Simkania negevensis Z chromosome gsn.131, complete sequence.
Bacteria; Chlamydiota; Chlamydiia; Parachlamydiales; Simkaniaceae; Simkania.
Unity in variety--the pan-genome of the Chlamydiae
Submitted (27-MAY-2011) University of Vienna, Department of Computational Systems Biology, Althanstr. 14, 1090 Vienna, AUSTRIA
REFSEQ INFORMATION: The reference sequence is identical to\nFR872582.1.\nAccession number for plasmid pSn in this genome project: FR872581.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/24/2022 02:11:03\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,384\nCDSs (total) :: 2,343\nGenes (coding) :: 2,325\nCDSs (with protein) :: 2,325\nGenes (RNA) :: 41\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 35\nncRNAs :: 3\nPseudo Genes (total) :: 18\nCDSs (without protein) :: 18\nPseudo Genes (ambiguous residues) :: 0 of 18\nPseudo Genes (frameshifted) :: 7 of 18\nPseudo Genes (incomplete) :: 12 of 18\nPseudo Genes (internal stop) :: 2 of 18\nPseudo Genes (multiple problems) :: 2 of 18\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: protein motif:HMM:NF019310.2
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024880.2
COORDINATES: protein motif:HMM:TIGR01733.1
COORDINATES: protein motif:HMM:NF012337.2
COORDINATES: protein motif:HMM:NF025292.2
lipocalin-like domain-containing protein
COORDINATES: protein motif:HMM:NF013786.2
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
4'-phosphopantetheinyl transferase superfamily protein
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF024736.2
COORDINATES: protein motif:HMM:NF013752.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013181819.1
COORDINATES: protein motif:HMM:TIGR00571.1
GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
Dam family site-specific DNA-(adenine-N6)-methyltransferase
COORDINATES: protein motif:HMM:NF024949.2
helix-turn-helix transcriptional regulator
COORDINATES: protein motif:HMM:NF033520.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019334.2
GO:0004672 - protein kinase activity [Evidence IEA]
GO:0006468 - protein phosphorylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012789.2
COORDINATES: protein motif:HMM:NF016169.2
COORDINATES: protein motif:HMM:NF012478.2
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
FKBP-type peptidyl-prolyl cis-trans isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_013942936.1
COORDINATES: protein motif:HMM:NF017760.2
COORDINATES: protein motif:HMM:NF016377.2
COORDINATES: similar to AA sequence:RefSeq:WP_013942376.1
COORDINATES: similar to AA sequence:RefSeq:WP_013942379.1
COORDINATES: protein motif:HMM:NF013862.2
patatin-like phospholipase family protein
COORDINATES: protein motif:HMM:NF013475.2
COORDINATES: similar to AA sequence:RefSeq:WP_006340661.1
GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011176557.1
COORDINATES: protein motif:HMM:NF015627.2
COORDINATES: similar to AA sequence:RefSeq:WP_013181127.1
GO:0004018 - N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015372.2
COORDINATES: similar to AA sequence:RefSeq:WP_013181157.1
COORDINATES: protein motif:HMM:NF012376.2
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013943704.1
COORDINATES: similar to AA sequence:RefSeq:WP_013943703.1
COORDINATES: protein motif:HMM:NF020804.2
small ribosomal subunit Rsm22 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016290599.1
GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]; GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02601.1
autotransporter-associated beta strand repeat-containing protein
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: protein motif:HMM:NF013704.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013181118.1
COORDINATES: protein motif:HMM:NF012568.2
COORDINATES: similar to AA sequence:RefSeq:WP_013183004.1
GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: protein motif:HMM:NF014715.2
GO:0004340 - glucokinase activity [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF017003.2
Lpg1974 family pore-forming outer membrane protein
COORDINATES: protein motif:HMM:NF016951.2
RHS repeat-associated core domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013942425.1
COORDINATES: similar to AA sequence:RefSeq:WP_013944429.1
COORDINATES: similar to AA sequence:RefSeq:WP_013942422.1
COORDINATES: protein motif:HMM:NF006719.0
COORDINATES: protein motif:HMM:NF016011.2
COORDINATES: protein motif:HMM:NF012235.2
ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: protein motif:HMM:NF016357.2
GO:0047355 - CDP-glycerol glycerophosphotransferase activity [Evidence IEA]
CDP-glycerol glycerophosphotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011174639.1
GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01511.1
COORDINATES: protein motif:HMM:NF012485.2
COORDINATES: similar to AA sequence:RefSeq:WP_006342417.1
GO:0015627 - type II protein secretion system complex [Evidence IEA]
GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
COORDINATES: protein motif:HMM:NF012694.2
type II secretion system F family protein
COORDINATES: protein motif:HMM:NF013827.2
rhomboid family intramembrane serine protease
COORDINATES: protein motif:HMM:NF019575.2
prepilin-type N-terminal cleavage/methylation domain-containing protein
COORDINATES: protein motif:HMM:NF019284.2
toxin-antitoxin system YwqK family antitoxin
COORDINATES: protein motif:HMM:TIGR00095.1
GO:0052913 - 16S rRNA (guanine(966)-N(2))-methyltransferase activity [Evidence IEA]
GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
COORDINATES: protein motif:HMM:NF012321.2
COORDINATES: protein motif:HMM:NF012330.2
GO:0006470 - protein dephosphorylation [Evidence IEA]
protein-tyrosine phosphatase family protein
COORDINATES: protein motif:HMM:NF015048.2
COORDINATES: protein motif:HMM:NF012745.2
COORDINATES: protein motif:HMM:NF024879.2
glycine zipper domain-containing protein
COORDINATES: protein motif:HMM:NF024241.2
COORDINATES: similar to AA sequence:RefSeq:WP_013181231.1
COORDINATES: protein motif:HMM:NF013630.2
LysM peptidoglycan-binding domain-containing protein
COORDINATES: protein motif:HMM:NF012894.2
COORDINATES: similar to AA sequence:RefSeq:WP_011176393.1
COORDINATES: similar to AA sequence:RefSeq:WP_011176392.1
MotA/TolQ/ExbB proton channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011176389.1
COORDINATES: protein motif:HMM:NF013921.2
COORDINATES: similar to AA sequence:RefSeq:WP_013182825.1
COORDINATES: similar to AA sequence:RefSeq:WP_011176387.1
succinate dehydrogenase flavoprotein subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013182823.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
succinate dehydrogenase iron-sulfur subunit
COORDINATES: protein motif:HMM:TIGR03026.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0003979 - UDP-glucose 6-dehydrogenase activity [Evidence IEA]
GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF027681.2
GO:0003824 - catalytic activity [Evidence IEA]
NAD-dependent epimerase/dehydratase family protein
COORDINATES: protein motif:HMM:TIGR01479.1
GO:0004476 - mannose-6-phosphate isomerase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_013943674.1
COORDINATES: protein motif:HMM:TIGR00254.1
COORDINATES: similar to AA sequence:RefSeq:WP_013182817.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]; GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
COORDINATES: protein motif:HMM:NF025700.2
COORDINATES: similar to AA sequence:RefSeq:WP_013942505.1
COORDINATES: similar to AA sequence:RefSeq:WP_011176355.1
GO:0003678 - DNA helicase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF012514.2
COORDINATES: protein motif:HMM:TIGR02290.1
COORDINATES: protein motif:HMM:TIGR00585.2
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO:0006298 - mismatch repair [Evidence IEA]
COORDINATES: protein motif:HMM:NF012766.2
COORDINATES: protein motif:HMM:NF012437.2
GO:0007165 - signal transduction [Evidence IEA]
adenylate/guanylate cyclase domain-containing protein
COORDINATES: protein motif:HMM:TIGR00494.1
GO:1903425 - fluoride transmembrane transporter activity [Evidence IEA]
GO:1903424 - fluoride transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF014677.2
COORDINATES: protein motif:HMM:NF013540.2
COORDINATES: protein motif:HMM:NF014567.2
COORDINATES: similar to AA sequence:RefSeq:WP_013942736.1
COORDINATES: protein motif:HMM:NF024751.2
COORDINATES: protein motif:HMM:TIGR00728.1
GO:0035673 - oligopeptide transmembrane transporter activity [Evidence IEA]
GO:0006857 - oligopeptide transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011174660.1
COORDINATES: protein motif:HMM:NF012695.2
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015114.2
COORDINATES: similar to AA sequence:RefSeq:WP_013181202.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016992 - lipoate synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0009107 - lipoate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013925657.1
GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0051068 - dihydrolipoamide metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016658.2
COORDINATES: protein motif:HMM:NF015316.2
outer membrane protein transport protein
COORDINATES: similar to AA sequence:RefSeq:WP_013181209.1
GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO:0043952 - protein transport by the Sec complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013181211.1
GO:0004609 - phosphatidylserine decarboxylase activity [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024989.2
zinc-binding alcohol dehydrogenase family protein
COORDINATES: protein motif:HMM:NF012417.2
COORDINATES: similar to AA sequence:RefSeq:WP_006339727.1
GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011174572.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
COORDINATES: protein motif:HMM:NF013939.2
COORDINATES: similar to AA sequence:RefSeq:WP_013182828.1
GO:0009379 - Holliday junction helicase complex [Evidence IEA]
GO:0009378 - four-way junction helicase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
Holliday junction branch migration protein RuvA
COORDINATES: similar to AA sequence:RefSeq:WP_013925625.1
GO:0008821 - crossover junction endodeoxyribonuclease activity [Evidence IEA]
crossover junction endodeoxyribonuclease RuvC
COORDINATES: similar to AA sequence:RefSeq:WP_011174567.1
GO:0008920 - lipopolysaccharide heptosyltransferase activity [Evidence IEA]
GO:0009244 - lipopolysaccharide core region biosynthetic process [Evidence IEA]
lipopolysaccharide heptosyltransferase II
COORDINATES: protein motif:HMM:NF013257.2
COORDINATES: protein motif:HMM:NF013836.2
GO:0070569 - uridylyltransferase activity [Evidence IEA]
UTP--glucose-1-phosphate uridylyltransferase
COORDINATES: protein motif:HMM:NF025019.2
COORDINATES: similar to AA sequence:RefSeq:WP_006341208.1
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
COORDINATES: protein motif:HMM:TIGR00196.1
bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase
COORDINATES: protein motif:HMM:NF024964.2
COORDINATES: similar to AA sequence:RefSeq:WP_013182875.1
COORDINATES: protein motif:HMM:NF014606.2
GO:0015159 - polysaccharide transmembrane transporter activity [Evidence IEA]
GO:0015774 - polysaccharide transport [Evidence IEA]
polysaccharide biosynthesis/export family protein
COORDINATES: protein motif:HMM:NF016800.2
COORDINATES: protein motif:HMM:NF015662.2
GO:0008658 - penicillin binding [Evidence IEA]
penicillin-binding transpeptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011174686.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006341967.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02075.1
GO:0033862 - UMP kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011176421.1
GO:0008135 - translation factor activity, RNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014691.2
COORDINATES: protein motif:HMM:NF012521.2
COORDINATES: protein motif:HMM:NF014114.2
COORDINATES: protein motif:HMM:NF001183.0
GO:0050518 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity [Evidence IEA]
GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
COORDINATES: protein motif:HMM:NF012443.2
COORDINATES: protein motif:HMM:NF014232.2
GO:0005515 - protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014566.2
CPBP family intramembrane metalloprotease
heavy-metal-associated domain-containing protein
COORDINATES: protein motif:HMM:NF024946.2
COORDINATES: protein motif:HMM:NF012398.2
NAD-dependent succinate-semialdehyde dehydrogenase
COORDINATES: protein motif:HMM:NF013776.2
COORDINATES: protein motif:HMM:TIGR00726.1
COORDINATES: similar to AA sequence:RefSeq:WP_011174674.1
GO:0008830 - dTDP-4-dehydrorhamnose 3,5-epimerase activity [Evidence IEA]
GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01214.1
GO:0008831 - dTDP-4-dehydrorhamnose reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01181.1
GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF003952.0
GO:0008690 - 3-deoxy-manno-octulosonate cytidylyltransferase activity [Evidence IEA]
3-deoxy-manno-octulosonate cytidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013181188.1
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011174740.1
COORDINATES: protein motif:HMM:TIGR01981.1
GO:0005198 - structural molecule activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013924385.1
COORDINATES: protein motif:HMM:NF013478.2
COORDINATES: similar to AA sequence:RefSeq:WP_006341497.1
GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
type III secretion system export apparatus subunit SctS
COORDINATES: protein motif:HMM:NF009438.0
GO:0030257 - type III protein secretion system complex [Evidence IEA]
type III secretion system export apparatus subunit SctR
COORDINATES: protein motif:HMM:NF004968.0
HrpE/YscL family type III secretion apparatus protein
COORDINATES: protein motif:HMM:NF013664.2
type III secretion periplasmic lipoprotein
COORDINATES: protein motif:HMM:NF025025.2
COORDINATES: protein motif:HMM:NF014587.2
COORDINATES: protein motif:HMM:NF013594.2
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01525.1
COORDINATES: protein motif:HMM:NF012707.2
transporter substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013925455.1
glycogen/starch/alpha-glucan phosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_006341359.1
COORDINATES: protein motif:HMM:TIGR00153.1
COORDINATES: similar to AA sequence:RefSeq:WP_011174710.1
COORDINATES: similar to AA sequence:RefSeq:WP_011174711.1
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
COORDINATES: protein motif:HMM:NF012488.2
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: protein motif:HMM:NF013738.2
GO:0005506 - iron ion binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
winged helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF014669.2
COORDINATES: protein motif:HMM:NF021354.2
COORDINATES: protein motif:HMM:TIGR00121.1
GO:0004077 - biotin-[acetyl-CoA-carboxylase] ligase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011174716.1
GO:0051301 - cell division [Evidence IEA]
FtsW/RodA/SpoVE family cell cycle protein
COORDINATES: protein motif:HMM:NF016258.2
GO:0019867 - outer membrane [Evidence IEA]
outer membrane protein assembly factor BamE
COORDINATES: similar to AA sequence:RefSeq:WP_011174756.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006341349.1
COORDINATES: similar to AA sequence:RefSeq:WP_010720461.1
COORDINATES: similar to AA sequence:RefSeq:WP_020355892.1
COORDINATES: protein motif:HMM:TIGR00225.1
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012298.2
COORDINATES: protein motif:HMM:NF019359.2
COORDINATES: protein motif:HMM:NF013053.2
isochorismatase family cysteine hydrolase
COORDINATES: protein motif:HMM:NF020419.2
nucleotidyl transferase AbiEii/AbiGii toxin family protein
COORDINATES: protein motif:HMM:NF024734.2
type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein
COORDINATES: protein motif:HMM:NF015803.2
ShlB/FhaC/HecB family hemolysin secretion/activation protein
COORDINATES: protein motif:HMM:NF017658.2
filamentous hemagglutinin N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011174769.1
GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013182701.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013942692.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013182814.1
COORDINATES: similar to AA sequence:RefSeq:WP_011176351.1
metal ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF013465.2
GO:0046872 - metal ion binding [Evidence IEA]
zinc ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011176344.1
GO:0140110 - transcription regulator activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006341700.1
TraR/DksA family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011176342.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00200.1
CinA family nicotinamide mononucleotide deamidase-related protein
COORDINATES: similar to AA sequence:RefSeq:WP_011176338.1
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013182788.1
COORDINATES: protein motif:HMM:NF013045.2
COORDINATES: similar to AA sequence:RefSeq:WP_013942712.1
dicarboxylate/amino acid:cation symporter
COORDINATES: protein motif:HMM:NF012305.2
COORDINATES: similar to AA sequence:RefSeq:WP_013182778.1
GO:0097367 - carbohydrate derivative binding [Evidence IEA]
GO:1901135 - carbohydrate derivative metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014645.2
GO:0009029 - tetraacyldisaccharide 4'-kinase activity [Evidence IEA]
GO:0009245 - lipid A biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013942708.1
COORDINATES: protein motif:HMM:NF012424.2
dihydrolipoamide acetyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013924143.1
COORDINATES: similar to AA sequence:RefSeq:WP_006341527.1
GO:0016853 - isomerase activity [Evidence IEA]
KpsF/GutQ family sugar-phosphate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_006340811.1
GO:0015297 - antiporter activity [Evidence IEA]
GO:0006814 - sodium ion transport [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: protein motif:HMM:NF013247.2
COORDINATES: protein motif:HMM:NF019076.2
COORDINATES: protein motif:HMM:TIGR00479.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
COORDINATES: similar to AA sequence:RefSeq:WP_006342566.1
GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]
COORDINATES: protein motif:HMM:NF013117.2
COORDINATES: similar to AA sequence:RefSeq:WP_011176081.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013942528.1
COORDINATES: similar to AA sequence:RefSeq:WP_011175810.1
COORDINATES: similar to AA sequence:RefSeq:WP_006342359.1
GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor [Evidence IEA]
NADH:ubiquinone reductase (Na(+)-transporting) subunit F
COORDINATES: similar to AA sequence:RefSeq:WP_006342358.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003952 - NAD+ synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006785305.1
GO:0016836 - hydro-lyase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF004885.0
GO:0016829 - lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006342099.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011176075.1
COORDINATES: protein motif:HMM:TIGR01721.1
GO:0008714 - AMP nucleosidase activity [Evidence IEA]
GO:0044209 - AMP salvage [Evidence IEA]; GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013182466.1
COORDINATES: similar to AA sequence:RefSeq:WP_013924252.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003690 - double-stranded DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
leucine-rich repeat domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006340514.1
GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011176060.1
GO:0004802 - transketolase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: protein motif:HMM:NF013381.2
GO:0004853 - uroporphyrinogen decarboxylase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011176518.1
GO:0004109 - coproporphyrinogen oxidase activity [Evidence IEA]
oxygen-dependent coproporphyrinogen oxidase
COORDINATES: protein motif:HMM:TIGR00562.1
GO:0004729 - oxygen-dependent protoporphyrinogen oxidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015060.2
COORDINATES: protein motif:HMM:NF012382.2
pyridoxal phosphate-dependent aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006342379.1
GO:0004525 - ribonuclease III activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011174823.1
COORDINATES: protein motif:HMM:TIGR00212.1
GO:0004418 - hydroxymethylbilane synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013181351.1
GO:0009317 - acetyl-CoA carboxylase complex [Evidence IEA]
GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
acetyl-CoA carboxylase, carboxyltransferase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_011174818.1
GO:0004170 - dUTP diphosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
GO:0006226 - dUMP biosynthetic process [Evidence IEA]; GO:0046081 - dUTP catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006342389.1
COORDINATES: protein motif:HMM:NF016817.2
succinylglutamate desuccinylase/aspartoacylase family protein
trypsin-like peptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013935111.1
COORDINATES: protein motif:HMM:NF013069.2
COORDINATES: protein motif:HMM:TIGR01730.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: protein motif:HMM:NF014385.2
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011174816.1
COORDINATES: similar to AA sequence:RefSeq:WP_013944577.1
COORDINATES: similar to AA sequence:RefSeq:WP_013181345.1
ATP-dependent Clp protease ATP-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_006341201.1
COORDINATES: similar to AA sequence:RefSeq:WP_006339752.1
GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF020302.2
COORDINATES: protein motif:HMM:TIGR00879.1
GO:0051119 - sugar transmembrane transporter activity [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013181367.1
GO:0019464 - glycine decarboxylation via glycine cleavage system [Evidence IEA]
flagellar basal body-associated FliL family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011174848.1
NADH:ubiquinone reductase (Na(+)-transporting) subunit E
COORDINATES: similar to AA sequence:RefSeq:WP_013181371.1
NADH:ubiquinone reductase (Na(+)-transporting) subunit D
COORDINATES: protein motif:HMM:TIGR01938.1
NADH:ubiquinone reductase (Na(+)-transporting) subunit C
COORDINATES: similar to AA sequence:RefSeq:WP_013181373.1
NADH:ubiquinone reductase (Na(+)-transporting) subunit B
COORDINATES: similar to AA sequence:RefSeq:WP_013943312.1
COORDINATES: protein motif:HMM:NF039185.1
double zinc ribbon domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_044044722.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
chromosomal replication initiator protein DnaA
COORDINATES: protein motif:HMM:TIGR00710.1
COORDINATES: similar to AA sequence:RefSeq:WP_011175731.1
GO:0004518 - nuclease activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0009650 - UV protection [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013924695.1
COORDINATES: protein motif:HMM:NF012982.2
GO:0016311 - dephosphorylation [Evidence IEA]
dual specificity protein phosphatase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011174859.1
COORDINATES: protein motif:HMM:NF037537.2
COORDINATES: protein motif:HMM:NF014439.2
COORDINATES: protein motif:HMM:NF013919.2
GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
COORDINATES: protein motif:HMM:NF039650.1
FtsL-like putative cell division protein
COORDINATES: similar to AA sequence:RefSeq:WP_013181454.1
COORDINATES: protein motif:HMM:NF001124.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase
COORDINATES: protein motif:HMM:NF013670.2
COORDINATES: similar to AA sequence:RefSeq:WP_013925290.1
GO:0004616 - phosphogluconate dehydrogenase (decarboxylating) activity [Evidence IEA]
decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_013181419.1
COORDINATES: similar to AA sequence:RefSeq:WP_011174800.1
COORDINATES: similar to AA sequence:RefSeq:WP_013182725.1
COORDINATES: similar to AA sequence:RefSeq:WP_013182724.1
COORDINATES: protein motif:HMM:NF017922.2
COORDINATES: similar to AA sequence:RefSeq:WP_013182721.1
COORDINATES: protein motif:HMM:NF013143.2
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
iron chelate uptake ABC transporter family permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_006342327.1
GO:0030604 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0070402 - NADPH binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
1-deoxy-D-xylulose-5-phosphate reductoisomerase
COORDINATES: protein motif:HMM:NF014244.2
COORDINATES: protein motif:HMM:NF015737.2
autotransporter domain-containing protein
COORDINATES: protein motif:HMM:NF027798.2
COORDINATES: similar to AA sequence:RefSeq:WP_016059297.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004797 - thymidine kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024742.2
ankyrin repeat domain-containing protein
COORDINATES: protein motif:HMM:NF024206.2
COORDINATES: protein motif:HMM:NF012242.2
COORDINATES: similar to AA sequence:RefSeq:WP_013944548.1
Glu/Leu/Phe/Val dehydrogenase dimerization domain-containing protein
COORDINATES: protein motif:HMM:NF012657.2
COORDINATES: protein motif:HMM:NF013126.2
glycoside hydrolase family 3 N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011176045.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013212.2
COORDINATES: similar to AA sequence:RefSeq:WP_011176043.1
GO:0009408 - response to heat [Evidence IEA]
heat-inducible transcriptional repressor HrcA
COORDINATES: similar to AA sequence:RefSeq:WP_006341976.1
COORDINATES: similar to AA sequence:RefSeq:WP_013182686.1
GO:0004352 - glutamate dehydrogenase (NAD+) activity [Evidence IEA]
GO:0019551 - glutamate catabolic process to 2-oxoglutarate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013182685.1
COORDINATES: protein motif:HMM:NF014090.2
GO:0005384 - manganese ion transmembrane transporter activity [Evidence IEA]
GO:0030026 - cellular manganese ion homeostasis [Evidence IEA]
COORDINATES: protein motif:HMM:NF002759.0
GO:0004177 - aminopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018050843.1
COORDINATES: similar to AA sequence:RefSeq:WP_011176035.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006341492.1
COORDINATES: protein motif:HMM:NF012880.2
GO:0016624 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013942897.1
COORDINATES: similar to AA sequence:RefSeq:WP_013942896.1
COORDINATES: similar to AA sequence:RefSeq:WP_006341689.1
COORDINATES: protein motif:HMM:NF024118.2
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011175020.1
COORDINATES: protein motif:HMM:NF015714.2
COORDINATES: similar to AA sequence:RefSeq:WP_013181530.1
COORDINATES: protein motif:HMM:NF020904.2
COORDINATES: similar to AA sequence:RefSeq:WP_013182485.1
GO:0016791 - phosphatase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006341451.1
COORDINATES: protein motif:HMM:TIGR01417.1
GO:0008965 - phosphoenolpyruvate-protein phosphotransferase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0006808 - regulation of nitrogen utilization [Evidence IEA]
phosphoenolpyruvate--protein phosphotransferase
COORDINATES: protein motif:HMM:NF012706.2
peptide ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF013703.2
GO:0015297 - antiporter activity [Evidence IEA]; GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011175027.1
GO:0008150 - biological_process [Evidence IEA]
YbaB/EbfC family nucleoid-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_013925558.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011175816.1
COORDINATES: protein motif:HMM:NF013798.2
ubiquitin-like domain-containing protein
COORDINATES: protein motif:HMM:NF012334.2
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_011175812.1
COORDINATES: similar to AA sequence:RefSeq:WP_006341858.1
COORDINATES: protein motif:HMM:NF024258.2
COORDINATES: protein motif:HMM:NF022142.2
COORDINATES: similar to AA sequence:RefSeq:WP_006341846.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR00078.1
GO:0004514 - nicotinate-nucleotide diphosphorylase (carboxylating) activity [Evidence IEA]
GO:0019363 - pyridine nucleotide biosynthetic process [Evidence IEA]
carboxylating nicotinate-nucleotide diphosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_013942399.1
COORDINATES: similar to AA sequence:RefSeq:WP_011175326.1
COORDINATES: protein motif:HMM:TIGR00087.1
GO:0008254 - 3'-nucleotidase activity [Evidence IEA]; GO:0008253 - 5'-nucleotidase activity [Evidence IEA]
GO:0006950 - response to stress [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00813.1
COORDINATES: similar to AA sequence:RefSeq:WP_013181960.1
tRNA 2-thiocytidine biosynthesis TtcA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006340781.1
SEC-C metal-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013181385.1
COORDINATES: protein motif:HMM:NF003763.0
GO:0008792 - arginine decarboxylase activity [Evidence IEA]
GO:0006527 - arginine catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01230.1
GO:0008783 - agmatinase activity [Evidence IEA]
GO:0008295 - spermidine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013924359.1
GO:0008612 - peptidyl-lysine modification to peptidyl-hypusine [Evidence IEA]
COORDINATES: protein motif:HMM:NF012314.2
COORDINATES: protein motif:HMM:NF037785.2
COORDINATES: protein motif:HMM:NF017541.2
COORDINATES: protein motif:HMM:NF013052.2
SET domain-containing protein-lysine N-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013943254.1
COORDINATES: protein motif:HMM:NF015996.2
COORDINATES: protein motif:HMM:NF012360.2
COORDINATES: protein motif:HMM:NF012797.2
COORDINATES: protein motif:HMM:NF013718.2
COORDINATES: protein motif:HMM:NF013918.2
ferric reductase-like transmembrane domain-containing protein
COORDINATES: protein motif:HMM:NF011100.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0019205 - nucleobase-containing compound kinase activity [Evidence IEA]; GO:0016776 - phosphotransferase activity, phosphate group as acceptor [Evidence IEA]
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014686.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024808.2
COORDINATES: protein motif:HMM:NF013412.2
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: protein motif:HMM:NF013866.2
COORDINATES: similar to AA sequence:RefSeq:WP_013181265.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008172 - S-methyltransferase activity [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
GO:0018339 - peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid [Evidence IEA]
30S ribosomal protein S12 methylthiotransferase RimO
COORDINATES: protein motif:HMM:TIGR00815.1
GO:0015116 - sulfate transmembrane transporter activity [Evidence IEA]
GO:0008272 - sulfate transport [Evidence IEA]
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: nucleotide motif:Rfam:14.4:RF00059
TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF012544.2
COORDINATES: protein motif:HMM:TIGR00401.1
GO:0033744 - L-methionine:thioredoxin-disulfide S-oxidoreductase activity [Evidence IEA]; GO:0008113 - peptide-methionine (S)-S-oxide reductase activity [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
peptide-methionine (S)-S-oxide reductase MsrA
COORDINATES: protein motif:HMM:NF019301.2
COORDINATES: protein motif:HMM:NF012318.2
COORDINATES: protein motif:HMM:NF016830.2
COORDINATES: protein motif:HMM:NF013591.2
COORDINATES: protein motif:HMM:NF014396.2
GO:0016158 - 3-phytase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03440.2
GO:0052699 - ergothioneine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011175767.1
COORDINATES: protein motif:HMM:TIGR01845.1
GO:0009279 - cell outer membrane [Evidence IEA]
GO:0015288 - porin activity [Evidence IEA]
efflux transporter outer membrane subunit
COORDINATES: protein motif:HMM:NF027890.2
COORDINATES: protein motif:HMM:NF014869.2
COORDINATES: similar to AA sequence:RefSeq:WP_006340530.1
COORDINATES: protein motif:HMM:NF013103.2
COORDINATES: protein motif:HMM:NF013088.2
COORDINATES: protein motif:HMM:NF013116.2
COORDINATES: protein motif:HMM:NF019604.2
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017007.2
COORDINATES: protein motif:HMM:NF014443.2
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: similar to AA sequence:RefSeq:WP_013943026.1
COORDINATES: similar to AA sequence:RefSeq:WP_013943025.1
COORDINATES: protein motif:HMM:NF012457.2
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04371.1
GO:0008171 - O-methyltransferase activity [Evidence IEA]
GO:0016051 - carbohydrate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013775.2
COORDINATES: similar to AA sequence:RefSeq:WP_011175344.1
GO:0008479 - queuine tRNA-ribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00697.1
GO:1990397 - queuosine salvage [Evidence IEA]
mechanosensitive ion channel family protein
COORDINATES: protein motif:HMM:TIGR00365.1
GO:0009055 - electron transfer activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013851.2
BolA/IbaG family iron-sulfur metabolism protein
COORDINATES: protein motif:HMM:NF024579.2
COORDINATES: protein motif:HMM:NF004684.0
GO:0008864 - formyltetrahydrofolate deformylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017489.2
COORDINATES: similar to AA sequence:RefSeq:WP_011176317.1
GO:0016615 - malate dehydrogenase activity [Evidence IEA]
GO:0006108 - malate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006340267.1
COORDINATES: similar to AA sequence:RefSeq:WP_013943048.1
COORDINATES: similar to AA sequence:RefSeq:WP_013943047.1
COORDINATES: similar to AA sequence:RefSeq:WP_006340268.1
COORDINATES: protein motif:HMM:NF013434.2
COORDINATES: similar to AA sequence:RefSeq:WP_011176311.1
COORDINATES: protein motif:HMM:TIGR00608.1
COORDINATES: protein motif:HMM:NF014025.2
COORDINATES: similar to AA sequence:RefSeq:WP_013182300.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB
COORDINATES: protein motif:HMM:NF020947.2
COORDINATES: protein motif:HMM:NF017273.2
COORDINATES: protein motif:HMM:NF015549.2
COORDINATES: protein motif:HMM:TIGR00147.1
diacylglycerol kinase family lipid kinase
COORDINATES: protein motif:HMM:NF008967.0
GO:0003844 - 1,4-alpha-glucan branching enzyme activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA]; GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013924964.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011176303.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
COORDINATES: similar to AA sequence:RefSeq:WP_006342610.1
COORDINATES: similar to AA sequence:RefSeq:WP_011176301.1
COORDINATES: similar to AA sequence:RefSeq:WP_013943559.1
COORDINATES: protein motif:HMM:NF012455.2
GO:0015267 - channel activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02452.1
COORDINATES: protein motif:HMM:NF014165.2
COORDINATES: protein motif:HMM:NF015684.2
COORDINATES: protein motif:HMM:TIGR02432.1
GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006342484.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013943084.1
COORDINATES: similar to AA sequence:RefSeq:WP_013943083.1
GO:0008745 - N-acetylmuramoyl-L-alanine amidase activity [Evidence IEA]
GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03591.1
GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]
GO:0006402 - mRNA catabolic process [Evidence IEA]
polyribonucleotide nucleotidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011275926.1
COORDINATES: protein motif:HMM:NF008113.2
GO:0008251 - tRNA-specific adenosine deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0002100 - tRNA wobble adenosine to inosine editing [Evidence IEA]
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013181780.1
COORDINATES: protein motif:HMM:TIGR00019.1
GO:0016149 - translation release factor activity, codon specific [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
COORDINATES: protein motif:HMM:NF037644.2
COORDINATES: similar to AA sequence:RefSeq:WP_006340173.1
GO:0048501 - signal recognition particle, plasma membrane targeting [Evidence IEA]
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005048 - signal sequence binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006340174.1
COORDINATES: similar to AA sequence:RefSeq:WP_013181785.1
GO:0009019 - tRNA (guanine-N1-)-methyltransferase activity [Evidence IEA]
tRNA (guanosine(37)-N1)-methyltransferase TrmD
COORDINATES: similar to AA sequence:RefSeq:WP_000181401.1
COORDINATES: similar to AA sequence:RefSeq:WP_011175208.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013943107.1
COORDINATES: similar to AA sequence:RefSeq:WP_013943106.1
COORDINATES: protein motif:HMM:TIGR00255.1
COORDINATES: similar to AA sequence:RefSeq:WP_013925231.1
GO:0004385 - guanylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006340190.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006341248.1
GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012995.2
GO:0016407 - acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013181608.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025587.2
2-oxoglutarate and iron-dependent oxygenase domain-containing protein
COORDINATES: protein motif:HMM:NF012770.2
COORDINATES: protein motif:HMM:NF019846.2
COORDINATES: protein motif:HMM:NF016852.2
COORDINATES: similar to AA sequence:RefSeq:WP_013181542.1
COORDINATES: similar to AA sequence:RefSeq:WP_011175730.1
COORDINATES: similar to AA sequence:RefSeq:WP_013182405.1
COORDINATES: protein motif:HMM:NF024724.2
COORDINATES: similar to AA sequence:RefSeq:WP_011175728.1
COORDINATES: similar to AA sequence:RefSeq:WP_011175727.1
COORDINATES: similar to AA sequence:RefSeq:WP_006340876.1
COORDINATES: protein motif:HMM:NF001924.0
GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006340872.1
GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013182396.1
COORDINATES: protein motif:HMM:NF015679.2
COORDINATES: similar to AA sequence:RefSeq:WP_006340868.1
acetyl-CoA carboxylase carboxyltransferase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_011175713.1
COORDINATES: similar to AA sequence:RefSeq:WP_013943151.1
COORDINATES: similar to AA sequence:RefSeq:WP_013943150.1
COORDINATES: similar to AA sequence:RefSeq:WP_013181708.1
COORDINATES: similar to AA sequence:RefSeq:WP_013925300.1
GO:0045250 - cytosolic pyruvate dehydrogenase complex [Evidence IEA]
GO:0004739 - pyruvate dehydrogenase (acetyl-transferring) activity [Evidence IEA]
GO:0006086 - acetyl-CoA biosynthetic process from pyruvate [Evidence IEA]
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_011176277.1
pyruvate dehydrogenase complex E1 component subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_013182270.1
GO:0045254 - pyruvate dehydrogenase complex [Evidence IEA]
GO:0004742 - dihydrolipoyllysine-residue acetyltransferase activity [Evidence IEA]; GO:0004738 - pyruvate dehydrogenase activity [Evidence IEA]
pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase
COORDINATES: protein motif:HMM:NF013694.2
magnesium transporter CorA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013943159.1
GO:0016410 - N-acyltransferase activity [Evidence IEA]
UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase
COORDINATES: protein motif:HMM:NF015871.2
COORDINATES: protein motif:HMM:TIGR03303.1
outer membrane protein assembly factor BamA
COORDINATES: similar to AA sequence:RefSeq:WP_013924700.1
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011176265.1
COORDINATES: similar to AA sequence:RefSeq:WP_006340390.1
GO:0004314 - [acyl-carrier-protein] S-malonyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006340389.1
GO:0004316 - 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002510960.1
GO:0000036 - acyl carrier activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011175805.1
GO:0006629 - lipid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011176258.1
GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
NAD(P)-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011176256.1
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014047.2
COORDINATES: similar to AA sequence:RefSeq:WP_011176253.1
23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
COORDINATES: protein motif:HMM:TIGR00544.1
GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
GO:0009249 - protein lipoylation [Evidence IEA]
prolipoprotein diacylglyceryl transferase
COORDINATES: protein motif:HMM:NF013401.2
COORDINATES: similar to AA sequence:RefSeq:WP_006339816.1
GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006351 - DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013182046.1
GO:0070006 - metalloaminopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00005.1
COORDINATES: protein motif:HMM:TIGR02193.1
lipopolysaccharide heptosyltransferase I
COORDINATES: similar to AA sequence:RefSeq:WP_013182001.1
COORDINATES: similar to AA sequence:RefSeq:WP_013182002.1
COORDINATES: protein motif:HMM:TIGR00444.1
COORDINATES: protein motif:HMM:NF025879.2
signal recognition particle sRNA small type
COORDINATES: nucleotide motif:Rfam:14.4:RF00169
COORDINATES: similar to AA sequence:RefSeq:WP_011176187.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011176182.1
GO:0004743 - pyruvate kinase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013943216.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008986 - pyruvate, water dikinase activity [Evidence IEA]; GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]; GO:0006090 - pyruvate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00046.1
COORDINATES: protein motif:HMM:NF015251.2
COORDINATES: protein motif:HMM:NF024831.2
COORDINATES: similar to AA sequence:RefSeq:WP_013924719.1
GO:0004016 - adenylate cyclase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013181870.1
COORDINATES: similar to AA sequence:RefSeq:WP_013181871.1
GO:0016682 - oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor [Evidence IEA]
cytochrome d ubiquinol oxidase subunit II
COORDINATES: similar to AA sequence:RefSeq:WP_013943227.1
COORDINATES: similar to AA sequence:RefSeq:WP_013943226.1
COORDINATES: similar to AA sequence:RefSeq:WP_006341656.1
COORDINATES: similar to AA sequence:RefSeq:WP_011175169.1
GO:0008661 - 1-deoxy-D-xylulose-5-phosphate synthase activity [Evidence IEA]
GO:0016114 - terpenoid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006341658.1
GO:0009318 - exodeoxyribonuclease VII complex [Evidence IEA]
GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO:0006308 - DNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013924708.1
COORDINATES: similar to AA sequence:RefSeq:WP_013182225.1
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011175352.1
COORDINATES: protein motif:HMM:NF001159.1
GO:0042586 - peptide deformylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014591.2
COORDINATES: similar to AA sequence:RefSeq:WP_013924723.1
COORDINATES: protein motif:HMM:NF015436.2
COORDINATES: protein motif:HMM:TIGR00043.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006341625.1
COORDINATES: similar to AA sequence:RefSeq:WP_006341624.1
COORDINATES: similar to AA sequence:RefSeq:WP_013942968.1
COORDINATES: protein motif:HMM:NF015406.2
COORDINATES: protein motif:HMM:NF024701.2
TetR-like C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF016267.2
COORDINATES: protein motif:HMM:NF016270.2
COORDINATES: similar to AA sequence:RefSeq:WP_013182117.1
COORDINATES: similar to AA sequence:RefSeq:WP_006339856.1
COORDINATES: protein motif:HMM:TIGR00358.1
GO:0016896 - exoribonuclease activity, producing 5'-phosphomonoesters [Evidence IEA]
GO:0006401 - RNA catabolic process [Evidence IEA]
VacB/RNase II family 3'-5' exoribonuclease
COORDINATES: protein motif:HMM:NF013094.2
COORDINATES: protein motif:HMM:NF014636.2
COORDINATES: similar to AA sequence:RefSeq:WP_013943269.1
Nif11-like leader peptide family natural product precursor
COORDINATES: similar to AA sequence:RefSeq:WP_013943268.1
COORDINATES: protein motif:HMM:TIGR00702.1
COORDINATES: protein motif:HMM:NF019429.2
COORDINATES: protein motif:HMM:NF012869.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]
cysteine peptidase family C39 domain-containing protein
COORDINATES: protein motif:HMM:NF024829.2
HlyD family efflux transporter periplasmic adaptor subunit
COORDINATES: protein motif:HMM:NF024811.2
COORDINATES: protein motif:HMM:NF014477.2
GO:0017013 - protein flavinylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013182243.1
GO:0004488 - methylenetetrahydrofolate dehydrogenase (NADP+) activity [Evidence IEA]
bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD
COORDINATES: protein motif:HMM:NF012673.2
COORDINATES: protein motif:HMM:TIGR01179.1
GO:0003978 - UDP-glucose 4-epimerase activity [Evidence IEA]
GO:0006012 - galactose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011176242.1
COORDINATES: protein motif:HMM:NF040521.1
C45 family autoproteolytic acyltransferase/hydolase
COORDINATES: similar to AA sequence:RefSeq:WP_013943286.1
COORDINATES: similar to AA sequence:RefSeq:WP_013182238.1
UDP-glucose/GDP-mannose dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006341257.1
COORDINATES: protein motif:HMM:NF014717.2
COORDINATES: similar to AA sequence:RefSeq:WP_006341259.1
COORDINATES: protein motif:HMM:TIGR03723.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
COORDINATES: protein motif:HMM:NF013315.2
methyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013925082.1
GO:0017057 - 6-phosphogluconolactonase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021632.2
glucose-6-phosphate dehydrogenase assembly protein OpcA
COORDINATES: similar to AA sequence:RefSeq:WP_006339785.1
GO:0004345 - glucose-6-phosphate dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF006878.0
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0008987 - quinolinate synthetase A activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015607.2
GO:0003674 - molecular_function [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006339768.1
GO:0003883 - CTP synthase activity [Evidence IEA]
GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF023351.2
inverse autotransporter beta-barrel domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011175428.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0003941 - L-serine ammonia-lyase activity [Evidence IEA]
GO:0009063 - amino acid catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013924907.1
GO:0047334 - diphosphate-fructose-6-phosphate 1-phosphotransferase activity [Evidence IEA]
diphosphate--fructose-6-phosphate 1-phosphotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013942821.1
COORDINATES: protein motif:HMM:NF013087.2
COORDINATES: protein motif:HMM:NF013494.2
4a-hydroxytetrahydrobiopterin dehydratase
COORDINATES: similar to AA sequence:RefSeq:WP_013925438.1
GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity [Evidence IEA]
(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
COORDINATES: protein motif:HMM:TIGR01891.1
GO:0004180 - carboxypeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF033684.1
transporter suffix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013924739.1
replication-associated recombination protein A
COORDINATES: similar to AA sequence:RefSeq:WP_013182327.1
COORDINATES: protein motif:HMM:NF024809.2
ABC-F family ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:NF013077.2
COORDINATES: protein motif:HMM:TIGR00112.1
GO:0004735 - pyrroline-5-carboxylate reductase activity [Evidence IEA]
GO:0006561 - proline biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014796.2
COORDINATES: protein motif:HMM:TIGR00149.1
secondary thiamine-phosphate synthase enzyme YjbQ
COORDINATES: protein motif:HMM:NF015603.2
COORDINATES: protein motif:HMM:TIGR00057.1
GO:0061710 - L-threonylcarbamoyladenylate synthase [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013943780.1
COORDINATES: similar to AA sequence:RefSeq:WP_006342307.1
GO:0004849 - uridine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013182334.1
COORDINATES: protein motif:HMM:NF039724.1
COORDINATES: similar to AA sequence:RefSeq:WP_013182819.1
GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO:0009451 - RNA modification [Evidence IEA]
23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
COORDINATES: protein motif:HMM:NF024950.2
COORDINATES: protein motif:HMM:NF021981.2
GO:0009306 - protein secretion [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: protein motif:HMM:NF009773.0
GO:0004555 - alpha,alpha-trehalase activity [Evidence IEA]
GO:0005991 - trehalose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013080.2
GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025113.2
COORDINATES: protein motif:HMM:NF033579.1
COORDINATES: protein motif:HMM:NF014081.2
COORDINATES: protein motif:HMM:TIGR01321.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012640.2
anthranilate synthase component I family protein
COORDINATES: protein motif:HMM:NF012345.2
aminodeoxychorismate/anthranilate synthase component II
COORDINATES: protein motif:HMM:TIGR01245.1
GO:0004048 - anthranilate phosphoribosyltransferase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF001377.0
GO:0004425 - indole-3-glycerol-phosphate synthase activity [Evidence IEA]
GO:0006568 - tryptophan metabolic process [Evidence IEA]
indole-3-glycerol phosphate synthase TrpC
COORDINATES: protein motif:HMM:NF012900.2
COORDINATES: similar to AA sequence:RefSeq:WP_018036536.1
GO:0004834 - tryptophan synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00262.1
COORDINATES: protein motif:HMM:NF006421.0
GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
GO:0009423 - chorismate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013182182.1
GO:0016881 - acid-amino acid ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024628.2
COORDINATES: protein motif:HMM:NF023568.2
COORDINATES: protein motif:HMM:NF012593.2
GO:0015293 - symporter activity [Evidence IEA]
cation:dicarboxylase symporter family transporter
COORDINATES: protein motif:HMM:NF019013.2
GO:0030638 - polyketide metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF033580.1
COORDINATES: similar to AA sequence:RefSeq:WP_011175683.1
GO:0000413 - protein peptidyl-prolyl isomerization [Evidence IEA]
COORDINATES: protein motif:HMM:NF017024.2
dihydrodipicolinate reductase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF012904.2
GO:0008840 - 4-hydroxy-tetrahydrodipicolinate synthase activity [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_006340579.1
GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006340580.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015444.2
COORDINATES: protein motif:HMM:NF017819.2
COORDINATES: similar to AA sequence:RefSeq:WP_013182518.1
peptide chain release factor-like protein
COORDINATES: protein motif:HMM:NF021759.2
COORDINATES: protein motif:HMM:NF002528.0
D-alanine--D-alanine ligase family protein
COORDINATES: protein motif:HMM:TIGR00797.1
COORDINATES: protein motif:HMM:TIGR01434.1
GO:0004357 - glutamate-cysteine ligase activity [Evidence IEA]
GO:0006750 - glutathione biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012739.2
COORDINATES: protein motif:HMM:TIGR00711.1
GO:0009410 - response to xenobiotic stimulus [Evidence IEA]; GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
DHA2 family efflux MFS transporter permease subunit
COORDINATES: protein motif:HMM:NF012546.2
COORDINATES: protein motif:HMM:NF024057.2
COORDINATES: protein motif:HMM:NF015557.2
COORDINATES: protein motif:HMM:NF013245.2
COORDINATES: protein motif:HMM:NF021503.2
DUF2227 family putative metal-binding protein
COORDINATES: protein motif:HMM:NF012383.2
GO:0009116 - nucleoside metabolic process [Evidence IEA]
phosphoribosyltransferase family protein
COORDINATES: protein motif:HMM:NF016777.2
COORDINATES: similar to AA sequence:RefSeq:WP_006341894.1
COORDINATES: protein motif:HMM:NF014523.2
COORDINATES: similar to AA sequence:RefSeq:WP_013182290.1
COORDINATES: similar to AA sequence:RefSeq:WP_006341891.1
COORDINATES: protein motif:HMM:TIGR01313.1
COORDINATES: protein motif:HMM:TIGR02552.1
SycD/LcrH family type III secretion system chaperone
COORDINATES: similar to AA sequence:RefSeq:WP_013182283.1
GO:0042286 - glutamate-1-semialdehyde 2,1-aminomutase activity [Evidence IEA]
glutamate-1-semialdehyde 2,1-aminomutase
COORDINATES: protein motif:HMM:NF014062.2
COORDINATES: similar to AA sequence:RefSeq:WP_013182280.1
flotillin-like protein involved in membrane lipid rafts; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF014901.2
GO:0008234 - cysteine-type peptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016250.2
COORDINATES: protein motif:HMM:NF019887.2
COORDINATES: similar to AA sequence:RefSeq:WP_013925330.1
COORDINATES: protein motif:HMM:NF019342.2
Members of this family of hydrolases with an active site Cys residue belong to MEROPS family C26; Derived by automated computational analysis using gene prediction method: Protein Homology.
gamma-glutamyl-gamma-aminobutyrate hydrolase family protein
COORDINATES: protein motif:HMM:NF012799.2
COORDINATES: protein motif:HMM:TIGR00357.1
GO:0033743 - peptide-methionine (R)-S-oxide reductase activity [Evidence IEA]
peptide-methionine (R)-S-oxide reductase MsrB
COORDINATES: protein motif:HMM:TIGR00539.1
GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011175645.1
COORDINATES: protein motif:HMM:NF006914.0
GO:0004591 - oxoglutarate dehydrogenase (succinyl-transferring) activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
2-oxoglutarate dehydrogenase E1 component
COORDINATES: similar to AA sequence:RefSeq:WP_006340963.1
GO:0045252 - oxoglutarate dehydrogenase complex [Evidence IEA]
GO:0004149 - dihydrolipoyllysine-residue succinyltransferase activity [Evidence IEA]
GO:0006554 - lysine catabolic process [Evidence IEA]; GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
dihydrolipoyllysine-residue succinyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011175638.1
COORDINATES: similar to AA sequence:RefSeq:WP_011175634.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
2Fe-2S iron-sulfur cluster-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_006340950.1
iron-sulfur cluster assembly accessory protein
COORDINATES: protein motif:HMM:NF012624.2
COORDINATES: similar to AA sequence:RefSeq:WP_013924635.1
GO:0009009 - site-specific recombinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011175219.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
COORDINATES: similar to AA sequence:RefSeq:WP_011175220.1
GO:0030956 - glutamyl-tRNA(Gln) amidotransferase complex [Evidence IEA]
GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA
COORDINATES: similar to AA sequence:RefSeq:WP_011175221.1
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC
COORDINATES: similar to AA sequence:RefSeq:WP_013943479.1
COORDINATES: protein motif:HMM:TIGR01777.1
COORDINATES: protein motif:HMM:NF017347.2
GO:0015658 - branched-chain amino acid transmembrane transporter activity [Evidence IEA]
GO:0015803 - branched-chain amino acid transport [Evidence IEA]
branched-chain amino acid transport system II carrier protein
COORDINATES: protein motif:HMM:NF016764.2
COORDINATES: protein motif:HMM:TIGR00004.1
COORDINATES: protein motif:HMM:NF014516.2
COORDINATES: similar to AA sequence:RefSeq:WP_011175229.1
GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006341266.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006340259.1
COORDINATES: similar to AA sequence:RefSeq:WP_011175630.1
bifunctional serine/threonine-protein kinase/formylglycine-generating enzyme family protein
COORDINATES: protein motif:HMM:NF013607.2
low molecular weight protein-tyrosine-phosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_006341886.1
GO:0051745 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity [Evidence IEA]
GO:0009240 - isopentenyl diphosphate biosynthetic process [Evidence IEA]; GO:0046677 - response to antibiotic [Evidence IEA]; GO:0015968 - stringent response [Evidence IEA]
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_016290536.1
COORDINATES: similar to AA sequence:RefSeq:WP_017953349.1
COORDINATES: similar to AA sequence:RefSeq:WP_011176050.1
COORDINATES: similar to AA sequence:RefSeq:WP_011176049.1
COORDINATES: similar to AA sequence:RefSeq:WP_011175483.1
GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF022441.2
COORDINATES: protein motif:HMM:NF015146.2
COORDINATES: protein motif:HMM:NF015957.2
COORDINATES: protein motif:HMM:NF012241.2
COORDINATES: protein motif:HMM:NF014705.2
COORDINATES: protein motif:HMM:TIGR01382.1
type 1 glutamine amidotransferase domain-containing protein
COORDINATES: protein motif:HMM:NF020965.2
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: protein motif:HMM:NF019474.2
COORDINATES: similar to AA sequence:RefSeq:WP_013925356.1
GO:0004107 - chorismate synthase activity [Evidence IEA]
GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013375.2
COORDINATES: similar to AA sequence:RefSeq:WP_013925358.1
GO:0003866 - 3-phosphoshikimate 1-carboxyvinyltransferase activity [Evidence IEA]
3-phosphoshikimate 1-carboxyvinyltransferase
COORDINATES: protein motif:HMM:TIGR01357.1
GO:0003856 - 3-dehydroquinate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012998.2
prephenate dehydratase domain-containing protein
COORDINATES: protein motif:HMM:NF014234.2
GO:0008977 - prephenate dehydrogenase (NAD+) activity [Evidence IEA]; GO:0004665 - prephenate dehydrogenase (NADP+) activity [Evidence IEA]
GO:0006571 - tyrosine biosynthetic process [Evidence IEA]
prephenate dehydrogenase/arogenate dehydrogenase family protein
COORDINATES: protein motif:HMM:TIGR00507.1
GO:0004764 - shikimate 3-dehydrogenase (NADP+) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012515.2
COORDINATES: protein motif:HMM:NF024790.2
COORDINATES: protein motif:HMM:NF013132.2
COORDINATES: similar to AA sequence:RefSeq:WP_020079880.1
COORDINATES: protein motif:HMM:NF005558.0
COORDINATES: protein motif:HMM:NF015953.2
GO:0038023 - signaling receptor activity [Evidence IEA]
opioid growth factor receptor-related protein
COORDINATES: similar to AA sequence:RefSeq:WP_013943072.1
COORDINATES: protein motif:HMM:NF013335.2
COORDINATES: protein motif:HMM:NF014035.2
sulfite exporter TauE/SafE family protein
COORDINATES: protein motif:HMM:NF020123.2
GO:0016684 - oxidoreductase activity, acting on peroxide as acceptor [Evidence IEA]; GO:0008379 - thioredoxin peroxidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF010052.0
COORDINATES: protein motif:HMM:NF015194.2
GO:0005471 - ATP:ADP antiporter activity [Evidence IEA]
GO:0006862 - nucleotide transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF014069.2
COORDINATES: protein motif:HMM:NF024910.2
COORDINATES: similar to AA sequence:RefSeq:WP_013943572.1
COORDINATES: protein motif:HMM:NF012690.2
COORDINATES: similar to AA sequence:RefSeq:WP_013943639.1
COORDINATES: similar to AA sequence:RefSeq:WP_006340457.1
COORDINATES: protein motif:HMM:NF013672.2
polysaccharide deacetylase family protein
COORDINATES: protein motif:HMM:NF024547.2
COORDINATES: protein motif:HMM:NF024554.2
COORDINATES: protein motif:HMM:NF012798.2
COORDINATES: protein motif:HMM:NF016311.2
3-deoxy-D-manno-octulosonic acid transferase
COORDINATES: similar to AA sequence:RefSeq:WP_006341664.1
GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03716.1
COORDINATES: similar to AA sequence:RefSeq:WP_011176252.1
COORDINATES: similar to AA sequence:RefSeq:WP_011176250.1
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00611.1
COORDINATES: protein motif:HMM:NF012668.2
COORDINATES: similar to AA sequence:RefSeq:WP_013943609.1
COORDINATES: similar to AA sequence:RefSeq:WP_013943608.1
COORDINATES: similar to AA sequence:RefSeq:WP_013181812.1
COORDINATES: similar to AA sequence:RefSeq:WP_011175064.1
COORDINATES: similar to AA sequence:RefSeq:WP_013181807.1
tRNA (guanine(46)-N(7))-methyltransferase TrmB
COORDINATES: protein motif:HMM:NF013760.2
COORDINATES: protein motif:HMM:NF014525.2
COORDINATES: protein motif:HMM:NF001097.0
GO:0004845 - uracil phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013646.2
COORDINATES: protein motif:HMM:TIGR03797.1
GO:0015440 - ABC-type peptide transporter activity [Evidence IEA]
GO:0043213 - bacteriocin transport [Evidence IEA]
NHLP bacteriocin export ABC transporter permease/ATPase subunit
COORDINATES: protein motif:HMM:TIGR03796.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]
GO:0006508 - proteolysis [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
NHLP family bacteriocin export ABC transporter peptidase/permease/ATPase subunit
COORDINATES: protein motif:HMM:TIGR03793.1
NHLP leader peptide family RiPP precursor
DNA polymerase LigD, polymerase domain-containing protein
COORDINATES: protein motif:HMM:NF024694.2
DNA polymerase ligase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011174555.1
COORDINATES: protein motif:HMM:TIGR01647.1
plasma-membrane proton-efflux P-type ATPase
COORDINATES: protein motif:HMM:NF025023.2
COORDINATES: similar to AA sequence:RefSeq:WP_013943576.1
COORDINATES: similar to AA sequence:RefSeq:WP_007117248.1
COORDINATES: protein motif:HMM:NF020296.2
COORDINATES: protein motif:HMM:NF012308.2
COORDINATES: protein motif:HMM:NF037979.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013048.2
GO:0008417 - fucosyltransferase activity [Evidence IEA]
GO:0006486 - protein glycosylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF033564.0
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015493080.1
translesion error-prone DNA polymerase V autoproteolytic subunit
COORDINATES: protein motif:HMM:NF013015.2
COORDINATES: protein motif:HMM:NF012607.2
COORDINATES: protein motif:HMM:NF012371.2
serine hydrolase domain-containing protein
COORDINATES: protein motif:HMM:NF024975.2
COORDINATES: protein motif:HMM:NF025184.2
COORDINATES: protein motif:HMM:NF013895.2
COORDINATES: similar to AA sequence:RefSeq:WP_011175596.1
COORDINATES: similar to AA sequence:RefSeq:WP_006342434.1
GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
glutamine--fructose-6-phosphate transaminase (isomerizing)
COORDINATES: protein motif:HMM:NF012686.2
COORDINATES: similar to AA sequence:RefSeq:WP_013942493.1
COORDINATES: similar to AA sequence:RefSeq:WP_013944130.1
COORDINATES: protein motif:HMM:NF015377.2
COORDINATES: similar to AA sequence:RefSeq:WP_006340461.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
COORDINATES: protein motif:HMM:NF019843.2
COORDINATES: protein motif:HMM:TIGR01695.1
GO:0034204 - lipid translocation [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
murein biosynthesis integral membrane protein MurJ
COORDINATES: protein motif:HMM:NF013188.2
GO:0015299 - solute:proton antiporter activity [Evidence IEA]
GO:0006812 - cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002381763.1
COORDINATES: protein motif:HMM:NF000756.0
GO:0004370 - glycerol kinase activity [Evidence IEA]
GO:0006071 - glycerol metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01252.1
GO:0047605 - acetolactate decarboxylase activity [Evidence IEA]
GO:0045151 - acetoin biosynthetic process [Evidence IEA]; GO:0006113 - fermentation [Evidence IEA]
glycerol-3-phosphate dehydrogenase/oxidase
COORDINATES: similar to AA sequence:RefSeq:WP_013942400.1
COORDINATES: similar to AA sequence:RefSeq:WP_076612116.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_076612046.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011176103.1
GO:0004325 - ferrochelatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012780.2
COORDINATES: protein motif:HMM:NF019500.2
COORDINATES: protein motif:HMM:NF013936.2
COORDINATES: protein motif:HMM:NF012655.2
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_013181992.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
phenylalanine--tRNA ligase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_011175254.1
COORDINATES: similar to AA sequence:RefSeq:WP_013181990.1
COORDINATES: similar to AA sequence:RefSeq:WP_013181989.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00551.1
GO:0008734 - L-aspartate oxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006340136.1
COORDINATES: protein motif:HMM:TIGR01499.1
COORDINATES: similar to AA sequence:RefSeq:WP_011176171.1
COORDINATES: similar to AA sequence:RefSeq:WP_013181878.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01951.1
transcription antitermination factor NusB
COORDINATES: protein motif:HMM:NF014373.2
COORDINATES: protein motif:HMM:NF012436.2
DNA starvation/stationary phase protection protein
COORDINATES: similar to AA sequence:RefSeq:WP_013925261.1
COORDINATES: protein motif:HMM:NF024575.2
COORDINATES: similar to AA sequence:RefSeq:WP_011175623.1
GO:0004798 - thymidylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006340296.1
GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
DNA topoisomerase (ATP-hydrolyzing) subunit A
COORDINATES: similar to AA sequence:RefSeq:WP_006340295.1
GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
DNA topoisomerase (ATP-hydrolyzing) subunit B
COORDINATES: protein motif:HMM:NF017103.2
COORDINATES: similar to AA sequence:RefSeq:WP_013181273.1
GO:0006950 - response to stress [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
COORDINATES: protein motif:HMM:NF015898.2
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]
BlaI/MecI/CopY family transcriptional regulator
COORDINATES: protein motif:HMM:NF017390.2
COORDINATES: protein motif:HMM:NF001244.0
GO:0052624 - 2-phytyl-1,4-naphthoquinone methyltransferase activity [Evidence IEA]
GO:0042372 - phylloquinone biosynthetic process [Evidence IEA]
bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE
COORDINATES: protein motif:HMM:TIGR00543.1
GO:0008909 - isochorismate synthase activity [Evidence IEA]
GO:0009234 - menaquinone biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00173.1
GO:0070204 - 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylic-acid synthase activity [Evidence IEA]
2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase
COORDINATES: similar to AA sequence:RefSeq:WP_013182100.1
GO:0008935 - 1,4-dihydroxy-2-naphthoyl-CoA synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00751.1
GO:0046428 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity [Evidence IEA]
1,4-dihydroxy-2-naphthoate polyprenyltransferase
COORDINATES: protein motif:HMM:TIGR01927.1
COORDINATES: protein motif:HMM:TIGR01923.1
GO:0008756 - o-succinylbenzoate-CoA ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024675.2
COORDINATES: protein motif:HMM:NF002168.0
COORDINATES: protein motif:HMM:NF012529.2
COORDINATES: similar to AA sequence:RefSeq:WP_013943344.1
COORDINATES: similar to AA sequence:RefSeq:WP_013182043.1
CesT family type III secretion system chaperone
COORDINATES: protein motif:HMM:NF012356.2
COORDINATES: protein motif:HMM:NF033484.1
GO:0004722 - protein serine/threonine phosphatase activity [Evidence IEA]
Stp1/IreP family PP2C-type Ser/Thr phosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_011175271.1
COORDINATES: similar to AA sequence:RefSeq:WP_006342661.1
alpha/beta hydrolase fold domain-containing protein
COORDINATES: protein motif:HMM:NF013741.2
COORDINATES: similar to AA sequence:RefSeq:WP_013182025.1
COORDINATES: similar to AA sequence:RefSeq:WP_006341880.1
GO:0008829 - dCTP deaminase activity [Evidence IEA]
GO:0009394 - 2'-deoxyribonucleotide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006339825.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0009378 - four-way junction helicase activity [Evidence IEA]
Holliday junction branch migration DNA helicase RuvB
COORDINATES: protein motif:HMM:TIGR02669.1
GO:0005575 - cellular_component [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013944379.1
COORDINATES: similar to AA sequence:RefSeq:WP_013944378.1
COORDINATES: similar to AA sequence:RefSeq:WP_013944377.1
COORDINATES: similar to AA sequence:RefSeq:WP_013944376.1
COORDINATES: similar to AA sequence:RefSeq:WP_013944372.1
COORDINATES: similar to AA sequence:RefSeq:WP_002498921.1
GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF009651.0
COORDINATES: similar to AA sequence:RefSeq:WP_013182377.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF024812.2
COORDINATES: similar to AA sequence:RefSeq:WP_011176202.1
COORDINATES: similar to AA sequence:RefSeq:WP_013925487.1
COORDINATES: protein motif:HMM:NF015995.2
glycine betaine ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF009395.0
COORDINATES: similar to AA sequence:RefSeq:WP_006341878.1
COORDINATES: similar to AA sequence:RefSeq:WP_011176206.1
GO:0004333 - fumarate hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013943829.1
COORDINATES: similar to AA sequence:RefSeq:WP_013943828.1
COORDINATES: similar to AA sequence:RefSeq:WP_013181702.1
COORDINATES: protein motif:HMM:NF013647.2
V-type ATPase 116kDa subunit family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006342249.1
COORDINATES: similar to AA sequence:RefSeq:WP_013181699.1
COORDINATES: similar to AA sequence:RefSeq:WP_013925493.1
COORDINATES: protein motif:HMM:NF022415.2
COORDINATES: similar to AA sequence:RefSeq:WP_013181689.1
GO:0004801 - transaldolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012752.2
COORDINATES: protein motif:HMM:NF012239.2
COORDINATES: protein motif:HMM:NF013328.2
DNA-formamidopyrimidine glycosylase family protein
COORDINATES: protein motif:HMM:NF019819.2
COORDINATES: protein motif:HMM:NF012792.2
COORDINATES: similar to AA sequence:RefSeq:WP_011175155.1
GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
DNA-directed RNA polymerase subunit beta'
COORDINATES: similar to AA sequence:RefSeq:WP_006340075.1
DNA-directed RNA polymerase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_001273587.1
COORDINATES: protein motif:HMM:NF000955.1
GO:0015934 - large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003225765.1
COORDINATES: similar to AA sequence:RefSeq:WP_016293571.1
COORDINATES: similar to AA sequence:RefSeq:WP_013181680.1
GO:0006353 - DNA-templated transcription termination [Evidence IEA]
transcription termination/antitermination protein NusG
COORDINATES: protein motif:HMM:TIGR00964.1
COORDINATES: similar to AA sequence:RefSeq:WP_011175145.1
COORDINATES: similar to AA sequence:RefSeq:WP_017185218.1
COORDINATES: similar to AA sequence:RefSeq:WP_006341810.1
COORDINATES: similar to AA sequence:RefSeq:WP_011175137.1
COORDINATES: protein motif:HMM:NF025030.2
COORDINATES: similar to AA sequence:RefSeq:WP_013181668.1
histidine triad nucleotide-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011175132.1
COORDINATES: similar to AA sequence:RefSeq:WP_006341993.1
COORDINATES: protein motif:HMM:NF015197.2
aromatic amino acid transport family protein
COORDINATES: protein motif:HMM:NF018439.2
COORDINATES: protein motif:HMM:NF014414.2
COORDINATES: protein motif:HMM:NF003950.0
dihydrodipicolinate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011175545.1
putative addiction module antidote protein
COORDINATES: protein motif:HMM:NF024913.2
COORDINATES: protein motif:HMM:NF016144.2
COORDINATES: protein motif:HMM:NF013714.2
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012888.2
GO:0008146 - sulfotransferase activity [Evidence IEA]
sulfotransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013925004.1
COORDINATES: protein motif:HMM:NF014021.2
nucleotidyltransferase domain-containing protein
COORDINATES: protein motif:HMM:NF019632.2
ClbS/DfsB family four-helix bundle protein
COORDINATES: similar to AA sequence:RefSeq:WP_006341813.1
COORDINATES: similar to AA sequence:RefSeq:WP_013181635.1
bifunctional nicotinamidase/pyrazinamidase
COORDINATES: similar to AA sequence:RefSeq:WP_013181633.1
GO:0004516 - nicotinate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014664.2
carboxymuconolactone decarboxylase family protein
COORDINATES: protein motif:HMM:TIGR02227.1
COORDINATES: similar to AA sequence:RefSeq:WP_013181627.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00023
COORDINATES: protein motif:HMM:NF039499.1
COORDINATES: protein motif:HMM:NF012618.2
COORDINATES: protein motif:HMM:NF025054.2
COORDINATES: similar to AA sequence:RefSeq:WP_013924990.1
aminoglycoside phosphotransferase family protein
COORDINATES: protein motif:HMM:NF013766.2
peptide-methionine (S)-S-oxide reductase
COORDINATES: similar to AA sequence:RefSeq:WP_013943448.1
COORDINATES: similar to AA sequence:RefSeq:WP_013181340.1
zinc ribbon domain-containing protein YjdM
COORDINATES: protein motif:HMM:TIGR00630.1
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0009381 - excinuclease ABC activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021886.2
COORDINATES: similar to AA sequence:RefSeq:WP_013182205.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
GO:0001522 - pseudouridine synthesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013181604.1
COORDINATES: protein motif:HMM:NF024093.2
COORDINATES: similar to AA sequence:RefSeq:WP_013181742.1
COORDINATES: protein motif:HMM:NF024242.2
trifunctional transcriptional activator/DNA repair protein Ada/methylated-DNA--[protein]-cysteine S-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013181601.1
COORDINATES: protein motif:HMM:NF007756.0
GO:0004089 - carbonate dehydratase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0015976 - carbon utilization [Evidence IEA]
COORDINATES: protein motif:HMM:NF021578.2
COORDINATES: protein motif:HMM:NF012581.2
proton-conducting transporter membrane subunit
COORDINATES: protein motif:HMM:NF015431.2
LysR substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013924922.1
helix-hairpin-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013924098.1
GO:0008495 - protoheme IX farnesyltransferase activity [Evidence IEA]
GO:0048034 - heme O biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015582.2
cytochrome C oxidase subunit IV family protein
COORDINATES: protein motif:HMM:NF012720.2
COORDINATES: similar to AA sequence:RefSeq:WP_011175740.1
GO:0009486 - cytochrome bo3 ubiquinol oxidase activity [Evidence IEA]
GO:0015990 - electron transport coupled proton transport [Evidence IEA]
cytochrome o ubiquinol oxidase subunit I
COORDINATES: similar to AA sequence:RefSeq:WP_013924102.1
COORDINATES: protein motif:HMM:NF022654.2
COORDINATES: protein motif:HMM:NF017532.2
phytanoyl-CoA dioxygenase family protein
COORDINATES: protein motif:HMM:NF013890.2
COORDINATES: similar to AA sequence:RefSeq:WP_013181600.1
COORDINATES: similar to AA sequence:RefSeq:WP_011175031.1
COORDINATES: protein motif:HMM:NF014680.2
COORDINATES: similar to AA sequence:RefSeq:WP_013925137.1
GO:0016780 - phosphotransferase activity, for other substituted phosphate groups [Evidence IEA]
CDP-alcohol phosphatidyltransferase family protein
COORDINATES: protein motif:HMM:NF009029.0
ribonucleoside-diphosphate reductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_013924060.1
GO:0009263 - deoxyribonucleotide biosynthetic process [Evidence IEA]
ribonucleotide-diphosphate reductase subunit beta
COORDINATES: protein motif:HMM:NF028114.2
COORDINATES: protein motif:HMM:NF019966.2
COORDINATES: protein motif:HMM:NF024758.2
COORDINATES: protein motif:HMM:TIGR02037.1
GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0005515 - protein binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0006508 - proteolysis [Evidence IEA]; GO:0006950 - response to stress [Evidence IEA]
COORDINATES: protein motif:HMM:NF015983.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF020133.2
thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha
COORDINATES: protein motif:HMM:NF014798.2
transketolase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF013227.2
DegT/DnrJ/EryC1/StrS family aminotransferase
COORDINATES: protein motif:HMM:NF015241.2
COORDINATES: similar to AA sequence:RefSeq:WP_013925587.1
COORDINATES: similar to AA sequence:RefSeq:WP_011175847.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
ADP-forming succinate--CoA ligase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_011175848.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
signal recognition particle-docking protein FtsY
COORDINATES: similar to AA sequence:RefSeq:WP_013944027.1
COORDINATES: similar to AA sequence:RefSeq:WP_013182420.1
GO:0032508 - DNA duplex unwinding [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00499.1
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF004167.0
COORDINATES: protein motif:HMM:TIGR00016.1
COORDINATES: similar to AA sequence:RefSeq:WP_013182431.1
GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012711.2
COORDINATES: similar to AA sequence:RefSeq:WP_013182436.1
GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00090.1
GO:0043022 - ribosome binding [Evidence IEA]
GO:0017148 - negative regulation of translation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00482.1
GO:0000309 - nicotinamide-nucleotide adenylyltransferase activity [Evidence IEA]; GO:0004515 - nicotinate-nucleotide adenylyltransferase activity [Evidence IEA]
nicotinate (nicotinamide) nucleotide adenylyltransferase
COORDINATES: protein motif:HMM:TIGR01490.1
COORDINATES: protein motif:HMM:TIGR00174.1
GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
COORDINATES: similar to AA sequence:RefSeq:WP_011175794.1
COORDINATES: similar to AA sequence:RefSeq:WP_006340850.1
COORDINATES: similar to AA sequence:RefSeq:WP_006340851.1
COORDINATES: protein motif:HMM:TIGR01082.1
GO:0008763 - UDP-N-acetylmuramate-L-alanine ligase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014345.2
COORDINATES: protein motif:HMM:TIGR01133.1
GO:0050511 - undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity [Evidence IEA]
undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011175799.1
putative peptidoglycan glycosyltransferase FtsW
COORDINATES: protein motif:HMM:TIGR01087.1
GO:0008764 - UDP-N-acetylmuramoylalanine-D-glutamate ligase activity [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
COORDINATES: similar to AA sequence:RefSeq:WP_011175802.1
GO:0008963 - phospho-N-acetylmuramoyl-pentapeptide-transferase activity [Evidence IEA]
phospho-N-acetylmuramoyl-pentapeptide- transferase
COORDINATES: protein motif:HMM:TIGR01143.1
GO:0047480 - UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity [Evidence IEA]
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase
COORDINATES: similar to AA sequence:RefSeq:WP_013181250.1
COORDINATES: protein motif:HMM:NF012301.2
COORDINATES: similar to AA sequence:RefSeq:WP_002221803.1
GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
glucose-1-phosphate thymidylyltransferase RfbA
COORDINATES: similar to AA sequence:RefSeq:WP_006340112.1
GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]; GO:0004075 - biotin carboxylase activity [Evidence IEA]
acetyl-CoA carboxylase biotin carboxylase subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013181948.1
acetyl-CoA carboxylase biotin carboxyl carrier protein
COORDINATES: similar to AA sequence:RefSeq:WP_006340110.1
COORDINATES: protein motif:HMM:TIGR01826.1
COORDINATES: similar to AA sequence:RefSeq:WP_006340109.1
GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013181941.1
COORDINATES: protein motif:HMM:NF004953.0
GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011175312.1
COORDINATES: similar to AA sequence:RefSeq:WP_006340101.1
COORDINATES: similar to AA sequence:RefSeq:WP_013181937.1
GO:0019843 - rRNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00431.1
GO:0004730 - pseudouridylate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018299.2
COORDINATES: similar to AA sequence:RefSeq:WP_006342269.1
COORDINATES: similar to AA sequence:RefSeq:WP_011175300.1
type III secretion system export apparatus subunit SctU
COORDINATES: similar to AA sequence:RefSeq:WP_013181929.1
type III secretion system export apparatus subunit SctV
COORDINATES: protein motif:HMM:TIGR02568.1
GO:0009986 - cell surface [Evidence IEA]
GO:0050709 - negative regulation of protein secretion [Evidence IEA]; GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
type III secretion system gatekeeper subunit SctW
COORDINATES: protein motif:HMM:NF017719.2
COORDINATES: protein motif:HMM:NF011081.0
COORDINATES: protein motif:HMM:NF037477.2
contact-dependent growth inhibition system immunity protein
COORDINATES: protein motif:HMM:NF024762.2
COORDINATES: similar to AA sequence:RefSeq:WP_006342070.1
COORDINATES: protein motif:HMM:NF013832.2
COORDINATES: similar to AA sequence:RefSeq:WP_013181920.1
COORDINATES: protein motif:HMM:NF019344.2
COORDINATES: similar to AA sequence:RefSeq:WP_006340194.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0003957 - NAD(P)+ transhydrogenase (B-specific) activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018677334.1
COORDINATES: protein motif:HMM:NF024491.2
phospholipase D-like domain-containing protein
COORDINATES: protein motif:HMM:NF012935.2
COORDINATES: similar to AA sequence:RefSeq:WP_013944128.1
COORDINATES: similar to AA sequence:RefSeq:WP_013943675.1
COORDINATES: protein motif:HMM:TIGR00217.1
COORDINATES: similar to AA sequence:RefSeq:WP_006341263.1
COORDINATES: similar to AA sequence:RefSeq:WP_006341264.1
COORDINATES: similar to AA sequence:RefSeq:WP_013925224.1
COORDINATES: protein motif:HMM:NF006053.0
COORDINATES: protein motif:HMM:NF003965.0
COORDINATES: protein motif:HMM:TIGR02198.1
GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]
D-glycero-beta-D-manno-heptose-7-phosphate kinase
COORDINATES: similar to AA sequence:RefSeq:WP_006340827.1
GO:0008712 - ADP-glyceromanno-heptose 6-epimerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00154.1
GO:0050515 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity [Evidence IEA]
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase
COORDINATES: protein motif:HMM:TIGR00158.1
COORDINATES: similar to AA sequence:RefSeq:WP_002983142.1
COORDINATES: similar to AA sequence:RefSeq:WP_006341951.1
COORDINATES: protein motif:HMM:TIGR00447.2
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013181899.1
50S ribosomal protein L25/general stress protein Ctc
COORDINATES: similar to AA sequence:RefSeq:WP_011176141.1
COORDINATES: protein motif:HMM:NF001905.0
COORDINATES: similar to AA sequence:RefSeq:WP_011176143.1
GO:0008444 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity [Evidence IEA]
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_044044863.1
GO:0016433 - rRNA (adenine) methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN
COORDINATES: similar to AA sequence:RefSeq:WP_013182345.1
COORDINATES: similar to AA sequence:RefSeq:WP_013182798.1
COORDINATES: similar to AA sequence:RefSeq:WP_011175240.1
GO:0003896 - DNA primase activity [Evidence IEA]
GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01070.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0030983 - mismatched DNA binding [Evidence IEA]
PABP-interacting PAM2 motif-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011175247.1
COORDINATES: protein motif:HMM:NF015721.2
Asp23/Gls24 family envelope stress response protein
COORDINATES: protein motif:HMM:NF025597.2
COORDINATES: similar to AA sequence:RefSeq:WP_004924130.1
COORDINATES: similar to AA sequence:RefSeq:WP_011176151.1
COORDINATES: similar to AA sequence:RefSeq:WP_008650850.1
COORDINATES: protein motif:HMM:NF013022.2
GO:0004526 - ribonuclease P activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006340148.1
COORDINATES: protein motif:HMM:NF025268.2
COORDINATES: similar to AA sequence:RefSeq:WP_013181893.1
COORDINATES: protein motif:HMM:NF036804.2
COORDINATES: similar to AA sequence:RefSeq:WP_011175854.1
COORDINATES: protein motif:HMM:TIGR01942.1
GO:0004652 - polynucleotide adenylyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006378 - mRNA polyadenylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00215.1
GO:0008915 - lipid-A-disaccharide synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013908.2
COORDINATES: protein motif:HMM:TIGR00182.1
GO:0043811 - phosphate:acyl-[acyl carrier protein] acyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013181501.1
COORDINATES: similar to AA sequence:RefSeq:WP_013924318.1
GO:0016746 - acyltransferase activity [Evidence IEA]
1-acyl-sn-glycerol-3-phosphate acyltransferase
COORDINATES: protein motif:HMM:NF027513.2
COORDINATES: protein motif:HMM:NF016854.2
COORDINATES: protein motif:HMM:TIGR03696.1
COORDINATES: similar to AA sequence:RefSeq:WP_013182629.1
COORDINATES: similar to AA sequence:RefSeq:WP_011174671.1
COORDINATES: protein motif:HMM:NF020893.2
COORDINATES: protein motif:HMM:NF013250.2
COORDINATES: similar to AA sequence:RefSeq:WP_006341509.1
YebC/PmpR family DNA-binding transcriptional regulator
COORDINATES: protein motif:HMM:NF024698.2
COORDINATES: similar to AA sequence:RefSeq:WP_148259006.1
GO:0003747 - translation release factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013935023.1
COORDINATES: protein motif:HMM:NF013308.2
COORDINATES: protein motif:HMM:TIGR00071.1
COORDINATES: similar to AA sequence:RefSeq:WP_006340408.1
sigma-54 dependent transcriptional regulator
COORDINATES: protein motif:HMM:NF019896.2
D-Ala-D-Ala carboxypeptidase family metallohydrolase
COORDINATES: protein motif:HMM:NF039793.1
COORDINATES: protein motif:HMM:TIGR03413.1
GO:0004416 - hydroxyacylglutathione hydrolase activity [Evidence IEA]
GO:0019243 - methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione [Evidence IEA]
COORDINATES: protein motif:HMM:NF018028.2
COORDINATES: protein motif:HMM:NF014075.2
COORDINATES: protein motif:HMM:NF014543.2
COORDINATES: protein motif:HMM:NF024976.2
type I restriction enzyme HsdR N-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR00741.1
GO:0022626 - cytosolic ribosome [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA]
GO:0045182 - translation regulator activity [Evidence IEA]
GO:0009386 - translational attenuation [Evidence IEA]
ribosome-associated translation inhibitor RaiA
COORDINATES: similar to AA sequence:RefSeq:WP_013944249.1
COORDINATES: similar to AA sequence:RefSeq:WP_013944250.1
COORDINATES: similar to AA sequence:RefSeq:WP_013944248.1
COORDINATES: protein motif:HMM:TIGR00613.1
COORDINATES: similar to AA sequence:RefSeq:WP_002452125.1
membrane protein insertion efficiency factor YidD
COORDINATES: protein motif:HMM:TIGR00472.1
COORDINATES: protein motif:HMM:TIGR00589.1
methylated-DNA--[protein]-cysteine S-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013944262.1
COORDINATES: similar to AA sequence:RefSeq:WP_006342548.1
COORDINATES: similar to AA sequence:RefSeq:WP_013182625.1
COORDINATES: similar to AA sequence:RefSeq:WP_013924785.1
COORDINATES: similar to AA sequence:RefSeq:WP_011174896.1
GO:0004816 - asparagine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF007495.0
GO:0000049 - tRNA binding [Evidence IEA]
autotransporter outer membrane beta-barrel domain-containing protein
COORDINATES: protein motif:HMM:NF017051.2
COORDINATES: protein motif:HMM:NF015000.2
COORDINATES: protein motif:HMM:NF014668.2
COORDINATES: similar to AA sequence:RefSeq:WP_013182612.1
COORDINATES: similar to AA sequence:RefSeq:WP_006342334.1
COORDINATES: protein motif:HMM:NF003543.0
GO:0008676 - 3-deoxy-8-phosphooctulonate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006341590.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]; GO:0015221 - lipopolysaccharide transmembrane transporter activity [Evidence IEA]
GO:0015920 - lipopolysaccharide transport [Evidence IEA]
LPS export ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:TIGR02201.1
GO:0016757 - glycosyltransferase activity [Evidence IEA]
putative lipopolysaccharide heptosyltransferase III
COORDINATES: similar to AA sequence:RefSeq:WP_013182600.1
GO:0004550 - nucleoside diphosphate kinase activity [Evidence IEA]
GO:0006165 - nucleoside diphosphate phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011174906.1
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006341607.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0004611 - phosphoenolpyruvate carboxykinase activity [Evidence IEA]; GO:0017076 - purine nucleotide binding [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013182646.1
COORDINATES: similar to AA sequence:RefSeq:WP_011175923.1
COORDINATES: protein motif:HMM:TIGR00115.1
GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002466718.1
ATP-dependent Clp protease proteolytic subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011175926.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
ATP-dependent Clp protease ATP-binding subunit ClpX
type III secretion system translocon subunit SctE
COORDINATES: protein motif:HMM:TIGR02500.1
type III secretion system inner membrane ring subunit SctD
COORDINATES: protein motif:HMM:NF037536.2
COORDINATES: similar to AA sequence:RefSeq:WP_006341192.1
GO:0046961 - proton-transporting ATPase activity, rotational mechanism [Evidence IEA]
COORDINATES: protein motif:HMM:NF028099.2
COORDINATES: protein motif:HMM:TIGR02551.1
type III secretion system cytoplasmic ring protein SctQ
COORDINATES: similar to AA sequence:RefSeq:WP_006341200.1
COORDINATES: protein motif:HMM:NF023758.2
COORDINATES: similar to AA sequence:RefSeq:WP_013924338.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012790.2
rhodanese-like domain-containing protein
COORDINATES: protein motif:HMM:NF012403.2
COORDINATES: similar to AA sequence:RefSeq:WP_011176033.1
GO:0000286 - alanine dehydrogenase activity [Evidence IEA]
GO:0006522 - alanine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00652.1
GO:0008837 - diaminopimelate epimerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013924161.1
COORDINATES: similar to AA sequence:RefSeq:WP_006341209.1
GO:0004372 - glycine hydroxymethyltransferase activity [Evidence IEA]
GO:0019264 - glycine biosynthetic process from serine [Evidence IEA]; GO:0035999 - tetrahydrofolate interconversion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013943805.1
COORDINATES: similar to AA sequence:RefSeq:WP_013943804.1
COORDINATES: similar to AA sequence:RefSeq:WP_013943803.1
COORDINATES: similar to AA sequence:RefSeq:WP_013943802.1
COORDINATES: similar to AA sequence:RefSeq:WP_013943801.1
COORDINATES: similar to AA sequence:RefSeq:WP_006341914.1
C4-type zinc ribbon domain-containing protein
COORDINATES: nucleotide motif:Rfam:14.4:RF00010
COORDINATES: protein motif:HMM:NF001399.0
COORDINATES: similar to AA sequence:RefSeq:WP_013182506.1
COORDINATES: similar to AA sequence:RefSeq:WP_006340488.1
zinc finger Ran-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013182502.1
COORDINATES: similar to AA sequence:RefSeq:WP_011175011.1
adenylyltransferase/cytidyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006340503.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03725.1
GO:0003725 - double-stranded RNA binding [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
COORDINATES: similar to AA sequence:RefSeq:WP_006341691.1
COORDINATES: similar to AA sequence:RefSeq:WP_011175018.1
GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
COORDINATES: protein motif:HMM:NF012907.2
COORDINATES: protein motif:HMM:NF024874.2
COORDINATES: protein motif:HMM:NF013413.2
GO:0070573 - metallodipeptidase activity [Evidence IEA]
bifunctional GrpB family protein/GNAT family N-acetyltransferase
COORDINATES: protein motif:HMM:NF013621.2
COORDINATES: protein motif:HMM:NF015043.2
COORDINATES: protein motif:HMM:NF024986.2
glyoxalase/bleomycin resistance/dioxygenase family protein
COORDINATES: protein motif:HMM:NF017970.2
COORDINATES: protein motif:HMM:NF013395.2
COORDINATES: protein motif:HMM:NF022472.2
COORDINATES: protein motif:HMM:TIGR01901.1
COORDINATES: protein motif:HMM:NF024911.2
COORDINATES: similar to AA sequence:RefSeq:WP_013925353.1
COORDINATES: protein motif:HMM:NF015999.2
COORDINATES: protein motif:HMM:NF019351.2
COORDINATES: protein motif:HMM:NF013460.2
cytochrome b/b6 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006341393.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_017042856.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011174983.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
DNA-directed RNA polymerase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_004641037.1
COORDINATES: similar to AA sequence:RefSeq:WP_010262446.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013944453.1
COORDINATES: similar to AA sequence:RefSeq:WP_011174979.1
COORDINATES: similar to AA sequence:RefSeq:WP_003133760.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011174977.1
COORDINATES: similar to AA sequence:RefSeq:WP_006342209.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006342210.1
COORDINATES: similar to AA sequence:RefSeq:WP_016281718.1
COORDINATES: similar to AA sequence:RefSeq:WP_013182548.1
COORDINATES: similar to AA sequence:RefSeq:WP_007394238.1
COORDINATES: similar to AA sequence:RefSeq:WP_002514860.1
COORDINATES: similar to AA sequence:RefSeq:WP_013182551.1
COORDINATES: similar to AA sequence:RefSeq:WP_011174969.1
COORDINATES: similar to AA sequence:RefSeq:WP_000529946.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011174967.1
COORDINATES: similar to AA sequence:RefSeq:WP_006342218.1
COORDINATES: similar to AA sequence:RefSeq:WP_006342219.1
COORDINATES: similar to AA sequence:RefSeq:WP_006342220.1
COORDINATES: similar to AA sequence:RefSeq:WP_006342221.1
COORDINATES: similar to AA sequence:RefSeq:WP_002351833.1
COORDINATES: similar to AA sequence:RefSeq:WP_011174954.1
GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013182565.1
GO:0008780 - acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity [Evidence IEA]
acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013182566.1
COORDINATES: similar to AA sequence:RefSeq:WP_011174951.1
GO:0008759 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity [Evidence IEA]
UDP-3-O-acyl-N-acetylglucosamine deacetylase
COORDINATES: protein motif:HMM:TIGR00546.1
GO:0042158 - lipoprotein biosynthetic process [Evidence IEA]; GO:0006497 - protein lipidation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011174947.1
RsmB/NOP family class I SAM-dependent RNA methyltransferase
COORDINATES: protein motif:HMM:NF025010.2
SurA N-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR00755.1
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: protein motif:HMM:NF016056.2
DCC1-like thiol-disulfide oxidoreductase family protein
COORDINATES: protein motif:HMM:NF015595.2
COORDINATES: protein motif:HMM:NF012970.2
D-alanyl-D-alanine carboxypeptidase family protein
COORDINATES: protein motif:HMM:NF024488.2
COORDINATES: protein motif:HMM:NF015338.2
endonuclease/exonuclease/phosphatase family protein
COORDINATES: protein motif:HMM:NF024970.2
COORDINATES: protein motif:HMM:NF016290.2
GO:0043165 - Gram-negative-bacterium-type cell outer membrane assembly [Evidence IEA]
COORDINATES: protein motif:HMM:NF024915.2
outer membrane protein assembly factor BamD
COORDINATES: similar to AA sequence:RefSeq:WP_011174939.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013925436.1
MFS transporter family glucose-6-phosphate receptor UhpC
COORDINATES: similar to AA sequence:RefSeq:WP_011174935.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002307075.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013509.2
COORDINATES: similar to AA sequence:RefSeq:WP_013925618.1
tRNA (cytidine(34)-2'-O)-methyltransferase
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01378.1
GO:0004788 - thiamine diphosphokinase activity [Evidence IEA]
GO:0006772 - thiamine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013702.2
lysophospholipid acyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011174869.1
GO:0004127 - cytidylate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013327.2
COORDINATES: similar to AA sequence:RefSeq:WP_011174871.1
GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013181418.1
GO:0004019 - adenylosuccinate synthase activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013944522.1
COORDINATES: similar to AA sequence:RefSeq:WP_013944521.1
COORDINATES: protein motif:HMM:TIGR01643.1
COORDINATES: similar to AA sequence:RefSeq:WP_013182729.1
COORDINATES: similar to AA sequence:RefSeq:WP_013182730.1
GO:0008297 - single-stranded DNA exodeoxyribonuclease activity [Evidence IEA]
single-stranded-DNA-specific exonuclease RecJ
COORDINATES: protein motif:HMM:NF017743.2
class I SAM-dependent RNA methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013924299.1
COORDINATES: similar to AA sequence:RefSeq:WP_011174796.1
COORDINATES: similar to AA sequence:RefSeq:WP_013944535.1
COORDINATES: similar to AA sequence:RefSeq:WP_013944534.1
COORDINATES: protein motif:HMM:NF017470.2
COORDINATES: similar to AA sequence:RefSeq:WP_013924294.1
GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012402.2
COORDINATES: similar to AA sequence:RefSeq:WP_011174777.1
GO:0008685 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity [Evidence IEA]
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_011174779.1
GO:0008760 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity [Evidence IEA]
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
COORDINATES: protein motif:HMM:NF016887.2
COORDINATES: similar to AA sequence:RefSeq:WP_013924079.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006339745.1
GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013942874.1
COORDINATES: similar to AA sequence:RefSeq:WP_006340668.1
COORDINATES: similar to AA sequence:RefSeq:WP_013182753.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
COORDINATES: similar to AA sequence:RefSeq:WP_006340670.1
ribosome biogenesis GTP-binding protein YihA/YsxC
COORDINATES: similar to AA sequence:RefSeq:WP_006340671.1
COORDINATES: similar to AA sequence:RefSeq:WP_011174789.1
COORDINATES: similar to AA sequence:RefSeq:WP_006340058.1
COORDINATES: protein motif:HMM:NF013506.2
COORDINATES: similar to AA sequence:RefSeq:WP_013924504.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006261 - DNA-templated DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00152.1
GO:0004140 - dephospho-CoA kinase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006341332.1
GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013408.2
COORDINATES: similar to AA sequence:RefSeq:WP_013942797.1
COORDINATES: similar to AA sequence:RefSeq:WP_013944576.1
COORDINATES: protein motif:HMM:NF012692.2
COORDINATES: protein motif:HMM:NF013871.2
COORDINATES: protein motif:HMM:NF018884.2
GO:0016791 - phosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006341695.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
ribosome small subunit-dependent GTPase A
COORDINATES: similar to AA sequence:RefSeq:WP_016387099.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013182899.1
COORDINATES: protein motif:HMM:NF014136.2
COORDINATES: similar to AA sequence:RefSeq:WP_013182898.1
COORDINATES: similar to AA sequence:RefSeq:WP_011174575.1
COORDINATES: protein motif:HMM:NF018076.2
50S ribosomal protein L11 methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011174580.1
COORDINATES: similar to AA sequence:RefSeq:WP_013182887.1
COORDINATES: similar to AA sequence:RefSeq:WP_013944604.1
COORDINATES: similar to AA sequence:RefSeq:WP_006340435.1
bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_013944607.1
COORDINATES: similar to AA sequence:RefSeq:WP_006340436.1
COORDINATES: protein motif:HMM:TIGR02395.1
GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011174621.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: protein motif:HMM:NF006667.0
COORDINATES: similar to AA sequence:RefSeq:WP_011174724.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006340608.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0050797 - thymidylate synthase (FAD) activity [Evidence IEA]
GO:0006231 - dTMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013925718.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004655 - porphobilinogen synthase activity [Evidence IEA]
GO:0033014 - tetrapyrrole biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF017857.2
COORDINATES: similar to AA sequence:RefSeq:WP_011174645.1
NADH:ubiquinone reductase (Na(+)-transporting) subunit A
COORDINATES: protein motif:HMM:NF004969.0
GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013181184.1
GO:0016462 - pyrophosphatase activity [Evidence IEA]
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
COORDINATES: protein motif:HMM:NF017774.2
COORDINATES: similar to AA sequence:RefSeq:WP_013944668.1
COORDINATES: protein motif:HMM:NF013098.2
COORDINATES: similar to AA sequence:RefSeq:WP_013944665.1
COORDINATES: protein motif:HMM:TIGR02727.1
GO:0030272 - 5-formyltetrahydrofolate cyclo-ligase activity [Evidence IEA]
GO:0006730 - one-carbon metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011176531.1
COORDINATES: similar to AA sequence:RefSeq:WP_013182998.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012911.2
COORDINATES: similar to AA sequence:RefSeq:WP_013944684.1
COORDINATES: similar to AA sequence:RefSeq:WP_013944683.1
COORDINATES: protein motif:HMM:NF016115.2
COORDINATES: protein motif:HMM:NF004562.0
COORDINATES: protein motif:HMM:NF017832.2
COORDINATES: similar to AA sequence:RefSeq:WP_013182969.1
COORDINATES: similar to AA sequence:RefSeq:WP_013944698.1
COORDINATES: similar to AA sequence:RefSeq:WP_013944695.1
COORDINATES: protein motif:HMM:NF014200.2
GO:0004175 - endopeptidase activity [Evidence IEA]; GO:0009002 - serine-type D-Ala-D-Ala carboxypeptidase activity [Evidence IEA]
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
COORDINATES: protein motif:HMM:NF024991.2
COORDINATES: similar to AA sequence:RefSeq:WP_013935007.1
COORDINATES: similar to AA sequence:RefSeq:WP_013944707.1
COORDINATES: similar to AA sequence:RefSeq:WP_013944706.1
COORDINATES: protein motif:HMM:NF040127.1
COORDINATES: similar to AA sequence:RefSeq:WP_013935028.1