-1 isoform X1
translation: MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTDIELLPVNSALLQLVGAQVPEQQPITLCSGAEDTKHYEEGKKCVEELALYLKPLSSARGVGLNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLSSNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAPDQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELLANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGTDQQQPPQHSKYKTYMCRDMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSGAILSEEGGVDLPNRKTSALPNGIVSTGSTVTQLISRGTDSGYETALKPGKMDHLSSSAPGSPPDLLESVPKSSISALPVNPHPVPTRAPTDLPSVSVTKQLQMVPRGSQFHNTQQADMFYQDPRGAAPPFEPAPYQQGVYYPTQSMSRFVRPPPSAPEPGPPYLDHYPPYLQDRVVSPQYTQPQQYPPMGQPIYPPHYDSRRVYPPVQPYQREEIVRGSPVPIEIPQAAVPSYVPESRDRYQQTEGYCPVAPHLGQIRPSCHRPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSPTLPHPFHSEEVFVFVQYLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAARSVEMANVDSKAMRDQRLDMQRRAAETGDDDLIPFGDRPTVSRFGAISRTSKAMYQNSGPMQAMAVQGATTKSIISDYNPYGTHGGWGGSPYSPHQNIPSQGRFNDRERLSMSDVAGHGKQLPSAEREQQLRMELQQVDHQISQQTQMRGLEAVSNRLLLQREATTLAGQPQPPPPPPKWPGMISSEQLSLELHQVEREIGKRTRELSMESQSSLDIKNKLGTTKQTENGQLEPQSKVPAEDLALTFRTMHLFVVCLFSVWGLAAPEHYVVEDICTAKPRDIPVNPICIYRNPEKKPQEGEGQEPGKGKLPESTNPRVWELSKANSRFAVVFYKYLADSKDNGENIFMSPLSISTAFAMTKLGACGRTLQQLMEVFRFDTISEKTSDQIHFFFAKLNCRLYKKANKSSELVSANRLFGEKSLVFNETYQNISEIVYGAKLWPLNFKEKPEFSRKIINEWVANKTEKRITEVIPERGIDDLTVLVLVNTIYFKGHWKSEFPAPNTKLDLFHKANGEACKVPIMYQESKFHHASIAQDKVQVLELPYKGDDITMVLVLPNAGTPLVEVERDLTSEKLQDWIDSMTEVSLFVYLPRFRIEDSFSVKEKLRKMGLEDLFSPENARLPGIIAEGRTDLYVSEAFHKAFLEVNEEGSEASAATAVTVSGRSFPMNRIIFNANRPFLLFIREAALNTVIFMGRIADPCS
SIO_010081: RC3H1
subclass of: SO_0000673
so part of: RC3H1
location: complement(join(4220497..4220670,4220889..4220953,4221302..4221695,4221780..4221917,4222259..4222474,4224749..4225127,4242182..4242297,4242906..4243076,4245082..4245217,4245340..4245430,4246572..4246782,4250012..4250182,4250806..4250937,4252064..4252440,4253954..4254171,4254494..4254775,4258246..4258358,4260420..4260538,4262700..4262832,4264631..4264831,4265680..4265855,4266992..4267231,4268508..4268628,4276061..4276291))
location: region:4220497-4276291:-1
so has part: feature:4276061-4276291:-1:exon
so has part: feature:4268508-4268628:-1:exon
so has part: feature:4266992-4267231:-1:exon
so has part: feature:4265680-4265855:-1:exon
so has part: feature:4264631-4264831:-1:exon
so has part: feature:4262700-4262832:-1:exon
so has part: feature:4260420-4260538:-1:exon
so has part: feature:4258246-4258358:-1:exon
so has part: feature:4254494-4254775:-1:exon
so has part: feature:4253954-4254171:-1:exon
so has part: feature:4252064-4252440:-1:exon
so has part: feature:4250806-4250937:-1:exon
so has part: feature:4250012-4250182:-1:exon
so has part: feature:4246572-4246782:-1:exon
so has part: feature:4245340-4245430:-1:exon
so has part: feature:4245082-4245217:-1:exon
so has part: feature:4242906-4243076:-1:exon
so has part: feature:4242182-4242297:-1:exon
so has part: feature:4224749-4225127:-1:exon
so has part: feature:4222259-4222474:-1:exon
so has part: feature:4221780-4221917:-1:exon
so has part: feature:4221302-4221695:-1:exon
so has part: feature:4220889-4220953:-1:exon
so has part: feature:4220497-4220670:-1:exon

XP_050757309.1
type: Protein
SIO_000068: ncbiprotein

position:4220497:-1
position: 4220497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4276291:-1
position: 4276291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4276061-4276291:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4268508-4268628:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4266992-4267231:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4265680-4265855:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4264631-4264831:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4262700-4262832:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4260420-4260538:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4258246-4258358:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4254494-4254775:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4253954-4254171:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4252064-4252440:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4250806-4250937:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4250012-4250182:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4246572-4246782:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4245340-4245430:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4245082-4245217:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4242906-4243076:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4242182-4242297:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4224749-4225127:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4222259-4222474:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4221780-4221917:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4221302-4221695:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4220889-4220953:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4220497-4220670:-1:exon

RC3H1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: RC3H1
product: ring finger and CCCH-type domains 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_050901354.1
SIO_010081: RC3H1
subclass of: SO_0000673
so part of: RC3H1
location: complement(join(4238818..4240964,4242182..4242297,4242906..4243049,4245082..4245217,4245340..4245430,4246572..4246782,4250012..4250164,4250806..4250937,4252064..4252440,4253954..4254171,4254494..4254775,4258246..4258358,4260420..4260538,4262700..4262832,4264631..4264831,4265680..4265855,4266992..4267231,4268508..4268628,4276061..4276428,4300662..4300715))
location: region:4238818-4300715:-1
so has part: feature:4300662-4300715:-1:exon
so has part: feature:4276061-4276428:-1:exon
so has part: feature:4268508-4268628:-1:exon
so has part: feature:4266992-4267231:-1:exon
so has part: feature:4265680-4265855:-1:exon
so has part: feature:4264631-4264831:-1:exon
so has part: feature:4262700-4262832:-1:exon
so has part: feature:4260420-4260538:-1:exon
so has part: feature:4258246-4258358:-1:exon
so has part: feature:4254494-4254775:-1:exon
so has part: feature:4253954-4254171:-1:exon
so has part: feature:4252064-4252440:-1:exon
so has part: feature:4250806-4250937:-1:exon
so has part: feature:4250012-4250164:-1:exon
so has part: feature:4246572-4246782:-1:exon
so has part: feature:4245340-4245430:-1:exon
so has part: feature:4245082-4245217:-1:exon
so has part: feature:4242906-4243049:-1:exon
so has part: feature:4242182-4242297:-1:exon
so has part: feature:4238818-4240964:-1:exon

position:4238818:-1
position: 4238818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4300662-4300715:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4276061-4276428:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4268508-4268628:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4266992-4267231:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4265680-4265855:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4264631-4264831:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4262700-4262832:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4260420-4260538:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4258246-4258358:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4254494-4254775:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4253954-4254171:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4252064-4252440:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4250806-4250937:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4250012-4250164:-1:exon

position:4250164:-1
position: 4250164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4246572-4246782:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4245340-4245430:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4245082-4245217:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4242906-4243049:-1:exon

position:4243049:-1
position: 4243049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4242182-4242297:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4238818-4240964:-1:exon

position:4240964:-1
position: 4240964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RC3H1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: RC3H1
product: ring finger and CCCH-type domains 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_050901353.1
SIO_010081: RC3H1
subclass of: SO_0000673
so part of: RC3H1
location: complement(join(4238818..4240964,4242182..4242297,4242906..4243076,4245082..4245217,4245340..4245430,4246572..4246782,4250012..4250164,4250806..4250937,4252064..4252440,4253954..4254171,4254494..4254775,4258246..4258358,4260420..4260538,4262700..4262832,4264631..4264831,4265680..4265855,4266992..4267231,4268508..4268628,4276061..4276428,4300662..4300715))
location: region:4238818-4300715:-1
so has part: feature:4300662-4300715:-1:exon
so has part: feature:4276061-4276428:-1:exon
so has part: feature:4268508-4268628:-1:exon
so has part: feature:4266992-4267231:-1:exon
so has part: feature:4265680-4265855:-1:exon
so has part: feature:4264631-4264831:-1:exon
so has part: feature:4262700-4262832:-1:exon
so has part: feature:4260420-4260538:-1:exon
so has part: feature:4258246-4258358:-1:exon
so has part: feature:4254494-4254775:-1:exon
so has part: feature:4253954-4254171:-1:exon
so has part: feature:4252064-4252440:-1:exon
so has part: feature:4250806-4250937:-1:exon
so has part: feature:4250012-4250164:-1:exon
so has part: feature:4246572-4246782:-1:exon
so has part: feature:4245340-4245430:-1:exon
so has part: feature:4245082-4245217:-1:exon
so has part: feature:4242906-4243076:-1:exon
so has part: feature:4242182-4242297:-1:exon
so has part: feature:4238818-4240964:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4300662-4300715:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4276061-4276428:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4268508-4268628:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4266992-4267231:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4265680-4265855:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4264631-4264831:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4262700-4262832:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4260420-4260538:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4258246-4258358:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4254494-4254775:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4253954-4254171:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4252064-4252440:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4250806-4250937:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4250012-4250164:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4246572-4246782:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4245340-4245430:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4245082-4245217:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4242906-4243076:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4242182-4242297:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4238818-4240964:-1:exon

RC3H1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: RC3H1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roquin-1 isoform X3
translation: MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTDIELLPVNSALLQLVGAQVPEQQPITLCSGAEDTKHYEEGKKCVEELALYLKPLSSARGVGLNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLSSNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAPDQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELLANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGTDQQQPPQHSKYKTYMCRDMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSGAILSEEGGVDLPNRKTSALPNGIVSTGSTVTQLISRGTDSGYETALKPGKMDHLSSSAPGSPPDLLESVPKSSISALPVNPHPVPTRAPTDLPSVSVTKQLQMVPRGSQFHNTQQADMFYQDPRGAAPPFEPAPYQQGVYYPTQSMSRFVRPPPSAPEPGPPYLDHYPPYLQDRVVSPQYTQPQQYPPMGQPIYPPHYDSRRVYPPVQPYQREEIVRGSPVPIEIPQAAVPSYVPESRDRYQQTEGYCPVAPHLGQIRPSCHRPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSPTLPHPFHSEEYLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAARSVEMANVDSKAMRDQRLDMQRRAAETGDDDLIPFGDRPTVSRFGAISRTSKAMYQNSGPMQAMAVQGATTKSIISDYNPYGTHGGWGGSPYSPHQNIPSQGRFNDRERLSMSDVAGHGKQLPSAEREQQLRMELQQVDHQISQQTQMRGLEREATTLAGQPQPPPPPPKWPGMISSEQLSLELHQVEREIGKRTRELSMESQSSLDIKNKLGTTKQTENGQLEPQSKVPAEDLALTFSDVPNGSALTQENIGLLSNKTASLSLSEDPEGGGDNHDSQRAGVTPTSAP
SIO_010081: RC3H1
subclass of: SO_0000673
so part of: RC3H1
location: complement(join(4240814..4240964,4242182..4242297,4242906..4243049,4245082..4245217,4245340..4245430,4246572..4246782,4250012..4250164,4250806..4250937,4252064..4252440,4253954..4254171,4254494..4254775,4258246..4258358,4260420..4260538,4262700..4262832,4264631..4264831,4265680..4265855,4266992..4267231,4268508..4268628,4276061..4276291))
location: region:4240814-4276291:-1
so has part: feature:4276061-4276291:-1:exon
so has part: feature:4268508-4268628:-1:exon
so has part: feature:4266992-4267231:-1:exon
so has part: feature:4265680-4265855:-1:exon
so has part: feature:4264631-4264831:-1:exon
so has part: feature:4262700-4262832:-1:exon
so has part: feature:4260420-4260538:-1:exon
so has part: feature:4258246-4258358:-1:exon
so has part: feature:4254494-4254775:-1:exon
so has part: feature:4253954-4254171:-1:exon
so has part: feature:4252064-4252440:-1:exon
so has part: feature:4250806-4250937:-1:exon
so has part: feature:4250012-4250164:-1:exon
so has part: feature:4246572-4246782:-1:exon
so has part: feature:4245340-4245430:-1:exon
so has part: feature:4245082-4245217:-1:exon
so has part: feature:4242906-4243049:-1:exon
so has part: feature:4242182-4242297:-1:exon
so has part: feature:4240814-4240964:-1:exon

XP_050757311.1
type: Protein
SIO_000068: ncbiprotein

position:4240814:-1
position: 4240814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4276061-4276291:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4268508-4268628:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4266992-4267231:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4265680-4265855:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4264631-4264831:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4262700-4262832:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4260420-4260538:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4258246-4258358:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4254494-4254775:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4253954-4254171:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4252064-4252440:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4250806-4250937:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4250012-4250164:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4246572-4246782:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4245340-4245430:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4245082-4245217:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4242906-4243049:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4242182-4242297:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4240814-4240964:-1:exon

RC3H1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: RC3H1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roquin-1 isoform X2
translation: MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTDIELLPVNSALLQLVGAQVPEQQPITLCSGAEDTKHYEEGKKCVEELALYLKPLSSARGVGLNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLSSNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAPDQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELLANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGTDQQQPPQHSKYKTYMCRDMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSGAILSEEGGVDLPNRKTSALPNGIVSTGSTVTQLISRGTDSGYETALKPGKMDHLSSSAPGSPPDLLESVPKSSISALPVNPHPVPTRAPTDLPSVSVTKQLQMVPRGSQFHNTQQADMFYQDPRGAAPPFEPAPYQQGVYYPTQSMSRFVRPPPSAPEPGPPYLDHYPPYLQDRVVSPQYTQPQQYPPMGQPIYPPHYDSRRVYPPVQPYQREEIVRGSPVPIEIPQAAVPSYVPESRDRYQQTEGYCPVAPHLGQIRPSCHRPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSPTLPHPFHSEEYLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAARSVEMANVDSKAMRDQRLDMQRRAAETGDDDLIPFGDRPTVSRFGAISRTSKAMYQNSGPMQAMAVQGATTKSIISDYNPYGTHGGWGGSPYSPHQNIPSQGRFNDRERLSMSDVAGHGKQLPSAEREQQLRMELQQVDHQISQQTQMRGLEAVSNRLLLQREATTLAGQPQPPPPPPKWPGMISSEQLSLELHQVEREIGKRTRELSMESQSSLDIKNKLGTTKQTENGQLEPQSKVPAEDLALTFSDVPNGSALTQENIGLLSNKTASLSLSEDPEGGGDNHDSQRAGVTPTSAP
SIO_010081: RC3H1
subclass of: SO_0000673
so part of: RC3H1
location: complement(join(4240814..4240964,4242182..4242297,4242906..4243076,4245082..4245217,4245340..4245430,4246572..4246782,4250012..4250164,4250806..4250937,4252064..4252440,4253954..4254171,4254494..4254775,4258246..4258358,4260420..4260538,4262700..4262832,4264631..4264831,4265680..4265855,4266992..4267231,4268508..4268628,4276061..4276291))
location: region:4240814-4276291:-1
so has part: feature:4276061-4276291:-1:exon
so has part: feature:4268508-4268628:-1:exon
so has part: feature:4266992-4267231:-1:exon
so has part: feature:4265680-4265855:-1:exon
so has part: feature:4264631-4264831:-1:exon
so has part: feature:4262700-4262832:-1:exon
so has part: feature:4260420-4260538:-1:exon
so has part: feature:4258246-4258358:-1:exon
so has part: feature:4254494-4254775:-1:exon
so has part: feature:4253954-4254171:-1:exon
so has part: feature:4252064-4252440:-1:exon
so has part: feature:4250806-4250937:-1:exon
so has part: feature:4250012-4250164:-1:exon
so has part: feature:4246572-4246782:-1:exon
so has part: feature:4245340-4245430:-1:exon
so has part: feature:4245082-4245217:-1:exon
so has part: feature:4242906-4243076:-1:exon
so has part: feature:4242182-4242297:-1:exon
so has part: feature:4240814-4240964:-1:exon

XP_050757310.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4276061-4276291:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4268508-4268628:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4266992-4267231:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4265680-4265855:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4264631-4264831:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4262700-4262832:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4260420-4260538:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4258246-4258358:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4254494-4254775:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4253954-4254171:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4252064-4252440:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4250806-4250937:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4250012-4250164:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4246572-4246782:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4245340-4245430:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4245082-4245217:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4242906-4243076:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4242182-4242297:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4240814-4240964:-1:exon

LOC127019029
type: Gene
subclass of: SO_0000704
RO_0002162: 33616
gene: LOC127019029
note: uncharacterized LOC127019029; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4300981..4309012
location: region:4300981-4309012:1
so has part: feature:4300981-4309012:1:exon
subclass of: SO_0000011

127019029
type: Gene
SIO_000068: ncbigene

position:4300981:1
position: 4300981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4309012:1
position: 4309012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4300981-4309012:1:exon

LOC127019029
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 33616
nc RNA class: lncRNA
gene: LOC127019029
product: uncharacterized LOC127019029
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_007766852.1
SIO_010081: LOC127019029
subclass of: SO_0000673
so part of: LOC127019029
location: join(4300981..4301065,4301428..4301585,4303213..4303305,4305153..4305232,4307420..4307477,4308630..4308833,4308928..4309012)
location: region:4300981-4309012:1
so has part: feature:4300981-4301065:1:exon
so has part: feature:4301428-4301585:1:exon
so has part: feature:4303213-4303305:1:exon
so has part: feature:4305153-4305232:1:exon
so has part: feature:4307420-4307477:1:exon
so has part: feature:4308630-4308833:1:exon
so has part: feature:4308928-4309012:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4300981-4301065:1:exon

position:4301065:1
position: 4301065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4301428-4301585:1:exon

position:4301428:1
position: 4301428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4301585:1
position: 4301585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4303213-4303305:1:exon

position:4303213:1
position: 4303213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4303305:1
position: 4303305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4305153-4305232:1:exon

position:4305153:1
position: 4305153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4305232:1
position: 4305232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4307420-4307477:1:exon

position:4307420:1
position: 4307420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4307477:1
position: 4307477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4308630-4308833:1:exon

position:4308630:1
position: 4308630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4308833:1
position: 4308833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4308928-4309012:1:exon

position:4308928:1
position: 4308928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC127019030
type: Gene
subclass of: SO_0000704
RO_0002162: 33616
gene: LOC127019030
note: uncharacterized LOC127019030; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4311596..4318776
location: region:4311596-4318776:1
so has part: feature:4311596-4318776:1:exon
subclass of: SO_0000011

127019030
type: Gene
SIO_000068: ncbigene

position:4311596:1
position: 4311596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4318776:1
position: 4318776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4311596-4318776:1:exon

LOC127019030
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 33616
nc RNA class: lncRNA
gene: LOC127019030
product: uncharacterized LOC127019030
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_007766853.1
SIO_010081: LOC127019030
subclass of: SO_0000673
so part of: LOC127019030
location: join(4311596..4312160,4313597..4313654,4318636..4318776)
location: region:4311596-4318776:1
so has part: feature:4311596-4312160:1:exon
so has part: feature:4313597-4313654:1:exon
so has part: feature:4318636-4318776:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4311596-4312160:1:exon

position:4312160:1
position: 4312160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4313597-4313654:1:exon

position:4313597:1
position: 4313597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4313654:1
position: 4313654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4318636-4318776:1:exon

position:4318636:1
position: 4318636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RABGAP1L
type: Gene
subclass of: SO_0000704
RO_0002162: 33616
gene: RABGAP1L
note: RAB GTPase activating protein 1 like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4322736..4580078
location: region:4322736-4580078:1
so has part: feature:4322736-4580078:1:exon
subclass of: SO_0000010

127019402
type: Gene
SIO_000068: ncbigene

position:4322736:1
position: 4322736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4580078:1
position: 4580078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4322736-4580078:1:exon

RABGAP1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: RABGAP1L
product: RAB GTPase activating protein 1 like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_050901438.1
SIO_010081: RABGAP1L
subclass of: SO_0000673
so part of: RABGAP1L
location: join(4322736..4322783,4344458..4344625,4345892..4346078,4347915..4348125,4350129..4350303,4351082..4351242,4352082..4352192,4356881..4356947,4358915..4359017,4360675..4360841,4365767..4365911,4379975..4380068,4385654..4385804,4463872..4463985,4473880..4473954,4477493..4477618,4478979..4479122,4492647..4492688,4514574..4514702,4564554..4564646,4571940..4572050,4574499..4574603,4575841..4575924,4576426..4576497,4577887..4578084,4578446..4580078)
location: region:4322736-4580078:1
so has part: feature:4322736-4322783:1:exon
so has part: feature:4344458-4344625:1:exon
so has part: feature:4345892-4346078:1:exon
so has part: feature:4347915-4348125:1:exon
so has part: feature:4350129-4350303:1:exon
so has part: feature:4351082-4351242:1:exon
so has part: feature:4352082-4352192:1:exon
so has part: feature:4356881-4356947:1:exon
so has part: feature:4358915-4359017:1:exon
so has part: feature:4360675-4360841:1:exon
so has part: feature:4365767-4365911:1:exon
so has part: feature:4379975-4380068:1:exon
so has part: feature:4385654-4385804:1:exon
so has part: feature:4463872-4463985:1:exon
so has part: feature:4473880-4473954:1:exon
so has part: feature:4477493-4477618:1:exon
so has part: feature:4478979-4479122:1:exon
so has part: feature:4492647-4492688:1:exon
so has part: feature:4514574-4514702:1:exon
so has part: feature:4564554-4564646:1:exon
so has part: feature:4571940-4572050:1:exon
so has part: feature:4574499-4574603:1:exon
so has part: feature:4575841-4575924:1:exon
so has part: feature:4576426-4576497:1:exon
so has part: feature:4577887-4578084:1:exon
so has part: feature:4578446-4580078:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4322736-4322783:1:exon

position:4322783:1
position: 4322783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4344458-4344625:1:exon

position:4344458:1
position: 4344458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4344625:1
position: 4344625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4345892-4346078:1:exon

position:4345892:1
position: 4345892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4346078:1
position: 4346078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4347915-4348125:1:exon

position:4347915:1
position: 4347915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4348125:1
position: 4348125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4350129-4350303:1:exon

position:4350129:1
position: 4350129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4350303:1
position: 4350303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4351082-4351242:1:exon

position:4351082:1
position: 4351082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4351242:1
position: 4351242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4352082-4352192:1:exon

position:4352082:1
position: 4352082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4352192:1
position: 4352192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4356881-4356947:1:exon

position:4356881:1
position: 4356881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4356947:1
position: 4356947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4358915-4359017:1:exon

position:4358915:1
position: 4358915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4359017:1
position: 4359017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4360675-4360841:1:exon

position:4360675:1
position: 4360675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4360841:1
position: 4360841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4365767-4365911:1:exon

position:4365767:1
position: 4365767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4365911:1
position: 4365911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4379975-4380068:1:exon

position:4379975:1
position: 4379975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4380068:1
position: 4380068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4385654-4385804:1:exon

position:4385654:1
position: 4385654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4385804:1
position: 4385804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4463872-4463985:1:exon

position:4463872:1
position: 4463872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4463985:1
position: 4463985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4473880-4473954:1:exon

position:4473880:1
position: 4473880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4473954:1
position: 4473954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4477493-4477618:1:exon

position:4477493:1
position: 4477493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4477618:1
position: 4477618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4478979-4479122:1:exon

position:4478979:1
position: 4478979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4479122:1
position: 4479122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4492647-4492688:1:exon

position:4492647:1
position: 4492647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4492688:1
position: 4492688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4514574-4514702:1:exon

position:4514574:1
position: 4514574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4514702:1
position: 4514702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4564554-4564646:1:exon

position:4564554:1
position: 4564554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4564646:1
position: 4564646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4571940-4572050:1:exon

position:4571940:1
position: 4571940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4572050:1
position: 4572050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4574499-4574603:1:exon

position:4574499:1
position: 4574499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4574603:1
position: 4574603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4575841-4575924:1:exon

position:4575841:1
position: 4575841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4575924:1
position: 4575924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:4576426-4576497:1:exon

position:4576426:1
position: 4576426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4576497:1
position: 4576497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:4577887-4578084:1:exon

position:4577887:1
position: 4577887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4578084:1
position: 4578084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:4578446-4580078:1:exon

position:4578446:1
position: 4578446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RABGAP1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: RABGAP1L
product: RAB GTPase activating protein 1 like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_050901437.1
SIO_010081: RABGAP1L
subclass of: SO_0000673
so part of: RABGAP1L
location: join(4323561..4323620,4344458..4344625,4345892..4346078,4347915..4348125,4350129..4350303,4351082..4351242,4352082..4352192,4356881..4356947,4358915..4359017,4360675..4360841,4365767..4365911,4379975..4380068,4385654..4385804,4463872..4463985,4473880..4473954,4477493..4477618,4478979..4479122,4492647..4492688,4514574..4514702,4564554..4564646,4571940..4572050,4574499..4574603,4575841..4575924,4576426..4576497,4577887..4578084,4578446..4580078)
location: region:4323561-4580078:1
so has part: feature:4323561-4323620:1:exon
so has part: feature:4344458-4344625:1:exon
so has part: feature:4345892-4346078:1:exon
so has part: feature:4347915-4348125:1:exon
so has part: feature:4350129-4350303:1:exon
so has part: feature:4351082-4351242:1:exon
so has part: feature:4352082-4352192:1:exon
so has part: feature:4356881-4356947:1:exon
so has part: feature:4358915-4359017:1:exon
so has part: feature:4360675-4360841:1:exon
so has part: feature:4365767-4365911:1:exon
so has part: feature:4379975-4380068:1:exon
so has part: feature:4385654-4385804:1:exon
so has part: feature:4463872-4463985:1:exon
so has part: feature:4473880-4473954:1:exon
so has part: feature:4477493-4477618:1:exon
so has part: feature:4478979-4479122:1:exon
so has part: feature:4492647-4492688:1:exon
so has part: feature:4514574-4514702:1:exon
so has part: feature:4564554-4564646:1:exon
so has part: feature:4571940-4572050:1:exon
so has part: feature:4574499-4574603:1:exon
so has part: feature:4575841-4575924:1:exon
so has part: feature:4576426-4576497:1:exon
so has part: feature:4577887-4578084:1:exon
so has part: feature:4578446-4580078:1:exon

position:4323561:1
position: 4323561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4323561-4323620:1:exon

position:4323620:1
position: 4323620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4344458-4344625:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4345892-4346078:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4347915-4348125:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4350129-4350303:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4351082-4351242:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4352082-4352192:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4356881-4356947:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4358915-4359017:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4360675-4360841:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4365767-4365911:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4379975-4380068:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4385654-4385804:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4463872-4463985:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4473880-4473954:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4477493-4477618:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4478979-4479122:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4492647-4492688:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4514574-4514702:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4564554-4564646:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4571940-4572050:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4574499-4574603:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4575841-4575924:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4576426-4576497:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4577887-4578084:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4578446-4580078:1:exon

RABGAP1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: RABGAP1L
product: RAB GTPase activating protein 1 like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_050901439.1
SIO_010081: RABGAP1L
subclass of: SO_0000673
so part of: RABGAP1L
location: join(4323561..4323620,4344458..4344625,4345892..4346078,4347915..4348125,4350129..4350303,4351082..4351242,4352082..4352192,4356881..4356947,4358915..4359017,4360675..4360841,4365767..4365911,4379975..4380068,4385654..4385804,4463872..4463985,4473880..4473954,4477493..4477618,4478979..4479122,4492647..4492688,4514574..4514702,4564554..4564646,4567365..4568109)
location: region:4323561-4568109:1
so has part: feature:4323561-4323620:1:exon
so has part: feature:4344458-4344625:1:exon
so has part: feature:4345892-4346078:1:exon
so has part: feature:4347915-4348125:1:exon
so has part: feature:4350129-4350303:1:exon
so has part: feature:4351082-4351242:1:exon
so has part: feature:4352082-4352192:1:exon
so has part: feature:4356881-4356947:1:exon
so has part: feature:4358915-4359017:1:exon
so has part: feature:4360675-4360841:1:exon
so has part: feature:4365767-4365911:1:exon
so has part: feature:4379975-4380068:1:exon
so has part: feature:4385654-4385804:1:exon
so has part: feature:4463872-4463985:1:exon
so has part: feature:4473880-4473954:1:exon
so has part: feature:4477493-4477618:1:exon
so has part: feature:4478979-4479122:1:exon
so has part: feature:4492647-4492688:1:exon
so has part: feature:4514574-4514702:1:exon
so has part: feature:4564554-4564646:1:exon
so has part: feature:4567365-4568109:1:exon

position:4568109:1
position: 4568109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4323561-4323620:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4344458-4344625:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4345892-4346078:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4347915-4348125:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4350129-4350303:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4351082-4351242:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4352082-4352192:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4356881-4356947:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4358915-4359017:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4360675-4360841:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4365767-4365911:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4379975-4380068:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4385654-4385804:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4463872-4463985:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4473880-4473954:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4477493-4477618:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4478979-4479122:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4492647-4492688:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4514574-4514702:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4564554-4564646:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4567365-4568109:1:exon

position:4567365:1
position: 4567365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RABGAP1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 33616
gene: RABGAP1L
product: RAB GTPase activating protein 1 like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_050901440.1
SIO_010081: RABGAP1L
subclass of: SO_0000673
so part of: RABGAP1L
location: join(4323561..4323620,4344458..4344625,4345892..4346078,4347915..4348125,4350129..4350303,4351082..4351242,4352082..4352192,4356881..4356947,4358915..4359017,4360675..4360841,4365767..4365911,4379975..4380068,4385654..4385804,4463872..4463985,4473880..4473954,4477493..4477618,4478979..4479122,4492647..4492688,4514574..4514702,4564554..4564646,4564928..4565341)
location: region:4323561-4565341:1
so has part: feature:4323561-4323620:1:exon
so has part: feature:4344458-4344625:1:exon
so has part: feature:4345892-4346078:1:exon
so has part: feature:4347915-4348125:1:exon
so has part: feature:4350129-4350303:1:exon
so has part: feature:4351082-4351242:1:exon
so has part: feature:4352082-4352192:1:exon
so has part: feature:4356881-4356947:1:exon
so has part: feature:4358915-4359017:1:exon
so has part: feature:4360675-4360841:1:exon
so has part: feature:4365767-4365911:1:exon
so has part: feature:4379975-4380068:1:exon
so has part: feature:4385654-4385804:1:exon
so has part: feature:4463872-4463985:1:exon
so has part: feature:4473880-4473954:1:exon
so has part: feature:4477493-4477618:1:exon
so has part: feature:4478979-4479122:1:exon
so has part: feature:4492647-4492688:1:exon
so has part: feature:4514574-4514702:1:exon
so has part: feature:4564554-4564646:1:exon
so has part: feature:4564928-4565341:1:exon

position:4565341:1
position: 4565341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4323561-4323620:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4344458-4344625:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4345892-4346078:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4347915-4348125:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4350129-4350303:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4351082-4351242:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4352082-4352192:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4356881-4356947:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4358915-4359017:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4360675-4360841:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4365767-4365911:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4379975-4380068:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4385654-4385804:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4463872-4463985:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4473880-4473954:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4477493-4477618:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4478979-4479122:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4492647-4492688:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4514574-4514702:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4564554-4564646:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4564928-4565341:1:exon

position:4564928:1
position: 4564928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RABGAP1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 33616
gene: RABGAP1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rab GTPase-activating protein 1-like isoform X1
translation: MEVKTSFSKASRIPETVSTLINEDFVLVHQQSEDTSGKDEKPQLKVFSNGDDQLEKAMEEILRDSEKDQNNFTAPREGSSDASSQADGSAGQTNQPSLHLVLDPSTTEISAPRPSSPSEPLEEDSVLFNKLTYLGSTKVSAPRNEPEALHAMATMKSSSQAPSPVTLYVPNIPEGSVRIIDQSSNVEIASFPIYKVLFCVRGQNGTSESDCFAFTESSCGTEEFQIHVFSCEIKEAVSRILYSFSTAFKRSSKQASDHVKDFVLPTPDSDVYTFSVSLEVKEDDGKGNFSPVPKDREKLYFKLKQGIEKKVVITVQQLSNKELAIERCFGMLLSPGRNVRNSDMHLLDMESMGKSSDGKAYVITGMWNPNAPMFLVLNEETPKDKRVFMTVAVDMVVTEVVEPVRFLLETVVRVYPANERFWYFSRKTFTETFYMKLKQSEGKSHTSGGDAIYEVVSLQRESAREEELVSPTSGGGPMSSQEDEAEEESDNELSSGTGDVSKDCPEKILYSWGELLGRWHNNLVVRPNGLSSLVKSGVPEALRAEVWQLLAGCHDNQAMLDKYRVLITMDSAQESVITRDIHRTFPAHDYFKDTEGDGQESLYKICKAYSVYDEDIGYCQGQSFLAAVLLLHMPEEQAFCVFVKIMYDYGLRDLYRNNFEDLHCKFFQLEKLMQEQLPDLHSHFSDLNLEAHMYASQWFLTLFTAKFPLCMVFHIIDLLLCEGMNIIFHVALALLKTSKEDLLQADFEGALKFFRVQLPKRYRAEENARRLMEQACNIKVPTKKLKKYEREYQTMRESQLQQEDPMDRYKRENRRLQEASMRLEQENDDLAHELVTSKIALRNDLDQAEDKADVLNKELLLTKQKLVETEEEKRKQEEETAQLKEVFRKQLEKAESEIKKTTAIIAEYKQICSQLSTRLEKQQAASKDELEVVKGKVMACKHCSEIFSKEGALKLPAVSTENKGIETDDEKDALKKQLREMELELAQTKLQLVEAKCKIQELEHQRGALMNEIQAAKNSWFSKTLNSIKTATGTQPPQQPQPPLPPKEGST
SIO_010081: RABGAP1L
subclass of: SO_0000673
so part of: RABGAP1L
location: join(4344491..4344625,4345892..4346078,4347915..4348125,4350129..4350303,4351082..4351242,4352082..4352192,4356881..4356947,4358915..4359017,4360675..4360841,4365767..4365911,4379975..4380068,4385654..4385804,4463872..4463985,4473880..4473954,4477493..4477618,4478979..4479122,4492647..4492688,4514574..4514702,4564554..4564646,4571940..4572050,4574499..4574603,4575841..4575924,4576426..4576497,4577887..4578084,4578446..4578601)
location: region:4344491-4578601:1
so has part: feature:4344491-4344625:1:exon
so has part: feature:4345892-4346078:1:exon
so has part: feature:4347915-4348125:1:exon
so has part: feature:4350129-4350303:1:exon
so has part: feature:4351082-4351242:1:exon
so has part: feature:4352082-4352192:1:exon
so has part: feature:4356881-4356947:1:exon
so has part: feature:4358915-4359017:1:exon
so has part: feature:4360675-4360841:1:exon
so has part: feature:4365767-4365911:1:exon
so has part: feature:4379975-4380068:1:exon
so has part: feature:4385654-4385804:1:exon
so has part: feature:4463872-4463985:1:exon
so has part: feature:4473880-4473954:1:exon
so has part: feature:4477493-4477618:1:exon
so has part: feature:4478979-4479122:1:exon
so has part: feature:4492647-4492688:1:exon
so has part: feature:4514574-4514702:1:exon
so has part: feature:4564554-4564646:1:exon
so has part: feature:4571940-4572050:1:exon
so has part: feature:4574499-4574603:1:exon
so has part: feature:4575841-4575924:1:exon
so has part: feature:4576426-4576497:1:exon
so has part: feature:4577887-4578084:1:exon
so has part: feature:4578446-4578601:1:exon

XP_050757394.1
type: Protein
SIO_000068: ncbiprotein

position:4344491:1
position: 4344491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4578601:1
position: 4578601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4344491-4344625:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4345892-4346078:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4347915-4348125:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4350129-4350303:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4351082-4351242:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4352082-4352192:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4356881-4356947:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4358915-4359017:1:exon