Psychrobacter cryohalolentis strain FDAARGOS_308 plasmid unnamed1, complete sequence.
type: Entry
definition: Psychrobacter cryohalolentis strain FDAARGOS_308 plasmid unnamed1, complete sequence.
sequence version: NZ_CP022042.2
sequence date: 2022-11-30
sequence: sequence
division: CON
label: NZ_CP022042.2
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN06173321
keyword: RefSeq
source: Psychrobacter cryohalolentis
organism: Psychrobacter cryohalolentis
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Moraxellales; Moraxellaceae; Psychrobacter.
reference: 1
reference: 2
reference: 3
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP022042.2.\n\nOn Mar 13, 2018 this sequence version replaced NZ_CP022042.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: CA v. 8.2\nGenome Coverage :: 521.834x\nSequencing Technology :: PacBio; Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 11/30/2022 03:51:31\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,618\nCDSs (total) :: 2,549\nGenes (coding) :: 2,523\nCDSs (with protein) :: 2,523\nGenes (RNA) :: 69\nrRNAs :: 5, 5, 5 (5S, 16S, 23S)\ncomplete rRNAs :: 5, 5, 5 (5S, 16S, 23S)\ntRNAs :: 50\nncRNAs :: 4\nPseudo Genes (total) :: 26\nCDSs (without protein) :: 26\nPseudo Genes (ambiguous residues) :: 0 of 26\nPseudo Genes (frameshifted) :: 7 of 26\nPseudo Genes (incomplete) :: 21 of 26\nPseudo Genes (internal stop) :: 8 of 26\nPseudo Genes (multiple problems) :: 10 of 26\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 41221
topology: circular
so has quality: SO_0000988
location: 1..41221
location: region:1-41221:1
RO_0002162: 330922

NZ_CP022042
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN06173321
type: BioSample
SIO_000068: biosample

1
title: FDA dAtabase for Regulatory Grade micrObial Sequences (FDA-ARGOS): Supporting development and validation of Infectious Disease Dx tests
author: Kerrigan, L.
author: Tallon, L.J.
author: Sadzewicz, L.
author: Sengamalay, N.
author: Ott, S.
author: Godinez, A.
author: Nagaraj, S.
author: Vavikolanu, K.
author: Vyas, G.
author: Nadendla, S.
author: Aluvathingal, J.
author: Sichtig, H.
journal: Unpublished

2
title: Direct Submission
author: Kerrigan, L.
author: Tallon, L.J.
author: Sadzewicz, L.
author: Sengamalay, N.
author: Ott, S.
author: Godinez, A.
author: Nagaraj, S.
author: Vavikolanu, K.
author: Vyas, G.
author: Nadendla, S.
author: Aluvathingal, J.
author: Sichtig, H.
journal: Submitted (09-DEC-2017) Center for Devices and Radiological Health, US Food and Drug Administration, 10903 New Hampshire Avenue, Silver Spring, MD 20993-0002, USA
comments: Sequence update by submitter

3
title: Direct Submission
author: Kerrigan, L.
author: Tallon, L.J.
author: Sadzewicz, L.
author: Sengamalay, N.
author: Ott, S.
author: Godinez, A.
author: Nagaraj, S.
author: Vavikolanu, K.
author: Nadendla, S.
author: George, J.
author: Sichtig, H.
journal: Submitted (20-JUN-2017) Center for Devices and Radiological Health, US Food and Drug Administration, 10903 New Hampshire Avenue, Silver Spring, MD 20993-0002, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41221:1
position: 41221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-41221:1:source
so part of: sequence
organism: Psychrobacter cryohalolentis
mol type: genomic DNA
strain: FDAARGOS_308
isolation source: permafrost
culture collection: ATCC:BAA-1226D-5
culture collection: FDA:FDAARGOS_308
plasmid: unnamed1
country: Russia: Kolyma, Lowlands, Siberia
collection date: 2001-06

330922
type: Taxonomy
SIO_000068: taxonomy

CEP87_RS00005
type: Gene
subclass of: SO_0000704
RO_0002162: 330922
locus tag: CEP87_RS00005
old locus tag: CEP87_00005
so part of: sequence
location: 103..672
location: region:103-672:1
so has part: feature:103-672:1:exon
subclass of: SO_0000010

position:103:1
position: 103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:672:1
position: 672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103-672:1:exon

CEP87_RS00005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 330922
locus tag: CEP87_RS00005
old locus tag: CEP87_00005
inference: COORDINATES: protein motif:HMM:NF015378.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PepSY domain-containing protein
translation: MKKLSTLKKPLVMALSVASFSIASVSASQAAPAVNEVTAASQSKISLEQALVLANKAVKGDIISADFDQEYRNANSHYDINIVTNNNEQEVSVNANTGKVTKGDTERLDKEDLAEYKAMKQSKVSLSQAIKKANQTLKGKVLEVGFDMDFGKPVYKVEIGKGNQIHKVVVDSMTGKITRSQVSDVDRDD
SIO_010081: CEP87_RS00005
subclass of: SO_0000673
so part of: CEP87_RS00005
location: 103..672
location: region:103-672:1
so has part: feature:103-672:1:exon

WP_011512356.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103-672:1:exon

CEP87_RS00010
type: Gene
subclass of: SO_0000704
RO_0002162: 330922
locus tag: CEP87_RS00010
old locus tag: CEP87_00010
so part of: sequence
location: complement(1320..1763)
location: region:1320-1763:-1
so has part: feature:1320-1763:-1:exon
subclass of: SO_0000010

position:1320:-1
position: 1320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1763:-1
position: 1763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1320-1763:-1:exon

CEP87_RS00010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 330922
locus tag: CEP87_RS00010
old locus tag: CEP87_00010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011512578.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MgtC/SapB family protein
translation: MFEFDLNLKLMVYHLIQLAIAFVLSLPIALNREMKDKGAGLRTFPLVSIASCAFMLVAVDIYHGGAAEPEARIMYAIITGMGFIGGGAIFKGDNTVKGTATAASLWNTAAIGISVAYGRYEIAIILSVVNFLILQFSEPFKVKDNLE
SIO_010081: CEP87_RS00010
subclass of: SO_0000673
so part of: CEP87_RS00010
location: complement(1320..1763)
location: region:1320-1763:-1
so has part: feature:1320-1763:-1:exon

WP_011512367.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1320-1763:-1:exon

CEP87_RS00015
type: Gene
subclass of: SO_0000704
RO_0002162: 330922
locus tag: CEP87_RS00015
old locus tag: CEP87_00015
so part of: sequence
location: complement(1820..2743)
location: region:1820-2743:-1
so has part: feature:1820-2743:-1:exon
subclass of: SO_0000010

position:1820:-1
position: 1820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2743:-1
position: 2743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1820-2743:-1:exon

CEP87_RS00015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 330922
locus tag: CEP87_RS00015
old locus tag: CEP87_00015
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011959760.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF808 domain-containing protein
translation: MAGASLLTLLDDISVILDDVSLMTKVAVKKTAGVLGDDLALNAEQVSGVKADRELPVVWAVAKGSFVNKLILVPLALLISAIYPPLVTFLLMCGGVYLAYEGAEKIIHKFWPHILPHDEEQIARLRANADETIDLVAFEKDKIKGAVRTDFILSAEIIVIALGSAVGATLLEKSVMLSIIAIGITVGVYGLVAGIVKMDDLGLYLMKQTNGAKQKIGGILLSAAPKLMKFLSIAGTLAMFLVGGGILVHGISFLHHEVEDLAHLTGIFGSVTTMLLNALVGLAVGVIVVAIVTMIGKLRSNKSSSTH
SIO_010081: CEP87_RS00015
subclass of: SO_0000673
so part of: CEP87_RS00015
location: complement(1820..2743)
location: region:1820-2743:-1
so has part: feature:1820-2743:-1:exon

WP_011512373.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1820-2743:-1:exon

CEP87_RS00020
type: Gene
subclass of: SO_0000704
RO_0002162: 330922
locus tag: CEP87_RS00020
old locus tag: CEP87_00020
so part of: sequence
location: complement(2803..3327)
location: region:2803-3327:-1
so has part: feature:2803-3327:-1:exon
subclass of: SO_0000010

position:2803:-1
position: 2803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3327:-1
position: 3327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2803-3327:-1:exon

CEP87_RS00020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 330922
locus tag: CEP87_RS00020
old locus tag: CEP87_00020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020443929.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TIGR00645 family protein
translation: MLKKAEQRLEKTIFNSRWLLAPFYLGLVLGIILLFIKFFQELWHMTTHVFSASEADVIVGTLALIDMSLVASLLLIIIFSGYEIFVSKIDTGDHEDRPEWMGKINFSGLKLKVIGAIVAISAIDLLKSFMDIPKEMSEGDADRLMWKVIIHMTFVLSGLLFALMDKIVGDTKKH
SIO_010081: CEP87_RS00020
subclass of: SO_0000673
so part of: CEP87_RS00020
location: complement(2803..3327)
location: region:2803-3327:-1
so has part: feature:2803-3327:-1:exon

WP_011512374.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2803-3327:-1:exon

CEP87_RS00025
type: Gene
subclass of: SO_0000704
RO_0002162: 330922
locus tag: CEP87_RS00025
old locus tag: CEP87_00025
so part of: sequence
location: complement(3490..4554)
location: region:3490-4554:-1
so has part: feature:3490-4554:-1:exon
subclass of: SO_0000010

position:3490:-1
position: 3490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4554:-1
position: 4554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3490-4554:-1:exon

CEP87_RS00025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 330922
locus tag: CEP87_RS00025
old locus tag: CEP87_00025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007115784.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF475 domain-containing protein
translation: MRHFYLDFIFTAIALAIAAWWGYSHGGMGGLIATLSITAILAVMEISLSFDNAVVNASVLKGWDEFWKKIFLTVGILIAVFGMRLVFPIVIVAVTADLGMMQVIDLALNDPKEYSARLMAHHAEISAFGGIFLLLVFLNFIFDDKEVHWFDWLESRLAKLGKVDAMSVFVALIVLMIAVSFANPEQSAAVLIAGIWGILVYLGVQVVSGMLEGDLEEELDAQGNSTGAATSAIMKGGIIGFLYLEVLDASFSFDGVIGAFAITNDVIVIMLGLAIGAMFVRSMTIFLVDKGTLDEFVYLEHGAHYAIGALAIIMLLSVKFHVPELITGLIGIAFIGWALLASLKHRKQQAKLTA
SIO_010081: CEP87_RS00025
subclass of: SO_0000673
so part of: CEP87_RS00025
location: complement(3490..4554)
location: region:3490-4554:-1
so has part: feature:3490-4554:-1:exon

WP_011512375.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3490-4554:-1:exon

CEP87_RS00030
type: Gene
subclass of: SO_0000704
RO_0002162: 330922
locus tag: CEP87_RS00030
old locus tag: CEP87_00030
so part of: sequence
location: complement(5007..6779)
location: region:5007-6779:-1
so has part: feature:5007-6779:-1:exon
subclass of: SO_0000010

position:5007:-1
position: 5007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6779:-1
position: 6779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5007-6779:-1:exon

CEP87_RS00030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 330922
locus tag: CEP87_RS00030
old locus tag: CEP87_00030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010199704.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: potassium/proton antiporter
translation: MDTLNIVYLVGAVLIFASIMASTLSARLGVPLLLLFLVVGMLAGEEGILGIEFSQYAIANFVGQAALACILLDGGLRTSVKSFRVGLKPAITLATWGVLATVMILGVFVTWLLDVDWRFGLLLAAIVGSTDAAAVFSLLRNGGVKLNDRVQATLELESGANDPLAILLVTGLIALNVDPAGQTALGFLGLLLQQLSFGLGMGLFFGYFLSRLLPKIHLAEGMYAILIMSAGLAVFSATNLLGGSGFLAVFIAGIMIGNHKVRSTEHVMRVMDSFAWLSQAVLFVVLGLLVTPSNVLEVWPYSVAIAAFMILVARPIAVYTSVLPFKFKNKEIGFISWVGLRGAVPITLAMLPVIAGVDNAFMLFDIAFGVVVLSLVLQGTTIPFMANLFKVRIPNNKGPKEEHEVWVSDRASITLYEFEVKLGAFAIGRHPRDISARISPEGIHVFALVRGQQILAINEETKLKFGDSVWYAMSGDYADQIANVFNDTTLDRRAIDDFYGDWMLSPSVKLKDVPFFTDRMKFESLEDTLNTKNMWEQTVAEYIKDSLKMAPVAGDTVAINEEWLLVIKEVDDQGRLRTIGLKQLEGPAVA
SIO_010081: CEP87_RS00030
subclass of: SO_0000673
so part of: CEP87_RS00030
location: complement(5007..6779)
location: region:5007-6779:-1
so has part: feature:5007-6779:-1:exon

WP_011512376.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5007-6779:-1:exon

CEP87_RS00035
type: Gene
subclass of: SO_0000704
RO_0002162: 330922
locus tag: CEP87_RS00035
old locus tag: CEP87_00035
so part of: sequence
location: 6952..7311
location: region:6952-7311:1
so has part: feature:6952-7311:1:exon
subclass of: SO_0000010

position:6952:1
position: 6952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7311:1
position: 7311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6952-7311:1:exon

CEP87_RS00035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 330922
locus tag: CEP87_RS00035
old locus tag: CEP87_00035
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKETLTGLSIITFAAFYIWIQNGSNPSDKKRNTELEQAQKTSKIALLTKCQKAVQPMLKGFKSMDIKRKNTDYRRLNNGNFEVITHYYAEDSLDAAPLIIVDCLFDKDGSLLETGQVK
SIO_010081: CEP87_RS00035
subclass of: SO_0000673
so part of: CEP87_RS00035
location: 6952..7311
location: region:6952-7311:1
so has part: feature:6952-7311:1:exon

WP_041753786.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6952-7311:1:exon

CEP87_RS00040
type: Gene
subclass of: SO_0000704
RO_0002162: 330922
locus tag: CEP87_RS00040
old locus tag: CEP87_00040
so part of: sequence
location: complement(7704..8006)
location: region:7704-8006:-1
so has part: feature:7704-8006:-1:exon
subclass of: SO_0000010

position:7704:-1
position: 7704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8006:-1
position: 8006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7704-8006:-1:exon

CEP87_RS00040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 330922
locus tag: CEP87_RS00040
old locus tag: CEP87_00040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001140617.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: XRE family transcriptional regulator
translation: MTKTLQEMLAERSLDSQARIKQLAEQLLLENQLSRIREELEISQKELAQTMGIKQPSLSAIENRGNDLKISTMKKYVEAMGGKLRIDVELPTGKHIGFNV
SIO_010081: CEP87_RS00040
subclass of: SO_0000673
so part of: CEP87_RS00040
location: complement(7704..8006)
location: region:7704-8006:-1
so has part: feature:7704-8006:-1:exon

WP_011512377.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7704-8006:-1:exon

CEP87_RS00045
type: Gene
subclass of: SO_0000704
RO_0002162: 330922
locus tag: CEP87_RS00045
old locus tag: CEP87_00045
so part of: sequence
location: complement(8008..8355)
location: region:8008-8355:-1
so has part: feature:8008-8355:-1:exon
subclass of: SO_0000010

position:8008:-1
position: 8008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8355:-1
position: 8355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8008-8355:-1:exon

CEP87_RS00045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 330922
locus tag: CEP87_RS00045
old locus tag: CEP87_00045
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005065055.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MWTVITTELFNQWFDQQDESTQEKVLAALVVLEQQGPSLGRPLVDTVYDSKFTNMKELRIQHRGKPLRAFFAFDPKRQAIVLCIGDKGNRKRFYKEMLATADQQYECHLRTLGDP
SIO_010081: CEP87_RS00045
subclass of: SO_0000673
so part of: CEP87_RS00045
location: complement(8008..8355)
location: region:8008-8355:-1
so has part: feature:8008-8355:-1:exon

WP_011512335.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8008-8355:-1:exon

CEP87_RS00050
type: Gene
subclass of: SO_0000704
RO_0002162: 330922
locus tag: CEP87_RS00050
old locus tag: CEP87_00050
so part of: sequence
location: 8608..9204
location: region:8608-9204:1
so has part: feature:8608-9204:1:exon
subclass of: SO_0000010

position:8608:1
position: 8608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9204:1
position: 9204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8608-9204:1:exon

CEP87_RS00050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 330922
locus tag: CEP87_RS00050
old locus tag: CEP87_00050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011959997.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MTVRIYVRASTKDQDAKRALSDLINFSQSYDDNHVEYVEHFSGTKLDRPALTLLLSDAEEGDILLVESVDRLSRLSQDDFSILKQRIKDKGLRLVVADLPTTHTMSDGMTGEILKVINDMLIDLLATMAKLDNDKRRERIKQGLANSGYKPTGKKANTVKHNRIRALASQNNMTKEEIAKAVGVGVATVYRVLKQVNS
SIO_010081: CEP87_RS00050
subclass of: SO_0000673
so part of: CEP87_RS00050
location: 8608..9204
location: region:8608-9204:1
so has part: feature:8608-9204:1:exon

WP_011512336.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8608-9204:1:exon

CEP87_RS00055
type: Gene
subclass of: SO_0000704
RO_0002162: 330922
locus tag: CEP87_RS00055
old locus tag: CEP87_00055
so part of: sequence
location: 9372..10952
location: region:9372-10952:1
so has part: feature:9372-10952:1:exon
subclass of: SO_0000010

position:9372:1
position: 9372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10952:1
position: 10952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9372-10952:1:exon

CEP87_RS00055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 330922
locus tag: CEP87_RS00055
old locus tag: CEP87_00055
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018573799.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fic family protein
translation: MNTPTSDPIGAAWLIRHASIELVSPLYVSSSIGGRRQTYKDGDVIHNAYQETARPLDTIIAHLQFHMRHEVLSLELLTRLFEQIGADDVQAWVNAEPTGSYARRMAFLYEWLMGQQLAVPSNLGGNYVDALDAKKQVTSSPAHVIKNARWRINDNLAGTRHFCPILVKTEAFTQAAALDIAMMVDKLNDEFGQDLLMRASVWMTLRESKASFTIEGEGKELKRIERFADVMARRTGKGDIPLDPESLAELQQEILGSKTIIQQYGIRQSPVFVSHTQVNGFKEIVHYIAPPADDIAEKLKGLQAFMEKTEGQSALIRSAVASFAFVYIHPLADGNGRVHRFLINDVLRRDQVIHEPIILPISQAIAEHPSDRHAYDKILDRVSVPLMEQIRDHYSFNKQVITYPDGIRSNLNFENTHLIQPAWRFMDLTPHVQYLSGLIAHVIEKEMHNESQYLRKHDHARLAIKEIVEMPNSYADRIIRSMLQNKGVKSNKLLKDYPFLANNEVWDDIFSVVVETFKDEADGLNS
SIO_010081: CEP87_RS00055
subclass of: SO_0000673
so part of: CEP87_RS00055
location: 9372..10952
location: region:9372-10952:1
so has part: feature:9372-10952:1:exon

WP_011512337.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9372-10952:1:exon

CEP87_RS00060
type: Gene
subclass of: SO_0000704
RO_0002162: 330922
locus tag: CEP87_RS00060
old locus tag: CEP87_00060
pseudo: true
so part of: sequence
location: complement(<11281..11733)
location: region:11281-11733:-1
so has part: feature:11281-11733:-1:exon
subclass of: SO_0000010

position:11281:-1
position: 11281
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:11733:-1
position: 11733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11281-11733:-1:exon

CEP87_RS00060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 330922
locus tag: CEP87_RS00060
old locus tag: CEP87_00060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011954795.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: recombinase family protein
SIO_010081: CEP87_RS00060
subclass of: SO_0000673
so part of: CEP87_RS00060
location: complement(<11281..11733)
location: region:11281-11733:-1
so has part: feature:11281-11733:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11281-11733:-1:exon

CEP87_RS00065
type: Gene
subclass of: SO_0000704
RO_0002162: 330922
locus tag: CEP87_RS00065
old locus tag: CEP87_00065
so part of: sequence
location: complement(11853..12308)
location: region:11853-12308:-1
so has part: feature:11853-12308:-1:exon
subclass of: SO_0000010

position:11853:-1
position: 11853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12308:-1
position: 12308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11853-12308:-1:exon

CEP87_RS00065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 330922
locus tag: CEP87_RS00065
old locus tag: CEP87_00065
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011514111.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MerR family transcriptional regulator
translation: MPSHSSFLLIGALAAQANTTKDTVRHYYEMGLLKSRKCQAGSRLYTEFHPECVERIEMIKSAQAIGFNLNEFKEFLNDYYDGTIDVDKQLSVITQKLAETKRQQNNIINMINHLDAHHKVLKDIKMQNTGRLSKTEWEERIAEQLLKNDKS
SIO_010081: CEP87_RS00065
subclass of: SO_0000673
so part of: CEP87_RS00065
location: complement(11853..12308)
location: region:11853-12308:-1
so has part: feature:11853-12308:-1:exon

WP_011512339.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11853-12308:-1:exon

CEP87_RS00070
type: Gene
subclass of: SO_0000704
RO_0002162: 330922
locus tag: CEP87_RS00070
old locus tag: CEP87_00070
so part of: sequence
location: complement(12381..12752)
location: region:12381-12752:-1
so has part: feature:12381-12752:-1:exon
subclass of: SO_0000010

position:12381:-1
position: 12381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12752:-1
position: 12752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12381-12752:-1:exon

CEP87_RS00070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 330922
locus tag: CEP87_RS00070
old locus tag: CEP87_00070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013797173.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTWKSIEFNERFLASWISSFALCVVFIAPIGGIIAMLIHKALAAILPNISKVKMNVIFGLCMAVTMESIMAVITTINTNGFSDWNSLAAVWATTLLAALPIGIVFSVIVSLIIKPKLEVMLAE
SIO_010081: CEP87_RS00070
subclass of: SO_0000673
so part of: CEP87_RS00070
location: complement(12381..12752)
location: region:12381-12752:-1
so has part: feature:12381-12752:-1:exon

WP_226939312.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12381-12752:-1:exon

CEP87_RS00080
type: Gene
subclass of: SO_0000704
RO_0002162: 330922
locus tag: CEP87_RS00080
old locus tag: CEP87_00080
so part of: sequence
location: complement(13605..14768)
location: region:13605-14768:-1
so has part: feature:13605-14768:-1:exon
subclass of: SO_0000010

position:13605:-1
position: 13605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14768:-1
position: 14768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13605-14768:-1:exon

CEP87_RS00080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 330922
locus tag: CEP87_RS00080
old locus tag: CEP87_00080
EC number: 1.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:YP_004994878.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zinc-dependent alcohol dehydrogenase
translation: MRALTYHGAKDVRVDNVPEPKLQEKDDVILRVTATAICGSDLHLYRGKMPATEEGDIFGHEFMGVVEEVGSEVTAVKKGDRVVIPFVIACGNCFFCQHDLMSACETTNTGPGAAINKKIIPPPAALFGFSHLYGGIPGGQAEFVRVPKGNFNPFKVNGSLSDEKVLFLSDILPTAWQAVTNANITKGSTVAIYGAGPVGLLSAACAKMLGAEQIFVVDHNDYRLQYAKDTYGAIPVNFDKVDAAEFIIEQTKGHRGVDSVIDAIGFEAKGSMLETIMTNLKIEGSSGAALRQCIAAVRRGGVVSVPGVYAGPIHGFLFGDAFDKGLTFKMGQTHVHKYLPQLLEYIENGDLSPEAIITHRMNLSDAAKGYEIFEKREEECRKVILTP
SIO_010081: CEP87_RS00080
subclass of: SO_0000673
so part of: CEP87_RS00080
location: complement(13605..14768)
location: region:13605-14768:-1
so has part: feature:13605-14768:-1:exon

WP_011512340.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13605-14768:-1:exon

CEP87_RS00090
type: Gene
subclass of: SO_0000704
RO_0002162: 330922
locus tag: CEP87_RS00090
old locus tag: CEP87_00090
so part of: sequence
location: complement(15519..16400)
location: region:15519-16400:-1
so has part: feature:15519-16400:-1:exon
subclass of: SO_0000010

position:15519:-1
position: 15519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16400:-1
position: 16400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15519-16400:-1:exon

CEP87_RS00090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 330922
locus tag: CEP87_RS00090
old locus tag: CEP87_00090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004917957.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MLLLPEIYETLPYKPYCTDGLGNLVIRPRQTAVKMRYIQHNPPCMTHFICLDIDHEHGAMRWAEEYLPPPRWTSQNPSNGHAHIVYELKTPVCTSEHGSRKALDYLAKIQAGLVRASRADVGYTNFITKNPLHEHWRTEVWTKEAYELNYLAEFVDLRPLTSNEKEYGLGRNCSLFDTVRHWAYSAIREHRGKTWDQWYSSVLKHAQSVNMMFSEPLPYSEIKATAKSIAKYCWKRDAYHYNEFIYRQALKGSKGGKVSKRKPIATSEQSMKPWEDLGISRRTYYNHKKLGKL
SIO_010081: CEP87_RS00090
subclass of: SO_0000673
so part of: CEP87_RS00090
location: complement(15519..16400)
location: region:15519-16400:-1
so has part: feature:15519-16400:-1:exon

WP_011512341.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15519-16400:-1:exon

CEP87_RS00095
type: Gene
subclass of: SO_0000704
RO_0002162: 330922
locus tag: CEP87_RS00095
old locus tag: CEP87_00095
so part of: sequence
location: complement(16744..17625)
location: region:16744-17625:-1
so has part: feature:16744-17625:-1:exon
subclass of: SO_0000010

position:16744:-1
position: 16744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17625:-1
position: 17625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16744-17625:-1:exon

CEP87_RS00095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 330922
locus tag: CEP87_RS00095
old locus tag: CEP87_00095
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015589626.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS982 family transposase
translation: MPIDEFIINIYLMVEQYYKIVVTKPLRSAGYAPKLSDPEVICMEMVGEFLHLDQEKQIWQYFTQHWQDWFPAIGSYPNFAKHCANLWQVKQQIQDKVSQIEGRDNIHFMDGFPIPVCHYGRAYRHKNYQDLAAFSYCAAKQERYYGFEGHLLVNLSGMIKGFTFAPANVDERAVAPEITTHIHGLLGADKGYISPSLTSYYDAQGVDLQTPLRANMKEDRPKPVVRRLMKARRIVETVIGQLSERFNIQRVRARDLWHLSHRLIRKILSHNLCFVLNKKLGNPPLQFDLLISS
SIO_010081: CEP87_RS00095
subclass of: SO_0000673
so part of: CEP87_RS00095
location: complement(16744..17625)
location: region:16744-17625:-1
so has part: feature:16744-17625:-1:exon

WP_011512342.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16744-17625:-1:exon

CEP87_RS00100
type: Gene
subclass of: SO_0000704
RO_0002162: 330922
locus tag: CEP87_RS00100
old locus tag: CEP87_00100
so part of: sequence
location: 18016..18825
location: region:18016-18825:1
so has part: feature:18016-18825:1:exon
subclass of: SO_0000010

position:18016:1
position: 18016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18825:1
position: 18825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18016-18825:1:exon

CEP87_RS00100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 330922
locus tag: CEP87_RS00100
old locus tag: CEP87_00100
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTQATYQTPNAKPQLTVCIINSSGNSGKTISGRWLVKPRLQDPKYYRIGFNDRNISGDEIFATVDKLRDVHVELMMGTSVIVEVEISEFERTIDRMDQMMGCHEDYDFFLVPVVDSSPKLIADSIGTIKILVNMGVPPHKIRILFNRDPSRHSAYDYFEELTDTLDELKIPYDLNAQFQCYDFYEKLEALNLSFEDLTEHNLIDAKAHLKKIKEKGKIHRLTDTQKAAKAFYAQVVLVQRAALAYKSEHDEVFEILFQNYPESDMAESC
SIO_010081: CEP87_RS00100
subclass of: SO_0000673
so part of: CEP87_RS00100
location: 18016..18825
location: region:18016-18825:1
so has part: feature:18016-18825:1:exon

WP_011512343.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18016-18825:1:exon

CEP87_RS00105
type: Gene
subclass of: SO_0000704
RO_0002162: 330922
locus tag: CEP87_RS00105
old locus tag: CEP87_00105
so part of: sequence
location: 19035..19670
location: region:19035-19670:1
so has part: feature:19035-19670:1:exon
subclass of: SO_0000010

position:19035:1
position: 19035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19670:1
position: 19670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19035-19670:1:exon

CEP87_RS00105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 330922
locus tag: CEP87_RS00105
old locus tag: CEP87_00105
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007117279.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family partition ATPase
translation: MKVIAVLNQKGGSGKTTIATQLARGLQLQGHSVLLVDSDQQGSARDWRAVDEDNPVPVIGLDRPTLDKDLKNVSDKEFVVIDGSPQATTLAISAIKAADFILIPVQPSPYDVWATSDLVDLVKQRIEMTDGKLKAAFVVSRAIQNTNIGKEVATVLLDYGLPVLDTRIMQRVSYPNSASLGKTVFDTESANSNAVQEMTALVNEVKTFFDE
SIO_010081: CEP87_RS00105
subclass of: SO_0000673
so part of: CEP87_RS00105
location: 19035..19670
location: region:19035-19670:1
so has part: feature:19035-19670:1:exon

WP_011512344.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19035-19670:1:exon

CEP87_RS00110
type: Gene
subclass of: SO_0000704
RO_0002162: 330922
locus tag: CEP87_RS00110
old locus tag: CEP87_00110
so part of: sequence
location: 19683..19886
location: region:19683-19886:1
so has part: feature:19683-19886:1:exon
subclass of: SO_0000010

position:19683:1
position: 19683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19886:1
position: 19886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19683-19886:1:exon

CEP87_RS00110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 330922
locus tag: CEP87_RS00110
old locus tag: CEP87_00110
inference: COORDINATES: protein motif:HMM:NF020835.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid partition protein ParG
translation: MKAGRPSRDAKNTLDLSDVTNAPKKTVRVNFNLDEEKYILLKQYALNNRKTVTQLLTDMIDEKIVER
SIO_010081: CEP87_RS00110
subclass of: SO_0000673
so part of: CEP87_RS00110
location: 19683..19886
location: region:19683-19886:1
so has part: feature:19683-19886:1:exon

WP_041753792.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19683-19886:1:exon

CEP87_RS00115
type: Gene
subclass of: SO_0000704
RO_0002162: 330922
locus tag: CEP87_RS00115
old locus tag: CEP87_00115
so part of: sequence
location: 20144..21154
location: region:20144-21154:1
so has part: feature:20144-21154:1:exon
subclass of: SO_0000010

position:20144:1
position: 20144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21154:1
position: 21154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20144-21154:1:exon

CEP87_RS00115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 330922
locus tag: CEP87_RS00115
old locus tag: CEP87_00115
inference: COORDINATES: protein motif:HMM:NF024573.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MSNLIKSIRIKRLFDEKDVSWELKKINVLVGKNGLGKSTILRLINAAVTLKQVEDLNLCEEVSVVMKDEEKYTSKKNNLIDIEMLKLVIEELSRFEKNSRKDKNSDSHYVKYKRLSNDELKELTTDLFKKINKNATNYEIEDNDKKLNIKRDNQVFKPKKKMPVEFISTINMSANSVNNVIESDGNKTTFLDVEIDKEVERLNKDHRNKDELQEKFMSSLNNFFEETNKKVEFVDDKIEILLISGKRIDYRNLSSGERQLIFIFLKIINGGVDNSLILMDEPEISLHLSWQEKLLTEITNANSSSQMIIVTHSPALVMDGWLDNFIDIKTITEEVW
SIO_010081: CEP87_RS00115
subclass of: SO_0000673
so part of: CEP87_RS00115
location: 20144..21154
location: region:20144-21154:1
so has part: feature:20144-21154:1:exon

WP_011512346.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20144-21154:1:exon

CEP87_RS00120
type: Gene
subclass of: SO_0000704
RO_0002162: 330922
locus tag: CEP87_RS00120
old locus tag: CEP87_00120
so part of: sequence
location: 21160..22146
location: region:21160-22146:1
so has part: feature:21160-22146:1:exon
subclass of: SO_0000010

position:21160:1
position: 21160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22146:1
position: 22146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21160-22146:1:exon

CEP87_RS00120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 330922
locus tag: CEP87_RS00120
old locus tag: CEP87_00120
inference: COORDINATES: protein motif:HMM:NF025844.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4435 domain-containing protein
translation: MSEFHDFFTSKNFIGAYNVFSSGDIKDKNKGIIYVEDASDYSFWEGFIGYHYPNEYMCRPSSKEGKTVTGKRFLEKIYKDANEKIIIAVDSDYDYIASKVQEDHIFNHNKYVIHTHGFSRESVQIEKDSLDHFFKLCRLTIPNTVNLSSFLNDFSEIAFKGLAKYIVILNRIDYSNIYDSEFNSCFHLLDENMVDENLLISKSGIEKIEKKMDLFFDDKCIYEDDIIKSEYFLNDIGINRDNAYRFISGHVLFDLIKKIHKINLSQLMKHEIKNINKNVTGNEIKDRVNQVKTRFNDSFSFDTYCHMRQVDLEDEVHKFILSAIKNIK
SIO_010081: CEP87_RS00120
subclass of: SO_0000673
so part of: CEP87_RS00120
location: 21160..22146
location: region:21160-22146:1
so has part: feature:21160-22146:1:exon

WP_011512347.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21160-22146:1:exon

CEP87_RS00125
type: Gene
subclass of: SO_0000704
RO_0002162: 330922
locus tag: CEP87_RS00125
old locus tag: CEP87_00125
so part of: sequence
location: complement(22306..22602)
location: region:22306-22602:-1
so has part: feature:22306-22602:-1:exon
subclass of: SO_0000010

position:22306:-1
position: 22306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22602:-1
position: 22602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22306-22602:-1:exon

CEP87_RS00125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 330922
locus tag: CEP87_RS00125
old locus tag: CEP87_00125
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNKVSYKANELPSLSAAQEANLQRLAVLLDHDIDLSDMPEVTDWSSATRGSVVPSDSMVGASSVSPSIIARFQDRAKKTGGNYQDMINDALEEYLLDH
SIO_010081: CEP87_RS00125
subclass of: SO_0000673
so part of: CEP87_RS00125
location: complement(22306..22602)
location: region:22306-22602:-1
so has part: feature:22306-22602:-1:exon

WP_041753794.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22306-22602:-1:exon

CEP87_RS13135
type: Gene
subclass of: SO_0000704
RO_0002162: 330922
locus tag: CEP87_RS13135
pseudo: true
so part of: sequence
location: complement(22589..>22690)
location: region:22589-22690:-1
so has part: feature:22589-22690:-1:exon
subclass of: SO_0000010

position:22589:-1
position: 22589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22690:-1
position: 22690
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22589-22690:-1:exon

CEP87_RS13135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 330922
locus tag: CEP87_RS13135
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015129092.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: BrnT family toxin
SIO_010081: CEP87_RS13135
subclass of: SO_0000673
so part of: CEP87_RS13135
location: complement(22589..>22690)
location: region:22589-22690:-1
so has part: feature:22589-22690:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22589-22690:-1:exon

CEP87_RS00130
type: Gene
subclass of: SO_0000704
RO_0002162: 330922
locus tag: CEP87_RS00130
old locus tag: CEP87_00130
pseudo: true
so part of: sequence
location: complement(<22833..22973)
location: region:22833-22973:-1
so has part: feature:22833-22973:-1:exon
subclass of: SO_0000010

position:22833:-1
position: 22833
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:22973:-1
position: 22973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22833-22973:-1:exon

CEP87_RS00130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 330922
locus tag: CEP87_RS00130
old locus tag: CEP87_00130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006682805.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: BrnT family toxin
SIO_010081: CEP87_RS00130
subclass of: SO_0000673
so part of: CEP87_RS00130
location: complement(<22833..22973)
location: region:22833-22973:-1
so has part: feature:22833-22973:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22833-22973:-1:exon

CEP87_RS00135
type: Gene
subclass of: SO_0000704
RO_0002162: 330922
locus tag: CEP87_RS00135
old locus tag: CEP87_00135
pseudo: true
so part of: sequence
location: complement(<23015..23170)
location: region:23015-23170:-1
so has part: feature:23015-23170:-1:exon
subclass of: SO_0000010

position:23015:-1
position: 23015
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:23170:-1
position: 23170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23015-23170:-1:exon

CEP87_RS00135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 330922
locus tag: CEP87_RS00135
old locus tag: CEP87_00135
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004282256.1
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelB/DinJ family antitoxin
SIO_010081: CEP87_RS00135
subclass of: SO_0000673
so part of: CEP87_RS00135
location: complement(<23015..23170)
location: region:23015-23170:-1
so has part: feature:23015-23170:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23015-23170:-1:exon

CEP87_RS00140
type: Gene
subclass of: SO_0000704
RO_0002162: 330922
locus tag: CEP87_RS00140
old locus tag: CEP87_00140
so part of: sequence
location: complement(23272..23532)
location: region:23272-23532:-1
so has part: feature:23272-23532:-1:exon
subclass of: SO_0000010

position:23272:-1
position: 23272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23532:-1
position: 23532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23272-23532:-1:exon

CEP87_RS00140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 330922
locus tag: CEP87_RS00140
old locus tag: CEP87_00140
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSIRGVSVASNHFMMFEEAQREYYRQMGRLNTFGLENEAHSDSIRKKMFELKDEESMLRECSASELYVIQKQLKQRIDNFLHELNE
SIO_010081: CEP87_RS00140
subclass of: SO_0000673
so part of: CEP87_RS00140
location: complement(23272..23532)
location: region:23272-23532:-1
so has part: feature:23272-23532:-1:exon

WP_011512370.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23272-23532:-1:exon

CEP87_RS00145
type: Gene
subclass of: SO_0000704
RO_0002162: 330922
locus tag: CEP87_RS00145
old locus tag: CEP87_00145
so part of: sequence
location: complement(23600..24001)
location: region:23600-24001:-1
so has part: feature:23600-24001:-1:exon
subclass of: SO_0000010

position:23600:-1
position: 23600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24001:-1
position: 24001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23600-24001:-1:exon

CEP87_RS00145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 330922
locus tag: CEP87_RS00145
old locus tag: CEP87_00145
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKRTKFSKFRDLYEVIEELAVSYTYEGVVEILAERHDLILTTGTLTNYLYRYRKESKDLSVATDNSSSDIEVKPEVRKQVFVDLYSNDPIQDSNTEPNDESYVQPTHEELDTAMKRFEAKLANKRNRSLLDR
SIO_010081: CEP87_RS00145
subclass of: SO_0000673
so part of: CEP87_RS00145
location: complement(23600..24001)
location: region:23600-24001:-1
so has part: feature:23600-24001:-1:exon

WP_011512350.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23600-24001:-1:exon

CEP87_RS00150
type: Gene
subclass of: SO_0000704
RO_0002162: 330922
locus tag: CEP87_RS00150
old locus tag: CEP87_00150
so part of: sequence
location: 24463..24837
location: region:24463-24837:1
so has part: feature:24463-24837:1:exon
subclass of: SO_0000010

position:24463:1
position: 24463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24837:1
position: 24837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24463-24837:1:exon

CEP87_RS00150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 330922
locus tag: CEP87_RS00150
old locus tag: CEP87_00150
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSTPIVSFRLKPEIYLKLEAIAAEAGQTPGGYLKKKLESDTNNFLEDLQFMKGDISEILHLLQSDDKGSKAVESTSNQNEMMKALMPIVLESLLILREVAAPNKVSNAQRLVDKAGIKAYNSLD
SIO_010081: CEP87_RS00150
subclass of: SO_0000673
so part of: CEP87_RS00150
location: 24463..24837
location: region:24463-24837:1
so has part: feature:24463-24837:1:exon

WP_011512351.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24463-24837:1:exon

CEP87_RS00155
type: Gene
subclass of: SO_0000704
RO_0002162: 330922
gene: repM
locus tag: CEP87_RS00155
old locus tag: CEP87_00155
so part of: sequence
location: 25479..26426
location: region:25479-26426:1
so has part: feature:25479-26426:1:exon
subclass of: SO_0000010

position:25479:1
position: 25479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26426:1
position: 26426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25479-26426:1:exon

CEP87_RS00155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 330922
gene: repM
locus tag: CEP87_RS00155
old locus tag: CEP87_00155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020444561.1
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006270 - DNA replication initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein RepM
translation: MSNKQLIAKDNKLIGASYSLGIPEQRLIFLAIIEAREQKQLIDAKGVLNIRAKSYQEQFKVEKHTSYDALKSATSGLFDAHFEYEDIHEKTGKQARHVIRWVQKISYIDDAGMVELQFTDAVIPLITRLSEQYTEYELKQVSELQSEYSIRLYELMMQWKAVGKTNKISVDDLRRKLGVEPKQYKKMNNFKARVLDHAINQINEHTDIQAEYDQYKDGRAIAGFTFKFKVKKNKVKIAAKVEADNVDRSTIEGLNDKQLGRIARNPSFIADYNDLVSSTSPAGQDMNMWELEMINRLKKDISQFKKRPIREYLEY
SIO_010081: CEP87_RS00155
subclass of: SO_0000673
so part of: CEP87_RS00155
location: 25479..26426
location: region:25479-26426:1
so has part: feature:25479-26426:1:exon

WP_011512352.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25479-26426:1:exon

CEP87_RS00160
type: Gene
subclass of: SO_0000704
RO_0002162: 330922
locus tag: CEP87_RS00160
old locus tag: CEP87_00160
so part of: sequence
location: 26586..27713
location: region:26586-27713:1
so has part: feature:26586-27713:1:exon
subclass of: SO_0000010

position:26586:1
position: 26586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27713:1
position: 27713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26586-27713:1:exon

CEP87_RS00160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 330922
locus tag: CEP87_RS00160
old locus tag: CEP87_00160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000209717.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF262 domain-containing protein
translation: MTDLNKEIDKARHNVRTDSYSMSIGELASMYEDNELEIHPAFQRVFRWSDEQKSNFIESIFLGIPIPSIFVSQRQDGVWDLVDGLQRLSTIFSFMNKLKDEEGSIRDPFTPEATKYLPSLKGRKWGTEDLDSADLLSNNLKLLFKRQKIAVNIIERESDDDAKFELFQRLNTGGSALSPQEVRNCLLIMLNNQAFDFIQALTKDESFQKTVLVTEAKEDQAYYYELVLRFFINRHASDEIRSKHSDVHPYLNNETIRLFDINSDFEYNKEREVFKNTFERIALALGDDAFKKYNPQKDRYEGAFSLPVFEAISTGISFLVESDDYNEDAIVVVIAAKTKELIDNNDFTNSYATRIRPIDRTKIMIGIGRSLFCED
SIO_010081: CEP87_RS00160
subclass of: SO_0000673
so part of: CEP87_RS00160
location: 26586..27713
location: region:26586-27713:1
so has part: feature:26586-27713:1:exon

WP_011512353.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26586-27713:1:exon

CEP87_RS00165
type: Gene
subclass of: SO_0000704
RO_0002162: 330922
locus tag: CEP87_RS00165
old locus tag: CEP87_00165
so part of: sequence
location: 27739..28353
location: region:27739-28353:1
so has part: feature:27739-28353:1:exon
subclass of: SO_0000010

position:27739:1
position: 27739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28353:1
position: 28353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27739-28353:1:exon

CEP87_RS00165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 330922
locus tag: CEP87_RS00165
old locus tag: CEP87_00165
inference: COORDINATES: protein motif:HMM:NF037890.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MAE_28990/MAE_18760 family HEPN-like nuclease
translation: MVSDLTWRRRELTTLKFMIQENSAIHKKNILHRAAIALLYSHWEGHVKHCSLVYLSYLNSLGLHCDQIADNFIQLNLSSYFDVNLSMKSTKNQKAIHDYFSRLSDVTFKVVENKTIDTKSNLNSEVLLNILSQLGLPSNEFELKSTLIDTVLLKNRNAVVHGEMLNADGLRNTYNEIEDDLLYLIETFHNLVNSAAANGLYLKQ
SIO_010081: CEP87_RS00165
subclass of: SO_0000673
so part of: CEP87_RS00165
location: 27739..28353
location: region:27739-28353:1
so has part: feature:27739-28353:1:exon

WP_041753797.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27739-28353:1:exon

CEP87_RS00170
type: Gene
subclass of: SO_0000704
RO_0002162: 330922
locus tag: CEP87_RS00170
old locus tag: CEP87_00170
so part of: sequence
location: complement(28368..29318)
location: region:28368-29318:-1
so has part: feature:28368-29318:-1:exon
subclass of: SO_0000010

position:28368:-1
position: 28368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29318:-1
position: 29318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28368-29318:-1:exon

CEP87_RS00170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 330922
locus tag: CEP87_RS00170
old locus tag: CEP87_00170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007194135.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0009036 - type II site-specific deoxyribonuclease activity [Evidence IEA]
GO process: GO:0009307 - DNA restriction-modification system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BsuBI/PstI family type II restriction endonuclease
translation: MNTQDDHIEAALQIIACLGLPTAQYNERSALTLLALLDLSPGKSWTQVKSPLMGITPIMNWAREHYSKDYAPNTRETVRRQTMHQFCDAGIALYNPDKPDRPVNSPKAVYQIEPHVLTLLRTYGTTSWHSHLERYLADRTSLVERYAKEREQNRIPVRIADGKEITLSPGIHSELIKDIIEDFAERFAPNSILIYAGDTEKKWGYFDKELLKELNVDVGSHGKMPDVVLHYTEKNWLLLVESVTSHGPVDGKRYEELSKLFSESTAGLVYVTAFPNRALMGRYLSEIAWETEVWVADAPSHLIHFNGVRFLGPYSP
SIO_010081: CEP87_RS00170
subclass of: SO_0000673
so part of: CEP87_RS00170
location: complement(28368..29318)
location: region:28368-29318:-1
so has part: feature:28368-29318:-1:exon

WP_011512354.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28368-29318:-1:exon

CEP87_RS00175
type: Gene
subclass of: SO_0000704
RO_0002162: 330922
locus tag: CEP87_RS00175
old locus tag: CEP87_00175
so part of: sequence
location: complement(29318..30784)
location: region:29318-30784:-1
so has part: feature:29318-30784:-1:exon
subclass of: SO_0000010

position:30784:-1
position: 30784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29318-30784:-1:exon

CEP87_RS00175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 330922
locus tag: CEP87_RS00175
old locus tag: CEP87_00175
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001686642.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006304 - DNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Eco57I restriction-modification methylase domain-containing protein
translation: MLQQLDTADSVRLKLARRTTQKHKAELGQFMTPSSVARFMASLFPPSNIKTCRLLDAGAGIGTLTCAFLDRWKANGFGFNDVDVTAFEIDKKLTNYLSQHLNSYDHVTTRIFSDDYIKLATDKGLQDQGYTHVILNPPYKKINSKSAHRLALSSVGIETVNLYSAFIALALGEMAPGGQMVAIIPRSFCNGPYYRPFRDFILERAAIHQMHLFESRSKAFSDDQVLQENIIICLERDGKQGPVTISTSTDDSFSDLTNCEIPFERIVFPDDPERFIHVQTTTEKSAIELSSAVRYSMADIGIKLSTGPVVDFRLKEYLRDRPEEGAVPLIYPAHLKAYKTTWPIPNFKKSNAIVANNDTEKWLYPNGFYCVVKRFSSKEEKRRMVANLINPTDFSEYTMLGFENHLNVFHDNKNGLPEALASGLMVYLNTTAVDEHFRRFSGHTQVNATDLKQMKYPSRENLFKLGEWALEQKNITQESIDAQFRDLI
SIO_010081: CEP87_RS00175
subclass of: SO_0000673
so part of: CEP87_RS00175
location: complement(29318..30784)
location: region:29318-30784:-1
so has part: feature:29318-30784:-1:exon

WP_011512355.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29318-30784:-1:exon

CEP87_RS00180
type: Gene
subclass of: SO_0000704
RO_0002162: 330922
locus tag: CEP87_RS00180
old locus tag: CEP87_00180
so part of: sequence
location: 31061..31537
location: region:31061-31537:1
so has part: feature:31061-31537:1:exon
subclass of: SO_0000010

position:31061:1
position: 31061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31537:1
position: 31537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31061-31537:1:exon

CEP87_RS00180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 330922
locus tag: CEP87_RS00180
old locus tag: CEP87_00180
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDINLNQLYPMILSAVVALIIGKLYEKLPVQEVFTLFGKYQKGSRLKELIRIKKYRLDMRHYLYELQIAQNWFIALIVVAVVNFVFLLGSGFLKYPLWLFMIGMLPTYTIELIWLNKISYVDDLKVYQKGNPEWKKRKQRKVVRKQREKLKQLGQNGA
SIO_010081: CEP87_RS00180
subclass of: SO_0000673
so part of: CEP87_RS00180
location: 31061..31537
location: region:31061-31537:1
so has part: feature:31061-31537:1:exon

WP_011512372.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31061-31537:1:exon

CEP87_RS00185
type: Gene
subclass of: SO_0000704
RO_0002162: 330922
locus tag: CEP87_RS00185
old locus tag: CEP87_00185
so part of: sequence
location: complement(32216..32599)
location: region:32216-32599:-1
so has part: feature:32216-32599:-1:exon
subclass of: SO_0000010

position:32216:-1
position: 32216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32599:-1
position: 32599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32216-32599:-1:exon

CEP87_RS00185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 330922
locus tag: CEP87_RS00185
old locus tag: CEP87_00185
inference: COORDINATES: protein motif:HMM:NF024752.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase family protein
translation: MIVHWKTGLILDVQMSKGSIHDFKLYKDTCPYWLPDNAKLLADSGYQGIAKLHEQSFTPFKKPHGGQLLELCKQANQYLAKFRIMVEHKIGLIKRFKIVAHKYRNRRQRYDLRMKLFASIVNFELGL
SIO_010081: CEP87_RS00185
subclass of: SO_0000673
so part of: CEP87_RS00185
location: complement(32216..32599)
location: region:32216-32599:-1
so has part: feature:32216-32599:-1:exon

WP_105575659.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32216-32599:-1:exon

CEP87_RS00190
type: Gene
subclass of: SO_0000704
RO_0002162: 330922
locus tag: CEP87_RS00190
old locus tag: CEP87_00190
so part of: sequence
location: complement(32608..33051)
location: region:32608-33051:-1
so has part: feature:32608-33051:-1:exon
subclass of: SO_0000010

position:32608:-1
position: 32608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33051:-1
position: 33051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32608-33051:-1:exon

CEP87_RS00190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 330922
locus tag: CEP87_RS00190
old locus tag: CEP87_00190
inference: COORDINATES: protein motif:HMM:NF025000.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase family protein
translation: MPNIDKLLEQNNAGFKRYTGIHKATFYEMLEAMQQQHETQKTKPGRPSVLSLEAQILLALTYWREYRTLYHISMDFGIHESSASRIIRKVEYVLINSGKFELPKKLPSRVDDDINWSVVIVDATETPIERPKKTKETTIAARRNNTP
SIO_010081: CEP87_RS00190
subclass of: SO_0000673
so part of: CEP87_RS00190
location: complement(32608..33051)
location: region:32608-33051:-1
so has part: feature:32608-33051:-1:exon

WP_011512358.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32608-33051:-1:exon

CEP87_RS00195
type: Gene
subclass of: SO_0000704
RO_0002162: 330922
locus tag: CEP87_RS00195
old locus tag: CEP87_00195
pseudo: true
so part of: sequence
location: 33576..34333
location: region:33576-34333:1
so has part: feature:33576-34333:1:exon
subclass of: SO_0000010

position:33576:1
position: 33576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34333:1
position: 34333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33576-34333:1:exon

CEP87_RS00195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 330922
locus tag: CEP87_RS00195
old locus tag: CEP87_00195
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019674095.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5 family transposase
SIO_010081: CEP87_RS00195
subclass of: SO_0000673
so part of: CEP87_RS00195
location: 33576..34333
location: region:33576-34333:1
so has part: feature:33576-34333:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:33576-34333:1:exon

CEP87_RS00200
type: Gene
subclass of: SO_0000704
RO_0002162: 330922
locus tag: CEP87_RS00200
old locus tag: CEP87_00200
so part of: sequence
location: 34535..35338
location: region:34535-35338:1
so has part: feature:34535-35338:1:exon
subclass of: SO_0000010

position:34535:1
position: 34535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35338:1
position: 35338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34535-35338:1:exon

CEP87_RS00200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 330922
locus tag: CEP87_RS00200
old locus tag: CEP87_00200
inference: COORDINATES: protein motif:HMM:TIGR01486.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAD-IIB family hydrolase
translation: MKKRYLVFTDLDGTLLNHQDYSFAPAKEALALLKYRSIPLIIATSKTFSEVVVLQKELGMRQPFIVENGAGIFVPSESVLAREMAFKEEWIKFSKAHSYTELRLFFTHMKRSYSIKGFGDMSVDEVIQHTGLPREESLNAMKRDFSEPFLMQDERELEALKKEANEEGFDIVKGGRFYHLVSLLQDKANAMLTLAHMYEEYYNQKCTKIALGDSANDFTMIKKADIGVLVPLYDGSFSAIGNADIKRADYPGPKGWNSSILEIFDGL
SIO_010081: CEP87_RS00200
subclass of: SO_0000673
so part of: CEP87_RS00200
location: 34535..35338
location: region:34535-35338:1
so has part: feature:34535-35338:1:exon

WP_011512360.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34535-35338:1:exon

CEP87_RS00205
type: Gene
subclass of: SO_0000704
RO_0002162: 330922
locus tag: CEP87_RS00205
old locus tag: CEP87_00205
so part of: sequence
location: 35637..36848
location: region:35637-36848:1
so has part: feature:35637-36848:1:exon
subclass of: SO_0000010

position:35637:1
position: 35637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36848:1
position: 36848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35637-36848:1:exon

CEP87_RS00205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 330922
locus tag: CEP87_RS00205
old locus tag: CEP87_00205
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013134022.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyl transferase
translation: MSDFFQNGVITTLQNVGNRSLESIEEELLHFSKRRNMVLLLPALYSEFETPAMQTIIDELKNVKYLYKIILGLDCATEEQFLEVKKRMSILECSVEVLWNDAPNMKKIYKELIDEGFPGLDTPGKGRNVWTMIGYGLTDQDNYAFALHDCDIVNYSRALVARLFYPIVHPGLDFEFNKGYYSRVTNKLHGRVTRLFYTPLIKALKITFGSNHYLEYMQNFRYALSGEFAFIRSLGRGIAISPTWGLEVSTLSEVYNNTSSRRICQTEIMKTYEHKHQDLGSKSEGDGIYKMANDIAKTLFRILAQEGVVFSEASFKTLLASYYQQSRIEISKYSALSKINALEYNRQNEISVVEAFEEAIKEAAAEFCEDPMGVASLSPWITVRSVLPGFSDRFRAMVKEESK
SIO_010081: CEP87_RS00205
subclass of: SO_0000673
so part of: CEP87_RS00205
location: 35637..36848
location: region:35637-36848:1
so has part: feature:35637-36848:1:exon

WP_011512361.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35637-36848:1:exon

CEP87_RS00210
type: Gene
subclass of: SO_0000704
RO_0002162: 330922
locus tag: CEP87_RS00210
old locus tag: CEP87_00210
so part of: sequence
location: 37476..37679
location: region:37476-37679:1
so has part: feature:37476-37679:1:exon
subclass of: SO_0000010

position:37476:1
position: 37476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37679:1
position: 37679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37476-37679:1:exon

CEP87_RS00210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 330922
locus tag: CEP87_RS00210
old locus tag: CEP87_00210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011512540.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CsbD family protein
translation: MNNQTLKGEWNQLKGSVKQKWADLTDDDLTHIEGDRDKLVGRIQERYGHSQEDAERDVDEWRNQNKY
SIO_010081: CEP87_RS00210
subclass of: SO_0000673
so part of: CEP87_RS00210
location: 37476..37679
location: region:37476-37679:1
so has part: feature:37476-37679:1:exon

WP_041753802.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37476-37679:1:exon

CEP87_RS00215
type: Gene
subclass of: SO_0000704
RO_0002162: 330922
locus tag: CEP87_RS00215
old locus tag: CEP87_00215
so part of: sequence
location: complement(37818..38813)
location: region:37818-38813:-1
so has part: feature:37818-38813:-1:exon
subclass of: SO_0000010

position:37818:-1
position: 37818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38813:-1
position: 38813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37818-38813:-1:exon

CEP87_RS00215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 330922
locus tag: CEP87_RS00215
old locus tag: CEP87_00215
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004827121.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphatase PAP2 family protein
translation: MISLISENQPLFALGFLIFLVVTVLLILQYAVIRYGQQLFTQAIRCWVRTKRSLAKNKRIILFRGKYPKLDVIMSRRFDLRDFYGLSLTFLWVVIGCMLVLFIALAEAVATLNSIVSIDYFISAQMSLLRDSDVVGFFVLITSFASTPIAVLVVLFVAVNCWVKQQRYIIVGLLIATLGSTAFTSLLKYLFQRERPANSLLVVQTYSFPSGHATTAMALYGFIAYLLIRFNQDFAQKIRIFTIAILFILLIGLSRVVLNQHYLSDVLGGYLVGAFWLTLGISITKWLSVKSKIIWKVEWSTSHAYMIWLSGLGVFISTLIYAKIYQFPMLS
SIO_010081: CEP87_RS00215
subclass of: SO_0000673
so part of: CEP87_RS00215
location: complement(37818..38813)
location: region:37818-38813:-1
so has part: feature:37818-38813:-1:exon

WP_011512363.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37818-38813:-1:exon

CEP87_RS00220
type: Gene
subclass of: SO_0000704
RO_0002162: 330922
locus tag: CEP87_RS00220
old locus tag: CEP87_00220
so part of: sequence
location: complement(39101..39424)
location: region:39101-39424:-1
so has part: feature:39101-39424:-1:exon
subclass of: SO_0000010

position:39101:-1
position: 39101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39424:-1
position: 39424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39101-39424:-1:exon

CEP87_RS00220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 330922
locus tag: CEP87_RS00220
old locus tag: CEP87_00220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011512364.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTSVPTKSLQNKLWIVFLVSFFGLSACSSETEEPAPNTESSEMTPVQTATEAEDQIPASTEDVEGAGGTAYYSSNGSVENDQKADDTVTVNENNSNLDQTPADGVQ
SIO_010081: CEP87_RS00220
subclass of: SO_0000673
so part of: CEP87_RS00220
location: complement(39101..39424)
location: region:39101-39424:-1
so has part: feature:39101-39424:-1:exon

WP_011512364.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39101-39424:-1:exon

CEP87_RS00230
type: Gene
subclass of: SO_0000704
RO_0002162: 330922
locus tag: CEP87_RS00230
old locus tag: CEP87_00230
so part of: sequence
location: 39811..40491
location: region:39811-40491:1
so has part: feature:39811-40491:1:exon
subclass of: SO_0000010

position:39811:1
position: 39811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40491:1
position: 40491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39811-40491:1:exon

CEP87_RS00230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 330922
locus tag: CEP87_RS00230
old locus tag: CEP87_00230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005176055.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF421 domain-containing protein
translation: MDWISIFIYDTTWAFAAEIVIRTTIMFCLIILLLRSTGKRGIRQLSIFELTIILALGSIAGDPMFTEDLPLIQAVLIMSLVLFLYRLFTWFSTKHKLFELLLEGKPTYIVENGMLIMEDVKKGKMSHDEFFAEMRQQGVRHLGQVEVGLLETDGEFSVLLFPHEDTQYGLPIFPKEFQATKTLKDGQLYACMHCGYVECISAPNEECNRCHHSRRWAKALNNKIVN
SIO_010081: CEP87_RS00230
subclass of: SO_0000673
so part of: CEP87_RS00230
location: 39811..40491
location: region:39811-40491:1
so has part: feature:39811-40491:1:exon

WP_041753800.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39811-40491:1:exon

CEP87_RS00235
type: Gene
subclass of: SO_0000704
RO_0002162: 330922
locus tag: CEP87_RS00235
old locus tag: CEP87_00235
so part of: sequence
location: complement(40488..40964)
location: region:40488-40964:-1
so has part: feature:40488-40964:-1:exon
subclass of: SO_0000010

position:40488:-1
position: 40488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40964:-1
position: 40964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40488-40964:-1:exon

CEP87_RS00235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 330922
locus tag: CEP87_RS00235
old locus tag: CEP87_00235
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020443875.1
GO function: GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nicotinamide-nucleotide amidohydrolase family protein
translation: MTNSCAKLLADKQLTIVFIESATAGYLAHRFSMSPYSGDILMGGLVCYDVAIKKNVLNISSQLIAECTPESLEVTKELVNKSKTMFDADLHVACTGLLKPGGSETEEKPVGTFFYCIGYKDELYDFRSICQGVPEQKLRSINSLICKSIIEVVNRHTD
SIO_010081: CEP87_RS00235
subclass of: SO_0000673
so part of: CEP87_RS00235
location: complement(40488..40964)
location: region:40488-40964:-1
so has part: feature:40488-40964:-1:exon

WP_105575660.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40488-40964:-1:exon